BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009052
(545 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/362 (92%), Positives = 341/362 (94%), Gaps = 3/362 (0%)
Query: 180 GFDMAPPASAMLAAGAGAAAA-GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
GFDMAPP SAML A AAA GQIPG PAIPGMFPNMFPL TGQQFG LPVMPVQAMT
Sbjct: 189 GFDMAPPPSAMLTGAAAVAAAAGQIPGTAPAIPGMFPNMFPLGTGQQFGTLPVMPVQAMT 248
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPPTANEQSVATFFS VMAAIGGNTAGPGDAVVNVYINHEKKFAFV
Sbjct: 249 QQATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 308
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL AVGLTPGS
Sbjct: 309 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGS 368
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS
Sbjct: 369 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 428
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE+VLLHAQQQIALQRLMLQP VP+
Sbjct: 429 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQETVLLHAQQQIALQRLMLQP--VPT 486
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFCSPTFCYKESGLIYTDRRLHNPQF 538
KVVCLTQVV+ADELKDD+EYE+ILEDMR EGGKFAFCS TFCYKESGL YTDRR H P F
Sbjct: 487 KVVCLTQVVTADELKDDDEYEDILEDMRTEGGKFAFCSATFCYKESGLTYTDRRHHYPLF 546
Query: 539 VY 540
++
Sbjct: 547 IF 548
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/524 (76%), Positives = 436/524 (83%), Gaps = 24/524 (4%)
Query: 4 YEVNGEDVDNNNNNNNNNYEYGSSPQPRSA-----DDHSDSKPQHGSRDYERESSRSREK 58
YE NGED DN Y G SPQ R+A D H+DSK QHGSRDYERESS+SREK
Sbjct: 8 YEGNGEDADN--------YGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREK 59
Query: 59 EKEKGRDRDRDRDRDRTREKDRDREK-----SRDMDREKSRDREKDREKDRHHRDRHRER 113
E++KGRDR+R+RDRDR R++DR++ K + H
Sbjct: 60 ERDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRD 119
Query: 114 SRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRS 173
ER E + RDDDD+YR RDYDRR+DYD++REDRH+RRS+SRS+G EHRSRS S +RS
Sbjct: 120 RGERREGGRSRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRS 179
Query: 174 KSKRIS----GFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGAL 229
+S+ S GFDMAPP +A+L+ AAAGQIPG PAIPGMFP MFPL TGQ FGAL
Sbjct: 180 RSRSKSKRISGFDMAPPTTAILSGAT--AAAGQIPGTTPAIPGMFPTMFPLATGQPFGAL 237
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI
Sbjct: 238 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 297
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL
Sbjct: 298 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 357
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGY
Sbjct: 358 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 417
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ+L
Sbjct: 418 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKL 477
Query: 470 MLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
MLQPG+V +KV+CLTQVV+ +EL +DE+YE+I+EDMR EGGKF
Sbjct: 478 MLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG 521
>gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661288|gb|AEE86688.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 565
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/537 (68%), Positives = 422/537 (78%), Gaps = 16/537 (2%)
Query: 9 EDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDR 68
ED + N + Y+ + + +D DSKP+ SRD+ERE+SRS+++E+EKGRD+DR
Sbjct: 5 EDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDR 64
Query: 69 DRDRDRTR-EKDRDREKSRDMDREKSRDREKDREKDRHHRD-RHRERSRERSERRKDRDD 126
+RD + +R +DRD EKS+ E+SRD+++D ++RHHR RHR+ SRER ERR+
Sbjct: 65 ERDSEVSRRSRDRDGEKSK----ERSRDKDRDH-RERHHRSSRHRDHSRERGERRERGGR 119
Query: 127 DDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPP 186
DD R DR D RD + R R +R+SGFDMAPP
Sbjct: 120 DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPP 179
Query: 187 ASAMLAAGAGAAAAGQIPGANPAIPG--MFPNMFPLVTGQQFGALPVMPVQAMTQQATRH 244
ASA AGAA GQ+P A P +PG MFPNMFPL TGQ FG L +MP+QAMTQQATRH
Sbjct: 180 ASA--MLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRH 237
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
Sbjct: 238 ARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 297
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
EASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEG
Sbjct: 298 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEG 357
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
PDRIFVGGLPYYFTE+Q+RELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIAC
Sbjct: 358 PDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 417
Query: 425 AALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLT 484
AALNGIKMGDKTLTVRRANQG KPEQE+VLLHAQQQIA QR+MLQPG+V + VVCLT
Sbjct: 418 AALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLT 477
Query: 485 QVVSADELKDDEEYEEILEDMRQEGGKFAFCSPTFCYKESGLIYTDRRLHNPQFVYF 541
QVV+ DEL+DDEEY +I+EDMRQEGGKFA FCYKES L YTDRRLH P ++
Sbjct: 478 QVVTEDELRDDEEYGDIMEDMRQEGGKFA-----FCYKESALTYTDRRLHKPPNLFI 529
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/526 (76%), Positives = 435/526 (82%), Gaps = 28/526 (5%)
Query: 4 YEVNGEDVDNNNNNNNNNYEYGSSPQPRSA-----DDHSDSKPQHGSRDYERESSRSREK 58
YE NGED DN Y G SPQ R+A D H+DSK QHGSRDYERESS+SRE
Sbjct: 8 YEGNGEDADN--------YGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSRE- 58
Query: 59 EKEKGRDRDRDRDRDRTREKDRDREKSRD-------MDREKSRDREKDREKDRHHRDRHR 111
KE+ + RDR+R+RDR R +DRDREKS+D + H
Sbjct: 59 -KERDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRH 117
Query: 112 ERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRS 171
ER E + RDDDD+YR RDYDRR+DYD++REDRH+RRS+SRS+G EHRSRS S +
Sbjct: 118 RDRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPT 177
Query: 172 RSKSKRIS----GFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFG 227
RS+S+ S GFDMAPP +A+L+ AAAGQIPG PAIPGMFP MFPL TGQ FG
Sbjct: 178 RSRSRSKSKRISGFDMAPPTTAILSGAT--AAAGQIPGTTPAIPGMFPTMFPLATGQPFG 235
Query: 228 ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV 287
ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV
Sbjct: 236 ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV 295
Query: 288 YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL 347
YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL
Sbjct: 296 YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL 355
Query: 348 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSK
Sbjct: 356 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 415
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ
Sbjct: 416 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 475
Query: 468 RLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+LMLQPG+V +KV+CLTQVV+ +EL +DE+YE+I+EDMR EGGKF
Sbjct: 476 KLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG 521
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/517 (73%), Positives = 420/517 (81%), Gaps = 37/517 (7%)
Query: 1 MADYEVNGEDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYE--RESSRSREK 58
M + E NGED++NNN SSP +SDSK Q S D E R+SSRSREK
Sbjct: 2 MQENEGNGEDIENNNR---------SSP-------YSDSKSQRTSHDPEKDRDSSRSREK 45
Query: 59 EKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERS 118
E+EKGR++D DRDR+R R++DR +E+ +D RDRE++REKDR R R R R
Sbjct: 46 EREKGREKDHDRDRNRDRDRDRVKERDKD------RDREREREKDRDRHHRDRHRDRSDR 99
Query: 119 ERRKDRDDDDHY-RSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
R D+D R+RDYDRR++ D+DREDRH R + R+RSRSRS SKSKR
Sbjct: 100 RERSRDRDEDDLPRTRDYDRRRNNDKDREDRH--------RHKPSSRARSRSRSPSKSKR 151
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPG-ANPAIPGMFPNMFPLVTGQQFGALPVMPVQA 236
ISGFDMAPP SA+L+ A GQ+PG NP+IPGMF NMFP+ GQ FGALPVMPVQA
Sbjct: 152 ISGFDMAPPTSALLSGATDVA--GQVPGITNPSIPGMFSNMFPVAAGQ-FGALPVMPVQA 208
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
MTQQATRHARRVYVGGLPPTANEQSVATFFS VM AIGGNTAGPGDAVVNVYINHEKKFA
Sbjct: 209 MTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFA 268
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
FVEMRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAATLGPSQP+PNLNLAAVGLTP
Sbjct: 269 FVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTP 328
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
GS+GGLEGPDRIFVGGLPYYFTE+QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD
Sbjct: 329 GSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQD 388
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
+SVTDIACAALNGIKMGDKTLTVRRANQG QP PEQESVLLHAQQQIALQR MLQPG++
Sbjct: 389 VSVTDIACAALNGIKMGDKTLTVRRANQGITQPNPEQESVLLHAQQQIALQRFMLQPGAL 448
Query: 477 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+K++CLTQVVS DELKDD++Y++ILEDMR E GKF
Sbjct: 449 ATKILCLTQVVSVDELKDDDDYQDILEDMRIECGKFG 485
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/517 (73%), Positives = 420/517 (81%), Gaps = 37/517 (7%)
Query: 1 MADYEVNGEDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYE--RESSRSREK 58
M + E NGED++NNN SSP +SDSK Q S D E R+SSRSREK
Sbjct: 1 MQENEGNGEDIENNNR---------SSP-------YSDSKSQRTSHDPEKDRDSSRSREK 44
Query: 59 EKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERS 118
E+EKGR++D DRDR+R R++DR +E+ +D RDRE++REKDR R R R R
Sbjct: 45 EREKGREKDHDRDRNRDRDRDRVKERDKD------RDREREREKDRDRHHRDRHRDRSDR 98
Query: 119 ERRKDRDDDDHY-RSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
R D+D R+RDYDRR++ D+DREDRH R + R+RSRSRS SKSKR
Sbjct: 99 RERSRDRDEDDLPRTRDYDRRRNNDKDREDRH--------RHKPSSRARSRSRSPSKSKR 150
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPG-ANPAIPGMFPNMFPLVTGQQFGALPVMPVQA 236
ISGFDMAPP SA+L+ A GQ+PG NP+IPGMF NMFP+ GQ FGALPVMPVQA
Sbjct: 151 ISGFDMAPPTSALLSGATDVA--GQVPGITNPSIPGMFSNMFPVAAGQ-FGALPVMPVQA 207
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
MTQQATRHARRVYVGGLPPTANEQSVATFFS VM AIGGNTAGPGDAVVNVYINHEKKFA
Sbjct: 208 MTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFA 267
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
FVEMRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAATLGPSQP+PNLNLAAVGLTP
Sbjct: 268 FVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTP 327
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
GS+GGLEGPDRIFVGGLPYYFTE+QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD
Sbjct: 328 GSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQD 387
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
+SVTDIACAALNGIKMGDKTLTVRRANQG QP PEQESVLLHAQQQIALQR MLQPG++
Sbjct: 388 VSVTDIACAALNGIKMGDKTLTVRRANQGITQPNPEQESVLLHAQQQIALQRFMLQPGAL 447
Query: 477 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+K++CLTQVVS DELKDD++Y++ILEDMR E GKF
Sbjct: 448 ATKILCLTQVVSVDELKDDDDYQDILEDMRIECGKFG 484
>gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana]
Length = 565
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/536 (68%), Positives = 419/536 (78%), Gaps = 14/536 (2%)
Query: 9 EDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDR 68
ED + N + Y+ + + +D DSKP+ SRD+ERE+SRS+++E+EKGRD+DR
Sbjct: 5 EDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDR 64
Query: 69 DRDRDRTR-EKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDD 127
+RD + +R +DRD EKS+ E+SRD+++D + H RHR+RSRER ERR+ D
Sbjct: 65 ERDSEVSRRSRDRDGEKSK----ERSRDKDRDHRERHHRSSRHRDRSRERGERRERGGRD 120
Query: 128 DHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPA 187
D R DR D RD + R R +R+SGFDMAPPA
Sbjct: 121 DDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPA 180
Query: 188 SAMLAAGAGAAAAGQIPGANPAIPG--MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHA 245
SA AGAA GQ+P A P +PG MFPNMFPL TGQ FG L +MP+QAMTQQATRHA
Sbjct: 181 SA--MLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHA 238
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEE 305
RRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEE
Sbjct: 239 RRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEE 298
Query: 306 ASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGP 365
ASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGP
Sbjct: 299 ASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGP 358
Query: 366 DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 425
DRIFVGGLPYYFTE+Q+RELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACA
Sbjct: 359 DRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 418
Query: 426 ALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQ 485
ALNGIKMGDKTLTVRRANQG KPEQE+VLLHAQQQIA QR+MLQPG+V + VVCLTQ
Sbjct: 419 ALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQ 478
Query: 486 VVSADELKDDEEYEEILEDMRQEGGKFAFCSPTFCYKESGLIYTDRRLHNPQFVYF 541
VV+ DEL+DDEEY +I+EDMRQEGG+FA FCYKES L YTDRRLH P ++
Sbjct: 479 VVTEDELRDDEEYGDIMEDMRQEGGRFA-----FCYKESALTYTDRRLHKPPNLFI 529
>gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
gi|297312833|gb|EFH43256.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/483 (74%), Positives = 403/483 (83%), Gaps = 15/483 (3%)
Query: 34 DDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKS 93
+D DSKP+ SRD+ERE+SRS+++E+EKGRDRDR+RD + +R R + RD ++ K
Sbjct: 30 EDQLDSKPKRDSRDHERETSRSKDREREKGRDRDRERDSEVSR-----RSRDRDGEKGKE 84
Query: 94 RDREKDREKDRHHRD-RHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRR 152
R REKDR+++RHHR RHR+ SR+RSERR+ DD R DR D RD + R
Sbjct: 85 RSREKDRDRERHHRSSRHRDHSRDRSERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRIR 144
Query: 153 SQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPG 212
RS S+S +KR+SGFDMAPPASAMLAAGA A GQ+P A P +PG
Sbjct: 145 RSRSRSKDRSERSPSKS-----NKRVSGFDMAPPASAMLAAGA--AVTGQVPPAPPTLPG 197
Query: 213 --MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVM 270
MFPNMFPL TGQ FG L +MP+QAMTQQATRHARRVYVGGL PTANEQSVATFFSQVM
Sbjct: 198 AGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVM 257
Query: 271 AAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY 330
AA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDY
Sbjct: 258 AAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDY 317
Query: 331 NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFG 390
NPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE+Q+RELLESFG
Sbjct: 318 NPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFG 377
Query: 391 PLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK 450
L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG QPK
Sbjct: 378 ALKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMQPK 437
Query: 451 PEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
PEQESVLLHAQQQIA QR+MLQPG + + VVCLTQVV+ DEL+DDEEYE+I+EDMRQEGG
Sbjct: 438 PEQESVLLHAQQQIAFQRIMLQPGVMATTVVCLTQVVTEDELRDDEEYEDIMEDMRQEGG 497
Query: 511 KFA 513
KF
Sbjct: 498 KFG 500
>gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|19310597|gb|AAL85029.1| putative splicing factor [Arabidopsis thaliana]
gi|332661289|gb|AEE86689.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 542
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/539 (66%), Positives = 414/539 (76%), Gaps = 12/539 (2%)
Query: 9 EDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDR 68
ED + N + Y+ + + +D DSKP+ SRD+ERE+SRS+++E+EKGRD+DR
Sbjct: 5 EDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDR 64
Query: 69 DRDRDRTR-EKDRDREKSRDMDREKSRDREKDREKDRHHRD-RHRERSRERSERRKDRDD 126
+RD + +R +DRD EKS+ E+SRD+++D ++RHHR RHR+ SRER ERR+
Sbjct: 65 ERDSEVSRRSRDRDGEKSK----ERSRDKDRD-HRERHHRSSRHRDHSRERGERRERGGR 119
Query: 127 DDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPP 186
DD R DR D RD + R R +R+SGFDMAPP
Sbjct: 120 DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPP 179
Query: 187 ASAMLAAGAGAAAAGQIPGANPAIPG--MFPNMFPLVTGQQFGALPVMPVQAMTQQATRH 244
ASA AGAA GQ+P A P +PG MFPNMFPL TGQ FG L +MP+QAMTQQATRH
Sbjct: 180 ASA--MLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRH 237
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
Sbjct: 238 ARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 297
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
EASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEG
Sbjct: 298 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEG 357
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
PDRIFVGGLPYYFTE+Q+RELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIAC
Sbjct: 358 PDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 417
Query: 425 AALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLT 484
AALNGIKMGDKTLTVRRANQG KPEQE+VLLHAQQQIA QR+MLQPG+V + VVCLT
Sbjct: 418 AALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLT 477
Query: 485 QVVSADELKDDEEYEEILEDMRQEGGKFAFCSPTFCYKESGLIYTDRRLHNPQFVYFYI 543
QVV+ DEL+DDEEY +I+EDMRQEGGKF P C S L Y + + V+ +
Sbjct: 478 QVVTEDELRDDEEYGDIMEDMRQEGGKFG-KRPLNCAIWSILKYKIKSILICLSVFLVV 535
>gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661290|gb|AEE86690.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 551
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/507 (68%), Positives = 395/507 (77%), Gaps = 29/507 (5%)
Query: 9 EDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDR 68
ED + N + Y+ + + +D DSKP+ SRD+ERE+SRS+++E+EKGRD+DR
Sbjct: 5 EDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDR 64
Query: 69 DRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDD 128
+RD + +R +SRD D EKS++R +D KDR HR+RH SR
Sbjct: 65 ERDSEVSR-------RSRDRDGEKSKERSRD--KDRDHRERHHRSSRH------------ 103
Query: 129 HYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPAS 188
RD+ R + R+R + R R +R+SGFDMAPPAS
Sbjct: 104 ----RDHSRERGERRERGGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPAS 159
Query: 189 AMLAAGAGAAAAGQIPGANPAIP--GMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHAR 246
AMLA AGAA GQ+P A P +P GMFPNMFPL TGQ FG L +MP+QAMTQQATRHAR
Sbjct: 160 AMLA--AGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHAR 217
Query: 247 RVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 306
RVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA
Sbjct: 218 RVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 277
Query: 307 SNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPD 366
SNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEGPD
Sbjct: 278 SNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPD 337
Query: 367 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 426
RIFVGGLPYYFTE+Q+RELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA
Sbjct: 338 RIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 397
Query: 427 LNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQV 486
LNGIKMGDKTLTVRRANQG KPEQE+VLLHAQQQIA QR+MLQPG+V + VVCLTQV
Sbjct: 398 LNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQV 457
Query: 487 VSADELKDDEEYEEILEDMRQEGGKFA 513
V+ DEL+DDEEY +I+EDMRQEGGKF
Sbjct: 458 VTEDELRDDEEYGDIMEDMRQEGGKFG 484
>gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|75318082|sp|O23212.2|U2A2A_ARATH RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|18087531|gb|AAL58899.1|AF462805_1 At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|4006898|emb|CAB16828.1| splicing factor-like protein [Arabidopsis thaliana]
gi|7270617|emb|CAB80335.1| splicing factor-like protein [Arabidopsis thaliana]
gi|23506119|gb|AAN28919.1| At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|24030414|gb|AAN41365.1| putative splicing factor [Arabidopsis thaliana]
gi|332661287|gb|AEE86687.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 573
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/509 (69%), Positives = 407/509 (79%), Gaps = 11/509 (2%)
Query: 9 EDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDR 68
ED + N + Y+ + + +D DSKP+ SRD+ERE+SRS+++E+EKGRD+DR
Sbjct: 5 EDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDR 64
Query: 69 DRDRDRTR-EKDRDREKSRDMDREKSRDREKDREKDRHHRD-RHRERSRERSERRKDRDD 126
+RD + +R +DRD EKS+ E+SRD+++D ++RHHR RHR+ SRER ERR+
Sbjct: 65 ERDSEVSRRSRDRDGEKSK----ERSRDKDRDH-RERHHRSSRHRDHSRERGERRERGGR 119
Query: 127 DDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPP 186
DD R DR D RD + R R +R+SGFDMAPP
Sbjct: 120 DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPP 179
Query: 187 ASAMLAAGAGAAAAGQIPGANPAIPG--MFPNMFPLVTGQQFGALPVMPVQAMTQQATRH 244
ASAMLAAGA A GQ+P A P +PG MFPNMFPL TGQ FG L +MP+QAMTQQATRH
Sbjct: 180 ASAMLAAGA--AVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRH 237
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
Sbjct: 238 ARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 297
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
EASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P+LNLAAVGLTPG++GGLEG
Sbjct: 298 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEG 357
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
PDRIFVGGLPYYFTE+Q+RELLESFG L+GFDLVKDRETGNSKGYAFCVYQDLSVTDIAC
Sbjct: 358 PDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 417
Query: 425 AALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLT 484
AALNGIKMGDKTLTVRRANQG KPEQE+VLLHAQQQIA QR+MLQPG+V + VVCLT
Sbjct: 418 AALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLT 477
Query: 485 QVVSADELKDDEEYEEILEDMRQEGGKFA 513
QVV+ DEL+DDEEY +I+EDMRQEGGKF
Sbjct: 478 QVVTEDELRDDEEYGDIMEDMRQEGGKFG 506
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 371/519 (71%), Positives = 410/519 (78%), Gaps = 19/519 (3%)
Query: 1 MADYEVNGEDVDNNNNNNNNNYE----YGSSPQPRSADDHSDSKPQHGSRDYE--RESSR 54
M DYE NGED+DN ++ + +G P P DD+SDSK QH SR+ E R+SSR
Sbjct: 1 MPDYEGNGEDIDNYTGGSSPPPKSRSSHGHGPTP---DDYSDSKSQHSSRENEKDRDSSR 57
Query: 55 SREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERS 114
SREK++E+ + H
Sbjct: 58 SREKDRER-----GRDKDRDRDRDRDRGRDRDRGRDRDKDREREKDRDRHHGDRHRDRSD 112
Query: 115 RERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
R ER +DRDDDD +R+RDYD+++++ +DRE RH+ RS+SR R SEHRSRSRSRSRSK
Sbjct: 113 RREKERTRDRDDDDRHRTRDYDQQREHAKDRESRHRHRSRSRGR--SEHRSRSRSRSRSK 170
Query: 175 SKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPV 234
SKRISGFDMAPP SAML AAAGQ+PG NP IPGMFPNMFPL +GQ FGALPVMP+
Sbjct: 171 SKRISGFDMAPPTSAMLPGIT--AAAGQVPGTNPPIPGMFPNMFPLASGQ-FGALPVMPI 227
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
QAMTQQATRHARRVYVGGLP ANEQSVATFFS VM+AIGGNTAGPGDAVVNVYIN+EKK
Sbjct: 228 QAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKK 287
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
FAFVEMRSVEEASNAMALDGIIFEGAP KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL
Sbjct: 288 FAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 347
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
+PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 348 SPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 407
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPG 474
QD+SVTDIACAALNGIKMGDKTLTVRRANQG QPKPEQESVLLHAQQQIALQRLMLQP
Sbjct: 408 QDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPA 467
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++ +KV+ LT+V+SADEL DDE+Y++ILEDMR E GKF
Sbjct: 468 TLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFG 506
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 363/490 (74%), Positives = 391/490 (79%), Gaps = 34/490 (6%)
Query: 42 QHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDRE 101
QHGSRDYERESS KGR+++R RD DR R++DRDR++ RD DREKSR R+++R+
Sbjct: 5 QHGSRDYERESS--------KGREKERSRDSDRDRDRDRDRKRDRDKDREKSRGRDRERD 56
Query: 102 KDRHHRDR---HRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSR 158
+D+ HR+ S R R DDD + RR + +
Sbjct: 57 RDKDSDRHRDRHRDCSERRDRGRDRDDDDYYRSRDYDRRRDYDRDSEDRHRRLSRSRSKG 116
Query: 159 GRSEHRSRSRSRSRSKSKRISGFDMAPPASAML---------AAGAGAAAAGQIPGANPA 209
RSEHRS SKR+SGFDMAPP+SA+L AA A AAA+GQI G P
Sbjct: 117 -RSEHRS---------SKRMSGFDMAPPSSAILPNAAAAAAAAAAASAAASGQIAGTTPP 166
Query: 210 IPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQV 269
IPGMFPNMFPL T QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQV
Sbjct: 167 IPGMFPNMFPLGTSQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQV 226
Query: 270 MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD 329
MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD
Sbjct: 227 MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD 286
Query: 330 YNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESF 389
YNPSLAATLGPSQPNPNLNL+AVGL PGSAGGLEGPDRIFVGGLPYYFTE+QIRELLESF
Sbjct: 287 YNPSLAATLGPSQPNPNLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESF 346
Query: 390 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQP 449
GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQP
Sbjct: 347 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQP 406
Query: 450 KPEQESVLLHAQQQIALQRLML----QPGSVPSKVVCLTQVVSADELKDDEEYEEILEDM 505
KPEQE+VLLHAQQQIALQRLML Q VP+KVVCLTQVV+ DELKDD+EYE+ILEDM
Sbjct: 407 KPEQENVLLHAQQQIALQRLMLQPQPQQQPVPTKVVCLTQVVTGDELKDDDEYEDILEDM 466
Query: 506 RQEGGKFAFC 515
R E GKF
Sbjct: 467 RTEAGKFGLL 476
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 311/338 (92%), Positives = 323/338 (95%), Gaps = 3/338 (0%)
Query: 176 KRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQ 235
KR+SGFDMAPPASAMLA A AAAGQIPG P IPGMFPNMFPL +GQ FGALPVMPVQ
Sbjct: 164 KRVSGFDMAPPASAMLAGAA--AAAGQIPGTTPTIPGMFPNMFPLASGQ-FGALPVMPVQ 220
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
AMTQQATRHARRVYVGGL PTANEQSVATFFSQVM+AIGGNTAGPGDAVVNVYINHEKKF
Sbjct: 221 AMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKF 280
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT
Sbjct: 281 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 340
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 341 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 400
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS 475
DLSVTDIACAALNGIKMGDKTLTVRRANQGA+QPKPEQE+VLLHAQQQIALQRLM QPG+
Sbjct: 401 DLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPGA 460
Query: 476 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ +KVVCLTQVV+ADEL+DDE YE+I+EDMR EGGKF
Sbjct: 461 LATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFG 498
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/356 (88%), Positives = 329/356 (92%), Gaps = 6/356 (1%)
Query: 162 EHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLV 221
EHRSRSRSRSRSKSKR SGFDMAPPASAML + A AGQI GANP IPGMFPNMFPL
Sbjct: 180 EHRSRSRSRSRSKSKRTSGFDMAPPASAMLTGAS--AVAGQITGANPTIPGMFPNMFPLA 237
Query: 222 TGQ--QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG 279
T Q QF ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA IGGNTAG
Sbjct: 238 TSQMQQFSALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAG 297
Query: 280 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 339
PGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAATLG
Sbjct: 298 PGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLG 357
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
PSQPNPNLNL AVGLTPGSAGGL+GPDR+FVGGLPYYFTE QIRELLE+FGPLRGFDLVK
Sbjct: 358 PSQPNPNLNLGAVGLTPGSAGGLDGPDRVFVGGLPYYFTETQIRELLETFGPLRGFDLVK 417
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESVL 457
DRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQGAN QPKPEQES+L
Sbjct: 418 DRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQGANPQQPKPEQESIL 477
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+HAQQQIALQ+LMLQP V +KVVCLT VS+DELKDDE+YEEIL+DMRQE KF
Sbjct: 478 MHAQQQIALQKLMLQPALVATKVVCLTHAVSSDELKDDEDYEEILDDMRQECSKFG 533
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 316/356 (88%), Positives = 330/356 (92%), Gaps = 6/356 (1%)
Query: 162 EHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLV 221
EHRSRSRSRSRSKSKR SGFDMAPPASAMLA + A AGQI GANP IPGMFPNMFPL
Sbjct: 185 EHRSRSRSRSRSKSKRTSGFDMAPPASAMLAGAS--AVAGQITGANPTIPGMFPNMFPLA 242
Query: 222 TGQ--QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG 279
T Q QF ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA IGGNTAG
Sbjct: 243 TNQMQQFSALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAG 302
Query: 280 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 339
PGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAATLG
Sbjct: 303 PGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLG 362
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
PSQPNPNLNL AVGLTPGSAGGL+GPDRIFVGGLPYYFTE QIRELLE+FGPLRGFDLVK
Sbjct: 363 PSQPNPNLNLGAVGLTPGSAGGLDGPDRIFVGGLPYYFTETQIRELLETFGPLRGFDLVK 422
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESVL 457
DRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQGAN QPKPEQES+L
Sbjct: 423 DRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQGANPQQPKPEQESIL 482
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+HAQQQIALQ+LMLQP V +KVVCLT VS+DELKDDE+Y+EIL+DMRQE KF
Sbjct: 483 MHAQQQIALQKLMLQPALVATKVVCLTHAVSSDELKDDEDYDEILDDMRQECSKFG 538
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 310/339 (91%), Positives = 322/339 (94%), Gaps = 2/339 (0%)
Query: 176 KRISGFDMAPPASAMLAAGAGAA-AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPV 234
KR+SGFDMAPPASAMLA A AA GQIPG P IPGMFPNMFPL +GQ FGALPVMPV
Sbjct: 164 KRVSGFDMAPPASAMLAGAAAAADFTGQIPGTTPTIPGMFPNMFPLASGQ-FGALPVMPV 222
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
QAMTQQATRHARRVYVGGL PTANEQSVATFFSQVM+AIGGNTAGPGDAVVNVYINHEKK
Sbjct: 223 QAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKK 282
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL
Sbjct: 283 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 342
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY
Sbjct: 343 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 402
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPG 474
QDLSVTDIACAALNGIKMGDKTLTVRRANQGA+QPKPEQE+VLLHAQQQIALQRLM QPG
Sbjct: 403 QDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPG 462
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++ +KVVCLTQVV+ADEL+DDE YE+I+EDMR EGGKF
Sbjct: 463 ALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFG 501
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 315/367 (85%), Positives = 336/367 (91%), Gaps = 6/367 (1%)
Query: 151 RRSQSRSR-GRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPA 209
+R +SRSR GR+EHRSRSRSRSRSK + SGFDMAPP + ++ GA + Q+ GA PA
Sbjct: 146 QRHRSRSREGRAEHRSRSRSRSRSKKRI-SGFDMAPPTNPLMT---GATSLPQVTGAAPA 201
Query: 210 IPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQV 269
+PG+FPNMF L TGQ GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS V
Sbjct: 202 VPGVFPNMFSLPTGQ-LGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHV 260
Query: 270 MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD 329
M+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD
Sbjct: 261 MSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD 320
Query: 330 YNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESF 389
YNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QIRELLESF
Sbjct: 321 YNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEGQIRELLESF 380
Query: 390 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQP 449
GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG QP
Sbjct: 381 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGVTQP 440
Query: 450 KPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
KPEQESVLLHAQQQIALQ+LMLQPG++ +KV+CLTQVVSADEL+DDE+Y +ILEDMR E
Sbjct: 441 KPEQESVLLHAQQQIALQKLMLQPGTLATKVLCLTQVVSADELRDDEDYADILEDMRLEC 500
Query: 510 GKFAFCS 516
GKF +
Sbjct: 501 GKFTLVN 507
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/336 (86%), Positives = 309/336 (91%), Gaps = 3/336 (0%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
ISGFDMAPP SA+L GQ+PGANP+IPGMF NMFPL GQ FGALP+MPVQAM
Sbjct: 152 ISGFDMAPPTSALLPGATDVT--GQVPGANPSIPGMFSNMFPLAAGQ-FGALPIMPVQAM 208
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
TQQATRHARRVYVGGLPPTANEQSVATFFS VM AIGGNTAGPGDAVVNVYINHEKKFAF
Sbjct: 209 TQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAF 268
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
VEMRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAATLGPSQP+PNLNLAAVGLTPG
Sbjct: 269 VEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPG 328
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
S+GGLEGPDRIFVGGLPYYFTE+QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+
Sbjct: 329 SSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDV 388
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
SVTDIACAALNGIKMGDKTLTVRRANQG NQP PEQESVLLHAQQQIALQR MLQPG++
Sbjct: 389 SVTDIACAALNGIKMGDKTLTVRRANQGTNQPNPEQESVLLHAQQQIALQRFMLQPGALA 448
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+KV+CLTQVVS DEL DD++Y++ILEDMR E GKF
Sbjct: 449 TKVLCLTQVVSVDELNDDDDYQDILEDMRVECGKFG 484
>gi|297735185|emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 293/319 (91%), Positives = 304/319 (95%), Gaps = 1/319 (0%)
Query: 195 AGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLP 254
A A GQIPG P IPGMFPNMFPL +GQ FGALPVMPVQAMTQQATRHARRVYVGGL
Sbjct: 9 ASIACFGQIPGTTPTIPGMFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLS 67
Query: 255 PTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG 314
PTANEQSVATFFSQVM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG
Sbjct: 68 PTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG 127
Query: 315 IIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLP 374
IIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLP
Sbjct: 128 IIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLP 187
Query: 375 YYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGD 434
YYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGD
Sbjct: 188 YYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGD 247
Query: 435 KTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKD 494
KTLTVRRANQGA+QPKPEQE+VLLHAQQQIALQRLM QPG++ +KVVCLTQVV+ADEL+D
Sbjct: 248 KTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNADELQD 307
Query: 495 DEEYEEILEDMRQEGGKFA 513
DE YE+I+EDMR EGGKF
Sbjct: 308 DEAYEDIVEDMRIEGGKFG 326
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 290/337 (86%), Positives = 310/337 (91%), Gaps = 4/337 (1%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGA-NPAIPGMFPNMFPLVTGQQFGALPVMPVQA 236
ISGFDMAPP SA+L+ A GQ+PG NP+IPGMF NMFPL GQ FGALP+MPVQA
Sbjct: 158 ISGFDMAPPTSALLSGATDVA--GQVPGTTNPSIPGMFSNMFPLAAGQ-FGALPIMPVQA 214
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
MTQQATRHARRVYVGGLPPTANEQSVATFFS VM AIGGNTAGPGDAVVNVYINHEKKFA
Sbjct: 215 MTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFA 274
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
FVEMRSVEEASNAMALDG++FEG PVKVRRPSDYNPSLAATLGPSQP+PNLNLAAVGLTP
Sbjct: 275 FVEMRSVEEASNAMALDGVVFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTP 334
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
GS+GGLEGPDRIFVGGLPYYFTE+QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD
Sbjct: 335 GSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQD 394
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
+SVTDIACAALNGIKMGDKTLTVRRANQG QP PEQESVLLHAQQQIALQR MLQPG++
Sbjct: 395 VSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGAL 454
Query: 477 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+KV+CLT+VVS DELKDD++Y++ILEDMR E GKF
Sbjct: 455 ATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFG 491
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/341 (84%), Positives = 307/341 (90%), Gaps = 6/341 (1%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
SGFDMAPP SA+L A AGQI GA+PAIPGMFPNMFPL T Q F ALPV+PVQAMT
Sbjct: 224 SGFDMAPPTSAILGA---TGVAGQITGASPAIPGMFPNMFPLPTNQPFSALPVLPVQAMT 280
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGL PTANEQSVATFFSQVMA IGGNTAGPGDAVVNVYINH+KKFAFV
Sbjct: 281 QQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFV 340
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNL VGL+PGS
Sbjct: 341 EMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGS 400
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
AGGL+GPDRIFVGG+PYYFTE QIRELLE+FGPLRGFDLVKDRETGNSKGYAFCVYQDL+
Sbjct: 401 AGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLA 460
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESVLLHAQQQIALQRLMLQPGSV 476
VTDIACAALNGIKMGDKTLTVRRANQ N QPKPEQES+L+HAQQQIALQ+LMLQP V
Sbjct: 461 VTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQKLMLQPALV 520
Query: 477 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA-FCS 516
+KV+CLT VS DELKDDE+YEEIL+DMRQE KF C+
Sbjct: 521 ATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNICN 561
>gi|224094725|ref|XP_002310209.1| predicted protein [Populus trichocarpa]
gi|222853112|gb|EEE90659.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 290/311 (93%), Positives = 296/311 (95%)
Query: 203 IPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV 262
I G P IPGMFPNMFPL TGQQFGALPVMPVQAMTQQATRHARRVYVGGLPP ANEQSV
Sbjct: 17 ITGTTPPIPGMFPNMFPLGTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPIANEQSV 76
Query: 263 ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 322
ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV
Sbjct: 77 ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 136
Query: 323 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 382
KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI
Sbjct: 137 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 196
Query: 383 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
RELLESFG LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA
Sbjct: 197 RELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 256
Query: 443 NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEIL 502
NQG NQPKPEQE+VLLHAQQQIALQRLMLQP V +KVVCLTQVV+ DELKDD+EYE+IL
Sbjct: 257 NQGTNQPKPEQENVLLHAQQQIALQRLMLQPPPVVTKVVCLTQVVTVDELKDDDEYEDIL 316
Query: 503 EDMRQEGGKFA 513
ED+R E GKF
Sbjct: 317 EDIRMEAGKFG 327
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/336 (85%), Positives = 308/336 (91%), Gaps = 3/336 (0%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
ISGFDMAPP SA+L A GQ+PGA+P+IPGMF NMFPL +GQ FGALPVMP+QAM
Sbjct: 161 ISGFDMAPPTSALLPGATDTA--GQVPGASPSIPGMFSNMFPLTSGQ-FGALPVMPIQAM 217
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
TQQATRHARRVYVGGLPP+ANEQSVATFFS VM AIGGNTAGPGDAVVNVYINHEKKFAF
Sbjct: 218 TQQATRHARRVYVGGLPPSANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAF 277
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
VEMRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAATLGPSQP+PNLNLAAVGLTPG
Sbjct: 278 VEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPG 337
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
S+GGLEGPDRIFVGGLPYYFTE+QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+
Sbjct: 338 SSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDV 397
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
SVTDIACAALNGIKMGDKTLTVRRANQG QP PEQESVLLHAQQQIALQ+ M QPG++
Sbjct: 398 SVTDIACAALNGIKMGDKTLTVRRANQGTPQPNPEQESVLLHAQQQIALQKFMFQPGALA 457
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+KV+CLTQ VS DEL DD++Y++ILEDMR E GKF
Sbjct: 458 TKVLCLTQAVSVDELNDDDDYQDILEDMRTECGKFG 493
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 305/357 (85%), Positives = 327/357 (91%), Gaps = 3/357 (0%)
Query: 157 SRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPN 216
SRGRSEHRS+SRSRS SKSKRISGFDMAPP +A+L AA GQ+PG NPAIPG+F N
Sbjct: 135 SRGRSEHRSKSRSRSPSKSKRISGFDMAPPTTALLPGATDAA--GQVPGTNPAIPGLFSN 192
Query: 217 MFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN 276
MFPL + QFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS VM AIGGN
Sbjct: 193 MFPLAS-SQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGN 251
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA 336
TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAA
Sbjct: 252 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAA 311
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
TLGPSQP+PNLNLAAVG TPGS+GGLEGPDRIFVGGLPYYFTE+QIRELLESFG LRGFD
Sbjct: 312 TLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFD 371
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LVKDRETGNSKGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVRRANQG QP PEQESV
Sbjct: 372 LVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESV 431
Query: 457 LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
LLHAQQQIALQR MLQPG++ +KV+CLT+VV+ DEL DD++Y++ILEDMR E KF
Sbjct: 432 LLHAQQQIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFG 488
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/339 (84%), Positives = 305/339 (89%), Gaps = 7/339 (2%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQ--QFGALPVMPVQA 236
SGFDMAPP SA+L A AGQI GA+PAIPGMFPNMFPL T Q F ALPV+PVQA
Sbjct: 224 SGFDMAPPTSAILGA---TGVAGQITGASPAIPGMFPNMFPLPTNQVQPFSALPVLPVQA 280
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
MTQQATRHARRVYVGGL PTANEQSVATFFSQVMA IGGNTAGPGDAVVNVYINH+KKFA
Sbjct: 281 MTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFA 340
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
FVEMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNL VGL+P
Sbjct: 341 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSP 400
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
GSAGGL+GPDRIFVGG+PYYFTE QIRELLE+FGPLRGFDLVKDRETGNSKGYAFCVYQD
Sbjct: 401 GSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQD 460
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESVLLHAQQQIALQRLMLQPG 474
L+VTDIACAALNGIKMGDKTLTVRRANQ N QPKPEQES+L+HAQQQIALQ+LMLQP
Sbjct: 461 LAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQKLMLQPA 520
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
V +KV+CLT VS DELKDDE+YEEIL+DMRQE KF
Sbjct: 521 LVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFG 559
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/343 (84%), Positives = 307/343 (89%), Gaps = 8/343 (2%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQ--QFGALPVMPVQA 236
SGFDMAPP SA+L A AGQI GA+PAIPGMFPNMFPL T Q F ALPV+PVQA
Sbjct: 224 SGFDMAPPTSAILGA---TGVAGQITGASPAIPGMFPNMFPLPTNQVQPFSALPVLPVQA 280
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
MTQQATRHARRVYVGGL PTANEQSVATFFSQVMA IGGNTAGPGDAVVNVYINH+KKFA
Sbjct: 281 MTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFA 340
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
FVEMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNL VGL+P
Sbjct: 341 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSP 400
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
GSAGGL+GPDRIFVGG+PYYFTE QIRELLE+FGPLRGFDLVKDRETGNSKGYAFCVYQD
Sbjct: 401 GSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQD 460
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESVLLHAQQQIALQRLMLQPG 474
L+VTDIACAALNGIKMGDKTLTVRRANQ N QPKPEQES+L+HAQQQIALQ+LMLQP
Sbjct: 461 LAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQKLMLQPA 520
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA-FCS 516
V +KV+CLT VS DELKDDE+YEEIL+DMRQE KF C+
Sbjct: 521 LVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNICN 563
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 289/336 (86%), Positives = 304/336 (90%), Gaps = 5/336 (1%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGA--NPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
GFDMAPP + A AAAGQ+P IPGMFPNMFP+V GQQ GALPV+PVQAM
Sbjct: 190 GFDMAPPD---MLAATAVAAAGQVPSVPTTATIPGMFPNMFPMVPGQQLGALPVLPVQAM 246
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
TQQATRHARRVYVGGLPPTANEQSVATFFSQVM+AIGGNTAGPGDAVVNVYINHEKKFAF
Sbjct: 247 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAF 306
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
VEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAATLGPSQPNPNLNLAAVGL+ G
Sbjct: 307 VEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLAAVGLSSG 366
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
S GGLEGPDRIFVGGLPYYFTE QIRELLESFGPLRGF+LVKDRETGNSKGYAFCVYQD
Sbjct: 367 STGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDP 426
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
SVTDIACAALNGIKMGDKTLTVRRA QG QPKPEQE VLLHAQQQIALQRLMLQPG P
Sbjct: 427 SVTDIACAALNGIKMGDKTLTVRRAIQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGGTP 486
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+K+VCLTQVV+AD+L+DDEEY +I+EDMRQEGGKF
Sbjct: 487 TKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFG 522
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/356 (85%), Positives = 321/356 (90%), Gaps = 5/356 (1%)
Query: 160 RSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGA--NPAIPGMFPNM 217
+SEHRSRSRSRSRSKSKR SGFDMAPP + A AAAGQ+P IPGMF NM
Sbjct: 170 KSEHRSRSRSRSRSKSKRRSGFDMAPPD---MLAATAVAAAGQVPSVPTTATIPGMFSNM 226
Query: 218 FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT 277
FP+V GQQ GALPV+PVQAMTQQATRHARRVYVGGLPPTANEQSV+TFFSQVM+AIGGNT
Sbjct: 227 FPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNT 286
Query: 278 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT 337
AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAAT
Sbjct: 287 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAAT 346
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
LGPSQPNPNLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE QIRELLESFGPLRGF+L
Sbjct: 347 LGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNL 406
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKDRETGNSKGYAFCVYQD SVTDIACAALNGIKMGDKTLTVRRA QGA QPKPEQE VL
Sbjct: 407 VKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVL 466
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L+AQQQIALQRLM QPG P+K+VCLTQVV+AD+L+DDEEY EI+EDMRQEGGKF
Sbjct: 467 LYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFG 522
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/336 (86%), Positives = 306/336 (91%), Gaps = 4/336 (1%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGA--NPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
GFDMAPP MLAA A AAAAGQ+P IPGMF NMFP+V GQQ GALPV+PVQAM
Sbjct: 168 GFDMAPPD--MLAATAVAAAAGQVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAM 225
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
TQQATRHARRVYVGGLPPTANEQSV+TFFSQVM+AIGGNTAGPGDAVVNVYINHEKKFAF
Sbjct: 226 TQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAF 285
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
VEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAATLGPSQPNPNLNL AVGL+ G
Sbjct: 286 VEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSG 345
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
S GGLEGPDRIFVGGLPYYFTE QIRELLESFGPLRGF+LVKDRETGNSKGYAFCVYQD
Sbjct: 346 STGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDP 405
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
SVTDIACAALNGIKMGDKTLTVRRA QGA QPKPEQE VLL+AQQQIALQRLM QPG P
Sbjct: 406 SVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGGTP 465
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+K+VCLTQVV+AD+L+DDEEY EI+EDMRQEGGKF
Sbjct: 466 TKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFG 501
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/356 (85%), Positives = 320/356 (89%), Gaps = 5/356 (1%)
Query: 160 RSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGA--NPAIPGMFPNM 217
+SEHRSRSRSRSRSKSKR SGFDMAPP + A AAAGQ+P IPGMF NM
Sbjct: 170 KSEHRSRSRSRSRSKSKRRSGFDMAPPD---MLAATAVAAAGQVPSVPTTATIPGMFSNM 226
Query: 218 FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT 277
FP+V GQQ GALPV+PVQAMTQQATRHA RVYVGGLPPTANEQSV+TFFSQVM+AIGGNT
Sbjct: 227 FPMVPGQQLGALPVLPVQAMTQQATRHAPRVYVGGLPPTANEQSVSTFFSQVMSAIGGNT 286
Query: 278 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT 337
AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAAT
Sbjct: 287 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAAT 346
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
LGPSQPNPNLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE QIRELLESFGPLRGF+L
Sbjct: 347 LGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNL 406
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKDRETGNSKGYAFCVYQD SVTDIACAALNGIKMGDKTLTVRRA QGA QPKPEQE VL
Sbjct: 407 VKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVL 466
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L+AQQQIALQRLM QPG P+K+VCLTQVV+AD+L+DDEEY EI+EDMRQEGGKF
Sbjct: 467 LYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFG 522
>gi|357156009|ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 576
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/485 (67%), Positives = 370/485 (76%), Gaps = 25/485 (5%)
Query: 44 GSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRD-----MDREKSRDREK 98
G D+ + RS+E + +GR + R+RDR R+KD+DRE+ RD
Sbjct: 35 GFSDHPDDDGRSQEVQPHEGRS-SKSRERDRGRDKDKDRERDRDHGRDRERGRDKDRDRG 93
Query: 99 DREKDRHHRDRHRERS-----RERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRS 153
DRE+DRHHR+ HRERS RERSE+R+ R RS D+DR + DRD E R + R
Sbjct: 94 DRERDRHHRE-HRERSEKREHRERSEKREHRG-----RSDDHDRHQSRDRDVERRDRDRD 147
Query: 154 QSRSRGRSEHRSRSRSRSRSKSKRIS----GFDMAPPASAMLAAGAGAAAAGQIPGANPA 209
R RSRS+S+ S GFD P L A GQ+P P
Sbjct: 148 GHRRHRSRSRSKGRDRRSRSRSRSKSKRVSGFDQGPSQGVPLVTPG--ATPGQLPAVAPL 205
Query: 210 IPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQV 269
IPGM PNMF QF L + P QAMTQQATRHARRVYVGGLPPTANEQ+VA +F+QV
Sbjct: 206 IPGMLPNMFNFTAPTQFNPLAMQP-QAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQV 264
Query: 270 MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD 329
MAAIGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+D
Sbjct: 265 MAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTD 324
Query: 330 YNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESF 389
YNPSLAA LGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESF
Sbjct: 325 YNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESF 384
Query: 390 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQP 449
GPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP
Sbjct: 385 GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQP 444
Query: 450 KPEQESVLLHAQQQIALQRLMLQP-GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
+PEQE++L+ A QQ+ +QRL+LQ G++P+KVVCLTQVVSADEL+DDEEYE+ILEDMR+E
Sbjct: 445 RPEQETILMQAHQQVQMQRLVLQVGGALPTKVVCLTQVVSADELRDDEEYEDILEDMREE 504
Query: 509 GGKFA 513
G K+
Sbjct: 505 GRKYG 509
>gi|357470349|ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 634
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/308 (85%), Positives = 284/308 (92%), Gaps = 2/308 (0%)
Query: 207 NPAIPGMFPNMFPLVTGQ--QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVAT 264
NPAI G+ PNMFP+ Q QF ALP+MP+QAMTQQATRHARRVYVGGLPPTANEQSVA
Sbjct: 259 NPAISGVLPNMFPMGANQMPQFSALPMMPIQAMTQQATRHARRVYVGGLPPTANEQSVAI 318
Query: 265 FFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 324
FFSQVMA IGGNTAGPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGIIFEGAPVKV
Sbjct: 319 FFSQVMANIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 378
Query: 325 RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRE 384
RRP+DYNPSLAATLGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE QIRE
Sbjct: 379 RRPTDYNPSLAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTETQIRE 438
Query: 385 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ 444
LLE+FGPLRGFDLVKDRETGNSKGYAFCVY DL+VTDIACAALNGIKMGDKTLTVRRANQ
Sbjct: 439 LLETFGPLRGFDLVKDRETGNSKGYAFCVYADLAVTDIACAALNGIKMGDKTLTVRRANQ 498
Query: 445 GANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILED 504
G QPKPEQES+L+HAQQQIALQ+L+ QP V +KVVCLT V+ +ELK+DE++EEI++D
Sbjct: 499 GTTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPEELKEDEDFEEIIDD 558
Query: 505 MRQEGGKF 512
MRQE KF
Sbjct: 559 MRQECSKF 566
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 13/50 (26%)
Query: 26 SSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRT 75
SSPQP D SK +H SRDY+RESSRSREKE R+RDR
Sbjct: 37 SSPQPL---DQPVSKSRHESRDYDRESSRSREKE----------RERDRK 73
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/339 (80%), Positives = 290/339 (85%), Gaps = 22/339 (6%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQ--QFGALPVMPVQA 236
SGFDMAPP SA+L A AGQI GA+PAIPGMFPNMFPL T Q F ALPV+PVQA
Sbjct: 224 SGFDMAPPTSAILGA---TGVAGQITGASPAIPGMFPNMFPLPTNQVQPFSALPVLPVQA 280
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
MTQQATRHARRVYVGGL PTANEQSVATFFSQVMA IGGNTAGPGDAV
Sbjct: 281 MTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAV------------ 328
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
MRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNL VGL+P
Sbjct: 329 ---MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSP 385
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
GSAGGL+GPDRIFVGG+PYYFTE QIRELLE+FGPLRGFDLVKDRETGNSKGYAFCVYQD
Sbjct: 386 GSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQD 445
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESVLLHAQQQIALQRLMLQPG 474
L+VTDIACAALNGIKMGDKTLTVRRANQ N QPKPEQES+L+HAQQQIALQ+LMLQP
Sbjct: 446 LAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQKLMLQPA 505
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
V +KV+CLT VS DELKDDE+YEEIL+DMRQE KF
Sbjct: 506 LVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFG 544
>gi|122245120|sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum aestivum]
Length = 543
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 331/468 (70%), Positives = 384/468 (82%), Gaps = 23/468 (4%)
Query: 53 SRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREK-------DRH 105
+ +RE+ K RDRDR++D+D+ R +DRDR++ RD DR + RD +KDR++ RH
Sbjct: 23 THTREEGLSKSRDRDREKDKDKERHRDRDRDRGRDRDRGRDRDLDKDRDRDKDRDRHQRH 82
Query: 106 HRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRS 165
HRD+ R R DD D +RSRD +RR+D +RD RH+ RS+SRSRGR +HRS
Sbjct: 83 HRDKREHRDRP--------DDHDRHRSRDSERRRDRERDGHRRHRSRSRSRSRGRDDHRS 134
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQ 225
RS S KSKR+SGFD+ P A ++L Q+PG+ +IPGMFPNM P GQ
Sbjct: 135 RSHS----KSKRVSGFDLGPTAQSVLPQFPTIPTPSQLPGS--SIPGMFPNMLPFADGQ- 187
Query: 226 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
L VM QAMTQQATRHARRVYVGGLPP+ANEQSVA +F+QVMAAIGGNTAGPGDAV+
Sbjct: 188 INPL-VMQPQAMTQQATRHARRVYVGGLPPSANEQSVAIYFNQVMAAIGGNTAGPGDAVL 246
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQP+
Sbjct: 247 NVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSS 306
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGN
Sbjct: 307 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 366
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
SKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQG+ QP+PEQE++LL AQQQ+
Sbjct: 367 SKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQENILLQAQQQVQ 426
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
LQ+L+ Q G++P+KVVCLTQVV+ADELKDDEEYE+I+EDMR E GK+
Sbjct: 427 LQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYG 474
>gi|156070782|gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
Length = 506
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/413 (68%), Positives = 319/413 (77%), Gaps = 42/413 (10%)
Query: 130 YRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASA 189
Y S + RR++ D+D ED H+ R SR + RS+S SKS+RISGFDMAPP SA
Sbjct: 39 YASLFFKRRRENDKDIEDPHRHRPGSRGK-------TDRSQSPSKSRRISGFDMAPPTSA 91
Query: 190 MLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQ------------------------- 224
+L AA GQ+PG NP+IPGMF NMFPL + Q
Sbjct: 92 LLPGATDAA--GQVPGTNPSIPGMFSNMFPLASDQVLPQIPSYYTSNGLLIFSFLIHLVC 149
Query: 225 ---QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 281
Q G PVMP+Q MTQQATRHARRVYVGGLP +ANEQSVATFFS VM AIGGNTAGPG
Sbjct: 150 GFFQCGPFPVMPIQEMTQQATRHARRVYVGGLPSSANEQSVATFFSHVMYAIGGNTAGPG 209
Query: 282 DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 341
DAV++VYINHEKKFAFVEMRSVEEASNAMALDG+IFEG PV+VRRPSDYN SLAATLGPS
Sbjct: 210 DAVIDVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGEPVRVRRPSDYNASLAATLGPS 269
Query: 342 QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDR 401
QP+PNLNLAAVGLTPGS+GGLEGPD IF+GGLP YFTEAQIRELLESFGPLRGF+LVKDR
Sbjct: 270 QPSPNLNLAAVGLTPGSSGGLEGPDCIFIGGLPDYFTEAQIRELLESFGPLRGFNLVKDR 329
Query: 402 ETGNSKGYAFCVYQDLSVTDIACAALNGIK-MGDKTLTVRRANQGANQPKPEQESVLLHA 460
E+GNSKG+AF VYQD+SVT+IAC ALNGIK M DKTL VRRANQG Q PEQESVL
Sbjct: 330 ESGNSKGHAFFVYQDVSVTEIACGALNGIKIMHDKTLIVRRANQGTQQLNPEQESVL--- 386
Query: 461 QQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
QQI+LQRLML PG++ +KV+CLT+ V DEL DD++Y++ILEDMR E GKF
Sbjct: 387 -QQISLQRLMLLPGALATKVLCLTEAVRLDELNDDDDYQDILEDMRTECGKFG 438
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 277/335 (82%), Positives = 302/335 (90%), Gaps = 4/335 (1%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
+SGFDMAPPA A++ Q PG AIPGMFPNM P+ GQ F L + P QAM
Sbjct: 150 VSGFDMAPPAQAVVPQFPAIPTPSQFPGT--AIPGMFPNMLPMGVGQ-FNPLVIQP-QAM 205
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
TQQATRHARRVYVGGLPPTANEQSVA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAF
Sbjct: 206 TQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAF 265
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
VEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLTPG
Sbjct: 266 VEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPG 325
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
SAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL
Sbjct: 326 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 385
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+VTDIACAALNGIKMGDKTLTVRRANQGA QP+PEQES+LL AQQQ+ LQ+L+ Q G++P
Sbjct: 386 NVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGALP 445
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+KVVCLTQVVSADELKDDEEYE+I+EDMR E GK+
Sbjct: 446 TKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKY 480
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 277/335 (82%), Positives = 302/335 (90%), Gaps = 4/335 (1%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
+SGFDMAPPA A++ Q PG AIPGMFPNM P+ GQ F L + P QAM
Sbjct: 150 VSGFDMAPPAQAVVPQFPAIPTPSQFPGT--AIPGMFPNMLPMGVGQ-FNPLVIQP-QAM 205
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
TQQATRHARRVYVGGLPPTANEQSVA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAF
Sbjct: 206 TQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAF 265
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
VEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLTPG
Sbjct: 266 VEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPG 325
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
SAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL
Sbjct: 326 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 385
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+VTDIACAALNGIKMGDKTLTVRRANQGA QP+PEQES+LL AQQQ+ LQ+L+ Q G++P
Sbjct: 386 NVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGALP 445
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+KVVCLTQVVSADELKDDEEYE+I+EDMR E GK+
Sbjct: 446 TKVVCLTQVVSADELKDDEEYEDIMEDMRLESGKY 480
>gi|414591747|tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 590
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 338/521 (64%), Positives = 399/521 (76%), Gaps = 15/521 (2%)
Query: 4 YEVNGEDVDNNNNNNNNNYEY-GSSP----QPRSADDHSD---SKPQHGSRDYERESSRS 55
Y+ NG+ Y G SP +P DH+D S+PQH ++ + SS+S
Sbjct: 8 YQGNGDPATPEGGYAQTEYAAAGGSPPADRKPSVFSDHADGRSSQPQHETQSHGSGSSKS 67
Query: 56 REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSR 115
RE+++E+ + +DR+R RDR REK+RDR++ +D +R DR R RE
Sbjct: 68 RERDRERDKGKDRERGRDRVREKERDRDRDKDRERGDRDRDRDRHHMDRRERSEIREHRD 127
Query: 116 ERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKS 175
+R + RDD D RS D +RR+D DRD RH+ RS S SR + RSRSRSRSRSKS
Sbjct: 128 RSDDRDRHRDDRDRRRSHDSERRRDRDRDGHRRHRSRSPSMSR-DRDRRSRSRSRSRSKS 186
Query: 176 KRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMP 233
KR+SGFD AP A+ AG GQ+PG IPG+ PN++ L GQ F L + P
Sbjct: 187 KRVSGFDQAPTQQALPIVAAGVIP-GQLPGVTAPIPGVGVLPNLYNLAAGQ-FNPLAIQP 244
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
QAMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+K
Sbjct: 245 -QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDK 303
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
KFAFVEMRSVEEASNAM LDGI+FEGAPVK+RRP+DYNPSLAA LGPSQPNPNLNL+AVG
Sbjct: 304 KFAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVG 363
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
LTPGSAGGLEGPDRIFVGGL YYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCV
Sbjct: 364 LTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCV 423
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP 473
YQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ +Q+ + Q
Sbjct: 424 YQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQV 483
Query: 474 -GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
G++P+KVVCLTQVV+ DEL+DDEEY++I+EDMR+EG K+
Sbjct: 484 GGALPTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYG 524
>gi|414591746|tpg|DAA42317.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 338/521 (64%), Positives = 399/521 (76%), Gaps = 15/521 (2%)
Query: 4 YEVNGEDVDNNNNNNNNNYEY-GSSP----QPRSADDHSD---SKPQHGSRDYERESSRS 55
Y+ NG+ Y G SP +P DH+D S+PQH ++ + SS+S
Sbjct: 8 YQGNGDPATPEGGYAQTEYAAAGGSPPADRKPSVFSDHADGRSSQPQHETQSHGSGSSKS 67
Query: 56 REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSR 115
RE+++E+ + +DR+R RDR REK+RDR++ +D +R DR R RE
Sbjct: 68 RERDRERDKGKDRERGRDRVREKERDRDRDKDRERGDRDRDRDRHHMDRRERSEIREHRD 127
Query: 116 ERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKS 175
+R + RDD D RS D +RR+D DRD RH+ RS S SR + RSRSRSRSRSKS
Sbjct: 128 RSDDRDRHRDDRDRRRSHDSERRRDRDRDGHRRHRSRSPSMSR-DRDRRSRSRSRSRSKS 186
Query: 176 KRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMP 233
KR+SGFD AP A+ AG GQ+PG IPG+ PN++ L GQ F L + P
Sbjct: 187 KRVSGFDQAPTQQALPIVAAGVIP-GQLPGVTAPIPGVGVLPNLYNLAAGQ-FNPLAIQP 244
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
QAMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+K
Sbjct: 245 -QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDK 303
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
KFAFVEMRSVEEASNAM LDGI+FEGAPVK+RRP+DYNPSLAA LGPSQPNPNLNL+AVG
Sbjct: 304 KFAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVG 363
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
LTPGSAGGLEGPDRIFVGGL YYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCV
Sbjct: 364 LTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCV 423
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP 473
YQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ +Q+ + Q
Sbjct: 424 YQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQV 483
Query: 474 -GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
G++P+KVVCLTQVV+ DEL+DDEEY++I+EDMR+EG K+
Sbjct: 484 GGALPTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYG 524
>gi|108864608|gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
Length = 550
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/349 (75%), Positives = 301/349 (86%), Gaps = 10/349 (2%)
Query: 202 QIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 261
Q+P PAI GM PNMF L T F L + P QAMTQQATRHARRVYVGGLPPTANE +
Sbjct: 196 QVPVVAPAISGMLPNMFNL-TQTPFTPLVIQP-QAMTQQATRHARRVYVGGLPPTANEHT 253
Query: 262 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 321
VA +F+QVMAA+GGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAP
Sbjct: 254 VAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAP 313
Query: 322 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
VKVRRP+DYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ
Sbjct: 314 VKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 373
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRR
Sbjct: 374 VRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRR 433
Query: 442 ANQGANQPKPEQESVLLHAQQQIALQRLMLQP--GSVPSKVVCLTQVVSADELKDDEEYE 499
ANQGA+QP+PEQES+LLH QQQ +Q+LM Q G++P+KVVCLTQVVS DEL+DDEEYE
Sbjct: 434 ANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTKVVCLTQVVSPDELRDDEEYE 493
Query: 500 EILEDMRQEGGKF---AFCSPTFCYKESGLI---YTDRRLHNPQFVYFY 542
+I++DMR+EG ++ + + +F + ++ ++ ++ HN F Y
Sbjct: 494 DIVQDMREEGCRYVPHSAIAESFIVRPYAILAVGHSLQKTHNSNFTLLY 542
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 271/339 (79%), Positives = 302/339 (89%), Gaps = 6/339 (1%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMPVQ 235
+SGFD APP A+ AGA GQ+PG IPG+ PN++ L GQ F L + P Q
Sbjct: 193 VSGFDQAPPQHALPIVAAGAIP-GQLPGITAPIPGVGVLPNLYNLAAGQ-FNPLVIQP-Q 249
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
AMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+KKF
Sbjct: 250 AMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKF 309
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNLAAVGLT
Sbjct: 310 AFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLT 369
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
PGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 370 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 429
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP-G 474
DL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ +Q+L+ Q G
Sbjct: 430 DLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKLVYQVGG 489
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++P+KVVCLTQVV+ADEL+DDEEY +I+EDMR+EG K+
Sbjct: 490 ALPTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYG 528
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 271/339 (79%), Positives = 302/339 (89%), Gaps = 6/339 (1%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMPVQ 235
+SGFD APP A+ AGA GQ+PG IPG+ PN++ L GQ F L + P Q
Sbjct: 193 VSGFDQAPPQHALPIVAAGAIP-GQLPGITAPIPGVGVLPNLYNLAAGQ-FNPLVIQP-Q 249
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
AMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+KKF
Sbjct: 250 AMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKF 309
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNLAAVGLT
Sbjct: 310 AFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLT 369
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
PGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 370 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 429
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP-G 474
DL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ +Q+L+ Q G
Sbjct: 430 DLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKLVYQVGG 489
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++P+KVVCLTQVV+ADEL+DDEEY +I+EDMR+EG K+
Sbjct: 490 ALPTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYV 528
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/339 (79%), Positives = 301/339 (88%), Gaps = 6/339 (1%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMPVQ 235
+SGFD APP A+ AGA GQ+PG IPG+ PN++ L GQ F L + P Q
Sbjct: 195 VSGFDQAPPQHALPIVAAGAIP-GQLPGITAPIPGVGVLPNLYNLAAGQ-FNPLVIQP-Q 251
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
AMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+KKF
Sbjct: 252 AMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKF 311
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNLAAVGLT
Sbjct: 312 AFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLT 371
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
PGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 372 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 431
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP-G 474
DL+VTDIACAALNGIKMGDKTLTV RANQGA+QP+PEQES+LL AQQQ+ +Q+L+ Q G
Sbjct: 432 DLNVTDIACAALNGIKMGDKTLTVSRANQGASQPRPEQESILLQAQQQVQMQKLVYQVGG 491
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++P+KVVCLTQVV+ADEL+DDEEY +I+EDMR+EG K+
Sbjct: 492 ALPTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYG 530
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|108864607|gb|ABA94914.2| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|222616290|gb|EEE52422.1| hypothetical protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/314 (82%), Positives = 286/314 (91%), Gaps = 4/314 (1%)
Query: 202 QIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 261
Q+P PAI GM PNMF L T F L + P QAMTQQATRHARRVYVGGLPPTANE +
Sbjct: 196 QVPVVAPAISGMLPNMFNL-TQTPFTPLVIQP-QAMTQQATRHARRVYVGGLPPTANEHT 253
Query: 262 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 321
VA +F+QVMAA+GGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAP
Sbjct: 254 VAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAP 313
Query: 322 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
VKVRRP+DYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ
Sbjct: 314 VKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 373
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRR
Sbjct: 374 VRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRR 433
Query: 442 ANQGANQPKPEQESVLLHAQQQIALQRLMLQP--GSVPSKVVCLTQVVSADELKDDEEYE 499
ANQGA+QP+PEQES+LLH QQQ +Q+LM Q G++P+KVVCLTQVVS DEL+DDEEYE
Sbjct: 434 ANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTKVVCLTQVVSPDELRDDEEYE 493
Query: 500 EILEDMRQEGGKFA 513
+I++DMR+EG ++
Sbjct: 494 DIVQDMREEGCRYG 507
>gi|226532558|ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
gi|194701008|gb|ACF84588.1| unknown [Zea mays]
gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 583
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 335/521 (64%), Positives = 395/521 (75%), Gaps = 22/521 (4%)
Query: 4 YEVNGEDVDNNNNNNNNNYEY-GSSP----QPRSADDHSD---SKPQHGSRDYERESSRS 55
Y+ NG+ Y G SP +P DH+D S+PQH ++ + SS+S
Sbjct: 8 YQGNGDPATPEGGYAQTEYAAAGGSPPADRKPSVFSDHADGRSSQPQHETQSHGSGSSKS 67
Query: 56 REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSR 115
RE+++E+ + +DR+R RDR REK+RDR++ +D +R DR R RE
Sbjct: 68 RERDRERDKGKDRERGRDRVREKERDRDRDKDRERGDRDRDRDRHHMDRRERSEIREHRD 127
Query: 116 ERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKS 175
+R + RDD D RS D +RR+D DRD RH+ RS S SR + RSRSRSRSRSKS
Sbjct: 128 RSDDRDRHRDDRDRRRSHDSERRRDRDRDGHRRHRSRSPSMSR-DRDRRSRSRSRSRSKS 186
Query: 176 KRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMP 233
KR+SGFD AP A+ AG GQ+PG IPG+ PN++ L GQ
Sbjct: 187 KRVSGFDQAPTQQALPIVAAGVIP-GQLPGVTAPIPGVGVLPNLYNLAAGQP-------- 237
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
QAMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+K
Sbjct: 238 -QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDK 296
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
KFAFVEMRSVEEASNAM LDGI+FEGAPVK+RRP+DYNPSLAA LGPSQPNPNLNL+AVG
Sbjct: 297 KFAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVG 356
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
LTPGSAGGLEGPDRIFVGGL YYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCV
Sbjct: 357 LTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCV 416
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP 473
YQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ +Q+ + Q
Sbjct: 417 YQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQV 476
Query: 474 -GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
G++P+KVVCLTQVV+ DEL+DDEEY++I+EDMR+EG K+
Sbjct: 477 GGALPTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYG 517
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/314 (82%), Positives = 286/314 (91%), Gaps = 4/314 (1%)
Query: 202 QIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 261
Q+P PAI GM PNMF L T F L + P QAMTQQATRHARRVYVGGLPPTANE +
Sbjct: 196 QVPVVAPAISGMLPNMFNL-TQTPFTPLVIQP-QAMTQQATRHARRVYVGGLPPTANEHT 253
Query: 262 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 321
VA +F+QVMAA+GGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAP
Sbjct: 254 VAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAP 313
Query: 322 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
VKVRRP+DYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ
Sbjct: 314 VKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 373
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRR
Sbjct: 374 VRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRR 433
Query: 442 ANQGANQPKPEQESVLLHAQQQIALQRLMLQP--GSVPSKVVCLTQVVSADELKDDEEYE 499
ANQGA+QP+PEQES+LLH QQQ +Q+LM Q G++P+KVVCLTQV+S DEL+DDEEYE
Sbjct: 434 ANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTKVVCLTQVISPDELRDDEEYE 493
Query: 500 EILEDMRQEGGKFA 513
+I++DMR+EG ++
Sbjct: 494 DIVQDMREEGCRYG 507
>gi|414591745|tpg|DAA42316.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 335/521 (64%), Positives = 395/521 (75%), Gaps = 22/521 (4%)
Query: 4 YEVNGEDVDNNNNNNNNNYEY-GSSP----QPRSADDHSD---SKPQHGSRDYERESSRS 55
Y+ NG+ Y G SP +P DH+D S+PQH ++ + SS+S
Sbjct: 8 YQGNGDPATPEGGYAQTEYAAAGGSPPADRKPSVFSDHADGRSSQPQHETQSHGSGSSKS 67
Query: 56 REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSR 115
RE+++E+ + +DR+R RDR REK+RDR++ +D +R DR R RE
Sbjct: 68 RERDRERDKGKDRERGRDRVREKERDRDRDKDRERGDRDRDRDRHHMDRRERSEIREHRD 127
Query: 116 ERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKS 175
+R + RDD D RS D +RR+D DRD RH+ RS S SR + RSRSRSRSRSKS
Sbjct: 128 RSDDRDRHRDDRDRRRSHDSERRRDRDRDGHRRHRSRSPSMSR-DRDRRSRSRSRSRSKS 186
Query: 176 KRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMP 233
KR+SGFD AP A+ AG GQ+PG IPG+ PN++ L GQ
Sbjct: 187 KRVSGFDQAPTQQALPIVAAGVIP-GQLPGVTAPIPGVGVLPNLYNLAAGQP-------- 237
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
QAMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+K
Sbjct: 238 -QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDK 296
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
KFAFVEMRSVEEASNAM LDGI+FEGAPVK+RRP+DYNPSLAA LGPSQPNPNLNL+AVG
Sbjct: 297 KFAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVG 356
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
LTPGSAGGLEGPDRIFVGGL YYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCV
Sbjct: 357 LTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCV 416
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP 473
YQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ +Q+ + Q
Sbjct: 417 YQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQV 476
Query: 474 -GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
G++P+KVVCLTQVV+ DEL+DDEEY++I+EDMR+EG K+
Sbjct: 477 GGALPTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYV 517
>gi|115486631|ref|NP_001068459.1| Os11g0682300 [Oryza sativa Japonica Group]
gi|113645681|dbj|BAF28822.1| Os11g0682300, partial [Oryza sativa Japonica Group]
Length = 378
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/313 (85%), Positives = 291/313 (92%), Gaps = 4/313 (1%)
Query: 200 AGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 259
AGQ PG AIPGMFPNM P+ GQ F L + P QAMTQQATRHARRVYVGGLPPTANE
Sbjct: 2 AGQFPGT--AIPGMFPNMLPMGVGQ-FNPLVIQP-QAMTQQATRHARRVYVGGLPPTANE 57
Query: 260 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 319
QSVA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEG
Sbjct: 58 QSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEG 117
Query: 320 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 379
APVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE
Sbjct: 118 APVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 177
Query: 380 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
AQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTV
Sbjct: 178 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 237
Query: 440 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE 499
RRANQGA QP+PEQES+LL AQQQ+ LQ+L+ Q G++P+KVVCLTQVVSADELKDDEEYE
Sbjct: 238 RRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYE 297
Query: 500 EILEDMRQEGGKF 512
+I+EDMR E GK+
Sbjct: 298 DIMEDMRLEAGKY 310
>gi|168028774|ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681881|gb|EDQ68304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 486
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 280/439 (63%), Positives = 317/439 (72%), Gaps = 32/439 (7%)
Query: 90 REKSRDREKDREKDRHHRDRHRERSRER---------------SERRKDRDDDDHYRSRD 134
RE RDREK REK+R R R SER + D D SRD
Sbjct: 1 RESGRDREKSREKERDRRHRDDRDRDRDRGDRVDRGDRGDRDRSERHRSHDRD----SRD 56
Query: 135 YDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAG 194
Y R R R + R R K+ SGFDMAPP + ++A
Sbjct: 57 YGDRDRRHRHRSRSNTLSRSPSRDRRRSRSRSPSRDRRRKT---SGFDMAPPGATVVA-- 111
Query: 195 AGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLP 254
GQIPG PA+PG+FP MFP QQFG LP MP QAMTQQATRHARRVYVGGLP
Sbjct: 112 ------GQIPGMPPAMPGVFPAMFPFGGTQQFGGLPGMPAQAMTQQATRHARRVYVGGLP 165
Query: 255 PTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG 314
P ANEQ++AT+FSQVMAA+GGNTAGPGDAVVNVYIN EKKFAFVEMR+VEEASNAMALDG
Sbjct: 166 PMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDG 225
Query: 315 IIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLP 374
IIFEG V+VRRPSDYNPS+AATLGPSQP+P+LNLAAVGLTPG+AGG +GPDRIFVGGLP
Sbjct: 226 IIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLP 285
Query: 375 YYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGD 434
YY TE QI+ELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD SV DIACA LNG+KM D
Sbjct: 286 YYLTEVQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPSVVDIACATLNGMKMDD 345
Query: 435 KTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKD 494
KTL VRRA + QPKP+Q +VL HAQQQIA+Q+L LQ P+KVV LT+VV+ ++L+D
Sbjct: 346 KTLNVRRAT-ASGQPKPDQANVLAHAQQQIAIQKLALQ-AKTPTKVVALTEVVTPNQLED 403
Query: 495 DEEYEEILEDMRQEGGKFA 513
DEEY+EI+EDM E GK+
Sbjct: 404 DEEYQEIMEDMGTECGKYG 422
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/335 (80%), Positives = 297/335 (88%), Gaps = 3/335 (0%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGAN-PAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
GFD APP AM + Q+PG++ P I GMFPNM P QF L + P QAMT
Sbjct: 140 GFD-APPPQAMGSTFPVIPTPSQLPGSSLPNIGGMFPNMLPFGVAGQFNPLVIQP-QAMT 197
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPP+ANEQ+VA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFV
Sbjct: 198 QQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 257
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLT GS
Sbjct: 258 EMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGS 317
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+
Sbjct: 318 NGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLT 377
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ LQ+L+ Q G++P+
Sbjct: 378 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGALPT 437
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
KVVCLTQVV+ADELKDDEEYE+I+EDMR E GK+
Sbjct: 438 KVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYG 472
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/334 (80%), Positives = 296/334 (88%), Gaps = 3/334 (0%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGAN-PAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
GFD APP AM + Q+PG + P I GMFPNM P QF L + P QAMT
Sbjct: 146 GFD-APPPQAMGSPFPVIPTPSQLPGTSLPNIGGMFPNMLPFGVAGQFNPLVIQP-QAMT 203
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPP+ANEQ+VA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFV
Sbjct: 204 QQATRHARRVYVGGLPPSANEQTVAVYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 263
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLT GS
Sbjct: 264 EMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGS 323
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+
Sbjct: 324 TGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLT 383
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ LQ+L+ Q G++P+
Sbjct: 384 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGALPT 443
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
KVVCLTQVV+ADELKDDEEYE+I+EDMR E GK+
Sbjct: 444 KVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKY 477
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/335 (80%), Positives = 297/335 (88%), Gaps = 3/335 (0%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGAN-PAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
GFD APP AM + Q+PG++ P I GMFPNM P QF L + P QAMT
Sbjct: 140 GFD-APPPQAMGSTFPVIPTPSQLPGSSLPNIGGMFPNMLPFGVAGQFNPLVIQP-QAMT 197
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPP+ANEQ+VA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFV
Sbjct: 198 QQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 257
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLT GS
Sbjct: 258 EMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGS 317
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+
Sbjct: 318 NGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLT 377
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ LQ+L+ Q G++P+
Sbjct: 378 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGALPT 437
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
KVVCLTQVV+ADELKDDEEYE+I+EDMR E GK+
Sbjct: 438 KVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYG 472
>gi|9858779|gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
Length = 532
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/339 (76%), Positives = 280/339 (82%), Gaps = 34/339 (10%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGA-NPAIPGMFPNMFPLVTGQQFGALPVMPVQA 236
ISGFDMAPP SA+L+ A GQ+PG NP+IPGMF NMFPL GQ
Sbjct: 158 ISGFDMAPPTSALLSGATDVA--GQVPGTTNPSIPGMFSNMFPLAAGQ------------ 203
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATF--FSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
ATRHARRVYVGGLPPTANEQ + FS GDAVVNVYINHEKK
Sbjct: 204 ----ATRHARRVYVGGLPPTANEQVLKILLKFS-------------GDAVVNVYINHEKK 246
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
FAFVEMRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAATLGPSQP+PNLNLAAVGL
Sbjct: 247 FAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGL 306
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
TPGS+GGLEGPDRIFVGGLPYYFTE+QIRELLESFG LRGFDLVKDRETGNSKGYAFCVY
Sbjct: 307 TPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVY 366
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPG 474
QD+SVTDIACAALNGIKMGDKTLTVRRANQG QP PEQESVLLHAQQQIALQR MLQPG
Sbjct: 367 QDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPG 426
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++ +KV+CLT+VVS DELKDD++Y++ILEDMR E GKF
Sbjct: 427 ALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFG 465
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/335 (79%), Positives = 295/335 (88%), Gaps = 3/335 (0%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGAN-PAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
GFD APP AM + Q+PG++ P I GMFPNM P QF L + P QAMT
Sbjct: 140 GFD-APPPQAMGSTFPVIPTPSQLPGSSLPNIGGMFPNMLPFGVAGQFNPLVIQP-QAMT 197
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPP+ANEQ+VA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFV
Sbjct: 198 QQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 257
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQP+PNLNLAAVGLT GS
Sbjct: 258 EMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGS 317
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+
Sbjct: 318 NGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLT 377
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ LQ+L+ Q G++P+
Sbjct: 378 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGALPT 437
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
KVVCLTQVV+ADELKDDEEYE+I+EDMR E G
Sbjct: 438 KVVCLTQVVTADELKDDEEYEDIMEDMRLEAGNLV 472
>gi|168021052|ref|XP_001763056.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685868|gb|EDQ72261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/342 (73%), Positives = 290/342 (84%), Gaps = 7/342 (2%)
Query: 175 SKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPV 234
++ SGFDMAPP +A+++ GAA AGQIPG +PG++P MFP QQFG +P MP
Sbjct: 98 CRKQSGFDMAPPGAAVVS---GAALAGQIPGIAQPMPGVYPGMFPFGGTQQFGGIPGMPA 154
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
QAMTQQATRHARRVYVGGLPP ANEQ++AT+FSQVMAA+GGNTAGPGDAVVNVYIN EKK
Sbjct: 155 QAMTQQATRHARRVYVGGLPPLANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKK 214
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
FAFVEMR+VEEASNAMALDGI+FEG V+VRRPSDYNPS+AATLGPSQP+P+LNLAAVGL
Sbjct: 215 FAFVEMRTVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGL 274
Query: 355 TPG-SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
TPG +AGG +GPDRIFVGGLPYY TE QI+ELLESFGPLRGFDLVKDR+TGNSKGY FCV
Sbjct: 275 TPGNAAGGADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCV 334
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM--- 470
YQD SV DIACA LNG+KM DKTL VRRA +PKP+Q +VL HAQQQIA+Q L+
Sbjct: 335 YQDPSVVDIACATLNGMKMDDKTLNVRRATARLARPKPDQANVLAHAQQQIAIQVLVYSW 394
Query: 471 LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ P P+ VV LTQVVS DELKDDEEY++ILEDM++E GK+
Sbjct: 395 MSPVETPTNVVALTQVVSPDELKDDEEYQDILEDMKEECGKY 436
>gi|108864648|gb|ABG22574.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 366
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/300 (86%), Positives = 282/300 (94%), Gaps = 2/300 (0%)
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
MFPNM P+ GQ F L + P QAMTQQATRHARRVYVGGLPPTANEQSVA +F+QVMAA
Sbjct: 1 MFPNMLPMGVGQ-FNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAA 58
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
IGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNP
Sbjct: 59 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNP 118
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
SLAA LGPSQP+PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPL
Sbjct: 119 SLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 178
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
RGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQGA QP+PE
Sbjct: 179 RGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPE 238
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
QES+LL AQQQ+ LQ+L+ Q G++P+KVVCLTQVVSADELKDDEEYE+I+EDMR E GK+
Sbjct: 239 QESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKY 298
>gi|357160098|ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 534
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/417 (66%), Positives = 328/417 (78%), Gaps = 17/417 (4%)
Query: 99 DREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSR 158
DRE H DR+R+R R E R+ + +H D DY R R +RR + R
Sbjct: 66 DREMGYEHGDRNRDRDRHHQEHRERSERREHRGRSD---DHDYRRSRNHESERRERDRD- 121
Query: 159 GRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMF 218
G RSRSRSRSR++SKR+SGFD P S ++ A + G +P AIP M PNMF
Sbjct: 122 GHRRQRSRSRSRSRAQSKRVSGFDQGP--SQTISIAAPSVTPGLLPAVPAAIPAMLPNMF 179
Query: 219 PL-VTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT 277
+ + GQ QAMTQQATRHARRVYVGGLPP+ANEQ+VA +F+ VMAAIGGN
Sbjct: 180 NIPIAGQP---------QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNHVMAAIGGNA 230
Query: 278 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT 337
AG GDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPS AA
Sbjct: 231 AGLGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSQAAV 290
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ++ELLE+FGPLRGFD+
Sbjct: 291 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVQELLETFGPLRGFDI 350
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKDRETGNSKGYAFCVYQDL+VTDIACAALNGI++GD+TLTVRRANQGA +P+PE E++L
Sbjct: 351 VKDRETGNSKGYAFCVYQDLAVTDIACAALNGIQLGDRTLTVRRANQGAAEPRPEHENIL 410
Query: 458 LHAQQQIALQRLMLQP-GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L AQ Q +++L+ + G++P+KVVCLTQVVS D+L++DEEY++ILEDM EG K+
Sbjct: 411 LQAQHQAQMKKLVYEVGGAIPTKVVCLTQVVSEDDLRNDEEYKDILEDMTFEGRKYG 467
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 303/520 (58%), Positives = 359/520 (69%), Gaps = 53/520 (10%)
Query: 49 ERESSRSREKEKEKGRDRDRDRDRDRTREK------------------------------ 78
ER+ + RE+ + G DR+R RDR+ RE+
Sbjct: 43 ERDEDKDRERHRRHGEDRERYRDRESVRERGEGSRDRERHRREHREESRDRERHHREHRE 102
Query: 79 -DRDREKSRDMDREKSRDREK--------DREKDRHHRDRHRERSRERSERRKDRDDDDH 129
RDRE+ RE SRDRE+ R+++RHHRD HRE SR+R +D +
Sbjct: 103 GSRDRERHHREHREGSRDRERHHREHREGSRDRERHHRD-HREGSRDRERHHRDHRERSE 161
Query: 130 YRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPP-AS 188
R R DR R G HRSRS RS S+SKR+SGFD P A
Sbjct: 162 RREHRDRSDDRDYRRSCDRDAERRDRDRDGHRRHRSRSPLRSESQSKRMSGFDQRPSEAI 221
Query: 189 AMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRV 248
+LA A + ++P ANP GMFPNM P + P+ AMTQQATRHARRV
Sbjct: 222 PILAPDATPSQLPELPAANP---GMFPNMLPNLVNVPALGQPL----AMTQQATRHARRV 274
Query: 249 YVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASN 308
YVGGLPP ANEQ+VA FF+QVMAAIGGNT G AVVNVYINH+KKFAFVEMRSVEEASN
Sbjct: 275 YVGGLPPIANEQTVAVFFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVEMRSVEEASN 334
Query: 309 AMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRI 368
AMALDGI+FEGAPVKVRRP+DYNPS AA LGPSQPNPNLNLAAVGLTPG+ GGLEGPDRI
Sbjct: 335 AMALDGIMFEGAPVKVRRPTDYNPSQAAALGPSQPNPNLNLAAVGLTPGAGGGLEGPDRI 394
Query: 369 FVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALN 428
FVGGLPYYFTEAQ+RELLE+FGPLRGFD+VKD+ETGNSKGYAFC+Y+D +VTDIACAALN
Sbjct: 395 FVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTVTDIACAALN 454
Query: 429 GIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPG-SVPSKVVCLTQVV 487
GI++GD+TLTVRRANQGA +P+PEQE++LL AQQ+ ++RL+ + G ++ +KVVCLTQVV
Sbjct: 455 GIQLGDRTLTVRRANQGA-EPRPEQENILLQAQQEAQMKRLVYEVGRTLTTKVVCLTQVV 513
Query: 488 SADELKDDEEYEEILEDMRQEGGKFAFCSPTFCYKESGLI 527
SAD+L+DDEEY +ILEDM EG K+ P ES +I
Sbjct: 514 SADDLRDDEEYNDILEDMTLEGHKYV---PHSTIAESFII 550
>gi|224030681|gb|ACN34416.1| unknown [Zea mays]
Length = 425
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/339 (76%), Positives = 293/339 (86%), Gaps = 13/339 (3%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALPVMPVQ 235
+SGFD AP A+ AG GQ+PG IPG+ PN++ L GQ Q
Sbjct: 76 VSGFDQAPTQQALPIVAAGVIP-GQLPGVTAPIPGVGVLPNLYNLAAGQP---------Q 125
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
AMTQQATRHARRVYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV+NVYINH+KKF
Sbjct: 126 AMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKF 185
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVEMRSVEEASNAM LDGI+FEGAPVK+RRP+DYNPSLAA LGPSQPNPNLNL+AVGLT
Sbjct: 186 AFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGLT 245
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
PGSAGGLEGPDRIFVGGL YYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 246 PGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 305
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP-G 474
DL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL AQQQ+ +Q+ + Q G
Sbjct: 306 DLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQVGG 365
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++P+KVVCLTQVV+ DEL+DDEEY++I+EDMR+EG K+
Sbjct: 366 ALPTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYV 404
>gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
Length = 331
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/290 (85%), Positives = 273/290 (94%), Gaps = 3/290 (1%)
Query: 225 QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 284
QF L + P QAMTQQATRHARRVYVGGLPPTANE +VA +F+QVMAA+GGNTAGPGDAV
Sbjct: 13 QFTPLVIQP-QAMTQQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAV 71
Query: 285 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 344
+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGPSQPN
Sbjct: 72 LNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPN 131
Query: 345 PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETG 404
PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETG
Sbjct: 132 PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 191
Query: 405 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQI 464
NSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LLH QQQ
Sbjct: 192 NSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQA 251
Query: 465 ALQRLMLQP--GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+Q+LM Q G++P+KVVCLTQVVS DEL+DDEEYE+I++DMR+EG ++
Sbjct: 252 QMQKLMFQVGGGALPTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRY 301
>gi|413920211|gb|AFW60143.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 367
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/300 (84%), Positives = 279/300 (93%), Gaps = 1/300 (0%)
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
MFPNM P QF L + P QAMTQQATRHARRVYVGGLPP+ANEQ+VA +F+QVMAA
Sbjct: 1 MFPNMLPFGVAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAA 59
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
IGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNP
Sbjct: 60 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNP 119
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
SLAA LGPSQP+PNLNLAAVGLT GS GGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPL
Sbjct: 120 SLAAALGPSQPSPNLNLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 179
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
RGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PE
Sbjct: 180 RGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPE 239
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
QES+LL AQQQ+ LQ+L+ Q G++P+KVVCLTQVV+ADELKDDEEYE+I+EDMR E GK+
Sbjct: 240 QESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKY 299
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/318 (82%), Positives = 289/318 (90%), Gaps = 9/318 (2%)
Query: 201 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQ-----ATRHARRVYVGGLPP 255
GQ+PG+ +IPGMFPNM P GQ F L VM QAMTQQ ATRHARRVYVGGLPP
Sbjct: 189 GQLPGS--SIPGMFPNMLPFAVGQ-FNPL-VMQPQAMTQQHIFPQATRHARRVYVGGLPP 244
Query: 256 TANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI 315
TANEQSVA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI
Sbjct: 245 TANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGI 304
Query: 316 IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPY 375
+FEGAPVKVRRP+DYNPSLA+ LGPSQP+ NLNLAAVGLTPGSAGGLEGPDRIFVGGLPY
Sbjct: 305 LFEGAPVKVRRPTDYNPSLASALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPY 364
Query: 376 YFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDK 435
YFTEAQ+RELLESFG LRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDK
Sbjct: 365 YFTEAQVRELLESFGSLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDK 424
Query: 436 TLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDD 495
TLTVRRANQG+ QP+PEQE++LL AQQQ+ LQ+L+ Q G++P+KV+CLTQVV+ADELKDD
Sbjct: 425 TLTVRRANQGSAQPRPEQENILLQAQQQVQLQKLVYQVGALPTKVICLTQVVTADELKDD 484
Query: 496 EEYEEILEDMRQEGGKFA 513
EEYE+I+EDMR E GK+
Sbjct: 485 EEYEDIMEDMRLEAGKYG 502
>gi|168026451|ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682922|gb|EDQ69336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/334 (75%), Positives = 288/334 (86%), Gaps = 4/334 (1%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQ 239
GFDMAPP +A++A AA GQ+PG +PG+FP MFP QQFG +P MP QAMTQ
Sbjct: 96 GFDMAPPGAAVIAG---AAVPGQLPGMAQPMPGVFPGMFPFGGTQQFGGIPGMPAQAMTQ 152
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 299
QATRHARRVYVGGLPP ANEQ++AT+FSQVMAA+GGNTAGPGDAVVNVYIN EKKFAFVE
Sbjct: 153 QATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKFAFVE 212
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
MR+VEEASNAMALDGI+FEG V+VRRPSDYNPS+AATLGPSQP+P+LNLAAVGLTPG+A
Sbjct: 213 MRTVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGAA 272
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
GG +GPDRIFVGGLPYY TE QI+ELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +V
Sbjct: 273 GGADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 332
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 479
TD+A AALNG+KMGDKTL+VRRA+ + QPKP+Q +VL HAQQQIA+Q + P +K
Sbjct: 333 TDVAIAALNGLKMGDKTLSVRRAS-ASGQPKPDQANVLAHAQQQIAIQVFWMSPLETSTK 391
Query: 480 VVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
VV LTQVVS DELKDDEEY++ILEDM++E GK+
Sbjct: 392 VVALTQVVSPDELKDDEEYQDILEDMKEECGKYG 425
>gi|168056046|ref|XP_001780033.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668531|gb|EDQ55136.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 536
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/344 (72%), Positives = 287/344 (83%), Gaps = 11/344 (3%)
Query: 177 RISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQA 236
+ SGFDMAPP ++ GAA GQI G P +PG+FP+MFP G QFG LP MP QA
Sbjct: 131 KTSGFDMAPPGGTIVP---GAAVPGQISGMPPQMPGVFPSMFPF-GGAQFGGLPGMPAQA 186
Query: 237 MTQQ-ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
MTQQ ATRHARRVYVGGLPP ANEQ++AT+FSQVMAA+GGNTAGPGDAVVNVYIN EKKF
Sbjct: 187 MTQQQATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKF 246
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVEMR+VEEASNAM+LDGIIFEG V+VRRPSDYNPS+AATLGPSQP+P+LNLAAVGLT
Sbjct: 247 AFVEMRTVEEASNAMSLDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLT 306
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
PG+AGG +GPDRIFVGGLPYY TE QI+ELLESFGPLRGFDLVKDR+TGNSKGY FCVYQ
Sbjct: 307 PGAAGGADGPDRIFVGGLPYYLTEPQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQ 366
Query: 416 DLSV-TDIACAALNGIKMGDKTLTVRRANQ--GANQPKPEQESVLLHAQQQIALQ---RL 469
D SV TD+A AALNG+KMGDKTL+VRRA+ G QPKP+Q +VL+HAQQQIALQ ++
Sbjct: 367 DPSVTTDVAIAALNGLKMGDKTLSVRRASARYGIGQPKPDQANVLIHAQQQIALQVTLKM 426
Query: 470 MLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+L + + QVV+ ++L+DDEEY+EILEDMR E GK+
Sbjct: 427 LLHRKTFTAAWTFYAQVVTPNQLEDDEEYQEILEDMRMECGKYG 470
>gi|413920210|gb|AFW60142.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 364
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/292 (85%), Positives = 274/292 (93%), Gaps = 1/292 (0%)
Query: 221 VTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP 280
V QF L + P QAMTQQATRHARRVYVGGLPP+ANEQ+VA +F+QVMAAIGGNTAGP
Sbjct: 6 VCLNQFNPLVIQP-QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGP 64
Query: 281 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGP 340
GDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRP+DYNPSLAA LGP
Sbjct: 65 GDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGP 124
Query: 341 SQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
SQP+PNLNLAAVGLT GS GGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKD
Sbjct: 125 SQPSPNLNLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKD 184
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
RETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQES+LL A
Sbjct: 185 RETGNSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQA 244
Query: 461 QQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
QQQ+ LQ+L+ Q G++P+KVVCLTQVV+ADELKDDEEYE+I+EDMR E GK+
Sbjct: 245 QQQVQLQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKY 296
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/353 (69%), Positives = 280/353 (79%), Gaps = 28/353 (7%)
Query: 183 MAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQ----FGALPVMPVQAMT 238
MAPP +A++ GQ+PG +PG+F +MFP Q F LP MP QAMT
Sbjct: 1 MAPPGAAVVTG----TTPGQLPGITQPVPGVF-SMFPFAGTQARLLFFAGLPTMPAQAMT 55
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPP ANEQ++ATFFSQVM+AIGGNTAGPGDAVVNVYIN EKKFAFV
Sbjct: 56 QQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIGGNTAGPGDAVVNVYINQEKKFAFV 115
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMR+VEEASNAMALDGIIFEG V+VRRPSDYNPS+AATLGPSQP+P+LNLAAVGLTPG+
Sbjct: 116 EMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGA 175
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
AGG +GPDRIFVGGLPYY TE QI+ELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +
Sbjct: 176 AGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPA 235
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESV-----LLHAQQQIALQRL-- 469
VTD+ACAALNG+KMGDKTLTVRRA + QPKP+Q +V A Q++ALQ
Sbjct: 236 VTDVACAALNGLKMGDKTLTVRRATASVHSGQPKPDQANVLAQAQQQIALQKLALQGAPY 295
Query: 470 --MLQPG--------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
M+ PG P+KVVCL QVVS DELK+D+EYEEILEDMR+E GK+
Sbjct: 296 YNMMMPGVDNGMTMPETPTKVVCLKQVVSPDELKEDDEYEEILEDMREECGKY 348
>gi|388520789|gb|AFK48456.1| unknown [Lotus japonicus]
Length = 527
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/455 (58%), Positives = 327/455 (71%), Gaps = 35/455 (7%)
Query: 81 DREKSRDMDREKSRDREKDREK----DRHHRDRHRERSRERSERRKDRDDD-DHYRSRDY 135
D+ S RE +R R++D E+ DRHHRD ++ +DR + + +RSRDY
Sbjct: 19 DKSNSHGSGRESTRMRKQDGERRDFHDRHHRDY-----KDGGFNGRDRYNSYNRHRSRDY 73
Query: 136 DRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGA 195
DR D +D E RHK + S+ R R E RS SRS SRS+SKR+SGFDMAPP+ A
Sbjct: 74 DRHNDRVKDGERRHKYEAHSK-RSRGESRSPSRSPSRSESKRVSGFDMAPPS-----ADG 127
Query: 196 GAAAAGQIPGANPAIPGMFPNMFPL--VTGQQFGALPVMPVQAMTQQATRHARRVYVGGL 253
+A +GQ G N G N F L ++ Q GAL +M VQ MTQQATRHARRVY+GGL
Sbjct: 128 TSAVSGQTLGINHLNQGTAQN-FSLFGISQPQIGALSLMQVQPMTQQATRHARRVYIGGL 186
Query: 254 PPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALD 313
PP NEQS+ATFFS VM AIGGN+AG GD+VVNVYINHEKKFAF+EMR+VEEASNAM+LD
Sbjct: 187 PPLTNEQSIATFFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAFLEMRTVEEASNAMSLD 246
Query: 314 GIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGL 373
GI+FEG V+VRRP+DYNP+LAA LGP QP+P LNL+AVGL+ G+ GG +G DRIFVGGL
Sbjct: 247 GIVFEGVSVRVRRPTDYNPTLAAALGPCQPSPYLNLSAVGLSGGTIGGTDGLDRIFVGGL 306
Query: 374 PYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMG 433
PYYF E QIRELL++FGPLR FDLV+D+ETGNSKGY FC+YQD +VTD+ACA+LNG+K+G
Sbjct: 307 PYYFAEEQIRELLQAFGPLRSFDLVRDKETGNSKGYGFCIYQDPAVTDMACASLNGLKVG 366
Query: 434 DKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQ------PGS--VP-------S 478
DKTLTVRRA + K EQE + AQQ I +Q++ L+ PG VP +
Sbjct: 367 DKTLTVRRATV-SGHSKTEQEHIFAQAQQNITMQKVALEVVGLNIPGVERVPTTIDESAT 425
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
KV+CLT+ ++ DEL D+ EYEEI+EDMR E GKF
Sbjct: 426 KVLCLTEAITTDELMDNGEYEEIVEDMRDECGKFG 460
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/352 (71%), Positives = 282/352 (80%), Gaps = 27/352 (7%)
Query: 183 MAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQ----FGALPVMPVQAMT 238
MAPP +A++ GQ+PG +PG+F +MFP Q F LP MP QAMT
Sbjct: 1 MAPPGAAVVTG----TTPGQLPGITQPVPGVF-SMFPFAGTQASLLFFAGLPTMPAQAMT 55
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPP ANEQ++ATFFSQVM+AIGGNTAGPGDAVVNVYIN EKKFAFV
Sbjct: 56 QQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIGGNTAGPGDAVVNVYINQEKKFAFV 115
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMR+VEEASNAMALDGIIFEG V+VRRPSDYNPS+AATLGPSQP+P+LNLAAVGLTPG+
Sbjct: 116 EMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGA 175
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
AGG +GPDRIFVGGLPYY TE QI+ELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +
Sbjct: 176 AGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPA 235
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQESVLLHAQQQIALQRL------- 469
VTD+ACAALNG+KMGDKTLTVRRA + QPKP+Q +VL AQQQIALQ
Sbjct: 236 VTDVACAALNGLKMGDKTLTVRRATASVHSGQPKPDQANVLAQAQQQIALQLALQGAPYY 295
Query: 470 -MLQPG--------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
M+ PG P+KVVCL QVVS DELK+D+EYEEILEDMR+E GK+
Sbjct: 296 NMMMPGVDNGMTMPETPTKVVCLKQVVSPDELKEDDEYEEILEDMREECGKY 347
>gi|359497050|ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 410
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/298 (77%), Positives = 256/298 (85%), Gaps = 4/298 (1%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
SGFDMAPP +A+L GAA G++PG +PGM NMFP Q GALP+MPVQAMT
Sbjct: 44 SGFDMAPPVAALLP---GAAVPGELPGVPQMVPGMIQNMFPF-GATQLGALPLMPVQAMT 99
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPP ANEQ++ATFFSQVM AIGGN+AGPGDAVVNVYINHEKKFAFV
Sbjct: 100 QQATRHARRVYVGGLPPLANEQTIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFV 159
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
EMRSVEEASNAMALDGI+FEG V+VRRP+DYNPSLAA LGPSQP+P+LNLAAVGL PG
Sbjct: 160 EMRSVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNLAAVGLMPGV 219
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GG EGPDRIFVGGLPYYFTE QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +
Sbjct: 220 IGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPA 279
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
VTDIACAALNG+KMGDKTLTVRRA G+ Q K EQ+++L AQQ IA+Q++ LQ G +
Sbjct: 280 VTDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGL 337
>gi|242069431|ref|XP_002449992.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
gi|241935835|gb|EES08980.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
Length = 296
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/296 (78%), Positives = 260/296 (87%), Gaps = 3/296 (1%)
Query: 226 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
F L + P QAMTQ ATRHARRVYVGGLPP ANEQ+VA +F+Q+MAAIGGNTAGPGDAV+
Sbjct: 1 FNTLVIQP-QAMTQHATRHARRVYVGGLPPDANEQTVAVYFNQIMAAIGGNTAGPGDAVL 59
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
NVYINH+KKFA VEMRSVEEASNAMALDGI+FEG PVKVRRP+DYNPSLAA LGPSQP+P
Sbjct: 60 NVYINHDKKFASVEMRSVEEASNAMALDGIMFEGVPVKVRRPTDYNPSLAAALGPSQPSP 119
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
NLNLAAVGLT GS GGLE PDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKD+ETGN
Sbjct: 120 NLNLAAVGLTAGS-GGLEDPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDKETGN 178
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
SKGYAFC YQDL+VTDIACAALNGIKMGDK LTVRRANQGA+QP PEQES+LL AQQQ+
Sbjct: 179 SKGYAFCDYQDLTVTDIACAALNGIKMGDKILTVRRANQGASQPTPEQESILLQAQQQVQ 238
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFCSPTFCY 521
+Q+L G+ P+KVVCL VVSADEL +DE YE+I++DMR+E ++ TF +
Sbjct: 239 MQKLAHPVGAAPTKVVCLVHVVSADEL-EDEVYEDIMDDMREEARRYGISFITFFF 293
>gi|168030966|ref|XP_001767993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680835|gb|EDQ67268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/338 (66%), Positives = 267/338 (78%), Gaps = 15/338 (4%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
+SGFDMAPP +L A +A +GQI G FP++FP G Q G P + A+
Sbjct: 108 MSGFDMAPPGVTVLPA---SALSGQIAGMG------FPSIFPFAGGTQVGPFP-LHFHAI 157
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
TRHARRVYVGGLPP ANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYIN EK+FAF
Sbjct: 158 GLSFTRHARRVYVGGLPPMANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINQEKRFAF 217
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
VEMR+VEEASNAMALDGI++EG V+VRRPSDYNPS+AATLGPSQP+ +LNL AVGLTPG
Sbjct: 218 VEMRTVEEASNAMALDGIVYEGVSVRVRRPSDYNPSMAATLGPSQPSSHLNLTAVGLTPG 277
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
+ GG +GPDRIFVGGLPYY +E QI +LL SFG LR FDLVKDR+TGNSKGY FCVYQD
Sbjct: 278 ALGGADGPDRIFVGGLPYYLSEEQIMDLLSSFGHLRAFDLVKDRDTGNSKGYGFCVYQDP 337
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGA--NQPKPEQESVLLHAQQQIALQRLMLQPGS 475
SV DIACAALNG+KMGD+TLTVRRA+ QPKP+Q ++++ AQQQIALQ +
Sbjct: 338 SVMDIACAALNGLKMGDRTLTVRRASARLRFGQPKPDQSNIIVQAQQQIALQ---VAAPE 394
Query: 476 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+KV+CL+QVVS +LKDD E++EI+EDM++E GK+
Sbjct: 395 TATKVICLSQVVSIVDLKDDVEFDEIVEDMKEECGKYG 432
>gi|296088196|emb|CBI35712.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/308 (71%), Positives = 249/308 (80%), Gaps = 17/308 (5%)
Query: 201 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 260
G++PG +PGM NMFP Q GALP+MPVQAMTQQATRHARRVYVGGLPP ANEQ
Sbjct: 105 GELPGVPQMVPGMIQNMFPF-GATQLGALPLMPVQAMTQQATRHARRVYVGGLPPLANEQ 163
Query: 261 SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 320
++ATFFSQVM AIGGN+AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI+FE
Sbjct: 164 TIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIMFEAC 223
Query: 321 PVKV-RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 379
+ P+DYNPSLAA LGPSQP+P+LNLAAVGL PG GG EGPDRIFVGGLPYYFTE
Sbjct: 224 LTLIFSLPTDYNPSLAAALGPSQPSPHLNLAAVGLMPGVIGGAEGPDRIFVGGLPYYFTE 283
Query: 380 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTV
Sbjct: 284 EQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV 343
Query: 440 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV---------------PSKVVCLT 484
RRA G+ Q K EQ+++L AQQ IA+Q++ LQ G + P+KV+CLT
Sbjct: 344 RRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNLPGAGMAFTAIAETPTKVLCLT 403
Query: 485 QVVSADEL 492
+V S ++
Sbjct: 404 EVSSVPKI 411
>gi|302795921|ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 238/303 (78%), Gaps = 9/303 (2%)
Query: 211 PGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVM 270
PG FP + P + A MP Q MTQQATRHAR+VYVGGLP NEQ++ATFF+QVM
Sbjct: 1 PGFFPAVMPPL------AAFAMPPQTMTQQATRHARQVYVGGLPGLVNEQTIATFFNQVM 54
Query: 271 AAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY 330
+GGNTAGPGD VVNVYIN EKKFAFVEMR+VEEASNAMALDGI F+G V+VRRPSDY
Sbjct: 55 VNVGGNTAGPGDVVVNVYINQEKKFAFVEMRTVEEASNAMALDGISFQGVSVRVRRPSDY 114
Query: 331 NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFG 390
NPS+AA LGPSQP+P+LNLAAVGLTPG+ GG++GPDRIFVGGLPYY TE QIRELLESFG
Sbjct: 115 NPSVAANLGPSQPSPSLNLAAVGLTPGAGGGVDGPDRIFVGGLPYYLTEPQIRELLESFG 174
Query: 391 PLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK 450
PLRGFDLVKDRE+GNSKGY FCVYQD +VTD+ACAALNG+KMGD+TLTVRRA Q
Sbjct: 175 PLRGFDLVKDRESGNSKGYGFCVYQDPNVTDVACAALNGLKMGDRTLTVRRATANGQQAG 234
Query: 451 PEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
+ +L A+ +L + P ++V+CL + V EL +DE+++EILEDMR E G
Sbjct: 235 QDHAHILSLAK---SLTMNGVFPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECG 291
Query: 511 KFA 513
KF
Sbjct: 292 KFG 294
>gi|302813365|ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/282 (70%), Positives = 230/282 (81%), Gaps = 3/282 (1%)
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
MP Q MTQQATRHAR+VYVGGLP NEQ++ATFF+QVM +GGNTAGPGD VVNVYIN
Sbjct: 9 MPPQTMTQQATRHARQVYVGGLPGLVNEQTIATFFNQVMVNVGGNTAGPGDVVVNVYINQ 68
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
EKKFAFVEMR+VEEASNAMALDGI F+G V+VRRPSDYNPS+AA LGPSQP+P+LNLAA
Sbjct: 69 EKKFAFVEMRTVEEASNAMALDGISFQGVSVRVRRPSDYNPSVAANLGPSQPSPSLNLAA 128
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
VGLTPG+ GG++GPDRIFVGGLPYY TE QIRELLESFGPLRGFDLVKDRE+GNSKGY F
Sbjct: 129 VGLTPGAGGGVDGPDRIFVGGLPYYLTEPQIRELLESFGPLRGFDLVKDRESGNSKGYGF 188
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLML 471
CVYQD +VTD+ACAALNG+KMGD+TLTVRRA Q + +L A+ +L +
Sbjct: 189 CVYQDPNVTDVACAALNGLKMGDRTLTVRRATANGQQAGQDHAHILSLAK---SLTMNGV 245
Query: 472 QPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
P ++V+CL + V EL +DE+++EILEDMR E GKF
Sbjct: 246 FPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECGKFG 287
>gi|357446501|ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355482576|gb|AES63779.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 593
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 231/518 (44%), Positives = 289/518 (55%), Gaps = 90/518 (17%)
Query: 79 DRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRR 138
D+ + D + R R+ DR+ HRDRHR+ E + R D + R RDYDR
Sbjct: 16 DKPSSRGSGHDSTRMRRRDGDRKSFHDHRDRHRDDKYEGFKGRGKYDSYNRQRGRDYDRH 75
Query: 139 KDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRS-KSKRISGFDMAPPASAMLAAGAGA 197
DYDRDR+ R++ + S+ R + KR SGFDMAPPA+ G
Sbjct: 76 NDYDRDRDTRNRYGAHSKRSRRESRSRSRSRSPSQSEGKRTSGFDMAPPAT-----GVTP 130
Query: 198 AAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTA 257
+GQ+PG I G N P Q GAL +M VQ MTQQATRHARRVYVGGLPP A
Sbjct: 131 TVSGQMPGIAHMIQGATQNFSPYGI-SQIGALSLMQVQPMTQQATRHARRVYVGGLPPFA 189
Query: 258 NEQSVATFF----------------------------------------SQVMAAIGGNT 277
NEQS+A+FF S MA G
Sbjct: 190 NEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVEMRTVEEASNAMALDGIVF 249
Query: 278 AGPGDA-VVNVYINHEKKFAFVEMRSVEEASN-------------------------AMA 311
G G A +V + N + F VE R ++ + M
Sbjct: 250 EGIGVAPIVKMVENRLRWFGHVERRPIDSVARRVDQMEDSQMDKTIRKDLEINKLDRNMV 309
Query: 312 LD-----GIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPD 366
D +I G V+VRRP+DYNPSLAA LGP QP+ NLNL+AVGL+ G+ GG EG D
Sbjct: 310 YDRTLWRNLIHVGVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTIGGAEGLD 369
Query: 367 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 426
RIFVGGLPYYFTE Q+RELL++FGPLR FD+V+D+ETGNSKGY FC+YQD +VTDIACAA
Sbjct: 370 RIFVGGLPYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAVTDIACAA 429
Query: 427 LNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQ------PG-----S 475
LNG+KMGDKTLTVRRA A+ KPE++++ AQQ IA+Q++ L+ PG
Sbjct: 430 LNGLKMGDKTLTVRRATVSAHS-KPEEDNIFARAQQHIAMQKIALEVVGLNIPGVPTNDE 488
Query: 476 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
P+KV+CLT+ V+ ++L D+ EYEEILEDMR E KF
Sbjct: 489 SPTKVLCLTEAVTTEQLTDNGEYEEILEDMRDECRKFG 526
>gi|159473054|ref|XP_001694654.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158276466|gb|EDP02238.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 306
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/292 (60%), Positives = 213/292 (72%), Gaps = 16/292 (5%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A++QQATRHARR+YVGGLPPTA EQS+++FFS +AAIGGNTAGPG+AVVNVYIN EK F
Sbjct: 3 AVSQQATRHARRIYVGGLPPTATEQSISSFFSHALAAIGGNTAGPGNAVVNVYINREKNF 62
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVE+R+VEE SN+MALDGI+FEG V+VRRP+DYNP+ A +LGPS PNP LNLAA+GL
Sbjct: 63 AFVELRTVEETSNSMALDGIMFEGVSVRVRRPNDYNPAAAVSLGPSTPNPALNLAAIGLN 122
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
P + PDRIFVGGLPYY TE Q RELL SFG ++ FDLVKDR+TGNSKGY F VYQ
Sbjct: 123 PN-----DNPDRIFVGGLPYYLTEDQCRELLGSFGAIKSFDLVKDRDTGNSKGYGFVVYQ 177
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPG- 474
D SVTDIACA LNG+KMGD+TLTVRRA +GA L L G
Sbjct: 178 DTSVTDIACAGLNGLKMGDRTLTVRRATEGAPGGGAAPAMGPAGLGGLAGLGGLNPLAGV 237
Query: 475 ----------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFCS 516
+ +++V LT VSA+E+ DD+EY++ILEDM+ E + C+
Sbjct: 238 GGVVVNPLGLATATRIVVLTDAVSAEEIIDDQEYQDILEDMKDEASRHGLCN 289
>gi|242069429|ref|XP_002449991.1| hypothetical protein SORBIDRAFT_05g026783 [Sorghum bicolor]
gi|241935834|gb|EES08979.1| hypothetical protein SORBIDRAFT_05g026783 [Sorghum bicolor]
Length = 249
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/228 (73%), Positives = 191/228 (83%), Gaps = 1/228 (0%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P Q MT++AT RRVYVG LPP+ANEQ++ FF+QVMA IGGNTAGPGDAV + +
Sbjct: 11 PHTTTQLMTREATLFTRRVYVGDLPPSANEQTIGVFFNQVMAVIGGNTAGPGDAVCGICM 70
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
NHE++FA VE R EEASNAMALDGI+FEG PVKVRRP+DYN S AA +GP+QP+ LNL
Sbjct: 71 NHEQRFALVEFRMAEEASNAMALDGILFEGVPVKVRRPADYNLSQAAAMGPTQPSRKLNL 130
Query: 350 AAVGLTPGSA-GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKG 408
AAVGLT GSA GG E PDRIFVGGLPYY++EAQ+R+LLE GPLRGF+LVKDRETGNSKG
Sbjct: 131 AAVGLTAGSAGGGSEDPDRIFVGGLPYYYSEAQVRDLLECIGPLRGFELVKDRETGNSKG 190
Query: 409 YAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
YAFCVY D + TDIACA LNGIKMGDK LTVRRANQ A+QP+PEQES+
Sbjct: 191 YAFCVYMDTTATDIACADLNGIKMGDKILTVRRANQSASQPRPEQESI 238
>gi|384249807|gb|EIE23288.1| hypothetical protein COCSUDRAFT_23864, partial [Coccomyxa
subellipsoidea C-169]
Length = 464
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 194/361 (53%), Positives = 234/361 (64%), Gaps = 46/361 (12%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIP-GANPAIPGM-------------FPNMF------ 218
SGFD PP G G +P G P +PG+ P F
Sbjct: 59 SGFDQPPP-------GGIPPVFGGLPAGLPPGMPGVEAIAAVAAPLAAAAPTGFSNGGFS 111
Query: 219 --PLVTGQQFGALPVMP-VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 275
P + G Q G + MP VQ +QQATRHARRVYVGGLPPT NEQ++ATFFS +AAIGG
Sbjct: 112 GAPPMIGTQMGGM--MPGVQPPSQQATRHARRVYVGGLPPTGNEQNIATFFSNALAAIGG 169
Query: 276 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 335
TAGPG +VVNVYIN+EKKFAFVE R+VEE SNAMALDGI+FEG V+VRRP+DYNP+ A
Sbjct: 170 TTAGPGASVVNVYINYEKKFAFVEFRTVEETSNAMALDGIMFEGVSVRVRRPNDYNPAAA 229
Query: 336 ATLGPSQPNPNLNLAAVGLTPG---SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ LGPS PNPNLNLAA+GL G + ++ +R+FVGGLPYY E Q RELL SFG +
Sbjct: 230 SALGPSVPNPNLNLAAIGLQAGGMNAVAMIDAAERVFVGGLPYYLNEEQCRELLGSFGGI 289
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ FDLVKDRETGNSKGY F VY D +VTDIACA LNG++MG++TLTVRRA + NQ
Sbjct: 290 KSFDLVKDRETGNSKGYGFVVYTDPNVTDIACAGLNGMRMGERTLTVRRATE--NQ---- 343
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
A L P ++++ L + VS DEL +DEEY +I++DMR E KF
Sbjct: 344 -----GGAAGAATAAALSADPFPTATRILALQEAVSLDELANDEEYVDIVQDMRDEASKF 398
Query: 513 A 513
Sbjct: 399 G 399
>gi|224077136|ref|XP_002305148.1| predicted protein [Populus trichocarpa]
gi|222848112|gb|EEE85659.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 163/228 (71%), Positives = 185/228 (81%), Gaps = 15/228 (6%)
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
MR+VEEASNAMALDGIIFEG V+VRRP+DYNPSLAATLGPSQP+P LNLAAVGL PG+
Sbjct: 1 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTI 60
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G EGPDR+FVGGLPYYFTE QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +V
Sbjct: 61 SGAEGPDRVFVGGLPYYFTEIQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 120
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV--- 476
TDIACAALNG+KMGDKTLTVRRA + Q K EQE++L AQQ IA+Q++ LQ G +
Sbjct: 121 TDIACAALNGLKMGDKTLTVRRATESGGQSKSEQENILAQAQQHIAIQKMALQAGVMNLP 180
Query: 477 ------------PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
PSKV+CLT+ ++ + L DDEEYEEILEDMR+E KF
Sbjct: 181 GVGIPLAESAYTPSKVLCLTEAITMEVLADDEEYEEILEDMREECCKF 228
>gi|224125466|ref|XP_002329812.1| predicted protein [Populus trichocarpa]
gi|222870874|gb|EEF08005.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/228 (70%), Positives = 183/228 (80%), Gaps = 15/228 (6%)
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
MR+VEEASNAM LDGIIFEG V+VRRP+DYNPSLAATLGPSQP+P LNLAAVGL PG+
Sbjct: 1 MRTVEEASNAMTLDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTI 60
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G EGPDR+FVGGLPYYFTE QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +V
Sbjct: 61 SGAEGPDRVFVGGLPYYFTETQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 120
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV--- 476
TDIACAALNG+KMGDKTLTVRR + Q + EQE++L AQQ IA+Q++ LQ G +
Sbjct: 121 TDIACAALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLP 180
Query: 477 ------------PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
PSKV+CLT+ ++ + L DDEEYEEILEDMR+E KF
Sbjct: 181 GVGIPLAESSHSPSKVLCLTEAIAMEVLADDEEYEEILEDMREECCKF 228
>gi|145344032|ref|XP_001416543.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576769|gb|ABO94836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 202/283 (71%), Gaps = 13/283 (4%)
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 297
T QATRHARR+YVGG+P T NE V FF+ + A+GG G VVNVYIN EKKFAF
Sbjct: 1 TAQATRHARRIYVGGIPLTTNEADVNAFFNNALLAVGGTNGAEGQPVVNVYINVEKKFAF 60
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP- 356
VE RSVEEASNA+ALDGI+ +G PV++RRP+DYNPSLA LGPS PNP LNLAA+GL P
Sbjct: 61 VEFRSVEEASNALALDGIVLDGVPVRIRRPNDYNPSLAHDLGPSMPNPALNLAAIGLDPS 120
Query: 357 -----GSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
G G L E DRIF+GGLPY+ EAQIRELLE+FGP+R FDLV+D+ETGNSKGY
Sbjct: 121 ALQRAGVGGNLLHEHEDRIFIGGLPYFLDEAQIRELLEAFGPIRQFDLVRDKETGNSKGY 180
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
F VY+D+SVTDIAC LNG+ MGDKTLTVRRA Q +N P Q ++ +
Sbjct: 181 GFVVYEDVSVTDIACQGLNGMTMGDKTLTVRRAEQ-SNAPGGVQPGMM---NVPPPPPAI 236
Query: 470 MLQPGSVPSKVVCLTQV-VSADELKDDEEYEEILEDMRQEGGK 511
P + PS VV + ++ +EL DDEEYE I+EDM++E GK
Sbjct: 237 AAPPTNPPSTVVSFDNMGLTEEELADDEEYENIMEDMQEECGK 279
>gi|302846543|ref|XP_002954808.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
gi|300259991|gb|EFJ44214.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
Length = 532
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/293 (55%), Positives = 201/293 (68%), Gaps = 22/293 (7%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN-VYINHEKK 294
A++QQATRHARR+YVGGLPPTA EQS+++FFS +AAIGGNTAGPG + I +
Sbjct: 186 AVSQQATRHARRIYVGGLPPTATEQSISSFFSHALAAIGGNTAGPGGFPFHSTSITSPQS 245
Query: 295 FAFVEMRS-VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
+R +EE SNAMALDGI+FEG V+VRRP+DYNP+ AA+LGPS PNPNLNLAA+G
Sbjct: 246 IRSSILREFIEETSNAMALDGIMFEGVSVRVRRPNDYNPAAAASLGPSTPNPNLNLAAIG 305
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
L+ + GG + DRIFVGGLPYY TE Q RELL SFGP++ FDLVKDRETGNSKGY F V
Sbjct: 306 LSNAAGGGADQADRIFVGGLPYYLTEEQCRELLGSFGPIKSFDLVKDRETGNSKGYGFVV 365
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP 473
YQD +VTDIACA LNG++MGD+TLTVRRA E + A + P
Sbjct: 366 YQDSAVTDIACAGLNGLRMGDRTLTVRRAT----------EGAPSASGAGAAASTALGPP 415
Query: 474 GSVPSKVV----------CLTQVVSADELKDDEEYEEILEDMRQEGGKFAFCS 516
G VP+ + L +VSA+E+ D+ EYE+IL DM+ E + C+
Sbjct: 416 GLVPAALANLGVGVGVGVGLNPLVSAEEIVDNTEYEDILADMKDEASRHGLCN 468
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 156/286 (54%), Positives = 196/286 (68%), Gaps = 18/286 (6%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A+T Q TRHARR+Y+GG P ANEQ +++FF+ + A+GG T+ VVNVYIN EKKF
Sbjct: 48 AITAQTTRHARRIYLGGCPTMANEQELSSFFNDALVAVGGTTSEEA-PVVNVYINLEKKF 106
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVE RSVEE SNA+ALDG++ +G PV++RRP+DYNP +A LGPS PNP LNL A+GL
Sbjct: 107 AFVEFRSVEECSNALALDGVMIQGEPVRIRRPNDYNPQIAQGLGPSTPNPKLNLQAIGLD 166
Query: 356 PGSAG-------GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKG 408
P + E P+RIF+GGLPYY E Q+RELLE+FGP+ FDLV+D+E GNSKG
Sbjct: 167 PSALARSATTNILQEDPNRIFIGGLPYYLEEPQVRELLEAFGPIARFDLVRDKENGNSKG 226
Query: 409 YAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQR 468
Y F VYQD +VTDIAC LNG++MG+KTLTVRRA QG Q SV A
Sbjct: 227 YGFVVYQDAAVTDIACQGLNGMQMGEKTLTVRRAEQGRTDLIGGQVSVPPPPAIAPANPP 286
Query: 469 LMLQPGSVPSKVVCLTQV-VSADELKDDEEYEEILEDMRQEGGKFA 513
S+VV T + ++ +EL DDEE+E I+EDM +E GK+
Sbjct: 287 ---------SEVVSFTNMGITEEELADDEEFENIMEDMNEECGKYG 323
>gi|255073589|ref|XP_002500469.1| RNA binding protein [Micromonas sp. RCC299]
gi|226515732|gb|ACO61727.1| RNA binding protein [Micromonas sp. RCC299]
Length = 489
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 184/367 (50%), Positives = 224/367 (61%), Gaps = 49/367 (13%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
I G D+ PP + AGA + +G PG A PG G PV
Sbjct: 75 IGGADI-PPGMNVSVAGAPSGFSGPPPGYANAHPG------------NLGLNPVP----- 116
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG-PGDAVVNVYINHEKKFA 296
QQATRHARRVYVG LP T E VA FF+ M AIGG A PGD V+NVYIN+EKKFA
Sbjct: 117 NQQATRHARRVYVGNLPGTVTEPKVAAFFNNAMHAIGGTVAALPGDPVLNVYINYEKKFA 176
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
FVE R+VEE SN MALDG + EG ++VRRP+DYN A++LGPSQP LNL A+GL P
Sbjct: 177 FVEFRTVEETSNCMALDGAVLEGIAMRVRRPNDYNVMAASSLGPSQPKDGLNLEAIGLNP 236
Query: 357 GSA---------GGLEGPD---RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETG 404
+A L D R+F+GGLPY+ TE ++EL+E+FGP + F LV DRETG
Sbjct: 237 AAAGGGGAGAANASLTEEDLQHRLFIGGLPYFLTETMVKELVEAFGPTKQFQLVVDRETG 296
Query: 405 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ-GANQPKPEQESV-----LL 458
NSKGY F VYQD SVTD+AC L+G+KMG+K+LTV+RA Q GA PKP SV L
Sbjct: 297 NSKGYGFFVYQDHSVTDVACQGLHGMKMGEKSLTVQRAMQGGAGAPKPTAASVGPGHTAL 356
Query: 459 HAQQQIA--LQRLMLQPG--SVP--------SKVVCLTQVVSADELKDDEEYEEILEDMR 506
++A L P SVP S+VV LT+++ +EL+DD EY EI+EDMR
Sbjct: 357 PGADEVAAHLAGASGAPAGLSVPPPPSEHPASRVVSLTEMLDVEELRDDVEYGEIMEDMR 416
Query: 507 QEGGKFA 513
+E GKF
Sbjct: 417 EECGKFG 423
>gi|110741990|dbj|BAE98934.1| splicing factor like protein [Arabidopsis thaliana]
Length = 341
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 226/320 (70%), Gaps = 11/320 (3%)
Query: 9 EDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDR 68
ED + N + Y+ + + +D DSKP+ SRD+ERE+SRS+++E+EKGRD+DR
Sbjct: 5 EDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDR 64
Query: 69 DRDRDRTR-EKDRDREKSRDMDREKSRDREKDREKDRHHRD-RHRERSRERSERRKDRDD 126
+RD + +R +DRD EKS+ E+SRD+++D ++RHHR RHR+ SRER ERR+
Sbjct: 65 ERDSEVSRRSRDRDGEKSK----ERSRDKDRD-HRERHHRSSRHRDHSRERGERRERGGR 119
Query: 127 DDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPP 186
DD R DR D RD + R R +R+SGFDMAPP
Sbjct: 120 DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPP 179
Query: 187 ASAMLAAGAGAAAAGQIPGANPAIPG--MFPNMFPLVTGQQFGALPVMPVQAMTQQATRH 244
ASA AGAA GQ+P A P +PG MFPNMFPL TGQ FG L +MP+QAMTQQATRH
Sbjct: 180 ASA--MLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRH 237
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
Sbjct: 238 ARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 297
Query: 305 EASNAMALDGIIFEGAPVKV 324
EASNAM+LDGIIFEGAPVKV
Sbjct: 298 EASNAMSLDGIIFEGAPVKV 317
>gi|302813497|ref|XP_002988434.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
gi|300143836|gb|EFJ10524.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
Length = 339
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/295 (49%), Positives = 189/295 (64%), Gaps = 19/295 (6%)
Query: 219 PLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA 278
P+V LPV+ Q T+ ARRVYVGGLP +E +ATFF+ MA I GNT
Sbjct: 1 PVVLPAGIAQLPVVLRMPQMPQITKPARRVYVGGLPAVVDEARIATFFNHAMAVIEGNTY 60
Query: 279 GPG-DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT 337
G G DAVV+V+I+H K +AFVEMRSVEEASNAMALDGIIFEG+ V++RRPS+YNP A
Sbjct: 61 GQGGDAVVSVFIDHAKNYAFVEMRSVEEASNAMALDGIIFEGSQVRIRRPSNYNPEHAML 120
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
G SQP+P+L L VGL + +GPDRIF+GGLPY + +A++R+LLE FG LR D+
Sbjct: 121 FGSSQPSPSLRLDKVGLVYRAHA--DGPDRIFIGGLPYEWGDAEVRQLLEPFGALRALDI 178
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD T SKGY F VY++ + TD ACAALN + K L V RA + P
Sbjct: 179 VKDSYTRKSKGYGFAVYENPASTDAACAALNQKPLEGKILRVHRATNSSGNPA------- 231
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L+ Q + ++VVCL VS + L+D++EY EI+EDM++E GK+
Sbjct: 232 ---------LVLLPQSSELGTRVVCLCNAVSEEMLRDEKEYAEIIEDMKEECGKY 277
>gi|302796203|ref|XP_002979864.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
gi|300152624|gb|EFJ19266.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
Length = 325
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 186/285 (65%), Gaps = 25/285 (8%)
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG-DAVVNV 287
+P MP Q T+ ARRVYVGGLP +E +ATFF+ MA I GNT G G DAVV+V
Sbjct: 1 MPQMP------QITKPARRVYVGGLPAVVDEARIATFFNHAMAVIEGNTYGQGGDAVVSV 54
Query: 288 YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL 347
+I+H K +AFVEMRSVEEASNAMALDGIIFEG+ V++RRPS+YNP A G SQP+P+L
Sbjct: 55 FIDHAKNYAFVEMRSVEEASNAMALDGIIFEGSQVRIRRPSNYNPEHAMLFGSSQPSPSL 114
Query: 348 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
L VGL + +GPDRIF+GGLPY + +A++R+LLE FG LR D+VKD T SK
Sbjct: 115 RLDKVGLVYRAHA--DGPDRIFIGGLPYEWGDAEVRQLLEPFGALRALDIVKDSYTRKSK 172
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
GY F VY++ + TD ACAALN + K L V RA + P
Sbjct: 173 GYGFAVYENPASTDAACAALNQKPLEGKILRVHRATNSSGNPA----------------L 216
Query: 468 RLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L+ Q + ++VVCL VS + L+D++EY EI+EDM++E GK+
Sbjct: 217 VLLPQSSELGTRVVCLCNAVSEEMLRDEKEYAEIIEDMKEECGKY 261
>gi|303273844|ref|XP_003056274.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226462358|gb|EEH59650.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 564
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 206/348 (59%), Gaps = 65/348 (18%)
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG---NTAGPG-DAV 284
+PV + QATRHARR+YVGGLP TANE S ATFFS +AAIGG A G + V
Sbjct: 147 VPVPAGAPASTQATRHARRIYVGGLPATANEASTATFFSNALAAIGGVVQTAAAAGVEPV 206
Query: 285 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 344
+NVY+NHEKKFAFVE R+VEE SNA+ALDG++F+G ++VRRP+DYN ++AATLGPS P+
Sbjct: 207 LNVYMNHEKKFAFVEFRTVEETSNAIALDGVVFDGVSLRVRRPNDYNAAIAATLGPSTPS 266
Query: 345 PNLNLAAVGLTPGSAGGL------------------EGPDRIFVGGLPYYFTEAQIRELL 386
+L+LAA+GL PG+ G + +R+FVGGLPY+ TE ++EL+
Sbjct: 267 TDLDLAAIGLVPGAGGAAGGAGAGGAAGGQNNLSPEDTANRLFVGGLPYFLTEPMVKELV 326
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
E+FGP + F LV DRETGNSKGY F VYQD +VTD+AC L+G+KMG+KTLTVRRA
Sbjct: 327 EAFGPTKHFMLVMDRETGNSKGYGFFVYQDHAVTDVACQGLHGMKMGEKTLTVRRATGAG 386
Query: 447 NQPK--------------------PEQESVLLHAQQQIALQRLMLQPGSVPSKV------ 480
E E ++ R + G+ S
Sbjct: 387 GGAAGATNASGLAGGAGGAPSTRVAEAEDATTGGERAARAPRGAMPRGAXASLTARFLSC 446
Query: 481 -VCLT----------QVVSADE------LKDDEEYEEILEDMRQEGGK 511
CLT +V+S ++ L+DD EY EI EDMR+E GK
Sbjct: 447 RCCLTDPPPPSNPPSRVLSLNDMLDVEDLRDDVEYGEITEDMREECGK 494
>gi|348510223|ref|XP_003442645.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 467
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 233/429 (54%), Gaps = 35/429 (8%)
Query: 87 DMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
+ +++ S +R+ DRE R+RH++RSR S R D+ +RS DR R
Sbjct: 6 EFEKQLSENRQADRE-----RERHKKRSRSGSPGRGDK-----HRSWSKDRGSRSREKRS 55
Query: 147 DRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGF-DMAPPASAMLAAGAGAA--AAGQI 203
R+S+ R +H+ S S R++ KR + D+ PP + A AAGQI
Sbjct: 56 RSRDRKSRDRRSSSRDHKKHSHSPRRTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQI 115
Query: 204 PGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVA 263
P + T A P V + Q TR ARR+YVG +P E+S+A
Sbjct: 116 PTIA---------LLATSTTTGVAAAPTQ-VPIVGSQMTRQARRLYVGNIPFGVTEESMA 165
Query: 264 TFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVK 323
FF+ M + G + P + V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K
Sbjct: 166 EFFNAQMR-LAGLSQAPSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLK 224
Query: 324 VRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIR 383
+RRP DY P + P+ P + V + P ++F+GGLP Y + Q++
Sbjct: 225 IRRPHDYRPLPGISEQPAFHVPGVVSTVVP---------DSPHKLFIGGLPNYLNDDQVK 275
Query: 384 ELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRAN 443
ELL SFGPL+ F+LVKD T SKGYAFC Y D+S TD A A LNG+++GDK L V+RA+
Sbjct: 276 ELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRAS 335
Query: 444 QGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILE 503
GA P Q LQR LQ +P++V+CL +V +EL DDE+YEEILE
Sbjct: 336 VGAKNANPTSIIETPVTLQVPGLQR--LQNSGMPTEVLCLLNMVMPEELVDDEDYEEILE 393
Query: 504 DMRQEGGKF 512
D+R+E K+
Sbjct: 394 DIREECCKY 402
>gi|359497129|ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 238
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 135/169 (79%), Gaps = 15/169 (8%)
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
GG EGPDRIFVGGLPYYFTE QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +V
Sbjct: 3 GGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 62
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV--- 476
TDIACAALNG+KMGDKTLTVRRA G+ Q K EQ+++L AQQ IA+Q++ LQ G +
Sbjct: 63 TDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNLP 122
Query: 477 ------------PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
P+KV+CLT+V++ DEL+DDE YEEILEDMR EGGKF
Sbjct: 123 GAGMAFTAIAETPTKVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFG 171
>gi|412990165|emb|CCO19483.1| predicted protein [Bathycoccus prasinos]
Length = 495
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 192/315 (60%), Gaps = 41/315 (13%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG----NTAGPGDAVVNVYINHEKKF 295
QATRHARRVYVGG PP +E VA FF+ + A+GG T G + VVNVY+NHEK F
Sbjct: 121 QATRHARRVYVGGFPPNVSEVRVADFFNNALMAVGGIAETQTEGNANPVVNVYMNHEKHF 180
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AFVE R+ EE SN MALD I F+ + ++VRRP+DYN A LGP PN +NL A+GL+
Sbjct: 181 AFVEFRNAEETSNCMALDSISFDSSQLRVRRPNDYNQPAAMKLGPIVPNIKMNLEAIGLS 240
Query: 356 ----------------PGSAGG--LEGP--DRIFVGGLPYYFTEAQIRELLESFGPLRGF 395
G+A G + P DR+FVGGLPY+ TEAQIRELLE+FGP+ F
Sbjct: 241 NEVLQRMQSGVASGQNNGNANGSNVADPNEDRVFVGGLPYFLTEAQIRELLEAFGPITRF 300
Query: 396 DLVKDRETGNSKGYAFCVYQD-LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 454
DLV+DR+TG SKGY F VY+D ++TDIA L+G++MGDK LTVRRAN + + EQ
Sbjct: 301 DLVRDRDTGGSKGYGFVVYRDGPAITDIAIQGLHGMQMGDKQLTVRRANATLERMQQEQR 360
Query: 455 SVLLHAQQQI-------ALQRLMLQPGSVPSKVV------CLT---QVVSADELKDDEEY 498
+ L QQQ A + + Q + + V CL + +EL D EEY
Sbjct: 361 AALQQQQQQHQLLGNGGAAAQFLPQSAAPAAPEVDENATECLVLKNMGIKDEELNDPEEY 420
Query: 499 EEILEDMRQEGGKFA 513
E I+ED ++E KF
Sbjct: 421 EIIVEDTQEECEKFG 435
>gi|45387787|ref|NP_991252.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
gi|41389016|gb|AAH65869.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
Length = 475
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 213/372 (57%), Gaps = 25/372 (6%)
Query: 145 REDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQ 202
+E RH+R +++ + E+ SRS R + K + +D+ PP + A AAGQ
Sbjct: 61 KERRHRRSDHTQNHPQ-ENVSRSPHREKKKKIKKY-WDVPPPGFEHITPMQYKAMQAAGQ 118
Query: 203 IPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV 262
IP A +P M P+ A+ PV + Q TR ARR+YVG +P E+S+
Sbjct: 119 IP-ATALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESM 168
Query: 263 ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 322
FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+ +
Sbjct: 169 MDFFNAQM-RLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQAQSL 227
Query: 323 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 382
K+RRP DY P + PS P + V P S ++F+GGLP Y + Q+
Sbjct: 228 KIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSI------HKLFIGGLPNYLNDDQV 278
Query: 383 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
+ELL SFGPL+ F+LVKD TG SKGYAFC Y D++V D A A LNG+++ DK L V+RA
Sbjct: 279 KELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVNDQAIAGLNGMQLADKKLLVQRA 338
Query: 443 NQGA-NQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEI 501
+ GA N + Q M+Q G +P++V+CL +V+ +EL DDEEYEEI
Sbjct: 339 SVGAKNATMTSINETPVTLQVPGLTSNPMIQMGGIPTEVLCLMNMVAPEELIDDEEYEEI 398
Query: 502 LEDMRQEGGKFA 513
+ED+++E K+
Sbjct: 399 VEDVKEECSKYG 410
>gi|348510221|ref|XP_003442644.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 467
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/407 (39%), Positives = 221/407 (54%), Gaps = 31/407 (7%)
Query: 110 HRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRS 169
H++RSR S R D+ +RS DR R R+S+ R +H+ S S
Sbjct: 23 HKKRSRSGSPGRGDK-----HRSWSKDRGSRSREKRSRSRDRKSRDRRSSSRDHKKHSHS 77
Query: 170 RSRSKSKRISGF-DMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQF 226
R++ KR + D+ PP + A AAGQIP + T
Sbjct: 78 PRRTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIA---------LLATSTTTGV 128
Query: 227 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN 286
A P V + Q TR ARR+YVG +P E+S+A FF+ M + G + P + V+
Sbjct: 129 AAAPTQ-VPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLA 186
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 346
V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P + P+ P
Sbjct: 187 VQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHVPG 246
Query: 347 LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 406
+ V + P ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD T S
Sbjct: 247 VVSTVVP---------DSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLS 297
Query: 407 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQI-A 465
KGYAFC Y D+S TD A A LNG+++GDK L V+RA+ GA P S Q+
Sbjct: 298 KGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPVSTSGNTPVTLQVPG 357
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
LQR LQ +P++V+CL +V +EL DDE+YEEILED+R+E K+
Sbjct: 358 LQR--LQNSGMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKY 402
>gi|297736736|emb|CBI25913.3| unnamed protein product [Vitis vinifera]
Length = 6467
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 135/169 (79%), Gaps = 15/169 (8%)
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
GG EGPDRIFVGGLPYYFTE QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +V
Sbjct: 6232 GGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 6291
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV--- 476
TDIACAALNG+KMGDKTLTVRRA G+ Q K EQ+++L AQQ IA+Q++ LQ G +
Sbjct: 6292 TDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNLP 6351
Query: 477 ------------PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
P+KV+CLT+V++ DEL+DDE YEEILEDMR EGGKF
Sbjct: 6352 GAGMAFTAIAETPTKVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFG 6400
>gi|348510219|ref|XP_003442643.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 466
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 160/406 (39%), Positives = 219/406 (53%), Gaps = 30/406 (7%)
Query: 110 HRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRS 169
H++RSR S R D+ +RS DR R R+S+ R +H+ S S
Sbjct: 23 HKKRSRSGSPGRGDK-----HRSWSKDRGSRSREKRSRSRDRKSRDRRSSSRDHKKHSHS 77
Query: 170 RSRSKSKRISGF-DMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQF 226
R++ KR + D+ PP + A AAGQIP + T
Sbjct: 78 PRRTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIA---------LLATSTTTGV 128
Query: 227 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN 286
A P V + Q TR ARR+YVG +P E+S+A FF+ M + G + P + V+
Sbjct: 129 AAAPTQ-VPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLA 186
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 346
V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P + P+ P
Sbjct: 187 VQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHVPG 246
Query: 347 LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 406
+ V + P ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD T S
Sbjct: 247 VVSTVVP---------DSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLS 297
Query: 407 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIAL 466
KGYAFC Y D+S TD A A LNG+++GDK L V+RA+ GA P Q L
Sbjct: 298 KGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGL 357
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
QR LQ +P++V+CL +V +EL DDE+YEEILED+R+E K+
Sbjct: 358 QR--LQNSGMPTEVLCLLNMVMPEELVDDEDYEEILEDIREECCKY 401
>gi|147902896|ref|NP_001080595.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus laevis]
gi|111185517|gb|AAH44032.2| U2af2 protein [Xenopus laevis]
Length = 456
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 199/343 (58%), Gaps = 23/343 (6%)
Query: 174 KSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFGALP 230
K K+I +D+ PP + A AAGQIP A +P M P+ A+
Sbjct: 69 KKKKIRKYWDIPPPGFEHITPLQYKAMQAAGQIP-ATALLPTMTPDGL---------AVT 118
Query: 231 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
PV + Q TR ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN
Sbjct: 119 PTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQIN 177
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
+K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P + PS P +
Sbjct: 178 QDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVST 237
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
V P SA ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYA
Sbjct: 238 VV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYA 288
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y D++VTD A A LNG+++GDK L V+RA+ GA + Q L
Sbjct: 289 FCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQ 348
Query: 471 LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+Q G P++V+CL +V +EL DD+EYEEI+ED+R E GK+
Sbjct: 349 VQMGGHPTEVLCLMNMVVPEELIDDDEYEEIVEDVRDECGKYG 391
>gi|47575746|ref|NP_001001217.1| U2 small nuclear RNA auxiliary factor 2 isoform 2 [Xenopus
(Silurana) tropicalis]
gi|45709722|gb|AAH67966.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
[Xenopus (Silurana) tropicalis]
Length = 456
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 199/343 (58%), Gaps = 23/343 (6%)
Query: 174 KSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFGALP 230
K K+I +D+ PP + A AAGQIP A +P M P+ A+
Sbjct: 69 KKKKIRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPTMTPDGL---------AVT 118
Query: 231 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
PV + Q TR ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN
Sbjct: 119 PTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQIN 177
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
+K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P + PS P +
Sbjct: 178 QDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVST 237
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
V P SA ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYA
Sbjct: 238 VV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYA 288
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y D++VTD A A LNG+++GDK L V+RA+ GA + Q L
Sbjct: 289 FCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQ 348
Query: 471 LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+Q G P++V+CL +V +EL DD+EYEEI+ED+R E GK+
Sbjct: 349 VQMGGHPTEVLCLMNMVLPEELLDDDEYEEIVEDVRDECGKYG 391
>gi|325191172|emb|CCA25959.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 553
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 183/286 (63%), Gaps = 23/286 (8%)
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVM-AAIGGNTAGPGDAVVNVYINHEKKF 295
M QQ TRHARR+YVGG+ NE ++ FF+ V+ A+G G AVV+VYIN E+ F
Sbjct: 207 MAQQ-TRHARRIYVGGIG-EVNETEISAFFNDVIDRALGERQEG--GAVVSVYINRERHF 262
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT-LGPSQPNPNLNLAAVGL 354
AFVE++S+E + M LDGI F G P+KVRRP+DYNP L LGP P LNLAA+G+
Sbjct: 263 AFVELKSIELTTACMNLDGIAFRGQPLKVRRPNDYNPGLVPKDLGPI---PALNLAALGI 319
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
S +GP ++F+GG+PY+ TE QI+ELL++FGPL+ F LVKD T SKGYAFC Y
Sbjct: 320 V--STTVQDGPGKVFIGGIPYHLTEEQIKELLQAFGPLKSFHLVKDLTTNLSKGYAFCEY 377
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRR------ANQGANQPKPEQESVLL------HAQQ 462
D VTD AC LN +K+GD+TLTVRR A AN V + A Q
Sbjct: 378 MDSGVTDAACIGLNDMKLGDRTLTVRRALSQESAKVIANAAGTVNAGVEMGLDPSRAAMQ 437
Query: 463 QIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
I++ + L P PS+V+ L +V+ +EL+D++EY +I++D+R E
Sbjct: 438 TISMAGVHLGPIGSPSRVLVLRNMVTPEELEDEDEYRDIMDDIRSE 483
>gi|62859443|ref|NP_001016998.1| U2 small nuclear RNA auxiliary factor 2 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|89269799|emb|CAJ83531.1| U2 (RNU2) small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
gi|115292148|gb|AAI22001.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
Length = 465
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 199/352 (56%), Gaps = 32/352 (9%)
Query: 174 KSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFGALP 230
K K+I +D+ PP + A AAGQIP A +P M P+ A+
Sbjct: 69 KKKKIRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPTMTPDGL---------AVT 118
Query: 231 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
PV + Q TR ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN
Sbjct: 119 PTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQIN 177
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
+K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P + PS P +
Sbjct: 178 QDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVST 237
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI---------RELLESFGPLRGFDLVKDR 401
V P SA ++F+GGLP Y + Q+ +ELL SFGPL+ F+LVKD
Sbjct: 238 VV---PDSA------HKLFIGGLPNYLNDDQVTMESLSLWVKELLTSFGPLKAFNLVKDS 288
Query: 402 ETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQ 461
TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA +
Sbjct: 289 ATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTL 348
Query: 462 QQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q L +Q G P++V+CL +V +EL DD+EYEEI+ED+R E GK+
Sbjct: 349 QVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDDEYEEIVEDVRDECGKYG 400
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 185/299 (61%), Gaps = 26/299 (8%)
Query: 221 VTGQQFGAL-----PVMPV-QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIG 274
V G F AL PV P Q TQQAT+HARR+YVG LP E VA FF+ +
Sbjct: 178 VGGLDFSALSQYMIPVAPTTQPNTQQATKHARRLYVGNLPSDVTESEVADFFNSALYLAK 237
Query: 275 GNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSL 334
G PGD V +VY+N +K+FAF+E+ S EA+ A+ +DG++F G +++RRP+DYNP++
Sbjct: 238 GVDV-PGDPVQSVYLNLDKRFAFIELNSAAEAAAAIQMDGVLFRGMSLRMRRPNDYNPNI 296
Query: 335 AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 394
A P P + +A+G+ S +GPD++F+GGLPY+ TE QI+E+L S+GPL
Sbjct: 297 HA---PVYPPIGFDPSALGVV--STQVPDGPDKVFIGGLPYHLTEDQIKEILSSYGPLNA 351
Query: 395 FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 454
F+LVKD TG SKGYAF Y+D S+ + A LNG+ MGDKTLTVRRA+Q ++
Sbjct: 352 FNLVKDPNTGLSKGYAFFQYKDPSIVEAAIKGLNGMTMGDKTLTVRRASQVSS------- 404
Query: 455 SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ L + P++++ L +V +EL DDEEYE+I+ED+R+E K+
Sbjct: 405 -------GSVELGQSFSPTVRYPTRILELRNMVEPEELVDDEEYEDIIEDVREESSKYG 456
>gi|410903107|ref|XP_003965035.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 461
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/284 (45%), Positives = 177/284 (62%), Gaps = 22/284 (7%)
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
V + Q TR ARR+YVG +P E+S+A FF+ M + G + P + V+ V IN +K
Sbjct: 130 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 188
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
FAF+E RSV+E + AMA DGIIF+G +K+RRP DY +P P ++ V
Sbjct: 189 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY-----------RPLPGISEQPVF 237
Query: 354 LTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
PG + + P ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD T SKGYAF
Sbjct: 238 HVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAF 297
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA---QQQIALQR 468
C Y D+S TD A A LNG+++GDK L V+RA+ GA P S ++ A Q LQR
Sbjct: 298 CEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVGAKNANP---SAIIEAPVTLQVPGLQR 354
Query: 469 LMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
LQ +P++V+CL +V +EL DD++YEEILED+R+E K+
Sbjct: 355 --LQNSGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKY 396
>gi|410903105|ref|XP_003965034.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 454
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/284 (45%), Positives = 177/284 (62%), Gaps = 22/284 (7%)
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
V + Q TR ARR+YVG +P E+S+A FF+ M + G + P + V+ V IN +K
Sbjct: 123 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 181
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
FAF+E RSV+E + AMA DGIIF+G +K+RRP DY +P P ++ V
Sbjct: 182 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY-----------RPLPGISEQPVF 230
Query: 354 LTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
PG + + P ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD T SKGYAF
Sbjct: 231 HVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAF 290
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA---QQQIALQR 468
C Y D+S TD A A LNG+++GDK L V+RA+ GA P S ++ A Q LQR
Sbjct: 291 CEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVGAKNANP---SAIIEAPVTLQVPGLQR 347
Query: 469 LMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
LQ +P++V+CL +V +EL DD++YEEILED+R+E K+
Sbjct: 348 --LQNSGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKY 389
>gi|410903103|ref|XP_003965033.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 446
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 128/284 (45%), Positives = 177/284 (62%), Gaps = 22/284 (7%)
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
V + Q TR ARR+YVG +P E+S+A FF+ M + G + P + V+ V IN +K
Sbjct: 115 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 173
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
FAF+E RSV+E + AMA DGIIF+G +K+RRP DY +P P ++ V
Sbjct: 174 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY-----------RPLPGISEQPVF 222
Query: 354 LTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
PG + + P ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD T SKGYAF
Sbjct: 223 HVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAF 282
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA---QQQIALQR 468
C Y D+S TD A A LNG+++GDK L V+RA+ GA P S ++ A Q LQR
Sbjct: 283 CEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVGAKNANP---SAIIEAPVTLQVPGLQR 339
Query: 469 LMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
LQ +P++V+CL +V +EL DD++YEEILED+R+E K+
Sbjct: 340 --LQNSGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKY 381
>gi|432908699|ref|XP_004077990.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oryzias latipes]
Length = 479
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 212/377 (56%), Gaps = 36/377 (9%)
Query: 145 REDRHKRRS-----QSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAA 199
+E RH+R S Q + RS HR + + + GF+ P A
Sbjct: 66 KERRHRRNSPPAYPQENTASRSPHREKKKKIKKYWDVPPPGFEHITPMQY-----KAMQA 120
Query: 200 AGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 259
AGQIP A +P M P+ A+ PV + Q TR ARR+YVG +P E
Sbjct: 121 AGQIP-ATALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITE 170
Query: 260 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 319
+S+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G
Sbjct: 171 ESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQG 229
Query: 320 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 379
+K+RRP DY P + PS P + V P SA ++F+GGLP Y +
Sbjct: 230 QSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLND 280
Query: 380 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A LNG+++GDK L V
Sbjct: 281 DQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLV 340
Query: 440 RRANQG---ANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDE 496
+RA+ G A Q V L Q L + Q G +P++V+CL +V+ +EL DDE
Sbjct: 341 QRASVGSKNATLTSINQTPVTL---QVPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDE 397
Query: 497 EYEEILEDMRQEGGKFA 513
EYEEI+ED+R+E GK+
Sbjct: 398 EYEEIVEDVREECGKYG 414
>gi|291190480|ref|NP_001167275.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
gi|223648990|gb|ACN11253.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
Length = 474
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 237/437 (54%), Gaps = 42/437 (9%)
Query: 87 DMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
D D + E +E+D+ +R R SR S RK R + K+
Sbjct: 3 DFDEFERLLTENKKERDKENRHGWRTPSRSLSRERKKRCRERRKSRESRSDSKE-----R 57
Query: 147 DRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQI 203
RH+R Q++ + + SRS + R K K++ +D+ P + A AAGQI
Sbjct: 58 RRHRRSIQTQKQSQETVVSRSPALHREKKKKVRKYWDVPAPGFEHITPLQYKAMQAAGQI 117
Query: 204 PGANPAIPGMFPNMFPLVTGQQFGALPVMP--VQAMTQQATRHARRVYVGGLPPTANEQS 261
P + P M +T + LP P V + Q TR ARR+YVG +P E++
Sbjct: 118 PAT-----ALLPTM---ITPE---GLPPAPTSVPVVGSQMTRQARRLYVGNIPFGITEEA 166
Query: 262 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 321
+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G
Sbjct: 167 MMDFFNAQMC-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQS 225
Query: 322 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
+K+RRP DY P + PS P + V P SA ++F+GGLP Y + Q
Sbjct: 226 LKIRRPHDYQPLPGMSESPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQ 276
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
++ELL SFGPL+ F+LVKD T SKGYAFC Y D+++ D A A LNG+++GDK L V+R
Sbjct: 277 VKELLTSFGPLKAFNLVKDSATALSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQR 336
Query: 442 ANQGANQPKPEQESVLLHAQQQIALQRLMLQP------GSVPSKVVCLTQVVSADELKDD 495
A+ GA + ++ Q + LQ L P G +P++V+CL +V+ +EL DD
Sbjct: 337 ASVGA-----KNAALTGMNQTPVTLQVPGLMPTSMASLGGLPTEVLCLMNMVAVEELLDD 391
Query: 496 EEYEEILEDMRQEGGKF 512
EEYEEI+ED+R E GK+
Sbjct: 392 EEYEEIVEDVRDECGKY 408
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 186/314 (59%), Gaps = 40/314 (12%)
Query: 221 VTGQQFGAL-----PVMPV-QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIG 274
V G F AL PV P Q TQQAT+HARR+YVG LP E VA FF+ +
Sbjct: 178 VGGLDFSALSQYMIPVAPTTQPNTQQATKHARRLYVGNLPSDVTESEVADFFNSALYLAK 237
Query: 275 GNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSL 334
G PGD V +VY+N +K+FAF+E+ S EA+ A+ +DG++F G +++RRP+DYNP++
Sbjct: 238 GVDV-PGDPVQSVYLNLDKRFAFIELNSAAEAAAAIQMDGVLFRGMSLRMRRPNDYNPNI 296
Query: 335 AATLGPSQPNPNLNLAA----------VGLTPGSAGGL-----EGPDRIFVGGLPYYFTE 379
A + P P L +G P + G + +GPD++F+GGLPY+ TE
Sbjct: 297 HAPVYP----PVCQLLTCFLGYIEKFQIGFDPSALGVVSTQVPDGPDKVFIGGLPYHLTE 352
Query: 380 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
QI+E+L S+GPL F+LVKD TG SKGYAF Y+D S+ + A LNG+ MGDKTLTV
Sbjct: 353 DQIKEILSSYGPLNAFNLVKDPNTGLSKGYAFFQYKDPSIVEAAIKGLNGMTMGDKTLTV 412
Query: 440 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE 499
RRA+Q ++ + L + P++++ L +V +EL DDEEYE
Sbjct: 413 RRASQVSS--------------GSVELGQSFSPTVRYPTRILELRNMVEPEELVDDEEYE 458
Query: 500 EILEDMRQEGGKFA 513
+I+ED+R+E K+
Sbjct: 459 DIIEDVREESSKYG 472
>gi|440900150|gb|ELR51345.1| Splicing factor U2AF 65 kDa subunit, partial [Bos grunniens mutus]
Length = 411
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 219/393 (55%), Gaps = 25/393 (6%)
Query: 153 SQSRSRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANP 208
S+ +RG + EH RS K K++ +D+ PP + A AAGQIP A
Sbjct: 1 SKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATA 59
Query: 209 AIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ 268
+P M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+
Sbjct: 60 LLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNA 110
Query: 269 VMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPS 328
M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP
Sbjct: 111 QMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPH 169
Query: 329 DYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLES 388
DY P + PS P + V P SA ++F+GGLP Y + Q++ELL S
Sbjct: 170 DYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTS 220
Query: 389 FGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ 448
FGPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 221 FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKN 280
Query: 449 PKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 281 ATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDE 340
Query: 509 GGKFAFCSPTFCYKESGLIYTDRRLHNPQFVYF 541
GK+ +++ ++T L FV F
Sbjct: 341 CGKYGLVKSIEIPRQA-WVFTSLILFLQIFVEF 372
>gi|115496604|ref|NP_001068804.1| splicing factor U2AF 65 kDa subunit [Bos taurus]
gi|89994093|gb|AAI14161.1| U2 small nuclear RNA auxiliary factor 2 [Bos taurus]
gi|296477253|tpg|DAA19368.1| TPA: U2 (RNU2) small nuclear RNA auxiliary factor 2 [Bos taurus]
Length = 475
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 211/367 (57%), Gaps = 28/367 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLV 345
Query: 452 EQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 346 SPLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDE 405
Query: 509 GGKFAFC 515
GK+
Sbjct: 406 CGKYGLV 412
>gi|410351435|gb|JAA42321.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 471
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 233/423 (55%), Gaps = 24/423 (5%)
Query: 97 EKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSR 156
E +R+ + + ++R +E + + R D RSR DRR R +RRS+
Sbjct: 6 EFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSPDRRNRDQRSASRDRRRRSKPL 65
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 345
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 346 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 405
Query: 513 AFC 515
Sbjct: 406 GLV 408
>gi|432908697|ref|XP_004077989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oryzias latipes]
Length = 474
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 213/381 (55%), Gaps = 40/381 (10%)
Query: 145 REDRHKRRS---------QSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGA 195
+E RH+R+S ++ RS HR + + + GF+ P
Sbjct: 57 KERRHRRKSVHLHQSSCLKTSCYVRSPHREKKKKIKKYWDVPPPGFEHITPMQY-----K 111
Query: 196 GAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPP 255
AAGQIP A +P M P+ A+ PV + Q TR ARR+YVG +P
Sbjct: 112 AMQAAGQIP-ATALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPF 161
Query: 256 TANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI 315
E+S+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGI
Sbjct: 162 GITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGI 220
Query: 316 IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPY 375
IF+G +K+RRP DY P + PS P + V P SA ++F+GGLP
Sbjct: 221 IFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPN 271
Query: 376 YFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDK 435
Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A LNG+++GDK
Sbjct: 272 YLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDK 331
Query: 436 TLTVRRANQG---ANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADEL 492
L V+RA+ G A Q V L Q L + Q G +P++V+CL +V+ +EL
Sbjct: 332 KLLVQRASVGSKNATLTSINQTPVTL---QVPGLNSSVTQMGGLPTEVLCLMNMVAPEEL 388
Query: 493 KDDEEYEEILEDMRQEGGKFA 513
DDEEYEEI+ED+R+E GK+
Sbjct: 389 LDDEEYEEIVEDVREECGKYG 409
>gi|328721668|ref|XP_003247369.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Acyrthosiphon pisum]
Length = 451
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 223/419 (53%), Gaps = 48/419 (11%)
Query: 108 DRHRERSR-ERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSR 166
D+ RER R ER ER K+RD + R R R R R + RSR +S +
Sbjct: 4 DKERERDRGERGERDKERDKERGERRRRSRSRDRERHRRHRSRSREGRKRSRSKS---PK 60
Query: 167 SRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQ 224
++SR R S +D+ PP +A A AAGQIP N P
Sbjct: 61 NKSRRRKPSLY---WDVPPPGFEHIAPLQYKAMQAAGQIPA----------NTMP----- 102
Query: 225 QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 284
P V + TR ARR+YVG +P E + FF+Q M + G G+ V
Sbjct: 103 ---DTPQTAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQMH-LSGLAQAAGNPV 158
Query: 285 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 344
+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY P T G ++ N
Sbjct: 159 LACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQP----TPGMTESN 214
Query: 345 PNLNLAAVGLTP------GSAGGL----EGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 394
P N + G+T S+ GL + P +IF+GGLP Y + Q++ELL SFG L+
Sbjct: 215 PVTNYNS-GMTLDMMKYDSSSFGLGTVPDSPHKIFIGGLPAYLNDEQVKELLTSFGQLKA 273
Query: 395 FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 454
F+LVKD TG SKGYAFC Y D+ +TD A A LNG+++G+K L V+RA+ GA P Q
Sbjct: 274 FNLVKDAATGLSKGYAFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASIGAKNPGLGQV 333
Query: 455 SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
V + + P++V+CL +V+ DELKD+EEYE+ILED+R+E K+
Sbjct: 334 PVTIQVPGLTVVGT-----AGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYG 387
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 173/276 (62%), Gaps = 17/276 (6%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
TR ARR+YVG +P E + FF+ M NTA PG+ V+ IN E+ FAF+E+R
Sbjct: 2 TRQARRLYVGNIPFGVTENLMIEFFNAKMKEAKLNTA-PGNPVIAAQINTEQNFAFIELR 60
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
SVEE + AMA DGII +G +K+RRP DY QP P ++ A PG
Sbjct: 61 SVEETTQAMAFDGIILQGQALKIRRPKDY-----------QPIPGMSENASVHVPGVVST 109
Query: 362 L--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+ + P +IF+GGLP Y E Q++ELL SFG LR F+LVKD TG SKGYAFC Y DL +
Sbjct: 110 VVPDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGI 169
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV-LLHAQQQI-ALQRLMLQPGSV- 476
TD+A LNG+++GDK L V+RA+ GA Q +++ ++ AQ QI L M PG+V
Sbjct: 170 TDVAIQGLNGMQLGDKKLIVQRASVGAKQNLNNPQAMNMVPAQLQIPGLDISMAVPGAVA 229
Query: 477 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++V+ L +V+ DEL DDEE+EEI +D+R+E K+
Sbjct: 230 ATEVLALMNMVTPDELGDDEEFEEIYDDVREECSKY 265
>gi|410351437|gb|JAA42322.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 237/427 (55%), Gaps = 28/427 (6%)
Query: 97 EKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSR 156
E +R+ + + ++R +E + + R D RSR DRR R +RRS+
Sbjct: 6 EFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSPDRRNRDQRSASRDRRRRSKPL 65
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLV 345
Query: 452 EQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 346 SPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDE 405
Query: 509 GGKFAFC 515
K+
Sbjct: 406 CSKYGLV 412
>gi|344277364|ref|XP_003410472.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Loxodonta
africana]
Length = 471
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 229/428 (53%), Gaps = 32/428 (7%)
Query: 95 DREKDREKDRHHRD---RHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKR 151
D ++ +K +H R+ RHR+RS S R+ D RS+ DRR R+ +R
Sbjct: 6 DFQRQLKKSKHGREEENRHRKRSHSHS-----RNRDRKRRSQSRDRRNHDQRNDPRDQRR 60
Query: 152 RSQSRSRGRSEHRSRSRSRSRSKSKRISG--FDMAPPASAMLAAGAGAA--AAGQIPGAN 207
RS+ SR E R +R KR +D+ PP + A AAGQIP A
Sbjct: 61 RSKPWSRDAEEERGGLIPSARHDRKRKVHKYWDVPPPGFEHITPMQYKAMQAAGQIP-AT 119
Query: 208 PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS 267
+P M P+ ++ PV Q TR ARR+YVG +P E+++ FF+
Sbjct: 120 AFLPTMTPDGLAMIP---------TPVPMGGSQMTRKARRLYVGNIPFGITEEAMMDFFN 170
Query: 268 QVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRP 327
+ +G T PG+ ++ V IN +K FAF+E RSV+E + A ALDGIIF+G +K+RRP
Sbjct: 171 -IQMRLGVLTQAPGNPILAVQINQDKNFAFLEFRSVDETTQATALDGIIFQGQSLKIRRP 229
Query: 328 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 387
DY P P+ + NL+A S + ++F+ GLP Y + Q++ELL
Sbjct: 230 HDYQP---------LPSMSENLSAYMAGVASTVVPDSDHKLFIEGLPTYLNDDQVKELLT 280
Query: 388 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN 447
SFGPL+ F LVKD TG SKGYA C Y D++ TD A A LNG+++GDK L V R + GA
Sbjct: 281 SFGPLKAFSLVKDSATGLSKGYAVCEYVDINDTDQATAGLNGMQLGDKKLLVLRGSVGAK 340
Query: 448 QPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
+ + Q L+ +Q G P++V+CL +V +EL DDEEYEEI+ED+R+
Sbjct: 341 NGTLSTINQVPVTPQVPGLRSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIMEDVRE 400
Query: 508 EGGKFAFC 515
E K+
Sbjct: 401 ECSKYGLV 408
>gi|60279268|ref|NP_001012496.1| splicing factor U2AF 65 kDa subunit isoform b [Homo sapiens]
gi|164565377|ref|NP_598432.2| splicing factor U2AF 65 kDa subunit isoform 2 [Mus musculus]
gi|109461136|ref|XP_001060115.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 6 [Rattus
norvegicus]
gi|338709958|ref|XP_001496159.3| PREDICTED: splicing factor U2AF 65 kDa subunit [Equus caballus]
gi|348551787|ref|XP_003461710.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 1 [Cavia
porcellus]
gi|359318549|ref|XP_003638845.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Canis lupus
familiaris]
gi|395861318|ref|XP_003802936.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Otolemur garnettii]
gi|397471087|ref|XP_003807136.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pan paniscus]
gi|403308602|ref|XP_003944746.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Saimiri boliviensis
boliviensis]
gi|14250571|gb|AAH08740.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|27695339|gb|AAH43071.1| U2af2 protein [Mus musculus]
gi|39644972|gb|AAH30574.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|119592810|gb|EAW72404.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_c [Homo
sapiens]
gi|148699339|gb|EDL31286.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_a [Mus musculus]
gi|149016700|gb|EDL75886.1| similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b
[Rattus norvegicus]
gi|261858294|dbj|BAI45669.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|325463253|gb|ADZ15397.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|380783067|gb|AFE63409.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
gi|389618965|gb|AFK92990.1| U2 small nuclear RNA auxiliary factor 2 [Sus scrofa]
gi|410212802|gb|JAA03620.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260572|gb|JAA18252.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291502|gb|JAA24351.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|431902970|gb|ELK09152.1| Splicing factor U2AF 65 kDa subunit [Pteropus alecto]
Length = 471
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 206/363 (56%), Gaps = 24/363 (6%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 345
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 346 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 405
Query: 513 AFC 515
Sbjct: 406 GLV 408
>gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus]
Length = 492
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 210/367 (57%), Gaps = 28/367 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 83 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 141
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 142 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 191
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 192 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 251
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 252 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 302
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 303 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLV 362
Query: 452 EQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 363 SLPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDE 422
Query: 509 GGKFAFC 515
K+
Sbjct: 423 CSKYGLV 429
>gi|328721670|ref|XP_001951521.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 416
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 198/354 (55%), Gaps = 37/354 (10%)
Query: 164 RSRSRS-RSRSKSKRISGF-DMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFP 219
RSRS+S +++S+ ++ S + D+ PP +A A AAGQIP N P
Sbjct: 32 RSRSKSPKNKSRRRKPSLYWDVPPPGFEHIAPLQYKAMQAAGQIPA----------NTMP 81
Query: 220 LVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG 279
P V + TR ARR+YVG +P E + FF+Q M + G
Sbjct: 82 --------DTPQTAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQMH-LSGLAQA 132
Query: 280 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 339
G+ V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY P T G
Sbjct: 133 AGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQP----TPG 188
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
++ NP N + G + P +IF+GGLP Y + Q++ELL SFG L+ F+LVK
Sbjct: 189 MTESNPVTNYNS-----GMTLDMNSPHKIFIGGLPAYLNDEQVKELLTSFGQLKAFNLVK 243
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D TG SKGYAFC Y D+ +TD A A LNG+++G+K L V+RA+ GA P Q V +
Sbjct: 244 DAATGLSKGYAFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASIGAKNPGLGQVPVTIQ 303
Query: 460 AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ P++V+CL +V+ DELKD+EEYE+ILED+R+E K+
Sbjct: 304 VPGLTVVGT-----AGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYG 352
>gi|344270173|ref|XP_003406920.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa
subunit-like [Loxodonta africana]
Length = 471
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 206/363 (56%), Gaps = 24/363 (6%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGLKREHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 345
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 346 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 405
Query: 513 AFC 515
Sbjct: 406 GLV 408
>gi|297302956|ref|XP_001119590.2| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial
[Macaca mulatta]
Length = 432
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 206/363 (56%), Gaps = 24/363 (6%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 345
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 346 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 405
Query: 513 AFC 515
Sbjct: 406 GLV 408
>gi|6005926|ref|NP_009210.1| splicing factor U2AF 65 kDa subunit isoform a [Homo sapiens]
gi|267188|sp|P26368.4|U2AF2_HUMAN RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=hU2AF(65);
Short=hU2AF65; AltName: Full=U2 snRNP auxiliary factor
large subunit
gi|37545|emb|CAA45409.1| splicing factor U2AF [Homo sapiens]
gi|380783065|gb|AFE63408.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
gi|410212804|gb|JAA03621.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260574|gb|JAA18253.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291504|gb|JAA24352.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 210/367 (57%), Gaps = 28/367 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLV 345
Query: 452 EQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 346 SPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDE 405
Query: 509 GGKFAFC 515
K+
Sbjct: 406 CSKYGLV 412
>gi|327365322|ref|NP_001192160.1| splicing factor U2AF 65 kDa subunit isoform 1 [Mus musculus]
gi|348551789|ref|XP_003461711.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 2 [Cavia
porcellus]
gi|392343893|ref|XP_003748811.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Rattus norvegicus]
gi|136628|sp|P26369.3|U2AF2_MOUSE RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|55101|emb|CAA45874.1| splicing factor U2AF [Mus musculus]
gi|26347321|dbj|BAC37309.1| unnamed protein product [Mus musculus]
Length = 475
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 210/367 (57%), Gaps = 28/367 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLV 345
Query: 452 EQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 346 SLPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDE 405
Query: 509 GGKFAFC 515
K+
Sbjct: 406 CSKYGLV 412
>gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large
Length = 475
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 210/367 (57%), Gaps = 28/367 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPLHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLV 345
Query: 452 EQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 346 SPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDE 405
Query: 509 GGKFAFC 515
K+
Sbjct: 406 CSKYGLV 412
>gi|301782083|ref|XP_002926459.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 496
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 206/362 (56%), Gaps = 24/362 (6%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 91 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 149
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 150 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 199
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 200 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 259
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 260 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 310
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 311 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 370
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 371 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 430
Query: 513 AF 514
Sbjct: 431 GL 432
>gi|297277970|ref|XP_001091568.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Macaca mulatta]
Length = 471
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 212/370 (57%), Gaps = 28/370 (7%)
Query: 153 SQSRSRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANP 208
S+ +RG + EH RS K K++ +D+ PP + A AAGQIP A
Sbjct: 58 SKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATA 116
Query: 209 AIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ 268
+P M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+
Sbjct: 117 LLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNA 167
Query: 269 VMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPS 328
M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP
Sbjct: 168 QMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPH 226
Query: 329 DYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLES 388
DY P + PS P + V P SA ++F+GGLP Y + Q++ELL S
Sbjct: 227 DYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTS 277
Query: 389 FGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-N 447
FGPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 278 FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKN 337
Query: 448 QPKPEQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILED 504
S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+ED
Sbjct: 338 ATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVED 397
Query: 505 MRQEGGKFAF 514
+R E K+
Sbjct: 398 VRDECSKYGL 407
>gi|348526424|ref|XP_003450719.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 475
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 214/377 (56%), Gaps = 31/377 (8%)
Query: 145 REDRHKRRSQSRSR--GRSEHRSRSRSRSRSKSKRISGF-DMAPPASAMLAAGAGAA--A 199
+E RH+RRS S+ RS R K K++ + D+ PP + A A
Sbjct: 57 KERRHRRRSVPVCNYIWASKQSKLLRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQA 116
Query: 200 AGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 259
AGQIP A +P M P+ A+ PV + Q TR ARR+YVG +P E
Sbjct: 117 AGQIP-ATALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITE 166
Query: 260 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 319
+S+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G
Sbjct: 167 ESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQG 225
Query: 320 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 379
+K+RRP DY P + PS P + V P SA ++F+GGLP Y +
Sbjct: 226 QSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLND 276
Query: 380 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A LNG+++GDK L V
Sbjct: 277 DQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLV 336
Query: 440 RRANQG---ANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDE 496
+RA+ G A Q V L Q L + Q G +P++V+CL +V+ +EL DDE
Sbjct: 337 QRASVGSKNATLSSINQTPVTL---QVPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDE 393
Query: 497 EYEEILEDMRQEGGKFA 513
EYEEI+ED+R E K+
Sbjct: 394 EYEEIVEDVRDECSKYG 410
>gi|114052735|ref|NP_001040494.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Bombyx mori]
gi|95103122|gb|ABF51502.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Bombyx mori]
Length = 417
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 197/347 (56%), Gaps = 36/347 (10%)
Query: 168 RSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQ 225
RSR R S +D+ PP + A AAGQIP AN +V
Sbjct: 40 RSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVADTP 83
Query: 226 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
A+PV+ TR ARR+YVG +P E+ FF+Q M + G G+ V+
Sbjct: 84 QAAVPVV-----GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMH-LSGLAQAAGNPVL 137
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY P P NP
Sbjct: 138 ACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGTENP 191
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
+N+ A G+ S + P +IF+GGLP Y E Q++ELL SFG LR F+LVKD TG
Sbjct: 192 AINVPA-GVI--STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGL 248
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
SKGYAF Y D+S+TD A A LNG+++GDK L V+RA+ GA K ++ A QI
Sbjct: 249 SKGYAFAEYVDISMTDQAIAGLNGMQLGDKKLIVQRASIGA---KNSTLALTGAAPVQIQ 305
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ L L P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 306 VAGLTLAGAGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKY 352
>gi|193629757|ref|XP_001950852.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Acyrthosiphon
pisum]
Length = 446
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 204/364 (56%), Gaps = 43/364 (11%)
Query: 164 RSRSRS-RSRSKSKRISGF-DMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFP 219
RSRS+S +++S+ ++ S + D+ PP +A A AAGQIP N P
Sbjct: 48 RSRSKSPKNKSRRRKPSLYWDVPPPGFEHIAPLQYKAMQAAGQIPA----------NTMP 97
Query: 220 LVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG 279
P V + TR ARR+YVG +P E + FF+Q M + G
Sbjct: 98 --------DTPQTAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQMH-LSGLAQA 148
Query: 280 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 339
G+ V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY P T G
Sbjct: 149 AGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQP----TPG 204
Query: 340 PSQPNPNLNLAAVGLTP------GSAGGL----EGPDRIFVGGLPYYFTEAQIRELLESF 389
++ NP N + G+T S+ GL + P +IF+GGLP Y + Q++ELL SF
Sbjct: 205 MTESNPVTNYNS-GMTLDMMKYDSSSFGLGTVPDSPHKIFIGGLPAYLNDEQVKELLTSF 263
Query: 390 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQP 449
G L+ F+LVKD TG SKGYAFC Y D+ +TD A A LNG+++G+K L V+RA+ GA P
Sbjct: 264 GQLKAFNLVKDAATGLSKGYAFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASIGAKNP 323
Query: 450 KPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
Q V + + P++V+CL +V+ DELKD+EEYE+ILED+R+E
Sbjct: 324 GLGQAPVTIQVPGLTVVGT-----AGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREEC 378
Query: 510 GKFA 513
K+
Sbjct: 379 NKYG 382
>gi|355703931|gb|EHH30422.1| hypothetical protein EGK_11092, partial [Macaca mulatta]
Length = 453
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 213/372 (57%), Gaps = 28/372 (7%)
Query: 151 RRSQSRSRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGA 206
++ + +RG + EH RS K K++ +D+ PP + A AAGQIP A
Sbjct: 47 KQYKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-A 105
Query: 207 NPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFF 266
+P M P+ A+ PV + Q TR ARR+YVG +P E+++ FF
Sbjct: 106 TALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFF 156
Query: 267 SQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRR 326
+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RR
Sbjct: 157 NAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRR 215
Query: 327 PSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELL 386
P DY P + PS P + V P SA ++F+GGLP Y + Q++ELL
Sbjct: 216 PHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELL 266
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 267 TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 326
Query: 447 -NQPKPEQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEIL 502
N S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+
Sbjct: 327 KNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIV 386
Query: 503 EDMRQEGGKFAF 514
ED+R E K+
Sbjct: 387 EDVRDECSKYGL 398
>gi|410903109|ref|XP_003965036.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 4
[Takifugu rubripes]
Length = 455
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 177/293 (60%), Gaps = 31/293 (10%)
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
V + Q TR ARR+YVG +P E+S+A FF+ M + G + P + V+ V IN +K
Sbjct: 115 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 173
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
FAF+E RSV+E + AMA DGIIF+G +K+RRP DY +P P ++ V
Sbjct: 174 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY-----------RPLPGISEQPVF 222
Query: 354 LTPGSAGGL--EGPDRIFVGGLPYYFTEAQI---------RELLESFGPLRGFDLVKDRE 402
PG + + P ++F+GGLP Y + Q+ +ELL SFGPL+ F+LVKD
Sbjct: 223 HVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVLIRRLGWRVKELLTSFGPLKAFNLVKDSA 282
Query: 403 TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA-- 460
T SKGYAFC Y D+S TD A A LNG+++GDK L V+RA+ GA P S ++ A
Sbjct: 283 TSLSKGYAFCEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVGAKNANP---SAIIEAPV 339
Query: 461 -QQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
Q LQR LQ +P++V+CL +V +EL DD++YEEILED+R+E K+
Sbjct: 340 TLQVPGLQR--LQNSGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKY 390
>gi|351710523|gb|EHB13442.1| Splicing factor U2AF 65 kDa subunit [Heterocephalus glaber]
Length = 904
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 201/357 (56%), Gaps = 22/357 (6%)
Query: 160 RSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNM 217
R+ +S R K K +D+ PP + A AAGQIP A +P M P+
Sbjct: 144 RTAAQSCRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPTMTPDG 202
Query: 218 FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT 277
A+ PV + Q TR ARR+YVG +P E+++ FF+ M +GG T
Sbjct: 203 L---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLT 252
Query: 278 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT 337
PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P +
Sbjct: 253 QAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMS 312
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL+ F+L
Sbjct: 313 ENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNL 363
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA +
Sbjct: 364 VKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQT 423
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 424 PVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGL 480
>gi|197692223|dbj|BAG70075.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
gi|197692475|dbj|BAG70201.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
Length = 471
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/366 (41%), Positives = 206/366 (56%), Gaps = 30/366 (8%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY-- 232
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPD---RIFVGGLPYYFTEAQIRELLESF 389
QP P ++ PG + PD ++F+GGLP Y + Q++ELL SF
Sbjct: 233 ---------QPLPGMSENLSVYVPGVVSTVV-PDSAHKLFIGGLPNYLNDDQVKELLTSF 282
Query: 390 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQP 449
GPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 283 GPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA 342
Query: 450 KPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E
Sbjct: 343 TLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDEC 402
Query: 510 GKFAFC 515
K+
Sbjct: 403 SKYGLV 408
>gi|63101571|gb|AAH94451.1| U2af2 protein, partial [Mus musculus]
Length = 403
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 203/358 (56%), Gaps = 23/358 (6%)
Query: 160 RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPN 216
+ EH RS K K++ +D+ PP + A AAGQIP A +P M P+
Sbjct: 2 KEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPTMTPD 60
Query: 217 MFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN 276
A+ PV + Q TR ARR+YVG +P E+++ FF+ M +GG
Sbjct: 61 GL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGL 110
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA 336
T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 111 TQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM 170
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL+ F+
Sbjct: 171 SENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPLKAFN 221
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA +
Sbjct: 222 LVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQ 281
Query: 457 LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 282 TPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGL 339
>gi|303283510|ref|XP_003061046.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457397|gb|EEH54696.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 378
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 177/301 (58%), Gaps = 17/301 (5%)
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVY 288
L + + QATRHARRVYVG L ++ + FF ++M A G G VV+ Y
Sbjct: 8 LTALHANGINVQATRHARRVYVGALTADVDDAHLTQFFEEIMLATGATKRVDGGCVVSTY 67
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN 348
IN EK FAF+E ++VEEASNA+ DG+++ G +++RRP+DYN + A+ LGP QPNPNLN
Sbjct: 68 INREKLFAFIEFQTVEEASNALGFDGVVYGGQQLRLRRPNDYNIAQASLLGPQQPNPNLN 127
Query: 349 LAAVGL--TP----GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRE 402
+A+G+ TP S P ++FVGGLP Y TE Q++EL+ SFG ++ F+LV D++
Sbjct: 128 YSAIGINHTPTPMVASTENSTSPYKLFVGGLPNYITENQVKELVCSFGEIKAFNLVFDKD 187
Query: 403 TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ-----GANQPKPEQESVL 457
TG SKGYAF + D SV++ A L+G+++G+K + V+ AN G E +
Sbjct: 188 TGLSKGYAFWEFLDPSVSEAAIKGLDGMRLGEKLINVKFANGNPPPIGGYNAAGEDGTST 247
Query: 458 LHAQQQIA------LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
+ AQQQ+ L G V + V L +VS +EL D E EILED +E
Sbjct: 248 VAAQQQLGYVANVPLATATALTGGVETTCVRLKGMVSREELADPTEAAEILEDTEEECKG 307
Query: 512 F 512
F
Sbjct: 308 F 308
>gi|348526426|ref|XP_003450720.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 487
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 218/389 (56%), Gaps = 43/389 (11%)
Query: 145 REDRHKRRS-----------QSRSRGRSE---HRSRSRSRSRSKSKRISGF-DMAPPASA 189
+E RH+RRS QS+ R E + RS R K K++ + D+ PP
Sbjct: 57 KERRHRRRSVPVCNYIWASKQSKLLLRQESPHYTGMYRSPHREKKKKVKKYWDVPPPGFE 116
Query: 190 MLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARR 247
+ A AAGQIP A +P M P+ A+ PV + Q TR ARR
Sbjct: 117 HITPMQYKAMQAAGQIP-ATALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARR 166
Query: 248 VYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEAS 307
+YVG +P E+S+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E +
Sbjct: 167 LYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETT 225
Query: 308 NAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDR 367
AMA DGIIF+G +K+RRP DY P + PS P + V P SA +
Sbjct: 226 QAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HK 276
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A L
Sbjct: 277 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGL 336
Query: 428 NGIKMGDKTLTVRRANQG---ANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLT 484
NG+++GDK L V+RA+ G A Q V L Q L + Q G +P++V+CL
Sbjct: 337 NGMQLGDKKLLVQRASVGSKNATLSSINQTPVTL---QVPGLNSSVTQMGGLPTEVLCLM 393
Query: 485 QVVSADELKDDEEYEEILEDMRQEGGKFA 513
+V+ +EL DDEEYEEI+ED+R E K+
Sbjct: 394 NMVAPEELLDDEEYEEIVEDVRDECSKYG 422
>gi|355756173|gb|EHH59920.1| hypothetical protein EGM_10153, partial [Macaca fascicularis]
Length = 442
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 213/373 (57%), Gaps = 28/373 (7%)
Query: 151 RRSQSRSRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGA 206
++ + +RG + EH RS K K++ +D+ PP + A AAGQIP A
Sbjct: 47 KQYKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-A 105
Query: 207 NPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFF 266
+P M P+ A+ PV + Q TR ARR+YVG +P E+++ FF
Sbjct: 106 TALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFF 156
Query: 267 SQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRR 326
+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RR
Sbjct: 157 NAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRR 215
Query: 327 PSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELL 386
P DY P + PS P + V P SA ++F+GGLP Y + Q++ELL
Sbjct: 216 PHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELL 266
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 267 TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 326
Query: 447 -NQPKPEQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEIL 502
N S + + + LM +Q G P++V+CL +V +EL DDEEYEEI+
Sbjct: 327 KNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIV 386
Query: 503 EDMRQEGGKFAFC 515
ED+R E K+
Sbjct: 387 EDVRDECSKYGLV 399
>gi|417410850|gb|JAA51891.1| Putative splicing factor u2af large subunit rrm superfamily,
partial [Desmodus rotundus]
Length = 455
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 205/362 (56%), Gaps = 24/362 (6%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH R K K++ +D+ PP + A AAGQIP A +P
Sbjct: 50 TRGAKEEHGGLIRPPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 108
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 109 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 158
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 159 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 218
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 219 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 269
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 270 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 329
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 330 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 389
Query: 513 AF 514
Sbjct: 390 GL 391
>gi|410982179|ref|XP_003997437.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Felis catus]
Length = 471
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 202/363 (55%), Gaps = 24/363 (6%)
Query: 157 SRGRSEHRS--RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG E S R K K +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLISLPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 345
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 346 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 405
Query: 513 AFC 515
Sbjct: 406 GLV 408
>gi|395331854|gb|EJF64234.1| hypothetical protein DICSQDRAFT_144911 [Dichomitus squalens
LYAD-421 SS1]
Length = 587
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 211/391 (53%), Gaps = 47/391 (12%)
Query: 142 DRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR---ISGFDMAPPA----SAMLAAG 194
D +R DR R G E RS + + S+R SG+D+ P +AM A
Sbjct: 125 DDERGDRRGRGKHREGLGTPERRSPTPPDAAPLSQRKRKASGWDVHAPGYEQYTAMQAKQ 184
Query: 195 AGAAAAGQIPGAN-------PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARR 247
G +PGAN AIPG+ P M G G P + +R +RR
Sbjct: 185 TGLF---NLPGANRTQIPPILAIPGLPPPMPVSTFGMGTGVNPNL---------SRQSRR 232
Query: 248 VYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEAS 307
+Y+G + P NEQ++ FF+ M + T PG+ V+ V N+EK +AFVE RS E+A+
Sbjct: 233 LYIGSITPDINEQNLTDFFNSKMKEMNLGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDAT 292
Query: 308 NAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT--PGSAGGLEGP 365
AMA DGIIF P+K+RRP DY GP PN+++ V T P SA
Sbjct: 293 AAMAFDGIIFLNGPLKIRRPKDYG-------GPDVIAPNMHVPGVVSTNVPDSA------ 339
Query: 366 DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 425
++IFVGGLP Y E Q+ ELL SFG L+ F+LV++ G SKG+AF Y D SVTD+A
Sbjct: 340 NKIFVGGLPTYLNEEQVMELLSSFGELKAFNLVRENGNGPSKGFAFFEYVDPSVTDVAIQ 399
Query: 426 ALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS---KVVC 482
+L+G+++GDK L V+RA+ GA KP Q + + + +L G + +++
Sbjct: 400 SLSGMELGDKYLVVQRASVGA---KPGQSPIPGMYDLNPEIPKPILPVGDLSESQDRILL 456
Query: 483 LTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ +V +EL+DD+EY +ILED+++E GK+
Sbjct: 457 MLNMVVPEELQDDQEYADILEDVKEECGKYG 487
>gi|444724150|gb|ELW64768.1| Splicing factor U2AF 65 kDa subunit [Tupaia chinensis]
Length = 447
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 197/347 (56%), Gaps = 22/347 (6%)
Query: 170 RSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFG 227
R K K +D+ PP + A AAGQIP A +P M P+
Sbjct: 57 RHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPTMTPDGL--------- 106
Query: 228 ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV 287
A+ PV + Q TR ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V
Sbjct: 107 AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAV 165
Query: 288 YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL 347
IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P + PS P +
Sbjct: 166 QINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGV 225
Query: 348 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
V P SA ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SK
Sbjct: 226 VSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 276
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
GYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA + Q L
Sbjct: 277 GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLM 336
Query: 468 RLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
+Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 337 SSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGL 383
>gi|432908695|ref|XP_004077988.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oryzias latipes]
Length = 458
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 171/430 (39%), Positives = 232/430 (53%), Gaps = 42/430 (9%)
Query: 87 DMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
D D + + E +E+D+ +R R SR RS RK R D R R +E
Sbjct: 3 DFDEFERQLSENHQERDKENRHHRRSSSRSRSRERKKRSRDGGERR----SRDRRGDSKE 58
Query: 147 DRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGA 206
RH+R RS HR + + + GF+ P AAGQIP A
Sbjct: 59 RRHRRN-------RSPHREKKKKIKKYWDVPPPGFEHITPMQY-----KAMQAAGQIP-A 105
Query: 207 NPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFF 266
+P M P+ A+ PV + Q TR ARR+YVG +P E+S+ FF
Sbjct: 106 TALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFF 156
Query: 267 SQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRR 326
+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RR
Sbjct: 157 NAQM-RLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRR 215
Query: 327 PSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELL 386
P DY P + PS P + V P SA ++F+GGLP Y + Q++ELL
Sbjct: 216 PHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELL 266
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG- 445
SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A LNG+++GDK L V+RA+ G
Sbjct: 267 TSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS 326
Query: 446 --ANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILE 503
A Q V L Q L + Q G +P++V+CL +V+ +EL DDEEYEEI+E
Sbjct: 327 KNATLTSINQTPVTL---QVPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVE 383
Query: 504 DMRQEGGKFA 513
D+R+E GK+
Sbjct: 384 DVREECGKYG 393
>gi|327280715|ref|XP_003225097.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 456
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 194/335 (57%), Gaps = 22/335 (6%)
Query: 181 FDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+D+ PP + A AAGQIP A +P M P+ A+ PV +
Sbjct: 77 WDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPTMTPDGL---------AVTPTPVPVVG 126
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q TR ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN +K FAF+
Sbjct: 127 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFL 185
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
E RSV+E + AMA DGIIF+G +K+RRP DY P + PS P + V P S
Sbjct: 186 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDS 242
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
A ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++
Sbjct: 243 A------HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDIN 296
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
VTD A A LNG+++GDK L V+RA+ GA + Q L +Q G P+
Sbjct: 297 VTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPT 356
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 357 EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYG 391
>gi|71480064|ref|NP_001025127.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
gi|68533572|gb|AAH98548.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
Length = 465
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 198/341 (58%), Gaps = 33/341 (9%)
Query: 181 FDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+D+ PP + A AAGQIP + P +T + P PV +
Sbjct: 85 WDVPPPGFEHITPMQYKAMQAAGQIPATA---------LLPTMTPEGLAVTPT-PVPVVG 134
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q TR ARR+YVG +P E+S+ FF+ M +GG T PG+ V+ V IN +K FAF+
Sbjct: 135 SQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFL 193
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
E RSV+E + AMA DGIIF+G +K+RRP DY P + PS P + V P S
Sbjct: 194 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDS 250
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
A ++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++
Sbjct: 251 A------HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVN 304
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLML------Q 472
++D A A LNG+++GDK L V+RA+ G+ + ++ Q + LQ L Q
Sbjct: 305 ISDQAIAGLNGMQLGDKKLLVQRASVGS-----KNTTLTGINQTPVTLQVPGLMNSSVNQ 359
Query: 473 PGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
G +P++V+CL +V+ +EL DDEEYEEI+ED+R E K+
Sbjct: 360 MGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYG 400
>gi|297837403|ref|XP_002886583.1| hypothetical protein ARALYDRAFT_338287 [Arabidopsis lyrata subsp.
lyrata]
gi|297332424|gb|EFH62842.1| hypothetical protein ARALYDRAFT_338287 [Arabidopsis lyrata subsp.
lyrata]
Length = 233
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/169 (71%), Positives = 140/169 (82%), Gaps = 7/169 (4%)
Query: 349 LAAVGL-TPGSAGG--LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
+ AV L T GS G +EGPDRIFVGGLP+YFT+AQIRE+LE GPLRGF+L+KDR+TG+
Sbjct: 1 MVAVELSTTGSTTGDLVEGPDRIFVGGLPHYFTDAQIREILECLGPLRGFNLLKDRQTGD 60
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV-LLHAQQQI 464
SKGYAFCVYQD SVTDIACAALNGIK+GDKTL VRRA QG QPKPEQE V AQQQI
Sbjct: 61 SKGYAFCVYQDPSVTDIACAALNGIKIGDKTLAVRRAMQGTIQPKPEQEEVLQQIAQQQI 120
Query: 465 ALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
ALQRLML+PG +P+K+VCL+Q+V+ D L++ EEY +I MRQEGGKF
Sbjct: 121 ALQRLMLEPGGIPTKIVCLSQLVTIDNLRNYEEYADI---MRQEGGKFG 166
>gi|390479436|ref|XP_002762565.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Callithrix jacchus]
Length = 453
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/317 (44%), Positives = 187/317 (58%), Gaps = 20/317 (6%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP A +P M P+ A+ PV + Q TR ARR+YVG +P
Sbjct: 97 AAGQIP-ATALLPTMTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGIT 146
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+++ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+
Sbjct: 147 EEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQ 205
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P + PS P + V P SA ++F+GGLP Y
Sbjct: 206 GQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLN 256
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
+ Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L
Sbjct: 257 DDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLL 316
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEY 498
V+RA+ GA + Q L +Q G P++V+CL +V +EL DDEEY
Sbjct: 317 VQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEY 376
Query: 499 EEILEDMRQEGGKFAFC 515
EEI+ED+R E K+
Sbjct: 377 EEIVEDVRDECSKYGLV 393
>gi|226478958|emb|CAX72974.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 520
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 219/432 (50%), Gaps = 70/432 (16%)
Query: 98 KDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRS 157
K RE+ R H HR S+ R RD HK R
Sbjct: 79 KKRERKRSHSHGHRRHSKSR------------------------HRDYSGGHKSR----- 109
Query: 158 RGRSEHRSRSRSRSRSKSKRIS--GFDMAPPAS--AMLAAG---AGAAAAGQIPGANPAI 210
R +S HRS S S S K + GF+ PA A+ +G AAGQ+P +
Sbjct: 110 RHQSHHRSPSNSVSAHKYWDVPPPGFEHVTPAQYKALQTSGQVPVNVYAAGQVP-----M 164
Query: 211 PGMFPNM-FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQV 269
P PN L T F V R ARR+YVG +P TA E+++ FF++
Sbjct: 165 PVHAPNAPLTLTTNVPFAGSAV----------CRQARRLYVGNIPFTATEENMMEFFNKQ 214
Query: 270 MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD 329
M A G A G+ ++ V IN EK FAF+E RSV+E + +ALDG++F+ +K+RRP D
Sbjct: 215 MRAQGLIQA-EGNPIIAVQINMEKNFAFLEFRSVDETTQGLALDGVLFQNQALKLRRPRD 273
Query: 330 YNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESF 389
Y P + PS P + V + P +IFVGGLP Y E Q++ELL SF
Sbjct: 274 YAPLPGVSEQPSVIVPGVVSTVVQ---------DSPHKIFVGGLPNYLNEDQVKELLLSF 324
Query: 390 GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQP 449
GPL+GF+LVKD TG SKGYAFC Y D +VTD ACA LNG+++GDK L V+RA+ GA
Sbjct: 325 GPLKGFNLVKDGSTGLSKGYAFCEYVDSNVTDHACAGLNGMQLGDKKLIVQRASVGAKHT 384
Query: 450 KPEQESVLLH--------AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEI 501
LL Q L ++ G P++V+CL ++ EL+DDEEYE+I
Sbjct: 385 TGVLPQCLLQMSGLEEGAVQNTTGSGNLTVRSGGPPTEVLCLMNMIETSELEDDEEYEDI 444
Query: 502 LEDMRQEGGKFA 513
+ED+R E K+
Sbjct: 445 VEDVRAECSKYG 456
>gi|384939342|gb|AFI33276.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
Length = 471
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 187/335 (55%), Gaps = 24/335 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 345
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVV 487
+ Q L +Q G P++V+CL +V
Sbjct: 346 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMV 380
>gi|348688506|gb|EGZ28320.1| hypothetical protein PHYSODRAFT_309221 [Phytophthora sojae]
Length = 694
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/287 (43%), Positives = 182/287 (63%), Gaps = 22/287 (7%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVM-AAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q TRHARR+YVGG+ +E + FF+ V+ A+G G +VV+VYIN E+ FAFV
Sbjct: 351 QQTRHARRLYVGGIGEI-SEPEITAFFNDVIDRALGEKQEG--GSVVSVYINRERHFAFV 407
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP-SLAATLGPSQPNPNLNLAAVGLTPG 357
E+R++E + M LDG+ + G P+K+RRP+DYNP ++ LGP P LNLAA+G+
Sbjct: 408 ELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPI---PQLNLAALGIVST 464
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
+ +GP +IF+GGLPY+ E Q++ELL++FGPLR F LVK+ + SKGY FC Y D+
Sbjct: 465 TVS--DGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDI 522
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH------------AQQQIA 465
+VTD AC LN +++GDKTLTVRRA N + ++ A Q ++
Sbjct: 523 NVTDAACLGLNDMRLGDKTLTVRRAMSQENAKAVASAAGTVNTGLEMGLDPSRAAMQAMS 582
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L + P PS+V+ L +V+ +EL+D+EEY +IL+D++ E +F
Sbjct: 583 LAGIPSLPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERF 629
>gi|301117646|ref|XP_002906551.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262107900|gb|EEY65952.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 569
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 182/287 (63%), Gaps = 22/287 (7%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVM-AAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q TRHARR+YVGG+ +E + FF+ V+ A+G G +VV+VYIN E+ FAFV
Sbjct: 226 QQTRHARRLYVGGIG-EISEPEITAFFNDVIDRALGEKQEG--GSVVSVYINRERHFAFV 282
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP-SLAATLGPSQPNPNLNLAAVGLTPG 357
E+RS+E + M LDG+ + G P+K+RRP+DYNP ++ LGP P LNLAA+G+
Sbjct: 283 ELRSIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPI---PQLNLAALGIVST 339
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
+ +GP +IF+GGLPY+ E Q++ELL++FGPLR F LVK+ + SKGY FC Y D+
Sbjct: 340 TVS--DGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDI 397
Query: 418 SVTDIACAALNGIKMGDKTLTVRRA---------NQGANQPKPEQESVL---LHAQQQIA 465
+VTD AC LN +++GDKTLTVRRA A E L L A Q ++
Sbjct: 398 NVTDAACIGLNDMQLGDKTLTVRRAMSQENAKAVASAAGTVNTGLEMGLDPSLAAMQAMS 457
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ + P PS+V+ L +V+ +EL+D+EEY +IL+D++ E +F
Sbjct: 458 MAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERF 504
>gi|270011684|gb|EFA08132.1| hypothetical protein TcasGA2_TC005736 [Tribolium castaneum]
Length = 432
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 198/352 (56%), Gaps = 43/352 (12%)
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTG 223
+S SR R S +D+ PP + A AAGQIP AN +V
Sbjct: 56 KSHSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVAD 99
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
A+PV+ TR ARR+YVG +P E+ + FF+Q M + G G+
Sbjct: 100 TPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNP 153
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY QP
Sbjct: 154 VLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QP 202
Query: 344 NPNLNLAAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDR 401
P + +++ + G + + P +IF+GGLP Y E Q++ELL SFG LR F+LVKD
Sbjct: 203 MPGMAESSISVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDT 262
Query: 402 ETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQ 461
G SKGYAF Y D+++TD A A LNG+++GDK L V+RA+ GA + +V+ Q
Sbjct: 263 AFGLSKGYAFAEYIDITMTDQAIAGLNGMQLGDKRLIVQRASVGA-----KNATVIPAVQ 317
Query: 462 QQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q+ L+ G P++V+CL +V+ DELKD+EEYE+ILED+++E K+
Sbjct: 318 IQVPGLSLVGASGP-PTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYG 368
>gi|332375140|gb|AEE62711.1| unknown [Dendroctonus ponderosae]
Length = 374
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 197/357 (55%), Gaps = 45/357 (12%)
Query: 163 HRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPL 220
H+ SR R S +D+ PP + A AAGQIP AN +
Sbjct: 56 HKGHSRRRKPSLY-----WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------I 97
Query: 221 VTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP 280
V A+PV+ TR ARR+YVG +P E + +F+Q M + G
Sbjct: 98 VADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEDEMMEYFNQQMH-LSGLAQAA 151
Query: 281 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGP 340
G+ V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY
Sbjct: 152 GNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY---------- 201
Query: 341 SQPNPNLNLAAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV 398
QP P ++ ++ + G + + P +IF+GGLP Y E Q++ELL SFG LR F+LV
Sbjct: 202 -QPMPGMSENSISVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLV 260
Query: 399 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 458
KD G SKGYAF Y D+S+TD A A LNG+++GDK L V+RA+ GA + +VL
Sbjct: 261 KDTAFGLSKGYAFAEYIDISMTDQAIAGLNGMQLGDKRLIVQRASVGA-----KNATVLP 315
Query: 459 HAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFC 515
Q Q+ L+ G P++V+CL +V+ DELKD+EEYE+ILED+++E K+
Sbjct: 316 AVQIQVPGLSLVGASGP-PTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVV 371
>gi|384939340|gb|AFI33275.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
Length = 475
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 191/339 (56%), Gaps = 28/339 (8%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA N
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLV 345
Query: 452 EQESVLLHAQQQIALQRLM---LQPGSVPSKVVCLTQVV 487
S + + + LM +Q G P++V+CL +V
Sbjct: 346 SPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMV 384
>gi|195167317|ref|XP_002024480.1| GL15893 [Drosophila persimilis]
gi|198469588|ref|XP_001355063.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
gi|194107878|gb|EDW29921.1| GL15893 [Drosophila persimilis]
gi|198146942|gb|EAL32119.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 172/286 (60%), Gaps = 14/286 (4%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 79 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 137
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 138 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGIT-----DTPAIKP 192
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 193 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY 252
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK---PEQESVLLHAQQQIAL 466
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + +SV+L Q+
Sbjct: 253 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNASNSSQSVML----QVPG 308
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++ G P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 309 LSTVVSSGP-PTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 353
>gi|91088649|ref|XP_974465.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor 2 [Tribolium castaneum]
Length = 450
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 198/352 (56%), Gaps = 43/352 (12%)
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTG 223
+S SR R S +D+ PP + A AAGQIP AN +V
Sbjct: 74 KSHSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVAD 117
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
A+PV+ TR ARR+YVG +P E+ + FF+Q M + G G+
Sbjct: 118 TPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNP 171
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY QP
Sbjct: 172 VLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QP 220
Query: 344 NPNLNLAAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDR 401
P + +++ + G + + P +IF+GGLP Y E Q++ELL SFG LR F+LVKD
Sbjct: 221 MPGMAESSISVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDT 280
Query: 402 ETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQ 461
G SKGYAF Y D+++TD A A LNG+++GDK L V+RA+ GA + +V+ Q
Sbjct: 281 AFGLSKGYAFAEYIDITMTDQAIAGLNGMQLGDKRLIVQRASVGA-----KNATVIPAVQ 335
Query: 462 QQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q+ L+ G P++V+CL +V+ DELKD+EEYE+ILED+++E K+
Sbjct: 336 IQVPGLSLVGASGP-PTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYG 386
>gi|159487587|ref|XP_001701804.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158281023|gb|EDP06779.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 309
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 162/248 (65%), Gaps = 7/248 (2%)
Query: 265 FFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 324
FF+Q+M A G T PG V++ ++N++K+FAF+EMR VEE SNAMA DGI +G +KV
Sbjct: 1 FFNQIMMASGATTQ-PGPPVMSCFMNNDKRFAFLEMRCVEETSNAMAFDGIQCQGEVLKV 59
Query: 325 RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRE 384
RRP DYNP+ A LGP+ P+P +NLA +G+ +GP+++++GGLP +E Q+R+
Sbjct: 60 RRPHDYNPAAAKLLGPTDPSPKVNLALLGVINTLVE--DGPNKVYIGGLPACLSEEQVRQ 117
Query: 385 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ 444
+L++FG L+ F+LV DRETGNSKGY FC Y D SVTD A L+ + + K LT RRAN
Sbjct: 118 ILQAFGTLKAFNLVLDRETGNSKGYGFCEYADPSVTDSAIQGLSALIIQGKPLTARRANT 177
Query: 445 GANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILED 504
A Q L QQQ AL P VV L+++VS D+L DD EY ++L+D
Sbjct: 178 SAETSLTLQT---LIEQQQAALVS-TTSPAGGGHTVVRLSKMVSRDDLLDDGEYADLLDD 233
Query: 505 MRQEGGKF 512
+ +E GK+
Sbjct: 234 ITEEVGKY 241
>gi|386764548|ref|NP_001245708.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
gi|383293438|gb|AFH07421.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
Length = 427
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 170/291 (58%), Gaps = 24/291 (8%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 88 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 146
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 147 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGIT-----DTPAIKP 201
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 202 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY 261
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + + Q +
Sbjct: 262 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTT----------QSV 311
Query: 470 MLQ-PG-------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
MLQ PG P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 312 MLQVPGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 362
>gi|347968827|ref|XP_311994.4| AGAP002908-PA [Anopheles gambiae str. PEST]
gi|333467820|gb|EAA08228.4| AGAP002908-PA [Anopheles gambiae str. PEST]
Length = 446
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 193/357 (54%), Gaps = 45/357 (12%)
Query: 162 EHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLV 221
+HRSR R S GF+ P AAGQIP AN +V
Sbjct: 64 KHRSRRRKPSLYWDVPPPGFEHITPLQY-----KAMQAAGQIP-AN------------IV 105
Query: 222 TGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 281
A+PV+ TR ARR+YVG +P E+ + FF+Q M + G G
Sbjct: 106 ADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAG 159
Query: 282 DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 341
+ V+ IN +K FAF+E RS++E + AMA D I F+G +K+RRP DY
Sbjct: 160 NPVLACQINLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDY----------- 208
Query: 342 QPNPNLNLAAVGLTPGSAGGL------EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGF 395
QP P + +A P G+ + P +IF+GGLP Y E Q++ELL SFG L+ F
Sbjct: 209 QPMPGMTDSAAVNVPEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAF 268
Query: 396 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 455
+LVKD TG KGYAF Y + +VTD A A LNG+++GDK L V+RA+ GA K +
Sbjct: 269 NLVKDAATGLGKGYAFAEYVEYTVTDQAIAGLNGMQLGDKKLIVQRASVGA---KNSNAA 325
Query: 456 VLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
V+ Q Q+ L+ G P++V+CL +V+ DELKD+EEYE+ILED+R+E K+
Sbjct: 326 VVAPVQIQVPGLSLVGSSGP-PTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKY 381
>gi|357623461|gb|EHJ74600.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Danaus
plexippus]
Length = 350
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 184/316 (58%), Gaps = 35/316 (11%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 3 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 44
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 45 EEETMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 103
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P P NP +N+ A G+ S + P +IF+GGLP Y
Sbjct: 104 GQSLKIRRPHDYQPM------PGTENPAINVPA-GVI--STVVPDSPHKIFIGGLPNYLN 154
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAF Y D+S+TD A A LNG+++GDK L
Sbjct: 155 EDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAGLNGMQLGDKKLI 214
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQR--LMLQPGSVPSKVVCLTQVVSADELKDDE 496
V+RA+ GA + ++ + + LQ L L ++V+CL +V+ DEL+D+E
Sbjct: 215 VQRASIGA-----KNSTLAMTGAAPVTLQVAGLTLAGAGPATEVLCLLNMVTPDELRDEE 269
Query: 497 EYEEILEDMRQEGGKF 512
EYE+ILED+++E K+
Sbjct: 270 EYEDILEDIKEECNKY 285
>gi|194770152|ref|XP_001967161.1| GF19596 [Drosophila ananassae]
gi|190619281|gb|EDV34805.1| GF19596 [Drosophila ananassae]
Length = 416
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 170/291 (58%), Gaps = 24/291 (8%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGIT-----DTPAIKP 190
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 191 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY 250
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + + Q +
Sbjct: 251 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNASNTT----------QSV 300
Query: 470 MLQ-PG-------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
MLQ PG P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 301 MLQVPGLSTVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
>gi|17136764|ref|NP_476891.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|386764552|ref|NP_001245710.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
gi|195351420|ref|XP_002042232.1| GM13406 [Drosophila sechellia]
gi|195479195|ref|XP_002100800.1| GE15975 [Drosophila yakuba]
gi|195555160|ref|XP_002077042.1| GD24494 [Drosophila simulans]
gi|4033485|sp|Q24562.1|U2AF2_DROME RecName: Full=Splicing factor U2AF 50 kDa subunit; AltName: Full=U2
auxiliary factor 50 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|349761|gb|AAA03548.1| RNA binding protein [Drosophila melanogaster]
gi|7293214|gb|AAF48596.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|17861976|gb|AAL39465.1| LD03714p [Drosophila melanogaster]
gi|194124075|gb|EDW46118.1| GM13406 [Drosophila sechellia]
gi|194188324|gb|EDX01908.1| GE15975 [Drosophila yakuba]
gi|194203060|gb|EDX16636.1| GD24494 [Drosophila simulans]
gi|220943258|gb|ACL84172.1| U2af50-PA [synthetic construct]
gi|220953438|gb|ACL89262.1| U2af50-PA [synthetic construct]
gi|383293440|gb|AFH07423.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
Length = 416
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 170/291 (58%), Gaps = 24/291 (8%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGIT-----DTPAIKP 190
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 191 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY 250
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + + Q +
Sbjct: 251 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTT----------QSV 300
Query: 470 MLQ-PG-------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
MLQ PG P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 301 MLQVPGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
>gi|194893848|ref|XP_001977952.1| GG19328 [Drosophila erecta]
gi|190649601|gb|EDV46879.1| GG19328 [Drosophila erecta]
Length = 416
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 170/291 (58%), Gaps = 24/291 (8%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGIT-----DTPAIKP 190
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 191 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY 250
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + + Q +
Sbjct: 251 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTT----------QSV 300
Query: 470 MLQ-PG-------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
MLQ PG P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 301 MLQVPGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
>gi|386764550|ref|NP_001245709.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
gi|383293439|gb|AFH07422.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
Length = 360
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 170/291 (58%), Gaps = 24/291 (8%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 21 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 79
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 80 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGIT-----DTPAIKP 134
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 135 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY 194
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + + Q +
Sbjct: 195 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTT----------QSV 244
Query: 470 MLQ-PG-------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
MLQ PG P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 245 MLQVPGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 295
>gi|195448282|ref|XP_002071589.1| GK10063 [Drosophila willistoni]
gi|194167674|gb|EDW82575.1| GK10063 [Drosophila willistoni]
Length = 416
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 172/286 (60%), Gaps = 14/286 (4%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGIT-----DTPAIKP 190
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 191 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY 250
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK---PEQESVLLHAQQQIAL 466
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + +SV+L Q+
Sbjct: 251 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVML----QVPG 306
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++ G P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 307 LSTVVTSGP-PTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
>gi|354486866|ref|XP_003505598.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Cricetulus
griseus]
gi|344242983|gb|EGV99086.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 469
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 199/362 (54%), Gaps = 28/362 (7%)
Query: 159 GRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPN 216
+ EH S K K +D+ PP + A AAGQIP
Sbjct: 68 AKEEHGGLISSPRHEKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPAT---------A 118
Query: 217 MFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN 276
+ P VT A P MPV + Q TR ARR+YVG +P E+++ FF+ M +G
Sbjct: 119 LLPTVTSDGLVASP-MPVPVVGSQMTRQARRLYVGNIPFGITEEAMKDFFNAQM-QLGVL 176
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA 336
T PG+ V+ V IN EK FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 177 TQVPGNPVLAVQINQEKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM 236
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
+ PS P + V P SA ++F+GG+P Y + +++ELL SFG L+ F+
Sbjct: 237 SENPSVYVPGVVSTVV---PDSA------HKLFIGGMPSYLNDDKVKELLTSFGTLKAFN 287
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LVKD TG SKGYAFC Y D++ TD A A LNG+++GDK L V+RA+ G+ K S
Sbjct: 288 LVKDSATGLSKGYAFCEYLDINATDQAIAGLNGMQLGDKKLIVQRASVGS---KNATLST 344
Query: 457 LLHAQQQIALQRLM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ + + LM +Q G P++V+CL +V EL DDEEYEEI+ED+R E K+
Sbjct: 345 INQTPVTVQVPGLMSSQVQMGGHPTEVLCLMNMVLPKELLDDEEYEEIVEDVRDECSKYG 404
Query: 514 FC 515
Sbjct: 405 LV 406
>gi|195042782|ref|XP_001991497.1| GH12033 [Drosophila grimshawi]
gi|195134983|ref|XP_002011915.1| GI14308 [Drosophila mojavensis]
gi|193901255|gb|EDW00122.1| GH12033 [Drosophila grimshawi]
gi|193909169|gb|EDW08036.1| GI14308 [Drosophila mojavensis]
Length = 416
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 172/286 (60%), Gaps = 14/286 (4%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P T P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQDLKIRRPHDYQPMPGIT-----DTPAVKP 190
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A V S + P +IF+GGLP Y + Q++ELL SFG LR F+LVKD TG SKGY
Sbjct: 191 AVVSSGVISTVVPDSPHKIFIGGLPNYLNDEQVKELLLSFGKLRAFNLVKDAATGLSKGY 250
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK---PEQESVLLHAQQQIAL 466
AFC Y DLS+TD + A LNG+++GDK L V+RA+ GA + +SV+L Q+
Sbjct: 251 AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTSQSVML----QVPG 306
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++ G P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 307 LSTVVTSGP-PTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
>gi|124360614|gb|ABN08613.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 257
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/243 (53%), Positives = 155/243 (63%), Gaps = 7/243 (2%)
Query: 79 DRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRR 138
D+ + D + R R+ DR+ HRDRHR+ E + R D + R RDYDR
Sbjct: 16 DKPSSRGSGHDSTRMRRRDGDRKSFHDHRDRHRDDKYEGFKGRGKYDSYNRQRGRDYDRH 75
Query: 139 KDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRS-KSKRISGFDMAPPASAMLAAGAGA 197
DYDRDR+ R++ + S+ R + KR SGFDMAPPA+ G
Sbjct: 76 NDYDRDRDTRNRYGAHSKRSRRESRSRSRSRSPSQSEGKRTSGFDMAPPAT-----GVTP 130
Query: 198 AAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTA 257
+GQ+PG I G N P Q GAL +M VQ MTQQATRHARRVYVGGLPP A
Sbjct: 131 TVSGQMPGIAHMIQGATQNFSPYGI-SQIGALSLMQVQPMTQQATRHARRVYVGGLPPFA 189
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
NEQS+A+FFSQVM AIGGN+AG GD+VVNVYINHEKKFAFVEMR+VEEASNAMALDGI+F
Sbjct: 190 NEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVEMRTVEEASNAMALDGIVF 249
Query: 318 EGA 320
E +
Sbjct: 250 EAS 252
>gi|327280717|ref|XP_003225098.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 467
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 194/346 (56%), Gaps = 33/346 (9%)
Query: 181 FDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+D+ PP + A AAGQIP A +P M P+ A+ PV +
Sbjct: 77 WDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPTMTPDGL---------AVTPTPVPVVG 126
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q TR ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN +K FAF+
Sbjct: 127 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFL 185
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
E RSV+E + AMA DGIIF+G +K+RRP DY P + PS P + V P S
Sbjct: 186 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDS 242
Query: 359 AGGLEGPDRIFVGGLPYY-----------FTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
A ++F+GGLP Y F Q++ELL SFGPL+ F+LVKD TG SK
Sbjct: 243 A------HKLFIGGLPNYLNDDQVMFLPPFLSCQVKELLTSFGPLKAFNLVKDSATGLSK 296
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
GYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA + Q L
Sbjct: 297 GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLM 356
Query: 468 RLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 357 SSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYG 402
>gi|389610875|dbj|BAM19048.1| U2 small nuclear riboprotein auxiliary factor 50 [Papilio polytes]
Length = 422
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 181/316 (57%), Gaps = 30/316 (9%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 70 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 111
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 112 EEETMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 170
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P P NP +N+ A G+ S + P +IF+GGLP Y
Sbjct: 171 GQSLKIRRPHDYQPM------PGTENPAINVPA-GVI--STVVPDSPHKIFIGGLPNYLN 221
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAF Y D+S+TD A A LNG+++GDK L
Sbjct: 222 EDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAGLNGMQLGDKKLI 281
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQR--LMLQPGSVPSKVVCLTQVVSADELKDDE 496
V+RA+ GA + + LQ L L ++V+CL +V+ DEL+D+E
Sbjct: 282 VQRASIGAKNSTLGVYIQSMTGAAPVTLQVAGLTLAGAGPATEVLCLLNMVTPDELRDEE 341
Query: 497 EYEEILEDMRQEGGKF 512
EYE+ILED+++E K+
Sbjct: 342 EYEDILEDIKEECNKY 357
>gi|119592808|gb|EAW72402.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_a [Homo
sapiens]
Length = 376
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 172/294 (58%), Gaps = 24/294 (8%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 339
>gi|390341852|ref|XP_792919.3| PREDICTED: splicing factor U2AF 50 kDa subunit-like
[Strongylocentrotus purpuratus]
Length = 386
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 178/286 (62%), Gaps = 34/286 (11%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 299
Q TR ARR+YVG +P E ++ FF+ M +G A PG V+ V +NH+K FAF+E
Sbjct: 57 QMTRQARRLYVGNIPFGVTEDAMVEFFNGKMHNVGLAQA-PGPPVLAVQVNHDKNFAFLE 115
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYN--PSLAATLGPSQPNPNLNLAAVGLTPG 357
RSVEE + AMA DGI+F+ +K+RRP DY P ++AT P +++ PG
Sbjct: 116 FRSVEETTQAMAFDGILFQNQALKIRRPKDYQAIPGMSAT-------PTVHV------PG 162
Query: 358 SAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
+ + P++IF+GGLP Y + Q++ELL SFGPL+ F+LVKD T SKGYAFC Y
Sbjct: 163 VVSTVVQDSPNKIFIGGLPNYLNDDQVKELLSSFGPLKAFNLVKDSATSLSKGYAFCEYV 222
Query: 416 DLSVTDI-------ACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQR 468
+ ++TD+ A A LNG+++G+K L V+RA+ GA + + V QI +
Sbjct: 223 ETNLTDLGWETTDKAIAGLNGMQLGEKKLIVQRASVGAKNAMNQGQQV------QINIPG 276
Query: 469 LMLQPGSVP--SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L L PG+ ++++CL +V+ +ELKDDEEY++I+ED+++E K+
Sbjct: 277 LSL-PGTTGPNTEILCLMNMVTPEELKDDEEYDDIVEDVKEECQKY 321
>gi|148699340|gb|EDL31287.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_b [Mus musculus]
Length = 356
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 172/294 (58%), Gaps = 24/294 (8%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 339
>gi|119592809|gb|EAW72403.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_b [Homo
sapiens]
Length = 356
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 172/294 (58%), Gaps = 24/294 (8%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 235 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 285
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 286 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 339
>gi|391337926|ref|XP_003743315.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Metaseiulus
occidentalis]
Length = 430
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 184/317 (58%), Gaps = 34/317 (10%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
A+GQIP A P + T Q P PV T TR ARR+YVG +P
Sbjct: 80 ASGQIPATLLAPP--------ITTNHQ----PSQPVIGST--ITRQARRLYVGNIPFGCT 125
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
EQ + +F+ M A A G+ V+ IN +K FAF+E RS++E S AM+ DGI F+
Sbjct: 126 EQEMIDYFNVQMHACAFAQAQ-GNPVLACQINMDKNFAFLEFRSIDETSAAMSFDGINFK 184
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL--EGPDRIFVGGLPYY 376
G +K+RRP DY QP P ++ + + PG + + P ++F+GGLP Y
Sbjct: 185 GQSLKIRRPHDY-----------QPMPGMSESQGSVIPGVVSTVVQDSPHKVFIGGLPNY 233
Query: 377 FTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKT 436
E Q+RELL SFG L+ F+LVKD TG SKGYAFC Y ++++TD A A LNG+++GDK
Sbjct: 234 LNEDQVRELLMSFGQLKAFNLVKDTATGLSKGYAFCEYAEVTITDDAIAGLNGMQLGDKK 293
Query: 437 LTVRRANQGANQPKPEQESVLLHAQQQI-ALQRLMLQPGSVPSKVVCLTQVVSADELKDD 495
L V+RA+ GA + ++ + Q Q+ + + + ++V+CL +V+ DEL+D+
Sbjct: 294 LIVQRASVGA-----KNSNMAVPVQIQVPGMPNVPIGSSGPATEVLCLMNLVTPDELRDE 348
Query: 496 EEYEEILEDMRQEGGKF 512
EEY++ILED++ E K+
Sbjct: 349 EEYDDILEDIQDECNKY 365
>gi|71022561|ref|XP_761510.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
gi|46101379|gb|EAK86612.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
Length = 727
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 174/295 (58%), Gaps = 25/295 (8%)
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
P + Q A R ARR+YVG + ANEQ++ FF++ M + T PG+ V+ +N +
Sbjct: 340 PAELAAQNANRQARRLYVGNITHQANEQNIVAFFNEQMLKLKLGTE-PGEPAVSAQVNVD 398
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS-QPNPNLNLAA 351
K +AFVE R EEA+NAM+ DGI+F+ +K+RRP DY GP +P N+++
Sbjct: 399 KGYAFVEFRHPEEATNAMSFDGIVFQAQSLKIRRPKDYT-------GPDIRPPSNIHVPG 451
Query: 352 VGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
V T P S P +IFVGGLP Y + Q+ ELL++FG LR F+LVKD TG SKG+
Sbjct: 452 VISTNVPDS------PHKIFVGGLPTYLNDDQVIELLQAFGELRAFNLVKDTGTGASKGF 505
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV------LLHAQQQ 463
AFC Y D ++TD+AC LNG+++GD+ L V+RA+ G+ + + L A
Sbjct: 506 AFCEYVDPALTDLACQGLNGMELGDRNLVVQRASVGSEKKAQALAATGANMGALGGAAVP 565
Query: 464 IALQRLMLQPGSV--PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFCS 516
++Q+ G P+ + + +V+ +EL+DDEEY +I+ED+R E K+ S
Sbjct: 566 SSVQKFAGDGGDAGEPTTCMVMLNMVTPEELQDDEEYADIVEDIRDECNKYGAVS 620
>gi|170054347|ref|XP_001863087.1| splicing factor u2af large subunit [Culex quinquefasciatus]
gi|167874693|gb|EDS38076.1| splicing factor u2af large subunit [Culex quinquefasciatus]
Length = 438
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 195/355 (54%), Gaps = 45/355 (12%)
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTG 223
+ RSR R S +D+ PP + A AAGQIP AN +V
Sbjct: 56 KGRSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVAD 99
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
A+PV+ TR ARR+YVG +P E+ + FF+Q M + G G+
Sbjct: 100 TPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNP 153
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY QP
Sbjct: 154 VLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QP 202
Query: 344 NPNLNLAAVGLTPGSAGGL------EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
P + +AV G+ + P +IF+GGLP Y E Q++ELL SFG L+ F+L
Sbjct: 203 MPGMTDSAVAPVQEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNL 262
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD TG SKGYAF Y + S+TD A A LNG+++GDK L V+RA+ GA + +
Sbjct: 263 VKDAATGLSKGYAFAEYVEYSITDQAIAGLNGMQLGDKKLIVQRASVGAKN---ANVAAV 319
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
Q Q+ L+ G P++V+CL +V+ DELKD+EEYE+ILED+++E K+
Sbjct: 320 APVQIQVPGLSLVGSSGP-PTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKY 373
>gi|157132061|ref|XP_001662443.1| splicing factor u2af large subunit [Aedes aegypti]
gi|108881728|gb|EAT45953.1| AAEL002818-PA [Aedes aegypti]
Length = 418
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 195/355 (54%), Gaps = 45/355 (12%)
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTG 223
+ RSR R S +D+ PP + A AAGQIP AN +V
Sbjct: 36 KGRSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVAD 79
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
A+PV+ TR ARR+YVG +P E+ + FF+Q M + G G+
Sbjct: 80 TPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNP 133
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY QP
Sbjct: 134 VLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QP 182
Query: 344 NPNLNLAAVGLTPGSAGGL------EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
P + +A P G+ + P +IF+GGLP Y E Q++ELL SFG L+ F+L
Sbjct: 183 MPGMTDSAAVSVPEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNL 242
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD TG SKGYAF Y + ++TD A A LNG+++GDK L V+RA+ GA + +
Sbjct: 243 VKDAATGLSKGYAFAEYVEYTITDQAIAGLNGMQLGDKKLIVQRASVGAKN---ANVAAV 299
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
Q Q+ L+ G P++V+CL +V+ DELKD+EEYE+ILED+++E K+
Sbjct: 300 APVQIQVPGLSLVGSSGP-PTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKY 353
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 178/312 (57%), Gaps = 30/312 (9%)
Query: 208 PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS 267
PA+PG P+ P L + + QATRHARRVYVGG P NE +A+F +
Sbjct: 182 PAVPGKPPD--PADQAAHEARLAALQAAGINVQATRHARRVYVGGFPDNTNEPELASFIA 239
Query: 268 QVMAAIGGNTAG--PGD---AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 322
+ AIGG + P + V++VYIN +K FAFVE R+VEEASNAMALDG++ G+ +
Sbjct: 240 NALVAIGGASGAYDPDNGMTCVLSVYINRDKLFAFVEFRTVEEASNAMALDGVVMAGSQL 299
Query: 323 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 382
+VRRP+DY P AA +GP+ P +LNLAAVGL PG G G +++VG LP Y TE Q+
Sbjct: 300 RVRRPNDYQPQQAALIGPTTPADSLNLAAVGLIPGVNGQSSG-RKLYVGNLPPYLTELQV 358
Query: 383 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
ELL+SFG ++ F+LV D++TG KGY F Y D + + A L G+++GDK L V+RA
Sbjct: 359 LELLQSFGAVQAFNLVVDKDTGTLKGYGFFEYADAAADEAAMEGLTGMRLGDKVLNVKRA 418
Query: 443 NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP------SKVVCLTQVVSADELKD-- 494
+ Q + Q PGS+P S+ V LT +V+ +EL D
Sbjct: 419 AY-------DGGVGQGVGQASGSAQAPGFAPGSLPANGESASECVRLTNMVTREELTDPT 471
Query: 495 -------DEEYE 499
D + E
Sbjct: 472 EAREILEDTQEE 483
>gi|403413555|emb|CCM00255.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 195/353 (55%), Gaps = 35/353 (9%)
Query: 174 KSKRISGFDM-APPASAMLAAGAGAAAAGQIPGAN-------PAIPGMFPNMFPLVTGQQ 225
+ ++ SG+D+ AP A A +PGAN AIPG+ P M G
Sbjct: 156 RKRKASGWDVHAPGYEQYTAMQAKQTGLFNLPGANRTQIPPILAIPGLPPPMPVQSFGMG 215
Query: 226 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
G P + +R +RR+Y+G + P NEQ++A FF+ M + T GPG+ V+
Sbjct: 216 IGGNPNL---------SRQSRRLYIGSITPDINEQNLADFFNSKMKEMSIGTGGPGNPVL 266
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
V N+EK +AFVE RS E+A+ AMA DGIIF P+K+RRP DY ++ PS P
Sbjct: 267 AVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYGG--MDSIAPSMHVP 324
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
+ V P S ++IFVGGLP Y E Q+ ELL+SFG L+ F+LV++ G
Sbjct: 325 GVVSTNV---PDSI------NKIFVGGLPTYLNEEQVMELLKSFGDLKAFNLVRENGNGP 375
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
SKG+AF Y D VTD+A +L+G+++GDK L V+RA+ GA +P + Q+
Sbjct: 376 SKGFAFFEYVDPGVTDVAIQSLSGMELGDKFLVVQRASVGAKPGQPPIPGLY----DQVE 431
Query: 466 LQRLMLQPGSVP---SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFC 515
+ R +L G V ++++ + +V ++L DD+EY ++ ED+++E K+
Sbjct: 432 IPRPILPAGDVEGTDARILLMLNMVVPEDLTDDQEYADVYEDVKEECSKYGLV 484
>gi|291241059|ref|XP_002740425.1| PREDICTED: U2 (RNU2) small nuclear RNA auxiliary factor 2-like
[Saccoglossus kowalevskii]
Length = 466
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 176/283 (62%), Gaps = 11/283 (3%)
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
MP+ + Q TR ARR+YVG +P E+++ FF++ M + T G+ V+ V I+
Sbjct: 128 MPI--VGSQMTRQARRLYVGNIPFGVTEEAMMDFFNRQMKSFR-ITQAQGNPVLAVQIDL 184
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
K FAF+E RSV+E + AMA DGI+F+G +K+RRP DY P PS P+ +
Sbjct: 185 NKNFAFLEFRSVDETTQAMAFDGILFQGQSLKIRRPKDYQPVPGMAEMPSVHVPDYLFSP 244
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
G+ S + P +IF+GGLP Y E Q++ELL SFG L+ F+LVKD T SKGYAF
Sbjct: 245 TGVV--STVVPDSPHKIFIGGLPNYLNEDQVKELLTSFGELKAFNLVKDSATSLSKGYAF 302
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLML 471
C Y D +TD A A LNG+++GDK L V+RA+ GA + Q + AQ I + + +
Sbjct: 303 CEYIDEKITDQAIAGLNGMQLGDKKLIVQRASVGAKNAQTAQ----MIAQLNIQVPGVNI 358
Query: 472 QPGSV--PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
G V ++V+CL +V+ DEL+D+EEYEEIL+D+RQE GK+
Sbjct: 359 GQGLVGPTTEVLCLMNMVTPDELQDEEEYEEILDDVRQECGKY 401
>gi|226483519|emb|CAX74060.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
gi|226483521|emb|CAX74061.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 518
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 203/379 (53%), Gaps = 47/379 (12%)
Query: 157 SRGRSEHRSRSRSRSRSKSKRI--------SGFDMAPPAS--AMLAAG---AGAAAAGQI 203
SR R R SR RS S + GF+ PA A+ A+G AAGQ+
Sbjct: 101 SRDRKSKRHHSRHRSASSPTLVYKYWDVPPPGFEHVTPAQYKALQASGQIPVNVYAAGQV 160
Query: 204 PGANPAIPGMFPNM-FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV 262
P +P PN L T F V R ARR+YVG +P TA E+++
Sbjct: 161 P-----MPVHAPNAPLTLTTNVPFAGSAV----------CRQARRLYVGNIPFTATEENM 205
Query: 263 ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 322
FF++ M A G A G+ ++ V IN EK FAF+E RSV+E + +ALDG++F+ +
Sbjct: 206 MEFFNKQMRAQGLIQA-EGNPIIAVQINMEKNFAFLEFRSVDETTQGLALDGVLFQNQAL 264
Query: 323 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 382
K+RRP DY P + PS P + V + P +IFVGGLP Y E Q+
Sbjct: 265 KLRRPRDYAPLPGVSEQPSVIVPGVVSTVVQ---------DSPHKIFVGGLPNYLNEDQV 315
Query: 383 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
+ELL SFGPL+GF+LVKD TG SKGYAFC Y D +VTD ACA LNG+++GDK L V+RA
Sbjct: 316 KELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDANVTDHACAGLNGMQLGDKKLIVQRA 375
Query: 443 NQGANQPKPEQESVLLH--------AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKD 494
+ GA LL Q + ++ G P++V+CL ++ EL+D
Sbjct: 376 SVGAKHTTGVLPQTLLSLPGLEDGTVQNTTGSGNITIRSGGPPTEVLCLMNMIETSELED 435
Query: 495 DEEYEEILEDMRQEGGKFA 513
DEEYE+I+ED+R E K+
Sbjct: 436 DEEYEDIVEDVRAECSKYG 454
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 204/374 (54%), Gaps = 47/374 (12%)
Query: 159 GRSEHRSRSRSRSRSKSKR---ISGFDMAPPA----SAMLAAGAGAAAAGQIPGAN---- 207
G E RS + + S+R SG+D+ P +AM A G +PGAN
Sbjct: 31 GTPERRSPTPPSAVPISQRKRKASGWDVHAPGYEQYTAMQAKQTGLF---NLPGANRTQI 87
Query: 208 ---PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVAT 264
AIPG+ P M G G P + +R +RR+Y+G + P NEQ++A
Sbjct: 88 PPILAIPGLPPPMPVQSFGMGIGGNPNL---------SRQSRRLYIGSITPDINEQNLAE 138
Query: 265 FFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 324
FF+ M + T PG+ V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K+
Sbjct: 139 FFNGKMKEMDIGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKI 198
Query: 325 RRPSDYNPSLAATLGPSQPNPNLNLAAVGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQI 382
RRP DY GP P +++ V T P SA +++FVGGLP Y E Q+
Sbjct: 199 RRPKDYG-------GPDVLAPMMHVPGVVSTNVPDSA------NKVFVGGLPMYLNEEQV 245
Query: 383 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
ELL+SFG L+ F+LV++ G SKG+AF Y D SVTD+A +L+G+++GDK L V+RA
Sbjct: 246 MELLKSFGELKAFNLVRENGNGPSKGFAFFEYVDPSVTDVAIQSLSGMELGDKYLVVQRA 305
Query: 443 NQGANQPKPEQESVLLHAQQQIALQRLMLQPG---SVPSKVVCLTQVVSADELKDDEEYE 499
+ GA KP Q + + R ++ S S+++ + +V +EL+DD+EY
Sbjct: 306 SVGA---KPGQSPIDEMYGSPAPIPRPIMPATDIDSTQSRILLMLNMVVPEELQDDQEYA 362
Query: 500 EILEDMRQEGGKFA 513
+I ED+ +E G++
Sbjct: 363 DIYEDITEECGRYG 376
>gi|357155772|ref|XP_003577233.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 446
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 119/145 (82%), Gaps = 5/145 (3%)
Query: 180 GFDMAPP-ASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
GFD+ P A A++ A Q+PG+ +IPGMFPNM P GQ F L VM QAMT
Sbjct: 141 GFDLGPTSAQAVVPQFPTIPAPSQLPGS--SIPGMFPNMLPFAVGQ-FNPL-VMQPQAMT 196
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
QQATRHARRVYVGGLPPTANEQSVA +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFV
Sbjct: 197 QQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 256
Query: 299 EMRSVEEASNAMALDGIIFEGAPVK 323
EMRSVEEASNAMALDGI+FEGAPVK
Sbjct: 257 EMRSVEEASNAMALDGILFEGAPVK 281
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 115/174 (66%), Gaps = 28/174 (16%)
Query: 367 RIFVGGLP---------YYFTEAQIRELLESFGPL-----------RGFDLVKDR---ET 403
R++VGGLP YF + + GP + F V+ R E
Sbjct: 205 RVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 264
Query: 404 GNSKGYAFCVYQ-----DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 458
N+ +++ DL+VTDIACAALNGIKMGDKTLTVRRANQG+ QP+PEQE++LL
Sbjct: 265 SNAMALDGILFEGAPVKDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQENILL 324
Query: 459 HAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
AQQQ+ LQ+L+ Q G++P+KV+CLTQVV+ADELKDDEEYE+I+EDMR E GK+
Sbjct: 325 QAQQQVQLQKLVYQVGALPTKVICLTQVVTADELKDDEEYEDIMEDMRLEAGKY 378
>gi|449669310|ref|XP_004206989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Hydra
magnipapillata]
Length = 480
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 164/286 (57%), Gaps = 18/286 (6%)
Query: 231 VMPVQAMTQ--QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVY 288
V+P A+ Q Q T ARR+Y G LP E + FF+ M PG+ V+
Sbjct: 143 VIPATALPQGAQMTMQARRLYCGNLPFGITEDLMVDFFNAKMRE-SDMARQPGNPVLACQ 201
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN 348
IN EK FAF+E RSVEE + AMA DGII +G +K+RRP DY P + G + P
Sbjct: 202 INLEKNFAFLEFRSVEETTLAMAFDGIILQGQALKIRRPKDYQP-IPGINGMAYPTLFAE 260
Query: 349 LAAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 406
A + PG + + +++FVGGLP Y E Q++ELL +FG LR F+LVKD TG S
Sbjct: 261 SQATHI-PGVVSTVVSDTINKVFVGGLPNYLNEDQVKELLSTFGELRAFNLVKDSATGLS 319
Query: 407 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIAL 466
KGYAFC Y D+ +TD+A A +NG+++GDK L V+RA+ G+ Q+ +
Sbjct: 320 KGYAFCEYVDIGITDVAIAGMNGMQLGDKKLIVQRASVGSKT-----------MTAQLNI 368
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L + ++CL +V A+EL DDE+Y+EI ED+R+E K+
Sbjct: 369 PGFDLNKEITATNILCLMNMVVAEELMDDEDYDEIFEDIREECSKY 414
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 195/363 (53%), Gaps = 27/363 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGM 213
+RG + E RS K K +D+ PP + A AAGQI +
Sbjct: 326 TRGAKEEQGGWIRSPCHEKKKVRKYWDVPPPGFEHVTPMQYKAMQAAGQILAT-----AL 380
Query: 214 FPNMFPLVTGQQFGALPV--MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA 271
P M P G L V MPV + Q TR ARR+YVG +P E+S+ F + M
Sbjct: 381 LPTMTP-------GGLAVTPMPVPVVGSQMTRQARRLYVGTIPFGITEESMLDFLNTQMH 433
Query: 272 AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 331
+ G T PG+ ++ V IN +K FAF+E RSV+E + A+A DGIIF+G +K+RRP DY
Sbjct: 434 -LRGLTQAPGNPILAVQINLDKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQ 492
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
P + PS P + + P SA ++F+GGLP Y + Q++ELL S G
Sbjct: 493 PLPGMSGSPSVYVPGV---VSTIVPDSA------HKLFIGGLPNYLNDDQVKELLTSVGI 543
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKP 451
LR F+LVKD TG SKGYAFC Y D++VTD A A LNG+ +GDK L V+RA+ GA
Sbjct: 544 LRAFNLVKDSITGLSKGYAFCEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVGAKNVAL 603
Query: 452 EQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
+ Q L +Q G P+ V+CL +V EL DDEEYEEI++D+R E K
Sbjct: 604 SIINQTPVTLQVPGLTSSQVQMGGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNK 663
Query: 512 FAF 514
+
Sbjct: 664 YGL 666
>gi|384496094|gb|EIE86585.1| hypothetical protein RO3G_11296 [Rhizopus delemar RA 99-880]
Length = 502
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 186/343 (54%), Gaps = 43/343 (12%)
Query: 174 KSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLV---TGQQFGALP 230
+ +R+ +DMAP AG A Q+ + G+FP +V T Q F
Sbjct: 136 RPRRLHNWDMAP-------AGMEGMTAQQV-----KMTGLFPLPGQVVGTRTPQSFQP-- 181
Query: 231 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
P Q M + ++++YVG +P T +E ++ FF+ + + VV V IN
Sbjct: 182 --PPQRMEDATPKQSKKLYVGQIPSTTDEVTLCDFFNATIR----HELQDKTPVVGVQIN 235
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
HEK FAF+E + ++A+ M LDGI F+G +K+RRP+ Y P P + P L
Sbjct: 236 HEKNFAFIEFHTSQQATACMVLDGISFQGNTLKIRRPNHYQP-------PEEQVPGL--- 285
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
S + P+++FVGGLP Y T+ Q+ ELL SFG LR F+LVKD TG +KG+A
Sbjct: 286 -------STNVPDTPNKVFVGGLPVYLTDNQVMELLTSFGELRAFNLVKDTATGANKGFA 338
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y D SVTD+AC LNG+++GDK L V+RA+ GA P+ S + + +
Sbjct: 339 FCEYADPSVTDLACQGLNGMELGDKKLIVQRASVGAKHIPPDYMSGPILPANYVPVTSAK 398
Query: 471 LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ ++V+ L +VS +EL+DDEEY++I ED+ +E KF
Sbjct: 399 EEDA---TRVLQLMNMVSPEELEDDEEYQDIWEDIAEECAKFG 438
>gi|358338608|dbj|GAA57078.1| splicing factor U2AF large subunit [Clonorchis sinensis]
Length = 518
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 206/428 (48%), Gaps = 58/428 (13%)
Query: 81 DREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKD 140
DR+ D++ + DR KDR R R R+ S E DR D + R
Sbjct: 38 DRDGESDINSTEYLDR-----KDRSPRHRKRDSSSE------DRGRDRKRDKKRSRSRSR 86
Query: 141 YDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPA---------SAML 191
R R RS+HR SR RS + +D+ PP AM
Sbjct: 87 SRERRRHSRDRHRDRSRERRSKHR-HSRHRSETPPLIYKYWDVPPPGFEHVTPAQYKAMQ 145
Query: 192 AAG---AGAAAAGQIPGANPAIPGMFPNM-FPLVTGQQFGALPVMPVQAMTQQATRHARR 247
A+G AAGQIP +P PN L T F V R ARR
Sbjct: 146 ASGQIPVNVYAAGQIP-----MPAHAPNAPLTLTTNIPFAGSAV----------CRQARR 190
Query: 248 VYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEAS 307
+YVG +P TA E+++ FF++ M A G G ++ V IN EK FAF+E RSV+E +
Sbjct: 191 LYVGNIPFTATEENMMEFFNKQMRA-QGLVQAEGSPIIAVQINMEKNFAFLEFRSVDETT 249
Query: 308 NAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDR 367
+ALDGI+F +K+RRP DY P + PS P + V + P +
Sbjct: 250 QGLALDGILFHNQALKLRRPRDYAPLPGVSETPSVIVPGVVSTVVQ---------DSPHK 300
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVGGLP Y E Q++ELL SFGPL+GF+LVKD TG SKGYAFC Y D +VTD ACA L
Sbjct: 301 VFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDPNVTDHACAGL 360
Query: 428 NGIKMGDKTLTVRRANQGANQPKPEQESVLLH--------AQQQIALQRLMLQPGSVPSK 479
NG+++GDK L V+RA+ GA LL Q + ++ G P++
Sbjct: 361 NGMQLGDKKLIVQRASVGAKHNATTAAPALLQLPGLTDTLVQNTTGTGNITIRSGGPPTE 420
Query: 480 VVCLTQVV 487
V+CL ++
Sbjct: 421 VLCLMNMI 428
>gi|388856534|emb|CCF49840.1| related to pre-mRNA splicing factor U2AF large chain [Ustilago
hordei]
Length = 718
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 173/293 (59%), Gaps = 21/293 (7%)
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
P + Q R ARR+YVG + +ANE ++ FF++ M + T PG+ V+ +N +
Sbjct: 330 PEEVAQQNNNRQARRLYVGNITHSANEPNMVAFFNEQMLKLKLGTE-PGEPAVSAQVNVD 388
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS-QPNPNLNLAA 351
K +AFVE R EEA+NAM+ DGI+F+G +K+RRP DY GP +P N+++
Sbjct: 389 KGYAFVEFRHPEEATNAMSFDGIVFQGQSLKIRRPKDYT-------GPDVRPASNIHVPG 441
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
V S + P +IFVGGLP Y T+ Q+ ELL++FG LR F+LVKD G SKG+AF
Sbjct: 442 VI----STNVPDSPHKIFVGGLPTYLTDDQVIELLQAFGELRAFNLVKDTANGASKGFAF 497
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ------PKPEQESVLLHAQQQIA 465
C Y D ++TD+AC LNG+++GD+ L V+RA+ G+ + L A +
Sbjct: 498 CEYVDTALTDLACQGLNGMELGDRNLVVQRASVGSEKKAQAIAATGANAGALGDAGMPSS 557
Query: 466 LQRLMLQPGSV--PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFCS 516
+Q+ + G P + + +V+ +EL+DDEEY +I+ED+R+E K+ +
Sbjct: 558 VQQFAGEGGDAGEPRSCMVMLNMVTPEELQDDEEYADIVEDIREECTKYGTVT 610
>gi|309266895|ref|XP_003086891.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Mus
musculus]
Length = 493
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 195/363 (53%), Gaps = 27/363 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGM 213
+RG + E RS K K +D+ PP + A AAGQI +
Sbjct: 89 TRGAKEEQGGWIRSPCHEKKKVRKYWDVPPPGFEHVTPMQYKAMQAAGQILAT-----AL 143
Query: 214 FPNMFPLVTGQQFGALPV--MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA 271
P M P G L V MPV + Q TR ARR+YVG +P E+S+ F + M
Sbjct: 144 LPTMTP-------GGLAVTPMPVPVVGSQMTRQARRLYVGTIPFGITEESMLDFLNTQMH 196
Query: 272 AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 331
+ G T PG+ ++ V IN +K FAF+E RSV+E + A+A DGIIF+G +K+RRP DY
Sbjct: 197 -LRGLTQAPGNPILAVQINLDKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQ 255
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
P + PS P + + P SA ++F+GGLP Y + Q++ELL S G
Sbjct: 256 PLPGMSGSPSVYVPGV---VSTIVPDSA------HKLFIGGLPNYLNDDQVKELLTSVGI 306
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKP 451
LR F+LVKD TG SKGYAFC Y D++VTD A A LNG+ +GDK L V+RA+ GA
Sbjct: 307 LRAFNLVKDSITGLSKGYAFCEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVGAKNVAL 366
Query: 452 EQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
+ Q L +Q G P+ V+CL +V EL DDEEYEEI++D+R E K
Sbjct: 367 SIINQTPVTLQVPGLTSSQVQMGGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNK 426
Query: 512 FAF 514
+
Sbjct: 427 YGL 429
>gi|148697816|gb|EDL29763.1| mCG68163 [Mus musculus]
Length = 472
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 195/363 (53%), Gaps = 27/363 (7%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGM 213
+RG + E RS K K +D+ PP + A AAGQI +
Sbjct: 68 TRGAKEEQGGWIRSPCHEKKKVRKYWDVPPPGFEHVTPMQYKAMQAAGQILAT-----AL 122
Query: 214 FPNMFPLVTGQQFGALPV--MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA 271
P M P G L V MPV + Q TR ARR+YVG +P E+S+ F + M
Sbjct: 123 LPTMTP-------GGLAVTPMPVPVVGSQMTRQARRLYVGTIPFGITEESMLDFLNTQMH 175
Query: 272 AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 331
+ G T PG+ ++ V IN +K FAF+E RSV+E + A+A DGIIF+G +K+RRP DY
Sbjct: 176 -LRGLTQAPGNPILAVQINLDKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQ 234
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
P + PS P + + P SA ++F+GGLP Y + Q++ELL S G
Sbjct: 235 PLPGMSGSPSVYVPGV---VSTIVPDSA------HKLFIGGLPNYLNDDQVKELLTSVGI 285
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKP 451
LR F+LVKD TG SKGYAFC Y D++VTD A A LNG+ +GDK L V+RA+ GA
Sbjct: 286 LRAFNLVKDSITGLSKGYAFCEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVGAKNVAL 345
Query: 452 EQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
+ Q L +Q G P+ V+CL +V EL DDEEYEEI++D+R E K
Sbjct: 346 SIINQTPVTLQVPGLTSSQVQMGGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNK 405
Query: 512 FAF 514
+
Sbjct: 406 YGL 408
>gi|409040470|gb|EKM49957.1| hypothetical protein PHACADRAFT_264412 [Phanerochaete carnosa
HHB-10118-sp]
Length = 575
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 198/365 (54%), Gaps = 41/365 (11%)
Query: 159 GRSEHRSRSRSRSRSKSKR---ISGFDM-APPASAMLAAGAGAAAAGQIPGAN------- 207
G E RS + S + S S+R SG+D+ AP A A +PGAN
Sbjct: 133 GTPERRSPTPSDAVSLSQRKRKASGWDIHAPGYEQYTAMQAKQTGLFNLPGANRTQIPPI 192
Query: 208 PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS 267
A+PG+ P M G G P + +R +RR+Y+G + P NEQ++A FF+
Sbjct: 193 LAVPGLPPPMPVQSFGMGMGVNPNL---------SRQSRRLYIGSITPEINEQNLADFFN 243
Query: 268 QVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRP 327
+ M + T PG+ V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K+RRP
Sbjct: 244 EKMKEMSIGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLSGPLKIRRP 303
Query: 328 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 387
DY S L PS P + V P S +++FVGGLP Y E Q+ ELL
Sbjct: 304 KDYGGS--ENLAPSMHVPGVVSTNV---PDSI------NKVFVGGLPPYLNEEQVMELLT 352
Query: 388 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA- 446
SFG L+ F+LV++ G SKG+AF Y D +VTD+A +LN +++GDK L V+RA+ GA
Sbjct: 353 SFGDLKAFNLVRENGNGPSKGFAFFEYVDPAVTDVAIQSLNEMELGDKYLVVQRASVGAK 412
Query: 447 NQPKPEQESVLLHAQQQIALQRLMLQPG---SVPSKVVCLTQVVSADELKDDEEYEEILE 503
N P Q A + + +L G V ++++ + +V ++L DD+EY +I E
Sbjct: 413 NGQIPPQ------ALYPTEIPKPILPAGDLEGVEARILLMLNMVVPEDLNDDQEYADIYE 466
Query: 504 DMRQE 508
D++ E
Sbjct: 467 DVKDE 471
>gi|195999450|ref|XP_002109593.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
gi|190587717|gb|EDV27759.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
Length = 476
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 181/328 (55%), Gaps = 47/328 (14%)
Query: 192 AAGAGAAAAGQI-PGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYV 250
A G AAA I P A P +G Q TR +RR+YV
Sbjct: 126 AQGVPAAAGLGIDPTAAPG------------SGSQI---------------TRQSRRLYV 158
Query: 251 GGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM 310
G +P EQ++ FF++ M G A GD V+ V IN +K FAF+E RS+EE +NAM
Sbjct: 159 GNIPFGITEQAMMDFFNEKMVTTGLTQAN-GDPVLAVQINFDKNFAFLEFRSIEETTNAM 217
Query: 311 ALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFV 370
A DGI+F+ +K+RRP DY P PN + N+ G+ S + P ++F+
Sbjct: 218 AFDGIMFQNQALKIRRPKDYQPPTG------DPNSSANIHVPGVI--STVVPDTPHKLFI 269
Query: 371 GGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGI 430
GGLP Y TE Q++ELL+SFG L+ F+LVKD TG SKGYAFC Y + VTD A A LN +
Sbjct: 270 GGLPNYLTEDQVKELLQSFGELKAFNLVKDSATGLSKGYAFCEYVVVEVTDQAIAGLNNM 329
Query: 431 KMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP-----GSVPSKVVCLTQ 485
++G+K L V+RA+ GA SV + + +Q LQ G V ++++ L
Sbjct: 330 QLGEKKLVVQRASVGAKH----NYSVRCLSGIPVTVQVPGLQISNNALGEV-TEILQLMN 384
Query: 486 VVSADELKDDEEYEEILEDMRQEGGKFA 513
+V+ +EL DDEEYE+I+ED+R E K A
Sbjct: 385 MVTEEELVDDEEYEDIIEDVRAEVSKIA 412
>gi|402590758|gb|EJW84688.1| hypothetical protein WUBG_04401 [Wuchereria bancrofti]
Length = 477
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 178/318 (55%), Gaps = 45/318 (14%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP N + P + P VT Q +RR+YVG +P +
Sbjct: 140 AAGQIPRNN--VQSAVPVVGPSVTCQ--------------------SRRLYVGNIPFGCS 177
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E ++ FF+Q M G A PG+ V+ +N +K FAF+E RS++E + MA DGI F
Sbjct: 178 EDAMLDFFNQQMHLCGLAQA-PGNPVLACQMNLDKNFAFIEFRSIDETTAGMAFDGINFM 236
Query: 319 GAPVKVRRPSDYNP-SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYF 377
G +K+RRP DY P S + LG N+ + P S P +IF+GGLP Y
Sbjct: 237 GQQLKIRRPRDYQPMSTSYDLG--------NMMVSNIVPDS------PHKIFIGGLPSYL 282
Query: 378 TEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL 437
Q++ELL SFG L+ F+LV ++ TG SKGYAF Y D S+TD A A LNG+++GDK L
Sbjct: 283 NAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFAEYLDPSLTDQAIAGLNGMQLGDKNL 342
Query: 438 TVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS-VPSKVVCLTQVVSADELKDDE 496
V+ + A + +V + QI + + L G+ P++V+CL +V+ DELKDDE
Sbjct: 343 VVQLSCANA------RNNVAQNTFPQIQVAGIDLSHGAGPPTEVLCLMNMVTEDELKDDE 396
Query: 497 EYEEILEDMRQEGGKFAF 514
EYE+ILED+R+E K+
Sbjct: 397 EYEDILEDIREECAKYGI 414
>gi|343426615|emb|CBQ70144.1| related to pre-mRNA splicing factor U2AF large chain [Sporisorium
reilianum SRZ2]
Length = 710
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 170/296 (57%), Gaps = 33/296 (11%)
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
P + Q A R ARR+YVG + NE ++ FF++ M + T PG+ V+ +N +
Sbjct: 326 PAELAAQNANRQARRLYVGNITHQTNEHNIVAFFNEQMLKLKLGTE-PGEPAVSAQVNVD 384
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS-QPNPNLNLAA 351
K +AFVE R +EA+NAM+ DGI+F+ +K+RRP DY GP +P N+++
Sbjct: 385 KGYAFVEFRHPDEATNAMSFDGIVFQAQSLKIRRPKDYT-------GPDVRPPSNIHVPG 437
Query: 352 VGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
V T P S P +IFVGGLP Y T+ Q+ ELL++FG LR F+LVKD TG SKG+
Sbjct: 438 VISTNVPDS------PFKIFVGGLPTYLTDDQVIELLQAFGELRAFNLVKDTGTGASKGF 491
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFC Y D ++TD+AC LNG+++GD+ L V+RA+ G+ + + L +
Sbjct: 492 AFCEYVDTALTDLACQGLNGMELGDRNLVVQRASVGSEK----KAQALAATGANSGALGI 547
Query: 470 MLQPGSV------------PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
P SV P+ + + +V+ +EL+DDEEY +I+ED+R E K+
Sbjct: 548 AAVPSSVQQSAGEDGDAGEPTSCMVMLNMVTPEELQDDEEYADIVEDIRDECTKYG 603
>gi|256074204|ref|XP_002573416.1| splicing factor u2af large subunit [Schistosoma mansoni]
gi|238658595|emb|CAZ29648.1| splicing factor u2af large subunit, putative [Schistosoma mansoni]
Length = 521
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 149/376 (39%), Positives = 201/376 (53%), Gaps = 47/376 (12%)
Query: 160 RSEHRSRSRSRSRSKSKRI--------SGFDMAPPAS--AMLAAG---AGAAAAGQIPGA 206
R R SR RS S + GF+ PA A+ A+G AAGQ+P
Sbjct: 107 RKSKRHHSRHRSASSPTLVYKYWDVPPPGFEHVTPAQYKALQASGQIPVNVYAAGQVP-- 164
Query: 207 NPAIPGMFPNM-FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATF 265
+P PN L T F V R ARR+YVG +P TA E+++ F
Sbjct: 165 ---MPVHAPNAPLTLTTNVPFAGSAV----------CRQARRLYVGNIPFTATEENMMEF 211
Query: 266 FSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR 325
F++ M A G A G+ ++ V IN EK FAF+E RSV+E + +ALDG++F+ +K+R
Sbjct: 212 FNKQMRAQGLIQA-EGNPIIAVQINMEKNFAFLEFRSVDETTQGLALDGVLFQNQALKLR 270
Query: 326 RPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIREL 385
RP DY P + PS P + V + P +IFVGGLP Y E Q++EL
Sbjct: 271 RPRDYAPLPGVSEQPSVIVPGVVSTVVQ---------DSPHKIFVGGLPNYLNEDQVKEL 321
Query: 386 LESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG 445
L SFGPL+GF+LVKD TG SKGYAFC Y D +VTD ACA LNG+++GDK L V+RA+ G
Sbjct: 322 LLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDANVTDHACAGLNGMQLGDKKLIVQRASVG 381
Query: 446 ANQPKPEQESVLLH--------AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEE 497
A LL Q + ++ G P++V+CL ++ EL+DDEE
Sbjct: 382 AKHTTGVLPQTLLSLPGLEDGTVQNTTGSGNITIRSGGPPTEVLCLMNMIETSELEDDEE 441
Query: 498 YEEILEDMRQEGGKFA 513
YE+I+ED+R E K+
Sbjct: 442 YEDIVEDVRAECSKYG 457
>gi|426244214|ref|XP_004015921.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Ovis aries]
Length = 471
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 206/368 (55%), Gaps = 37/368 (10%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 67 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 125
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 126 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 175
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 176 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 235
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V PGSA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 236 LPGMSENPSVYVPGVVSTVV---PGSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 286
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTD-IACAALNGIKMGDKTLTVRRANQGANQPKP 451
+ F+LVKD TG SKGYAFC Y D++VTD ++ A + +G RA +GA P
Sbjct: 287 KAFNLVKDSATGLSKGYAFCEYVDINVTDQVSPAPAHPALLGSPL----RAGRGACSSSP 342
Query: 452 EQESVLLHAQQQIALQR--LM---LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMR 506
++ Q + LQ LM +Q G P++V+CL +V +EL DDEEYEEI+ED+R
Sbjct: 343 FASTI---NQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVR 399
Query: 507 QEGGKFAF 514
E GK+
Sbjct: 400 DECGKYGL 407
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 183/324 (56%), Gaps = 47/324 (14%)
Query: 217 MFPLVTGQQFGALPVMPVQAMT---------QQATRHARRVYVGGLPPTANEQSVATFFS 267
M P + G LP +P A+T QQ+TRHARRVYVGG A++ V FF+
Sbjct: 52 MLPTLGGGPSSGLPSLPQTAVTGAVPMYGDTQQSTRHARRVYVGGNFGDASDFEVLAFFN 111
Query: 268 QVMAAIGGNTA----GPGDAVVNVYINHEKKFAFVEMRSVEEASNA-MALDGIIFEGAPV 322
Q++ N + P VV + +N +K FAF+E+ SV ++ M LDG+ F G P+
Sbjct: 112 QII-----NESLERPSPAGPVVAIQVNRQKHFAFLELNSVPLTTSVIMQLDGVPFRGNPL 166
Query: 323 KVRRPSDYNPSL------------AATLGPSQPNPNLNLAAVGLT-PGSAGGLEGPDRIF 369
KV+RP+DY+P L A Q + L +A+ GLT PG+ + P +IF
Sbjct: 167 KVKRPTDYHPELLPLDTPPPPTLKVANFRALQASGALPMASTGLTAPGANSVPDSPYKIF 226
Query: 370 VGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNG 429
VGGLPY+ T+ Q+RELL +FGPLRGFDL KD TG SKGY FC Y D +V D+A L+G
Sbjct: 227 VGGLPYHVTDDQVRELLSAFGPLRGFDLKKDPATGMSKGYGFCEYIDHAVGDVAIQGLHG 286
Query: 430 IKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVS 488
+ +G KTLTV+ A L Q Q + + P +KV+ L +V+
Sbjct: 287 MDLGGKTLTVKYA--------------LASQQLQQQQSMQQMLLSTTPATKVLVLANMVT 332
Query: 489 ADELKDDEEYEEILEDMRQEGGKF 512
DELKDD+EY+EI+ED+R+E KF
Sbjct: 333 PDELKDDQEYQEIVEDVREEVAKF 356
>gi|302854386|ref|XP_002958701.1| hypothetical protein VOLCADRAFT_121741 [Volvox carteri f.
nagariensis]
gi|300255941|gb|EFJ40221.1| hypothetical protein VOLCADRAFT_121741 [Volvox carteri f.
nagariensis]
Length = 294
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 155/255 (60%), Gaps = 30/255 (11%)
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
+E S+ F+ VM A G T PG V++ Y+N+EK+FAF+E RSVEE SNAMA DG+
Sbjct: 2 SEVSLTQLFNNVMMAAGATTQ-PGGPVISCYMNNEKRFAFLEFRSVEETSNAMAFDGLQC 60
Query: 318 EGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYF 377
+G +KVRRP DYNP+ A LGP++P+ +NLA +G+ +GP+++FVGGLP Y
Sbjct: 61 QGETLKVRRPHDYNPAAAKLLGPTEPSAKINLALLGVVNTLVE--DGPNKVFVGGLPGYL 118
Query: 378 TEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL 437
+E Q+R++L++FGPLR F+LV DR+TG SKGY FC Y D ++TD+A L+ + +G K L
Sbjct: 119 SEEQVRQILQAFGPLRAFNLVTDRDTGASKGYGFCEYADPNITDVAIQGLSALIVGGKPL 178
Query: 438 TVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEE 497
TVRRAN + S L Q L +L DD E
Sbjct: 179 TVRRANTAG------EASATLQTLIQQQQAAL---------------------DLVDDGE 211
Query: 498 YEEILEDMRQEGGKF 512
Y +++ED+ QE GK+
Sbjct: 212 YMDLMEDVTQEVGKY 226
>gi|443898020|dbj|GAC75358.1| splicing factor U2AF, large subunit [Pseudozyma antarctica T-34]
Length = 699
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 184/320 (57%), Gaps = 32/320 (10%)
Query: 211 PGMFPN-------MFPLVTGQQFGALPVMPVQAM-TQQATRHARRVYVGGLPPTANEQSV 262
PGM+P P GQ P QA+ T + R ARR+YVG + ANE S+
Sbjct: 286 PGMYPQDGQQYTQGQPPFAGQYQQGHPASHNQALATADSGRQARRLYVGNITHQANEPSM 345
Query: 263 ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 322
FF++ M + T PG+ V+ +N +K +AFVE R +EA+NAM+ DGI+F+G +
Sbjct: 346 VAFFNEQMLKLKLGTE-PGEPAVSAQVNVDKGYAFVEFRHPDEATNAMSFDGIVFQGQSL 404
Query: 323 KVRRPSDYNPSLAATLGPS-QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
K+RRP DY GP +P ++++ V S + P +IFVGGLP Y T+ Q
Sbjct: 405 KIRRPKDYT-------GPDVRPPSSIHVPGVI----STNVPDSPFKIFVGGLPTYLTDDQ 453
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
+ ELL++FG LR F+LVKD T SKG+AFC Y D ++TD+AC LNG+++GD+ L V+R
Sbjct: 454 VIELLQAFGELRSFNLVKDPATNASKGFAFCEYVDTALTDLACQGLNGMELGDRNLVVQR 513
Query: 442 ANQGANQPKPEQESVLLHAQQQIAL------QRLMLQPGSV--PSKVVCLTQVVSADELK 493
A+ G+ + + +++ + AL Q+ G P+ + + +V+ +EL+
Sbjct: 514 ASVGSEK---KAQAIAAYGANVGALGVPSSVQQFAGAGGDAGEPTSCMVMLNMVTPEELQ 570
Query: 494 DDEEYEEILEDMRQEGGKFA 513
DDEEY +I+ED+R E KF
Sbjct: 571 DDEEYADIVEDIRDECTKFG 590
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 176/295 (59%), Gaps = 29/295 (9%)
Query: 227 GALPVMPVQAMTQ------QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP 280
G P MPVQ+ +R +RR+Y+G + P NEQ++A FF+ M + T GP
Sbjct: 4 GLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITPEVNEQNLADFFNSKMIEMSIGTGGP 63
Query: 281 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGP 340
G+ V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K+RRP DY G
Sbjct: 64 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG-------GM 116
Query: 341 SQPNPNLNLAAVGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV 398
+P +++ V T P S ++IFVGGLP Y E Q+ ELL+SFG L+ F+LV
Sbjct: 117 EIASPGVHVPGVVSTNVPDSI------NKIFVGGLPTYLNEEQVMELLKSFGDLKAFNLV 170
Query: 399 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL- 457
++ G SKG+AF Y D+ VTD+A +LNG+++GD+ L V+RA+ GA KP ++
Sbjct: 171 RENGNGPSKGFAFFEYVDVGVTDVAIQSLNGMELGDRYLVVQRASVGA---KPGTPGMIP 227
Query: 458 -LHAQQQIALQRLMLQPGSVP---SKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
L Q + R ++ G P S+++ + +V+ D+L DD+EY ++ ED+++E
Sbjct: 228 NLPYDQFPEIPRPIMPAGKDPATDSRILLMLNMVTPDDLTDDQEYGDLYEDVKEE 282
>gi|390596686|gb|EIN06087.1| hypothetical protein PUNSTDRAFT_145447 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 602
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 165/277 (59%), Gaps = 23/277 (8%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R +RR+Y+G + P EQ++A FF+ M + T GPG+ V+ V N+EK +AFVE R
Sbjct: 240 SRQSRRLYIGSITPEITEQNLADFFNSKMIEMSIGTGGPGNPVLAVQCNYEKNYAFVEFR 299
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT--PGSA 359
S E+A+ AMA DGIIF P+K+RRP DY GP L++ V T P S
Sbjct: 300 SAEDATAAMAFDGIIFLNGPLKIRRPKDYG-------GPDPMGAGLHVPGVVSTNVPDSI 352
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+++FVGGLP Y E Q+ ELL SFG L+ F+LV++ G SKG+AF Y D SV
Sbjct: 353 ------NKVFVGGLPAYLNEEQVMELLTSFGELKAFNLVRENGNGPSKGFAFFEYVDESV 406
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-- 477
TD+A ALNG+++GD+ L V+RA+ GA P L +Q L R ++ G V
Sbjct: 407 TDVAIQALNGMELGDRYLVVQRASVGAKPGMPN-----LPYEQFPELPRPIMPAGDVSNR 461
Query: 478 -SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++++ + +V ++L DD+EY +I ED+++E KF
Sbjct: 462 DARILLMLSMVVPEDLVDDQEYADICEDVKEECEKFG 498
>gi|410905623|ref|XP_003966291.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Takifugu
rubripes]
Length = 458
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 227/436 (52%), Gaps = 57/436 (13%)
Query: 87 DMDREKSRDREKDREKD-RHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDR 145
+ +R+ S +++ +R+K+ RHHR +RR D R + + + R R
Sbjct: 6 EFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERRHRRSR 65
Query: 146 EDRHKRRSQSRSRGRS-----EHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAA 200
+++ + + EH + + ++ + +I PA+A+L
Sbjct: 66 SPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQI-------PATALL--------- 109
Query: 201 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 260
P P + P P+V Q TR ARR+YVG +P E+
Sbjct: 110 ---PTMTPDGLAVTPTPVPVVGSQM----------------TRQARRLYVGNIPFGITEE 150
Query: 261 SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 320
S+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G
Sbjct: 151 SMMDFFNAQM-RLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQ 209
Query: 321 PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 380
+K+RRP DY P + PS P + V P SA ++F+GGLP Y +
Sbjct: 210 SLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDD 260
Query: 381 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 440
Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A LNG+++GDK L V+
Sbjct: 261 QVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQ 320
Query: 441 RANQGAN---QPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEE 497
RA+ Q Q V L Q L + Q G VP++V+CL +V+ +EL DDEE
Sbjct: 321 RASXXXXXSFQTSINQTPVTL---QVPGLNSSVTQMGGVPTEVLCLMNMVAPEELLDDEE 377
Query: 498 YEEILEDMRQEGGKFA 513
YEEI+ED+R E GK+
Sbjct: 378 YEEIVEDVRDECGKYG 393
>gi|383854116|ref|XP_003702568.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Megachile
rotundata]
Length = 432
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 186/316 (58%), Gaps = 38/316 (12%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 90 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 131
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 132 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 190
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ PG+ + P +IF+GGLP Y
Sbjct: 191 GQSLKIRRPHDYQPMPGMT-----DNPSMNV------PGTVP--DSPHKIFIGGLPNYLN 237
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 238 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 297
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 298 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 352
Query: 498 YEEILEDMRQEGGKFA 513
YE+ILED+++E K+
Sbjct: 353 YEDILEDIKEECNKYG 368
>gi|340715832|ref|XP_003396412.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Bombus
terrestris]
gi|350417884|ref|XP_003491627.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Bombus impatiens]
Length = 432
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 186/316 (58%), Gaps = 38/316 (12%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 90 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 131
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 132 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 190
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ PG+ + P +IF+GGLP Y
Sbjct: 191 GQSLKIRRPHDYQPMPGMT-----DNPSMNV------PGTVP--DSPHKIFIGGLPNYLN 237
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 238 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 297
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 298 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 352
Query: 498 YEEILEDMRQEGGKFA 513
YE+ILED+++E K+
Sbjct: 353 YEDILEDIKEECNKYG 368
>gi|427789501|gb|JAA60202.1| Putative splicing factor u2af large subunit rrm superfamily
[Rhipicephalus pulchellus]
Length = 462
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/272 (45%), Positives = 169/272 (62%), Gaps = 17/272 (6%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
TR ARR+YVG +P +E+ + +F+ M A G + A PG+ V+ IN +K FAF+E R
Sbjct: 142 TRQARRLYVGNIPFGCSEEEMMDYFNAQMHACGFSQA-PGNPVLACQINLDKNFAFLEFR 200
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
S++E + AMA DGI F+G +K+RRP DY P + PS P + V
Sbjct: 201 SIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMSETPSVAVPGVISTVVQ-------- 252
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ P +IF+GGLP Y E Q+RELL SFG LR F+LVKD TG SKGYAFC Y +++ TD
Sbjct: 253 -DSPHKIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVEVATTD 311
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS-VPSKV 480
A LNG+++GDK L V+RA+ GA + Q V QI + L LQ G+ P++V
Sbjct: 312 QAIMGLNGMQLGDKKLIVQRASVGAKNSQMNQAPV------QIQVPGLQLQGGAGPPTEV 365
Query: 481 VCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+CL +V +ELKD+EEYE+ILED+ +E K+
Sbjct: 366 LCLMNLVCPEELKDEEEYEDILEDIHEECNKY 397
>gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 227/436 (52%), Gaps = 57/436 (13%)
Query: 87 DMDREKSRDREKDREKD-RHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDR 145
+ +R+ S +++ +R+K+ RHHR +RR D R + + + R R
Sbjct: 6 EFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERRHRRSR 65
Query: 146 EDRHKRRSQSRSRGRS-----EHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAA 200
+++ + + EH + + ++ + +I PA+A+L
Sbjct: 66 SPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQI-------PATALL--------- 109
Query: 201 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 260
P P + P P+V Q TR ARR+YVG +P E+
Sbjct: 110 ---PTMTPDGLAVTPTPVPVVGSQM----------------TRQARRLYVGNIPFGITEE 150
Query: 261 SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 320
S+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G
Sbjct: 151 SMMDFFNAQM-RLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQ 209
Query: 321 PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 380
+K+RRP DY P + PS P + V P SA ++F+GGLP Y +
Sbjct: 210 SLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDD 260
Query: 381 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 440
Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A LNG+++GDK L V+
Sbjct: 261 QVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQ 320
Query: 441 RANQG---ANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEE 497
RA+ G A Q V L Q L + Q G VP++V+CL +V+ +EL DDEE
Sbjct: 321 RASVGSKNATLTSINQTPVTL---QVPGLNSSVTQMGGVPTEVLCLMNMVAPEELLDDEE 377
Query: 498 YEEILEDMRQEGGKFA 513
YEEI+ED+R E K+
Sbjct: 378 YEEIVEDVRDECSKYG 393
>gi|307176032|gb|EFN65791.1| Splicing factor U2AF 50 kDa subunit [Camponotus floridanus]
Length = 432
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 186/316 (58%), Gaps = 38/316 (12%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 90 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 131
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 132 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 190
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ PG+ + P +IF+GGLP Y
Sbjct: 191 GQSLKIRRPHDYQPMPGMT-----DNPSMNV------PGTVP--DSPHKIFIGGLPNYLN 237
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 238 EDQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 297
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 298 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 352
Query: 498 YEEILEDMRQEGGKFA 513
YE+ILED+++E K+
Sbjct: 353 YEDILEDIKEECNKYG 368
>gi|328766440|gb|EGF76494.1| hypothetical protein BATDEDRAFT_21058 [Batrachochytrium
dendrobatidis JAM81]
Length = 551
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 167/278 (60%), Gaps = 20/278 (7%)
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q R +R+Y G +P E+ + +F S +G PG+A VN YIN E+ +AFV
Sbjct: 227 QPIARQFKRLYFGNIPVDCIEERILSFASSSYEKLG-LPKDPGNAAVNAYINRERNYAFV 285
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
E RS EEA+ AMALDG +F+G +KVRRP DYNP AA G +QP+ + P +
Sbjct: 286 EFRSPEEATRAMALDGSLFDGNILKVRRPKDYNPE-AAPDGATQPS---------IAPAT 335
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
+ E D+IFVG +P Y ++ Q++ELL++FG L+ F L++D TG SKG+AFC Y D
Sbjct: 336 SAQ-ESLDKIFVGAIPTYLSDDQVQELLKTFGELKTFSLIRDSATGLSKGFAFCEYVDGQ 394
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
+TD AC LNG+++G+K L V+RA+ G+N + ++ Q Q+ ++ P
Sbjct: 395 ITDAACQGLNGMELGEKKLIVQRASVGSN-----KNTISAVGQSQLLPMEILATIAKDPC 449
Query: 479 K---VVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
K V+ L +V +++L DE+Y++IL D+++E KF
Sbjct: 450 KVTRVLLLLNMVVSEDLVSDEDYQDILLDIQEECEKFG 487
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 195/360 (54%), Gaps = 45/360 (12%)
Query: 176 KRISGFDMAPPASAMLAAGAGAAAAGQIPGANPA---IPGMFP-------NMFPL----V 221
+R+S +D+ P + A + I +PG+FP +M L
Sbjct: 145 RRMSMWDVKPTGYEAITAEQAKMSGKTILNIFLLWLRVPGLFPLPGAPRQSMMDLSKLST 204
Query: 222 TGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 281
+ GA+ + QA+ +R +RR++VG +P +E+ + FF+ M+ + T+G
Sbjct: 205 VHKGPGAMNIPNPQALQPLQSRQSRRIHVGNIPQPIDEEHLVNFFNDTMSCLNVTTSG-D 263
Query: 282 DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 341
+ V++ +NHEK +AF+E R E+A+ A+ DGI + +K+RRP DY + P
Sbjct: 264 NPVISAQVNHEKGYAFLEFRQPEDATVAIGFDGISYMNNSLKIRRPMDY-------IVPQ 316
Query: 342 QPNPNLNLAAVGLTPG--SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
P + + PG S + P++I +GGLP Y + Q+ ELL+SFG L+ F+L+K
Sbjct: 317 MPTDDGSYV-----PGVISTNFTDTPNKIHIGGLPTYLDDEQVIELLKSFGELKAFNLIK 371
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE----- 454
D T SKG+AFC Y D VTDIAC LNG+++GDK L V+RA+ G Q KP
Sbjct: 372 DAATNESKGFAFCEYVDPDVTDIACEGLNGMELGDKILVVKRASIGTKQ-KPISTSGGGI 430
Query: 455 -SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+ + A+++ L+ P++V+ + +V+ +EL+DD+EYEEI ED+R E K+
Sbjct: 431 ASITMLAEEEGQLR---------PTRVLQMFNMVTPEELQDDDEYEEISEDIRDECSKYG 481
>gi|392589921|gb|EIW79251.1| hypothetical protein CONPUDRAFT_83522 [Coniophora puteana
RWD-64-598 SS2]
Length = 411
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 182/316 (57%), Gaps = 32/316 (10%)
Query: 210 IPGMFPNMFPLVTGQQFGALPVMPVQAMTQ------QATRHARRVYVGGLPPTANEQSVA 263
+PG P + G G P +PVQ +R +RR+Y+G + P NEQ++A
Sbjct: 11 LPGANRTQVPPILGIA-GLPPPIPVQTFGMGIGSNPNLSRQSRRLYIGSITPDVNEQNLA 69
Query: 264 TFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVK 323
FF+ M + T GPG+ V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K
Sbjct: 70 DFFNGKMIEMSIGTGGPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLK 129
Query: 324 VRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPD---RIFVGGLPYYFTEA 380
+RRP DY G + PN ++ V T PD +IFVGGLP Y E
Sbjct: 130 IRRPKDYG-------GDAIMAPNFHVPGVVST-------NVPDSIHKIFVGGLPPYLNEE 175
Query: 381 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 440
Q+ ELL+SFG L+ F+LV++ G SKG+AF Y D SVTD+A +LNG+++GD+ L V+
Sbjct: 176 QVMELLKSFGELKAFNLVRENGNGPSKGFAFFEYVDSSVTDVAIQSLNGMELGDRYLVVQ 235
Query: 441 RANQGANQPKPEQESVL--LHAQQQIALQRLMLQPG---SVPSKVVCLTQVVSADELKDD 495
RA+ GA KP ++ L Q + R ++ G + ++++ + +V+ D+L+DD
Sbjct: 236 RASVGA---KPGTPGMIPNLPYDQFPEIPRPIMPAGDGSTEDARILLMLNMVTVDDLQDD 292
Query: 496 EEYEEILEDMRQEGGK 511
+EY +I ED+++E K
Sbjct: 293 DEYGDIYEDVKEECSK 308
>gi|392572624|gb|EIW65769.1| hypothetical protein TREMEDRAFT_41238 [Tremella mesenterica DSM
1558]
Length = 596
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 160/277 (57%), Gaps = 27/277 (9%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R A+R+YVGG+ + + S+ FF+ M+ G PGD + V +NHEK FAF+E RS
Sbjct: 230 RQAKRIYVGGITESMTDASLLEFFNTTMSERGFTLEIPGDPIGAVQVNHEKAFAFLEFRS 289
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNP--SLAATLGPSQPNPNLNLAAVGLTPGSAG 360
EEAS+A+ LD ++FE P++V+RP DY L T+G G+
Sbjct: 290 AEEASSALKLDNVMFEDVPLRVKRPKDYTGLDPLQHTMG-----------------GAQA 332
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
+ P+++F+GGLP Y EAQ+ ELL+SFG LR F+LVKD ++ +KG+AF Y D S T
Sbjct: 333 MSDSPNKLFIGGLPTYLDEAQVMELLKSFGELRSFNLVKDPDSSENKGFAFAEYTDPSNT 392
Query: 421 DIACAALNGIKMGDKTLTVRRA----NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
D+A + LN +GD+ L V+RA G P ES L A+ I Q Q
Sbjct: 393 DMAISGLNNFSLGDRILVVQRAAVGRASGTTDAIPGSESFL--AKSAIFAQE--NQQSGP 448
Query: 477 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+V+ L +V+ADEL DD+EY+EILED+ E +F
Sbjct: 449 TSRVMLLLNMVTADELYDDQEYQEILEDITSECSRFG 485
>gi|402223467|gb|EJU03531.1| hypothetical protein DACRYDRAFT_77158 [Dacryopinax sp. DJM-731 SS1]
Length = 392
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 166/276 (60%), Gaps = 20/276 (7%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ ARR+Y+G + P E+++ F + + +G G V ++HEK +A++E +
Sbjct: 54 KQARRLYIGDITPDTTEENLTAFLKKTLPELGIKVEGEDVGFEEVRVSHEKNYAYIEFSN 113
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG--SAG 360
++A+ M LDG +F G P+K+RRP DY L+AT +L + G+ PG S
Sbjct: 114 PDDATKTMELDGTVFLGQPLKIRRPHDY---LSAT--------DLAVVFGGIVPGVVSTN 162
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
+ ++IFVGGLP Y EAQ+ ELL++FG LR F+LVKD TG SKG+AF Y D VT
Sbjct: 163 VPDSINKIFVGGLPTYLNEAQVMELLQTFGELRAFNLVKDGSTGVSKGFAFFEYMDPGVT 222
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP---GSVP 477
D+AC LNG+++GD+ L V+RA+ GAN KP ++ + R + P + P
Sbjct: 223 DVACQGLNGMELGDRYLVVQRASIGANPTKPNMPNM----PGTLPPPRPAILPVDNTNPP 278
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S ++ L +V+A+EL D++YE+ILED+R+E G+F
Sbjct: 279 SPILLLLNMVTAEELLQDQDYEDILEDVREEMGRFG 314
>gi|307195151|gb|EFN77144.1| Splicing factor U2AF 50 kDa subunit [Harpegnathos saltator]
Length = 402
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 183/316 (57%), Gaps = 42/316 (13%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 64 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 105
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 106 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 164
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ + P +IF+GGLP Y
Sbjct: 165 GQSLKIRRPHDYQPMPGMT-----DNPSMNVP------------DSPHKIFIGGLPNYLN 207
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 208 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 267
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 268 VQRASVGAKNPM-----IGTQAPVQIQVPGLSMVGSSGPATEVLCLLNMVTPEELMEEEE 322
Query: 498 YEEILEDMRQEGGKFA 513
YE+ILED+++E K+
Sbjct: 323 YEDILEDIKEECNKYG 338
>gi|389745686|gb|EIM86867.1| hypothetical protein STEHIDRAFT_57258 [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 170/297 (57%), Gaps = 24/297 (8%)
Query: 227 GALPVMPVQ------AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP 280
G P MPVQ + +R +RR+Y+G + P EQ++ FF+ M + T P
Sbjct: 39 GLPPPMPVQTFGMGMGVNPNLSRQSRRLYIGSITPDITEQNLTDFFNSKMIEMNIGTGAP 98
Query: 281 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGP 340
G V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K+RRP DY G
Sbjct: 99 GPPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFVNGPLKIRRPKDYG-------GM 151
Query: 341 SQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
P P L++ V S + P +IFVGGLP Y E Q+ ELL+SFG L+ F+LV++
Sbjct: 152 EMPAPPLHVPGVV----STNVPDSPHKIFVGGLPSYLNEEQVMELLKSFGDLKAFNLVRE 207
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
G SKG+AF Y D VTD+A +L+G+++GD+ L V+RA+ GA +P + L
Sbjct: 208 NGNGPSKGFAFFEYVDPEVTDVAIQSLSGMELGDRYLVVQRASVGAKAGQPGMPN--LPY 265
Query: 461 QQQIALQRLMLQPG-----SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
Q + R +L G S S+++ + +V+ ++L DD EY ++LED+R+E +
Sbjct: 266 DQFPEIPRPILPAGASDLSSANSRILLMLNMVTPEDLIDDSEYADLLEDIREEVANY 322
>gi|336368252|gb|EGN96595.1| hypothetical protein SERLA73DRAFT_93106 [Serpula lacrymans var.
lacrymans S7.3]
Length = 396
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 181/312 (58%), Gaps = 30/312 (9%)
Query: 210 IPGMFPNMFPLVTGQQFGALPVMPVQAMTQ------QATRHARRVYVGGLPPTANEQSVA 263
+PG P + G G P MPVQ +R +RR+Y+G + P NEQ++A
Sbjct: 11 LPGANRTQVPPILGIA-GLPPPMPVQTFGMGIGSNPNLSRQSRRLYIGSITPDVNEQNLA 69
Query: 264 TFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVK 323
FF+ M + T PG+ V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K
Sbjct: 70 DFFNSKMIEMSIGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLK 129
Query: 324 VRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQ 381
+RRP DY G P++++ V T P S +++FVGGLP Y E Q
Sbjct: 130 IRRPKDYG-------GVDMSAPSVHVPGVVSTNVPDSI------NKVFVGGLPTYLNEEQ 176
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
+ ELL+SFG L+ F+LV++ G SKG+AF Y D+SVTD+A +LNG+++GD+ L V+R
Sbjct: 177 VMELLKSFGELKAFNLVRENGNGPSKGFAFFEYVDISVTDVAIQSLNGMELGDRYLVVQR 236
Query: 442 ANQGANQPKPEQESVL--LHAQQQIALQRLMLQPG---SVPSKVVCLTQVVSADELKDDE 496
A+ GA KP ++ L Q + R ++ G S ++++ + +V+ D+L DD+
Sbjct: 237 ASVGA---KPGTPGMIPNLPYDQFPEIPRPIMPAGENSSADARILLMLNMVTPDDLTDDQ 293
Query: 497 EYEEILEDMRQE 508
EY ++ ED+++E
Sbjct: 294 EYGDLYEDVKEE 305
>gi|348526428|ref|XP_003450721.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 458
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 227/436 (52%), Gaps = 57/436 (13%)
Query: 87 DMDREKSRDREKDREKD-RHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDR 145
+ +R+ S +++ +R+K+ RHHR +RR D R + + + R R
Sbjct: 6 EFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERRHRRSR 65
Query: 146 EDRHKRRSQSRSRGRS-----EHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAA 200
+++ + + EH + + ++ + +I PA+A+L
Sbjct: 66 SPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQI-------PATALL--------- 109
Query: 201 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 260
P P + P P+V Q TR ARR+YVG +P E+
Sbjct: 110 ---PTMTPDGLAVTPTPVPVVGSQM----------------TRQARRLYVGNIPFGITEE 150
Query: 261 SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 320
S+ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G
Sbjct: 151 SMMDFFNAQM-RLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQ 209
Query: 321 PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 380
+K+RRP DY P + PS P + V P SA ++F+GGLP Y +
Sbjct: 210 SLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDD 260
Query: 381 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 440
Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D+++ D A A LNG+++GDK L V+
Sbjct: 261 QVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQ 320
Query: 441 RANQG---ANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEE 497
RA+ G A Q V L Q L + Q G +P++V+CL +V+ +EL DDEE
Sbjct: 321 RASVGSKNATLSSINQTPVTL---QVPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEE 377
Query: 498 YEEILEDMRQEGGKFA 513
YEEI+ED+R E K+
Sbjct: 378 YEEIVEDVRDECSKYG 393
>gi|426196755|gb|EKV46683.1| hypothetical protein AGABI2DRAFT_206147 [Agaricus bisporus var.
bisporus H97]
Length = 558
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 200/359 (55%), Gaps = 47/359 (13%)
Query: 174 KSKRISGFDMAPPA----SAMLAAGAGAAAAGQIPGAN-------PAIPGMFPNMFPLVT 222
+ ++ SG+D+ P SAM A G +PGAN +IPG+ P M
Sbjct: 133 RKRKASGWDVHAPGYEQYSAMQAKQTGLF---NLPGANRTQIPPILSIPGLPPPMPVQSF 189
Query: 223 GQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGD 282
G G P + +R +RR+Y+G + NEQ++A FF+ MA + T G+
Sbjct: 190 GMGIGGNPNL---------SRQSRRLYIGSITQEVNEQNLADFFNAKMAEMNIGTGITGN 240
Query: 283 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ 342
V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K+RRP DY G +
Sbjct: 241 PVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG-------GDTI 293
Query: 343 PNPNLNLAAVGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
+P +++ V T P S +++FVGGLP Y E Q+ ELL+SFG L+ F+LV++
Sbjct: 294 VSPGVHVPGVVSTNVPDSI------NKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRE 347
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL--L 458
TG SKG+AF Y D +VTD+A +LNG+++GD+ L V+RA+ GA KP ++ L
Sbjct: 348 NGTGTSKGFAFFEYVDQAVTDVAIQSLNGMELGDRYLVVQRASVGA---KPGTPGMIPNL 404
Query: 459 HAQQQIALQRLMLQPG----SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q + R ++ G S S+++ + +V+ ++L +D+EY ++ +D++ E K+
Sbjct: 405 PYDQFPEIPRPIMPAGKDQTSSESRILLMLNMVTPEDLHEDDEYGDLYDDVKAECSKYG 463
>gi|322792032|gb|EFZ16137.1| hypothetical protein SINV_12499 [Solenopsis invicta]
Length = 344
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 183/315 (58%), Gaps = 42/315 (13%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 6 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 47
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 48 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 106
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ + P +IF+GGLP Y
Sbjct: 107 GQSLKIRRPHDYQPMPGMT-----DNPSMNVP------------DSPHKIFIGGLPNYLN 149
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 150 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 209
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 210 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 264
Query: 498 YEEILEDMRQEGGKF 512
YE+ILED+++E K+
Sbjct: 265 YEDILEDIKEECNKY 279
>gi|336381013|gb|EGO22165.1| hypothetical protein SERLADRAFT_371639 [Serpula lacrymans var.
lacrymans S7.9]
Length = 381
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 173/290 (59%), Gaps = 29/290 (10%)
Query: 232 MPVQAMTQ------QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
MPVQ +R +RR+Y+G + P NEQ++A FF+ M + T PG+ V+
Sbjct: 1 MPVQTFGMGIGSNPNLSRQSRRLYIGSITPDVNEQNLADFFNSKMIEMSIGTGAPGNPVL 60
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
V N+EK +AFVE RS E+A+ AMA DGIIF P+K+RRP DY G P
Sbjct: 61 AVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG-------GVDMSAP 113
Query: 346 NLNLAAVGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
++++ V T P S +++FVGGLP Y E Q+ ELL+SFG L+ F+LV++
Sbjct: 114 SVHVPGVVSTNVPDSI------NKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGN 167
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL--LHAQ 461
G SKG+AF Y D+SVTD+A +LNG+++GD+ L V+RA+ GA KP ++ L
Sbjct: 168 GPSKGFAFFEYVDISVTDVAIQSLNGMELGDRYLVVQRASVGA---KPGTPGMIPNLPYD 224
Query: 462 QQIALQRLMLQPG---SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
Q + R ++ G S ++++ + +V+ D+L DD+EY ++ ED+++E
Sbjct: 225 QFPEIPRPIMPAGENSSADARILLMLNMVTPDDLTDDQEYGDLYEDVKEE 274
>gi|328862941|gb|EGG12041.1| hypothetical protein MELLADRAFT_41759 [Melampsora larici-populina
98AG31]
Length = 397
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/313 (39%), Positives = 173/313 (55%), Gaps = 38/313 (12%)
Query: 225 QFGALPVM---PVQ------AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 275
Q G+LP + P Q A TQ R ARR+YVG + TANE +VA FF+ M +G
Sbjct: 4 QGGSLPPIHFKPAQGQSGPVAQTQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGL 63
Query: 276 NTAGPGDA---------VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRR 326
D VV V +NHEK +AFVE R+ EEA++ M+ DGIIF+ +K+RR
Sbjct: 64 LVRNGEDGSMISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRR 123
Query: 327 PSDYNPSLAATLGPSQPNPNLNLAAVGLTPG--SAGGLEGPDRIFVGGLPYYFTEAQIRE 384
P DY G + N PG S + P++IF+GGLP Y T+ Q+ E
Sbjct: 124 PKDYT-------GTEHTSTNH-------IPGVVSTNVPDSPNKIFIGGLPSYLTDDQVME 169
Query: 385 LLESFGPLRGFDLVKDRETGN--SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
LL+SFG L+ F+LVKD +G SKG+AFC Y D +TDIAC LNG+++GD+ L V+RA
Sbjct: 170 LLKSFGELKSFNLVKDTSSGGQVSKGFAFCEYVDSDLTDIACQGLNGMELGDRYLVVQRA 229
Query: 443 NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP--SKVVCLTQVVSADELKDDEEYEE 500
G N K ++ + S +KV+ + +V+ +EL DDEEY+E
Sbjct: 230 QIGQNAKKEKENAEGAGGAGMGVGGFNGTNRASEGERTKVLQMLNMVNPEELVDDEEYKE 289
Query: 501 ILEDMRQEGGKFA 513
ILED+++E K+
Sbjct: 290 ILEDIKEECSKYG 302
>gi|403175591|ref|XP_003888994.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171670|gb|EHS64431.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 713
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 180/332 (54%), Gaps = 46/332 (13%)
Query: 209 AIPGMFPNM-FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS 267
+PG P + F GQ + PV A TQ R ARR+YVG + TANE +VA FF+
Sbjct: 306 GMPGSLPPIHFKPAQGQ---SGPV----AQTQSFARQARRLYVGNILHTANEMNVAEFFN 358
Query: 268 QVMAAIG----GNTAGPG-----DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
M +G N G + VV V +NHEK +AFVE R+ EEA++ M+ DGIIF+
Sbjct: 359 AKMKELGLLARNNEDGMAISISENPVVAVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQ 418
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
+K+RRP DY GP P V S + P++IF+GGLP Y T
Sbjct: 419 NQALKIRRPKDYT-------GPDHAGPTHIPGVV-----STNVPDSPNKIFIGGLPSYLT 466
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGN--SKGYAFCVYQDLSVTDIACAALNGIKMGDKT 436
+ Q+ ELL+SFG L+ F+LVKD +G SKG+AFC Y D +TDIAC LNG+++GD+
Sbjct: 467 DDQVMELLKSFGELKSFNLVKDTSSGGHVSKGFAFCEYVDPDLTDIACQGLNGMELGDRY 526
Query: 437 LTVRRANQGANQPKPE------------QESVLLHAQQQIALQRLMLQPGS---VPSKVV 481
L V+RA G N K + Q + Q A ++ S ++V+
Sbjct: 527 LVVQRAQIGQNAKKEKENNPDGQRNNYNQFNNFAGGQATAAASSVLAAVKSGEGEKTRVL 586
Query: 482 CLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ +V+ +EL DD+EY EILED+R E GK+
Sbjct: 587 QMLNMVNQEELVDDQEYGEILEDIRDECGKYG 618
>gi|350417886|ref|XP_003491628.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Bombus impatiens]
Length = 428
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 183/316 (57%), Gaps = 42/316 (13%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 90 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 131
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA DGI F+
Sbjct: 132 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFK 190
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ + P +IF+GGLP Y
Sbjct: 191 GQSLKIRRPHDYQPMPGMT-----DNPSMNVP------------DSPHKIFIGGLPNYLN 233
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 234 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 293
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 294 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 348
Query: 498 YEEILEDMRQEGGKFA 513
YE+ILED+++E K+
Sbjct: 349 YEDILEDIKEECNKYG 364
>gi|66520699|ref|XP_623055.1| PREDICTED: splicing factor U2AF 50 kDa subunit [Apis mellifera]
Length = 432
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 185/316 (58%), Gaps = 38/316 (12%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 90 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 131
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA D I F+
Sbjct: 132 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDSINFK 190
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ PG+ + P +IF+GGLP Y
Sbjct: 191 GQSLKIRRPHDYQPMPGMT-----DNPSMNV------PGTVP--DSPHKIFIGGLPNYLN 237
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 238 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 297
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 298 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 352
Query: 498 YEEILEDMRQEGGKFA 513
YE+ILED+++E K+
Sbjct: 353 YEDILEDIKEECNKYG 368
>gi|341891946|gb|EGT47881.1| hypothetical protein CAEBREN_25972 [Caenorhabditis brenneri]
Length = 491
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 166/274 (60%), Gaps = 19/274 (6%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
T +RR+YVG +P NE+++ FF+Q M G A PG+ ++ IN +K FAF+E
Sbjct: 174 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQA-PGNPILLCQINLDKNFAFIEF 232
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAG 360
RS++E + MA DGI F G +KVRRP DY PSQ ++N P S+
Sbjct: 233 RSIDETTAGMAFDGINFMGQQLKVRRPRDYQ--------PSQNTFDMN----SRMPVSSI 280
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
++ ++IF+GGLP Y TE Q++ELL SFGPL+ F L D + GNSKGYAF Y D ++T
Sbjct: 281 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLT 339
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKV 480
D A A LNG+++GDK L V+ A ANQ + + L ++ IA L G ++V
Sbjct: 340 DQAIAGLNGMQLGDKQLVVQLA--CANQTR--HNTHLPNSASAIAGIDLSQGAGRA-TEV 394
Query: 481 VCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
+CL +V+ DELK DE+YEEILED+R+E K+
Sbjct: 395 LCLMNMVTEDELKSDEDYEEILEDVREECSKYGI 428
>gi|392565476|gb|EIW58653.1| hypothetical protein TRAVEDRAFT_37512 [Trametes versicolor
FP-101664 SS1]
Length = 548
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 205/379 (54%), Gaps = 54/379 (14%)
Query: 158 RGRSEHRSRSRSRSRSKSKR---ISGFDMAPPA----SAMLAAGAGAAAAGQIPGAN--- 207
R + RS + S + S+R SG+D+ P +AM A G +PGAN
Sbjct: 100 RVMTTRRSPTPSDATPLSQRKRKASGWDVHAPGYEQYTAMQAKQTGLF---NLPGANRTQ 156
Query: 208 ----PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVA 263
AIPG+ P M G G P +R +RR+Y+G + P NEQ++
Sbjct: 157 IPPILAIPGLPPPMPVNTFGMGTGVNP---------NLSRQSRRLYIGSITPDINEQNLT 207
Query: 264 TFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVK 323
FF+ M + T PG+ V+ V N+EK +AFVE RS E+A+ AMA DGIIF P+K
Sbjct: 208 DFFNSKMKEMNLGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLK 267
Query: 324 VRRPSDY-NPSLAATLGPSQPNPNLNLAAVGLT--PGSAGGLEGPDRIFVGGLPYYFTEA 380
+RRP DY P + A N+++ V T P SA ++IFVGGLP Y E
Sbjct: 268 IRRPKDYGGPDMLA---------NMHVPGVVSTNVPDSA------NKIFVGGLPTYLNEE 312
Query: 381 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 440
Q+ ELL SFG L+ F+LV++ G SKG+AF Y D SVTD+A +L+G+++GDK L V+
Sbjct: 313 QVMELLSSFGELKAFNLVRENGNGPSKGFAFFEYVDPSVTDVAIPSLSGMELGDKYLVVQ 372
Query: 441 RANQGANQPKPEQESVLLHAQQQIA--LQRLMLQPG-----SVPSKVVCLTQVVSADELK 493
RA+ GA KP Q + +A + + ++ G ++ +++ + +V +EL
Sbjct: 373 RASVGA---KPGQSPIPGMGMFDMAPEIPKPIMPVGERDLEAMQDRILLMLNMVVPEELS 429
Query: 494 DDEEYEEILEDMRQEGGKF 512
DD+EY ++ ED+++E K+
Sbjct: 430 DDQEYGDLYEDVKEECEKY 448
>gi|71996485|ref|NP_001022969.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
gi|351018336|emb|CCD62280.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
Length = 474
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 164/274 (59%), Gaps = 19/274 (6%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
T +RR+YVG +P NE+++ FF+Q M G A PG+ ++ IN +K FAF+E
Sbjct: 157 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQA-PGNPILLCQINLDKNFAFIEF 215
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAG 360
RS++E + MA DGI F G +KVRRP DY PSQ ++N P S
Sbjct: 216 RSIDETTAGMAFDGINFMGQQLKVRRPRDYQ--------PSQNTFDMN----SRMPVSTI 263
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
++ ++IF+GGLP Y TE Q++ELL SFGPL+ F L D + GNSKGYAF Y D ++T
Sbjct: 264 VVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLT 322
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKV 480
D A A LNG+++GDK L V+ A ANQ + + L ++ IA L G +++
Sbjct: 323 DQAIAGLNGMQLGDKQLVVQLA--CANQQR--HNTNLPNSASAIAGIDLSQGAGRA-TEI 377
Query: 481 VCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
+CL +V+ DELK D+EYEEILED+R E K+
Sbjct: 378 LCLMNMVTEDELKADDEYEEILEDVRDECSKYGI 411
>gi|380016747|ref|XP_003692335.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Apis florea]
Length = 428
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 182/315 (57%), Gaps = 42/315 (13%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP AN +V A+PV+ TR ARR+YVG +P
Sbjct: 90 AAGQIP-AN------------IVADTPQAAVPVV-----GSTITRQARRLYVGNIPFGVT 131
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+ + FF+Q M + G G+ V+ IN +K FAF+E RS++E + AMA D I F+
Sbjct: 132 EEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDSINFK 190
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ + P +IF+GGLP Y
Sbjct: 191 GQSLKIRRPHDYQPMPGMT-----DNPSMNVP------------DSPHKIFIGGLPNYLN 233
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 234 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 293
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 294 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 348
Query: 498 YEEILEDMRQEGGKF 512
YE+ILED+++E K+
Sbjct: 349 YEDILEDIKEECNKY 363
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 185/341 (54%), Gaps = 47/341 (13%)
Query: 205 GANPAIPGMFPNMFPLVTGQQFGALPV------------MPV--QAMTQQATRHARRVYV 250
G P+ + P + VT QQ+ A+ MP A TR ARR+YV
Sbjct: 47 GRTPSAWDIPPEGYEQVTPQQYKAMQASGQIASRIAPDSMPTGESAAIAMITRQARRLYV 106
Query: 251 GGLPPTANEQSVATFFSQVMAAIG--GNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASN 308
G +P E+ + FF+Q + A+G G G AV+ N EK FAF+E RS++EA+
Sbjct: 107 GNIPFGVTEEEMMEFFNQQLMALGLEGAQYLDGKAVLTCQTNLEKNFAFLEFRSMDEATQ 166
Query: 309 AMALDGIIFEGAPVKVRRPSDYNPS---------------LAATLGPSQPNPNLNLAAVG 353
A+ DGIIF G +K+RRP DY P L AT + NP ++ AV
Sbjct: 167 ALNFDGIIFRGQILKIRRPHDYQPVPSIRVSNMESYRSFRLPAT---TTTNPPISTIAVS 223
Query: 354 -LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
+ P S P++I+VGGLP + QI++LL+SFG L+G +LVKD T SKG+AF
Sbjct: 224 SIVPDS------PNKIYVGGLPTCLDQDQIKDLLQSFGELKGLNLVKDINTSLSKGFAFF 277
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQ 472
Y D SVTD A A L+G+++GD+ L V+R+ G Q+ ++ Q+ +L
Sbjct: 278 EYIDPSVTDHAIAGLHGMQLGDRRLVVQRSIPGGKNGLSVQQPIV-----QVPGISTLLD 332
Query: 473 PGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
PGS P++++CL +V +EL D+EE+E+I D++QE K+
Sbjct: 333 PGS-PTEILCLLNMVLPEELLDNEEFEDIRSDIKQECAKYG 372
>gi|299745153|ref|XP_001831503.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|298406457|gb|EAU90350.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 550
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 165/274 (60%), Gaps = 17/274 (6%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R +RR+Y+G + P NEQ++A FF++ MA + T G+ V+ V N+EK +AFVE R
Sbjct: 192 SRQSRRLYIGSITPDVNEQNLAEFFNKKMAEMNIGTGSTGNPVLAVQCNYEKNYAFVEFR 251
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
S ++A+ AMA DGIIF P+K+RRP DY + P ++ A P S
Sbjct: 252 SADDATAAMAFDGIIFINGPLKIRRPKDYGGEVVT----GSPGIHVPGAVSTNVPDSI-- 305
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+++FVGGLP Y E Q+ ELL+SFG L+ F+LV++ G SKG+AF Y D SVTD
Sbjct: 306 ----NKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGNGPSKGFAFFEYVDSSVTD 361
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS--VPSK 479
+A +LNG+++GD+ L V+RA+ GA P L Q + R ++ G+ ++
Sbjct: 362 VAIQSLNGMELGDRYLVVQRASVGAKPGAPG-----LPYDQFPDIPRPIMPAGAEVTDAR 416
Query: 480 VVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++ + +V+ D+L DDEEY ++ ED+++E K+
Sbjct: 417 ILLMLNMVTPDDLIDDEEYGDLYEDVKEECSKYG 450
>gi|331243454|ref|XP_003334370.1| splicing factor U2AF subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 600
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 169/304 (55%), Gaps = 38/304 (12%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIG----GNTAGPG-----DAVVN 286
A TQ R ARR+YVG + TANE +VA FF+ M +G N G + VV
Sbjct: 214 AQTQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVA 273
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 346
V +NHEK +AFVE R+ EEA++ M+ DGIIF+ +K+RRP DY GP P
Sbjct: 274 VQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYT-------GPDHAGPT 326
Query: 347 LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN- 405
V S + P++IF+GGLP Y T+ Q+ ELL+SFG L+ F+LVKD +G
Sbjct: 327 HIPGVV-----STNVPDSPNKIFIGGLPSYLTDDQVMELLKSFGELKSFNLVKDTSSGGH 381
Query: 406 -SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE------------ 452
SKG+AFC Y D +TDIAC LNG+++GD+ L V+RA G N K +
Sbjct: 382 VSKGFAFCEYVDPDLTDIACQGLNGMELGDRYLVVQRAQIGQNAKKEKENNPDGQRNNYN 441
Query: 453 QESVLLHAQQQIALQRLMLQPGS---VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
Q + Q A ++ S ++V+ + +V+ +EL DD+EY EILED+R E
Sbjct: 442 QFNNFAGGQATAAASSVLAAVKSGEGEKTRVLQMLNMVNQEELVDDQEYGEILEDIRDEC 501
Query: 510 GKFA 513
GK+
Sbjct: 502 GKYG 505
>gi|260800970|ref|XP_002595369.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
gi|229280615|gb|EEN51381.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
Length = 524
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 176/290 (60%), Gaps = 31/290 (10%)
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVM--AAIGGNTAGPGDAVVNVYI 289
MP+ + Q TR ARR+YVG +P E+++ FF+ M A++ PG+ V+ +
Sbjct: 191 MPIGS---QMTRQARRLYVGNIPFGVTEEAMIDFFNTQMHRASL---AQAPGNPVLACQV 244
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P NP++++
Sbjct: 245 NLDKNFAFLEFRSVDETTLAMAFDGIIFQGQSLKLRRPHDYQPVPGMA-----ENPDIHV 299
Query: 350 -AAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 406
+ PG + + P +IF+GGLP Y + Q++ELL SFG L+ F+LVKD T S
Sbjct: 300 PGGFPVIPGVVSTVVQDSPHKIFIGGLPNYLNDDQVKELLLSFGQLKAFNLVKDSSTALS 359
Query: 407 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA----NQPKPEQESVLLHAQQ 462
KGYAFC Y D +VTD A A LNG+++GDK L V+RA+ GA NQP Q
Sbjct: 360 KGYAFCEYVDPNVTDQAIAGLNGMQLGDKKLIVQRASVGAKNAQNQP----------VQL 409
Query: 463 QIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
QI L G P++V+CL +V +EL D+EEYE+ILED+R+E GK+
Sbjct: 410 QIPGLTLTGNAGP-PTEVLCLMNMVMPEELMDEEEYEDILEDVREECGKY 458
>gi|195124159|ref|XP_002006561.1| GI21125 [Drosophila mojavensis]
gi|193911629|gb|EDW10496.1| GI21125 [Drosophila mojavensis]
Length = 427
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 161/277 (58%), Gaps = 6/277 (2%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A TR ARR+YVG +P + ++ + FF++ + + G G+AV+ N +K F
Sbjct: 91 AAIATVTRQARRLYVGNIPFSTTDEDMMAFFNEQINRLNGTNGVDGNAVLTCQTNLDKNF 150
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AF+E RS++EA+ A+ DGI++ G +K+RRP DY+P + + + + V
Sbjct: 151 AFLEFRSMDEATQAINFDGILYRGQTLKIRRPHDYHPMASVSSSEAADAAKGSATHVNSV 210
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
P S + P +I+VGGLP E Q++ELL +FG LRGF+LVK+ TG SKG+AFC Y
Sbjct: 211 PISPMVPDSPHKIYVGGLPTCLNEEQVKELLVTFGKLRGFNLVKEAVTGQSKGFAFCEYV 270
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS 475
D +T+ A A LNG+++GD+ L V+R+ G Q VL Q+ + + G
Sbjct: 271 DPCITEQAIAGLNGMQLGDRKLIVQRSIAGVRNLVANQLPVL-----QVPGFPVDVSTGK 325
Query: 476 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++V+CL +V EL DD+EY++I D++QE K+
Sbjct: 326 A-TEVLCLLNMVLPSELTDDDEYDDIRTDIKQECAKY 361
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 165/293 (56%), Gaps = 37/293 (12%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A TR ARR+YVG +P + ++ + FF++ + + G G+AV+ N +K F
Sbjct: 91 AAIATVTRQARRLYVGNIPFSTTDEDMMAFFNEQIHRLNGTQGHDGNAVLTCQTNLDKNF 150
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL--------GPSQPNPNL 347
AF+E RS++EA+ A+ DGI + G +K+RRP DY+P + T G +Q + +
Sbjct: 151 AFLEFRSMDEATQAITFDGISYRGQTLKIRRPHDYHPVASITTAEIVEIAKGATQIHAS- 209
Query: 348 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
NL + P S P +I++GGLP E Q++ELL +FG LRGF+LVKD TG SK
Sbjct: 210 NLPISPVVPDS------PHKIYIGGLPTCLNEEQVKELLVTFGQLRGFNLVKDTITGQSK 263
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
G+AFC Y D S+T+ A A LNG+++GD+ L V+R+ G + +A Q
Sbjct: 264 GFAFCEYLDPSITEQAIAGLNGMQLGDRKLVVQRSIAG--------------VRNMVASQ 309
Query: 468 RLMLQPGSVP--------SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+LQ P ++V+CL +V EL D++EYE+I D++QE K+
Sbjct: 310 LPVLQVPGFPIDVSTCKATEVLCLLNMVLPSELLDNDEYEDIRTDIKQECAKY 362
>gi|339243511|ref|XP_003377681.1| splicing factor U2AFsubunit [Trichinella spiralis]
gi|316973494|gb|EFV57074.1| splicing factor U2AFsubunit [Trichinella spiralis]
Length = 402
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 167/276 (60%), Gaps = 25/276 (9%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
T +RR+YVG +P E+++ FF+Q M G A G+ ++ IN +K FAF+E
Sbjct: 83 VTCQSRRLYVGNIPFGCTEEAMMDFFNQQMHLCGLAQA-LGNPILACQINLDKNFAFIEF 141
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAG 360
RS+ E + AMA DGI ++G +K+RRP DY QP P N GL S+
Sbjct: 142 RSIAETTAAMAFDGINYQGQSLKIRRPRDY-----------QPLPGQNDTLAGLV--SSV 188
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
+ P ++F+GGLP Y +E Q++ELL SFG L+ F+L+KD T SKGYAF Y D ++T
Sbjct: 189 VADSPYKLFIGGLPNYLSEEQVKELLISFGQLKAFNLIKDPATQISKGYAFAEYSDSTLT 248
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ---RLMLQPGSVP 477
D A A LNG+++GDK L V+ A+ GA ++ + A +A+Q ++ P + P
Sbjct: 249 DQAIAGLNGMQLGDKKLVVQLASVGA-------KNNMFSAAAPVAIQVPGMNVVNPAATP 301
Query: 478 -SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++++CL +V A+EL D+EEY++I+ED+++E K+
Sbjct: 302 ATEILCLMNMVVAEELVDNEEYDDIVEDIKEECCKY 337
>gi|443731660|gb|ELU16702.1| hypothetical protein CAPTEDRAFT_155651 [Capitella teleta]
Length = 480
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 172/276 (62%), Gaps = 18/276 (6%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R ARR+YVG +P E+ + FF+ M + + G+ V+ +N +K FAF+E R
Sbjct: 157 SRQARRLYVGNIPFGVTEEMMMDFFNTQMK-MAALSQAEGNPVIACQVNLDKNFAFLEYR 215
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
SV+E ++AMALDGI F+G +K+RRP DY P P N+A G+ S
Sbjct: 216 SVDETTHAMALDGINFQGQSLKIRRPKDYQPLPGIAETP-------NVAVPGVV--STVV 266
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ +IF+GGLP Y E Q++ELL SFGPL+ F LVKD TG SKGYAFC Y D+S+TD
Sbjct: 267 QDSAHKIFIGGLPNYLNEDQVKELLTSFGPLKAFSLVKDSATGLSKGYAFCEYLDISITD 326
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV---PS 478
ACA LNG+++GDK L V+RA+ GA + +++ A Q+ + L + P + +
Sbjct: 327 QACAGLNGMQLGDKKLIVQRASVGA-----KNAAIISSAPMQMQIPGLAVNPMAAAGPAT 381
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
+V+CL +V +EL+D+EEYE+ILED+++E K+ F
Sbjct: 382 EVLCLMNMVLPEELEDEEEYEDILEDVKEECSKYGF 417
>gi|443924699|gb|ELU43686.1| rRNA primary transcript binding protein [Rhizoctonia solani AG-1
IA]
Length = 678
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 180/323 (55%), Gaps = 35/323 (10%)
Query: 203 IPGAN-----PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTA 257
+PGAN P I GM + P+ GQ A P + A R +RR+YVG + A
Sbjct: 193 LPGANRTQVVPTIMGMSSALPPIHYGQGSFA----PGTGVPNLA-RQSRRLYVGNITYEA 247
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
NE ++ FF++ M + T G GD V+ V INHEK +AFVE RS E+A+ AMA DGI+F
Sbjct: 248 NENNLQEFFNRKMVEMKIGTGGGGDPVIGVQINHEKSYAFVEFRSAEDATAAMAFDGIMF 307
Query: 318 EGAPVKVRRPSDYNPS-LAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYY 376
+ P+K+RRP DY S L+A +G P G+ S + ++IFVGGLP Y
Sbjct: 308 QSGPLKIRRPKDYTGSDLSAPMGVHVP---------GVV--STNVPDSINKIFVGGLPTY 356
Query: 377 FTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC-VYQDLSVTDIACAALNGIKMGDK 435
E Q+ ELL+SFG L+ F+LV RE GN C VY D SVTDIA LNG+++GD+
Sbjct: 357 LDENQVMELLKSFGELKAFNLV--RENGNGAFRRDCQVYVDPSVTDIAIQGLNGMELGDR 414
Query: 436 TLTVRRANQGANQPKPEQESVLLHAQQQIALQRLML------QPGSVPSKVVCLTQVVSA 489
L V+RA+ GA P L A+ R ++ P S ++ L +V+
Sbjct: 415 FLVVQRASVGAKSGIPGVPPELFAP----AIPRPIMPITETADPNPSDSTILLLLNMVAP 470
Query: 490 DELKDDEEYEEILEDMRQEGGKF 512
++L DD EY EI+ED+R+E KF
Sbjct: 471 EDLTDDGEYTEIVEDVREECSKF 493
>gi|302685922|ref|XP_003032641.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
gi|300106335|gb|EFI97738.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
Length = 556
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 172/281 (61%), Gaps = 30/281 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG---PGDAVVNVYINHEKKFAFV 298
+R +RR+Y+G + P NE ++A FF+ M + T G P V+ V N+EK +AFV
Sbjct: 190 SRQSRRLYIGSITPEINEHNLAEFFNSKMTEMNIGTGGPGNP---VLAVQCNYEKNYAFV 246
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT--P 356
E RS ++A+ AMA DGIIF P+K+RRP DY+ S+A+ P +++ + T P
Sbjct: 247 EFRSADDATAAMAFDGIIFLNGPLKIRRPKDYDISVASA-------PMIHVPGIISTNVP 299
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK-GYAFCVYQ 415
SA ++IFVGGLP Y E Q++ELL SFG L+ F+LV++ TG SK GYAF Y
Sbjct: 300 DSA------NKIFVGGLPAYLNEEQVQELLTSFGELKAFNLVRETGTGASKQGYAFFEYV 353
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPG- 474
D +VTD+A +LNG+++GD+ L V+RA+ GA L A+ A+ + ++ G
Sbjct: 354 DPNVTDVAIQSLNGMELGDRFLVVQRASVGAKDGTIPN----LPAELMPAIPKPIMPAGQ 409
Query: 475 ---SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
S ++V+ + +V+ D+L DD+EY ++LED+++E KF
Sbjct: 410 TDTSGDARVLLMLNMVTPDDLVDDDEYGDLLEDIKEECSKF 450
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 15/287 (5%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIG--GNTAGPGDAVVNVYINHEK 293
A TR ARR+YVG +P E+ + FF+Q + A+G G G AV+ N EK
Sbjct: 95 AAIAMITRQARRLYVGNIPFGVTEEEMMKFFNQQLLALGLAGAQYMDGKAVLTCQTNLEK 154
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ-------PNPN 346
FAF+E RS++EA+ A+ DGI+F G +K+RRP DY P + + + P+
Sbjct: 155 NFAFLEFRSMDEATQALNFDGILFRGQVLKIRRPHDYQPVPSIRVSAMESYRSFRLPDNT 214
Query: 347 LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 406
+ + P S+ + P++IFVGGLP + QIR+LL+SFG L+ +LVKD T S
Sbjct: 215 VTHPPLATIPLSSIVPDSPNKIFVGGLPTCLGQDQIRDLLQSFGELKRLNLVKDTNTCLS 274
Query: 407 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIAL 466
KG+AF Y D +VTD A A L+G+++G++ L V+R+ G Q+ ++ Q+
Sbjct: 275 KGFAFFEYFDPTVTDHAIAGLHGMQLGNRRLVVQRSIPGGKHAVSGQQPLV-----QVPG 329
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+L PGS P++++CL +V +EL D+EE+E+I D+ QE K+
Sbjct: 330 ISTLLDPGS-PTEIICLLNMVLPEELLDNEEFEDIRTDIEQECAKYG 375
>gi|297706019|ref|XP_002829852.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pongo abelii]
Length = 352
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 158/256 (61%), Gaps = 10/256 (3%)
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
++++ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+
Sbjct: 74 KEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQ 132
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P + PS P + V P SA ++F+GGLP Y
Sbjct: 133 GQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLN 183
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
+ Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L
Sbjct: 184 DDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLL 243
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEY 498
V+RA+ GA + Q L +Q G P++V+CL +V +EL DDEEY
Sbjct: 244 VQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEY 303
Query: 499 EEILEDMRQEGGKFAF 514
EEI+ED+R E K+
Sbjct: 304 EEIVEDVRDECSKYGL 319
>gi|384246661|gb|EIE20150.1| hypothetical protein COCSUDRAFT_30785 [Coccomyxa subellipsoidea
C-169]
Length = 212
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 138/204 (67%), Gaps = 3/204 (1%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
A R ARR+YVGGLPP + + + +++M + GG A G + + I EK +AF+E
Sbjct: 6 AARPARRIYVGGLPPETTDADLRQYINELMVSTGG-CAATGYPIASCKIYTEKSYAFLEF 64
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAG 360
RSVEEASN MA DG+ F+ + ++VRRP++Y+ ++A LGP+ P+P ++++ + +
Sbjct: 65 RSVEEASNCMAFDGVAFKDSYLRVRRPNNYDINVAVMLGPTDPDPTMDVSNLDIVKTVVQ 124
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
+ P ++F+GGLP +TE Q++ELL FG L+ F+LV D+ TGNSKGYAFC YQD+ +T
Sbjct: 125 --DSPHKLFIGGLPCDWTEDQVKELLLPFGSLKAFNLVMDKNTGNSKGYAFCEYQDIGLT 182
Query: 421 DIACAALNGIKMGDKTLTVRRANQ 444
D LNG ++G+K LTV+RA Q
Sbjct: 183 DYVIQNLNGKQIGNKFLTVKRALQ 206
>gi|299470773|emb|CBN79819.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 636
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 139/211 (65%), Gaps = 16/211 (7%)
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP--GDAVVNVYINHEKKF 295
+ Q TRHARR+Y+GG P T E+ +++FF++V I P G AV +VY++ EK F
Sbjct: 239 SNQQTRHARRLYIGGCPKT-TEEEMSSFFNEV---INRALEYPIDGGAVASVYVSQEKAF 294
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
AF+E++++E A++ + LDGI+++ +K+RRPSDYNP L S P P LNL+ +G+
Sbjct: 295 AFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVP--AASGPIPKLNLSVLGII 352
Query: 356 PGSAGGLEGPD---RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
+ PD ++F+GGLPY TE Q+RELL +FGPL+ F LV+D + SKGY FC
Sbjct: 353 SSTV-----PDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFC 407
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTVRRAN 443
Y + VT IAC L+G+ +GDKTLTVR A
Sbjct: 408 EYLNAGVTAIACEGLHGMTLGDKTLTVRPAT 438
>gi|405976087|gb|EKC40607.1| Splicing factor U2AF 50 kDa subunit [Crassostrea gigas]
Length = 428
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 146/247 (59%), Gaps = 20/247 (8%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R ARR+YVG +P E+++ FF+ M G A G V+ V IN +K FAF+E R
Sbjct: 111 SRQARRLYVGNIPFGVTEEAMMDFFNHQMKMTGLAQA-EGSPVIAVQINLDKNFAFLEFR 169
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
SV+E + AMA DGI F+G +K+RRP DY P PS P + V
Sbjct: 170 SVDETTQAMAFDGINFQGQSLKIRRPRDYQPLPGMAETPSVNVPGVVSTVVQ-------- 221
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ P +IF+GGLP Y E Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D +VTD
Sbjct: 222 -DSPHKIFIGGLPNYLNEDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDPNVTD 280
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS-VPSKV 480
CA LNG+++GDK L V+RA+ GA K Q V Q+ + L L G+ P++V
Sbjct: 281 QGCAGLNGMQLGDKKLIVQRASLGA---KNSQVPV------QLQIPGLNLNQGAGPPTEV 331
Query: 481 VCLTQVV 487
+CL ++
Sbjct: 332 LCLMNMI 338
>gi|409081516|gb|EKM81875.1| hypothetical protein AGABI1DRAFT_70425 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 375
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 175/296 (59%), Gaps = 30/296 (10%)
Query: 232 MPVQAMTQ------QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
MPVQ+ +R +RR+Y+G + NEQ++A FF+ MA + T G+ V+
Sbjct: 1 MPVQSFGMGIGGNPNLSRQSRRLYIGSITQEVNEQNLADFFNAKMAEMNIGTGITGNPVL 60
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
V N+EK +AFVE RS E+A+ AMA DGIIF P+K+RRP DY G + +P
Sbjct: 61 AVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG-------GDTIVSP 113
Query: 346 NLNLAAVGLT--PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
+++ V T P S +++FVGGLP Y E Q+ ELL+SFG L+ F+LV++ T
Sbjct: 114 GVHVPGVVSTNVPDSI------NKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGT 167
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL--LHAQ 461
G SKG+AF Y D +VTD+A +LNG+++GD+ L V+RA+ GA KP ++ L
Sbjct: 168 GTSKGFAFFEYVDQAVTDVAIQSLNGMELGDRYLVVQRASVGA---KPGTPGMIPNLPYD 224
Query: 462 QQIALQRLMLQPG----SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q + R ++ G S S+++ + +V+ ++L +D+EY ++ +D++ E K+
Sbjct: 225 QFPEIPRPIMPAGKDQTSSESRILLMLNMVTPEDLHEDDEYGDLYDDVKAECSKYG 280
>gi|358059688|dbj|GAA94557.1| hypothetical protein E5Q_01209 [Mixia osmundae IAM 14324]
Length = 564
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 168/304 (55%), Gaps = 25/304 (8%)
Query: 221 VTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT--- 277
++G A P+ VQ + A R RR+YVG + PTA+EQ+V FF+ M G +
Sbjct: 205 MSGAGSAAAPMGGVQPIISFA-RQQRRLYVGNIMPTADEQNVTEFFNAKMRENGLSLDDK 263
Query: 278 ---AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSL 334
D VV+V +NHEK +AFVE RS EEAS+AM+ DGI+F+ +K+RRP DY
Sbjct: 264 KVDVQTADPVVSVQVNHEKSYAFVEFRSPEEASSAMSFDGIVFQDQQLKIRRPKDYT--- 320
Query: 335 AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 394
G +L P + P+++FVGGLP Y + Q+ ELL SFG LR
Sbjct: 321 ----GDESGGTHLPGVISSNVPDT------PNKVFVGGLPSYLDDEQVLELLSSFGELRS 370
Query: 395 FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE-- 452
F+LVK+ SKG+AFC Y D +VTD ACA LNG+++GD+ L V+RA GAN K
Sbjct: 371 FNLVKEGPQNASKGFAFCEYADPNVTDAACAGLNGMEIGDRYLVVQRAQVGANVYKHPGG 430
Query: 453 ---QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
L A ++A + ++ + + +V+ +EL DD++Y +I ED++ E
Sbjct: 431 YGGSNPALPPALARVAPTIFGQDETAPATRCLQMLNMVTPEELVDDQDYADINEDIKDEC 490
Query: 510 GKFA 513
K+
Sbjct: 491 SKYG 494
>gi|340780291|pdb|2YH0|A Chain A, Solution Structure Of The Closed Conformation Of Human
U2af65 Tandem Rrm1 And Rrm2 Domains
gi|340780292|pdb|2YH1|A Chain A, Model Of Human U2af65 Tandem Rrm1 And Rrm2 Domains With
Eight-Site Uridine Binding
Length = 198
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 133/202 (65%), Gaps = 10/202 (4%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+
Sbjct: 4 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 62
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
E + AMA DGIIF+G +K+RRP DY P + PS P + V P SA
Sbjct: 63 ETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA----- 114
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A
Sbjct: 115 -HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAI 173
Query: 425 AALNGIKMGDKTLTVRRANQGA 446
A LNG+++GDK L V+RA+ GA
Sbjct: 174 AGLNGMQLGDKKLLVQRASVGA 195
>gi|410054709|ref|XP_003954504.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa subunit
[Pan troglodytes]
Length = 394
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 157/255 (61%), Gaps = 10/255 (3%)
Query: 260 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 319
+++ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G
Sbjct: 86 EAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQG 144
Query: 320 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 379
+K+RRP DY P + PS P + V P SA ++F+GGLP Y +
Sbjct: 145 QSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLND 195
Query: 380 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V
Sbjct: 196 DQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLV 255
Query: 440 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE 499
+RA+ GA + Q L +Q G P++V+CL +V +EL DDEEYE
Sbjct: 256 QRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYE 315
Query: 500 EILEDMRQEGGKFAF 514
EI+ED+R E K+
Sbjct: 316 EIVEDVRDECSKYGL 330
>gi|13938661|gb|AAH07487.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Mus
musculus]
Length = 306
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 150/242 (61%), Gaps = 9/242 (3%)
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 10 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 69
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 70 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 120
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 121 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 180
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 181 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 240
Query: 513 AF 514
Sbjct: 241 GL 242
>gi|76779874|gb|AAI06135.1| U2af2 protein [Mus musculus]
Length = 307
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 150/242 (61%), Gaps = 9/242 (3%)
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 11 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 70
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 71 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 121
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 122 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 181
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 182 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 241
Query: 513 AF 514
Sbjct: 242 GL 243
>gi|50882018|gb|AAT85577.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit
[Alvinella pompejana]
Length = 479
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 184/326 (56%), Gaps = 24/326 (7%)
Query: 198 AAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT------QQATRHARRVYVG 251
A G P A PGM P + P++ A P P+ T +R ARR+YVG
Sbjct: 106 ALHGLGPPGGLAAPGM-PVVAPVIAANNVVASPTAPMALNTTIPFAGSAISRQARRLYVG 164
Query: 252 GLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA 311
+P E+ + +F+ M + G G+ V+ ++N +K FAF+E RSV+E + AMA
Sbjct: 165 NIPFGVTEEMMMDYFNTQMK-MAGLAQAEGNPVIACHVNLDKNFAFLEFRSVDETTQAMA 223
Query: 312 LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVG 371
DGI F+G +K+RRP DY P PS P + V + +IF+G
Sbjct: 224 FDGINFQGQSLKIRRPKDYQPLPGMAEVPSVAVPGVVSTVVQ---------DSAHKIFIG 274
Query: 372 GLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIK 431
GLP Y E Q++ELL SFG L+ F+LVKD TG SKGYAFC Y D S+TD ACA LNG++
Sbjct: 275 GLPNYLNEDQVKELLTSFGLLKAFNLVKDSATGLSKGYAFCEYLDPSITDQACAGLNGMQ 334
Query: 432 MGDKTLTVRRANQGAN--QPKPEQESVLLHAQQQI-ALQRLMLQPGSVPSKVVCLTQVVS 488
+GD+ L V+RA+ GA Q P +L Q QI L +Q ++V+CL +V+
Sbjct: 335 LGDEKLIVQRASVGAKNAQGGPN----VLPVQLQIPGLNMAQVQGPGPTTEVLCLMNMVT 390
Query: 489 ADELKDDEEYEEILEDMRQEGGKFAF 514
++L+D+EEYEEILED+++E K+ +
Sbjct: 391 PEDLEDEEEYEEILEDVKEECSKYGY 416
>gi|355727237|gb|AES09128.1| U2 small nuclear RNA auxiliary factor 2 [Mustela putorius furo]
Length = 301
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 153/269 (56%), Gaps = 24/269 (8%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 53 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 111
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 112 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 161
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 162 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 221
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
+ PS P + V P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 222 LPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 272
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ F+LVKD TG SKGYAFC Y D++VTD
Sbjct: 273 KAFNLVKDSATGLSKGYAFCEYVDINVTD 301
>gi|195429288|ref|XP_002062695.1| GK19586 [Drosophila willistoni]
gi|194158780|gb|EDW73681.1| GK19586 [Drosophila willistoni]
Length = 466
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 166/292 (56%), Gaps = 29/292 (9%)
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
P AM TR ARR+YVG +P ++ + FF+ + ++G G V+ N E
Sbjct: 124 PALAMV---TRQARRLYVGNIPFGVTDKEMMNFFNVQLQSLGLKQFHDGTPVLTCQTNLE 180
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP--SLAA--TLGPS------- 341
K FAF+E RS+ E + A+A DG+ F G +K+RRP DY+P SL++ T+G S
Sbjct: 181 KNFAFLEFRSMGETTQAIAFDGVNFRGQTLKIRRPHDYHPVTSLSSLETVGLSDTIVTSA 240
Query: 342 -QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
P P +L + L P S P +I++G LP EAQI+ELL SFG LRGF+LVKD
Sbjct: 241 HTPVPMKDLVST-LVPDS------PQKIYIGSLPPCLDEAQIKELLLSFGRLRGFNLVKD 293
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKPEQESVLLH 459
TG SKGYAF Y D +VT+ A A LNG+ +GD+ L V+R+ G N SVL
Sbjct: 294 ANTGMSKGYAFFEYVDSAVTEQAIAGLNGMLLGDRRLVVQRSIAGGRNASNHSPASVL-- 351
Query: 460 AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
Q+ + G+ ++++CL +V ++L DDEEYE+I D++QE K
Sbjct: 352 ---QVPGFPSVFSTGAA-TEILCLLNMVQPEDLLDDEEYEDICVDIKQECDK 399
>gi|95103124|gb|ABF51503.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Bombyx mori]
Length = 306
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 157/281 (55%), Gaps = 33/281 (11%)
Query: 168 RSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTGQQ 225
RSR R S +D+ PP + A AAGQIP AN +V
Sbjct: 40 RSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVADTP 83
Query: 226 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
A+PV+ TR ARR+YVG +P E+ FF+Q M + G G+ V+
Sbjct: 84 QAAVPVV-----GSTITRQARRLYVGNIPFGVTEEETMEFFNQQMH-LSGLAQAAGNPVL 137
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY P P NP
Sbjct: 138 ACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGTENP 191
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
+N+ A G+ S + P +IF+GGLP Y E Q++ELL SFG LR F+LVKD TG
Sbjct: 192 AINVPA-GVI--STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGL 248
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
SKGYAF Y D+S+TD A A LNG+++GDK L V+RA+ GA
Sbjct: 249 SKGYAFAEYVDISMTDQAIAGLNGMQLGDKKLIVQRASIGA 289
>gi|449802099|pdb|3VAF|A Chain A, Structure Of U2af65 Variant With Bru3 Dna
gi|449802100|pdb|3VAF|B Chain B, Structure Of U2af65 Variant With Bru3 Dna
gi|449802101|pdb|3VAG|A Chain A, Structure Of U2af65 Variant With Bru3c2 Dna
gi|449802102|pdb|3VAG|B Chain B, Structure Of U2af65 Variant With Bru3c2 Dna
gi|449802103|pdb|3VAH|A Chain A, Structure Of U2af65 Variant With Bru3c4 Dna
gi|449802104|pdb|3VAH|B Chain B, Structure Of U2af65 Variant With Bru3c4 Dna
gi|449802105|pdb|3VAI|A Chain A, Structure Of U2af65 Variant With Bru3c5 Dna
gi|449802106|pdb|3VAI|B Chain B, Structure Of U2af65 Variant With Bru3c5 Dna
gi|449802107|pdb|3VAJ|A Chain A, Structure Of U2af65 Variant With Bru5c6 Dna
gi|449802108|pdb|3VAJ|B Chain B, Structure Of U2af65 Variant With Bru5c6 Dna
gi|449802109|pdb|3VAK|A Chain A, Structure Of U2af65 Variant With Bru5 Dna
gi|449802110|pdb|3VAK|B Chain B, Structure Of U2af65 Variant With Bru5 Dna
gi|449802113|pdb|3VAL|A Chain A, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802114|pdb|3VAL|B Chain B, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802115|pdb|3VAL|D Chain D, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802116|pdb|3VAL|I Chain I, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802117|pdb|3VAM|A Chain A, Structure Of U2af65 Variant With Bru5c2 Dna
gi|449802118|pdb|3VAM|B Chain B, Structure Of U2af65 Variant With Bru5c2 Dna
Length = 174
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 124/199 (62%), Gaps = 30/199 (15%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+
Sbjct: 6 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 64
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
E + AMA DGIIF+G +K+RRP DY P L G
Sbjct: 65 ETTQAMAFDGIIFQGQSLKIRRPHDYQP-----------------------------LPG 95
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A
Sbjct: 96 AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAI 155
Query: 425 AALNGIKMGDKTLTVRRAN 443
A LNG+++GDK L V+RA+
Sbjct: 156 AGLNGMQLGDKKLLVQRAS 174
>gi|330803435|ref|XP_003289712.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
gi|325080222|gb|EGC33787.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
Length = 501
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 16/272 (5%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ +RR+YVG +PP + + FF+ + A N PG VV IN K FAF+E R+
Sbjct: 158 KQSRRIYVGNIPPGITDSELIEFFNAAVLAANLNVK-PGPPVVFCQINAPKCFAFIEFRT 216
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV-GLTPGSAGG 361
EEA+NAM DGI + +K+RRP DY Q N N +A+ + P +
Sbjct: 217 PEEATNAMRFDGITLKNYTLKIRRPKDY----------QQSNDPTNTSALPTIVPTNVPD 266
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
E +IFVGGLP E Q++ LL ++G L+ F+LVKD TG SKGYAFC Y D VTD
Sbjct: 267 SE--HKIFVGGLPSNLNEEQVKTLLSAYGKLKAFNLVKDTNTGISKGYAFCEYLDPDVTD 324
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVV 481
ACA+LNGI + DK L V+RA+ A + +V + + + + + PS+V+
Sbjct: 325 QACASLNGISLADKNLIVQRASIVAQTLSTIRSTV--PSSPTTSTTQTSIDNNTKPSRVI 382
Query: 482 CLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L +V ++L DD+EY+ IL D+++E F
Sbjct: 383 QLLNLVDKEDLYDDKEYDNILIDVKEECENFG 414
>gi|195393580|ref|XP_002055432.1| GJ19364 [Drosophila virilis]
gi|194149942|gb|EDW65633.1| GJ19364 [Drosophila virilis]
Length = 476
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 177/341 (51%), Gaps = 64/341 (18%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P V + TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP----------------- 332
N +K FAF+E RS++E + AMA DGI +G +K+RRP DY P
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQDLKIRRPHDYQPMPGITDTPAVKPAVVSS 195
Query: 333 SLAATLGPSQPN-------PN--------------LNLAAVG-LTP----GSAGGLEGPD 366
+ +T+ P P+ PN L++ A +TP G+ LE
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDEQKEFTLNAFLDIGACKKVTPHTNTGAIASLEVDP 255
Query: 367 RIF------------VGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
RI L T ++ELL SFG LR F+LVKD TG SKGYAFC Y
Sbjct: 256 RIVNLIDELLIRRTVKASLGSSATSRFVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 315
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK---PEQESVLLHAQQQIALQRLML 471
DLS+TD + A LNG+++GDK L V+RA+ GA + +SV+L Q+ ++
Sbjct: 316 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTSQSVML----QVPGLSTVV 371
Query: 472 QPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
G P++V+CL +V+ DEL+D+EEYE+ILED+++E K+
Sbjct: 372 TSGP-PTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 411
>gi|195057468|ref|XP_001995263.1| GH23055 [Drosophila grimshawi]
gi|193899469|gb|EDV98335.1| GH23055 [Drosophila grimshawi]
Length = 453
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 159/284 (55%), Gaps = 19/284 (6%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A TR ARR+YVG +P + + FF+ + + G G AV+ N EK F
Sbjct: 118 ASIATVTRQARRLYVGNIPFNTTDDEMRAFFNVQIQRMCGALENDGKAVLTCQTNLEKNF 177
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS------LAATLGPSQPNPNLNL 349
AF+E+RS++E + A++ DGI + G +K+RRP DY+ + AT S N
Sbjct: 178 AFLELRSMDETTLAISFDGINYRGQSLKIRRPHDYHAGGTTGSFVGATGYVSGAVVQSNA 237
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
A + P + P +I++GGLP + Q++ELL +FG LRGF++VKD E G+ KGY
Sbjct: 238 AIATVVP------DTPHKIYIGGLPTCLNDDQVKELLMTFGHLRGFNMVKD-ELGHGKGY 290
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AFC Y D S+T+ A A LNG+++G++ L V+R+ G Q VL Q+
Sbjct: 291 AFCEYMDASITEQAIAGLNGMQLGERKLIVQRSLAGVRNLVTHQLPVL-----QVPGFPA 345
Query: 470 MLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++ G ++V+CL +V DEL DD EYE+I +D+++E KF
Sbjct: 346 DVKVGKA-TEVLCLLNMVMPDELLDDAEYEDIRKDIKEECAKFG 388
>gi|340373805|ref|XP_003385430.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Amphimedon
queenslandica]
Length = 529
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 181/386 (46%), Gaps = 65/386 (16%)
Query: 131 RSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAM 190
R R+ + D RG EH S + ++ + ++ + PP
Sbjct: 137 RRRNPSQWWDIP--------------PRGF-EHISPLQFKAMQAAGQVPTVGIPPP---- 177
Query: 191 LAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYV 250
A G P PA Q TR ARR+Y+
Sbjct: 178 -ALGEATTPLPIPPPPQPA----------------------------ASQLTRQARRLYI 208
Query: 251 GGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM 310
G +P E+ + FF++ M + PG V+ V IN +K FAF+E RSVEE +NAM
Sbjct: 209 GNIPFGIAEEVMVNFFNEKMLE-AKLCSAPGIPVLAVQINMDKNFAFIEFRSVEETTNAM 267
Query: 311 ALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL--EGPDRI 368
A DGI+ +G +K+RRP DY P + P PG + +GP ++
Sbjct: 268 AFDGIVLQGQSLKIRRPKDYAPIPGVDIMPKH------------VPGVISTVVPDGPHKV 315
Query: 369 FVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALN 428
F GGLP Y ++ Q++ELL SFG L+ F+LVKD T SKGY F Y D VTD A LN
Sbjct: 316 FCGGLPTYLSDDQVKELLSSFGDLKAFNLVKDSGTSFSKGYCFFEYLDTDVTDGAIQGLN 375
Query: 429 GIKMGDKTLTVRRANQGANQPKPEQESV-LLHAQQQIALQRL-MLQPGSVPSKVVCLTQV 486
G+ +GDK L V+RA+ GA + S + I++ L M + V+CL +
Sbjct: 376 GMALGDKKLVVQRASVGAKVMEEYDISTDITSMAMPISIPGLQMPSTAQTATTVLCLMNM 435
Query: 487 VSADELKDDEEYEEILEDMRQEGGKF 512
+ +EL+DD+EYE ILED+R+E +
Sbjct: 436 TTEEELRDDDEYEGILEDVREECSNY 461
>gi|393236224|gb|EJD43774.1| hypothetical protein AURDEDRAFT_137718 [Auricularia delicata
TFB-10046 SS5]
Length = 389
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 164/283 (57%), Gaps = 31/283 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIG-GNTAGPGDAVVNVYINHEKKFAFVEM 300
R +RR+Y+G + P E+++ FF+Q M + G GD V+ V +N+EK +AFVE
Sbjct: 25 ARQSRRLYIGSITPEITEENLTKFFNQKMREMNLGQQNASGDPVLAVQVNYEKNYAFVEF 84
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN-LNLAAVGLTPGSA 359
RS ++A+ AMA DGIIF+ P+++RRP DY +G P+ +++ V T
Sbjct: 85 RSADDATAAMAFDGIIFQSGPLRIRRPKDY-------MGNEYSAPSAMHVPGVVST---- 133
Query: 360 GGLEGPD---RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
PD +IFVGGLP Y E Q+ ELL+SFG L+ F+LV++ G SKGYAF Y D
Sbjct: 134 ---NVPDSLHKIFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENNNGPSKGYAFFEYVD 190
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQ----PKPEQESVLLHAQQQIALQRLMLQ 472
VT++A LNG+++GD+ L V+RA+ G+ P P+ + Q + R ++
Sbjct: 191 EEVTEVAIQGLNGMELGDRVLAVQRASVGSKNGMVVPNPD-----IPYDQMPEVPRPIMP 245
Query: 473 PGSVPS---KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
P+ +++ + +V ++L DDEE+ E+ ED+++E KF
Sbjct: 246 LNEAPTQDARILLMLNMVVPEDLVDDEEFAELYEDVKEECAKF 288
>gi|112490659|pdb|2G4B|A Chain A, Structure Of U2af65 Variant With Polyuridine Tract
Length = 172
Score = 179 bits (454), Expect = 3e-42, Method: Composition-based stats.
Identities = 93/199 (46%), Positives = 124/199 (62%), Gaps = 30/199 (15%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+
Sbjct: 4 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 62
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
E + AMA DGIIF+G +K+RRP DY P L G
Sbjct: 63 ETTQAMAFDGIIFQGQSLKIRRPHDYQP-----------------------------LPG 93
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A
Sbjct: 94 AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAI 153
Query: 425 AALNGIKMGDKTLTVRRAN 443
A LNG+++GDK L V+RA+
Sbjct: 154 AGLNGMQLGDKKLLVQRAS 172
>gi|219116422|ref|XP_002179006.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409773|gb|EEC49704.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 325
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 160/275 (58%), Gaps = 14/275 (5%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 299
Q TRHARR+YVG LPP E ++ F + + I T D V++ YINHE++F FVE
Sbjct: 2 QQTRHARRLYVGNLPPHITEDAIHVEFRRAIE-IASPTPLSEDPVLSTYINHERRFCFVE 60
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
++VE A+ M LDG+ +G PVKV+RP+DYN ++A + PS P L+++ +G+ G+
Sbjct: 61 FKTVEMATACMNLDGLHVQGVPVKVKRPNDYNANMAPKIHPSA-LPPLDVSKLGIVSGTV 119
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV-KDRETGNSKGYAFCVYQDLS 418
+GP++IF+GGL Y+ ++Q+ ELL++FG ++ F LV D E+ SKGY F Y D +
Sbjct: 120 E--DGPNKIFIGGLHYHLQDSQVMELLQAFGKIKAFHLVSNDPESNMSKGYCFVEYADPN 177
Query: 419 VTDIACAALNGIKMGD-KTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+T IA LNG+ +G+ K LT R A Q ++P
Sbjct: 178 ITPIAVQGLNGMDIGNGKALTARLAGDRTGGAGGAAFLAHAMDPQNGV--------PNIP 229
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++V+ L +V+ ++L D EY+ + ++++ E KF
Sbjct: 230 TRVLVLHNMVTDEDLATDTEYQGLFDEVKDECAKF 264
>gi|395529346|ref|XP_003766777.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Sarcophilus
harrisii]
Length = 462
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 159/299 (53%), Gaps = 34/299 (11%)
Query: 160 RSEHRSRSRSRSRSKSKRI--------SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIP 211
+ EH RS K K+I GF+ P AAGQIP A +P
Sbjct: 118 KEEHGGVIRSPRHEKKKKIRKYWDVPPPGFEHITPMQY-----KAMQAAGQIP-ATALLP 171
Query: 212 GMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA 271
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 172 TMTPDGL---------AVTPAPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQM- 221
Query: 272 AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 331
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY
Sbjct: 222 RLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQ 281
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
P + PS P + V P SA ++F+GGLP Y + Q++ELL SFGP
Sbjct: 282 PLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQVKELLTSFGP 332
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV-RRANQGANQP 449
L+ F+LVKD TG SKGYAFC Y D++VTD N I+ + + +AN+GA P
Sbjct: 333 LKAFNLVKDSATGLSKGYAFCEYVDINVTDQGSPRPNLIRDCRGPVMIDIKANRGATLP 391
>gi|440792998|gb|ELR14199.1| U2 snRNP auxilliary factor, large subunit, splicing factor
subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 462
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 163/326 (50%), Gaps = 55/326 (16%)
Query: 204 PGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVA 263
PGA A+ G+ P LV Q Q R ARR+YVG +PP ++
Sbjct: 140 PGALGAMAGLLPGAMGLVPTAQQ-------TAQQAAQINRQARRLYVGSIPPGVSDPD-- 190
Query: 264 TFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVK 323
VV+ +N +K F+F+E +++EA+ MALDGI G +K
Sbjct: 191 -----------------HRPVVSSQLNPDKSFSFIEFSTIDEATAGMALDGITMNGMTLK 233
Query: 324 VRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG--SAGGLEGPDRIFVGGLPYYFTEAQ 381
VRRP DY S P + PG S + P++IF+GGLP Y EAQ
Sbjct: 234 VRRPKDYV---------SPPTAQAPASGGIHIPGIVSTNVPDSPNKIFIGGLPSYLNEAQ 284
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
++ELL +FGPL+ F+LVKD TGNSKGYAF Y D SVTD AC LNG+K+GDKTL V+R
Sbjct: 285 VKELLTAFGPLKAFNLVKDTATGNSKGYAFFEYLDASVTDRACQGLNGMKLGDKTLLVQR 344
Query: 442 ANQGANQ-------PKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKD 494
AN GA Q P S +L+A P + + L +V +EL
Sbjct: 345 ANIGAKQDGTGGLIMMPMDPSGMLNA-----------SPSAASLLNLQLLNLVRPEELVS 393
Query: 495 DEEYEEILEDMRQEGGKFAFCSPTFC 520
DE++ +I+ED+RQE K+ F
Sbjct: 394 DEDHADIVEDVRQECEKYGNVMSVFV 419
>gi|170053756|ref|XP_001862821.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
gi|167874130|gb|EDS37513.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
Length = 382
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 155/288 (53%), Gaps = 41/288 (14%)
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTG 223
+ RSR R S +D+ PP + A AAGQIP AN +V
Sbjct: 70 KGRSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVAD 113
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
A+PV+ TR ARR+YVG +P E+ + FF+Q M + G G+
Sbjct: 114 TPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNP 167
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
V+ IN +K FAF+E RS++E + AMA DGI F+G +K+RRP DY QP
Sbjct: 168 VLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QP 216
Query: 344 NPNLNLAAVGLTPGSAGGL------EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
P + +AV G+ + P +IF+GGLP Y E Q++ELL SFG L+ F+L
Sbjct: 217 MPGMTDSAVAPVQEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNL 276
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG 445
VKD TG SKGYAF Y + S+TD A A LNG+++GDK L V+RA+ G
Sbjct: 277 VKDAATGLSKGYAFAEYVEYSITDQAIAGLNGMQLGDKKLIVQRASVG 324
>gi|194756144|ref|XP_001960339.1| GF13310 [Drosophila ananassae]
gi|190621637|gb|EDV37161.1| GF13310 [Drosophila ananassae]
Length = 434
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 32/295 (10%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP-GDAVVNVYINHEKK 294
A TR ARR+YVG +P E+ + FF+Q + A+G ++ G AV+ N EK
Sbjct: 88 AAIAMVTRQARRLYVGNIPFGVTEEEMMGFFNQQLIALGSSSLKTDGKAVLTCQTNLEKN 147
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP--------NPN 346
FAF+E RS++EA+ A+ DGI+F G +K+RRP DY+P A++ S+P +P
Sbjct: 148 FAFLEFRSMDEATQAINFDGIVFRGQTLKIRRPHDYHP--VASISCSEPGFATTTMTSPQ 205
Query: 347 LNLAAVG-------LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
+ ++ G L P S P +I++GGLP E QI+ELL SFG L+GF+LVK
Sbjct: 206 IVVSTTGPNHVISTLVPDS------PQKIYIGGLPTCLNETQIKELLLSFGQLKGFNLVK 259
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D T SKG+AF Y D VT+ A A LNG+++GD+ L V+R+ G +VL
Sbjct: 260 DANTSLSKGFAFFEYVDPLVTEQAIAGLNGMQLGDRKLVVQRSIAGGRNSGGVPATVL-- 317
Query: 460 AQQQIALQRLMLQPGS-VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ L P + P++V+CL +V +EL DDEEYE+I D++QE K+
Sbjct: 318 -----QVPGLTAIPNTESPTEVLCLLNMVLPEELLDDEEYEDIRTDIQQECAKYG 367
>gi|198456623|ref|XP_001360392.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
gi|198135682|gb|EAL24967.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 156/304 (51%), Gaps = 31/304 (10%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP----GDAVVNVYINH 291
A TR ARR+YVG +P E + FF+Q +G N G G AV++ N
Sbjct: 116 AAIAMVTRQARRLYVGNIPFGVTEDDIMAFFNQQFLLLGDNCGGQLCLDGKAVLSCQANL 175
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS-----------LAATLGP 340
+K FAF+E RS++EA+ A DGI F G +K+RRP DY+P + +G
Sbjct: 176 DKNFAFIEFRSMQEATQATTFDGISFRGQVLKIRRPHDYHPVGSVGAAAGAGSIPDAVGG 235
Query: 341 SQPNPNLNLAAVGLTPGSAGGL-------EGPDRIFVGGLPYYFTEAQIRELLESFGPLR 393
+ + GS G + P +I++GGLP E QI+ELL SFG LR
Sbjct: 236 CASSAAAKSRSSSAETGSLGSQAISNLVPDSPHKIYIGGLPTCLNETQIKELLLSFGQLR 295
Query: 394 GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA----NQGANQP 449
GF+LVKD T SKGYAF Y D +T+ A LNG+++GD+ L V+R+ NQ
Sbjct: 296 GFNLVKDPSTTLSKGYAFFEYVDPLLTEQVIANLNGMQLGDRRLIVQRSIPSGRYAGNQQ 355
Query: 450 KPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
P Q L+ + L + ++V+CL +V +EL D+EEYE+I D+ QE
Sbjct: 356 IPIQVPGLVATSLTGSTAGL-----NNATQVLCLLNMVLPEELLDNEEYEDIRADIEQEC 410
Query: 510 GKFA 513
K+
Sbjct: 411 SKYG 414
>gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]
Length = 449
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 18/290 (6%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP----GDAVVNVYINH 291
A TR ARR+YVG +P ++ + FF+ + A+G G+AV+ N
Sbjct: 101 AAISMITRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNL 160
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN-----PN 346
EK FAF+E RS++EAS A+ DG++F G +K+RRP DY P + ++ + P
Sbjct: 161 EKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRVPA 220
Query: 347 LNLA---AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
+N+A AV L P + + P++I+VGGLP + Q++ELL+SFG L+G +LV D T
Sbjct: 221 INVAQQPAVTL-PVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNT 279
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQ 463
+KG+AF Y D SVTD A A L+G+ +GD+ L V+R+ G P +L
Sbjct: 280 NLNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQRSIPGGKNAFPGHLPTVLQVPGI 339
Query: 464 IALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
LQ PGS P++ +CL +V +EL DDEE+E+I D++QE KF
Sbjct: 340 STLQ----DPGS-PTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFG 384
>gi|24659166|ref|NP_611769.2| large subunit 2 [Drosophila melanogaster]
gi|7291545|gb|AAF46969.1| large subunit 2 [Drosophila melanogaster]
gi|201066057|gb|ACH92438.1| FI08027p [Drosophila melanogaster]
Length = 449
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 18/290 (6%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP----GDAVVNVYINH 291
A TR ARR+YVG +P ++ + FF+ + A+G G+AV+ N
Sbjct: 101 AAISMITRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNL 160
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN-----PN 346
EK FAF+E RS++EAS A+ DG++F G +K+RRP DY P + ++ + P
Sbjct: 161 EKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRVPA 220
Query: 347 LNLA---AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
+N+A AV L P + + P++I+VGGLP + Q++ELL+SFG L+G +LV D T
Sbjct: 221 INVAQQPAVTL-PVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNT 279
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQ 463
+KG+AF Y D SVTD A A L+G+ +GD+ L V+R+ G P +L
Sbjct: 280 NLNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQRSIPGGKNAFPGHLPTVLQVPGI 339
Query: 464 IALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
LQ PGS P++ +CL +V +EL DDEE+E+I D++QE KF
Sbjct: 340 STLQ----DPGS-PTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFG 384
>gi|449680331|ref|XP_002158219.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 259
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 126/215 (58%), Gaps = 24/215 (11%)
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
RSVEE + AMA DGI+ +G +K+RRP DY QP P ++ PG
Sbjct: 1 FRSVEETTLAMAFDGIMLQGQALKIRRPKDY-----------QPIPGISEMQATHIPGVV 49
Query: 360 GGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
+ + +++FVGGLP Y E Q++ELL +FG LR F+LVKD TG SKGYAFC Y D+
Sbjct: 50 STVVSDTINKVFVGGLPNYLNEDQVKELLSTFGDLRSFNLVKDSATGLSKGYAFCEYVDI 109
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+TD+A A +NG+++GDK L V+RA+ G+ Q+ + L
Sbjct: 110 GITDVAIAGMNGMQLGDKKLVVQRASVGSKT-----------MTAQLNIPGFDLSKEITA 158
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ ++CL +V ADEL DDE+Y+EI ED+R+E K+
Sbjct: 159 TNILCLMNMVVADELIDDEDYDEIFEDIREECSKY 193
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 10/207 (4%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ +RR+YVG +PP ++ + FF+ + A NT PG VV IN K FAF+E RS
Sbjct: 265 KQSRRIYVGNIPPGISDSELMEFFNAAVLAANLNTK-PGPPVVFCQINAPKCFAFIEFRS 323
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
EEA+NAM DGI + +K+RRP DY + T G + P++ V P S
Sbjct: 324 PEEATNAMRFDGISLKNFTLKIRRPKDYQSTSDNTGGNASLLPSIVPTNV---PDSE--- 377
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
++I+VGGLP +E Q++ LL ++G L+ F+LVKD TG SKG+AFC YQD VTD+
Sbjct: 378 ---NKIYVGGLPSNLSEEQVKSLLSAYGKLKAFNLVKDTNTGVSKGFAFCEYQDSEVTDV 434
Query: 423 ACAALNGIKMGDKTLTVRRANQGANQP 449
AC+ LNGI + DKTL V+RA+ G+ P
Sbjct: 435 ACSKLNGIPLADKTLVVQRASIGSKPP 461
>gi|221484193|gb|EEE22489.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 820
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 23/223 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+RHAR+VYVG LP + V +F++++ + PGD +V+VY+N ++FAF+E R
Sbjct: 279 SRHARKVYVGNLPVPVTQAEVQQYFNELLTTLLPKKV-PGDTIVHVYVNPSRRFAFLEHR 337
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA--------ATLG---------PSQPN 344
S+EEA+ + LDG+ + + +RRP DYNP+LA A LG PSQ
Sbjct: 338 SIEEANFTLGLDGVSWRNCALSLRRPQDYNPTLAEQQYREERARLGSMTGFAVPPPSQAA 397
Query: 345 PNLNLAAVGLTPGSAGGL-----EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
+ A L G+ G + + P +IF+GGLP+ TE ++LLE+FG LR +VK
Sbjct: 398 TPASPAESSLIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRALHVVK 457
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
D++ G+ KG+AFC Y D +VTD+A A LN +++ D+ L VRRA
Sbjct: 458 DQQRGDCKGFAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRA 500
>gi|237838479|ref|XP_002368537.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966201|gb|EEB01397.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|221505828|gb|EEE31473.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 816
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 23/223 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+RHAR+VYVG LP + V +F++++ + PGD +V+VY+N ++FAF+E R
Sbjct: 275 SRHARKVYVGNLPVPVTQAEVQQYFNELLTTLLPKKV-PGDTIVHVYVNPSRRFAFLEHR 333
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA--------ATLG---------PSQPN 344
S+EEA+ + LDG+ + + +RRP DYNP+LA A LG PSQ
Sbjct: 334 SIEEANFTLGLDGVSWRNCALSLRRPQDYNPTLAEQQYREERARLGSMTGFAVPPPSQAA 393
Query: 345 PNLNLAAVGLTPGSAGGL-----EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
+ A L G+ G + + P +IF+GGLP+ TE ++LLE+FG LR +VK
Sbjct: 394 TPASPAESSLIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRALHVVK 453
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
D++ G+ KG+AFC Y D +VTD+A A LN +++ D+ L VRRA
Sbjct: 454 DQQRGDCKGFAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRA 496
>gi|195149862|ref|XP_002015874.1| GL11290 [Drosophila persimilis]
gi|194109721|gb|EDW31764.1| GL11290 [Drosophila persimilis]
Length = 487
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 157/309 (50%), Gaps = 41/309 (13%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP----GDAVVNVYINH 291
A TR ARR+YVG +P E + FF+Q +G + G G AV++ N
Sbjct: 112 AAIAMVTRQARRLYVGNIPFGVTEDDIMAFFNQQFLLLGDDCGGQLCLDGKAVLSCQANL 171
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS-----------LAATLGP 340
+K FAF+E RS++EA+ A DGI F G +K+RRP DY+P + +G
Sbjct: 172 DKNFAFIEFRSMQEATQATTFDGISFRGQVLKIRRPHDYHPVGSVGAAAGAGSIPDAVGG 231
Query: 341 SQPNPNLNLAAVGLTPGSAGGL-------EGPDRIFVGGLPYYFTEAQIRELLESFGPLR 393
+ + GS G + P +I++GGLP E QI+ELL SFG LR
Sbjct: 232 CASSAAAKSRSSSADTGSLGSQAISNLVPDSPHKIYIGGLPTCLNETQIKELLLSFGQLR 291
Query: 394 GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQ 453
GF+LVKD T SKGYAF Y D +T+ A LNG+++GD+ L V+R+ P
Sbjct: 292 GFNLVKDPSTTLSKGYAFFEYVDPLLTEQVIANLNGMQLGDRRLIVQRSI-----PSGRY 346
Query: 454 ESVLLHAQQQIALQRLMLQPGSV---------PSKVVCLTQVVSADELKDDEEYEEILED 504
+ QQI +Q L S+ ++V+CL +V +EL D+EEYE+I D
Sbjct: 347 AGI-----QQIPIQVPGLVATSLTGSTAGLNNATQVLCLLNMVLPEELLDNEEYEDIRAD 401
Query: 505 MRQEGGKFA 513
+ QE K+
Sbjct: 402 IEQECSKYG 410
>gi|58268792|ref|XP_571552.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|57227787|gb|AAW44245.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 651
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 154/277 (55%), Gaps = 25/277 (9%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
R R+Y+GG+ EQ + FF+ +M G G D V IN+++ FAF+E+
Sbjct: 271 VRQNNRLYIGGIKEDMQEQQIQDFFNNLMKE-KGMADGKEDPVKQCQINNDRNFAFIELH 329
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
+ E+A+ A+ LDG++ +GA ++VRRP DY + +P L + P A
Sbjct: 330 TPEQATAALELDGVVLDGASLRVRRPKDY----------AGIDPLLQTFNGVVAPSVA-- 377
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ P+++F+GG+P Y + Q+ ELL+SFG L+ F+LVK+ G SKG+AF Y D VTD
Sbjct: 378 -DSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SAGVSKGFAFAEYLDPEVTD 435
Query: 422 IACAALNGIKMGDKTLTVRRA----NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+A L+ +GD+ L V+RA N G N P P + L A+ LM P
Sbjct: 436 MAIQGLHNFSLGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQ-----AIPHLMQNNADAP 490
Query: 478 -SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+V+ L +V+ +EL +D++Y +I+ED+ +E K+
Sbjct: 491 SSRVMLLLNMVTPEELYNDDDYNDIIEDINEECSKYG 527
>gi|134113282|ref|XP_774666.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257310|gb|EAL20019.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 652
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 154/277 (55%), Gaps = 25/277 (9%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
R R+Y+GG+ EQ + FF+ +M G G D V IN+++ FAF+E+
Sbjct: 272 VRQNNRLYIGGIKEDMQEQQIQDFFNNLMKE-KGMADGKEDPVKQCQINNDRNFAFIELH 330
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
+ E+A+ A+ LDG++ +GA ++VRRP DY + +P L + P A
Sbjct: 331 TPEQATAALELDGVVLDGASLRVRRPKDY----------AGIDPLLQTFNGVVAPSVA-- 378
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ P+++F+GG+P Y + Q+ ELL+SFG L+ F+LVK+ G SKG+AF Y D VTD
Sbjct: 379 -DSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SAGVSKGFAFAEYLDPEVTD 436
Query: 422 IACAALNGIKMGDKTLTVRRA----NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+A L+ +GD+ L V+RA N G N P P + L A+ LM P
Sbjct: 437 MAIQGLHNFSLGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQ-----AIPHLMQNNADAP 491
Query: 478 -SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+V+ L +V+ +EL +D++Y +I+ED+ +E K+
Sbjct: 492 SSRVMLLLNMVTPEELYNDDDYNDIIEDINEECSKYG 528
>gi|402906865|ref|XP_003916203.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Papio anubis]
Length = 446
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 183/362 (50%), Gaps = 49/362 (13%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E V + P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLE------------------------VSWGNRSGP 210
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
L A + P + P SA ++F+GGLP Y + Q++ELL SFGPL
Sbjct: 211 VLCALAMLTFPE----WVVSTVVPDSA------HKLFIGGLPNYLNDDQVKELLTSFGPL 260
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 452
+ F+LVKD TG SKGYAFC Y D++VTD A A LNG+++GDK L V+RA+ GA
Sbjct: 261 KAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLS 320
Query: 453 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q L +Q G P++V+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 321 TINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY 380
Query: 513 AF 514
Sbjct: 381 GL 382
>gi|195585954|ref|XP_002082743.1| GD25073 [Drosophila simulans]
gi|194194752|gb|EDX08328.1| GD25073 [Drosophila simulans]
Length = 445
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 163/295 (55%), Gaps = 28/295 (9%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP----GDAVVNVYINH 291
A TR ARR+YVG +P E+ + FF+ + A+G G AV+ N
Sbjct: 97 AAISMITRQARRLYVGNIPFGVTEEEMMQFFNHRITALGYEAKSSHYMDGKAVLTCQTNL 156
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ-------PN 344
EK FAF+E RS++EA+ A+ DG++F G +K+RRP DY P + + + P+
Sbjct: 157 EKNFAFLEFRSIDEATQALNFDGMVFRGQTLKIRRPHDYQPVPSISFSAMENYRSFRVPD 216
Query: 345 ------PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV 398
PN+ + + P S P++I+VGGLP + Q++ELL+SFG L+G +LV
Sbjct: 217 TTIANPPNVTIPVTTIVPDS------PNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLV 270
Query: 399 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 458
D T +KG+AF Y D VTD A A L+G+ +GD+ L V+R+ G P + ++
Sbjct: 271 MDGNTSLNKGFAFFEYYDPLVTDHAIAGLHGMLLGDRRLVVQRSIPGGKNAFPGHTAPVV 330
Query: 459 HAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q+ +L PGS P++ +CL +V +EL DDEE+E+I D++QE KF
Sbjct: 331 ----QVPGISTLLDPGS-PTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFG 380
>gi|405121398|gb|AFR96167.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 655
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 153/277 (55%), Gaps = 25/277 (9%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
R R+Y+GG+ EQ + FF+ +M G G D V IN+++ FAF+E+
Sbjct: 275 VRQNNRLYIGGIKEDMQEQQIQDFFNNLMKE-KGMADGKEDPVKQCQINNDRNFAFIELH 333
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
+ E+A+ A+ LDG++ +GA ++VRRP DY + +P L + P A
Sbjct: 334 TPEQATAALELDGVVLDGASLRVRRPKDY----------AGIDPLLQTFNGVVAPSVA-- 381
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ P+++F+GG+P Y + Q+ ELL+SFG L+ F+LVK+ G SKG+AF Y D VTD
Sbjct: 382 -DSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SAGVSKGFAFAEYLDPEVTD 439
Query: 422 IACAALNGIKMGDKTLTVRRA----NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+A L+ +GD+ L V+RA N G N P P + L A+ LM P
Sbjct: 440 MAIQGLHNFALGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQ-----AIPHLMQNNADAP 494
Query: 478 -SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+V+ L +V+ +EL +D++Y +I+ED+ E K+
Sbjct: 495 SSRVMLLLNMVTPEELYNDDDYNDIIEDINDECSKYG 531
>gi|353240191|emb|CCA72072.1| related to pre-mRNA splicing factor U2AF large chain
[Piriformospora indica DSM 11827]
Length = 403
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 170/334 (50%), Gaps = 55/334 (16%)
Query: 203 IPGAN----PAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
+PGAN P I G P+ TG R +RR+Y+G + P A+
Sbjct: 11 LPGANRSHGPQIIGFTGAHPPVATGM-----------VSNSNLARQSRRLYLGSITPLAD 59
Query: 259 EQSVATFFSQVMA--AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 316
E+S+A FF+ M + ++A P V+ V +N EK +AFVE RS E+A+ MALDG +
Sbjct: 60 EESIALFFNSQMRERKLTTSSAPP---VLAVQVNREKNYAFVEFRSAEDATAGMALDGTV 116
Query: 317 FEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYY 376
F P++VRRP DY GP A L P + + ++IF+G LP +
Sbjct: 117 FLDGPLRVRRPHDYA-------GPEAMTGVAGFAT--LLPATMP--DSVNKIFIGNLPTH 165
Query: 377 FTEAQIRELLESFGPLRGFDLVKDRETGNSK----------------GYAFCVYQDLSVT 420
TE QI ELL+SFG L+ F+LV++ T SK G+AF Y D +VT
Sbjct: 166 LTEDQIVELLKSFGELKAFNLVREHGTNVSKVFTVRITLSMNLTGSQGFAFVEYADPAVT 225
Query: 421 DIACAALNGIKMGDKTLTVRRANQGA--NQPKPEQESVLLHAQQQIALQRLMLQPGSVPS 478
DIA +LNG+ +GDK L V+RA+ GA P P + + + L +
Sbjct: 226 DIATESLNGMDLGDKKLVVQRASVGAKGGVPIPPEAMDIPAPIVAVDLNK------EANG 279
Query: 479 KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+VV + +V A++L DD EYEEIL+D+R E F
Sbjct: 280 RVVLMLNMVVAEDLMDDVEYEEILDDIRSECSGF 313
>gi|198432988|ref|XP_002130386.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 1 [Ciona intestinalis]
Length = 482
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 165/347 (47%), Gaps = 90/347 (25%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGAL---PVMPVQAMTQQATRHARRVYVG---- 251
AAGQIP + T Q G++ + V Q TR ARR+YVG
Sbjct: 126 AAGQIP--------------LMATSQTMGSITAEATLQVPVAGSQMTRQARRLYVGNIPF 171
Query: 252 ------------------------GLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV 287
G P A V
Sbjct: 172 GVTEDAMMDFFNNQMQIAGLAQAPGQPILA-----------------------------V 202
Query: 288 YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL 347
IN +K FAF+E RSV+E + A+A DGI F +K+RRPSDY P L S P +
Sbjct: 203 QINLDKNFAFLEFRSVDETTQALAFDGINFMNQSLKIRRPSDYKP-----LPGSLEQPAI 257
Query: 348 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
+L V T + ++F+GGLP Y + Q++ELL SFGPLR F+LVKD T SK
Sbjct: 258 HLPGVISTVVQ----DSQHKMFIGGLPNYLNDDQVKELLTSFGPLRAFNLVKDSATALSK 313
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKPEQESVLLHAQQQIAL 466
GYAF + D S+TD A A LNG+++GDK L V+RA+ GA N P + A + +
Sbjct: 314 GYAFAEFADYSLTDQAIAGLNGMQLGDKKLIVQRASIGAKNNPHGA-----IMAPVTLQI 368
Query: 467 QRLMLQPGSVP-SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ G+ P + V+CL +V +EL DDEEYEEI+ED++ E GK
Sbjct: 369 PGMAHATGAGPATTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKL 415
>gi|321260434|ref|XP_003194937.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Cryptococcus gattii WM276]
gi|317461409|gb|ADV23150.1| Splicing factor (U2 snRNP auxiliary factor large subunit), putative
[Cryptococcus gattii WM276]
Length = 654
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 152/277 (54%), Gaps = 25/277 (9%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
R R+Y+GG+ E + FF+ +M G G D V IN+++ FAF+E+
Sbjct: 274 VRQNNRLYIGGIKEDMQENQIQDFFNNLMKE-KGMADGKEDPVKQCQINNDRNFAFIELH 332
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
+ E+A+ A+ LDG++ +GA ++VRRP DY + +P L + P A
Sbjct: 333 TPEQATAALELDGVVLDGASLRVRRPKDY----------AGIDPLLQTFNGIVAPSVA-- 380
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ P+++F+GG+P Y + Q+ ELL+SFG L+ F+LVK+ G SKG+AF Y D VTD
Sbjct: 381 -DSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SAGVSKGFAFAEYLDPEVTD 438
Query: 422 IACAALNGIKMGDKTLTVRRA----NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
+A L+ +GD+ L V+RA N G N P P + L A+ LM P
Sbjct: 439 MAIQGLHNFALGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQ-----AIPHLMQNNADAP 493
Query: 478 -SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+V+ L +V+ +EL +D++Y +I+ED+ E K+
Sbjct: 494 TSRVMLLLNMVTPEELYNDDDYNDIIEDINDECSKYG 530
>gi|302411252|ref|XP_003003459.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261357364|gb|EEY19792.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
Length = 568
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 188/357 (52%), Gaps = 49/357 (13%)
Query: 174 KSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPL--VTGQQFGALP- 230
+ +R++ +D+ PP + A A +G P +PG P P+ Q F P
Sbjct: 177 RKRRLTQWDIKPPGYENVTA-EQAKLSGMFP-----LPGA-PRQQPMDPTKLQAFMNQPG 229
Query: 231 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
+ ++ +R A+R+ V LP +A E+SVA+FF+ + G N D V+ ++
Sbjct: 230 TVNSASLKPSNSRQAKRLLVSKLPSSATEESVASFFN--LQLNGLNVIESTDPCVSCQLS 287
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFE---------GAPVKVRRPSDY-NPSLAATLGP 340
++K F VE R+ EA+ A+ALDGI E G +++RRP DY P++ L P
Sbjct: 288 NDKSFCVVEFRNASEATVALALDGISMEADSGTDGAAGRGMEIRRPKDYIVPAVTEEL-P 346
Query: 341 SQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
+P G+ S+ ++ P+++ + G P Y TE Q+ ELL SFG L+ F LV+D
Sbjct: 347 YEP---------GVV--SSNVVDTPNKLSITGFPPYLTEEQVTELLTSFGELKAFVLVRD 395
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
R T S+G+ FC Y D + D+A L+G+ +G+ L +++A+ G Q A
Sbjct: 396 RHTDESRGFVFCEYVDSAANDVAIQGLSGMDLGNSKLKIQKASIGVTQ----------VA 445
Query: 461 QQQIALQRLMLQPGSVP-----SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++ + + + G+ S+V+ L +V+ADEL D+E+YEEI+ED+++E K+
Sbjct: 446 GVEMGVAAMSMLAGTTATDSEESRVLQLLNMVTADELMDNEDYEEIVEDVQEECAKY 502
>gi|388580158|gb|EIM20475.1| hypothetical protein WALSEDRAFT_55089 [Wallemia sebi CBS 633.66]
Length = 391
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 155/272 (56%), Gaps = 22/272 (8%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R +RRV++G L P NE+++ F+ M+ I PG+ VVNV + H++ +A++E R+
Sbjct: 30 RASRRVFIGDLKPNHNEENLTKLFNDKMSTIDQVAKIPGEPVVNVTVKHDRGYAYIEFRN 89
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
+EA+ A+ DG IF+G ++++RP + L G + G P S
Sbjct: 90 TDEAAYALQFDGTIFQGEGIQIKRPQEVLDELQRKQGHT---------VSGTVPDS---- 136
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
+IFVG LP + + Q+ ELL SFG LR F+LVK+ + SKG+AFC Y D ++TDI
Sbjct: 137 --DQKIFVGSLPTFLNDEQVMELLGSFGELRSFNLVKEGTSDVSKGFAFCEYMDPALTDI 194
Query: 423 ACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA-LQRLMLQPGSVPSKVV 481
A LNG+++GD+ L V+R++ G + + IA + L + + + V+
Sbjct: 195 AIQGLNGMEVGDRKLVVQRSSTGP------MGKIGVGGTSSIAQILPLASETQAYRTNVL 248
Query: 482 CLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L +V+A+ELKDD +Y+EI ED+++E ++
Sbjct: 249 LLLNMVTAEELKDDLDYQEICEDIQEECSQYG 280
>gi|242019185|ref|XP_002430045.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
gi|212515110|gb|EEB17307.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
Length = 445
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 151/315 (47%), Gaps = 87/315 (27%)
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
V + TR ARR+YVG +P E+ + FF+Q M + G G+ V+ IN +K
Sbjct: 115 VPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNPVLACQINLDK 173
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEG---------------------------------- 319
FAF+E RS++E + AMA DGI F+G
Sbjct: 174 NFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMSENPSVNVPAGVISTVV 233
Query: 320 --APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYF 377
+P +IF+GGLP Y
Sbjct: 234 PDSP--------------------------------------------HKIFIGGLPNYL 249
Query: 378 TEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL 437
E Q++ELL SFG LR F+LV D TG SKGYAFC++ D++VTD A A LNG+++GDK L
Sbjct: 250 NEDQLKELLMSFGQLRAFNLVMDSTTGLSKGYAFCLFVDINVTDQAIAGLNGMQLGDKKL 309
Query: 438 TVRRANQGANQPKPEQESVLLHAQQQIALQRLM-LQPGSVPSKVVCLTQVVSADELKDDE 496
V+RA+ GA Q+ A QI + L + P++V+CL +V+ EL D+E
Sbjct: 310 IVQRASVGAKNTALGQQ-----APVQIQVPGLTSVGMSGPPTEVLCLLNMVTPSELNDEE 364
Query: 497 EYEEILEDMRQEGGK 511
EYE+ILED+++E K
Sbjct: 365 EYEDILEDIKEECNK 379
>gi|281207514|gb|EFA81697.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 682
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 151/305 (49%), Gaps = 39/305 (12%)
Query: 234 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
VQ+ + + +RR+YVG +PP E + FF+ + A T PG V+ I K
Sbjct: 287 VQSASAALAKQSRRLYVGNIPPNVTEAQIVEFFNAAIIAAALTTK-PGQPVLLCQITTGK 345
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
FAF+E RS EEA+ M LDGI G +K+RRP DY G ++P P G
Sbjct: 346 SFAFIEFRSSEEATLGMGLDGISLSGYSLKIRRPKDYQS------GSNEPMP------TG 393
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
L+ S + ++IF+GGLP E QI+ +L + G L+ F+LVKD +TG SKG+AFC
Sbjct: 394 LSIVSTNVPDSENKIFLGGLPPTLNEEQIKSMLSAIGRLKAFNLVKDTKTGISKGFAFCE 453
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRANQG--------------ANQPKPEQESVLLH 459
+ D TD ACA LNG K GDK+L V++A+ G + P + V
Sbjct: 454 FLDPENTDKACAELNGTKFGDKSLLVQKASLGKEAIANNNNNNNNNQSLNNPSKVKVDSS 513
Query: 460 AQQQIALQRLMLQP------------GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
+ L + Q S PS+VV L + +E++DD YE +L D +
Sbjct: 514 VSSLLNLTTALPQVLGAIRSNVSSDNNSKPSRVVQLLNMTDKEEIQDDNNYENLLLDTKD 573
Query: 508 EGGKF 512
+F
Sbjct: 574 ACEEF 578
>gi|85111663|ref|XP_964044.1| hypothetical protein NCU03039 [Neurospora crassa OR74A]
gi|28925805|gb|EAA34808.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 584
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 178/350 (50%), Gaps = 31/350 (8%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P Q GA+
Sbjct: 191 RKRRMTQWDIKPPGYGNVTAEQAKLSGMFPLPGA-PRQQAMDPTKLQAFMTQPGGAVNS- 248
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R ++R+ V +PP+A ++S+ FF+ + G N D V I+ +
Sbjct: 249 --AALKPTNSRQSKRLIVSNIPPSATDESLLGFFN--LQLNGLNVIDSADPCVQCQISPD 304
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEG---------APVKVRRPSDYNPSLAATLGPSQP 343
FA +E R+ +A+ A+ALDGI E +K+RRP DY + A +
Sbjct: 305 HSFAMLEFRNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKDY--IVPAIVEDPNY 362
Query: 344 NPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
+P+ + S+ ++ P++I V +P Y +E QI ELL +FG L+ F LVKD+ T
Sbjct: 363 DPDSEVP-------SSIVIDSPNKISVTNIPAYLSEEQIMELLVAFGKLKSFVLVKDKHT 415
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQ 463
S+G AFC Y D SVT +A LN + +GD+ L V++A+ G Q E L
Sbjct: 416 EESRGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKASYGIQQVAGE-----LSVNAM 470
Query: 464 IALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L G V S+VV L +V+ADEL D+++YEEI +D+++E KF
Sbjct: 471 SMLAGTTSLDGDV-SRVVQLLNMVTADELMDNDDYEEIRDDVQEECEKFG 519
>gi|195346998|ref|XP_002040041.1| GM15574 [Drosophila sechellia]
gi|194135390|gb|EDW56906.1| GM15574 [Drosophila sechellia]
Length = 445
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 159/295 (53%), Gaps = 28/295 (9%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP----GDAVVNVYINH 291
A TR ARR+YVG +P E+ + FF+ + A G G AV+ +
Sbjct: 97 AAISMITRQARRLYVGNIPFGVTEEEMMQFFNHRIMAQGYEAKSSHYMDGKAVLTCQTHL 156
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN------- 344
EK FAF+E RS++EA+ A+ DG+++ G +K+RRP DY P + + +
Sbjct: 157 EKNFAFLEFRSIDEATQALNFDGMVYRGQTLKIRRPHDYQPVPSISFSAMENYRSFRVPA 216
Query: 345 ------PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV 398
PN+ + + P S P++I+VGGLP + Q++ELL+SFG L+G +LV
Sbjct: 217 TTIANPPNVTIPVTTIVPDS------PNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLV 270
Query: 399 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 458
D T +KG+AF Y D VTD A A L+G+ +GD+ L V+R+ G P ++
Sbjct: 271 MDGNTSLNKGFAFFEYYDPLVTDHAIAGLHGMLLGDRRLVVQRSIPGGKNAFPGHTGPVV 330
Query: 459 HAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q+ +L PGS P++ +CL +V +EL DDEE+E+I D++QE KF
Sbjct: 331 ----QVPGISTLLDPGS-PTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFG 380
>gi|350295506|gb|EGZ76483.1| hypothetical protein NEUTE2DRAFT_76972 [Neurospora tetrasperma FGSC
2509]
Length = 592
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 178/350 (50%), Gaps = 31/350 (8%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P Q GA+
Sbjct: 199 RKRRMTQWDIKPPGYGNVTAEQAKLSGMFPLPGA-PRQQAMDPTKLQAFMTQPGGAVNS- 256
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R ++R+ V +PP+A ++S+ FF+ + G N D V I+ +
Sbjct: 257 --AALKPTNSRQSKRLIVSNIPPSATDESLLGFFN--LQLNGLNVIDSADPCVQCQISPD 312
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEG---------APVKVRRPSDYNPSLAATLGPSQP 343
FA +E ++ +A+ A+ALDGI E +K+RRP DY + A +
Sbjct: 313 HSFAMLEFKNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKDY--IVPAIVEDPNY 370
Query: 344 NPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
+P+ + S+ ++ P++I V +P Y +E QI ELL +FG L+ F LVKD+ T
Sbjct: 371 DPDSEVP-------SSIVIDSPNKISVTNIPAYLSEEQIMELLVAFGKLKSFVLVKDKHT 423
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQ 463
S+G AFC Y D SVT +A LN + +GD+ L V++A+ G Q E L
Sbjct: 424 EESRGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKASYGIQQVAGE-----LSVNAM 478
Query: 464 IALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L G V S+VV L +V+ADEL D+++YEEI +D+++E KF
Sbjct: 479 SMLAGTTSLDGDV-SRVVQLLNMVTADELMDNDDYEEIRDDVQEECEKFG 527
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 177/350 (50%), Gaps = 31/350 (8%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P Q G +
Sbjct: 201 RKRRMTQWDIKPPGYGNVTAEQAKLSGMFPLPGA-PRQQAMDPTKLQAFMTQPGGTVNS- 258
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R ++R+ V +PP+A ++S+ FF+ + G N D V I+ +
Sbjct: 259 --TALKPTNSRQSKRLIVSNIPPSATDESLLGFFN--LQLNGLNVIDSVDPCVQCQISPD 314
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAP---------VKVRRPSDYNPSLAATLGPSQP 343
FA VE R+ +A+ A+ALDGI E +K+RRP DY + A +
Sbjct: 315 HSFAMVEFRNSPDATVALALDGITMEADDANDAASAGGLKIRRPKDY--IVPAIVEDPNY 372
Query: 344 NPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
+P+ + + + ++ P++I V +P Y TE QI ELL +FG L+ F LVKD+ T
Sbjct: 373 DPDSEVPSNIV-------IDSPNKISVTNIPAYLTEEQIMELLVAFGKLKSFVLVKDKHT 425
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQ 463
S+G AFC Y D SVT +A LN + +GD+ L V++A+ G Q E L
Sbjct: 426 EESRGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKASYGIQQVAGE-----LSVNAM 480
Query: 464 IALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L G V S+VV L +V+ADEL D+++YEEI +D+++E KF
Sbjct: 481 SMLAGTTSLDGDV-SRVVQLLNMVTADELMDNDDYEEIRDDVQEECEKFG 529
>gi|346978171|gb|EGY21623.1| splicing factor U2AF 50 kDa subunit [Verticillium dahliae VdLs.17]
Length = 589
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 218/451 (48%), Gaps = 65/451 (14%)
Query: 96 REKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQS 155
RE++RE RDR ER +R RD R R D D+ + R R ++
Sbjct: 79 REREREDRYSGRDRRAERDWDRDRGSSRRDARRDDDDRGVRRGGDRDQFDDRRRGGRDRN 138
Query: 156 RSRGRSEHRSRSRSRSRSK----------------SKRISGFDMAPPASAMLAAGAGAAA 199
R E R RS S K +R++ +D+ PP + A A
Sbjct: 139 DEFARREQRPRSASPPPKKREPTPDLTDIVSVLDRKRRLTQWDIKPPGYENVTA-EQAKL 197
Query: 200 AGQIPGANPAIPGMFPNMFPL--VTGQQFGALP-VMPVQAMTQQATRHARRVYVGGLPPT 256
+G P +PG P P+ Q F P + ++ +R A+R+ V LP +
Sbjct: 198 SGMFP-----LPGA-PRQQPMDPTKLQAFMNQPGTVNSASLKPSNSRQAKRLLVSKLPSS 251
Query: 257 ANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 316
A E SVA+FF+ + G N D V+ ++++K F VE R+ EA+ A+ALDGI
Sbjct: 252 ATEDSVASFFN--LQLNGLNVIESTDPCVSCQLSNDKSFCVVEFRNASEATVALALDGIS 309
Query: 317 FE---------GAPVKVRRPSDY-NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPD 366
E G +++RRP DY P++ L P +P G+ S+ ++ P+
Sbjct: 310 MEADSATDGAAGRGLEIRRPKDYIVPAVTEEL-PYEP---------GVV--SSNVVDTPN 357
Query: 367 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 426
++ + G P Y TE Q+ ELL SFG L+ F LV+DR T S+G+ FC Y D + D+A
Sbjct: 358 KLSITGFPPYLTEEQVTELLTSFGELKAFVLVRDRHTDESRGFVFCEYVDSAANDVAIQG 417
Query: 427 LNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-----SKVV 481
L+G+ +G+ L +++A+ G Q A ++ + + + G+ S+V+
Sbjct: 418 LSGMDLGNSKLKIQKASIGVTQ----------VAGVEMGVAAMSMLAGTTATDSEESRVL 467
Query: 482 CLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L +V+ADEL D+E+YEEI+ED+++E K+
Sbjct: 468 QLLNMVTADELMDNEDYEEIVEDVQEECAKY 498
>gi|397633851|gb|EJK71162.1| hypothetical protein THAOC_07424, partial [Thalassiosira oceanica]
Length = 449
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 147/270 (54%), Gaps = 44/270 (16%)
Query: 193 AGAGAAAAGQIPGANPA-IPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVG 251
GA +A G G PA + G F NM P TRHARR+Y+G
Sbjct: 205 TGATSAHGGLNGGFTPAPVAGSFANMNP--------------------NQTRHARRLYIG 244
Query: 252 GLPPTANEQSVATFF------SQVMAAIGGNTAG------PGDAVVNVYINHEKKFAFVE 299
+P + E + +FF S +M N A D +V+VYIN E++FAF+E
Sbjct: 245 NIPDIS-ETEIHSFFRKTIEKSLIMNRDDKNYAQLQEEYIANDPIVSVYINRERRFAFIE 303
Query: 300 MRSVEEASNAMALDGIIFEG-APVKVRRPSDYNPSLAATLGPSQPN-PNLNLAAVGLTPG 357
R+++ + ++LDGI EG VKV+RP+DYN SLA P N +L+ A +GL
Sbjct: 304 FRTMDITTACLSLDGIDVEGRGKVKVKRPNDYNASLA----PQTSNGVSLDTAKLGLVSS 359
Query: 358 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETG-NSKGYAFCVYQD 416
+ +GP++IF+GGLPY+ TE+Q+ ELL +FG +R F LVK + SKGY F Y D
Sbjct: 360 TVP--DGPNKIFIGGLPYHLTESQVLELLGAFGSVRAFHLVKSEPSATTSKGYCFVEYAD 417
Query: 417 LSVTDIACAALNGIKM-GDKTLTVRRANQG 445
++T +AC LNG+ + G K L+ R A QG
Sbjct: 418 PNITQVACMGLNGMDLGGGKQLSCRMAVQG 447
>gi|296420976|ref|XP_002840043.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636253|emb|CAZ84234.1| unnamed protein product [Tuber melanosporum]
Length = 540
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 151/279 (54%), Gaps = 30/279 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R A+R+ + +PP +E+S+ FF+Q ++++ T GP D + +V ++ K +E +
Sbjct: 220 SRQAKRLLMSNIPPGTDEESLLQFFNQTLSSLNVTTGGP-DPITSVQLSGSKILGLLEFK 278
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG--SA 359
+ +A+ +AL GI F G ++++RP DY + P P + + PG S+
Sbjct: 279 NTNDATVCLALSGIEFNGGNIEIKRPRDY-------IVPIVPEDHRHQE-----PGVISS 326
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+ P++I + +P Y + Q+ ELL+SFG L+ F LVKD SKG AFC Y D
Sbjct: 327 DVPDTPNKILISEIPEYLQDEQVIELLKSFGDLKAFVLVKDVTDETSKGIAFCEYLDPGT 386
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV--- 476
T+IA LN +++ D TL VRRA+ G Q A ++ + + + G+
Sbjct: 387 TEIAVEGLNAMEIADNTLRVRRASIGMKQ----------AAGVEMGVNAMAMMAGTTSVD 436
Query: 477 --PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+V+ L +V+ADEL D EEY+EI ED+R E KF
Sbjct: 437 LEASRVLQLLNMVTADELLDPEEYDEICEDIRDECQKFG 475
>gi|380481793|emb|CCF41637.1| U2 snRNP auxilliary factor [Colletotrichum higginsianum]
Length = 550
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 173/356 (48%), Gaps = 45/356 (12%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA---NPAIPGMFPNMFPLVTGQQFGAL 229
+ +R++ +D+ PP + A A + +PGA P P + GQ A
Sbjct: 157 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGAPRQQPIDPSKLQAIMNQPGGQVNSA- 215
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
A+ +R A+R+ + LPP+A E+S+ +FF+ + G N D + +
Sbjct: 216 ------ALKPSNSRQAKRLLINNLPPSATEESIQSFFN--LQLNGLNIIESADPCTSCQV 267
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEG----------APVKVRRPSDYNPSLAATLG 339
+ + FA VE R+ EA+ A+ALDGI E + + RP DY
Sbjct: 268 SKDNSFAVVEFRNASEATIALALDGISMEADDATNGEAANQGLSIHRPKDYIVPAVVDDV 327
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
P +P N+ ++ P ++ + LP Y ++ Q+ ELL SFG L+ F LV+
Sbjct: 328 PYEPGVVSNVV-----------IDTPSKLSIANLPTYLSDEQVSELLVSFGELKAFVLVR 376
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
DR T S+G AFC Y D + TD+A LNG+ +GDK L V++A+ G Q +
Sbjct: 377 DRSTEESRGIAFCEYVDPAATDVAIQGLNGMDLGDKKLRVQKASVGVTQ--------VAG 428
Query: 460 AQQQIALQRLMLQPGSVPS---KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ +A ++ S S +V+ L +V+ +EL D+++YEEI ED+++E KF
Sbjct: 429 VEMGVAAMSMLAGTTSTDSGETRVLQLLNMVTPEELMDNDDYEEIKEDVQEECSKF 484
>gi|321479007|gb|EFX89963.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Daphnia pulex]
Length = 487
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 147/274 (53%), Gaps = 52/274 (18%)
Query: 252 GLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA 311
G P A + IN +K FAF+E RS++E S AMA
Sbjct: 179 GHPILACQ-----------------------------INLDKNFAFLEFRSIDETSQAMA 209
Query: 312 LDGIIFEGAPVKVRRPSDYN----PSLAATLGPSQPNPNLNLAAVGLTPGSAGGL----- 362
DGI F+G +K+RRP DY+ G P +++ G+T AGG
Sbjct: 210 FDGINFKGQTLKIRRPHDYHPTPGGGGGGGGGGGGPETTPGMSSGGITEKRAGGGGGGGG 269
Query: 363 --------EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
+ P ++F+GGLP Y E Q ELL SFG LR F+LVKD TG SKGYAFC Y
Sbjct: 270 GTMSTIVPDTPHKLFIGGLPNYLNEEQ--ELLMSFGQLRAFNLVKDTATGLSKGYAFCEY 327
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPG 474
D++VTD A + LNG+++GDK + ++RA+ GA + + Q Q+ L PG
Sbjct: 328 ADVTVTDQAISGLNGMQLGDKKIIIQRASVGAKNAAAYAQ---MPVQIQVPGFNLAAGPG 384
Query: 475 SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
P++V+CL +V+ +EL+DDEEYEEI++D+R+E
Sbjct: 385 Q-PTEVLCLLNMVTPEELRDDEEYEEIVDDIREE 417
>gi|310793965|gb|EFQ29426.1| U2 snRNP auxilliary factor [Glomerella graminicola M1.001]
Length = 549
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 176/354 (49%), Gaps = 39/354 (11%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ + Q G +
Sbjct: 156 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGAPRQQP-MDPSKLQAIMNQPGGQVNSA 214
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R A+R+ + LPP+A E+ + FF+ + G N D + ++ +
Sbjct: 215 ---ALKPSNSRQAKRLLINNLPPSATEEGIQNFFN--LQLNGLNIIESTDPCTSCQVSKD 269
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE------GAP----VKVRRPSDYNPSLAATLGPSQ 342
FA VE R+ EA+ A+ALDGI E GA + +RRP DY P +
Sbjct: 270 HSFAVVEFRNASEATVALALDGISMEAEDATNGAAADQGLVIRRPKDYIVPAVVDDVPYE 329
Query: 343 PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRE 402
P N+ ++ ++I V +P Y +E Q+ ELL SFG L+ F LV+D+
Sbjct: 330 PGVVSNVV-----------VDTHNKISVANMPVYLSEEQVSELLVSFGELKAFVLVRDKS 378
Query: 403 TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQ 462
T S+G AFC Y D + TD+A LNG+ +GDK L V++A+ G Q + +
Sbjct: 379 TEESRGIAFCEYVDPAATDVAIQGLNGMDLGDKRLKVQKASVGVTQ--------VAGVEM 430
Query: 463 QIALQRLMLQPGSVPS---KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+A ++ S S +V+ L +V+ +EL D+++YEEI ED+++E KF
Sbjct: 431 GVAAMSMLAGTTSTDSEETRVLQLLNMVTPEELMDNDDYEEIKEDVQEECAKFG 484
>gi|344251408|gb|EGW07512.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 422
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 131/214 (61%), Gaps = 9/214 (4%)
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAG 360
RSV+E + AMA DGIIF+G +K+RRP DY P + PS P + V P SA
Sbjct: 26 RSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA- 81
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VT
Sbjct: 82 -----HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVT 136
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKV 480
D A A LNG+++GDK L V+RA+ GA + Q L +Q G P++V
Sbjct: 137 DQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEV 196
Query: 481 VCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
+CL +V +EL DDEEYEEI+ED+R E K+
Sbjct: 197 LCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGL 230
>gi|328865493|gb|EGG13879.1| RapGAP/RanGAP domain-containing protein [Dictyostelium fasciculatum]
Length = 3032
Score = 156 bits (394), Expect = 3e-35, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 9/211 (4%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN-TAGPGDAVVNVYINHEKKFAFV 298
Q + +RR+Y+G +PP + ++ FF+ + A + ++ G V++ IN K FAF+
Sbjct: 2570 QQNKQSRRLYIGNIPPNITDNTLIDFFNTAITAANLHLSSKTGPVVLSCQINSAKNFAFL 2629
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
E RS EEA+NAM LDGI +K+RRP+DY P + PS P V ++ S
Sbjct: 2630 EFRSAEEATNAMGLDGISLFTFSLKIRRPTDYQPPANESSMPSAP--------VSMSIVS 2681
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
+ ++IF+GG+P E QI+ +L +FG L+ F+LVKD +TG+SKGYAFC Y +
Sbjct: 2682 TNVPDSENKIFIGGIPTTLNEEQIKSMLLAFGRLKAFNLVKDPKTGSSKGYAFCEYYETE 2741
Query: 419 VTDIACAALNGIKMGDKTLTVRRANQGANQP 449
T+ LNG K G+K+L V+R++ G P
Sbjct: 2742 ETNDCINGLNGTKFGEKSLVVQRSSVGTKDP 2772
>gi|224003073|ref|XP_002291208.1| U2 snRNP auxillary splicing factor, U2AF subunit [Thalassiosira
pseudonana CCMP1335]
gi|220972984|gb|EED91315.1| U2 snRNP auxillary splicing factor, U2AF subunit, partial
[Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 160/296 (54%), Gaps = 35/296 (11%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG-----------DAVVNVYIN 290
TRHARR+YVG +P ++EQ F + ++I + D +++VYIN
Sbjct: 1 TRHARRLYVGNIPDVSDEQLHHFFRDAIRSSIILDNNSEAHSSHKHQYVDNDPIISVYIN 60
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEG-APVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
E++FAF+E +++E + MALDG+ G VK++RP+DYNP++A L S P L+
Sbjct: 61 RERRFAFLEFKTMEITTACMALDGLDVMGRGKVKIKRPNDYNPAVAPMLNAST-MPVLDT 119
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK-DRETGNSKG 408
+G+ S +GP++IFVGGLPY+ ++Q+ ELL +FG ++ F+LVK D + SKG
Sbjct: 120 GKLGII--SMTVHDGPNKIFVGGLPYHLVDSQVLELLSAFGAVKAFNLVKNDPMSDTSKG 177
Query: 409 YAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQR 468
Y F Y D +VT IA LNG+ MG Q QP ++ + + AL +
Sbjct: 178 YCFVEYCDPNVTQIAAMGLNGMDMGG-------GKQPYQQPIVVKDPMAVANAAASALDQ 230
Query: 469 LM------------LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
PGS ++++ L +V ++L E+ + + E++R+E GK+
Sbjct: 231 AFGSGGVPPLAPPTAMPGSTVTRILVLLNMVMDEDLATAEDRKFLEEEVREEVGKY 286
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 185/382 (48%), Gaps = 44/382 (11%)
Query: 146 EDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR-ISGFDMAPPA-SAMLAAGAGAAAAGQI 203
E R RRS S + + + S+ KR ++ +D+ PP ++ A A + +
Sbjct: 151 EARQPRRSPSPPKVKEPTPDLTDIIPVSERKRRLTMWDIKPPGYESVTAEQAKLSGMFPL 210
Query: 204 PGA------NPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTA 257
PGA +P+ F N P + G+ P P A+ +R A+R+ LPP
Sbjct: 211 PGAPRQTALDPSRMAAFVNHPP-----KEGSTP-QPT-ALKPSNSRQAKRLLCQNLPPMC 263
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
E+++ +FFS + ++ + ++ VY+N A +E RS A+ +A DG+ F
Sbjct: 264 TEETIYSFFSSFLKSLNA-VDSENEPLITVYLNPTGTMAMLEFRSTAYATLCLAFDGMEF 322
Query: 318 EGAPVKVR--RPSDY-----NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFV 370
+ VK+R RP DY + S + G PN P S ++I V
Sbjct: 323 DDTEVKIRLSRPKDYIIPQYSESSESHNGDISPN----------VPDSI------NKICV 366
Query: 371 GGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGI 430
+P + + Q+ ELL++FGPL+ F LVKD+E SKG AFC Y D ++ +IA LNG+
Sbjct: 367 SNIPTHLADQQVMELLQTFGPLKSFFLVKDKEMDESKGVAFCEYLDPNIAEIAIEGLNGL 426
Query: 431 KMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSAD 490
+ ++ L V+RA+ G Q + + A IA G +V+ L +V+AD
Sbjct: 427 DINEQLLNVKRASIGVKQSAGAEAGI--PAMTVIAATTSAEMEG---GRVLQLLNMVTAD 481
Query: 491 ELKDDEEYEEILEDMRQEGGKF 512
EL D EEYEEILED+ E KF
Sbjct: 482 ELLDQEEYEEILEDVTDECNKF 503
>gi|307106531|gb|EFN54776.1| hypothetical protein CHLNCDRAFT_58050 [Chlorella variabilis]
Length = 354
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 102/153 (66%), Gaps = 15/153 (9%)
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
G + +RIF+GGLPYY TE Q RELL SFG ++ FDLVKD+ETG SKGY FCVY+D VT
Sbjct: 150 GADAAERIFIGGLPYYLTEEQCRELLASFGAIKSFDLVKDKETGQSKGYGFCVYEDPRVT 209
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKV 480
D+AC LNG++MGD+TLTVRRA +G Q +++ + ++V
Sbjct: 210 DVACQGLNGMRMGDRTLTVRRATEGQRQQAEQKQQDMYVGN---------------TARV 254
Query: 481 VCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
V L+ V+ +EL DD+EY +I+EDM++E GK+
Sbjct: 255 VKLSHAVTLEELGDDQEYGDIMEDMKEECGKYG 287
>gi|308477324|ref|XP_003100876.1| CRE-UAF-1 protein [Caenorhabditis remanei]
gi|308264450|gb|EFP08403.1| CRE-UAF-1 protein [Caenorhabditis remanei]
Length = 496
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 144/285 (50%), Gaps = 71/285 (24%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P++ Q I
Sbjct: 220 PILLCQ-----------------------------------------------------I 226
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
N +K FAF+E RS++E + MA DGI F G +KVRRP DY PSQ ++N
Sbjct: 227 NLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQ--------PSQNTFDMN- 277
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
P S+ ++ P++IF+GGLP Y TE Q++ELL SFGPL+ F L D + GNSKGY
Sbjct: 278 ---ARMPVSSIVVDSPNKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNMDSQ-GNSKGY 333
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRL 469
AF Y D ++TD A A LNG+++GDK L V+ A ANQ + + L ++ IA L
Sbjct: 334 AFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLAC--ANQTR--HNTHLPNSASAIAGIDL 389
Query: 470 MLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
G ++++CL +V+ DEL+ DE+YEEILED+R+E K+
Sbjct: 390 SQGAGRA-TEILCLMNMVTEDELRSDEDYEEILEDVREECSKYGI 433
>gi|171684585|ref|XP_001907234.1| hypothetical protein [Podospora anserina S mat+]
gi|170942253|emb|CAP67905.1| unnamed protein product [Podospora anserina S mat+]
Length = 585
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 180/358 (50%), Gaps = 50/358 (13%)
Query: 176 KRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPV 234
+R++ +D+ PP + A A + +PGA P M P Q GA+
Sbjct: 191 RRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGA-PRQQAMDPTKLQAFMSQPGGAVNS--- 246
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
A+ +R A+R+ + +P +A + S+ FF+ + G N D + I+ ++
Sbjct: 247 AALKPTNSRQAKRLILSNIPASATDDSIVNFFN--LQLNGLNVIEQTDPCLLCNISPDRS 304
Query: 295 FAFVEMRSVEEASNAMALDGIIFE---------GAP---VKVRRPSDY-NPSLA--ATLG 339
FA +E R+ +A+ A+ALDGI + GA +K+RRP DY P++
Sbjct: 305 FAMLEFRNNTDATVALALDGITMDADDHQANGNGAAATGLKIRRPKDYIVPAIVEDPNYD 364
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
P P+ N+ ++GP++I V +P Y TE Q+ ELL SFG L+ F VK
Sbjct: 365 PDSSVPSTNV------------VDGPNKISVTNIPPYLTEDQVMELLVSFGKLKSFVFVK 412
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D T +G AF Y D SVTD+A + LN + +G+K L V++A+ G Q
Sbjct: 413 DNGTQEPRGIAFLEYADSSVTDVAISGLNNMMLGEKALKVQKASIGITQ----------- 461
Query: 460 AQQQIALQRLMLQPGSVPS-----KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++++ + + G+ PS +V+ L +V+ADEL D+++YEEI +D+++E KF
Sbjct: 462 VAGELSVNAMSMLAGTTPSDNDAGRVLQLLNMVTADELMDNDDYEEIRDDVQEECEKF 519
>gi|401402634|ref|XP_003881297.1| rna recognition motif (RRM)-containing protein,related [Neospora
caninum Liverpool]
gi|325115709|emb|CBZ51264.1| rna recognition motif (RRM)-containing protein,related [Neospora
caninum Liverpool]
Length = 555
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 125/214 (58%), Gaps = 23/214 (10%)
Query: 251 GGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM 310
G LP + V +F++++ ++ PGD +V+VY+N ++FAF+E RS+EEA+ +
Sbjct: 16 GNLPVPVTQGEVQQYFNELLNSLLPQKV-PGDTIVHVYVNPARRFAFLEHRSIEEANFTL 74
Query: 311 ALDGIIFEGAPVKVRRPSDYNPSLA--------ATLG---------PSQPNPNLNLAAVG 353
LDG+ + + +RRP DYNP+LA A LG PSQ A
Sbjct: 75 GLDGVSWRNCALSLRRPQDYNPTLADQQYREERARLGSMTGFAVPPPSQAATPAAPAESS 134
Query: 354 LTPGSAGGL-----EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKG 408
L G+ G + + P +IF+GGLP+ TE ++LLE+FG LR +VKD++ G+ KG
Sbjct: 135 LIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRALHVVKDQQRGDCKG 194
Query: 409 YAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
+AFC Y D +VTD+A A LN +++ D+ L VRRA
Sbjct: 195 FAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRA 228
>gi|154319442|ref|XP_001559038.1| hypothetical protein BC1G_02202 [Botryotinia fuckeliana B05.10]
Length = 596
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 179/356 (50%), Gaps = 42/356 (11%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q F A P
Sbjct: 200 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSKL-----QAFMAQPSG 253
Query: 233 PVQ--AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
V A+ +R ++R+ V +P E+++ +FF+ + G N D +++ ++
Sbjct: 254 QVTNAALKPSNSRQSKRLLVHNIPADTKEETIVSFFN--LQLNGLNVIEGSDPLISAQVS 311
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEGAP-------------VKVRRPSDYNPSLAAT 337
+ FA +E ++ +A+ A+ALDGI +G + +RRP DY
Sbjct: 312 KDGSFALLEFKTQSDATVALALDGITMDGNDHMETENGSADTRGLSIRRPKDYIVPAVTD 371
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
P +P N+ A + ++I V +P+Y + Q+ ELL SFG L+ F L
Sbjct: 372 ETPFEPGVISNVVA-----------DTQNKISVTNIPHYLNDEQVTELLVSFGELKAFVL 420
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD T S+G AFC Y D + TDIA LNG+++GDK L V+RA+ G Q + SV
Sbjct: 421 VKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQRASIGNTQVSGLEMSV- 479
Query: 458 LHAQQQIA-LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+A +A L+ G +V+ L +V+ +EL D+E+YEEI ED+++E K+
Sbjct: 480 -NAMSMLAGTTSQDLENG----RVLQLLNMVTPEELIDNEDYEEICEDVKEECEKY 530
>gi|347842431|emb|CCD57003.1| hypothetical protein [Botryotinia fuckeliana]
Length = 606
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 179/357 (50%), Gaps = 42/357 (11%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q F A P
Sbjct: 210 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSKL-----QAFMAQPSG 263
Query: 233 PVQ--AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
V A+ +R ++R+ V +P E+++ +FF+ + G N D +++ ++
Sbjct: 264 QVTNAALKPSNSRQSKRLLVHNIPADTKEETIVSFFN--LQLNGLNVIEGSDPLISAQVS 321
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEGAP-------------VKVRRPSDYNPSLAAT 337
+ FA +E ++ +A+ A+ALDGI +G + +RRP DY
Sbjct: 322 KDGSFALLEFKTQSDATVALALDGITMDGNDHMETGNGSADTRGLSIRRPKDYIVPAVTD 381
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
P +P N+ A + ++I V +P+Y + Q+ ELL SFG L+ F L
Sbjct: 382 ETPFEPGVISNVVA-----------DTQNKISVTNIPHYLNDEQVTELLVSFGELKAFVL 430
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD T S+G AFC Y D + TDIA LNG+++GDK L V+RA+ G Q + SV
Sbjct: 431 VKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQRASIGNTQVSGLEMSV- 489
Query: 458 LHAQQQIALQRLM-LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+A +A L+ G +V+ L +V+ +EL D+E+YEEI ED+++E K+
Sbjct: 490 -NAMSMLAGTTSQDLENG----RVLQLLNMVTPEELIDNEDYEEICEDVKEECEKYG 541
>gi|367020820|ref|XP_003659695.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
gi|347006962|gb|AEO54450.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
Length = 567
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 177/358 (49%), Gaps = 45/358 (12%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P GA+
Sbjct: 170 RKRRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGA-PRQQAMDPTKLQAFMNHPGGAVNS- 227
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R ++R+ V LPP+A E+S+ FF+ + G N D + +I +
Sbjct: 228 --AALKPTNSRQSKRLIVSNLPPSATEESLVNFFN--LQLNGLNVIETADPCLQAHIAPD 283
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAP-------------VKVRRPSDYNPSLAATLG 339
+ FA +E R +A+ A+ALDGI E + +RRP DY + A +
Sbjct: 284 RSFAMLEFRHNTDATVALALDGITMEAEDADAANGNGAATQGLHLRRPKDY--IVPAVVE 341
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
+P+ + TP S L+ P++I V LP Y T+ Q+ ELL SFG L+ F LVK
Sbjct: 342 DPNYDPDSD------TPSSVV-LDSPNKISVTNLPLYLTDDQVMELLVSFGKLKSFVLVK 394
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D T S+G AF Y D S T++A LN + +G++ L V++A+ G Q
Sbjct: 395 DNGTQESRGIAFLEYADPSATNVAVQGLNNMMLGERALKVQKASIGITQ----------- 443
Query: 460 AQQQIALQRLMLQPGSVP-----SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++ + + + G++ S+V+ L +V+ +EL D+++YEEI ED+++E KF
Sbjct: 444 VSGEMGVNAMSMLAGTMSADAGGSRVLQLLNMVTPEELMDNDDYEEIREDVQEECQKF 501
>gi|241166827|ref|XP_002409934.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
gi|215494685|gb|EEC04326.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
Length = 444
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 155/283 (54%), Gaps = 25/283 (8%)
Query: 242 TRHARRVYVGGLPPTANEQS--------VATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 293
TR ARR+YVG +P +E S + +F+ M A G + A PG+ V+ IN +K
Sbjct: 112 TRQARRLYVGNIPFGCSEASRPLLLREEMMDYFNAQMHACGFSQA-PGNPVLACQINLDK 170
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
FAF+E+ +++ P V P LG P +G
Sbjct: 171 NFAFLEVSALDTDLGTPC--------CPTFVLYDYLSPPFSGNCLGAGNGTPGDTW--LG 220
Query: 354 LTPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
G + + P +IF+GGLP Y E Q+RELL SFG LR F+LVKD TG SKGYAF
Sbjct: 221 FLSGVISTVVQDSPHKIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGYAF 280
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLML 471
C Y +++ TD A LNG+++GDK L V+RA+ GA K Q +V A QI + L L
Sbjct: 281 CEYVEVTTTDQAIMGLNGMQLGDKKLIVQRASVGA---KNSQMNVSRDAPVQIQVPGLQL 337
Query: 472 QPGS-VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
Q G+ P++V+CL +V +ELKD+EEYE+ILED+ +E K+
Sbjct: 338 QGGAGPPTEVLCLMNLVCPEELKDEEEYEDILEDIHEECNKYG 380
>gi|406867695|gb|EKD20733.1| U2 snRNP auxilliary factor [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 613
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 179/370 (48%), Gaps = 52/370 (14%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q G++
Sbjct: 201 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSKLQAFMSQPSGSVTN- 258
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R A+R+ V LPPT NE+++ FF+ + G N D V+ I+ +
Sbjct: 259 --AALKPSNSRQAKRLLVSNLPPTVNEEAIVNFFN--LQLNGLNVIEGSDPCVSAQISKD 314
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE-----GAP-------VKVRRPSDYNPSLAATLGP 340
K FA +E + +A+ A+ALDGI E G+ + +RRP DY + T+
Sbjct: 315 KTFALLEFKQTSDATIALALDGITMEDEHMNGSATNGDTQGLSIRRPKDY---IVPTITD 371
Query: 341 SQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
P ++ V + + ++I + +P Y T+ Q+ ELL SFG L+ F LVKD
Sbjct: 372 ETPFEAGVISNVVV--------DTQNKISISNIPLYLTDEQVTELLVSFGELKAFVLVKD 423
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
T S+G AFC Y D TDIA LNG+++GDK L V+RA+ G Q + SV +A
Sbjct: 424 NGTDESRGIAFCEYVDPVATDIAVEGLNGMELGDKHLKVQRASIGHTQVSGLEMSV--NA 481
Query: 461 QQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE-----------------EILE 503
+A G +V+ L +V+ +EL D+E+YE EI E
Sbjct: 482 MSMLAGTT---SQGLEEGRVLQLLNMVTPEELIDNEDYEGTILLTTLIQSLLTMYPEICE 538
Query: 504 DMRQEGGKFA 513
D+++E K+
Sbjct: 539 DVKEECEKYG 548
>gi|403331270|gb|EJY64574.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 565
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 7/213 (3%)
Query: 244 HARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSV 303
H+RR+YVGG+P + ++ V F +Q + GG GD V+ N EK++ F+E+RSV
Sbjct: 188 HSRRLYVGGVPTSQSDVQVVQFLTQTLRKAGG-ILEEGDPVIKSQNNPEKRYTFLELRSV 246
Query: 304 EEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLE 363
EEAS + LDGI F + +++RRP DY+ P +P P ++ AA+G+ S E
Sbjct: 247 EEASTMIQLDGIKFMDSTLRIRRPEDYDKYPQIP--PRRPIPQIDTAALGII--STKVEE 302
Query: 364 GPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 423
P +IFVGGLP F E QI+ LL +G L+ F LVK S+G+AFC Y D A
Sbjct: 303 TPLKIFVGGLPKEFNEEQIKNLLLRYGQLKSFHLVKHTNIDQSRGFAFCEYTDEKGVQNA 362
Query: 424 CAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LNG+K+G +++ VRR GA+ +Q +
Sbjct: 363 IQFLNGLKIGSRSINVRRT--GASTSTVQQNQI 393
>gi|154280004|ref|XP_001540815.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412758|gb|EDN08145.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 47/362 (12%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P + P+ Q F P
Sbjct: 168 RKRRLTQWDIKPPGYEHVTAEQAKLSGMFPLPGA-PRQQAVDPSRL-----QAFIHPPTT 221
Query: 233 PVQAMTQQAT-------RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
T T R A+R++V LP +A E+S+ FF+ + G N D V
Sbjct: 222 STAPGTSTNTVLKPSNSRQAKRLFVHNLPSSATEESLVQFFN--LQLNGLNVIKGVDPCV 279
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFE---------------GAPVKVRRPSDY 330
++++K FA VE R+ + + A+A DGI E + +RRP DY
Sbjct: 280 TAQLSNDKTFALVEFRNAADTTVALAFDGITMEDNDEMDTTNGNSNGSNQGLSIRRPKDY 339
Query: 331 NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFG 390
A P Q N+ + P++I V +P + E + LL SFG
Sbjct: 340 ILPSAVEGEPHQEGVVSNVVP-----------DSPNKICVSNIPPFIEEEPVTMLLVSFG 388
Query: 391 PLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK 450
L+ F LVKD ETG S+G AFC Y+D TDIA LNG+++G+K L V RA+ G
Sbjct: 389 ELKSFVLVKDSETGESRGIAFCEYRDPMSTDIAVENLNGMELGNKKLKVVRASIGTT--- 445
Query: 451 PEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
Q + L +++ S+V+ L +V+ +EL D+++YEEI +D+R E
Sbjct: 446 --QAAGLDMGVNAMSMYAKTTSQDIEASRVLQLLNMVTTEELIDNDDYEEICDDVRDECS 503
Query: 511 KF 512
K+
Sbjct: 504 KY 505
>gi|240279650|gb|EER43155.1| splicing factor u2af large subunit [Ajellomyces capsulatus H143]
gi|325092783|gb|EGC46093.1| splicing factor u2af large subunit [Ajellomyces capsulatus H88]
Length = 572
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 52/365 (14%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P + P+ Q F P
Sbjct: 168 RKRRLTQWDIKPPGYEHVTAEQAKLSGMFPLPGA-PRQQAVDPSRL-----QAFIHPPTT 221
Query: 233 PVQA--------MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 284
A + +R A+R++V LP +A E+S+ FF+ + G N D
Sbjct: 222 TSTAPGTSTNTVLKPSNSRQAKRLFVHNLPSSATEESLVQFFN--LQLNGLNVIKGVDPC 279
Query: 285 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE---------------GAPVKVRRPSD 329
V ++++K FA +E R+ + + A+A DGI E + +RRP D
Sbjct: 280 VTAQLSNDKTFALLEFRNAADTTVALAFDGITMEDNDEMDTTNGDSNGSNQGLSIRRPKD 339
Query: 330 YNPSLAATLGPS--QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 387
Y + PS + PN + P S P++I V +P + E + LL
Sbjct: 340 Y-------ILPSAVEGEPNQEGVVSNVVPDS------PNKICVSNIPPFIEEEPVTMLLV 386
Query: 388 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN 447
SFG L+ F LVKD ETG S+G AFC Y+D TDIA LNG+++G+K L V RA+ G
Sbjct: 387 SFGELKSFVLVKDSETGESRGIAFCEYRDPMSTDIAVENLNGMELGNKKLKVVRASIGTT 446
Query: 448 QPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
Q + L +++ S+V+ L +V+ +EL D+++YEEI +D+R
Sbjct: 447 -----QAAGLDMGVNAMSMYAKTTSQDIEASRVLQLLNMVTTEELIDNDDYEEICDDVRD 501
Query: 508 EGGKF 512
E K+
Sbjct: 502 ECSKY 506
>gi|429854658|gb|ELA29655.1| splicing factor u2af large subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 559
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 39/339 (11%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ + Q G +
Sbjct: 166 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGAPRQQP-MDPSKLQAIMNQPGGQVNS- 223
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R A+R+ + LPP+A E S+ FF+ + G N D + ++ +
Sbjct: 224 --AALKPSNSRQAKRLLINNLPPSATEDSIVGFFN--LQLNGLNVIESTDPCTSCQLSKD 279
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE------GAP----VKVRRPSDYNPSLAATLGPSQ 342
FA VE R+ EA+ A+ALDGI E GA + +RRP DY P +
Sbjct: 280 HSFAVVEFRNASEATVALALDGITMEADDATNGAAGSNGLVIRRPKDYIVPAVVDDVPYE 339
Query: 343 PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRE 402
P N+ ++ P++I + +P Y ++ Q+ ELL SFG L+ F LV+D+
Sbjct: 340 PGVVSNIV-----------IDTPNKISIANMPPYLSDEQVTELLVSFGELKAFVLVRDKS 388
Query: 403 TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQ 462
T S+G AFC Y + S TD+A LNG+ +GDK L V++A+ G Q + +
Sbjct: 389 TEESRGIAFCEYVEPSATDVAIQGLNGMDLGDKKLRVQKASVGVTQ--------VAGVEM 440
Query: 463 QIALQRLMLQPGSVPS---KVVCLTQVVSADELKDDEEY 498
+A ++ S S +V+ L +V+ +EL D+++Y
Sbjct: 441 GVAAMSMLAGTTSTDSEETRVLQLLNMVTPEELMDNDDY 479
>gi|225562835|gb|EEH11114.1| splicing factor u2af large subunit [Ajellomyces capsulatus G186AR]
Length = 571
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 168/362 (46%), Gaps = 47/362 (12%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P + P+ Q F P
Sbjct: 168 RKRRLTQWDIKPPGYEHVTAEQAKLSGMFPLPGA-PRQQAVDPSRL-----QAFIHPPTT 221
Query: 233 PVQAMTQQAT-------RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
T T R A+R++V LP +A E+S+ FF+ + G N D V
Sbjct: 222 STAPGTSTNTVLKPSNSRQAKRLFVHNLPSSATEESLVQFFN--LQLNGLNVIKGVDPCV 279
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFE---------------GAPVKVRRPSDY 330
++++K FA +E R+ + + A+A DGI E + +RRP DY
Sbjct: 280 TAQLSNDKTFALLEFRNAADTTVALAFDGITMEDNDDMDTTNGDSNGSNQGLSIRRPKDY 339
Query: 331 NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFG 390
A P Q N+ + P++I V +P + E + LL SFG
Sbjct: 340 ILPSAVEGEPHQEGVVSNVVP-----------DSPNKICVSNIPPFIEEEPVTMLLVSFG 388
Query: 391 PLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK 450
L+ F LVKD ETG S+G AFC Y+D TDIA LNG+++G+K L V RA+ G
Sbjct: 389 ELKSFVLVKDSETGESRGIAFCEYRDPMSTDIAVENLNGMELGNKKLKVVRASIGTT--- 445
Query: 451 PEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
Q + L +++ S+V+ L +V+ +EL D+++YEEI +D+R E
Sbjct: 446 --QAAGLDMGVNAMSMYAKTTSQDIEASRVLQLLNMVTTEELIDNDDYEEICDDVRDECS 503
Query: 511 KF 512
K+
Sbjct: 504 KY 505
>gi|258576333|ref|XP_002542348.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902614|gb|EEP77015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 621
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 151/284 (53%), Gaps = 31/284 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R A+R++V LPP+ +E ++A FF+ + G N D ++ ++ + KFA +E +
Sbjct: 220 SRQAKRLFVHNLPPSVSEDTLAQFFN--LQLNGLNVISGVDPCISAQVSSDGKFALLEFK 277
Query: 302 SVEEASNAMALDGIIFE-----------GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
+ +A+ A+ALDGI E G + ++RP DY + PS+ + +
Sbjct: 278 TASDATVALALDGISLEHDDANGTSSAPGQGLSLKRPKDY-------IVPSEADDSNRQD 330
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
V S + P++I V +P + E Q+ LL SFG L+ F LVKD T S+G A
Sbjct: 331 GVV----SNEVPDSPNKICVTNIPPFIQEEQVTMLLVSFGELKSFVLVKDSGTDESRGIA 386
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y D S T+IA LNG+++GDK L V RA+ GA Q V +A A
Sbjct: 387 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIGATQAAGLDMGV--NAMSMFAKTTSQ 444
Query: 471 -LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L+ G +V+ L +V+A+EL D +EYEEI +D+R+E K+
Sbjct: 445 DLETG----RVLQLLNMVTAEELMDSDEYEEICDDVREECSKYG 484
>gi|453082700|gb|EMF10747.1| hypothetical protein SEPMUDRAFT_48483 [Mycosphaerella populorum
SO2202]
Length = 432
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 183/367 (49%), Gaps = 65/367 (17%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA------NPAIPGMFPNMFPLVTGQQF 226
+ +R++ +D+ PP + A A + +PGA +PA F N G Q
Sbjct: 37 RKRRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGAPRQQPMDPAKLQAFMNQ----PGNQA 92
Query: 227 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN 286
+ A+ + R ++RV V LPP+A ++S+ FF+ + G N D ++
Sbjct: 93 SS------SALKPSSARQSKRVMVHNLPPSATDESMVDFFN--LQLNGLNITRGVDPCIS 144
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFE-----------GAP--VKVRRPSDYNPS 333
+ +K +A VE ++ E+A+NAMALDGI + GAP ++++RP DY
Sbjct: 145 AQCSKDKTYALVEFKTPEDATNAMALDGITMDHDAMDTSGASNGAPKGLQIKRPRDY--- 201
Query: 334 LAATLGPSQPNPNLNLAAVGLTPGSAGGLEG--PD---RIFVGGLPYYFTEAQIRELLES 388
PN + T +G L PD +I + LP + E QI+ELL S
Sbjct: 202 -------IVPN------VIDETENESGLLSNTVPDTQNKISITNLPSFLAEEQIQELLMS 248
Query: 389 FGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ 448
FG L+ F LV+++ +G S+G AFC Y+D SVT +A +LNG+++ D + V+ A+ G Q
Sbjct: 249 FGELKSFVLVRNQSSGESRGIAFCEYKDPSVTKVAVDSLNGMELADTAMRVKLASIGIQQ 308
Query: 449 PKPEQESVLLHAQQQIALQRLMLQPGSVPS---KVVCLTQVVSADELKDDEEYEEILEDM 505
+ ++ + LM S + +V+ L +++ +EL D ++ +EILED+
Sbjct: 309 ---------VSSEMSVNAMSLMAGAKSTDADNGRVLALMNMITPEELMDPDDADEILEDV 359
Query: 506 RQEGGKF 512
++E K+
Sbjct: 360 KEECAKY 366
>gi|156061663|ref|XP_001596754.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980]
gi|154700378|gb|EDO00117.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 518
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 175/356 (49%), Gaps = 42/356 (11%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q F A P
Sbjct: 125 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSKL-----QAFMAQPSG 178
Query: 233 PVQ--AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
V A+ +R ++R+ V +P E+++ FF+ + G N D ++ ++
Sbjct: 179 SVTNAALKPSNSRQSKRLLVHNIPADTKEETLVGFFN--LQLNGLNVIEGSDPCISAQVS 236
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEG-------------APVKVRRPSDYNPSLAAT 337
+ FA +E ++ +A+ A+ALDGI E + +RRP DY
Sbjct: 237 KDGSFALLEFKTQSDATVALALDGITMENNDHMVTGNGSADTQGLSIRRPKDYIVPAVTD 296
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
P +P N+ + ++I V +P+Y + Q+ ELL SFG L+ F L
Sbjct: 297 ETPFEPGVVSNIVP-----------DTQNKISVANIPHYLNDEQVTELLVSFGELKAFVL 345
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD T S+G AFC Y D + TDIA LNG+++GDK L V+RA+ G Q + SV
Sbjct: 346 VKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQRASIGNTQVSGLEMSV- 404
Query: 458 LHAQQQIA-LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+A +A L+ G +V+ L +V+ +EL D+E+YEEI ED+++E K+
Sbjct: 405 -NAMSMLAGTTSQDLENG----RVLQLLNMVTPEELIDNEDYEEICEDVKEECEKY 455
>gi|406699650|gb|EKD02849.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Trichosporon asahii var. asahii CBS 8904]
Length = 487
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 144/289 (49%), Gaps = 34/289 (11%)
Query: 228 ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV 287
LP V +TQ+ +R+Y G+ NE + F++V+ +G + G+AV V
Sbjct: 124 GLPSSFVSPLTQK-----KRIYFAGVTDAMNENRLRKLFNKVLRDVGYD----GEAVSGV 174
Query: 288 YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL 347
IN EK + +VE S + A + F+GAP++ +RP D+ +P L
Sbjct: 175 EINKEKDYVWVEFVSSDLAQVVFNKKDLDFDGAPIEPKRPKDF----------VGIDPAL 224
Query: 348 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
V P +++FVGGLP +++ELL FG LR F+LVK+ SK
Sbjct: 225 GFMGVSGDPN--------NKLFVGGLPTTLGSDEVKELLTPFGELRTFNLVKEGNGSVSK 276
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
G+AF + D +VTDIA LNG ++GD+ L V+RA S + Q Q
Sbjct: 277 GFAFVEFLDPAVTDIAIQGLNGFQLGDRALVVQRAATTGRS----ASSTGVSGTAQFLAQ 332
Query: 468 RLMLQPGSVP---SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+L+ P ++V+ + +V ADEL DD++Y +ILED+R E KF
Sbjct: 333 SSILEKADEPAPATRVILMLNMVGADELYDDQDYADILEDIRDECSKFG 381
>gi|259480265|tpe|CBF71237.1| TPA: splicing factor u2af large subunit (AFU_orthologue;
AFUA_7G05310) [Aspergillus nidulans FGSC A4]
Length = 547
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 173/366 (47%), Gaps = 59/366 (16%)
Query: 173 SKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
++ +R++ +D+ PP + A +A + GMFP P QQ P+
Sbjct: 149 TRKRRLTQWDIKPPGYENVTAEQAKLSADDL--------GMFP--LPGAPRQQ----PMD 194
Query: 233 P--VQAMTQQA--------------TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN 276
P +QA Q+ +R A+R++V LPP A +++ +FF+ + G N
Sbjct: 195 PSRLQAFMNQSGGGSADTSALKPSNSRQAKRLFVYNLPPNATVENLVSFFN--LQLNGLN 252
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF--------EGAP--VKVRR 326
D ++ I+ + FA +E +S + + A+ALDGI GA ++VRR
Sbjct: 253 VIQSVDPCISAQISDDHSFALLEFKSPNDTTVALALDGITMGEHESNGENGAAKGLEVRR 312
Query: 327 PSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELL 386
P DY PNL + G + P++I V +P Y E + LL
Sbjct: 313 PKDYI------------VPNLAEQDLEGASGMKDVPDSPNKICVSNIPQYIPEEPVTMLL 360
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
+SFG L+ F LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G
Sbjct: 361 KSFGELKSFVLVKDSSTEESRGIAFCEYADPNTTTIAVQGLNGMELGDRHLKVVRASIGM 420
Query: 447 NQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMR 506
Q + L +++ S+V+ L +V+ +EL D+E+YEEI +D+R
Sbjct: 421 T-----QAAGLDMGVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELMDNEDYEEICDDVR 475
Query: 507 QEGGKF 512
E KF
Sbjct: 476 DECSKF 481
>gi|67541022|ref|XP_664285.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
gi|40738434|gb|EAA57624.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
Length = 624
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 173/366 (47%), Gaps = 59/366 (16%)
Query: 173 SKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
++ +R++ +D+ PP + A +A + GMFP P QQ P+
Sbjct: 149 TRKRRLTQWDIKPPGYENVTAEQAKLSADDL--------GMFP--LPGAPRQQ----PMD 194
Query: 233 P--VQAMTQQA--------------TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN 276
P +QA Q+ +R A+R++V LPP A +++ +FF+ + G N
Sbjct: 195 PSRLQAFMNQSGGGSADTSALKPSNSRQAKRLFVYNLPPNATVENLVSFFN--LQLNGLN 252
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF--------EGAP--VKVRR 326
D ++ I+ + FA +E +S + + A+ALDGI GA ++VRR
Sbjct: 253 VIQSVDPCISAQISDDHSFALLEFKSPNDTTVALALDGITMGEHESNGENGAAKGLEVRR 312
Query: 327 PSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELL 386
P DY PNL + G + P++I V +P Y E + LL
Sbjct: 313 PKDYI------------VPNLAEQDLEGASGMKDVPDSPNKICVSNIPQYIPEEPVTMLL 360
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
+SFG L+ F LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G
Sbjct: 361 KSFGELKSFVLVKDSSTEESRGIAFCEYADPNTTTIAVQGLNGMELGDRHLKVVRASIGM 420
Query: 447 NQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMR 506
Q + L +++ S+V+ L +V+ +EL D+E+YEEI +D+R
Sbjct: 421 T-----QAAGLDMGVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELMDNEDYEEICDDVR 475
Query: 507 QEGGKF 512
E KF
Sbjct: 476 DECSKF 481
>gi|398403643|ref|XP_003853288.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
gi|339473170|gb|EGP88264.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
Length = 544
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 177/362 (48%), Gaps = 52/362 (14%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALP-- 230
K +R++ +D+ PP + A A + +PGA P +P M N ++F A P
Sbjct: 148 KPRRMTQWDVKPPGYENVTAEQAKLSGMFPLPGA-PRVPAMDANRL-----KEFMAQPGS 201
Query: 231 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
A+ + R ++R+ V LP +A + S+ FF+ + G N D ++ I+
Sbjct: 202 QANTSALKPSSARQSKRLLVYNLPASATDDSLMDFFN--LQLNGLNVTKGADPCISANIS 259
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIFEG-------------APVKVRRPSDYNPSLAAT 337
+A +E ++ E+A+NAMA+DGI E ++++RP DY
Sbjct: 260 QGNGYALLEFKTPEDATNAMAMDGIKMEADVDMGNGESNGTSKGLEIKRPKDY------- 312
Query: 338 LGPSQPNPNLNLAAV--GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGF 395
+ P+ + N + + + P + ++I + +P Y E Q+ ELL SFG L+ F
Sbjct: 313 IVPTVSDETENTSGLFSSIVPDTQ------NKISITNIPVYLQEEQVVELLTSFGQLKNF 366
Query: 396 DLVKDRETGNSKGYAFCVYQDL-SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 454
LVKD+ T S+G AF Y+D S T IA ALNG+ +GD L V+ A+ G Q
Sbjct: 367 VLVKDKSTEESRGIAFVEYKDPDSTTKIALEALNGMDLGDAALKVKLASIGIQQ------ 420
Query: 455 SVLLHAQQQIALQRLMLQPGSVPS---KVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
+ + + L+ S + +V+CL +++ +EL D +E +EILED+++E K
Sbjct: 421 ---VSGEMTVGAMGLIAGTKSTDADNGRVLCLMNMITPEELMDADEADEILEDVKEECAK 477
Query: 512 FA 513
+
Sbjct: 478 YG 479
>gi|367042858|ref|XP_003651809.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
gi|346999071|gb|AEO65473.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
Length = 563
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 177/353 (50%), Gaps = 35/353 (9%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P Q G++
Sbjct: 166 RKRRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGA-PRQQAMDPTKLQAFMNQPGGSVNS- 223
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
A+ +R ++R+ V LP +A E+S+ F + + G N D + I +
Sbjct: 224 --AALRPTNSRQSKRLVVENLPASATEESMVNFIN--LQLNGLNVIENTDPCLQCLIAPD 279
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEG-------------APVKVRRPSDYNPSLAATLG 339
+ FA +E R+ +A+ A+A DGI E A +++RRP DY + A +
Sbjct: 280 RSFAMLEFRNSPDATVALAFDGISMEADDAHAANGNGAAPAGLRIRRPKDY--IVPAVVE 337
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
+P+ ++ S+ ++ P++I V LP Y T+ Q+ ELL SFG L+ F LVK
Sbjct: 338 DPNYDPDSDVP-------SSVVIDSPNKISVTNLPLYLTDDQVMELLVSFGKLKSFVLVK 390
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D T S+G AF Y D SVT++A LN + +G++ L V++A+ G Q E ++
Sbjct: 391 DNGTQESRGIAFLEYVDPSVTNVAIQGLNNMMLGERALKVQKASIGITQVAGEMG---VN 447
Query: 460 AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
A +A S S+V+ L +V+ADEL D+++YEEI +D++ E KF
Sbjct: 448 AMSMLAGTT---STDSDVSRVLQLLNMVTADELMDNDDYEEIRDDVQDECEKF 497
>gi|261196608|ref|XP_002624707.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595952|gb|EEQ78533.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609528|gb|EEQ86515.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ER-3]
gi|327350238|gb|EGE79095.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 570
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 143/287 (49%), Gaps = 33/287 (11%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R A+R++V LPP+A E+ + FF+ + G N D ++ ++ +K FA +E R
Sbjct: 237 SRQAKRLFVHNLPPSATEERLVQFFN--LQLNGLNVIKGVDPCLSAQLSRDKTFALLEFR 294
Query: 302 SVEEASNAMALDGIIFEGAP---------------VKVRRPSDYNPSLAATLGPSQPNPN 346
+ + + A+A DGI E + + +RRP DY A P Q
Sbjct: 295 NAADTTVALAFDGITMEDSGEMDTSNGDVDGPSQGLSIRRPKDYILPSAVEEEPQQEGVV 354
Query: 347 LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 406
N+ + P++I V +P + E + LL SFG L+ F LVKD ETG S
Sbjct: 355 SNVVP-----------DSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFILVKDSETGES 403
Query: 407 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIAL 466
+G AFC Y D + T+IA LNG+++G+K L V RA+ G Q + L +++
Sbjct: 404 RGIAFCEYLDPTSTEIAVENLNGMELGNKRLKVVRASVGTT-----QAAGLDMGVNAMSM 458
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+V+ L +V+ +EL D+++YEEI +D+R E K+
Sbjct: 459 YAKTTSQDIEASRVLQLLNMVTTEELMDNDDYEEICDDVRDECSKYG 505
>gi|361132025|gb|EHL03640.1| putative Splicing factor U2AF 50 kDa subunit [Glarea lozoyensis
74030]
Length = 568
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 166/329 (50%), Gaps = 46/329 (13%)
Query: 210 IPGMFPNMFPLVTGQQ------FGALPVMPVQAMTQQA-----TRHARRVYVGGLPPTA- 257
+ GMFP P QQ A+ P ++T A +R A+R+ V LP T+
Sbjct: 194 LSGMFP--LPGAPRQQPMDPSKLQAIMAQPSGSVTNAALKPSNSRQAKRLLVHNLPSTSI 251
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
+E+++ FF+ M G N D ++ I+ +K FA +E ++ +A+ A+A DGI
Sbjct: 252 SEEAIINFFNLQMN--GLNIVEGSDPCISAQISKDKSFALLEFKTPSDATLALAFDGITM 309
Query: 318 EGAP-------------VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
+ + + +RRP DY + P +P G+ S+ ++
Sbjct: 310 DDSEYVNREANGGDTKGLSIRRPKDYIVPAVSDETPQEP---------GVV--SSVVVDT 358
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD-LSVTDIA 423
++I + +P Y T+ Q+ ELL SFG L+ F LVKD TG S+G AFC Y D + TDIA
Sbjct: 359 QNKICMSNVPLYLTDEQVIELLTSFGELKAFVLVKDNSTGESRGIAFCEYADPAAATDIA 418
Query: 424 CAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCL 483
LNG+++GDK L V+RA+ G Q S L +++ G +V+ L
Sbjct: 419 VEGLNGMELGDKHLRVQRASIGNTQV-----SGLEMGVNAMSMLAGTTSAGLEDGRVLQL 473
Query: 484 TQVVSADELKDDEEYEEILEDMRQEGGKF 512
+V+ +EL D+++YEEI ED+++E K+
Sbjct: 474 LNMVTPEELVDNDDYEEICEDVKEECEKY 502
>gi|296083697|emb|CBI23686.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 210/471 (44%), Gaps = 79/471 (16%)
Query: 89 DREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRK--------- 139
DR R R+ ++E R HR E++RER+ +K D + S DR++
Sbjct: 217 DRYADRSRKSEKESKRKHRTGEDEKNRERNSMKK-HDPGKRHESEFLDRKERRESPPSRR 275
Query: 140 ---DYDRDR-----EDRHKRRSQSRSRGRSEHRSRSR----------SRSRSKSKRISGF 181
D DR+R H RR + G + R R +RS K+ +G+
Sbjct: 276 QHSDADRNRISNNGSSSHFRRHGGSASGLGGYSPRKRRTEAAIKTPSPTNRSPEKKSAGW 335
Query: 182 DMAPPASAMLAAGAGAAAAGQIPGANP-AIPGMFPNM---FPLVTGQQFGALPVMPVQAM 237
D+ P S AG+ + ++P A P A+P P + + + ++
Sbjct: 336 DLPP--SRTDGMNAGSVLSNELPSAVPVAVPVTATTAKPPLPRIYSDAVSKNKNVSIDSI 393
Query: 238 -TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
QATR RR+YV LP +++E+++ + + + G N ++ I+ EK A
Sbjct: 394 QLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHKEKGQA 453
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
VE + E+AS A++ DGI F G+ +K+RRP D+ G + L A P
Sbjct: 454 LVEFLTPEDASAALSFDGISFSGSILKIRRPKDF----VDMTGVQE-----KLVA---AP 501
Query: 357 GSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
+ + + P +IF+GG+ + + E+ +FGPL+ + + + G + AF Y
Sbjct: 502 DAISDIVKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDLG--EPCAFLEY 559
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQGA-------NQP---KPEQESVLLHAQQQI 464
D SVT ACA LNG+K+G + LTV +A A N P PE LL
Sbjct: 560 VDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAKPLLER---- 615
Query: 465 ALQRLMLQPGSVPSKVVCLTQVVSADELK--DDEEYEEILEDMRQEGGKFA 513
P++V+ L VV+ D+L + E EEILED+R E +F
Sbjct: 616 ------------PTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFG 654
>gi|255931767|ref|XP_002557440.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582059|emb|CAP80223.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 554
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 168/347 (48%), Gaps = 32/347 (9%)
Query: 173 SKSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA---NPAIPGMFPNMFPLVTGQQFGA 228
++ +R++ +DM PP + A A + +PGA P P + TG A
Sbjct: 173 TRKRRLTQWDMKPPGYENVTAEQAKISGMFPLPGAPRQQPMDPSRMKDFLNPPTGDSENA 232
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVY 288
A+ +R ++R++V +PP + +V FF+ + G N D ++
Sbjct: 233 -------ALKPSNSRQSKRLFVYNIPPGVSGDAVIAFFN--LQLNGLNVIRSVDPCISAQ 283
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAP---VKVRRPSDYNPSLAATLGPSQPNP 345
++ +K FA +E + +A+ A+ALDGI + ++VRRP DY + P QP
Sbjct: 284 VSEDKTFALLEFKDPNDATVALALDGITMPESGDKGLEVRRPKDYIVPDGSAAQPVQPGV 343
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
LN + P++I + +P Y E I LL+SFG L+ F LVKD T
Sbjct: 344 VLNEVP-----------DSPNKICISNIPTYINEEAIIMLLKSFGDLKSFILVKDAATEE 392
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
S+G AF Y D + T +A LNG+++ D+ L RA+ G Q V +A Q A
Sbjct: 393 SRGIAFYEYVDPNNTALAVEGLNGMELADRRLKFVRASIGTTQATGLDMGV--NAMQMFA 450
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q ++V+ L +V+ DEL +DE+YEEILED+ +E KF
Sbjct: 451 --KTTSQDLET-TQVLQLLNMVTLDELLNDEDYEEILEDVGEECSKF 494
>gi|221059061|ref|XP_002260176.1| U2 snRNP auxiliary factor [Plasmodium knowlesi strain H]
gi|193810249|emb|CAQ41443.1| U2 snRNP auxiliary factor, putative [Plasmodium knowlesi strain H]
Length = 865
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 37/310 (11%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA---GPGDAVVNVYI-----NH 291
+ + R++Y+G +PP + ++ + FF+ + +I +++ GD V+ + N
Sbjct: 489 EGDKKQRKLYIGNIPPNSKQEELIDFFNNTLGSIIKDSSLEIKIGDIVLMPILKCEIFNV 548
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY------NPSLAATLGPSQPNP 345
E +F F+E RS+E + LD I F +++ RP D+ +P+L Q
Sbjct: 549 ESRFCFLEFRSLEITWLCLRLDAITFNNYALRIARPHDFVPPPGGDPALTVVFTDIQHEV 608
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
+ + + P + G + +++++ LP+ + QIR+LL+ FG L+GF+++KD+ TG
Sbjct: 609 FEMVKPIKIAPVRSTG-DDDNKLYIQNLPHDLGDVQIRDLLQQFGKLKGFNVIKDQSTGL 667
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
+KGY F Y+D + T IA ALNG G L+V++A G +Q + + + +
Sbjct: 668 NKGYGFFEYEDSNCTPIAMHALNGFVCGQNILSVKKATFGKSQNSTQNANTISLGSGSVD 727
Query: 466 LQRLML----------------------QPGSVPSKVVCLTQVVSADELKDDEEYEEILE 503
L +L + G S+VV LT V ++L D +YEEIL
Sbjct: 728 LPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDLIIDSQYEEILR 787
Query: 504 DMRQEGGKFA 513
D+++E K+
Sbjct: 788 DIKEEAEKYG 797
>gi|295663747|ref|XP_002792426.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279096|gb|EEH34662.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 567
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 170/359 (47%), Gaps = 43/359 (11%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P + P+ Q F PV
Sbjct: 168 RKRRLTQWDIKPPGYEHVTAEQAKLSGMFPLPGA-PRQQAVDPSRL-----QAFMNQPVP 221
Query: 233 PVQAMT---QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
+ T +R A+R++V +PP+A E+S+ FF+ + G N D V+ +
Sbjct: 222 GISTNTVLRPSNSRQAKRLFVHNIPPSATEESLVQFFN--LQLNGLNVIKGVDPCVSAQL 279
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAP---------------VKVRRPSDYNPSL 334
+ ++ F +E +S +A+ A+A DGI E + +RRP DY +
Sbjct: 280 SKDRSFGLLEFKSSADATVALAFDGITMEDTGDMDTSNGEANGSNQGLSLRRPKDYILPV 339
Query: 335 AATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG 394
+ P+ + P + P++I V +P + E + LL SFG L+
Sbjct: 340 GG-----EEEPHREGVVSNVVPDT------PNKICVSNIPPFIEEEPVTMLLVSFGELKS 388
Query: 395 FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE 454
F LVKD ETG S+G AFC Y D TDIA LNG+++G+K L V RA+ G Q
Sbjct: 389 FVLVKDSETGESRGIAFCEYLDPMSTDIAVENLNGMELGNKRLKVVRASIGTI-----QA 443
Query: 455 SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ L +++ +V+ L +V+ DEL D+++YEEI +D+R E K+
Sbjct: 444 TGLDMGINAMSMYAKTTSQDIEAGRVLQLLNMVTTDELLDNDDYEEICDDVRDECSKYG 502
>gi|384500209|gb|EIE90700.1| hypothetical protein RO3G_15411 [Rhizopus delemar RA 99-880]
Length = 490
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 163/357 (45%), Gaps = 99/357 (27%)
Query: 174 KSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLV---TGQQFGALP 230
+ +++ +DMAP AG A Q+ + G+FP +V T Q F P
Sbjct: 150 RPRKLHNWDMAP-------AGMEGMTAQQV-----KMTGLFPLPGQVVGTRTPQSFQPPP 197
Query: 231 VMP------VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 284
V + A AT+ ARR+YVG +PP E+ +A FF+ M + P V
Sbjct: 198 VNNKFDDSRILAANTTATKQARRLYVGQIPPGLEEKPLADFFNATMHQLQMQDRTP---V 254
Query: 285 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 344
V INHEK +AFVE ++ E+A+ MA DGI+F+G +K+RRP DY P P++ +
Sbjct: 255 AAVQINHEKSYAFVEFQTAEQATACMAFDGIMFQGQQLKIRRPKDYQP-------PAEGD 307
Query: 345 PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETG 404
++ L GL S + P++IF+GGLP Y + Q+ ELL+SF
Sbjct: 308 VSMQLP--GLV--STNVPDTPNKIFIGGLPVYLNDDQVIELLKSF--------------- 348
Query: 405 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQI 464
GD+ L V+RA+ GA P+ S
Sbjct: 349 ----------------------------GDRKLIVQRASVGAKHIPPDYMS--------- 371
Query: 465 ALQRLMLQPGSVP---------SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
ML VP ++V+ L +V+ +EL+DDEEY++I ED+ +E KF
Sbjct: 372 ---GPMLPANYVPVTSAKEDDATRVLQLMNMVTPEELEDDEEYQDIWEDIAEECAKF 425
>gi|68068227|ref|XP_676023.1| U2 snRNP auxiliary factor [Plasmodium berghei strain ANKA]
gi|56495523|emb|CAI00540.1| U2 snRNP auxiliary factor, putative [Plasmodium berghei]
Length = 630
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 235/533 (44%), Gaps = 97/533 (18%)
Query: 65 DRDRDRDRDRTREKDRDREKSRDMDREKSRDRE---------------------KDREKD 103
D+D+ ++D +R +++D+E+SRD D+++ R +E +D+ +
Sbjct: 43 DKDKGSNKDISRGRNKDKERSRDNDKDRRRHKELPSSDDEIHSSKRKRRSKERRRDKSVE 102
Query: 104 RHHRDRHRERSRERSERRKDRDDDDHYRSRDY-DRRKDYDRDREDRHKRRSQSRSRGRSE 162
R R++ +ERSR RS ++ +DD SR+ + R D D +R HK + + + +
Sbjct: 103 RRRRNKSKERSRGRSRYKRSKDD-----SRNISNSRSDSDHERNHYHKSKKSKKYKSSWD 157
Query: 163 HRSRSRS----RSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMF 218
+ ++ S + R K+ R D++ P + + + N
Sbjct: 158 NSDKNYSDDSTKERKKNTRDKN-DISMPEEDTKKENKEIKPKKKKSKWDTVDESLLKNNI 216
Query: 219 PLVTGQQFGALPV-----------------MPVQAMTQQATRHARRVYVGGLPPTANEQS 261
+ + G L + + + + R++Y+G LPP + ++
Sbjct: 217 LIDSNNLSGVLQYQRLGLNGNLLQGNKGSQLSRNSYELEGDKKQRKLYIGNLPPNSKQEE 276
Query: 262 VATFFSQVMAAIGGNTA---GPGDA----VVNVYI-NHEKKFAFVEMRSVEEASNAMALD 313
+ FF+ +++I ++ GD VV I N + +F F+E R+++ + LD
Sbjct: 277 IVEFFNNTISSIIKGSSLEVKIGDVQLLPVVKCEIFNADSRFCFLEFRTMDITWLCLKLD 336
Query: 314 GIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGP-------- 365
+ + +++ RP DY P P + +P L + + G + P
Sbjct: 337 SMSYNNYCLRINRPHDYMP-------PPEGDPALTVVFPDIDMGLLESFKPPKIAPVRST 389
Query: 366 ----DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+++++ LP+ + QI +LL FG L+GF+++KD TG +KGY F Y+D S T
Sbjct: 390 GDDDNKLYIQNLPHDLKDDQIMDLLGQFGKLKGFNIIKDLNTGLNKGYGFFEYEDSSCTQ 449
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQ--------------QQI--- 464
+A ALNG G L V++A N + ++ A Q+I
Sbjct: 450 VAIHALNGFVCGKNILNVKKATFNKNSNNAPNSNNIVLANNVDVPVSLLPNSISQKILSN 509
Query: 465 ALQRLMLQP----GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
++ L +Q G S+V+ LT V ++L D +Y+EIL+D+++E K+
Sbjct: 510 SIIGLQIQASRKIGEKSSRVIQLTNAVFQEDLIIDSQYDEILKDVKEEAEKYG 562
>gi|116192501|ref|XP_001222063.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
gi|88181881|gb|EAQ89349.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
Length = 566
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 45/356 (12%)
Query: 176 KRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPV 234
+R++ +D+ PP + A A + +PGA P M P Q GA+
Sbjct: 171 RRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGA-PRQQAMDPTKLQAFMNQPGGAVNS--- 226
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
A+ +R ++R+ + LP + ++S+ FF+ + G N D + +I E+
Sbjct: 227 AALKPSNSRQSKRLIISNLPASVTDESLTNFFN--LQLNGLNVIETADPCLQAHIAAERA 284
Query: 295 FAFVEMRSVEEASNAMALDGIIFEG-----------AP--VKVRRPSDYNPSLAATLGPS 341
FA VE R+ +A+ A+ALDGI E AP + +RRP DY + A +
Sbjct: 285 FAMVEFRNNTDATVALALDGISMEADDAHAANGNGTAPQGLHIRRPKDY--IVPAVVEDP 342
Query: 342 QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDR 401
+P+ + S+ ++ P++I V LP Y TE Q+ ELL SFG L+ F LVKD
Sbjct: 343 NYDPDSDRP-------SSVVVDSPNKISVTNLPLYLTEDQVMELLVSFGKLKSFVLVKDN 395
Query: 402 ETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQ 461
T S+G AF Y D VT +A L+ + +G++ L V++A+ G Q
Sbjct: 396 GTEESRGIAFLEYADPGVTTVAIQGLHNMMLGERALKVQKASIGITQ-----------VS 444
Query: 462 QQIALQRLMLQPGSVPS-----KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++ + + + G+ + +V+ L +V+ DEL D+++YEEI +D+++E KF
Sbjct: 445 GEMGVNAMSMLAGTTSADAGAGRVLQLLNMVTPDELMDNDDYEEIRDDVQEECEKF 500
>gi|124810295|ref|XP_001348830.1| U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
gi|23497731|gb|AAN37269.1|AE014827_12 U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
Length = 833
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 237/549 (43%), Gaps = 87/549 (15%)
Query: 31 RSADDHSDSKPQHGSRDYERESSRSREKE-KEKGRDRDRDRDRDRTREKDRDREKSRDMD 89
++ + HS+S + ++ R SR R E ++K +D+ RDR ++++R++ RDR K R
Sbjct: 238 KTIEVHSNS--EENKQEKRRTKSRERSIEYRKKSKDKWRDRSKEKSRQRSRDRSKERSRQ 295
Query: 90 REKSR-----------DREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRR 138
R + R DR + R KD R++ SR S D++HY +
Sbjct: 296 RSRDRWRDRSRDRWGLDRRRSRYKDSRDRNKFSYHSRSISS------DEEHYSKNKKRTK 349
Query: 139 K-----DYDRDREDRHKRRSQSRSRGRSEHRSRSR---SRSRSKSKRISGFDMAPPASAM 190
+ + D+D + R +S + +R + S K ++ S +D
Sbjct: 350 RRKSRHNIDKDSYSSSSNSTHRRRNRKSSSSNNTRKDDNNSIQKKRKKSKWDTVDECLLN 409
Query: 191 LAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQ---QFGALPVMPVQAMTQQATRHARR 247
+ + G+F VTG Q + + Q + R+
Sbjct: 410 NNLLNNS------------VSGIFQKSSLTVTGNLIAQNNKITDLSRNPYEQDTDKKQRK 457
Query: 248 VYVGGLPPTANEQSVATFFSQVMAAIGGNTA---GPGDA----VVNVYI-NHEKKFAFVE 299
+Y+G +PP + ++ V FF+ + A+ +++ GD V+ I N + +F F+E
Sbjct: 458 LYIGNIPPNSKQEDVVDFFNNSILAVIKDSSLDVKIGDVQLMPVIKCEIFNSDSRFCFLE 517
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV-GLTPGS 358
R+V+ + LD I + +++ RP DY P + ++N+ L P
Sbjct: 518 FRTVQITWLCLKLDSIPYNNYCLRIGRPHDYIPPPEGDPAFTTVFTDINMDVFEKLRPSK 577
Query: 359 AGGLEGP----DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
++ +R+++ LP+ + QI++LLE FG L+ F+++KD TG +KGY F Y
Sbjct: 578 PVNVKTSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIKDLNTGLNKGYGFFEY 637
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK------------------------ 450
+D S T +A ALNG G L V++A QP
Sbjct: 638 EDSSCTQLAIHALNGFVCGQNILNVKKATFNK-QPTTITTNNNMNNQNPNFIALPNNSDV 696
Query: 451 -----PEQESVLLHAQQQIALQ-RLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILED 504
P S + + I LQ + + G SKVV LT V ++L D +YEEIL++
Sbjct: 697 PVTLLPSSISQKILSNSIIGLQVQASRKIGEKSSKVVQLTNAVFQEDLIVDSQYEEILKE 756
Query: 505 MRQEGGKFA 513
+++E K+
Sbjct: 757 VKEEAEKYG 765
>gi|225677913|gb|EEH16197.1| splicing factor U2AF 65 kDa subunit ) [Paracoccidioides
brasiliensis Pb03]
gi|226287345|gb|EEH42858.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 567
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 37/356 (10%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P + P+ Q +
Sbjct: 168 RKRRLTQWDIKPPGYEHVTAEQAKLSGMFPLPGA-PRQQAVDPSRLQAFMNQPVPGTSIN 226
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
V + +R A+R++V +PP+A E+S+ FF+ + G N D V+ ++ +
Sbjct: 227 TV--LRPSNSRQAKRLFVHNIPPSATEESLVQFFN--LQLNGLNVIKGVDPCVSAQLSKD 282
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAP---------------VKVRRPSDYNPSLAAT 337
+ F +E +S +A+ A+A DGI E + +RRP DY +
Sbjct: 283 RSFGLLEFKSSADATVALAFDGITMEDTGDMDTSNGEANGSNQGLSLRRPKDYILPVGG- 341
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
+ P+ + P + P++I V +P + E + LL SFG L+ F L
Sbjct: 342 ----EEEPHREGVVSNVVPDT------PNKICVSNIPPFIEEEPVTMLLVSFGELKSFVL 391
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
VKD ETG S+G AFC Y D TDIA LNG+++G+K L V RA+ G Q + L
Sbjct: 392 VKDSETGESRGIAFCEYLDPMSTDIAVENLNGMELGNKRLRVVRASIGTI-----QATGL 446
Query: 458 LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+++ +V+ L +V+ DEL D+++YEEI +D+R E K+
Sbjct: 447 DMGINAMSMYAKTTSQDIEAGRVLQLLNMVTTDELLDNDDYEEICDDVRDECSKYG 502
>gi|159123253|gb|EDP48373.1| splicing factor u2af large subunit [Aspergillus fumigatus A1163]
Length = 567
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 169/353 (47%), Gaps = 34/353 (9%)
Query: 173 SKSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPV 231
++ +R++ +D+ PP + A A + +PGA P M P+ Q G
Sbjct: 170 TRKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRLQAFMNQSGGG--S 226
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
A+ +R ARR++V LPP + + + + F+ + G N D ++ I+
Sbjct: 227 ADNSALKPSNSRQARRLFVYNLPPGVSSEHLVSLFN--LQLNGLNVIHHVDPCISAQISE 284
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFE----------GAP--VKVRRPSDYNPSLAATLG 339
+ FA +E ++ +A+ A+A DGI E GAP ++VRRP DY +
Sbjct: 285 DHSFALLEFKTPNDATVALAFDGITMEEHEPVSGAENGAPKGLEVRRPKDYIVPNGSADQ 344
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
Q LN + P++I V +P Y E + LL+SFG L+ F LVK
Sbjct: 345 EYQEGVLLNEVP-----------DSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVK 393
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D T S+G AFC Y D S T IA LNG+++GD+ L V RA+ G Q + L
Sbjct: 394 DSSTEESRGIAFCEYADPSATAIAVEGLNGMELGDRHLKVVRASIGMT-----QAAGLDM 448
Query: 460 AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+++ S+V+ L +V+ +EL D+++YEEI +D+R+E K+
Sbjct: 449 GVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELLDNDDYEEICDDVREECFKY 501
>gi|146324846|ref|XP_748978.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
gi|129556630|gb|EAL86940.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
Length = 563
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 169/353 (47%), Gaps = 34/353 (9%)
Query: 173 SKSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPV 231
++ +R++ +D+ PP + A A + +PGA P M P+ Q G
Sbjct: 166 TRKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRLQAFMNQSGGG--S 222
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
A+ +R ARR++V LPP + + + + F+ + G N D ++ I+
Sbjct: 223 ADNSALKPSNSRQARRLFVYNLPPGVSSEHLVSLFN--LQLNGLNVIHHVDPCISAQISE 280
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFE----------GAP--VKVRRPSDYNPSLAATLG 339
+ FA +E ++ +A+ A+A DGI E GAP ++VRRP DY +
Sbjct: 281 DHSFALLEFKTPNDATVALAFDGITMEEHEPVSGAENGAPKGLEVRRPKDYIVPNGSADQ 340
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
Q LN + P++I V +P Y E + LL+SFG L+ F LVK
Sbjct: 341 EYQEGVLLNEVP-----------DSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVK 389
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D T S+G AFC Y D S T IA LNG+++GD+ L V RA+ G Q + L
Sbjct: 390 DSSTEESRGIAFCEYADPSATAIAVEGLNGMELGDRHLKVVRASIGMT-----QAAGLDM 444
Query: 460 AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+++ S+V+ L +V+ +EL D+++YEEI +D+R+E K+
Sbjct: 445 GVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELLDNDDYEEICDDVREECFKY 497
>gi|389642205|ref|XP_003718735.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
gi|351641288|gb|EHA49151.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
Length = 620
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 25/282 (8%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R ++R+ + LP E S+ +F + + + N D + + + FA VE R
Sbjct: 289 SRQSKRLILSNLPAGTTEDSLISFLNLQLNGL--NVIEASDPCLACQMAPDGSFAMVEFR 346
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV---GLTPG- 357
S + + A ALDGI E D N + + L +P + A V G PG
Sbjct: 347 SPSDTTVAYALDGISMEAEDAG---NGDANGAASKGLAMRRPKDYIVPAVVDDTGYEPGV 403
Query: 358 -SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
S+ ++ P +I V LP Y T+ Q+ ELL SFG L+ L KD T S+G AFC Y D
Sbjct: 404 VSSRVVDTPHKISVTNLPAYLTDEQVVELLSSFGELKALVLAKDSSTEESRGIAFCEYVD 463
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
++ TD+A LNG+++GDK L VR+A+ G Q + ++ + + + G+V
Sbjct: 464 VTNTDVAIEGLNGMELGDKRLKVRKASIGITQ----------VSGMEMGVNAMSMLAGTV 513
Query: 477 P-----SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S V+ L +V+ADEL D+++YEEI ED+++E K+
Sbjct: 514 AQDPDLSPVLQLLNMVTADELMDNDDYEEICEDVQEECAKYG 555
>gi|449299113|gb|EMC95127.1| hypothetical protein BAUCODRAFT_526859 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 155/299 (51%), Gaps = 48/299 (16%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A+ R ++R++ +PP NE ++ FF+ + G N D ++ ++ + +
Sbjct: 94 ALKPSTARQSKRLFAYNIPPNVNESMISDFFN--LQLNGLNVTRGVDPCISAQLSQDLTY 151
Query: 296 AFVEMRSVEEASNAMALDGI-------IFEGAP------VKVRRPSDYNPSLAATLGPSQ 342
A ++ ++ E+A+NAMALDGI + G+ + ++RP DY
Sbjct: 152 ALLDFKTSEDATNAMALDGITMPEHMEVMNGSANGNSQGLIIQRPKDY------------ 199
Query: 343 PNPNLNLAAVGLTPGSAGGLEG--PD---RIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
+ A V T AG L PD +I + +P Y TE Q++ELL SFG L+ F L
Sbjct: 200 ----IVPAVVDDTEHEAGVLSSTVPDTQFKISITHIPSYLTEEQVQELLVSFGELKNFVL 255
Query: 398 VKDRETGNSKGYAFCVYQDL-SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
VKD T S+G AFC Y+D + TDIA +LNG+++GD L V+RA+ G Q E +
Sbjct: 256 VKDAGTDQSRGIAFCEYKDAKNTTDIAVESLNGMELGDSHLKVQRASIGTQQVGGE---M 312
Query: 457 LLHAQQQIALQRLMLQPGSV---PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++A +A G S+V+CL +++ +EL D +E +EILED+++E K+
Sbjct: 313 TVNAMSMMASAA-----GGADRDASRVLCLMNMITPEELMDADEADEILEDVKEECAKY 366
>gi|440468063|gb|ELQ37246.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae Y34]
gi|440489023|gb|ELQ68704.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae P131]
Length = 640
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 25/282 (8%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R ++R+ + LP E S+ +F + + + N D + + + FA VE R
Sbjct: 289 SRQSKRLILSNLPAGTTEDSLISFLNLQLNGL--NVIEASDPCLACQMAPDGSFAMVEFR 346
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV---GLTPG- 357
S + + A ALDGI E D N + + L +P + A V G PG
Sbjct: 347 SPSDTTVAYALDGISMEAEDAG---NGDANGAASKGLAMRRPKDYIVPAVVDDTGYEPGV 403
Query: 358 -SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
S+ ++ P +I V LP Y T+ Q+ ELL SFG L+ L KD T S+G AFC Y D
Sbjct: 404 VSSRVVDTPHKISVTNLPAYLTDEQVVELLSSFGELKALVLAKDSSTEESRGIAFCEYVD 463
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
++ TD+A LNG+++GDK L VR+A+ G Q + ++ + + + G+V
Sbjct: 464 VTNTDVAIEGLNGMELGDKRLKVRKASIGITQ----------VSGMEMGVNAMSMLAGTV 513
Query: 477 P-----SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S V+ L +V+ADEL D+++YEEI ED+++E K+
Sbjct: 514 AQDPDLSPVLQLLNMVTADELMDNDDYEEICEDVQEECAKYG 555
>gi|164657478|ref|XP_001729865.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
gi|159103759|gb|EDP42651.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
Length = 473
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 169/354 (47%), Gaps = 54/354 (15%)
Query: 177 RISGFD----MAPPASAMLAAGAGAAAAGQIP-GANPAIPGMFPNMFPLVTGQQFGALPV 231
R GF+ ++ A+ + A + ++G + G A+PG P P +
Sbjct: 87 RAPGFEAVDALSAKATGLFGAPVNSGSSGMMMYGIRGAMPGTIP---PSAMAE------- 136
Query: 232 MPVQAMTQQATRHA------RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
++A T A +A RR++V + Q + F + M ++G +
Sbjct: 137 --LEATTSAAAFNASMYLETRRLHVSPVSSVKTSQQLRIFINAKMNERLLCSSGSLEPCY 194
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 345
V ++ ++ +A++E R+ +EASNA+ LDG+ F G + + RP Y A P P
Sbjct: 195 AVDMHLDEGYAYLEFRNPDEASNALLLDGVAFLGHRLHIERPKGYVGQDAV------PAP 248
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
+V +GP+++++G +P + E Q+ ELL++FG +R FDL++D ET
Sbjct: 249 GAIETSVP---------DGPNKLYIGNVPVFLNEQQVMELLKAFGDVRHFDLIRDPETQR 299
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
S+G AFC + + +VTD+AC L+G+++G++ L VRR N N E
Sbjct: 300 SRGMAFCEFHEDAVTDLACEGLDGLEVGEQRLMVRRVNASTNTHTHEDTQ---------- 349
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAFCSPTF 519
+ P++ + + +V+ DEL DD EY++I ED+ E + + +
Sbjct: 350 ------ETSDTPTRAMLMLNMVTTDELLDDTEYQDIKEDVHSECSRHGTVTSVY 397
>gi|414591751|tpg|DAA42322.1| TPA: hypothetical protein ZEAMMB73_939656 [Zea mays]
Length = 704
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 167/294 (56%), Gaps = 26/294 (8%)
Query: 4 YEVNGEDVDNNNNNNNNNYEYGSSPQPRS------ADDHSD---SKPQHGSRDYERESSR 54
Y+ NG+ Y G+ P S DH+D S+PQH ++ ++ SS+
Sbjct: 8 YQGNGDQATAEGGYAQTEYAAGAGGSPPSDSNPSVFSDHADGRSSQPQHETQSHDSGSSK 67
Query: 55 SREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERS 114
S+E RDR+RD+ ++++R R++ R+ +R + RD++++R RDRH
Sbjct: 68 SQE----------RDRERDKGKDRERGRDRVREKERGRDRDKDRERGDRDRDRDRHHRDR 117
Query: 115 RERSE-RRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRS 173
RERSE R DD R R +D + DRDR+ + RS+S S+GR R S
Sbjct: 118 RERSEIREHRDRSDDRDRRRSHDSERRRDRDRDGHRRHRSRSPSKGRDRDRRSSSHSRSR 177
Query: 174 KSKR-ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGM--FPNMFPLVTGQQFGALP 230
+ +SGFD AP A+ AG GQ+PG IPG+ PN++ L GQ F
Sbjct: 178 SKSKRVSGFDQAPTQQAVPIVAAGVIP-GQLPGVTAPIPGVGVLPNLYNLAAGQ-FNPHV 235
Query: 231 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 284
+ P QAMTQQATRHAR VYVGGLPPTANEQ+VA FF+ VMAAIGGNTAGPGDAV
Sbjct: 236 IQP-QAMTQQATRHARPVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAV 288
>gi|212539736|ref|XP_002150023.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067322|gb|EEA21414.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 551
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 169/365 (46%), Gaps = 60/365 (16%)
Query: 174 KSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQ------FG 227
+ +R++ +D+ PP + A + GMFP P QQ
Sbjct: 155 RKRRMTQWDIKPPGYDNVTA------------EQAKLSGMFP--LPGAPRQQAVDPSRLQ 200
Query: 228 ALPVMPVQAMTQQAT------RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 281
AL P T+ +T R A+R++ LPP + ++ +FF+ + G N
Sbjct: 201 ALVNQPSATTTESSTLRPANSRQAKRLFAYNLPPNVTDAALISFFN--LQLNGLNVIEGI 258
Query: 282 DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE----------GA-PVKVRRPSDY 330
D V+ I+ + FA +E + EA+ A+ALDGI E GA +++RRP DY
Sbjct: 259 DPCVSSQISKDHAFALLEFKGPNEATVALALDGISMEEHEAAATTNGGARGLELRRPKDY 318
Query: 331 NPSLAATLGPSQP---NPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 387
+ PS P P P S P+++ V +P Y E + LL+
Sbjct: 319 -------IVPSSPEDQQPYQEGVISNQVPDS------PNKLCVTNIPLYIPEEPVTMLLK 365
Query: 388 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN 447
S G LR F LVKD T S+G AFC Y D + T IA +LNG+++GDK L + A+ G
Sbjct: 366 SIGELRAFVLVKDSGTDESRGIAFCEYVDATATAIAVESLNGMELGDKHLKITHASIGVT 425
Query: 448 QPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
Q + L +++ ++V+ L +V+ADEL ++E+YEEILED++
Sbjct: 426 -----QAAGLDMGVNAMSMFAKTTSADLETTRVLQLLNMVTADELINNEDYEEILEDVQD 480
Query: 508 EGGKF 512
E K+
Sbjct: 481 ECSKY 485
>gi|345480698|ref|XP_001604333.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Nasonia
vitripennis]
Length = 455
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 134/261 (51%), Gaps = 71/261 (27%)
Query: 256 TANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI 315
+ +E + AMA DGI
Sbjct: 199 SIDETT----------------------------------------------QAMAFDGI 212
Query: 316 IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPY 375
F+G +K+RRP DY P T NP++N+ + P +IF+GGLP
Sbjct: 213 NFKGQSLKIRRPHDYQPMPGMT-----DNPSMNVP------------DSPHKIFIGGLPN 255
Query: 376 YFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDK 435
Y E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK
Sbjct: 256 YLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDK 315
Query: 436 TLTVRRANQGANQPKPEQESVLLHAQQQIALQ---RLMLQPGSVPSKVVCLTQVVSADEL 492
L V+RA+ GA P P ++ AQ + +Q M+ P++V+CL +V+ +EL
Sbjct: 316 KLIVQRASVGAKNPMP-----MIGAQAPVQIQVPGLSMVGTSGPPTEVLCLLNMVTPEEL 370
Query: 493 KDDEEYEEILEDMRQEGGKFA 513
++EEYE+ILED+++E K+
Sbjct: 371 MEEEEYEDILEDIKEECNKYG 391
>gi|212539738|ref|XP_002150024.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067323|gb|EEA21415.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 556
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 170/365 (46%), Gaps = 60/365 (16%)
Query: 174 KSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQ------FG 227
+ +R++ +D+ PP G A Q + GMFP P QQ
Sbjct: 155 RKRRMTQWDIKPP-------GYDNVTAEQA-----KLSGMFP--LPGAPRQQAVDPSRLQ 200
Query: 228 ALPVMPVQAMTQQAT------RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 281
AL P T+ +T R A+R++ LPP + ++ +FF+ + G N
Sbjct: 201 ALVNQPSATTTESSTLRPANSRQAKRLFAYNLPPNVTDAALISFFN--LQLNGLNVIEGI 258
Query: 282 DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE----------GA-PVKVRRPSDY 330
D V+ I+ + FA +E + EA+ A+ALDGI E GA +++RRP DY
Sbjct: 259 DPCVSSQISKDHAFALLEFKGPNEATVALALDGISMEEHEAAATTNGGARGLELRRPKDY 318
Query: 331 NPSLAATLGPSQP---NPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 387
+ PS P P P S P+++ V +P Y E + LL+
Sbjct: 319 -------IVPSSPEDQQPYQEGVISNQVPDS------PNKLCVTNIPLYIPEEPVTMLLK 365
Query: 388 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN 447
S G LR F LVKD T S+G AFC Y D + T IA +LNG+++GDK L + A+ G
Sbjct: 366 SIGELRAFVLVKDSGTDESRGIAFCEYVDATATAIAVESLNGMELGDKHLKITHASIGVT 425
Query: 448 QPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
Q + L +++ ++V+ L +V+ADEL ++E+YEEILED++
Sbjct: 426 -----QAAGLDMGVNAMSMFAKTTSADLETTRVLQLLNMVTADELINNEDYEEILEDVQD 480
Query: 508 EGGKF 512
E K+
Sbjct: 481 ECSKY 485
>gi|332026432|gb|EGI66560.1| Splicing factor U2AF 50 kDa subunit [Acromyrmex echinatior]
Length = 435
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 167/376 (44%), Gaps = 122/376 (32%)
Query: 180 GFDMAPPASA--MLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAM 237
GF+ P A ++ AAGQIP AN +V A+PV+
Sbjct: 76 GFEHITPLQARLLILYYKAMQAAGQIP-AN------------IVADTPQAAVPVV----- 117
Query: 238 TQQATRHARRVYVGGLPPTANEQSVATFF------------------------------- 266
TR ARR+YVG +P E+ + FF
Sbjct: 118 GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFL 177
Query: 267 --------SQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
+Q MA DGI F+
Sbjct: 178 EFRSIDETTQAMAF----------------------------------------DGINFK 197
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFT 378
G +K+RRP DY P T NP++N+ + P +IF+GGLP Y
Sbjct: 198 GQSLKIRRPHDYQPMPGMT-----DNPSMNVP------------DSPHKIFIGGLPNYLN 240
Query: 379 EAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 438
E Q++ELL SFG LR F+LVKD TG SKGYAFC Y D+S+TD A A LNG+++GDK L
Sbjct: 241 EEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI 300
Query: 439 VRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEE 497
V+RA+ GA P + A QI + L + S P ++V+CL +V+ +EL ++EE
Sbjct: 301 VQRASVGAKNPM-----IGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEE 355
Query: 498 YEEILEDMRQEGGKFA 513
YE+ILED+++E K+
Sbjct: 356 YEDILEDIKEECNKYG 371
>gi|156099808|ref|XP_001615700.1| U2 snRNP auxiliary factor [Plasmodium vivax Sal-1]
gi|148804574|gb|EDL45973.1| U2 snRNP auxiliary factor, putative [Plasmodium vivax]
Length = 914
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 154/310 (49%), Gaps = 37/310 (11%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA---GPGDAVVNVYI-----NH 291
+ + R++Y+G +PP + ++ + FF+ +A+I +++ GD V+ + N
Sbjct: 538 EGDKKQRKLYIGNIPPNSKQEELIDFFNNTLASIIKDSSLEIKIGDIVLLPILKCEIFNV 597
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY------NPSLAATLGPSQPNP 345
E +F F+E RS+E + LD I F +++ RP D+ +P+L
Sbjct: 598 ESRFCFLEFRSLEITWLCLRLDAISFNNYCLRIARPHDFVPPPGGDPALTVVFTDINHEV 657
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
+ V + P + G + +++++ LP+ + QIR+LL+ FG L+GF+++KD TG
Sbjct: 658 FEMVKPVKIAPVRSTG-DDDNKLYIQNLPHDLRDDQIRDLLQQFGKLKGFNIIKDLNTGL 716
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQE----------- 454
+KGY F Y+D + T IA ALNG G L V++A G +Q +
Sbjct: 717 NKGYGFFEYEDSNCTPIAMHALNGFVCGQNILNVKKATFGKSQNSTQNANTISLPTGSVD 776
Query: 455 ---SVLLHAQQQIALQRLML--------QPGSVPSKVVCLTQVVSADELKDDEEYEEILE 503
S+L ++ Q L ++ + G S+VV LT V ++L D +YEEIL
Sbjct: 777 LPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDLLIDSQYEEILR 836
Query: 504 DMRQEGGKFA 513
D+++E K+
Sbjct: 837 DIKEEAEKYG 846
>gi|119482894|ref|XP_001261475.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
gi|119409630|gb|EAW19578.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
Length = 563
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 168/353 (47%), Gaps = 34/353 (9%)
Query: 173 SKSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPV 231
++ +R++ +D+ PP + A A + +PGA P M P+ Q G
Sbjct: 166 TRKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRLQAFMNQPGGG--S 222
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
A+ +R ARR++V LP + + + +FF+ + G N D ++ I+
Sbjct: 223 ADNSALKPSNSRQARRLFVYNLPSVVSSEHLVSFFN--LQLNGLNVIHSVDPCISAQISE 280
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFE----------GAP--VKVRRPSDYNPSLAATLG 339
+ FA +E ++ + + A+A DGI E GAP ++VRRP DY +
Sbjct: 281 DHSFALLEFKTPNDTTVALAFDGITMEEHEPASGTENGAPKGLEVRRPKDYIVPNGSADQ 340
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
Q LN + P++I V +P Y E + LL+SFG L+ F LVK
Sbjct: 341 EYQEGVLLNEVP-----------DSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVK 389
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
D T S+G AFC Y D S T IA LNG+++GD+ L V RA+ G Q + L
Sbjct: 390 DSSTEESRGIAFCEYADPSATAIAVEGLNGMELGDRHLKVVRASIGMT-----QAAGLDM 444
Query: 460 AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+++ S+V+ L +V+ +EL D+++YEEI +D+R+E K+
Sbjct: 445 GVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELLDNDDYEEICDDVREECSKY 497
>gi|320031290|gb|EFW13263.1| splicing factor u2af large subunit [Coccidioides posadasii str.
Silveira]
Length = 545
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 147/283 (51%), Gaps = 31/283 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R A+R++V L P+ +E S+A FF+ + G N D V+ ++ + FA +E +
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFN--LQLNGLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 302 SVEEASNAMALDGIIFE-----------GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
+ +A+ A+A DG+ E + +RRP DY + PS+ + +
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDY-------IVPSETDDSNRQE 326
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
V S + P++I V +P + E Q+ LL SFG L+ F LVKD T S+G A
Sbjct: 327 GVV----SNEVPDSPNKICVTNIPPFIQEEQVTMLLVSFGELKSFILVKDSGTDESRGIA 382
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y D S T+IA LNG+++GDK L V RA+ GA Q V +A A
Sbjct: 383 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIGATQAAGLDMGV--NAMSMFAKTTSQ 440
Query: 471 -LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L+ G +V+ L +V+A+EL D+++YEEI +D+R E K+
Sbjct: 441 DLETG----RVLQLLNMVTAEELMDNDDYEEICDDVRDECSKY 479
>gi|221483471|gb|EEE21790.1| U2 snRNP auxiliary factor, putative [Toxoplasma gondii GT1]
gi|221507941|gb|EEE33528.1| U2 snRNP splicing factor, putative [Toxoplasma gondii VEG]
Length = 553
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 145/305 (47%), Gaps = 43/305 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT-------AGPGDAVVNV----YINH 291
R +R+YVG LPP + + V FF+ + A+ T A G+ ++ V N
Sbjct: 185 RKQKRLYVGNLPPGSTQPDVVGFFNGALLAVNAQTGFVKEDEATAGEQLLPVERCEVFNE 244
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
+F F+E+R+ + A + LDGI + G ++V RP DY P P +P
Sbjct: 245 SSRFCFIELRNEQYAILCVKLDGITYNGYSLRVGRPHDYVP-------PPGGDPAHQAYI 297
Query: 352 VGLTPGSAGGLE-----------GPD-RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
L E GPD +I++ LP E Q+R+LLE FG LR +L++
Sbjct: 298 PLLDDAKKVKREEKREKPSRPETGPDNKIYIQNLPPEMGEEQVRDLLEQFGTLRVLNLIR 357
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRAN-QGANQPKPEQESVLL 458
+ +TG KGY F Y+D VTD A ALNG G L+V+RAN G+ + ++ +
Sbjct: 358 NVQTGQHKGYGFFEYEDPEVTDQAILALNGFVCGANMLSVQRANFSGSVVTRETNRTMAV 417
Query: 459 HAQQQIALQRLMLQP------------GSVPSKVVCLTQVVSADELKDDEEYEEILEDMR 506
+ Q+L+ P G PSKVV L V ++L D +EYE I +D++
Sbjct: 418 TSLPNSMTQKLLSDPLVAVQVQAARKIGERPSKVVQLLNCVYQEDLIDPKEYEAICDDIK 477
Query: 507 QEGGK 511
QE K
Sbjct: 478 QEAEK 482
>gi|119189253|ref|XP_001245233.1| hypothetical protein CIMG_04674 [Coccidioides immitis RS]
gi|392868136|gb|EAS33879.2| U2 snRNP auxilliary factor, large subunit, splicing factor
[Coccidioides immitis RS]
Length = 545
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 147/283 (51%), Gaps = 31/283 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R A+R++V L P+ +E S+A FF+ + G N D V+ ++ + FA +E +
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFN--LQLNGLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 302 SVEEASNAMALDGIIFE-----------GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
+ +A+ A+A DG+ E + +RRP DY + PS+ + +
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDY-------IVPSETDDSNRQE 326
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
V S + P++I V +P + E Q+ LL SFG L+ F LVKD T S+G A
Sbjct: 327 GVV----SNEVPDSPNKICVTNIPPFIQEEQVTMLLVSFGELKSFVLVKDSGTDESRGIA 382
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y D S T+IA LNG+++GDK L V RA+ GA Q V +A A
Sbjct: 383 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIGATQAAGLDMGV--NAMSMFAKTTSQ 440
Query: 471 -LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L+ G +V+ L +V+A+EL D+++YEEI +D+R E K+
Sbjct: 441 DLETG----RVLQLLNMVTAEELMDNDDYEEICDDVRDECSKY 479
>gi|303323229|ref|XP_003071606.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240111308|gb|EER29461.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 545
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 146/283 (51%), Gaps = 31/283 (10%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R A+R++V L P+ +E S+A FF+ + G N D V+ ++ + FA +E +
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFN--LQLNGLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 302 SVEEASNAMALDGIIFE-----------GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
+ +A+ A+A DG+ E + +RRP DY + PS+ + +
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDY-------IVPSETDDSNRQE 326
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
V S + P +I V +P + E Q+ LL SFG L+ F LVKD T S+G A
Sbjct: 327 GVV----SNEVPDSPSKICVTNIPPFIQEEQVTMLLVSFGELKSFILVKDSGTDESRGIA 382
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y D S T+IA LNG+++GDK L V RA+ GA Q V +A A
Sbjct: 383 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIGATQAAGLDMGV--NAMSMFAKTTSQ 440
Query: 471 -LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L+ G +V+ L +V+A+EL D+++YEEI +D+R E K+
Sbjct: 441 DLETG----RVLQLLNMVTAEELMDNDDYEEICDDVRDECSKY 479
>gi|121711505|ref|XP_001273368.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
gi|119401519|gb|EAW11942.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
Length = 583
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 173 SKSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPV 231
++ +R++ +D+ PP + A A + +PGA P M P+ Q G
Sbjct: 167 TRKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRLQAFMNQPGGG--S 223
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
A+ +R A+R++V LPP + + + +FF+ + G N D ++ I+
Sbjct: 224 ADNAALKPSNSRQAKRLFVYNLPPGVSNEHLVSFFN--LQLNGLNVIHNVDPCISAQISE 281
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFE-----------GAP--VKVRRPSDYNPSLAATL 338
+ FA +E +S + + A+A DGI E GA ++VRRP DY +
Sbjct: 282 DHTFALLEFKSPNDTTVALAFDGITMEEHEAMGAGAENGASKGLEVRRPKDYVVPNGSAD 341
Query: 339 GPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV 398
Q LN + P++I V +P Y E + LL+SFG L+ F LV
Sbjct: 342 QEYQEGVLLNEVP-----------DSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLV 390
Query: 399 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 458
KD T S+G AFC Y D S T IA LNG+++GD+ L V RA+ G Q V
Sbjct: 391 KDSSTEESRGIAFCEYADPSATPIAVEGLNGMELGDRHLKVVRASIGMTQAVGLDMGV-- 448
Query: 459 HAQQQIALQRLM-LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+A A L+ G +V+ L +V+ +EL D+++YEEI +D+R+E K+
Sbjct: 449 NAMSMFAKTTSQDLESG----RVLQLLNMVTPEELMDNDDYEEICDDVREECSKY 499
>gi|237839189|ref|XP_002368892.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
gi|211966556|gb|EEB01752.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
Length = 553
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 145/305 (47%), Gaps = 43/305 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT-------AGPGDAVVNV----YINH 291
R +R+YVG LPP + + V FF+ + A+ T A G+ ++ V N
Sbjct: 185 RKQKRLYVGNLPPGSTQPDVVGFFNGALLAVNAQTGFVKEDEATAGEQLLPVERCEVFNE 244
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
+F F+E+R+ + A + LDGI + G ++V RP DY P P +P
Sbjct: 245 SSRFCFIELRNEQYAILCVKLDGITYNGYSLRVGRPHDYVP-------PPGGDPAHQAYI 297
Query: 352 VGLTPGSAGGLE-----------GPD-RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
L E GP+ +I++ LP E Q+R+LLE FG LR +L++
Sbjct: 298 PLLDDAKKVKREEKREKPSRPETGPNNKIYIQNLPPEMGEEQVRDLLEQFGTLRVLNLIR 357
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRAN-QGANQPKPEQESVLL 458
+ +TG KGY F Y+D VTD A ALNG G L+V+RAN G+ + ++ +
Sbjct: 358 NVQTGQHKGYGFFEYEDPEVTDQAILALNGFVCGANMLSVQRANFSGSVVTRETNRTMAV 417
Query: 459 HAQQQIALQRLMLQP------------GSVPSKVVCLTQVVSADELKDDEEYEEILEDMR 506
+ Q+L+ P G PSKVV L V ++L D +EYE I +D++
Sbjct: 418 TSLPNSMTQKLLSDPLVAVQVQAARKIGERPSKVVQLLNCVYQEDLIDPKEYEAICDDIK 477
Query: 507 QEGGK 511
QE K
Sbjct: 478 QEAEK 482
>gi|425775779|gb|EKV14031.1| Splicing factor u2af large subunit [Penicillium digitatum PHI26]
Length = 585
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 32/348 (9%)
Query: 173 SKSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA---NPAIPGMFPNMFPLVTGQQFGA 228
++ +R++ +DM PP + A A + +PGA P P + TG A
Sbjct: 204 TRKRRLTQWDMKPPGYENVTAEQAKISGMFPLPGAPRQQPMDPSRMKDFLNPPTGDSDNA 263
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVY 288
A+ +R ++R++V +P + +V FF+ + G N D ++
Sbjct: 264 -------ALKPSNSRQSKRLFVYNIPSGVSGDAVIAFFN--LQLNGLNVVHSVDPCISAQ 314
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAP---VKVRRPSDYNPSLAATLGPSQPNP 345
++ +K FA +E + +A+ A+A DGI + ++VRRP DY + P Q
Sbjct: 315 VSEDKTFALLEFKDPNDATVALAFDGITMAESGDKGLEVRRPKDYIVPDGSASQPVQAGV 374
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
LN + P++I + +P Y E I LL+SFG L+ F LVKD T
Sbjct: 375 VLNEVP-----------DSPNKICISNIPTYINEEAIIMLLKSFGDLKSFVLVKDAATEE 423
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
S+G AF Y D + T +A LNG+++ D+ L RA+ G Q V +A Q A
Sbjct: 424 SRGIAFYEYVDPNNTALAVEGLNGMELVDRHLKFVRASIGTTQASGLDMGV--NAMQMFA 481
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ Q ++V+ L +V+ DEL +DE+YEEI+ED+ E KF
Sbjct: 482 --KTTSQDLET-TQVLQLLNMVTLDELLNDEDYEEIMEDVSDECSKFG 526
>gi|71996475|ref|NP_001022967.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
gi|6226906|sp|P90978.2|U2AF2_CAEEL RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|3334906|gb|AAC26982.1| splicing factor U2AF65 [Caenorhabditis elegans]
gi|351018334|emb|CCD62278.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
Length = 496
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 138/313 (44%), Gaps = 97/313 (30%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
T +RR+YVG +P NE+++ FF+Q M G A PG+ ++ IN +K FAF+E
Sbjct: 179 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQA-PGNPILLCQINLDKNFAFIEF 237
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS--------------------------- 333
RS++E + MA DGI F G +KVRRP DY PS
Sbjct: 238 RSIDETTAGMAFDGINFMGQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGG 297
Query: 334 ------------LAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
L + GP
Sbjct: 298 LPNYLTEDQVKELLCSFGP----------------------------------------- 316
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
L+ F L D + GNSKGYAF Y D ++TD A A LNG+++GDK L V+
Sbjct: 317 ----------LKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQL 365
Query: 442 ANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEI 501
A ANQ + + L ++ IA L G ++++CL +V+ DELK D+EYEEI
Sbjct: 366 A--CANQQR--HNTNLPNSASAIAGIDLSQGAGRA-TEILCLMNMVTEDELKADDEYEEI 420
Query: 502 LEDMRQEGGKFAF 514
LED+R E K+
Sbjct: 421 LEDVRDECSKYGI 433
>gi|425773483|gb|EKV11835.1| Splicing factor u2af large subunit [Penicillium digitatum Pd1]
Length = 585
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 164/347 (47%), Gaps = 32/347 (9%)
Query: 173 SKSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA---NPAIPGMFPNMFPLVTGQQFGA 228
++ +R++ +DM PP + A A + +PGA P P + TG A
Sbjct: 204 TRKRRLTQWDMKPPGYENVTAEQAKISGMFPLPGAPRQQPMDPSRMKDFLNPPTGDSDNA 263
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVY 288
A+ +R ++R++V +P + +V FF+ + G N D ++
Sbjct: 264 -------ALKPSNSRQSKRLFVYNIPSGVSGDAVIAFFN--LQLNGLNVVHSVDPCISAQ 314
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAP---VKVRRPSDYNPSLAATLGPSQPNP 345
++ +K FA +E + +A+ A+A DGI + ++VRRP DY + P Q
Sbjct: 315 VSEDKTFALLEFKDPNDATVALAFDGITMAESGDKGLEVRRPKDYIVPDGSASQPVQAGV 374
Query: 346 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN 405
LN + P++I + +P Y E I LL+SFG L+ F LVKD T
Sbjct: 375 VLNEVP-----------DSPNKICISNIPTYINEEAIIMLLKSFGDLKSFVLVKDAATEE 423
Query: 406 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
S+G AF Y D + T +A LNG+++ D+ L RA+ G Q V +A Q A
Sbjct: 424 SRGIAFYEYVDPNNTALAVEGLNGMELVDRHLKFVRASIGTTQASGLDMGV--NAMQMFA 481
Query: 466 LQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q ++V+ L +V+ DEL +DE+YEEI+ED+ E KF
Sbjct: 482 --KTTSQDLET-TQVLQLLNMVTLDELLNDEDYEEIMEDVSDECSKF 525
>gi|326428095|gb|EGD73665.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Salpingoeca sp. ATCC 50818]
Length = 415
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 124/229 (54%), Gaps = 21/229 (9%)
Query: 219 PLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA 278
PL TG AL +P+ R++ V LP + + +F + +A+
Sbjct: 18 PLYTGDSDEALLNVPLPT---------RQLVVENLPEGTRDHDLMSFMNDCIAS-NKLIT 67
Query: 279 GPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN-PSLAAT 337
PG V+ ++ + K A +E RSV+EA+N + D F+GA ++VRRP +Y P T
Sbjct: 68 QPGQPVIKCTLSEDGKSAVLEFRSVDEATNGLVFDRERFKGAQLRVRRPDNYEAPKGHIT 127
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
P Q N+ SA + P +I++GG+P Y +E Q++ELLE FG L+ F L
Sbjct: 128 RIPMQSGANV----------SAVVQDSPYKIYIGGIPPYLSEEQVKELLEPFGQLKSFHL 177
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
V D TG SKG+AFC Y D ++TD ALN +++G+K L V+RA+ GA
Sbjct: 178 VMDTSTGQSKGFAFCEYMDPAITDTMIGALNDLRIGEKRLLVQRASIGA 226
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 476 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
V ++++ L +V+ DEL+DDEEYE+I D+R+E KF
Sbjct: 309 VATRILILMNMVTVDELRDDEEYEDICADIREECEKF 345
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 140/313 (44%), Gaps = 64/313 (20%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
A + AR +YVG LPP + F S ++ +G T PG+ ++N + + + FAF EM
Sbjct: 242 AQKPARELYVGNLPPNVTGPQLQEFLSTIIQQVGLTTQ-PGNPIINTWTSTDGHFAFCEM 300
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN------LAAVGL 354
RSVEE + A+ L+ + G P+K RP + +GP QP P ++ L +G
Sbjct: 301 RSVEECNLALLLNQLSLLGQPLKFGRPRSF-------MGPPQPMPQVSARTQTALTNLGC 353
Query: 355 TPGSAG-----------------------------------GLEGPDRIFVGGLPYYFTE 379
TP A + +R+ + +P E
Sbjct: 354 TPNPAWFAQHTVSSTETTTTETTLAEATLSAIAAAQPAGSEAVSSGNRLIMSNIPVVLAE 413
Query: 380 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
Q++EL+E FG L+ F LVKD TG S G A Y+D V A LNG+ +G L+V
Sbjct: 414 EQVKELVEPFGKLKSFTLVKDSATGASLGSALFEYEDSDVAAQAVEGLNGLSIGGILLSV 473
Query: 440 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE 499
+R + P + Q PS V+ + +VS DEL+DDEEY
Sbjct: 474 QRQPASSAAALPSAAAANPEDQ---------------PSAVLKMANMVSIDELRDDEEYA 518
Query: 500 EILEDMRQEGGKF 512
++ ED+ +E +F
Sbjct: 519 DLAEDVEEECKRF 531
>gi|115400045|ref|XP_001215611.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
gi|114191277|gb|EAU32977.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
Length = 413
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 169/368 (45%), Gaps = 66/368 (17%)
Query: 174 KSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMP 233
+ +R++ +D+ PP + A + GMFP P QQ P+ P
Sbjct: 22 RKRRLTQWDIKPPGYENVTA------------EQAKLSGMFP--LPGAPRQQ----PMDP 63
Query: 234 --VQAMTQQAT--------------RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT 277
+QA Q+T R A+R++V +PP +++ +FF+ + G N
Sbjct: 64 SRLQAFMNQSTTGSADAASLKPSHSRQAKRLFVYNIPPNVTGEALLSFFN--LQLNGLNV 121
Query: 278 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF------------EGAPVKVR 325
D ++ ++ + FA +E +S EA+ A+A DGI E ++VR
Sbjct: 122 VQSVDPCISAQVSDDHSFALLEFKSPNEATVALAFDGITMDEHASMDGAGKGEVKGLEVR 181
Query: 326 RPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIREL 385
RP DY + Q LN + P++I V +P Y E + L
Sbjct: 182 RPKDYIVPNGSADQEYQEGVLLNEVP-----------DSPNKICVSNIPQYIQEEAVIML 230
Query: 386 LESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG 445
L+SFG L+ F LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G
Sbjct: 231 LKSFGELKSFVLVKDASTEESRGIAFCEYADPTATSIAVEGLNGMEIGDRPLKVVRASIG 290
Query: 446 ANQPKPEQESV-LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILED 504
Q V + + Q L S+V+ L +V+A+EL D+++YEEI ED
Sbjct: 291 MTQAAGLDMGVNAMSMFAKTTSQDLET------SRVLQLLNMVTAEELIDNDDYEEICED 344
Query: 505 MRQEGGKF 512
+R+E K+
Sbjct: 345 VREECSKY 352
>gi|452979953|gb|EME79715.1| hypothetical protein MYCFIDRAFT_81194 [Pseudocercospora fijiensis
CIRAD86]
Length = 552
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 59/333 (17%)
Query: 221 VTGQQF---GALPV-----------MPVQAMTQQ-------------ATRHARRVYVGGL 253
VT +Q G P+ +QA Q + R ++R+ + +
Sbjct: 174 VTAEQAKLSGMFPLPGAPRQQPMDPQKLQAFMNQPGNQASSTALKPSSARQSKRLLIHNI 233
Query: 254 PPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALD 313
P A + ++ FF+ + G N D V+ I+ E +A VE ++ E+A+NAMA D
Sbjct: 234 PAAATDDNIVDFFN--LQLNGLNVTRGQDPCVSAQISKENGYALVEFKTPEDATNAMAFD 291
Query: 314 GIIF-------------EGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAG 360
GI ++++RP DY + + NP+ L+ G+ P +
Sbjct: 292 GINMMPDAMDTNGDSNGTAKGLQIKRPKDY---IVPNVTDETENPSGILS--GVVPDTQ- 345
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVT 420
++I + LP + E QI+ELL SFG LR F LVKD T S+G AFC Y+D SVT
Sbjct: 346 -----NKISITNLPTFLGEDQIQELLNSFGELRNFVLVKDTSTEESRGIAFCEYKDPSVT 400
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKV 480
A +LNG+++GD + V+ A+ G Q P + SV ++L G+ +V
Sbjct: 401 KTAVESLNGMELGDAAMKVKLASIGIQQ-VPGEMSV-----NAMSLMAGTQAEGTEKGRV 454
Query: 481 VCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+CL +++ +EL D +E +EIL D+++E K+
Sbjct: 455 LCLMNMITPEELMDADEADEILVDVKEEVSKYG 487
>gi|325179530|emb|CCA13927.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 833
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 166/390 (42%), Gaps = 105/390 (26%)
Query: 178 ISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGA-LPVMPVQA 236
+SG D P + ++ +P ++ Q A + V
Sbjct: 428 VSG-DGTPSITQLM------------------------QQYPTLSLQDIIAKMQASNVTM 462
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
A + AR +YVG LP T + F ++ +G +T PG+ +++V+I+ + FA
Sbjct: 463 AAAVAMKPARELYVGNLPATITGPQLQEFLGTIIQQVGLSTQ-PGNPILSVWISTDGHFA 521
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN------LA 350
F EMRSVEE + A+ L+ + G P+K RP + +GP QP P ++ L
Sbjct: 522 FCEMRSVEECNLALLLNQLPLLGQPLKFGRPRSF-------MGPPQPMPIVSARTQTALV 574
Query: 351 AVGLTP------------------GSAGGLEG---------------------------P 365
+G TP G GL G
Sbjct: 575 NLGCTPNPVWFASPDVTSFGSDPMGFGNGLNGFLSSSSSSLMSATALADSLASLPSDPNA 634
Query: 366 DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 425
++ + +P E Q++EL++ FG LR F L+KD TG S G AF YQ+ VT A
Sbjct: 635 TQLLMSNIPGVLAEEQVKELVQPFGELRFFKLIKDPITGQSTGTAFFEYQENQVTTEALN 694
Query: 426 ALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV---PSKVVC 482
L+G+ +G L+VRRA P QIA+ L PG+ P V+
Sbjct: 695 GLDGLDIGGVKLSVRRAPDATKYP-------------QIAV----LMPGAAGEEPGPVLR 737
Query: 483 LTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ +VS DELK+DEE+ ++ ED+ +E +F
Sbjct: 738 MANMVSEDELKNDEEFADLKEDVEEECKRF 767
>gi|326475623|gb|EGD99632.1| splicing factor u2af large subunit [Trichophyton tonsurans CBS
112818]
gi|326483752|gb|EGE07762.1| splicing factor U2AF subunit [Trichophyton equinum CBS 127.97]
Length = 565
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 169/365 (46%), Gaps = 50/365 (13%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA------NPAIPGMFPNMFPLVTGQQF 226
+ +R++ +D+ PP + A A + +PGA +P+ F N P +G
Sbjct: 156 RKRRLTQWDIKPPGYENVTAEQAKVSGMFPLPGAPRQQAVDPSRLQAFMNP-PAASGSSN 214
Query: 227 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN 286
L + +R ++R++ +PP+ E ++ FF+ + G N D +
Sbjct: 215 NTL-------LKPSNSRQSKRLFAHNIPPSVTEDTLQQFFN--LQLNGLNVISGVDPCQS 265
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFE------------GAPVK---VRRPSDYN 331
V I+ + KFA +E + +A+ A+A DGI E VK + RP DY
Sbjct: 266 VQISKDGKFALLEFNTAADATVALAFDGITMEEHEANRESNGESNGEVKGLTIVRPKDYI 325
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
L P+ P P S P++I V +P + E Q+ LL SFG
Sbjct: 326 VPL-----PTDEEPRQEGVVSSNVPDS------PNKICVSNIPPFIQEDQVTMLLVSFGE 374
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKP 451
L+ F LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G Q
Sbjct: 375 LKSFVLVKDVGTDESRGIAFCEYLDPASTGIAVEGLNGMELGDRRLKVNRASIGTVQAAG 434
Query: 452 EQESVLLHAQQQIALQRLM-LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
V +A A L+ G +V+ L +V+ADEL D+E+YEEI ED+++E
Sbjct: 435 LDMGV--NAMSMFAKTTSQDLETG----RVLQLLNMVTADELIDNEDYEEICEDVQEECS 488
Query: 511 KFAFC 515
K+
Sbjct: 489 KYGVV 493
>gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis]
Length = 600
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 374 PYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMG 433
P +++ELL SFGPL+ F+LVKD T SKGYAFC Y D+ TD A A LNG+++G
Sbjct: 399 PGVCAGVKVKELLTSFGPLKAFNLVKDGATSLSKGYAFCEYVDVGATDQAVAGLNGMQLG 458
Query: 434 DKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELK 493
DK L V+RA+ GA P + Q LQR LQ VP++V+CL +V +EL
Sbjct: 459 DKKLIVQRASVGAKNANPSAAAEAPVTLQVPGLQR--LQTSGVPTEVLCLLNMVVPEELV 516
Query: 494 DDEEYEEILEDMRQEGGKF 512
DDE+YEEILED+R+E K+
Sbjct: 517 DDEDYEEILEDVREECCKY 535
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Query: 167 SRSRSRSKSKRIS-GFDMAPPASAMLAAGAGAAAAGQ----IPGANPAIPGMFPNMFPLV 221
S S RS+ KR+ +D+ PP + A G+ +PG P +P + +++P
Sbjct: 75 SHSPKRSRKKRVCRYWDVPPPGFEHITPLQYKAMQGRAPPRLPGPAPRLPSV--SLWPPA 132
Query: 222 TGQQFGALPVM----------------PVQAMTQQATRHARRVYVGGLPPTANE------ 259
GQ +P M PV Q TR ARR+YVG +P E
Sbjct: 133 AGQ----IPTMALLATAASAGVVAAPTPVPVAGSQMTRQARRLYVGNIPFGLTEALRRLC 188
Query: 260 ---QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+S+A FF+ M + G + P + V+ V IN +K FAF+E+R
Sbjct: 189 SPQESMAEFFNAQM-RLAGLSQAPSNPVLAVQINQDKNFAFLEVR 232
>gi|307106441|gb|EFN54687.1| hypothetical protein CHLNCDRAFT_53018 [Chlorella variabilis]
Length = 247
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 111/209 (53%), Gaps = 36/209 (17%)
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN-VYINHEK 293
Q A R A+RVYVG LP +E + +++M G GD + N ++ +K
Sbjct: 68 QLFNPDAARPAKRVYVGNLPAAVSEAELRQAVNELM--------GNGDLLFNGMHQVQDK 119
Query: 294 KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG 353
+AFVE RSVEEASNAMALDG+ F + +K+ VG
Sbjct: 120 GYAFVEFRSVEEASNAMALDGVKFHDSYLKL---------------------------VG 152
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
L + P ++F+GGLP ++E Q++E+L FG L+ F+LV DR TGNSKGYAF
Sbjct: 153 LEVVKTVVQDSPHKLFIGGLPCDWSEDQVKEMLMPFGQLKAFNLVMDRGTGNSKGYAFAE 212
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTVRRA 442
+ D+ VTDI LNG K LTV+RA
Sbjct: 213 FMDVHVTDIVIQNLNGKPCNTKFLTVKRA 241
>gi|167515386|ref|XP_001742034.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
gi|163778658|gb|EDQ92272.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
Length = 431
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 166/374 (44%), Gaps = 47/374 (12%)
Query: 158 RGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNM 217
R RS R RS R + +D+ PP M P +
Sbjct: 20 RSRSLERDSRRSSERDAPEPSEAWDVPPPGYE----------------------NMPPKV 57
Query: 218 FPLVTGQQFGALPV---MPV--QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
+ F LP+ +P +M TR ARR+YVGG+P AN+ +A FF+ +
Sbjct: 58 YKDYVCTYFAGLPISAELPGLRSSMPNPLTRGARRLYVGGIPNGANDMELAEFFNMQLTQ 117
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
G T GPG VV+ IN EK FAF+E+RS EEA++ +A D I+F G +++RRP DY
Sbjct: 118 -QGLTIGPGAPVVSAQINEEKSFAFLELRSPEEATSCIAFDNIMFMGNQLRIRRPKDYQ- 175
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGG--------LEGPDRIFVGGLPYYFTEAQIRE 384
A G + P +++ P L R+ V +P E Q+RE
Sbjct: 176 ---APAGGTSEVPKVDMPMPRPMPMPTPMPMPTPMPMLVPSGRLNVTNIPLAMDEEQLRE 232
Query: 385 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI---ACAALNGIKMGDKTLTVRR 441
L FG + +L K+ ET G A + D D A L I + L V +
Sbjct: 233 LFSVFGTIASLELRKEPETDKFAGDAIVEF-DTRAPDFLNQVKAGLEDIDFEGQKLKVEQ 291
Query: 442 ANQGANQPKPEQESV---LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEY 498
+ + + L++A + P ++V+ L +V+ +EL+DDEEY
Sbjct: 292 VVRWWSYCGLRASYIAPSLVNASPFVGGAAAPAVPDVEATEVLVLMNMVTKEELQDDEEY 351
Query: 499 EEILEDMRQEGGKF 512
++I+ED+R+E GKF
Sbjct: 352 KDIMEDIREECGKF 365
>gi|327297188|ref|XP_003233288.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
gi|326464594|gb|EGD90047.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
Length = 563
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 168/365 (46%), Gaps = 50/365 (13%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA------NPAIPGMFPNMFPLVTGQQF 226
+ +R++ +D+ PP + A A + +PGA +P+ F N P +G
Sbjct: 156 RKRRLTQWDIKPPGYENVTAEQAKVSGMFPLPGAPRQQAVDPSRLQAFMNP-PAASGSGN 214
Query: 227 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN 286
L + +R ++R++ +PP E ++ FF+ + G N D +
Sbjct: 215 NTL-------LKPSNSRQSKRLFAHNIPPNVTEDTLQQFFN--LQLNGLNVISGVDPCQS 265
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFE------------GAPVK---VRRPSDYN 331
V I+ + KFA +E + +A+ A+A DGI E VK + RP DY
Sbjct: 266 VQISKDGKFALLEFNTAADATVALAFDGITMEEHEANRESNGESNGNVKGLTIVRPKDYI 325
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
L P+ P P S P++I V +P + E Q+ LL SFG
Sbjct: 326 VPL-----PTDEEPRQEGVVSSNVPDS------PNKICVSNIPPFIQEDQVTMLLVSFGE 374
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKP 451
L+ F LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G Q
Sbjct: 375 LKSFVLVKDVGTDESRGIAFCEYLDSASTGIAVEGLNGMELGDRRLKVNRASIGTVQAAG 434
Query: 452 EQESVLLHAQQQIALQRLM-LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
V +A A L+ G +V+ L +V+ADEL D+E+YEEI ED+++E
Sbjct: 435 LDMGV--NAMSMFAKTTSQDLETG----RVLQLLNMVTADELIDNEDYEEICEDVQEECS 488
Query: 511 KFAFC 515
K+
Sbjct: 489 KYGVV 493
>gi|317029342|ref|XP_001391373.2| splicing factor u2af large subunit [Aspergillus niger CBS 513.88]
Length = 561
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 164/365 (44%), Gaps = 60/365 (16%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q G
Sbjct: 165 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRLQAFMNQPAGG--NA 221
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
+ +R A+R++V +P + +++ FF+ + G N D ++ + +
Sbjct: 222 DTSTLKPSNSRQAKRLFVYNIPESVTGETLLAFFNVQLN--GLNVIQSVDPCISAQVAQD 279
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE-------------GAPVKVRRPSDYNPSLAATLG 339
FA +E +S +A+ A+A DGI E ++VRRP DY
Sbjct: 280 HTFALLEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQGLEVRRPKDY--------- 330
Query: 340 PSQPNPNLNLAAVGLTPGSA------GGL-----EGPDRIFVGGLPYYFTEAQIRELLES 388
+ PG A G L + P++I V +P+Y E + LL+S
Sbjct: 331 --------------IVPGGAEQEYQEGVLLNEVPDSPNKICVSNIPHYIPEEPVTMLLKS 376
Query: 389 FGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ 448
FG L+ F LVKD T S+G AFC Y D S T IA LNG+++GD+ L V RA+ G Q
Sbjct: 377 FGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHLKVVRASIGMTQ 436
Query: 449 PKPEQESV-LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
V + + Q L S+V+ L +V+ +EL D E+Y+EI +D+R
Sbjct: 437 AAGLDMGVNAMSMFAKTTSQDLET------SRVLQLLNMVTPEELMDPEDYDEICDDVRD 490
Query: 508 EGGKF 512
E K+
Sbjct: 491 ECSKY 495
>gi|402073699|gb|EJT69251.1| splicing factor U2AF 50 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 623
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 43/291 (14%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
+R ++R+ V P E+++ F + + + N D + + + FA +E R
Sbjct: 292 SRQSKRLIVTNFAPGTTEEALVAFMNLQLNGL--NVIESTDPCLLCQMAPDSSFAILEFR 349
Query: 302 SVEEASNAMALDGIIFE-----------GAP--VKVRRPSDY-NPSLAATLGPSQPNPNL 347
S E + A+ALDGI E G P +++RRP DY P++ G +
Sbjct: 350 SPAETTVALALDGITMEAEDTPMEGAANGTPQGLELRRPKDYIVPAVVEDTGYER----- 404
Query: 348 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
G+ S+ ++ P +I + L Y TE Q+ ELL SFG L+ LVKD T S+
Sbjct: 405 -----GVV--SSRVVDTPHKIGITNLAPYLTEEQVTELLVSFGELKALVLVKDSGTEESR 457
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
G AFC Y D TD+A LN +++G+K L V++A+ G Q + ++ +
Sbjct: 458 GIAFCEYVDPVATDVAIHGLNNMELGEKRLRVKKASIGITQV----------SGIEMGIN 507
Query: 468 RLMLQPGSVP-----SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ + G+V S+V+ L +V+ADEL D+++YEEI +D+R+E KF
Sbjct: 508 AMSMLAGTVAQDPDLSRVLQLLNMVTADELLDNDDYEEICDDVREECSKFG 558
>gi|317139209|ref|XP_001817348.2| splicing factor u2af large subunit [Aspergillus oryzae RIB40]
Length = 538
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 173/357 (48%), Gaps = 44/357 (12%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALP-- 230
+ +R++ +D+ PP + A A + +PGA P M P+ Q F + P
Sbjct: 142 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRL-----QAFMSQPGA 195
Query: 231 -VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
++ +R A+R++V LP +A +++ +FF+ + G N D ++ +
Sbjct: 196 GTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFN--LQLNGLNVIHSVDPCISAQV 253
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAP-------------VKVRRPSDYNPSLAA 336
+ ++ FA +E ++ +A+ A+A DGI + + ++VRRP DY
Sbjct: 254 SDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQGLEVRRPKDY------ 307
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
P+ N G+ + P++I V +P+Y E + LL+SFG L+ F
Sbjct: 308 ----IVPSGNEQEYQEGVLLNEVP--DSPNKICVSNIPHYIPEEPVTMLLKSFGELKSFV 361
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G Q V
Sbjct: 362 LVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVVRASIGITQAAGLDMGV 421
Query: 457 -LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ + Q L S+V+ L +V+ +EL D+++Y+EI +D+R+E K+
Sbjct: 422 NAMSMFAKTTSQDLET------SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKY 472
>gi|391864554|gb|EIT73849.1| splicing factor U2AF, large subunit [Aspergillus oryzae 3.042]
Length = 538
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 173/357 (48%), Gaps = 44/357 (12%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALP-- 230
+ +R++ +D+ PP + A A + +PGA P M P+ Q F + P
Sbjct: 142 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRL-----QAFMSQPGA 195
Query: 231 -VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
++ +R A+R++V LP +A +++ +FF+ + G N D ++ +
Sbjct: 196 GTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFN--LQLNGLNVIHSVDPCISAQV 253
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAP-------------VKVRRPSDYNPSLAA 336
+ ++ FA +E ++ +A+ A+A DGI + + ++VRRP DY
Sbjct: 254 SDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQGLEVRRPKDY------ 307
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
P+ N G+ + P++I V +P+Y E + LL+SFG L+ F
Sbjct: 308 ----IVPSGNEQEYQEGVLLNEVP--DSPNKICVSNIPHYIPEEPVTMLLKSFGELKSFV 361
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G Q V
Sbjct: 362 LVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVVRASIGITQAAGLDMGV 421
Query: 457 -LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ + Q L S+V+ L +V+ +EL D+++Y+EI +D+R+E K+
Sbjct: 422 NAMSMFAKTTSQDLET------SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKY 472
>gi|296811258|ref|XP_002845967.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843355|gb|EEQ33017.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 557
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 169/365 (46%), Gaps = 50/365 (13%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGA------NPAIPGMFPNMFPLVTGQQF 226
+ +R++ +D+ PP + A A + +PGA +P+ F N P +G
Sbjct: 157 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGAPRQQAVDPSRLQAFINP-PTASGSSN 215
Query: 227 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN 286
L + +R ++R++ +PP+ E ++ FF+ + G N D +
Sbjct: 216 NTL-------LKPSNSRQSKRLFAHNIPPSVTEDTLQQFFN--LQLNGLNVISGVDPCQS 266
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFE------------GAPVK---VRRPSDYN 331
V I+ + KFA +E + +A+ A+A DGI E VK + RP DY
Sbjct: 267 VQISKDGKFALLEFNTAADATVALAFDGITMEEHEANQESNGESNGQVKGLSIVRPKDYI 326
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
L P++ P P S P++I V +P + E Q+ LL SFG
Sbjct: 327 VPL-----PTEEEPRQEGVLSSNVPDS------PNKICVSNIPPFIQEDQVTMLLISFGE 375
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKP 451
L+ F LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G Q
Sbjct: 376 LKSFVLVKDVGTDESRGIAFCEYLDPASTGIAVEGLNGMELGDRRLKVNRASIGTVQAAG 435
Query: 452 EQESVLLHAQQQIALQRLM-LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
V +A A L+ G +V+ L +V+ADEL D+++YEEI ED++ E
Sbjct: 436 LDMGV--NAMSMFAKTTSQDLETG----RVLQLLNMVTADELIDNDDYEEICEDVQDECS 489
Query: 511 KFAFC 515
K+
Sbjct: 490 KYGVV 494
>gi|76154831|gb|AAX26240.2| SJCHGC03157 protein [Schistosoma japonicum]
Length = 258
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 115/200 (57%), Gaps = 17/200 (8%)
Query: 322 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
+K RRP + P L + S P + V + P +IFVGGLPYY E Q
Sbjct: 4 LKFRRPRVFAPLLGVSEQQSVIVPGVVSTVVQ---------DSPHKIFVGGLPYYLNEDQ 54
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
++ELL SFGPL+GF+LVKD TG SKGYAFC Y D +VTD ACA LNG+++GDK L V+R
Sbjct: 55 VKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDSNVTDHACAGLNGMQLGDKKLIVQR 114
Query: 442 ANQGANQPKPEQESVLLH--------AQQQIALQRLMLQPGSVPSKVVCLTQVVSADELK 493
A+ GA LL Q L ++ G P++V+CL ++ EL+
Sbjct: 115 ASVGAKHTTGVLPQCLLQMSGLEEGAVQNTTGSGNLTVRSGGPPTEVLCLMNMIETSELE 174
Query: 494 DDEEYEEILEDMRQEGGKFA 513
DDEEYE+I+ED+R E K+
Sbjct: 175 DDEEYEDIVEDVRAECSKYG 194
>gi|238482353|ref|XP_002372415.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
gi|220700465|gb|EED56803.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
Length = 556
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 173/357 (48%), Gaps = 44/357 (12%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALP-- 230
+ +R++ +D+ PP + A A + +PGA P M P+ Q F + P
Sbjct: 160 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRL-----QAFMSQPGA 213
Query: 231 -VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
++ +R A+R++V LP +A +++ +FF+ + G N D ++ +
Sbjct: 214 GTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFN--LQLNGLNVIHSVDPCISAQV 271
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAP-------------VKVRRPSDYNPSLAA 336
+ ++ FA +E ++ +A+ A+A DGI + + ++VRRP DY
Sbjct: 272 SDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQGLEVRRPKDY------ 325
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
P+ N G+ + P++I V +P+Y E + LL+SFG L+ F
Sbjct: 326 ----IVPSGNEQEYQEGVLLNEVP--DSPNKICVSNIPHYIPEEPVTMLLKSFGELKSFV 379
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G Q V
Sbjct: 380 LVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVVRASIGITQAAGLDMGV 439
Query: 457 -LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ + Q L S+V+ L +V+ +EL D+++Y+EI +D+R+E K+
Sbjct: 440 NAMSMFAKTTSQDLET------SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKY 490
>gi|134075845|emb|CAL00224.1| unnamed protein product [Aspergillus niger]
Length = 598
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 164/365 (44%), Gaps = 60/365 (16%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q G
Sbjct: 182 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRLQAFMNQPAGG--NA 238
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
+ +R A+R++V +P + +++ FF+ + G N D ++ + +
Sbjct: 239 DTSTLKPSNSRQAKRLFVYNIPESVTGETLLAFFNVQLN--GLNVIQSVDPCISAQVAQD 296
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE-------------GAPVKVRRPSDYNPSLAATLG 339
FA +E +S +A+ A+A DGI E ++VRRP DY
Sbjct: 297 HTFALLEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQGLEVRRPKDY--------- 347
Query: 340 PSQPNPNLNLAAVGLTPGSA------GGL-----EGPDRIFVGGLPYYFTEAQIRELLES 388
+ PG A G L + P++I V +P+Y E + LL+S
Sbjct: 348 --------------IVPGGAEQEYQEGVLLNEVPDSPNKICVSNIPHYIPEEPVTMLLKS 393
Query: 389 FGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ 448
FG L+ F LVKD T S+G AFC Y D S T IA LNG+++GD+ L V RA+ G Q
Sbjct: 394 FGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHLKVVRASIGMTQ 453
Query: 449 PKPEQESV-LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
V + + Q L S+V+ L +V+ +EL D E+Y+EI +D+R
Sbjct: 454 AAGLDMGVNAMSMFAKTTSQDLET------SRVLQLLNMVTPEELMDPEDYDEICDDVRD 507
Query: 508 EGGKF 512
E K+
Sbjct: 508 ECSKY 512
>gi|83765203|dbj|BAE55346.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 563
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 173/357 (48%), Gaps = 44/357 (12%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALP-- 230
+ +R++ +D+ PP + A A + +PGA P M P+ Q F + P
Sbjct: 163 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGA-PRQQPMDPSRL-----QAFMSQPGA 216
Query: 231 -VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
++ +R A+R++V LP +A +++ +FF+ + G N D ++ +
Sbjct: 217 GTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFN--LQLNGLNVIHSVDPCISAQV 274
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAP-------------VKVRRPSDYNPSLAA 336
+ ++ FA +E ++ +A+ A+A DGI + + ++VRRP DY
Sbjct: 275 SDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQGLEVRRPKDY------ 328
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
P+ N G+ + P++I V +P+Y E + LL+SFG L+ F
Sbjct: 329 ----IVPSGNEQEYQEGVLLNEVP--DSPNKICVSNIPHYIPEEPVTMLLKSFGELKSFV 382
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESV 456
LVKD T S+G AFC Y D + T IA LNG+++GD+ L V RA+ G Q V
Sbjct: 383 LVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVVRASIGITQAAGLDMGV 442
Query: 457 -LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ + Q L S+V+ L +V+ +EL D+++Y+EI +D+R+E K+
Sbjct: 443 NAMSMFAKTTSQDLET------SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKY 493
>gi|71996490|ref|NP_001022970.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
gi|351018337|emb|CCD62281.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
Length = 471
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 140/313 (44%), Gaps = 97/313 (30%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVM------------------------------ 270
T +RR+YVG +P NE+++ FF+Q M
Sbjct: 154 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFR 213
Query: 271 ---------AAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 321
A G N F G
Sbjct: 214 SIDETTAGMAFDGIN----------------------------------------FMGQQ 233
Query: 322 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 381
+KVRRP DY PSQ ++N P S ++ ++IF+GGLP Y TE Q
Sbjct: 234 LKVRRPRDYQ--------PSQNTFDMN----SRMPVSTIVVDSANKIFIGGLPNYLTEDQ 281
Query: 382 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 441
++ELL SFGPL+ F L D + GNSKGYAF Y D ++TD A A LNG+++GDK L V+
Sbjct: 282 VKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQL 340
Query: 442 ANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEI 501
A ANQ + + L ++ IA L G ++++CL +V+ DELK D+EYEEI
Sbjct: 341 A--CANQQR--HNTNLPNSASAIAGIDLSQGAGRA-TEILCLMNMVTEDELKADDEYEEI 395
Query: 502 LEDMRQEGGKFAF 514
LED+R E K+
Sbjct: 396 LEDVRDECSKYGI 408
>gi|255082091|ref|XP_002508264.1| RNA binding protein [Micromonas sp. RCC299]
gi|226523540|gb|ACO69522.1| RNA binding protein [Micromonas sp. RCC299]
Length = 493
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 146/313 (46%), Gaps = 38/313 (12%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT-AGPGDAVVNVYINHEKK 294
A Q TR +RR+YVG LP N++++ FF+ M G G +VVN I HEK
Sbjct: 108 AAYAQHTRQSRRLYVGSLPKPVNDEALHAFFNNAMVNSGAAIDPSGGPSVVNTTITHEKG 167
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS---LAATLGPSQPNPNLNLAA 351
FAF+E R +E+A +A+ DGI+F G+ + ++RP DY+ + + A G + P + L
Sbjct: 168 FAFIEFRRLEDAESALMFDGIVFNGSKLIIKRPKDYDAARNPIWAMRGQAPPQDEVKLIG 227
Query: 352 VGLTPGS--AGGLE----------------------GPDRIFVGGLPYYFTEAQIRELLE 387
L G+ G E GP +++ GG T+ Q+R++L+
Sbjct: 228 EELPIGTIIVDGKEVKIPLPPPLPSEWPRLPRRTPNGPHKMYCGGFHPLHTDLQVRQVLQ 287
Query: 388 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN 447
S G L+ F ++ D E G G+AF Y+D ++ +A L GI++ ++ L RR N A
Sbjct: 288 SVGELKSFAVMPD-ENGRPTGHAFFEYKDPRLSAVAETVLTGIRVRNRRLVCRRMNPDAA 346
Query: 448 QPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQ 507
KP + + + L L+P S L ++ E D EI E +
Sbjct: 347 PEKPGESATYVVPDAAWPL----LEPAS-----ARLAVYMAIREEHDALARREIEEAVHA 397
Query: 508 EGGKFAFCSPTFC 520
E + A P F
Sbjct: 398 EAARLARWDPDFI 410
>gi|146170296|ref|XP_001470832.1| hypothetical protein TTHERM_00484731 [Tetrahymena thermophila]
gi|146145092|gb|EDK31651.1| hypothetical protein TTHERM_00484731 [Tetrahymena thermophila
SB210]
Length = 471
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 9/225 (4%)
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG-NTAGPG-DAVVN 286
+PV+ + Q RHARR+Y+G +P T N++ ++ + + + A GG + P + +V
Sbjct: 19 VPVIKLD--NQSGYRHARRLYIGNIPETINQEYLSEWLYRSLEAAGGLQPSLPSENPIVK 76
Query: 287 VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN--PSLAATLGPSQPN 344
I+ + +FAF E+RS+EE + + LDGII +++RRP++Y P + + P
Sbjct: 77 CEIDPKGRFAFTELRSIEETTALLQLDGIILWHRQLRIRRPTEYEKFPKVQGQFEANIPK 136
Query: 345 PNLNL-AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE--SFGPLRGFDLVKDR 401
N +L VG+ +GP++IF+ LP E I + L+ G ++ F LVKD
Sbjct: 137 LNFDLFKTVGIVIIPTIVDDGPNKIFLANLPTKMDELMILDELKLRDMGEIKAFHLVKDN 196
Query: 402 ETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 446
+T SKGYAF ++D S+TD L+G++ +TLT +R+ G
Sbjct: 197 QTNQSKGYAFFEFKDPSLTDNCIETLHGMQYAGRTLTCKRSQIGG 241
>gi|82540696|ref|XP_724646.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479360|gb|EAA16211.1| splicing factor-like protein, putative [Plasmodium yoelii yoelii]
Length = 714
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 48/315 (15%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA---GPGDA----VVNVYI-NH 291
+ + R++Y+G LPP + ++ + FF+ +++I ++ GD VV I N
Sbjct: 339 EGDKKQRKLYIGNLPPNSKQEEIVEFFNNTISSIIKGSSLEVKIGDVQLLPVVKCEIFNA 398
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
+ +F F+E R+++ + LD + + +++ RP DY P P + +P L +
Sbjct: 399 DSRFCFLEFRTMDITWLCLKLDSMSYNNYCLRINRPHDYMP-------PPEGDPALTVVF 451
Query: 352 VGLTPGSAGGLEGP------------DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
+ G + P +++++ LP+ + QI +LL FG L+GF+++K
Sbjct: 452 PDIDMGLLESFKPPKIAPVRSTGDDDNKLYIQNLPHDLKDDQIMDLLGQFGKLKGFNIIK 511
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRAN---------------- 443
D TG +KGY F Y+D S T +A ALNG G L V++A
Sbjct: 512 DLNTGLNKGYGFFEYEDSSCTQVAIHALNGFVCGKNILNVKKATFNKNSNNAPNSNNIAL 571
Query: 444 -QGANQPK---PEQESVLLHAQQQIALQ-RLMLQPGSVPSKVVCLTQVVSADELKDDEEY 498
+ P P S + + I LQ + + G S+V+ LT V ++L + +Y
Sbjct: 572 ANNVDVPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVIQLTNAVFQEDLIINSQY 631
Query: 499 EEILEDMRQEGGKFA 513
+EIL+D+++E K+
Sbjct: 632 DEILKDVKEEAEKYG 646
>gi|452841884|gb|EME43820.1| hypothetical protein DOTSEDRAFT_71600 [Dothistroma septosporum
NZE10]
Length = 433
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 24/287 (8%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A+ R ++R+ + +P +A E ++ FF+ + G N D ++ ++ +K +
Sbjct: 95 ALKPSTARQSKRLLIYNIPASATEDTIMDFFN--LQLNGLNVTRGADPCISAQLSQDKAY 152
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
A +E ++ E+A+NAMA DGI E + D N A L +P + T
Sbjct: 153 ALLEFKTPEDATNAMAFDGINMEPEAMVTSGNEDENGG-ARGLDIKRPKDYIVPVVTDGT 211
Query: 356 PGSAGGLEG--PD---RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
AG L PD +I + +P Y E Q ELL SFG L+ F LVKD T S+G A
Sbjct: 212 ENDAGVLSNVVPDTQNKISITNIPAYVDEEQTMELLNSFGELKNFVLVKDASTEESRGIA 271
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
FC Y+D + T +A +L+G+ +GD + VR A+ G Q ++++ +
Sbjct: 272 FCEYKDPNSTKVAVESLHGMTLGDAAMKVRLASIGIQQ-----------VSGEMSVNAMS 320
Query: 471 LQPGSVPS-----KVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
L G+ + +V+ L +++ +EL D +E +EILED+++E K+
Sbjct: 321 LMAGTARADGEGGRVLSLMNMITPEELMDPDEADEILEDVKEECAKY 367
>gi|408397958|gb|EKJ77095.1| hypothetical protein FPSE_02739 [Fusarium pseudograminearum CS3096]
Length = 554
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 39/355 (10%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q G +
Sbjct: 159 RQRRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGA-PRQQPMDPSKLQAFMNQPGGQVTSA 217
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
++A +R ++R+ V +PP +E ++ FF+ + G N D V +++
Sbjct: 218 GLKASN---SRQSKRLLVSRIPPGTSEDTLIAFFN--LQLNGLNVIDTTDPCVLCQFSND 272
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE------GAP-----VKVRRPSDYNPSLAATLGPS 341
+ FA +E + E + A+ALDGI E GA +++RRP DY + A
Sbjct: 273 RSFAVIEFKDAPETTVALALDGISMEANDASNGADGGHRGLEIRRPRDY--VVPAVTEDV 330
Query: 342 QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDR 401
+P + + P + +++ + +P + TE QI ELL SFG + F LVKDR
Sbjct: 331 AYDPEV---VSNVVPDTV------NKLSITNIPPFLTEEQIIELLASFGKPKAFVLVKDR 381
Query: 402 ETGNSKGYAFCVYQDLSVTD-IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
T S+G AF YQD +V++ A LNG+ +G K + V +A+ G Q V
Sbjct: 382 GTEESRGIAFAEYQDPAVSNPTALDTLNGMDIGGKQIKVSKASIGPTQ-------VANFD 434
Query: 461 QQQIALQRLMLQPGS--VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
A+ L Q + S+V+ L +V+A+EL D+++YEEI ED+R+E K+
Sbjct: 435 VGITAISGLASQTANEVESSRVLQLLNMVTAEELLDNDDYEEICEDVREECSKYG 489
>gi|46125343|ref|XP_387225.1| hypothetical protein FG07049.1 [Gibberella zeae PH-1]
Length = 564
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 39/355 (10%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q G +
Sbjct: 159 RQRRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGAPRQQP-MDPSKLQAFMNQPGGQVTSA 217
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
++A +R ++R+ V +PP +E ++ FF+ + G N D V +++
Sbjct: 218 SLKASN---SRQSKRLLVSRIPPGTSEDALIAFFN--LQLNGLNVIDTTDPCVLCQFSND 272
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE------GAP-----VKVRRPSDYNPSLAATLGPS 341
+ FA +E + E + A+ALDGI E GA +++RRP DY + A
Sbjct: 273 RSFAVIEFKDAPETTVALALDGISMEANDASNGADGGHRGLEIRRPRDY--VVPAVTEDV 330
Query: 342 QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDR 401
+P + + P + +++ + +P + TE QI ELL SFG + F LVKDR
Sbjct: 331 AYDPEV---VSNVVPDTV------NKLSITNIPPFLTEEQIIELLASFGKPKAFVLVKDR 381
Query: 402 ETGNSKGYAFCVYQDLSVTD-IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
T S+G AF YQD +V++ A LNG+ +G K + V +A+ G Q V
Sbjct: 382 GTEESRGIAFAEYQDPAVSNPTALDTLNGMDIGGKQIKVSKASIGPTQ-------VANFD 434
Query: 461 QQQIALQRLMLQPGS--VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
A+ L Q + S+V+ L +V+A+EL D+++YEEI ED+R+E K+
Sbjct: 435 VGITAISGLASQTANEVESSRVLQLLNMVTAEELLDNDDYEEICEDVREECSKYG 489
>gi|70946422|ref|XP_742927.1| U2 snRNP auxiliary factor [Plasmodium chabaudi chabaudi]
gi|56522174|emb|CAH84932.1| U2 snRNP auxiliary factor, putative [Plasmodium chabaudi chabaudi]
Length = 561
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 200/448 (44%), Gaps = 67/448 (14%)
Query: 108 DRHRERSRERSERRKDRDDDDHYRSRDYDR-RKDYDRDREDRHKRRSQSRSRGRSEHRSR 166
+RH +S++ + + D+ D S D R RK RD+ D S S + E++
Sbjct: 71 ERHHYKSKKSKKYKSSWDNSDKNYSDDSTRERKKNARDKNDI----SMSEEDSKKENKEI 126
Query: 167 SRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQF 226
R +SK + D + A+ ML + G + ++ G N+ P Q
Sbjct: 127 KPKRKKSKWDTV---DESLLANNMLIDSNNLS--GVLQYQRLSLNG---NLLPGNKMPQL 178
Query: 227 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTA---GPGDA 283
G P + + R++Y+G LPP + ++ + FF+ +++I ++ GD
Sbjct: 179 GRNP------YELEGDKKQRKLYIGNLPPNSKQEEIVEFFNNTLSSIIKGSSLEVKIGDV 232
Query: 284 ----VVNVYI-NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 338
VV I N + +F F+E R+++ ++ LD + + +++ RP DY P
Sbjct: 233 QLLPVVKCEIFNPDSRFCFLEFRTMDITWLSLKLDSMSYNNYCLRINRPHDYMP------ 286
Query: 339 GPSQPNPNLNLAAVGLTPGSAGGLEGP------------DRIFVGGLPYYFTEAQIRELL 386
P + +P L + + G + P +++++ LP+ + QI +LL
Sbjct: 287 -PPEGDPALTVVFPDIDMGLLESFKPPKIAPVRSTGDDDNKLYIQNLPHDLKDDQIMDLL 345
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRAN--- 443
FG L+GF+++KD TG +KGY F Y+D S T +A ALNG G L V++A
Sbjct: 346 GQFGKLKGFNIIKDLNTGLNKGYGFFEYEDSSCTQVAIHALNGFVCGKNILNVKKATFNK 405
Query: 444 --------------QGANQP---KPEQESVLLHAQQQIALQ-RLMLQPGSVPSKVVCLTQ 485
+ P P S + + I LQ + + G S+V+ LT
Sbjct: 406 NPNNIPNPNNIALANNVDVPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVIQLTN 465
Query: 486 VVSADELKDDEEYEEILEDMRQEGGKFA 513
V ++L + +YEEIL+D+++E K+
Sbjct: 466 AVFQEDLIINSQYEEILKDVKEEAEKYG 493
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 32/290 (11%)
Query: 236 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 295
A+ +R A+R++V P + + S+ FF+ + + N D ++V I+ ++ F
Sbjct: 12 ALKPSNSRQAKRLFVYNFPAASTDDSIQDFFNLQLNHL--NVISSSDPCISVQISKDRTF 69
Query: 296 AFVEMRSVEEASNAMALDGIIFEG------------APVKVRRPSDYNPSLAATLGPSQP 343
A E ++ E+ + A+ALDG E + +K+ RP DY + P+Q
Sbjct: 70 ALCEFKTPEDTTMALALDGQSMEAEDASNGASNGGHSGIKISRPKDY-------IVPAQS 122
Query: 344 NPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
+ V S +GP +I V +P Y TE Q+ +LL +FG L+ F LVKD T
Sbjct: 123 DDADYQEGVV----SNKVKDGPHKICVAQIPVYLTEEQVMDLLSAFGGLKAFTLVKDTGT 178
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQ 463
SKG AFC Y D TD A L+G+++ L V++A G Q + V +A
Sbjct: 179 DQSKGIAFCEYVDPDTTDPAVEGLDGMEIAQDHLKVKKACVGIQQASGLEMGV--NAMSM 236
Query: 464 IALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+A G V +V+ L +V+ +EL D +EYEEI ED+ +E K+
Sbjct: 237 LA----GTSSGDVEQGRVLMLLNMVTPEELMDPQEYEEIQEDVHEECSKY 282
>gi|342873171|gb|EGU75391.1| hypothetical protein FOXB_14096 [Fusarium oxysporum Fo5176]
Length = 661
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 41/356 (11%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q G +
Sbjct: 177 RKRRLTQWDIKPPGYENVTAEQAKLSGMFPLPGAPRQQP-MDPSKLQAFMNQPGGQVTSA 235
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
++A +R ++R+ V +P +E+++ +FF+ + G N D V +++
Sbjct: 236 GLKA---NNSRQSKRLLVSRIPSGTSEEALMSFFN--LQLNGLNVIDTTDPCVLCQFSND 290
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAP-----------VKVRRPSDYN-PSLAATLGP 340
+ FA +E + EA+ A+A+DGI E + +++RRP DY P++ +
Sbjct: 291 RSFAVIEFKDAPEATVALAMDGISMEASDASNGTDGGHRGLEIRRPRDYVVPAVTEEVSY 350
Query: 341 SQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
+ P + +++ + +P + TE QI ELL SFG + F LVKD
Sbjct: 351 DSE------VVSNIVPDTV------NKLSITNIPTFLTEEQIIELLASFGKPKAFVLVKD 398
Query: 401 RETGNSKGYAFCVYQDLSVTD-IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLH 459
R T S+G AF YQD + ++ A LNG+++G K L V +A+ G Q V
Sbjct: 399 RGTEESRGIAFAEYQDPAASNPTALDTLNGMEIGGKKLKVSKASIGPTQ-------VANF 451
Query: 460 AQQQIALQRLMLQPGS--VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
A+ L Q + S+V+ L +V+A+EL D+++YEEI ED+++E KF
Sbjct: 452 DVGITAISGLASQTANEVESSRVLQLLNMVTAEELLDNDDYEEICEDVKEECSKFG 507
>gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]
Length = 640
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 157/359 (43%), Gaps = 71/359 (19%)
Query: 205 GANPAIPGMFPNMFPLVTGQQFGA-LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVA 263
G NP I + +P ++ Q A + V A + AR +YVG LPP +
Sbjct: 236 GVNPTITQLMAQ-YPTMSLQDIIAKMQASNVTMAAAVAQKPARELYVGNLPPNVTGPQLQ 294
Query: 264 TFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVK 323
F S ++ +G T PG+ ++N +I+ + FAF EMRSVEE + A+ L+ + G P+K
Sbjct: 295 EFLSTIIQQVGLTTQ-PGNPIINTWISTDGHFAFCEMRSVEECNLALLLNQLSLLGQPLK 353
Query: 324 VRRPSDYN------PSLAA-------TLGPSQPNP---------NLNLAAVGLTPGSAGG 361
RP + P ++A LG PNP +L+ AA G +
Sbjct: 354 FGRPRSFMGPPQPMPQISARTQTALTNLG-CTPNPAWFAQPAVPSLDEAAAAPV-GDSST 411
Query: 362 LE--------------------------GPDRIFVGGLPYYFTEAQIRELLESFGPLRGF 395
L R+ + +P TE Q++EL+E FG L+ F
Sbjct: 412 LAGATAAAVAAAQPAVPAVASTTVDASLSAHRLIMSNIPVVLTEDQVKELVEPFGALKSF 471
Query: 396 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 455
LVKD TG S G A Y+D SVT A LNG+ +G L+V+ QP
Sbjct: 472 TLVKDTATGASMGSALFEYEDDSVTAQAVEGLNGLSIGGILLSVQ------CQP------ 519
Query: 456 VLLHAQQQIALQRLMLQPG--SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
A P PS V+ + +VS DEL+DD+EY ++ ED+ +E +F
Sbjct: 520 ----ASGAALPAAPGATPNFEDQPSAVLKMANMVSIDELRDDDEYADLAEDVEEECKRF 574
>gi|302916595|ref|XP_003052108.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
gi|256733047|gb|EEU46395.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 173/352 (49%), Gaps = 35/352 (9%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q G +
Sbjct: 156 RKRRLTQWDIKPPGYDNVTAEQAKLSGMFPLPGA-PRQQPMDPSKLQAFMNQPGGQVTSA 214
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
++A +R ++R+ V +P +E+++ +FF+ + G N D + +++
Sbjct: 215 GLKA---NNSRQSKRLLVSKIPSGTSEEALISFFN--LQLNGLNVIDATDPCILCQFSND 269
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFE-----GAP------VKVRRPSDYNPSLAATLGPS 341
+ FA +E R EA+ A+ALDG E GA +++RRP DY + A
Sbjct: 270 RSFAVLEFREASEATVALALDGTSMEPDDANGASNGESRGLEIRRPRDY--VVPAVTEEV 327
Query: 342 QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDR 401
NP++ + P + +++ + +P + E Q+ ELL +FG + F LVKDR
Sbjct: 328 SYNPDV---VSNIVPDTI------NKLCITNIPPFLAEDQVIELLAAFGKPKAFVLVKDR 378
Query: 402 ETGNSKGYAFCVYQDLSVTD-IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
T S+G AF YQD + + A LNG+ +G K L V +A+ G Q V + A
Sbjct: 379 GTEESRGIAFAEYQDPNAANPTALDTLNGMDVGGKKLKVTKASIGPTQVA--NFDVGITA 436
Query: 461 QQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+A Q G S+V+ L +V+A+EL D+++YEEI ED+++E KF
Sbjct: 437 ISGLASQTANDVEG---SRVLQLLNMVTAEELLDNDDYEEICEDVKEECSKF 485
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 212/462 (45%), Gaps = 58/462 (12%)
Query: 81 DREKSRDMDRE-----------------KSRDREKDREKDRHHRDRHRERSRERSERRKD 123
D +SR D + RDR DRE DR R+ R R +D
Sbjct: 85 DYRRSRRDDEDPYASSRSRRDREREDRYSGRDRRSDREWDRDRGRSRRDDDDRRDRRERD 144
Query: 124 RDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDM 183
DD R RDY+R +D R HK+R + + +R++ +D+
Sbjct: 145 LFDDRRRRDRDYERERDRRRSLTPPHKKREPTPDL-------TDVVPILERKRRMTQWDI 197
Query: 184 APPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQAT 242
PP + A A + +PGA P M P+ Q GA A+ +
Sbjct: 198 KPPGYDNVTAEQAKLSGMFPLPGA-PRQHAMDPSKLQAFMSQGGGANSA----ALKPTNS 252
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R A+R+ V LPP+A E+S+ FF+ + G N D + +I ++ FA +E R+
Sbjct: 253 RQAKRLVVRNLPPSATEESLVNFFN--LQLNGLNVIETTDPCLQAHIAPDRSFAMLEFRN 310
Query: 303 VEEASNAMALDGIIFEG------------APVKVRRPSDYNPSLAATLGPSQPNPNLNLA 350
EA+ A+A DGI + +++ RP DY + A + +P+ ++
Sbjct: 311 SSEATVALAFDGISMDADDAGANGAEAVHGGLQITRPKDY--IVPAVVEDPNYDPDSDVP 368
Query: 351 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 410
S+ ++ P++I V +P Y E Q+ ELL SFG L+ F LVKD T S+G A
Sbjct: 369 -------SSVVIDSPNKISVANIPPYLNEDQVMELLVSFGKLKSFVLVKDNGTQESRGIA 421
Query: 411 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLM 470
F Y D SV+++A LN + +G++ L V++A+ G Q E ++A +A
Sbjct: 422 FLEYVDPSVSNVAIQGLNDMPLGEQKLKVKKASIGITQVAGEMS---VNAMSMLAGTTST 478
Query: 471 LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
S S+V+ L +V+ +EL D+++YEEI ED+ +E KF
Sbjct: 479 HAEAS--SRVLQLLNMVTPEELMDNDDYEEIREDVLEECKKF 518
>gi|167395950|ref|XP_001741817.1| hexokinase [Entamoeba dispar SAW760]
gi|165893477|gb|EDR21726.1| hexokinase, putative [Entamoeba dispar SAW760]
Length = 974
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 180/408 (44%), Gaps = 86/408 (21%)
Query: 130 YRSRDYDRRKDYDR--DREDRHKRRSQSRSRGRSEHRSRSRSRSRS--KSKRISGFDMAP 185
YRS R++Y R DREDRH+R ++ R+ R RS S S K S +D P
Sbjct: 280 YRSNRRKTRREYSRSEDREDRHRRVAEEEHYNRNIRRRADRSPSLSPLGDKLHSRWDEQP 339
Query: 186 PASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHA 245
A + QI Q + R A
Sbjct: 340 KA----------IDSVQIS------------------------------QQLNVHQERAA 359
Query: 246 RRVYVGGLPPTANEQSVATFFSQVM---AAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+R+YVG + + +E+ + F++ M + N P D + ++ +N+E+ +AF+E R+
Sbjct: 360 KRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKN--DPRDIITHIEVNYERSYAFLEFRT 417
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
+EEA A++LDG+ +GA VKVRRP DYNP L G SQ + PG+
Sbjct: 418 LEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQL----------MEPGTTNPR 467
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV--YQDLSVT 420
E +++G +P T+ QIR+ LE+ PL+ F +++D + G +G +C+ YQ+
Sbjct: 468 ESI--LYMGNIPLQMTDEQIRKKLENLNPLKKFFVIRDPDLGAPQGKCYCLFEYQNPEYK 525
Query: 421 DIACAALNGIKMGDKTLTVRRANQGANQ-PKP---EQESVLLHAQQQIALQRLM------ 470
+ +GI +G + V G PK E S + + + L+
Sbjct: 526 E-KILTFDGINLGGNKIEVCSGVDGFKHLPKASLNELFSKMFPHTTDLVIGTLLNSSVGY 584
Query: 471 -------LQPGSV-----PSKVVCLTQVVSADELKDDEEYEEILEDMR 506
L+P S+++ + +V ++L D + Y E+++D+R
Sbjct: 585 STVFEKILKPSEKIEDQHVSRIIVIFNMVYPEDLIDQQRYIELIDDIR 632
>gi|407043289|gb|EKE41863.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
nuttalli P19]
Length = 628
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 45/312 (14%)
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA---VVNVYINH 291
Q + R A+R+YVG + + +E+ + F++ M G+ D + ++ +N+
Sbjct: 131 QQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRR--GDYVDKNDTRDIITHIEVNY 188
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
E+ +AF+E R++EEA A++LDG+ +GA VKVRRP DYNP L G SQ
Sbjct: 189 ERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQ--------- 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
+ PG+ E +++G +P T+ QIR+ LE+ PL+ F +++D + G +G +
Sbjct: 240 -LMEPGTTNPRESI--LYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGAPQGKCY 296
Query: 412 CV--YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ-PKP---EQESVLLHAQQQIA 465
C+ YQ+ + +GI +G + V G PK E S + +
Sbjct: 297 CLFEYQNPEYKE-KILTFDGINLGGNKIEVCSGVDGFKHLPKASLNELFSKMFPHTTDLV 355
Query: 466 LQRLM-------------LQPGSV-----PSKVVCLTQVVSADELKDDEEYEEILEDMR- 506
+ L+ L+P S+++ + +V ++L D + Y E+++D+R
Sbjct: 356 IGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLTDQQRYIELIDDIRF 415
Query: 507 --QEGGKFAFCS 516
QE G+ S
Sbjct: 416 VCQEYGEVESIS 427
>gi|347968829|ref|XP_003436304.1| AGAP002908-PC [Anopheles gambiae str. PEST]
gi|333467822|gb|EGK96709.1| AGAP002908-PC [Anopheles gambiae str. PEST]
Length = 250
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 4/132 (3%)
Query: 381 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 440
Q++ELL SFG L+ F+LVKD TG KGYAF Y + +VTD A A LNG+++GDK L V+
Sbjct: 58 QVKELLLSFGQLKAFNLVKDAATGLGKGYAFAEYVEYTVTDQAIAGLNGMQLGDKKLIVQ 117
Query: 441 RANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEE 500
RA+ GA K +V+ Q Q+ L+ G P++V+CL +V+ DELKD+EEYE+
Sbjct: 118 RASVGA---KNSNAAVVAPVQIQVPGLSLVGSSGP-PTEVLCLLNMVTPDELKDEEEYED 173
Query: 501 ILEDMRQEGGKF 512
ILED+R+E K+
Sbjct: 174 ILEDIREECNKY 185
>gi|84996015|ref|XP_952729.1| splicing factor [Theileria annulata strain Ankara]
gi|65303726|emb|CAI76103.1| splicing factor, putative [Theileria annulata]
Length = 380
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 52/295 (17%)
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFS-QVMAAIGGNTAGPGDAVVN---VYINHEKK 294
++A + +R+YVG LP Q V FF+ +MA + GNT P D +V +Y N ++
Sbjct: 49 EEARKRQKRLYVGNLPSGTKLQDVVDFFNGALMAMVPGNTMDPRDPLVTKTEIY-NPDQG 107
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
+ F+E ++ E A LDGI G +K+RRP D+N LG + +
Sbjct: 108 YCFLEFKTPELADLGFKLDGITCNGYSLKIRRPLDFN------LGANSDDT--------- 152
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
++FV +P TE +++ LLE G L+ +L+KD TG SKGY F +
Sbjct: 153 ------------KVFVQNIPLDVTEDEMKALLEKHGKLKMANLLKDPATGVSKGYGFFEF 200
Query: 415 QDLSVTDIACAALNGIKMGDKTLTVRRANQG-------------ANQPKPEQESVLLHAQ 461
+D + +A LNG +G L+V+ A G +N P +S+L +
Sbjct: 201 EDARSSKLAVLHLNGSVLGKNVLSVKHAAFGYFASGGKPIDCKASNLPNSITQSILSNPL 260
Query: 462 QQIALQ---RLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+ LQ R+ GS PSKV+ L +V ++L D Y EI+ +++E K+
Sbjct: 261 LGLQLQNGRRI----GSNPSKVIQLLNMVFHEDLISDYNYNEIVRLVKEEAQKYG 311
>gi|393909510|gb|EJD75480.1| hypothetical protein LOAG_17389 [Loa loa]
Length = 502
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 152/355 (42%), Gaps = 119/355 (33%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP N + P + P VT Q +RR+YVG +P +
Sbjct: 165 AAGQIPRNN--VQSAVPVVGPSVTCQ--------------------SRRLYVGNIPFGCS 202
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E ++ FF+Q M G A PG+ V+ +N +K FAF+E RS++E + MA DGI F
Sbjct: 203 EDAMLDFFNQQMHLCGLAQA-PGNPVLACQMNLDKNFAFIEFRSIDETTAGMAFDGINFM 261
Query: 319 GAPVKVRRPSDYNPS---------LAATLGPSQPN-------PN---------------- 346
G +K+RRP DY P + + + P P+ P+
Sbjct: 262 GQQLKIRRPRDYQPMSTSYDLGNMMVSNIVPDSPHKIFIGGLPSYLNAEQVKELLSSFGQ 321
Query: 347 ---LNLA---AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
NL + G++ G
Sbjct: 322 LKAFNLVTEQSTGVSKG------------------------------------------- 338
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA 460
YAF Y D S+TD A A LNG+++GDK L V+ + A + +V +
Sbjct: 339 --------YAFAEYLDPSLTDQAIAGLNGMQLGDKNLVVQLSCANA------RNNVAQNT 384
Query: 461 QQQIALQRLMLQPGS-VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFAF 514
QI + + L G+ P++V+CL +V+ DELKDDEEYE+ILED+R+E K+
Sbjct: 385 FPQIQVAGIDLSHGAGPPTEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGI 439
>gi|449707077|gb|EMD46798.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 712
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 45/312 (14%)
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA---VVNVYINH 291
Q + R A+R+YVG + + +E+ + F++ M G+ D + ++ +N+
Sbjct: 131 QQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRR--GDYVDKNDTRDIITHIEVNY 188
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
E+ +AF+E R++EEA A++LDG+ +GA VKVRRP DYNP L G SQ
Sbjct: 189 ERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQ--------- 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
+ PG+ E +++G +P T+ QIR+ LE+ PL+ F +++D + G +G +
Sbjct: 240 -LMEPGTTNPRESI--LYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGAPQGKCY 296
Query: 412 CV--YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ-PKP---EQESVLLHAQQQIA 465
C+ YQ+ + +GI +G + V G PK E S + +
Sbjct: 297 CLFEYQNPEYKE-KILTFDGINLGGNKIEVCSGVDGFKHLPKASLNELFSKMFPHTTDLV 355
Query: 466 LQRLM-------------LQPGSV-----PSKVVCLTQVVSADELKDDEEYEEILEDMR- 506
+ L+ L+P S+++ + +V ++L D + Y E+++D+R
Sbjct: 356 IGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLTDQQRYIELIDDIRF 415
Query: 507 --QEGGKFAFCS 516
QE G+ S
Sbjct: 416 VCQEYGEVESIS 427
>gi|67475980|ref|XP_653619.1| U2 snRNP auxiliary factor large subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56470591|gb|EAL48233.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 712
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 45/312 (14%)
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA---VVNVYINH 291
Q + R A+R+YVG + + +E+ + F++ M G+ D + ++ +N+
Sbjct: 131 QQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRR--GDYVDKNDTRDIITHIEVNY 188
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
E+ +AF+E R++EEA A++LDG+ +GA VKVRRP DYNP L G SQ
Sbjct: 189 ERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQ--------- 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
+ PG+ E +++G +P T+ QIR+ LE+ PL+ F +++D + G +G +
Sbjct: 240 -LMEPGTTNPRESI--LYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGAPQGKCY 296
Query: 412 CV--YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ-PKP---EQESVLLHAQQQIA 465
C+ YQ+ + +GI +G + V G PK E S + +
Sbjct: 297 CLFEYQNPEYKE-KILTFDGINLGGNKIEVCSGVDGFKHLPKASLNELFSKMFPHTTDLV 355
Query: 466 LQRLM-------------LQPGSV-----PSKVVCLTQVVSADELKDDEEYEEILEDMR- 506
+ L+ L+P S+++ + +V ++L D + Y E+++D+R
Sbjct: 356 IGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLTDQQRYIELIDDIRF 415
Query: 507 --QEGGKFAFCS 516
QE G+ S
Sbjct: 416 VCQEYGEVESIS 427
>gi|378731414|gb|EHY57873.1| U2AF domain-containing protein (UHM) kinase 1 [Exophiala
dermatitidis NIH/UT8656]
Length = 574
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 171/366 (46%), Gaps = 57/366 (15%)
Query: 174 KSKRISGFDMAPPA-SAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP + A A + +PGA P M P+ Q F LP
Sbjct: 174 RKRRLTQWDIKPPGYENVTAEQAKMSGMFPLPGA-PRQQQMDPSRL-----QAFMNLPSS 227
Query: 233 PVQ--AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 290
A+ +R ARR++V LP + +E+++ FF+ + G N D I
Sbjct: 228 SSNNTALKPSNSRQARRLFVHNLPASVSEEALVQFFN--LQLNGLNVTKAVDPCAQANIA 285
Query: 291 HEKKFAFVEMRSVEEASNAMALDGIIF-----------------EGAP--VKVRRPSDYN 331
++ FA VE ++ +A+ A+ALDGI AP +++RRP DY
Sbjct: 286 EDRSFALVEFKNASDATLALALDGITMPEHHSEMNGNGDANGNGTAAPKGLEIRRPKDYI 345
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 391
P+ + A S+ + +++ V LP + T+ Q+ ELL++FG
Sbjct: 346 ------------VPSADEATYAEGEISSEVPDTANKLAVTNLPPFLTDDQVIELLKAFGE 393
Query: 392 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKP 451
++ F LV++ ++ S+G AFC Y D + T +A LNG+ + ++ V RA+ G Q
Sbjct: 394 VKAFVLVREPDSQESRGIAFCEYADPASTAVAIEGLNGMDLAGNSIKVTRASIGYQQ--- 450
Query: 452 EQESVLLHAQQQIALQRLMLQPGSVP-----SKVVCLTQVVSADELKDDEEYEEILEDMR 506
A + + + + G+ +V+ L +V+ ++L D+++YEEI ED+
Sbjct: 451 -------AAGLDMGVNAMSMFAGTTSDAHDEGRVLQLLNMVTPEDLMDNDDYEEICEDVM 503
Query: 507 QEGGKF 512
+E K+
Sbjct: 504 EECSKY 509
>gi|432095994|gb|ELK26905.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 171
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 110/212 (51%), Gaps = 50/212 (23%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAG+IP A +P P+ A+ MPV TR ARR+ VG +P
Sbjct: 8 AAGRIP-ATALLPARTPDGL---------AVTPMPVPVAVSNMTRQARRLCVGNIPFGIT 57
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E+++ +N +K FAF+E RSV+E + AMALDGIIF+
Sbjct: 58 EEAM--------------------------VNRDKNFAFLEFRSVDETTQAMALDGIIFQ 91
Query: 319 GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV--GLTPGSAGGLEGPDRIFVGGLPYY 376
G +K+RRP DY P L NP++ L V + P SA ++F+GGLPYY
Sbjct: 92 GQSLKIRRPHDYQP-----LPDMSENPSVYLPGVVSTVVPDSA------HKLFMGGLPYY 140
Query: 377 FTEAQIRELLESFGPLRGFDLVKDRETGNSKG 408
+ Q++ELL SFGPL+ F+LVKD TG S+G
Sbjct: 141 LKD-QVKELLTSFGPLKAFNLVKDGATGLSRG 171
>gi|330931856|ref|XP_003303563.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
gi|311320368|gb|EFQ88342.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
Length = 578
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 34/283 (12%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ ++R+YV LP Q + FF+ + + N D ++ +I K++A +E ++
Sbjct: 254 KQSKRLYVHNLPSGCTSQEIMEFFNNQLNGL--NVVSGNDPCLSAHIATSKEYAALEFKA 311
Query: 303 VEEASNAMALDGIIFE---GAP----VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
E+A+ A+A++GI GAP + +RRP DY + T + P +++V
Sbjct: 312 PEDATLALAMNGISMRDEGGAPDRSGLSIRRPKDY---ITPTADENAYPPGDEVSSVVK- 367
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
+ P+++ + +P Y E QIREL+E+ G L+ F LVKD T +G AFC Y
Sbjct: 368 -------DSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTGTDQHRGIAFCEYA 420
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS 475
D + D LN I +GD L V RA G +Q + L I+ ML S
Sbjct: 421 DNEIIDAVIEGLNDIPLGDGNLKVSRATVGL-----QQSTGLDGGVGAIS----MLAGAS 471
Query: 476 VP-----SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
S+VVCL +V++DEL +D+EYEEI ED+ +E GK+
Sbjct: 472 AAENHEHSRVVCLMNMVTSDELLNDDEYEEIKEDIEEECGKYG 514
>gi|218192051|gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
Length = 1128
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 184/421 (43%), Gaps = 66/421 (15%)
Query: 130 YRSRDYDRRKDYDRDREDRHK---------RRSQSRSRGRSEHRSRSRSRS--------- 171
Y S D RRK ++ DR RR +SR G S + ++ +
Sbjct: 500 YHSMDKSRRKHFETDRHRTSWNDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIKTAS 559
Query: 172 ---RSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMF------PN--MFPL 220
RS K+ + +D P A+ + + + + +P F PN + +
Sbjct: 560 LVIRSPEKKSATWDQLPVATDL--SNFVTTLQSTVGLKDSTVPVNFTTSKQDPNTTIGTI 617
Query: 221 VTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ-VMAAIGGNTAG 279
+TG L V VQ QATR RR+++ LP A E + ++ ++++ +
Sbjct: 618 LTGSN---LAVDSVQLT--QATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 672
Query: 280 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 339
++ IN +K+ AFVE + E+A+ A++ DG F G+ +K+RRP +Y A +
Sbjct: 673 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVE--MAHVA 730
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
P +P+ + L + + + P +IF+ G+ + + E++ SFGPL + +
Sbjct: 731 PKKPSEEIKLISDVVA-------DSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLF 783
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV-----RRANQGANQPKPEQE 454
+ + G + AF Y D S+T ACA LNG+K+G LT Q N+ P
Sbjct: 784 NEDLGGA--CAFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASP--- 838
Query: 455 SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADE--LKDDEEYEEILEDMRQEGGKF 512
+ A L P+KV+ L V +E L E EEILED+R E +F
Sbjct: 839 ---FYGIPDSAKSLL-----EEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARF 890
Query: 513 A 513
Sbjct: 891 G 891
>gi|108706080|gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 183/421 (43%), Gaps = 66/421 (15%)
Query: 130 YRSRDYDRRKDYDRDREDRHK---------RRSQSRSRGRSEHRSRSRSRS--------- 171
Y S D RRK ++ DR RR +SR G S + ++ +
Sbjct: 336 YHSMDKSRRKHFETDRHRTSWNDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIKTAS 395
Query: 172 ---RSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMF------PN--MFPL 220
RS K+ + +D P A+ + + + + +P F PN + +
Sbjct: 396 LVIRSPEKKSATWDQLPVATDL--SNFVTTLQSTVGLKDSTVPVNFTTSKQDPNTTIGTI 453
Query: 221 VTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ-VMAAIGGNTAG 279
+TG L V VQ QATR RR+++ LP A E + ++ ++++ +
Sbjct: 454 LTGSN---LAVDSVQLT--QATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 508
Query: 280 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 339
++ IN +K+ AFVE + E+A+ A++ DG F G+ +K+RRP +Y A +
Sbjct: 509 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVE--MAHVA 566
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
P +P+ + L + + + P +IF+ G+ + + E++ SFGPL + +
Sbjct: 567 PKKPSEEIKLISDVVA-------DSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLF 619
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV-----RRANQGANQPKPEQE 454
+ G + AF Y D S+T ACA LNG+K+G LT Q N+ P
Sbjct: 620 NEYLGGA--CAFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASP--- 674
Query: 455 SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADE--LKDDEEYEEILEDMRQEGGKF 512
+ A L P+KV+ L V +E L E EEILED+R E +F
Sbjct: 675 ---FYGIPDSAKSLL-----EEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARF 726
Query: 513 A 513
Sbjct: 727 G 727
>gi|242803779|ref|XP_002484243.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
gi|218717588|gb|EED17009.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
Length = 543
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 231/507 (45%), Gaps = 45/507 (8%)
Query: 20 NNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKD 79
N Y S RS DH + + E RSR +G R+ + D +
Sbjct: 2 NGDAYSSRDSGRSR-DHYRDERRDRGERDRGERRRSRSPHHGRGSRREAEADSYSSSRDY 60
Query: 80 RDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRK 139
R RE+ DR SR E RE DR DR R ER RR+ D D + R +
Sbjct: 61 RARERE---DRYSSRRDE--REWDRDRGDRRRREHDERPPRRERGDRGDLFED----RPR 111
Query: 140 DYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR-ISGFDMAPPA-SAMLAAGAGA 197
+R+ DR +RRS + + R + S + KR ++ +D+ PP + A A
Sbjct: 112 RREREGRDRERRRSATPPKKREPTPDLTNVVSVLERKRRLTQWDIKPPGYDNVTAEQAKL 171
Query: 198 AAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTA 257
+ +PGA P + P+ + Q A A+ +R A+R++ LPP
Sbjct: 172 SGMFPLPGA-PRQQAVDPSRLQALVNQP--AAGTTENSALRPANSRQAKRLFAHNLPPNV 228
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
E ++ +FF+ + G N D V+ I+ + FA +E + E + A+ALDGI
Sbjct: 229 TEAALVSFFN--LQLNGLNVIEGIDPCVSAQISKDHSFALLEFKGANETTVALALDGITM 286
Query: 318 E----------GA-PVKVRRPSDY-NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGP 365
E GA +++RRP DY PS+ P P+ P S P
Sbjct: 287 EEHESAATANGGARGLELRRPKDYIVPSV-----PEDQQPHQESVISNHVPDS------P 335
Query: 366 DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 425
+++ + +P Y E + LL+S G L+ F LVKD T S+G AFC Y D + T IA
Sbjct: 336 NKLCITNIPLYIPEEPVTMLLKSIGELKAFVLVKDSGTDESRGIAFCEYVDAASTAIAVE 395
Query: 426 ALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQ 485
+LNG+++GDK L + A+ GA Q + L +++ S+++ L
Sbjct: 396 SLNGMELGDKHLKITHASIGAT-----QAAGLDMGVNAMSMFAKTTSADLETSRILQLLN 450
Query: 486 VVSADELKDDEEYEEILEDMRQEGGKF 512
+V+ADEL ++++YEEILED++ E K+
Sbjct: 451 MVTADELINNDDYEEILEDVQDECSKY 477
>gi|358391563|gb|EHK40967.1| hypothetical protein TRIATDRAFT_135674 [Trichoderma atroviride IMI
206040]
Length = 558
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 169/361 (46%), Gaps = 52/361 (14%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP ++ A A + +PGA P M P Q G +
Sbjct: 162 RKRRLTQWDIKPPGYDLVTAEQAKLSGMFPLPGA-PRQQPMDPTKLQAFITQPGGQVTSA 220
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
++A +R A+R+ V +P A E ++ +FF+ + G N D V + +
Sbjct: 221 GLKASN---SRQAKRLLVSNVPSGAGEDALISFFN--LQLNGLNVIESSDPCVLCQFSAD 275
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEG------------APVKVRRPSDY-NPSLAATLG 339
+ FA +E R+ +A+ A+ALDGI E + + +RRP DY P+L +
Sbjct: 276 RAFAVLEFRNASDATVALALDGISMEADDAMNGTADGVSSGLNIRRPKDYVMPALPDEM- 334
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPD---RIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
P P N+ PD ++ + +P + TE Q+ ELL +FG + F
Sbjct: 335 PFDPEVISNVV--------------PDTVHKLCITNIPSFLTEEQVIELLAAFGKPKAFV 380
Query: 397 LVKDRETGNSKGYAFCVY-QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 455
LVKD+ T S+G AF Y + S + A +LNG+ +G K L V +A+ G Q
Sbjct: 381 LVKDQSTEESRGIAFTEYLEPSSANEPALNSLNGMDVGGKKLKVTKASIGPTQVANFDVG 440
Query: 456 VL----LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
+ L +Q ++R S V+ L +V+ +EL D+++YEEI ED++ E K
Sbjct: 441 ITAISGLASQTSNDIER---------SSVIQLLNMVTPEELIDNDDYEEICEDVQDECAK 491
Query: 512 F 512
F
Sbjct: 492 F 492
>gi|358417046|ref|XP_001256277.3| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Bos taurus]
Length = 330
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 157 SRG-RSEHRSRSRSRSRSKSKRI-SGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPG 212
+RG + EH RS K K++ +D+ PP + A AAGQIP A +P
Sbjct: 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIP-ATALLPT 124
Query: 213 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
M P+ A+ PV + Q TR ARR+YVG +P E+++ FF+ M
Sbjct: 125 MTPDGL---------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR- 174
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
+GG T PG+ V+ V IN +K FAF+E RSV+E + AMA DGIIF+G +K+RRP DY P
Sbjct: 175 LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
Query: 333 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
+ PS P L G GS G G
Sbjct: 235 LPGMSENPSVYVP--GLCRPGQCLGSKGSCRG 264
>gi|322693990|gb|EFY85833.1| splicing factor, putative [Metarhizium acridum CQMa 102]
Length = 584
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 202/456 (44%), Gaps = 75/456 (16%)
Query: 102 KDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYD-RDREDRHKRRSQSRSRGR 160
+DR DR+ R R R ER DRD R D + RDRE RR R R
Sbjct: 84 RDREREDRYSGRDR-RGERDWDRDRGSSRRDARRDEDDRPNRRDREGFDDRRRGGRGGDR 142
Query: 161 SEHRSRSRSRSR----------------------SKSKRISGFDMAPPASAMLAAGAGAA 198
+ +R SR + +R++ +D+ PP ++ A A
Sbjct: 143 RDDGGFARQESRRSPSPAKPREPTPDLTDIIPVLERKRRMTQWDIKPPGYELVTA-EQAK 201
Query: 199 AAGQIPGANPAIPGMFPNMFPL--VTGQQFGALPVMPVQAMTQQA--TRHARRVYVGGLP 254
+G P +PG P P+ Q F P V + +A +R A+R+ V +P
Sbjct: 202 LSGMFP-----LPGA-PRQQPMDPTKLQAFMKEPNGGVSSAGLKASNSRQAKRLIVSNIP 255
Query: 255 PTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG 314
+E+S+ +FF+ + G N D + ++ FA +E R+ +A+ A+ALDG
Sbjct: 256 QGNSEESLISFFN--LQLNGLNVIESSDPCNLCQFSTDRSFAVLEFRNAGDATVALALDG 313
Query: 315 IIFEG-----------APVKVRRPSDYNPSLAATLGPSQP-----NPNLNLAAVGLTPGS 358
I E + +RRP DY + P+ P +PN+ + P +
Sbjct: 314 INMEADDTMNGDGGEKQGLSIRRPKDY-------VMPAIPEEMAYDPNV---VSNVVPDT 363
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL- 417
++ + +P + TE QI ELL +FG + F LVKDR T S+G AF Y +
Sbjct: 364 V------HKLSITNIPTFLTEDQIIELLAAFGKPKAFVLVKDRSTEESRGIAFAEYLEPG 417
Query: 418 SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVP 477
S + A +ALNG+ +G K L V +A+ G Q V + A +A Q +
Sbjct: 418 SANEPALSALNGMDVGGKKLKVAKASIGPTQVA--NFDVGITAISGLASQ---TSTDAEK 472
Query: 478 SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
+V+ L +V+ +EL D EEYEEI ED+R+E KF
Sbjct: 473 GRVLQLLNMVTPEELMDTEEYEEICEDVREECSKFG 508
>gi|440290938|gb|ELP84237.1| splicing factor u2af large subunit, putative [Entamoeba invadens
IP1]
Length = 623
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 120/242 (49%), Gaps = 26/242 (10%)
Query: 215 PNMFPL--VTGQQFGALPVMPVQAMTQQATRH----ARRVYVGGLPPTANEQSVATFFSQ 268
P++ PL ++ PV + QQ H +RRVYVG + T EQ + F+
Sbjct: 87 PSLSPLGKKIKSRWDEQPVADASLLQQQLNVHQEKGSRRVYVGNINTTTTEQDIVEAFND 146
Query: 269 VM---AAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR 325
M + N D +V+ +N+EK +AF+E R+ ++A A++LDG+ +GA VKVR
Sbjct: 147 AMRRGDYVDKNDKS--DIIVSTEVNYEKSYAFIEFRTFDQAVKALSLDGLTIKGASVKVR 204
Query: 326 RPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIREL 385
RP D+NP L SQ L VG T G + ++G +P ++ QI++
Sbjct: 205 RPKDFNPVLPFISSLSQ------LMEVGTTKPRDGVM------YMGNIPLQMSDEQIQKK 252
Query: 386 LESFGPLRGFDLVKDRETGNSKGYAFCV--YQDLSVTDIACAALNGIKMGDKTLTVRRAN 443
LE+ PL+ + +V+D G +G +C+ YQ+ D A NGI +G + V
Sbjct: 253 LENLNPLKKYVVVRDPSLGAPQGKCYCLFEYQNPEYKD-KVLAFNGIILGGDKIEVCSGL 311
Query: 444 QG 445
+G
Sbjct: 312 EG 313
>gi|389585165|dbj|GAB67896.1| U2 snRNP auxiliary factor [Plasmodium cynomolgi strain B]
Length = 894
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 122/253 (48%), Gaps = 29/253 (11%)
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY------NPSLAATLGPSQ 342
N E +F F+E RS+E + LD I F +++ RP D+ +P+L
Sbjct: 575 FNVESRFCFLEFRSLEITWLCLRLDAISFNNYCLRIARPHDFVPPPGGDPALTVVFTDIN 634
Query: 343 PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRE 402
+ V + P + G + +++++ LP+ + QIR+LL+ FG L+GF+++KD
Sbjct: 635 HEVFEMVKPVKIAPVRSTG-DDDNKLYIQNLPHDLRDDQIRDLLQQFGKLKGFNVIKDLN 693
Query: 403 TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQ 462
TG +KGY F Y+D + T IA ALNG G L V++A G +Q + + A
Sbjct: 694 TGLNKGYGFFEYEDSNCTPIAMHALNGFVCGQNILNVKKATFGKSQNSTQNANTTSLATG 753
Query: 463 QIALQRLML----------------------QPGSVPSKVVCLTQVVSADELKDDEEYEE 500
+ L +L + G S+VV LT V ++L D +YEE
Sbjct: 754 SVDLPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDLLIDSQYEE 813
Query: 501 ILEDMRQEGGKFA 513
IL+D+++E K+
Sbjct: 814 ILKDIKEEAEKYG 826
>gi|358378060|gb|EHK15743.1| hypothetical protein TRIVIDRAFT_79964 [Trichoderma virens Gv29-8]
Length = 503
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 167/361 (46%), Gaps = 52/361 (14%)
Query: 174 KSKRISGFDMAPPASAMLAA-GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVM 232
+ +R++ +D+ PP ++ A A + +PGA P M P Q G +
Sbjct: 107 RKRRLTQWDIKPPGYDLVTAEQAKLSGMFPLPGA-PRQQPMDPTKLQAFMTQPGGQVTSA 165
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
++A +R A+R+ V +P + + ++ +FF+ + G N D V + +
Sbjct: 166 GLKASN---SRQAKRLLVSNVPSSVTDDALISFFN--LQLNGLNVIDSSDPCVLSQFSQD 220
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVK------------VRRPSDY-NPSLAATLG 339
K FA +E R+ +A+ A+ALDGI E + +RRP DY P+L +
Sbjct: 221 KAFAVLEFRNASDATVALALDGITMEADDAQNGTANGGNHGLVIRRPKDYVMPALPDEM- 279
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPD---RIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
P P N+ PD ++ + +P + E Q+ ELL +FG + F
Sbjct: 280 PYDPEVISNVV--------------PDTVHKLCITNIPSFLNEDQVIELLAAFGKPKAFV 325
Query: 397 LVKDRETGNSKGYAFCVYQDLSVT-DIACAALNGIKMGDKTLTVRRANQGANQPKPEQES 455
LVKDR T S+G AF Y + S + A +LNG+ +G K L V +A+ G Q
Sbjct: 326 LVKDRSTEESRGIAFTEYLEPSTANEPALNSLNGMDVGGKKLKVTKASIGPTQVANFDVG 385
Query: 456 VL----LHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
+ L +Q ++R S V+ L +V+ +EL D+++YEEI ED++ E K
Sbjct: 386 ITAISGLASQTSNDIER---------SSVIQLLNMVTPEELMDNDDYEEICEDVQDECSK 436
Query: 512 F 512
F
Sbjct: 437 F 437
>gi|108706079|gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 183/421 (43%), Gaps = 66/421 (15%)
Query: 130 YRSRDYDRRKDYDRDREDRHK---------RRSQSRSRGRSEHRSRSRSRS--------- 171
Y S D RRK ++ DR RR +SR G S + ++ +
Sbjct: 336 YHSMDKSRRKHFETDRHRTSWNDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIKTAS 395
Query: 172 ---RSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMF------PN--MFPL 220
RS K+ + +D P A+ + + + + +P F PN + +
Sbjct: 396 LVIRSPEKKSATWDQLPVATDL--SNFVTTLQSTVGLKDSTVPVNFTTSKQDPNTTIGTI 453
Query: 221 VTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ-VMAAIGGNTAG 279
+TG L V VQ QATR RR+++ LP A E + ++ ++++ +
Sbjct: 454 LTGSN---LAVDSVQLT--QATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 508
Query: 280 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 339
++ IN +K+ AFVE + E+A+ A++ DG F G+ +K+RRP +Y A +
Sbjct: 509 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVE--MAHVA 566
Query: 340 PSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK 399
P +P+ + L + + + P +IF+ G+ + + E++ SFGPL + +
Sbjct: 567 PKKPSEEIKLISDVVA-------DSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLF 619
Query: 400 DRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV-----RRANQGANQPKPEQE 454
+ G + AF Y D S+T ACA LNG+K+G LT Q N+ P
Sbjct: 620 NEYLGGA--CAFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASP--- 674
Query: 455 SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADE--LKDDEEYEEILEDMRQEGGKF 512
+ A L P+KV+ L V +E L E EEILED+R E +F
Sbjct: 675 ---FYGIPDSAKSLL-----EEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVEYDRF 726
Query: 513 A 513
Sbjct: 727 G 727
>gi|198432986|ref|XP_002130494.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 2 [Ciona intestinalis]
Length = 472
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 146/359 (40%), Gaps = 124/359 (34%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPV-MPVQAMTQQATRHARRVYVGGLPPTA 257
AAGQIP + T Q G++ +PV Q TR ARR+YVG +P
Sbjct: 126 AAGQIP--------------LMATSQTMGSITAEVPVAG--SQMTRQARRLYVGNIPFGV 169
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
E ++ FF+ M I G PG ++ V IN +K FAF+E RSV+E + A+A DGI F
Sbjct: 170 TEDAMMDFFNNQMQ-IAGLAQAPGQPILAVQINLDKNFAFLEFRSVDETTQALAFDGINF 228
Query: 318 EGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLP--- 374
+K+RRPSDY P L S P ++L V T + ++F+GGLP
Sbjct: 229 MNQSLKIRRPSDYKP-----LPGSLEQPAIHLPGVISTVVQ----DSQHKMFIGGLPNYL 279
Query: 375 ---------------------------------------YYFTEAQIRELLESFGPLRGF 395
Y T+
Sbjct: 280 NDDQVKELLTSFGPLRAFNLVKDSATALSKGYAFAEFADYSLTDQ--------------- 324
Query: 396 DLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-NQPKPEQE 454
A A LNG+++GDK L V+RA+ GA N P
Sbjct: 325 ---------------------------AIAGLNGMQLGDKKLIVQRASIGAKNNP----- 352
Query: 455 SVLLHAQQQIALQRLMLQPGSVP-SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
I + + G+ P + V+CL +V +EL DDEEYEEI+ED++ E GK
Sbjct: 353 ------HGAIMIPGMAHATGAGPATTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKL 405
>gi|320590609|gb|EFX03052.1| splicing factor u2af large subunit [Grosmannia clavigera kw1407]
Length = 420
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 115/224 (51%), Gaps = 23/224 (10%)
Query: 297 FVEMRSVEEASNAMALDGIIFEG--------APVKVRRPSDYNPSLAATLGPSQPNPNLN 348
VE + +A+ A+AL+GI E + + ++RP DY P N
Sbjct: 1 MVEFKEPIDATVALALNGISMEAEDASGSGQSGLSIQRPKDYIVPAVVDYSVYHPGVVSN 60
Query: 349 LAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKG 408
+ ++ P +I + +P Y ++ Q+ ELL SFG LR F L+KDR T S+G
Sbjct: 61 VV-----------IDTPFKIAITNIPSYLSDEQVTELLVSFGELRAFVLLKDRSTEESRG 109
Query: 409 YAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQR 468
AFC Y + TD+A LNG+ +GD+ L V++A+ G Q SV + L
Sbjct: 110 VAFCEYTEPQSTDVAIQGLNGMDLGDRKLRVQKASIGITQ----VTSVEMGVNAMSLLAG 165
Query: 469 LMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ Q S S+VV L +V+A+EL ++++YE+I ED+ +E KF
Sbjct: 166 TISQEASDVSRVVQLLNMVTAEELVNNDDYEDICEDVTEECAKF 209
>gi|451849636|gb|EMD62939.1| hypothetical protein COCSADRAFT_200575 [Cochliobolus sativus
ND90Pr]
Length = 576
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 34/262 (12%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ ++R+YV LP Q + FF+ + G N D V+ +I K++A +E ++
Sbjct: 252 KQSKRLYVHNLPSGCTSQEIMEFFNTQLN--GLNVVSGPDPCVSAHIATSKEYAALEFKA 309
Query: 303 VEEASNAMALDGIIFE---GAP----VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
E+A+ A+A++GI GAP + +RRP DY + T + P +++V
Sbjct: 310 PEDATLALAMNGISMRDDGGAPDRAGLSIRRPKDY---ITPTADENAYPPGDEVSSVVK- 365
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
+ P+++ + +P Y E QIREL+E+ G L+ F LVKD T +G AFC Y
Sbjct: 366 -------DSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTSTDQHRGIAFCEYA 418
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS 475
D + D LN I +GD L V RA G +Q + L I+ ML S
Sbjct: 419 DNEIIDAVIEGLNDIPLGDGNLKVSRATVGL-----QQTTGLDGGVGAIS----MLAGAS 469
Query: 476 VP-----SKVVCLTQVVSADEL 492
S+VVCL +V++DEL
Sbjct: 470 AVENREHSRVVCLMNMVTSDEL 491
>gi|118489922|gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 787
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 19/275 (6%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 299
QAT RR+Y+ +P +A+E++V + + + G + ++ EK A VE
Sbjct: 289 QATHPIRRLYMENIPASASEKAVMDCLNNFLISSGVHHIQGTQPCISCIRQKEKGQALVE 348
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E+AS A++ DG F G+ +KVRRP D+ L S + A+G
Sbjct: 349 FLTPEDASAALSFDGRSFSGSIIKVRRPKDFIEVATGELEKSAA----AIDAIGDIVK-- 402
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+ P +IF+GG+ + + E+ +FGPL+ + ++ + +AF Y D SV
Sbjct: 403 ---DSPHKIFIGGISKVLSSKMLMEIASAFGPLKAYQFENRKDP--DEPFAFLEYADESV 457
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 479
T ACA LNG+K+G + +T +A A+ + S Q + +L+ P++
Sbjct: 458 TFKACAGLNGMKLGGQVITAIQAVPNASSSGSDGNSQFGQISQH---AKALLEK---PTE 511
Query: 480 VVCLTQVVSADELK--DDEEYEEILEDMRQEGGKF 512
V+ L V ++ L + E EE+LED+R E +F
Sbjct: 512 VLKLKNVFDSESLSSLSNTEVEEVLEDVRLECARF 546
>gi|189204129|ref|XP_001938400.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985499|gb|EDU50987.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 572
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 34/262 (12%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ ++R+YV LP Q + FF+ + G N D ++ +I K++A +E ++
Sbjct: 248 KQSKRLYVHNLPSGCTSQEIMEFFNNQLN--GLNVVSGNDPCLSAHIATSKEYAALEFKA 305
Query: 303 VEEASNAMALDGIIFE---GAP----VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
E+A+ A+A+ GI GAP + +RRP DY + T + P +++V
Sbjct: 306 PEDATLALAMTGISMRDEGGAPDRSGLSIRRPKDY---ITPTADENAYPPGDEVSSVVK- 361
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
+ P+++ + +P Y E QIREL+E+ G L+ F LVKD T +G AFC Y
Sbjct: 362 -------DSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTGTDQHRGIAFCEYA 414
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS 475
D + D LN I +GD L V RA G +Q + L I+ ML S
Sbjct: 415 DNEIIDAVIEGLNDIPLGDGNLKVSRATVGL-----QQSTGLDGGVGAIS----MLAGAS 465
Query: 476 VP-----SKVVCLTQVVSADEL 492
S+VVCL +V++DEL
Sbjct: 466 AAENHEHSRVVCLMNMVTSDEL 487
>gi|289741197|gb|ADD19346.1| splicing factor U2AF large subunit [Glossina morsitans morsitans]
Length = 423
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 147/363 (40%), Gaps = 125/363 (34%)
Query: 199 AAGQIPG-ANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTA 257
AAGQIP A P IP A+PV+ TR ARR+YVG +P
Sbjct: 72 AAGQIPANALPEIPQ--------------AAVPVV-----GSTITRQARRLYVGNIPFGV 112
Query: 258 NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIF 317
E + FF+Q M G A G+ V+ IN +K FAF+E RS +E + AMA DGI F
Sbjct: 113 TEDEMMEFFNQQMHLTGLAQAA-GNPVLACQINLDKNFAFLEFRSTDETTQAMAFDGISF 171
Query: 318 EG-----------------------------------------------APVKVRRPSDY 330
+G P + D
Sbjct: 172 KGQSLKIRRPHDYQPMPGVVESTPVAQPVANGVISAVVPDSPHKIFIGGLPNYLNE--DQ 229
Query: 331 NPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFG 390
L + G L A L +A GL
Sbjct: 230 VKELLLSFG--------QLRAFNLVKDAATGL---------------------------- 253
Query: 391 PLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK 450
SKGYAFC Y D S+TD A A LNG+++GDK L V+RA+ GA K
Sbjct: 254 ---------------SKGYAFCEYIDHSITDQAIAGLNGMQLGDKKLIVQRASVGA---K 295
Query: 451 PEQESVLLHAQQQIALQRL-MLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
Q + A I + L M+ P++V+CL +V+ DEL+D+EEYE+ILED+++E
Sbjct: 296 NAQNNHTTAAPVMIQVPGLSMVGISGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEEC 355
Query: 510 GKF 512
K+
Sbjct: 356 NKY 358
>gi|400602736|gb|EJP70338.1| splicing factor U2AF 65 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 576
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 205/466 (43%), Gaps = 85/466 (18%)
Query: 78 KDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDD-DDHYRSRDYD 136
+DR+RE+ R++ DRE DR++ R + R+DRD D++ R
Sbjct: 99 RDREREERYTGGRDRRGDREWDRDRGSSR---RDARRDDDGHGRRDRDGFDENRRGGRDR 155
Query: 137 RRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRS-RSKSKRISGFDMAPPA-SAMLAAG 194
R + R +E RRS S + R + + +R++ +D+ PP A+ +
Sbjct: 156 RDDGFARQQE----RRSPSPPKRREPTPDLTDVIPVLERKRRMTQWDIKPPGYEAVTSEQ 211
Query: 195 AGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLP 254
A + +PGA P M P Q G + + +R A+R+ V LP
Sbjct: 212 AKMSGMFPLPGA-PRQQQMDPTKLQAFMNQPAGGQ--VSSAGLKASNSRQAKRLLVSNLP 268
Query: 255 PTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN-----------------HEKKFAF 297
+ ++ FF N+ +N ++K FA
Sbjct: 269 SGTTDDALVAFF-------------------NLQLNGLNVISATDPCALSQLSNDKSFAV 309
Query: 298 VEMRSVEEASNAMALDGIIFE--GAPVKVRRPSDYNPSLAATLGPSQP-----NPNLNLA 350
+E ++ +A+ A+ALDGI E G + +RRP DY + P+ P NP++
Sbjct: 310 LEFKNTSDATVALALDGISMEANGPGLSIRRPKDY-------VMPAVPDDIMYNPDVVSD 362
Query: 351 AVGLTPGSAGGLEGPDRIF---VGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
+V PD I + LP + TE Q+ ELL +FG + F LVKDR T S+
Sbjct: 363 SV------------PDTIHKLSITNLPPFLTEEQVLELLAAFGKPKAFVLVKDRTTEESR 410
Query: 408 GYAFCVYQDL-SVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIAL 466
G AF Y + S + A AL+G+ +G K L + +A G Q + +A +A
Sbjct: 411 GIAFAEYAEPGSANEAALKALSGMDVGGKPLKITKACIGGTQVANFDAGI--NAISNLAG 468
Query: 467 QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
Q G ++V+ L +V+A+EL D+++YEEI +D+R E K+
Sbjct: 469 Q----GNGGEATRVLQLLNMVTAEELLDNDDYEEICDDVRDECSKY 510
>gi|452001453|gb|EMD93912.1| hypothetical protein COCHEDRAFT_1020092 [Cochliobolus
heterostrophus C5]
Length = 352
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 127/265 (47%), Gaps = 40/265 (15%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ ++R+YV LP Q + FF+ + G N D V+ +I K++A +E ++
Sbjct: 28 KQSKRLYVHNLPSGCTSQEIMEFFNTQLN--GLNVVSGPDPCVSAHIATSKEYAALEFKA 85
Query: 303 VEEASNAMALDGIIFE---GAP----VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
E+A+ A+A++GI GAP + +RRP DY P + N
Sbjct: 86 PEDATLALAMNGISMRDDGGAPDRAGLSIRRPKDY----------ITPTADEN----AYP 131
Query: 356 PG---SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
PG S+ + P+++ + +P Y E QIREL+E+ G L+ F LVKD T +G AFC
Sbjct: 132 PGDEVSSVVKDSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTSTDQHRGIAFC 191
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQ 472
Y D + D LN I +GD L V RA G +Q + L I+ ML
Sbjct: 192 EYADNEIIDAVIEGLNDIPLGDGNLKVSRATVGL-----QQTTGLDGGVGAIS----MLA 242
Query: 473 PGSVP-----SKVVCLTQVVSADEL 492
S S+VVCL +V++DEL
Sbjct: 243 GASAAENREHSRVVCLMNMVTSDEL 267
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 53/278 (19%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R +RR+Y+GG+ P + + F ++ M G T+ PG+ V+ + + +K FAF++MR+
Sbjct: 98 RQSRRLYIGGIVPGTPDVLIVDFLNREMNQ-RGMTSSPGNPVLAIQMTPDKNFAFLDMRT 156
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYN-------PSLAATLGPSQPNPNLNLAAVGLT 355
EEA+ +ALDGI FEG +++RP +Y PSL S + A G +
Sbjct: 157 SEEATMCIALDGIPFEGTVFRIKRPKEYEGREANDPPSLFGMPSSSGGGFSSQGGAQGGS 216
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
G + G + P++I++GGLP+ E QIRELL++FG +R F LV++ G SKG
Sbjct: 217 FGGSMGNDNPNKIYIGGLPFSLDEQQIRELLQTFGVIRNFSLVRE-GNGQSKG------- 268
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS 475
QP P + + + P
Sbjct: 269 -------------------------------QQPPPSMPYGAPSSFGAAPITPMQATP-- 295
Query: 476 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
VV L +V+ +EL D EEY++I++D+R+E K+
Sbjct: 296 ----VVQLLNMVTPEELMDPEEYQDIVDDIREECSKYG 329
>gi|428671645|gb|EKX72563.1| conserved hypothetical protein [Babesia equi]
Length = 455
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 36/297 (12%)
Query: 230 PVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI 289
P M + ATR R +YVG +PP ++ ++ F ++ + AI G T+ PG+ + +I
Sbjct: 61 PPMAPLGLDPLATRPYREIYVGNIPPVSDVSTLLDFLNEALIAING-TSMPGNPCLKGWI 119
Query: 290 NHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN- 348
+ + +AF+E+R++EEASN M L G+ G ++V RP Y P + A L PS P L+
Sbjct: 120 SSDSHYAFIELRTMEEASNCMQLTGLNCMGYNIRVNRPKTYTPEMLA-LAPSPTVPTLDP 178
Query: 349 -LAAVGL---------------TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 392
L A+GL + DR+ + +P ++ ++ +E+ G +
Sbjct: 179 SLLAMGLKALKNAREQIVAASDILATEKAKAMTDRLCIIDIPSETQDSDLKSAIEAIGQV 238
Query: 393 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT-VRRANQGANQPKP 451
+ + D SK YQ + I AL + K + + QG P
Sbjct: 239 KYIHFIND---DPSKRVCLFEYQHIEQQKI---ALEQLPANHKVIMAIDAVTQGIINPS- 291
Query: 452 EQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
+ +QQ L++ + VP++V+ L+ +VS +EL DD EY +I++D+R E
Sbjct: 292 -------YIRQQ--LEKCEIMRPEVPTRVLWLSNLVSKEELDDDAEYFDIIDDVRTE 339
>gi|340503018|gb|EGR29650.1| splicing factor u2af large subunit, putative [Ichthyophthirius
multifiliis]
Length = 438
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 36/304 (11%)
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q+ HA R+Y+G +P + + V F + + GG PG+ +++ + KKF F+
Sbjct: 109 QKNYIHALRIYIGNIPDPIDTEDVCHFVYKSLLESGG-LLEPGNPIISKKNDPIKKFIFL 167
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN--PSLAATLGPSQPNPNLNLAAVGLTP 356
++RS+EE S M LDGI+++G ++ RRP DY P + T + P L+ + +
Sbjct: 168 QLRSIEETSACMQLDGILYKGKSLRFRRPKDYTTMPQVEGT----RKIPILDRNKLRIVQ 223
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
+++ V +P +E + ++L+++G LR F L D TG SKG+AFC Y
Sbjct: 224 TQVENTY--NKLQVMNIPETISEEHVMQILQNYGELRSFHLAVDIYTGESKGFAFCEYLT 281
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQ----------------ESVL--- 457
T L+G ++ +K + V+R N P EQ +S+L
Sbjct: 282 DKATMDCLNQLSGQQILNKIINVKRCNPNLAPPVEEQMQPIEVLVKNLCDFINKSILESG 341
Query: 458 LHAQQQIALQRLMLQPGSVPS--------KVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
Q+ +Q+++ G S V+ + V+ +++D EYE I D++Q+
Sbjct: 342 FKDIQEEYIQKVISNEGQKYSGLNQEEATSVLKIKNVIDKQVIEEDPEYEFIYNDLKQQL 401
Query: 510 GKFA 513
KF
Sbjct: 402 VKFG 405
>gi|359477752|ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
Length = 895
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 214/534 (40%), Gaps = 138/534 (25%)
Query: 49 ERESSRSREKEKE---KGRDRDRDRDRDRTREKDRD---REKSRDMDREKSRDREKDREK 102
+R + RSR+ EKE K R + +++R+R K D R +S +DR++ R+ R +
Sbjct: 186 DRYADRSRKSEKESKRKHRTGEDEKNRERNSMKKHDPGKRHESEFLDRKERRESPPSRYE 245
Query: 103 DRHH-------------RDRHRERSRERSERRKDRDDDDH-------YRSRDYDRRKDYD 142
+ RD+ R+++R +H + R + D D
Sbjct: 246 ESRPKRRRSRSRERDKDRDKRSSSLSPRAQKRTSHHGREHAELSLHSLKDRSGRQHSDAD 305
Query: 143 RDR-----EDRHKRRSQSRSRGRSEHRSRSR----------SRSRSKSKRISGFDMAPPA 187
R+R H RR + G + R R +RS K+ +G+D+ P
Sbjct: 306 RNRISNNGSSSHFRRHGGSASGLGGYSPRKRRTEAAIKTPSPTNRSPEKKSAGWDLPPSR 365
Query: 188 SAMLAAGAGAAAAG----QIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQ---- 239
+ + AG+ ++ + +P P P+ LP + A+++
Sbjct: 366 TDGMNAGSVLSSLQVLKPTVSSNADELPSAVPVAVPVTATTAKPPLPRIYSDAVSKNKNV 425
Query: 240 --------QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
QATR RR+YV LP +++E+++ + + + G N ++ I+
Sbjct: 426 SIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHK 485
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 351
EK A VE + E+AS A++ DGI F G+ +K+RRP D+
Sbjct: 486 EKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDF--------------------- 524
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
+ E+ +FGPL+ + + + G + AF
Sbjct: 525 ------------------------------LMEIAAAFGPLKAYRFQVNEDLG--EPCAF 552
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-------NQP---KPEQESVLLHAQ 461
Y D SVT ACA LNG+K+G + LTV +A A N P PE LL
Sbjct: 553 LEYVDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAKPLLER- 611
Query: 462 QQIALQRLMLQPGSVPSKVVCLTQVVSADELK--DDEEYEEILEDMRQEGGKFA 513
P++V+ L VV+ D+L + E EEILED+R E +F
Sbjct: 612 ---------------PTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFG 650
>gi|357017085|gb|AET50571.1| hypothetical protein [Eimeria tenella]
Length = 527
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 36/304 (11%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT-------AGPGDAVVNVY---- 288
++ R ARR+++ +PP E + FF+ + A+ T A ++ V
Sbjct: 159 ESDRIARRLFISNIPPGTTEADICGFFNGALLAVNAQTGYTDLSLASDKPQLLPVERCEG 218
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY------NPSLAATLGPSQ 342
+ + F+++RS E + LDGI F +KV RP +Y +P+ + +
Sbjct: 219 LQENSRHCFLDLRSHEWVVLCLKLDGITFNNNSLKVLRPKEYVQPPGGDPAKTVHIPELE 278
Query: 343 --PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKD 400
P N P SA ++++ LP E Q+R+LLE FG LR +L+K+
Sbjct: 279 RGTKPQQNEVRATAPPRSADC-----KLYIQNLPPEMGEDQVRDLLEQFGKLRVLNLIKN 333
Query: 401 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRAN---------QGANQPK- 450
R+TG +GY F Y+D VTD A ALNG G L+V+R+N Q +
Sbjct: 334 RQTGKHRGYGFFEYEDPEVTDQAIEALNGFVCGASVLSVQRSNFMPDLLPTKQHTTEVTA 393
Query: 451 -PEQESVLLHAQQQIALQ-RLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
P S + + +A+Q R G PS+VV L + +++ D +E ++D R E
Sbjct: 394 LPSSTSYAVLSDPVVAIQVRAGRTIGEKPSRVVQLLNTIYPEDIMTDSSHEAAVKDTRSE 453
Query: 509 GGKF 512
K+
Sbjct: 454 AEKY 457
>gi|213408691|ref|XP_002175116.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|212003163|gb|EEB08823.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 511
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
A+R ARR+ V LP + + F + ++ + V +Y +++A +E+
Sbjct: 184 ASRQARRLKVKELPAEFEVEDLKNVFEESISTSSFHKDRDTKHVTAIYPCKTERYAIIEL 243
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDY-NPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E+A+ + F+ V + R Y P +++ + +P +LN
Sbjct: 244 ATPEDATFIWGARKLKFKNETVLIDRLEGYIVPQISSEVAQKRPKNDLNQKV-------- 295
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
L+ D++++G LP Y E QI ELL+ FG L+ L K+ S+GYAFC Y
Sbjct: 296 --LDSADKVYIGSLPLYLNEDQISELLKPFGELQSLFLAKNSADMTSRGYAFCEYISSES 353
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 479
A LN ++ GD L V+ A G QP P SV + A +++ + P++
Sbjct: 354 ATAAVQGLNNMEFGDTRLMVQFACVGIQQPVPSPRSVGMAALIELSKS----STEAAPTR 409
Query: 480 VVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
V+ + ++ ADE D E+YE+I + ++ + ++
Sbjct: 410 VLQIHNLLDADETLDTEDYEDIRKSVQNKCNEY 442
>gi|358369529|dbj|GAA86143.1| splicing factor u2af large subunit [Aspergillus kawachii IFO 4308]
Length = 571
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 128/303 (42%), Gaps = 76/303 (25%)
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
Q +T + V + GL N D ++ + +
Sbjct: 254 QTVTGETLLAFFNVQLNGL----------------------NVIESVDPCISAQVAQDHS 291
Query: 295 FAFVEMRSVEEASNAMALDGIIFE-------------GAPVKVRRPSDYNPSLAATLGPS 341
FA +E +S +A+ A+A DGI E ++VRRP DY
Sbjct: 292 FALLEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQGLEVRRPKDY----------- 340
Query: 342 QPNPNLNLAAVGLTPGSA------GGL-----EGPDRIFVGGLPYYFTEAQIRELLESFG 390
+ PG A G L + P++I V +P+Y E + LL+SFG
Sbjct: 341 ------------IVPGGAEQEYQEGVLLNEVPDSPNKICVSNIPHYIPEEPVTMLLKSFG 388
Query: 391 PLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPK 450
L+ F LVKD T S+G AFC Y D S T IA LNG+++GD+ L V RA+ G Q
Sbjct: 389 ELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHLKVVRASIGMTQAA 448
Query: 451 PEQESV-LLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEG 509
V + + Q L S+V+ L +V+ +EL D E+YEEI +D+R E
Sbjct: 449 GLDMGVNAMSMFAKTTSQDLET------SRVLQLLNMVTPEELMDPEDYEEICDDVRDEC 502
Query: 510 GKF 512
K+
Sbjct: 503 SKY 505
>gi|108706082|gb|ABF93877.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 720
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 54/343 (15%)
Query: 130 YRSRDYDRRKDYDRDREDRHK------------RRSQSRSRGRSEHRSRSRSRS------ 171
Y S D RRK ++ DRH+ RR +SR G S + ++ +
Sbjct: 336 YHSMDKSRRKHFE---TDRHRTSWNDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIK 392
Query: 172 ------RSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMF------PN--M 217
RS K+ + +D P A+ + + + + +P F PN +
Sbjct: 393 TASLVIRSPEKKSATWDQLPVATDL--SNFVTTLQSTVGLKDSTVPVNFTTSKQDPNTTI 450
Query: 218 FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ-VMAAIGGN 276
++TG L V VQ QATR RR+++ LP A E + ++ ++++ +
Sbjct: 451 GTILTGSN---LAVDSVQLT--QATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASH 505
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA 336
++ IN +K+ AFVE + E+A+ A++ DG F G+ +K+RRP +Y A
Sbjct: 506 IQRSKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVE--MA 563
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
+ P +P+ + L + + + P +IF+ G+ + + E++ SFGPL +
Sbjct: 564 HVAPKKPSEEIKLISDVVA-------DSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYR 616
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ + G + AF Y D S+T ACA LNG+K+G LT
Sbjct: 617 FLFNEYLGGA--CAFLEYIDHSITSKACAGLNGMKLGGGILTA 657
>gi|432090458|gb|ELK23883.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 423
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%)
Query: 367 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 426
++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A A
Sbjct: 263 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAG 322
Query: 427 LNGIKMGDKTLTVRRANQGA 446
LNG+++GDK L V+RA+ GA
Sbjct: 323 LNGMQLGDKKLLVQRASVGA 342
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 17/108 (15%)
Query: 265 FFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 324
FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+E + AMA G +K+
Sbjct: 4 FFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-------GQSLKI 55
Query: 325 RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGG 372
RRP DY P + PS P + V P SA ++F+GG
Sbjct: 56 RRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGG 94
>gi|5822501|pdb|2U2F|A Chain A, Solution Structure Of The Second Rna-Binding Domain Of
Hu2af65
Length = 85
Score = 107 bits (268), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/80 (60%), Positives = 63/80 (78%)
Query: 367 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 426
++F+GGLP Y + Q++ELL SFGPL+ F+LVKD TG SKGYAFC Y D++VTD A A
Sbjct: 3 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAG 62
Query: 427 LNGIKMGDKTLTVRRANQGA 446
LNG+++GDK L V+RA+ GA
Sbjct: 63 LNGMQLGDKKLLVQRASVGA 82
>gi|108706081|gb|ABF93876.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 704
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 54/343 (15%)
Query: 130 YRSRDYDRRKDYDRDREDRHK------------RRSQSRSRGRSEHRSRSRSRS------ 171
Y S D RRK ++ DRH+ RR +SR G S + ++ +
Sbjct: 336 YHSMDKSRRKHFE---TDRHRTSWNDGYSSGSYRRYESRLGGYSPRKRKTAPKDEQTTIK 392
Query: 172 ------RSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMF------PN--M 217
RS K+ + +D P A+ + + + + +P F PN +
Sbjct: 393 TASLVIRSPEKKSATWDQLPVATDL--SNFVTTLQSTVGLKDSTVPVNFTTSKQDPNTTI 450
Query: 218 FPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ-VMAAIGGN 276
++TG L V VQ QATR RR+++ LP A E + ++ ++++ +
Sbjct: 451 GTILTGSN---LAVDSVQLT--QATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASH 505
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA 336
++ IN +K+ AFVE + E+A+ A++ DG F G+ +K+RRP +Y A
Sbjct: 506 IQRSKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVE--MA 563
Query: 337 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
+ P +P+ + L + + + P +IF+ G+ + + E++ SFGPL +
Sbjct: 564 HVAPKKPSEEIKLISDVVA-------DSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYR 616
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ + G + AF Y D S+T ACA LNG+K+G LT
Sbjct: 617 FLFNEYLGGA--CAFLEYIDHSITSKACAGLNGMKLGGGILTA 657
>gi|357114131|ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840355 [Brachypodium
distachyon]
Length = 840
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 136/280 (48%), Gaps = 30/280 (10%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN-TAGPGDAVVNVYINHEKKFAFV 298
QATR RR+++ LP +A+E + + + N ++ IN EK AFV
Sbjct: 331 QATRPLRRLHIENLPSSASEDMLIGCLNDFFLSSDVNHIQKSKQPCLSCTINKEKHQAFV 390
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
E + E+A+ A++ DG F G+ +K+RRP +Y A + P + + LA
Sbjct: 391 EFLTPEDATAALSFDGRSFNGSALKIRRPKEYIE--MANVVPKKTVEEIKLA-------- 440
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
+ + P +IFV G+ + + E++ SFG L + +D E + + AF Y D S
Sbjct: 441 SDVADSPHKIFVAGISGVISSEMLMEIVSSFGQLAAYRF-QDHEALSGR-CAFLEYIDHS 498
Query: 419 VTDIACAALNGIKMGDKTLTVRRAN----QGANQPKPEQESVLLHAQQQIALQRLMLQPG 474
+TD ACA LNG+K+G LT + + N+ P ++ A +++L+
Sbjct: 499 ITDKACAGLNGMKLGGCILTAVQVFPNPLEACNEASP------FYSIPDSA--KMLLE-- 548
Query: 475 SVPSKVVCLTQVVSADE--LKDDEEYEEILEDMRQEGGKF 512
P++V+ L V +E L E EEI+ED+R E +F
Sbjct: 549 -APTEVLQLKNVFDREEYLLLSKSELEEIMEDIRMECARF 587
>gi|242037001|ref|XP_002465895.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
gi|241919749|gb|EER92893.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
Length = 969
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 30/280 (10%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 299
QATR RR+++ LP +A E + + + G ++ IN EK+ AFVE
Sbjct: 467 QATRPLRRLHIENLPDSATEDKLIDCLNDFLLPTGIKPQR-SKPCLSCTINREKRQAFVE 525
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E+A+ A++ DG G+ +++RRP +Y ++ T P +P L + +
Sbjct: 526 FLTPEDATAALSFDGRSLNGSTLRIRRPKEYVETVNVT--PKKPAEETALISDVVA---- 579
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+ P +IF+ G+ + + E++ +FGPL + + + E G AF Y D S+
Sbjct: 580 ---DSPHKIFIAGIAGVISSEMLMEIVSAFGPLAAYRFLFNSELGGP--CAFLEYADRSI 634
Query: 420 TDIACAALNGIKMGDKTLTVRRA-----NQGANQPKPEQESVLLHAQQQIALQRLMLQPG 474
T ACA LNG+ +G LT + AN+ P + + A L
Sbjct: 635 TSKACAGLNGMMLGGCVLTAVHVFPNPPVEAANEASP------FYGIPENAKSLL----- 683
Query: 475 SVPSKVVCLTQVVSADE--LKDDEEYEEILEDMRQEGGKF 512
P+KV+ L +E L E EE LED+R E +F
Sbjct: 684 KEPTKVLQLKNTFEREEYMLLSKSELEETLEDVRVECTRF 723
>gi|297823139|ref|XP_002879452.1| hypothetical protein ARALYDRAFT_321074 [Arabidopsis lyrata subsp.
lyrata]
gi|297325291|gb|EFH55711.1| hypothetical protein ARALYDRAFT_321074 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 207/481 (43%), Gaps = 103/481 (21%)
Query: 67 DRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDD 126
D RD + + D+ K+++ D +K+R+ + RH D + S E SER +R +
Sbjct: 20 DVPRDESSIKHDNEDKRKNQNGDHKKNREMTISK---RH--DSGKVHSVEVSERM-ERKE 73
Query: 127 DDHYRSRDYDRRK------DYDRDREDR--------HKRRSQSRSRGRSEHRSRSRSRSR 172
RD ++ D+ +DR+ R S+S G S + R + ++
Sbjct: 74 QPKAHERDMREKRRRSRSRDHGQDRQKRPSPLPRAEKATASKSELGGYSPRKRREEASTK 133
Query: 173 SKS-------KRISGFDMAPPASAMLAAG---AGAAAAGQIPGANPAIP-GMFPNMFPLV 221
+ S K+ + +D+AP ++ + +G +G AA Q A P I + PL+
Sbjct: 134 AVSPPNLSSEKKSAKWDLAPTVTSGMFSGPVFSGLQAATQT--AYPTISEASLMLLKPLM 191
Query: 222 TGQQFGALPVMPVQAM----TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNT 277
G F P + + ++TR RR+Y +P +A+E+S+ F+ M + G N
Sbjct: 192 EGT-FRTPPPRQITSFDSVQLTESTRPMRRLYAENVPDSASEKSLIECFNGYMLSSGSNH 250
Query: 278 AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAAT 337
+ ++ IN EK A VE + ++AS A++LDG F G+ +K+RRP DY
Sbjct: 251 IKGSEPCISCIINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDY------- 303
Query: 338 LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL 397
VG T + E++ FGPL+ +
Sbjct: 304 --------------VGTT--------------------------LMEIVSVFGPLKAYRF 323
Query: 398 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR----ANQGANQPKPEQ 453
V + + ++ A+ Y D SVT ACA LNG+K+G +T A+ A P
Sbjct: 324 VSNNDL--NQQCAYLEYTDGSVTLKACAGLNGMKLGGSVITAVCAFPDASSVAVNENPPF 381
Query: 454 ESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADE--LKDDEEYEEILEDMRQEGGK 511
+ HA+ + P ++ L VV ++ L ++E +EIL+D+R E +
Sbjct: 382 YGIPGHAKPLLG----------KPKHILKLKNVVDPEDFTLLSEQEVKEILDDVRLECAR 431
Query: 512 F 512
+
Sbjct: 432 W 432
>gi|396472864|ref|XP_003839217.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
gi|312215786|emb|CBX95738.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
Length = 587
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 35/282 (12%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
+ ++R+YV LP + + + FF+ + G N D ++ I K++A +E ++
Sbjct: 264 KQSKRLYVHNLPSGVSSEELMEFFN--LQLNGLNVVSGQDPCLSAQIATSKEYAALEFKT 321
Query: 303 VEEASNAMALDGIIF---EGAP----VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 355
E+A+ A+A++GI G P + +RRP DY P + A
Sbjct: 322 PEDATVALAMNGISMREESGGPDRSGLSIRRPKDY------------ITPTADDNAYTGD 369
Query: 356 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
S+ + P+++ + +P Y E Q+REL+ + G L+ F LVKD T +G AFC Y
Sbjct: 370 EVSSVVKDSPNKLSIVNIPTYIEEEQVRELVGTMGKLKAFVLVKDESTDQHRGIAFCEYA 429
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGS 475
D + D LN I +GD L V RA G +Q + L I+ ML S
Sbjct: 430 DNEIVDAVIEGLNDIPLGDGNLKVTRATVGL-----QQTAGLDGGVGAIS----MLAGAS 480
Query: 476 VP-----SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
S+V+CL +V+++EL +DEEYEEI ED+ +E GKF
Sbjct: 481 AAENREHSRVICLMNMVTSEELINDEEYEEIKEDIEEECGKF 522
>gi|346324367|gb|EGX93964.1| splicing factor u2af large subunit [Cordyceps militaris CM01]
Length = 583
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 202/452 (44%), Gaps = 69/452 (15%)
Query: 98 KDREKDRHH---RDRH--------RERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
+DRE++ + RDR RE R+R R+D DD + R D R
Sbjct: 100 RDREREERYTGGRDRRGGPSGGGDREWDRDRGTSRRDARRDDDVQGRRDRDGGDDHRRGG 159
Query: 147 DRHKRRSQSRSRGRSEHRSRSRSRSR-------------SKSKRISGFDMAPPA-SAMLA 192
+ +R + E RS S + R + +R++ +D+ PP A+ +
Sbjct: 160 RDRRDDGFAR---QQERRSPSPPKRREPTPDLTDIIPVLERKRRMTQWDIKPPGYEAVTS 216
Query: 193 AGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGG 252
A + +PGA P + P + Q G + + +R ARR+ V
Sbjct: 217 EQAKMSGMFPLPGA-PRQQQVDPTKLQALMNQPAGGQ--VSSAGLKANNSRQARRLLVSD 273
Query: 253 LPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMAL 312
+P E ++ FF+ + G N D ++++K FA +E ++ +A+ A+AL
Sbjct: 274 IPSGTTEDALVAFFN--LQLNGLNVIEATDPCALCQLSNDKSFAVLEFKNTGDATVALAL 331
Query: 313 DG--IIFEGAPVKVRRPSDYNPSLAATLGPSQP-----NPNLNLAAVGLTPGSAGGLEGP 365
DG ++ + + +RRP DY + P+ P NP + +V P
Sbjct: 332 DGSSMVADTPGLSIRRPKDY-------VMPAVPDEIIFNPEVVSNSV------------P 372
Query: 366 D---RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY-QDLSVTD 421
D ++ + +P + TE Q+ ELL +FG + F LVK+R T S+G AF Y + + +
Sbjct: 373 DTIHKLCITNIPPFLTEDQVLELLAAFGKPKAFVLVKERSTEESRGIAFAEYVEPTNANE 432
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVV 481
A LNG+ +G K L R+A G Q + +A +A Q G ++V+
Sbjct: 433 PALNTLNGMDVGGKKLKARKACVGGTQVANFDAGI--NAISNLAGQ----GNGGDATRVL 486
Query: 482 CLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
L +V+A+EL D+++YEEI ED+R E K+
Sbjct: 487 QLLNMVTAEELLDNDDYEEICEDVRDECSKYG 518
>gi|312078073|ref|XP_003141580.1| U2af splicing factor protein 1 [Loa loa]
Length = 460
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 129/300 (43%), Gaps = 97/300 (32%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
T +RR+YVG +P +E ++ FF+Q M G A PG+ V+ +N +K FAF+E
Sbjct: 185 VTCQSRRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQA-PGNPVLACQMNLDKNFAFIEF 243
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS---------LAATLGPSQPN------- 344
RS++E + MA DGI F G +K+RRP DY P + + + P P+
Sbjct: 244 RSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLGNMMVSNIVPDSPHKIFIGGL 303
Query: 345 PN-------------------LNLA---AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 382
P+ NL + G++ G
Sbjct: 304 PSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKG------------------------- 338
Query: 383 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
YAF Y D S+TD A A LNG+++GDK L V+ +
Sbjct: 339 --------------------------YAFAEYLDPSLTDQAIAGLNGMQLGDKNLVVQLS 372
Query: 443 NQGANQPKPEQESVLLHAQQQIALQRLMLQPGS-VPSKVVCLTQVVSADELKDDEEYEEI 501
A + +V + QI + + L G+ P++V+CL +V+ DELKDDEEYE I
Sbjct: 373 CANA------RNNVAQNTFPQIQVAGIDLSHGAGPPTEVLCLMNMVTEDELKDDEEYEGI 426
>gi|169602913|ref|XP_001794878.1| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
gi|160706286|gb|EAT88221.2| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
Length = 594
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 31/261 (11%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
++ ++R+YV LP + + FF+ + G N D ++ I K +A +E +
Sbjct: 270 SKQSKRLYVHNLPSGTTSEELLEFFN--LQLNGLNVVSGQDPCLSAQIASSKTYAALEFK 327
Query: 302 SVEEASNAMALDGIIFE---GAP----VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
+ E+A+ A+A+ GI G P + +RRP DY + PS A
Sbjct: 328 TPEDATVALAMSGISMRDDGGGPDRSGLSIRRPKDY-------ITPS--------ADENA 372
Query: 355 TPG---SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
PG S+ + P+++ + +P + E QIREL+E+ G L F LVKD + +G AF
Sbjct: 373 YPGDEVSSVVKDSPNKLSIVNIPTFIEEEQIRELVETMGKLNAFVLVKDISSEQHRGIAF 432
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLML 471
C Y D V + LN I +G+ L V RA G Q V + A L
Sbjct: 433 CEYADNEVVNAVIEGLNDITLGEGNLKVSRATVGMQQNAGLDGGVNAISMLASAEPTSNL 492
Query: 472 QPGSVPSKVVCLTQVVSADEL 492
+ G +VVCL +V++DEL
Sbjct: 493 EHG----RVVCLMNMVTSDEL 509
>gi|255575831|ref|XP_002528813.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223531725|gb|EEF33547.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 844
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 172/419 (41%), Gaps = 115/419 (27%)
Query: 134 DYDRRKDYDRDREDRHKRRSQSRSR--GRSEHRSRSRSRSRSKS-------KRISGFDMA 184
D DR K + +KR S SR G S + RS + +R+ S K+ + +D+A
Sbjct: 271 DIDRNKITNNGSTGHYKRHGGSASRLGGYSPRKRRSEAAARTPSPTKHSPEKKKAKWDLA 330
Query: 185 PPASAMLAAGAGAAAAGQIP---GANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQ-- 239
P GA + + +P + I + N V+ ++PV P+ ++
Sbjct: 331 P-------EGADSTFSVSVPPIFKLSNQIASL--NARATVSAVPVASIPVKPLSGVSSNI 381
Query: 240 ---------------QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 284
QATR RR+YV +P A+E++V + ++ + G N
Sbjct: 382 LLTNKNDTIDSVQLTQATRPMRRLYVENIPAEASEKAVLERLNNLLISSGVNHIQGTQPC 441
Query: 285 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 344
++ I+ EK A VE + E+AS A++ DG F G+ +K+RRP D+ +A+T GP
Sbjct: 442 ISCIIHKEKGQALVEFLTPEDASAALSFDGSYFSGSTIKIRRPKDFIMEIASTFGP---- 497
Query: 345 PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETG 404
L A Y+F + + GP
Sbjct: 498 ----LKA-----------------------YHF-----ENIDDVNGPC------------ 513
Query: 405 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN-------QP---KPEQE 454
AF Y D SVT ACA LNG+K+G + ++ + A+ QP PEQ
Sbjct: 514 -----AFVEYADQSVTFRACAGLNGMKLGGQVISAVQVIPNASTLEIDGKQPFYGVPEQA 568
Query: 455 SVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFA 513
LL Q+ + + P ++PS L+++ E EE+LED+R E +F
Sbjct: 569 KPLLDKPTQVLKLKNLFDPETLPS----LSRI----------EIEEVLEDVRLECARFG 613
>gi|324503285|gb|ADY41429.1| Splicing factor U2AF 65 kDa subunit [Ascaris suum]
Length = 522
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 139/310 (44%), Gaps = 91/310 (29%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
T +RR+YVG +P +E ++ FF+Q M G A PG+ V+ +N +K FAF+E
Sbjct: 205 VTCQSRRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQA-PGNPVLACQMNLDKNFAFIEF 263
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNP-SLAATLG-------------------- 339
RS++E + MA DGI F G +K+RRP DY P S + +G
Sbjct: 264 RSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDMGNMMVSNIVADSPYKIFIGGL 323
Query: 340 PSQPNPN--------------LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIREL 385
PS N NL
Sbjct: 324 PSYLNAEQVKELLSSFGQLKAFNLVTDV-------------------------------- 351
Query: 386 LESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG 445
TG SKGYAF Y D S+TD A A LNG+++GDK L V+ +
Sbjct: 352 ----------------STGVSKGYAFAEYLDPSLTDQAIAGLNGMQLGDKNLVVQLSCAN 395
Query: 446 ANQPKPEQESVLLHAQQQIALQRLMLQPGS-VPSKVVCLTQVVSADELKDDEEYEEILED 504
A + ++ A QI + + L G+ P++V+CL +V+ +ELK+DEEYE+ILED
Sbjct: 396 A------RAAMSTTAFPQIQVAGIDLSHGAGPPTEVLCLMNMVTEEELKEDEEYEDILED 449
Query: 505 MRQEGGKFAF 514
+R+E K+ F
Sbjct: 450 IREECAKYGF 459
>gi|413956976|gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 635
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 31/280 (11%)
Query: 240 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 299
QATR RR+++ LP +A E + + + + G ++ IN EK+ AFVE
Sbjct: 128 QATRPLRRLHIENLPDSATEDKLIDCLNDFLLSTGSKLQR-SKPCLSCTINREKRQAFVE 186
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E+A+ A++ DG G+ +++RRP +Y ++ T P + ++ V
Sbjct: 187 FLTPEDATAAISFDGRSLNGSVLRIRRPKEYVETVNVT--PKKAEETALISDV------- 237
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+ P +IF+ G+ + + E++ +FGPL + + + E G AF Y D SV
Sbjct: 238 -VADSPYKIFIAGIAGVISSKMLMEIVSAFGPLAAYRFLFNNELGGP--CAFLEYADRSV 294
Query: 420 TDIACAALNGIKMGDKTLTVRRA-----NQGANQPKPEQESVLLHAQQQIALQRLMLQPG 474
T ACA LNG+ +G + LT + AN+ P + A +L+L+
Sbjct: 295 TSKACAGLNGMMLGGRVLTAVHVFPNPHVEAANEASP------FYGIPDNA--KLLLKE- 345
Query: 475 SVPSKVVCLTQVVSADE--LKDDEEYEEILEDMRQEGGKF 512
P+KV+ L V +E L E EE LED+R E +F
Sbjct: 346 --PTKVLQLKNVFEREEYMLLSKSELEETLEDVRVECTRF 383
>gi|312372039|gb|EFR20089.1| hypothetical protein AND_20681 [Anopheles darlingi]
Length = 384
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 113/236 (47%), Gaps = 43/236 (18%)
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTG 223
++RSR R S +D+ PP + A AAGQIP AN +V
Sbjct: 81 KNRSRRRKPSLY---WDVPPPGFEHITPLQYKAMQAAGQIP-AN------------IVAD 124
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
A+PV+ TR ARR+YVG +P E+ + FF+Q M + G G+
Sbjct: 125 TPQAAVPVV-----GSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNP 178
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
V+ IN +K FAF+E RS++E + AMA D I F+G +K+RRP DY QP
Sbjct: 179 VLACQINLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDY-----------QP 227
Query: 344 NPNLNLAAVGLTPGSAGGLEG---PD---RIFVGGLPYYFTEAQI--RELLESFGP 391
P + +A P G+ PD +IF+GGLP Y E Q+ L+ S GP
Sbjct: 228 MPGMTDSATVNVPEKFSGVISTVVPDSAHKIFIGGLPNYLNEDQVPGLSLVGSSGP 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 33/178 (18%)
Query: 367 RIFVGGLPYYFTEAQIRELLESFGPLRGF-----DLVKDRETGNSKGYAFCVYQDLSVTD 421
R++VG +P+ TE ++ E L G + V + K +AF ++ + T
Sbjct: 143 RLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETT 202
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQP---------KPEQESVLLHAQQQIALQRLML- 471
A A + I ++L +RR + P PE+ S ++ + ++ +
Sbjct: 203 QA-MAFDSINFKGQSLKIRRPHDYQPMPGMTDSATVNVPEKFSGVISTVVPDSAHKIFIG 261
Query: 472 ----------QPG-------SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
PG P++V+CL +V+ DELKD+EEYE+ILED+R+E K+
Sbjct: 262 GLPNYLNEDQVPGLSLVGSSGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKY 319
>gi|449498643|ref|XP_004160593.1| PREDICTED: uncharacterized LOC101213128 [Cucumis sativus]
Length = 918
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 225/566 (39%), Gaps = 147/566 (25%)
Query: 33 ADDHSDSKPQHGSRDYERESSR-SREKEKEKGRDRDRDRDRDRTREK-----DRDRE--- 83
++ S KPQ+G D R+S R S+ + E +D D DR+RD R+ DR+R+
Sbjct: 180 SEKESKRKPQNGEDDRNRDSKRKSQNVDDEINKDGDDDRNRDSKRKSQNGDDDRNRDSKR 239
Query: 84 KSRDMDREKSRDREKDREKD--RHHRDRHRERSR-----------ERSERRKDRDDD--- 127
KS++ D +++RD+ ++ D +HH +RER R +RR+ R D
Sbjct: 240 KSQNGDDDRNRDKYIAKKHDHGKHHDLENRERKEAVVSLTSRYEDSRLKRRQKRSPDRES 299
Query: 128 DHYRS---------------------------------RDYDRRKDYDRDREDRHKRRSQ 154
H RS D +R D+ +++R S
Sbjct: 300 KHRRSVSLSPRSHKHSTKLARQKELPLESHVKKSGRWRSDSERTGDFTNTSNSQYRRHSG 359
Query: 155 SRS--------RGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGA 206
S S + R+E ++ S R+ ++ D+ P L +G+ A P +
Sbjct: 360 STSGLGGYSPRKRRTESAVKTPSPLRTPEEKNEVLDLPPTEKVGLFSGS---VASNFPPS 416
Query: 207 NPAIPGMFPN------MFPLVTGQQFGALPVMPVQAMTQ---------QATRHARRVYVG 251
NP + N F G+ + + T+ QATR RR+Y+
Sbjct: 417 NPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAMKTKVSLDLVQLTQATRPMRRLYIE 476
Query: 252 GLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA 311
LP +A+E+++ + + + G N ++ I+ ++ A VE + E+AS A+
Sbjct: 477 NLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQALVEFLTPEDASAALL 536
Query: 312 LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVG 371
DG F G+ +K+RRP DY +L
Sbjct: 537 FDGSDFSGSTLKIRRPKDYIETL------------------------------------- 559
Query: 372 GLPYYFTEAQIRELLESFGPLRGFDL-VKDRETGNSKGYAFCVYQDLSVTDIACAALNGI 430
R+++ +FG L+ + + D G AF Y D SV ACA LNG+
Sbjct: 560 -----------RDVVTAFGRLKAYHFEINDDLNG---PCAFLEYVDESVVSKACAGLNGM 605
Query: 431 KMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ-RLMLQPGSVPSKVVCLTQVVSA 489
K+G + L V A P P E I + +LQ PS V+ + V +A
Sbjct: 606 KIGGQVLKVFPA-----VPFPLTERTGCQPCYGIPEHVKPLLQR---PSVVLKINNVFNA 657
Query: 490 DELK--DDEEYEEILEDMRQEGGKFA 513
D L + + +E+LED+R E +F
Sbjct: 658 DVLPVLSESDIDEVLEDIRFECARFG 683
>gi|403223258|dbj|BAM41389.1| snRNP splicing factor U2AF [Theileria orientalis strain Shintoku]
Length = 534
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 40/311 (12%)
Query: 224 QQFGALPVMPVQAMTQQ-------ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGN 276
+QFG + A+ + ATR R +Y+G +PP + + +Q + ++ G
Sbjct: 95 KQFGLANYTSIHAIGSETSGLDPLATRPYREIYIGNIPPVGDIAILLDIINQALISVNG- 153
Query: 277 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA 336
T+ PG+ + +I+ + +AFVE+R++EEASN M L G+ G +KV RP Y+P L +
Sbjct: 154 TSMPGNPCLKGWISSDGHYAFVELRTMEEASNCMQLTGLNIMGHNIKVNRPKTYDPDLMS 213
Query: 337 TL-GPSQPNPNLNLAAVGL---------------TPGSAGGLEGPDRIFVGGLPYYFTEA 380
P+ P + +L A+GL + DR+ + +P +
Sbjct: 214 KAPSPTVPTLDPSLLAMGLQALKSAREQIVAASDVLAAEKAKVMTDRLCIVDIPPEADKQ 273
Query: 381 QIRELLESFGPLRGFDLVKD-RETGNSKGYAFCVYQDLSVTDIACAALNGI-KMGDK-TL 437
+ L+ S G ++ V + E+G +K Y ++ D A+ I KM + L
Sbjct: 274 TVINLVHSMGEVKYTYFVDEPAESGTNKRVFLFEYMNM---DHQKKAMEEIPKMNYRLIL 330
Query: 438 TVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEE 497
+ QG P+ + ++Q L+ + VP++ + L +VS +EL DD E
Sbjct: 331 AIDAVTQGMIAPE--------YIKKQ--LESCAIMKPEVPTRALLLGNLVSKEELDDDAE 380
Query: 498 YEEILEDMRQE 508
Y +I++D++ E
Sbjct: 381 YVDIIDDVKTE 391
>gi|356536627|ref|XP_003536838.1| PREDICTED: uncharacterized protein LOC100810537 [Glycine max]
Length = 735
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 213/515 (41%), Gaps = 112/515 (21%)
Query: 44 GSRDYERESSRSREKEKEKGRDRDRDRDRDRT---------REKDRDREKSRDMDREKSR 94
G YERE+ R + ++ +DR+ R +D R++ R + KS + + R
Sbjct: 46 GRAKYERETKRKYKNGDDETQDRNTSRKQDAVKHHNMHIYERKERRVKVKSHNEELTAKR 105
Query: 95 DREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDR--------E 146
+ RE++ R ++R+ + +R + + +D R K+ D DR
Sbjct: 106 RCSRSREREDRRSPSFSPREQKRTYQDGERKELSMHSLKDSSRTKNPDIDRNRVSTNGSS 165
Query: 147 DRHKRRSQSRS--------RGRSEHRSRSRSRSR-SKSKRISGFDMAPPASAMLAAGAGA 197
H R S S + +SE +++ S S+ S K+ +G+D+ PPA A
Sbjct: 166 GHHHRHGVSTSGLGGYSPRKRKSEAAAKTPSPSKHSLEKKRAGWDL-PPAGT---NNPSA 221
Query: 198 AAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPV-----------------QAMTQQ 240
+ P +N A+ NM +V+ V P+ Q
Sbjct: 222 VVSSSFPVSNCAV---LSNMHDVVSTSSLDLALVKPLPVSFPSDVSTGKNTNIDSVQLTQ 278
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEM 300
ATR RR+Y+ LP +A+E++V F+ ++ + N + ++ +K A VE
Sbjct: 279 ATRPIRRLYLENLPASASEKAVMDCFNNLLLSARVNHIQQAQPCICCILHKDKGQALVEF 338
Query: 301 RSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAG 360
+ ++AS A++ DG + G+ VK+RRP DY
Sbjct: 339 LTADDASAALSFDGSMLFGSIVKIRRPKDY------------------------------ 368
Query: 361 GLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKG-YAFCVYQDLSV 419
++ E+ FG L+ + ET + G AF Y D SV
Sbjct: 369 -------------------IELMEIAGVFGSLKAYHF----ETKVNNGPCAFLEYVDHSV 405
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 479
T ACA LNG+K+G + LTV +A A+ + ES+ + + +L+ P++
Sbjct: 406 TIKACAGLNGMKLGGEVLTVLQAMPDASPLENAGESLSYGVPEH---AKPLLRK---PTQ 459
Query: 480 VVCLTQVVSADEL--KDDEEYEEILEDMRQEGGKF 512
V+ + V +AD + D EEIL+D+R E +F
Sbjct: 460 VLEINNVFAADTILSLSDMAIEEILDDVRLECARF 494
>gi|145547916|ref|XP_001459639.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427465|emb|CAK92242.1| unnamed protein product [Paramecium tetraurelia]
Length = 402
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 38/280 (13%)
Query: 244 HARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSV 303
HA R+Y+G LP ++ + + Q M + G PGD V+ V + +K+ FV+ RS+
Sbjct: 86 HAVRLYLGNLPDNVDKDHLHNYIRQQMESHGA-VLDPGDPVIQVQLQPGQKYCFVQFRSI 144
Query: 304 EEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLE 363
EE A+ +D I ++G P+K +R DY ++P G E
Sbjct: 145 EETEAALQIDTINYQGKPLKFKRVKDYE----------------------ISPRIEGERE 182
Query: 364 GP--------DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
P ++FV GL + +L +G L+ ++V+D + KG+AFC ++
Sbjct: 183 VPKIQPKEPAQKLFVCGLAPDTDNDALANILSEYGNLKSLNVVRDIKNV-CKGFAFCEFE 241
Query: 416 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL--LHAQQQIALQRLMLQP 473
T LN +G + L V++ A P P Q+ ++ + +Q A + + Q
Sbjct: 242 TDLETQNCVNGLNNKVIGGRLLQVKK---NAQLPTPTQDYIIDTITLGEQSAFEAKLQQI 298
Query: 474 GSVP-SKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ S VV + V ++DD EY I++D+++E K
Sbjct: 299 NQMKVSSVVVINNAVRIKNIEDDYEYNFIVKDLKKEIEKI 338
>gi|85000357|ref|XP_954897.1| snrnp splicing factor (U2AF) [Theileria annulata strain Ankara]
gi|65303043|emb|CAI75421.1| snrnp splicing factor (U2AF), putative [Theileria annulata]
Length = 486
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 143/302 (47%), Gaps = 34/302 (11%)
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
+QFG + ++ R +Y+G +PP + + + +Q + ++ G T+ PG+
Sbjct: 82 KQFGLANYTAQSGLEGIGSKAFREIYIGNIPPVGDIEILMDIINQALISVNG-TSMPGNP 140
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL-GPSQ 342
+ +I+ + +AF+E+R++EEASN M L G+ G +KV RP Y+ + + P+
Sbjct: 141 CLKGWISSDGHYAFIELRTMEEASNCMQLTGLNIMGHNIKVNRPKTYDADVFSKAPSPTV 200
Query: 343 PNPNLNLAAVGLTP--------GSAGGLEG-------PDRIFVGGLPYYFTEAQIRELLE 387
P + +L A+G+ +A + DR+ + G+P + + +LL+
Sbjct: 201 PTLDPSLLAMGVQALKSAKEQIAAASDILAAEKAKSITDRLCLVGIPKDMEQQTVVDLLQ 260
Query: 388 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL-TVRRANQGA 446
S G ++ + + KG +++ ++ D A + K G + + + QG
Sbjct: 261 SQGTIKFTHFIME------KGEMVVLFEYENLEDQKSALESLPKQGYRVIMAIDAVTQGI 314
Query: 447 NQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMR 506
P+ Q + L L +P++ + L+ +VS +EL DDEEY +I++D+R
Sbjct: 315 ISPQ----------QIKTQLANCSLMKAEIPTRALLLSNLVSKEELDDDEEYVDIIDDIR 364
Query: 507 QE 508
E
Sbjct: 365 CE 366
>gi|156086444|ref|XP_001610631.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797884|gb|EDO07063.1| conserved hypothetical protein [Babesia bovis]
Length = 400
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 46/309 (14%)
Query: 223 GQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGD 282
GQ G++ + P+ AT+ R +Y+G +PP A+ ++ F + + A+ G T+ PG+
Sbjct: 8 GQGVGSIGLDPL------ATKPYREIYIGNIPPQADVNNLLEFLNDALTAVNG-TSIPGN 60
Query: 283 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ 342
+I+ + +AFVEMR++EEASN + L GI + +++ RP YNP + T PS
Sbjct: 61 PCQKGWISADSHYAFVEMRTMEEASNCIQLSGINYMNYSLRINRPKTYNPEI-LTEAPSP 119
Query: 343 PNPNLN--LAAVGL---------TPGSAGGLEG------PDRIFVGGLPYYFTEAQIREL 385
P L+ L A+G+ +A L DR+ V + E ++
Sbjct: 120 TIPTLDPSLLALGIAGLKCASEQISAAADMLATERAKAMTDRLCVLNVT---DEPALKRE 176
Query: 386 LESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKT--LTVRRAN 443
LE+ G L+ + + + N Y+ + + +I AL G+K D L V
Sbjct: 177 LEAQGNLKYYQYITE---DNKPPLCIFEYEHIEMQNI---ALEGLKKRDVKVELAVDALE 230
Query: 444 QGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILE 503
+GA +QQI +M +P++V+ L +VS ++L+DD EY +I++
Sbjct: 231 RGAMSED--------FMKQQIESCDIM--KSQIPTRVLLLANLVSKEDLEDDAEYYDIID 280
Query: 504 DMRQEGGKF 512
D+R E ++
Sbjct: 281 DVRCECEEY 289
>gi|71027151|ref|XP_763219.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350172|gb|EAN30936.1| hypothetical protein TP03_0201 [Theileria parva]
Length = 509
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 147/319 (46%), Gaps = 45/319 (14%)
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
+QFG + ++ R +Y+G +PP + + + +Q + ++ G T+ PG+
Sbjct: 82 KQFGLANYAAQSGLEGLGSKAFREIYIGNIPPVGDIEILMDIINQALISVNG-TSMPGNP 140
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL-GPSQ 342
+ +I+ + +AF+E+R++EEASN M L G+ G +KV RP ++ + + P+
Sbjct: 141 CLKGWISSDGHYAFIELRTMEEASNCMQLTGLNIMGHNIKVNRPKTFDADVFSKAPSPTV 200
Query: 343 PNPNLNLAAVGLTP--------GSAGGLEG-------PDRIFVGGLPYYFTEAQIRELLE 387
P + +L A+G+ +A + DR+ + G+P + + + L
Sbjct: 201 PTLDPSLLAMGVQALKSAKEQIAAASDILAAEKAKPITDRLCLVGIPKDTDQQTVVDTLR 260
Query: 388 SFGPLRGFDLVKDRETGN--SKGYAFCVYQDLSVTD----IAC----------AALNGI- 430
G ++ + + E N + Y +YQ +++ + + AL +
Sbjct: 261 LHGTIKFTNFIMGIENFNYITVIYVIYIYQLMTIVEKGEMVVLFEYENLEDQKTALESLP 320
Query: 431 KMGDKT-LTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSA 489
K G + L + QG P+ Q + L L +P++V+ L+ +VS
Sbjct: 321 KQGYRVILAIDAVTQGIISPQ----------QIKTQLANCSLMRAEIPTRVLLLSNLVSK 370
Query: 490 DELKDDEEYEEILEDMRQE 508
DEL+DDEEY +I++D+R E
Sbjct: 371 DELEDDEEYVDIIDDVRCE 389
>gi|428172624|gb|EKX41532.1| hypothetical protein GUITHDRAFT_112506 [Guillardia theta CCMP2712]
Length = 514
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 24/144 (16%)
Query: 235 QAMTQQATRHARRVYVGGLP---PTANEQSVATFFSQVMAAI-------------GGNTA 278
Q+ Q T ARRVYVG LP P +E ++ FF Q M + G T
Sbjct: 128 QSANPQLTLKARRVYVGNLPQLDPPISEPALKEFFDQAMHQVQDQGAYFKAEFAQAGLTQ 187
Query: 279 GPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 338
PG V +V+I+ EK FAF+E+R+V+EA++AM LDGI F G P++V RP DY P
Sbjct: 188 SPGCCVCDVWISSEKHFAFIEVRTVQEATSAMTLDGITFYGTPLRVNRPHDYVP------ 241
Query: 339 GPSQPNPNLNLAAVGLTPGSAGGL 362
P+ + +A GL GS GG+
Sbjct: 242 -PAPDAMIMTMAQAGLM-GSGGGI 263
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 234 VQAMTQQATRHARRVYVGGLPP-TANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
+ A+ QQ T+ ARR++VG L + S+ F SQ M + PGD ++ +++ +
Sbjct: 267 LSALMQQ-TKKARRIHVGNLLVGSMTSASLKQFISQSMQQLS-LVVKPGDPCIDSFLSGD 324
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA- 351
F FVEMR+V EA+NAMAL GI G P++V RP+DY P A + Q L
Sbjct: 325 GNFGFVEMRTVAEANNAMALSGIECNGRPIRVGRPADYVPLNAELIAQCQGTGILGTPGD 384
Query: 352 VGLTPG-SAGGLEGPD 366
G+T AG L GPD
Sbjct: 385 AGVTEAVGAGMLNGPD 400
>gi|449458894|ref|XP_004147181.1| PREDICTED: uncharacterized protein LOC101213128 [Cucumis sativus]
Length = 910
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 207/529 (39%), Gaps = 125/529 (23%)
Query: 40 KPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDR--- 96
K Q+G D R S R K ++ D DR+RD+ K D K D++ + ++
Sbjct: 217 KSQNGDDDKNRVSKR-------KSQNGDDDRNRDKYIAKKHDHGKHHDLENRERKEAVVS 269
Query: 97 -----EKDREKDRHHRDRHRERSRERS--------------ERRKDRDDDDH------YR 131
E R K R R RE RS R+K+ + H +R
Sbjct: 270 LTSRYEDSRLKRRQKRSPDRESKHRRSVSLSPRSHKHSTKLARQKELPLESHVKKSGRWR 329
Query: 132 SRDYDRRKDYDRDREDRHKRRSQSRS--------RGRSEHRSRSRSRSRSKSKRISGFDM 183
S D +R D+ +++R S S S + R+E ++ S R+ ++ D+
Sbjct: 330 S-DSERTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPLRTPEEKNEVLDL 388
Query: 184 APPASAMLAAGAGAAAAGQIPGANPAIPGMFPN------MFPLVTGQQFGALPVMPVQAM 237
P L +G+ A P +NP + N F G+ + +
Sbjct: 389 PPTEKVGLFSGS---VASNFPPSNPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAMK 445
Query: 238 TQ---------QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVY 288
T+ QATR RR+Y+ LP +A+E+++ + + + G N ++
Sbjct: 446 TKVSLDLVQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCI 505
Query: 289 INHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN 348
I+ ++ A VE + E+AS A+ DG F G+ +K+RRP DY +L
Sbjct: 506 IHKDRGQALVEFLTPEDASAALLFDGSDFSGSTLKIRRPKDYIETL-------------- 551
Query: 349 LAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDL-VKDRETGNSK 407
R+++ +FG L+ + + D G
Sbjct: 552 ----------------------------------RDVVTAFGRLKAYHFEINDDLNG--- 574
Query: 408 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 467
AF Y D SV ACA LNG+K+G + L V A P P E I
Sbjct: 575 PCAFLEYVDESVVSKACAGLNGMKIGGQVLKVFPA-----VPFPLTERTGCQPCYGIPEH 629
Query: 468 -RLMLQPGSVPSKVVCLTQVVSADELK--DDEEYEEILEDMRQEGGKFA 513
+ +LQ PS V+ + V +AD L + + +E+LED+R E +F
Sbjct: 630 VKPLLQR---PSVVLKINNVFNADVLPVLSESDIDEVLEDIRFECARFG 675
>gi|145536694|ref|XP_001454069.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421813|emb|CAK86672.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 250 VGGLPPTANEQSVATFFSQVMAAIGGN-TAGPGDAVVNVYINHEKKFAFVEMRSVEEASN 308
V +P + + +F+ ++ ++ T P A+ K + +E S E
Sbjct: 100 VSNVPLNVQLKELEEYFNTLITSLDPKITERPIKAI---EYGATKSWVVLECSSKEAKRA 156
Query: 309 AMALDGIIF-EGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDR 367
+ D + F +KV +P + L L P LN + E R
Sbjct: 157 LVTQDQVQFVNNCKIKVEKPRKF---LERILNPQAKEAELN---------ADQKQEDNTR 204
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN--SKGYAFCVYQDLSVTDIACA 425
+++GGLP Y + + +L++SFG + F+LVKD + SKGY F Y+ + T A
Sbjct: 205 LYLGGLPTYLRDEDVMKLIQSFGTTKYFNLVKDTTSNTEISKGYCFFEYEKTASTAKALK 264
Query: 426 ALNGIKMGDKTLTVRRANQGANQPKPEQESVL----LHAQQQIALQRLMLQPGSVPSKVV 481
ALN +++GDK L + + G +QP S L L Q+ + Q +PSKVV
Sbjct: 265 ALNNLQIGDKKLKICKKINGRDQPSNYAGSFLASCDLLRIPQVQQMLTIPQSALIPSKVV 324
Query: 482 CLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
+ S ++L +D+ YEE++ED+R E +F
Sbjct: 325 QFLNMCSIEDLYEDDIYEELMEDIRSECIRF 355
>gi|118376950|ref|XP_001021657.1| hypothetical protein TTHERM_00151210 [Tetrahymena thermophila]
gi|89303423|gb|EAS01411.1| hypothetical protein TTHERM_00151210 [Tetrahymena thermophila
SB210]
Length = 554
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFV 298
Q+ HA RVY+G +P + + V F + MA GG PG+
Sbjct: 210 QKQYIHALRVYIGNIPDPVDVEDVCKFVFEQMANAGG-LLEPGNP--------------- 253
Query: 299 EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS 358
+RS+EE S M LDGII++G ++ RRP D+ + + ++P P L+ + +
Sbjct: 254 -LRSIEETSACMELDGIIYKGKSLRFRRPKDF--GVLQKVEGTRPVPTLDKTKLKIVQTQ 310
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
+++ + LP F+E + +LL ++G L+ F L D+ T SKG+AFC +
Sbjct: 311 VENTY--NKLQIMNLPENFSEEHVMQLLLTYGDLKSFHLAVDKITSESKGFAFCEF---- 364
Query: 419 VTD---IACA-ALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQ 462
+TD + C L+G ++ +K + V+R N Q P+ E +L Q
Sbjct: 365 ITDRSTVECLNKLSGQQILNKVINVKRCNP---QLAPQHEEPILSLDQ 409
>gi|124511860|ref|XP_001349063.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23498831|emb|CAD50908.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 1125
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 144/331 (43%), Gaps = 37/331 (11%)
Query: 214 FPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAI 273
N++ V LP + V + AR +YVG +P + Q + + + + +
Sbjct: 624 LQNLYKNVLNINDLNLPTIDVNI-----EKTARELYVGNIPQHIDIQEIVKYLNSCLLIL 678
Query: 274 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPS----D 329
+ + I + +AFVE R++++ SN M L+GI F G +++ RP +
Sbjct: 679 YNKENENENICLKACIRGDTHYAFVEFRNIQDTSNCMLLNGINFYGNNLRIGRPKTFPIE 738
Query: 330 YNPSLAATLGPSQPNPNLNLAAVGL--------------TPGSAGGLEGPDRIFVGGLPY 375
Y+ + P+ N L+ +GL G + ++ V +
Sbjct: 739 YHSLIPQATIPAIDNYYLSQGLIGLRSFIIFCKNEEKMKNDGLPVNMIKLQKLCVSNISK 798
Query: 376 YFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDK 435
++I+ELLE+FG ++ F+ ET ++ + + T+ A A + I +
Sbjct: 799 NNDTSKIKELLEAFGEIKNFEFFYGDETSDT----YISLVEYVNTENAIQA-HKILNQNT 853
Query: 436 TLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDD 495
+ ++ ++ N P +++ + + L LQ VP+KV+ L ++ + +EL D
Sbjct: 854 SYKIQFEHEIINDPHIN--NIIKNKYMKTENSILSLQ---VPTKVIVLNKIATFEELSDS 908
Query: 496 EEYEEILEDMRQEGGKFA----FCSPTFCYK 522
EY++I+ED++ E K+ P F Y+
Sbjct: 909 SEYKDIVEDIKIECDKYGKTLEVVLPVFSYR 939
>gi|159163083|pdb|1U2F|A Chain A, Solution Structure Of The First Rna-Binding Domain Of
Hu2af65
Length = 90
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
ARR+YVG +P E+++ FF+ M +GG T PG+ V+ V IN +K FAF+E RSV+
Sbjct: 1 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 59
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNP 332
E + AMA DGIIF+G +K+RRP DY P
Sbjct: 60 ETTQAMAFDGIIFQGQSLKIRRPHDYQP 87
>gi|50552688|ref|XP_503754.1| YALI0E09889p [Yarrowia lipolytica]
gi|49649623|emb|CAG79345.1| YALI0E09889p [Yarrowia lipolytica CLIB122]
Length = 601
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 27/280 (9%)
Query: 242 TRHARRVYVGGLPP-TANEQSVATFFSQVMAAIGGNTAGPGDAVVN-VYINHEKKFAFVE 299
+R ARR+ + G+P + ++ +FF+ + G G + +V+ VY + VE
Sbjct: 262 SRVARRLILSGIPADQIDTVAIKSFFTDFIE--GLELQGSKERIVDGVYKHPRLPEVLVE 319
Query: 300 MRSVEEASNAMALDG--IIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 357
S E A+ A+AL G I + G P+ +RRPS+Y + P+ ++ ++
Sbjct: 320 FFSAEMATLALALSGLGINYSGPPISIRRPSNY-------ICPTPERSEVSRRSLDEEKE 372
Query: 358 SAGGLEGPD-RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
A +E + +I V +P+ E Q+R+L SFG L F L++ + S G A Y+D
Sbjct: 373 VASVVEDSNTKIIVWDIPFNVEEDQVRQLTASFGELSAFQLIRQLPSRESAGIALVDYKD 432
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSV 476
V A + L+G +G K L V A +G Q L L+ ++ V
Sbjct: 433 PEVVKDAVSGLSGQVIGGKNLKVMLACEGPTQ---------LSCSSNNGLKGIVTVMNDV 483
Query: 477 PSK----VVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
S+ V+ L +V+ DEL DD Y EI E + E K+
Sbjct: 484 KSRPESSVIVLFNLVTLDELLDDVAYREITEQVESECLKY 523
>gi|399216014|emb|CCF72702.1| unnamed protein product [Babesia microti strain RI]
Length = 487
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 165/386 (42%), Gaps = 68/386 (17%)
Query: 158 RGRSEHRSRSRSRSR---SKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMF 214
RGR R+ RSR R S ++ FD +PP A G G G + G IP
Sbjct: 57 RGRDIDRASDRSRFRHSDSYDRKRFKFD-SPPKQAP-KEGFGGGVLGYVDG----IP--- 107
Query: 215 PNMFPLVTGQQFGALPVMPVQAMTQQA--TRHARRVYVGGLPPTANEQSVATFFSQVMAA 272
V G++ + +A TR +R++ + PP + + +F+ M A
Sbjct: 108 ------VQGKRHIIMQTCLFGIFYSEAESTRFSRQLEISNTPPNIEVEVIIEYFNMAMLA 161
Query: 273 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRR----PS 328
+GGN A+ + +++K +EMR++EE SNA+ L+G+ G + + R P
Sbjct: 162 VGGNCLPGNPAIRGKHNSNDKTSITIEMRTLEETSNALQLNGLNLMGKSLSITRVGNCPP 221
Query: 329 DYN----PSLAATLGPSQPNPNLN-LAAVGLTP-------GSAGGLEGPDRIFVGGLPYY 376
+Y P T+ PS +N L + + P GG DR+ + LP
Sbjct: 222 EYINKAPPPTVPTISPSILALGVNGLQSADIKPLLSNAITSLVGGAPKTDRLLILDLPIT 281
Query: 377 FTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALN------GI 430
+E QI+ ++E FG L+ L K+ + S G + D T++ AL I
Sbjct: 282 QSEDQIKSMVEEFGKLKYIQLFKNADD-TSAGMCLIEFVD---TNVQVEALQKMRLQYNI 337
Query: 431 KMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSAD 490
+ + LT R ++ + + +S L+ Q +P++ + + +V+
Sbjct: 338 ILAEDALTKRIIDRNLLRLQMRNQSELMKTQ--------------IPTRCIIIRNLVTTA 383
Query: 491 E--------LKDDEEYEEILEDMRQE 508
L++D EY+E++ED+R E
Sbjct: 384 SVSSVQFMILQNDREYQEVIEDIRAE 409
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 39/309 (12%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
AR V+V L + + FF +G NT V + K +VE RSVE
Sbjct: 292 ARSVFVSQLAARLTARDLGYFFED---KLGENTVMDSRIVTDRISRRSKGIGYVEFRSVE 348
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
A+AL G + G P++++ + + L P N NL P G
Sbjct: 349 LVDKAIALSGTVVMGLPIQIQ----HTEAERNRLHPGDGNLNL--------PPGVSAPHG 396
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
+++VG L + +E+ I+++ E FG L DL +D TG SKGYAF Y+ +A
Sbjct: 397 GMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMAL 456
Query: 425 AALNGIKMGDKTLTVRRANQGANQPKPEQESV-------LLHAQQQIALQRLM------- 470
++G ++ +TL V ++ + +Q+S+ L A +Q +Q+L
Sbjct: 457 EQMDGFELAGRTLRVNTVHEKGSARYTQQDSLDEAGGGNLNAASRQALMQKLARIDPTPA 516
Query: 471 -LQPGSVP-------SKVVCLTQVVSADELKDDEEYEEILEDMRQEG-GKFAFCSPTFCY 521
++P + P S+ V + + + +E + + +++ ED++ E K+
Sbjct: 517 KMEPIARPNIPQTMQSRSVLMKNMFNPEEETERDWDKDLAEDVKGECESKYGRVLAIKVE 576
Query: 522 KES-GLIYT 529
KES G IY
Sbjct: 577 KESQGEIYV 585
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 244 HARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSV 303
AR V+V L + + FF +G T V + K +VE++++
Sbjct: 101 EARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDARIVTDRLSRRSKGIGYVELKTI 157
Query: 304 EEASNAMALDGIIFEGAPVKVRRP-SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
E A+ L G + G P+KV+ ++ N + A + +LNL P G
Sbjct: 158 ELVDQAINLSGTVVMGLPIKVQHTEAERNRTHAG-------DGSLNL------PPGVSGT 204
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
GP +++VG L + TE+ I+++ E FG L DL +D TG SKGY F Y+ +
Sbjct: 205 HGPRQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAEDAKM 264
Query: 423 ACAALNGIKMGDKTLTVRRANQGANQPKPEQESV------LLHAQQQIALQRLM-LQPGS 475
A + G ++ +TL V ++ +QES+ L A +Q +Q+L ++P
Sbjct: 265 ALEQMEGFELAGRTLRVNTVHEKGTVKYTQQESLEENGGNLNAASRQALMQKLARIEPAR 324
Query: 476 VPSKVV---CLTQVVSA 489
P + V +TQ + +
Sbjct: 325 APVETVSKPVITQTLQS 341
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 38/291 (13%)
Query: 248 VYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEAS 307
+ V +P + + FF+ +++ + A P VV V + +FA + M S
Sbjct: 130 LIVSDIPRMITDIEIKEFFNILISKLRPELAEPS-PVVKVDVMTNGQFATMHMSCKLAKS 188
Query: 308 NAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGP-- 365
A+ L G+ F+ + + +P Y Q N + G L+
Sbjct: 189 FALTLRGVEFQKCKLMIEKPKQY---FFRMYMEKQQN------DDVMVDVDDGALQQMQM 239
Query: 366 DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGN---SKGYAFCVYQDLSVTDI 422
++I++GGLP Y + +R+L E+FG L+ F++ K + SKGY F Y+D ++T+
Sbjct: 240 NKIYMGGLPTYLKDIDVRKLCETFGKLKYFNVAKQQNENKEQVSKGYCFFEYEDPNITEK 299
Query: 423 ACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA----------------- 465
A ALNG+ GD+ L V R + N+ Q+ + + ++A
Sbjct: 300 AIKALNGLPCGDRKLKVSRVTKDQNKLANTQQ--IQSEKNKLAPSNNSGSFLGGSDLIRK 357
Query: 466 --LQRLMLQP--GSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
Q+L+ P S+PS+V+ L +VS ++L +D+ +++ +D+ E K
Sbjct: 358 DEFQKLLTIPEFTSLPSRVIQLLNMVSIEDLFEDDIVDDLYQDVMTECEKI 408
>gi|297801306|ref|XP_002868537.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp.
lyrata]
gi|297314373|gb|EFH44796.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp.
lyrata]
Length = 1370
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 38/262 (14%)
Query: 173 SKSKRISGFDMAPPASAMLAAGA---GAAAAGQI---PGANPAIPGMFPNM-FPLVTGQQ 225
S K+ + +D+AP +A + +G+ G AA Q + ++ + P M P T
Sbjct: 824 SSEKKSAKWDLAPAVTAAMFSGSVFSGLQAAAQTAYPTNSEASLTLLKPLMEAPFRTPSA 883
Query: 226 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 285
V VQ ++TR RR+Y + +A+E+S+ F+ M + G N + +
Sbjct: 884 REITSVDSVQLT--ESTRRMRRLYAENVSDSASEKSLIECFNSYMLSSGSNHIKGSEPCI 941
Query: 286 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG------ 339
+ IN EK A VE + +AS A++LDG F G +K+RRP Y + +G
Sbjct: 942 SCIINKEKSQALVEFLTPHDASAALSLDGCSFAGLNLKIRRPKGYVETTGVYVGYVIIHI 1001
Query: 340 -----------PSQPNPNLNLAAVGLTPGSAGGLE------------GPDRIFVGGLPYY 376
+ A+ + G E ++IF+GG P
Sbjct: 1002 QEGDEAVCYVMVTIHEAGFQTVAIFMQSGELAKKEPATNAISDNVKDSSNKIFIGGFPKS 1061
Query: 377 FTEAQIRELLESFGPLRGFDLV 398
+ + E++ FGPL+ + V
Sbjct: 1062 ISSEMLMEIVSVFGPLKAYRFV 1083
>gi|399216439|emb|CCF73127.1| unnamed protein product [Babesia microti strain RI]
Length = 424
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 144/323 (44%), Gaps = 56/323 (17%)
Query: 232 MPVQAMTQQATRHARRVYVGGLPPT-------ANEQSVATFFSQVMAAIGGNT---AGPG 281
+P + +A R RR+Y+G +P +++ + F + + + NT A P
Sbjct: 46 IPAADLDPEAERRHRRLYIGNVPAGNHNTNLGSSQSDIVAFLNGALLTVLSNTGMPATPA 105
Query: 282 DAVVNVY--INHEKKFAFVEMRSVEEASNAMALDGII-------FEGAPVKVRRPSDYNP 332
D + N E +F F+E+R+V+ + +DGI + G +K+ RPSDY P
Sbjct: 106 DTPITKCESFNSENRFCFIELRNVDVTLVCLKMDGISLVDSGINYNGNALKISRPSDYVP 165
Query: 333 ----SLAATLGPS--QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELL 386
LA + P+ QP +A ++ + +P E + EL+
Sbjct: 166 PSNNELATQMQPTIQQPPRGFTMALQVF------------KLHIQNIPTTMAEDGVLELV 213
Query: 387 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR-----R 441
+ FG ++ ++KD TG K AF ++D + A AL G ++ ++LT + +
Sbjct: 214 KEFGDVKYVYIIKD-TTGQHKNTAFVEFKDSVSLEPASKALTGKEVEGQSLTAKIVTSNQ 272
Query: 442 ANQGANQPKPEQESVLLHAQQQIALQRLMLQP------------GSVPSKVVCLTQVVSA 489
A+ A+ + H I+ ++++ P G+ S VV L +V
Sbjct: 273 ADTLASLAAGKYNLGATHLSTSIS-RKILSDPLLSIGVQSGRKIGATVSTVVQLLNIVFH 331
Query: 490 DELKDDEEYEEILEDMRQEGGKF 512
++L DD+ Y+ +LED+R+E K+
Sbjct: 332 EDLIDDDSYQSLLEDIRKEAKKY 354
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
AR V+V L + + FF +G V + K +VE R++E
Sbjct: 253 ARSVFVSQLAARLTARDLGYFFED---KLGEGAVMDSRIVTDRISRRSKGIGYVEFRTIE 309
Query: 305 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA---GG 361
A+ L G I G P++V+ ++ N ++ L PG + GG
Sbjct: 310 LVEKAIGLSGTIVMGLPIQVQHTE------------AERNRTHAGDSLHLPPGVSSHHGG 357
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
++ ++VG L + TE+ IR++ E FG L DL +D TG SKGYAF Y+
Sbjct: 358 MQ----LYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAK 413
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESV-------LLHAQQQIALQRL----- 469
+A + G ++ +TL V ++ N QES+ L A +Q +Q+L
Sbjct: 414 MALEQMEGFELAGRTLRVNTVHEKGNVRYTPQESLDDTGGGNLNAASRQALMQKLARTDQ 473
Query: 470 -------MLQPG---SVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
+++P S+ SK V L + + +E + + +E+ +D++ E
Sbjct: 474 PAARPQPIMKPNIPQSMQSKSVLLKNMFNPEEETERDWDKELADDVKNE 522
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE-KKFAFVEMRSVE 304
R ++VGGLP + + F + M + T+ G+ V+ + + + FAF+E+R+ E
Sbjct: 749 RELHVGGLPHGVSGVQLQDFLNAAMQYLKIATSA-GNPVIRIAMGPDGTNFAFIELRTEE 807
Query: 305 EASNAMA-LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLE 363
E + + + GI +K RP + A P ++V
Sbjct: 808 ETNATLGRMSGIQCGTGHLKFGRPKAHAAGATAV------APKKEESSV----------- 850
Query: 364 GPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 423
+ V LP T+ +RELL FG L+ F+L+KD +G SKG A Y D+ +A
Sbjct: 851 ----LMVMNLPDSLTDDHVRELLSPFGELKKFNLLKD-SSGKSKGTAVFEYTDMENGQLA 905
Query: 424 CAALNGIKMGDKTLTVRR--ANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVV 481
+ L+G+ +G L V+R A A KP + + Q + P+ VV
Sbjct: 906 LSGLSGLPVGKGKLMVQRVPAMMAATLLKPVKVKEVEDEQDNVE-----------PTCVV 954
Query: 482 CLTQVVSADELKDDEEYEEILEDMRQE 508
L+ +V +EL DD EY EI D+ +E
Sbjct: 955 RLSNMVEVEELADDTEYAEIKGDVVEE 981
>gi|449689952|ref|XP_004212193.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 210
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 166 RSRSRSRSKSKRISGFDMAPPASAMLAAGAGAA--AAGQIPGANPAIPGMFPNMFPLVTG 223
R S S KSKR + +D+ P + A AAG++ ANP P +
Sbjct: 43 RRSSHSVPKSKRNTLWDVPPKGYEDITPVQFKALRAAGKVEVANPVCGSAVPAV------ 96
Query: 224 QQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
+LP Q T ARR+Y+G +P +E + FF+ M PG+
Sbjct: 97 ----SLP------QGAQTTWQARRIYLGNIPFGISEDLMVDFFNAKMRE-SDIARQPGNP 145
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 332
V+ IN EK FAF+E RSVEE + AMA DGI+ +G +K+RRP DY P
Sbjct: 146 VLACQINLEKNFAFLEFRSVEETTLAMAFDGIMLQGQALKIRRPKDYQP 194
>gi|70954273|ref|XP_746191.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526725|emb|CAH88205.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 686
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 134/313 (42%), Gaps = 39/313 (12%)
Query: 222 TGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPG 281
T G L + + A A + AR +YVG +P + Q + F + + +
Sbjct: 233 TALGIGELGLSTIDA---NAEKTARELYVGNIPQNIDIQEIVKFLNTCLLILYNKENENE 289
Query: 282 DAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 341
+ I + ++AFVE RS+++ SN M L+GI F +++ RP + + P+
Sbjct: 290 SICLKACIRGDTRYAFVEFRSLQDTSNCMLLNGIYFYSNNLRIGRPKTFPAEYTKLIPPA 349
Query: 342 QPNPNLNLAAVGLTPGSAG---------------------GLEGPDRIFVGGLPYYFTEA 380
P + L+ G G + ++ V +
Sbjct: 350 TIPP---IDTYYLSQGLIGIKAFVIFHQNRDETKNEYLPVDMIKLQKLCVSNISKNNETN 406
Query: 381 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCV-YQDLSVTDIACAALNGIKMGDKTLTV 439
+I+ELLE+FG ++ F+ + E NS Y V Y ++ A LN + + +
Sbjct: 407 KIKELLEAFGEIQSFEFFEGEE--NSDTYICLVEYNNVENAIQAHKILN----QNTSYRI 460
Query: 440 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE 499
+ + N P Q L ++ + + +L +P+KVV L+++ + DEL + E+Y+
Sbjct: 461 QFEYEIVNDPTINQ----LVKKKYMQTKNAILSQ-QIPTKVVVLSKIATFDELSNPEDYK 515
Query: 500 EILEDMRQEGGKF 512
EI ED++ E K+
Sbjct: 516 EISEDIKIECEKY 528
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 43/268 (16%)
Query: 230 PVMPVQAMTQQATRH----ARRVYVGGLPPTANEQSVATFFSQ------------VMAAI 273
P++ V M + R AR V+V L + + FF V I
Sbjct: 255 PIVDVDPMNPEEPREDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRI 314
Query: 274 GGNTAGPGDAV--VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 331
+ G + +N + + +VE R+VE A+AL G + G P++++ +
Sbjct: 315 SRRSKGLLLIISRINTSLTFCLRIGYVEFRTVELVDKAIALSGTVVMGLPIQIQ----HT 370
Query: 332 PSLAATLGPSQPNPNLNLAAVGLTPG---SAGGLEGPDRIFVGGLPYYFTEAQIRELLES 388
+ L P N NL PG S GG++ ++VG L + TE+ I+++ E
Sbjct: 371 EAERNRLHPGDGNLNL-------PPGVSASHGGMQ----LYVGSLHFNLTESDIKQVFEP 419
Query: 389 FGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQ 448
FG L DL +D TG SKGYAF Y+ +A + G ++ +TL V ++
Sbjct: 420 FGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQMEGFELAGRTLRVNTVHEKGTI 479
Query: 449 PKPEQESV-------LLHAQQQIALQRL 469
+Q+S+ L A +Q +Q+L
Sbjct: 480 RYTQQDSLDEAGGGNLNAASRQALMQKL 507
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 41/290 (14%)
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEE 305
R V+V L + + FF + +G + V + K A+VE+ S++
Sbjct: 303 RSVFVSQLAARLTARDLGYFFEE---KLGEGSVRDVRIVTDRVSRRSKGIAYVELSSIDM 359
Query: 306 ASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGP 365
S A+AL G I G P+ V+ +AA+ +++ L PG G
Sbjct: 360 VSRAIALTGTIVMGLPIMVQLTESERNKVAASG-----------SSMHLPPGVTAPPPGS 408
Query: 366 DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 425
+++VG L + TE+ ++++ E FG L DL +D TG SKG+AF Y+ +A
Sbjct: 409 MQLYVGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSEDARMALQ 468
Query: 426 ALNGIKMGDKTLTVRRANQ--GANQPKPEQESV-------LLHAQQQIALQRLM-LQP-- 473
+++G + + L V ++ GA + + + +S+ L A +Q +Q+L ++P
Sbjct: 469 SMDGFDLAGRQLKVNTVHEKGGAIRYQSQSDSLDESGGGNLNAASRQALMQKLARIEPPK 528
Query: 474 ------GSVP-----SKVVCLTQVVSADELKDDEE----YEEILEDMRQE 508
S+P S+ V L + EL++ E +E+ +D++QE
Sbjct: 529 PAISPMASLPKAAMQSRSVLLRNMFKEPELEEKENGPNWAKELTDDVKQE 578
>gi|224077134|ref|XP_002305147.1| predicted protein [Populus trichocarpa]
gi|222848111|gb|EEE85658.1| predicted protein [Populus trichocarpa]
Length = 191
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 101/198 (51%), Gaps = 23/198 (11%)
Query: 47 DYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH 106
DY ++ R + R+ + DR R R R KD DR + D D +D+ D
Sbjct: 14 DYTSQTDRVSRHKTYSSRESEHDRSRTRGRGKDHDRYRGGYKDGSVRNDGRRDKFGD--- 70
Query: 107 RDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEH--R 164
DRH ERS R R+Y R +DYD DR R+ RS S S+GR ++ R
Sbjct: 71 FDRH-----ERSS-----------RGRNYHRHRDYDGDRGRRNGNRSSSYSQGRFQNRSR 114
Query: 165 SRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAA-AGQIPGANPAIPGMFPNMFPLVTG 223
SRSRSRS SKSKR SGFDMAP ML A A AGQ+P +PG+ N T
Sbjct: 115 SRSRSRSPSKSKRKSGFDMAPSEVGMLPGAAVAVNDAGQLPSLPQTMPGVVQNALQFGT- 173
Query: 224 QQFGALPVMPVQAMTQQA 241
QFG P+MP QAMTQQ
Sbjct: 174 TQFGVFPLMPAQAMTQQV 191
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 304
AR V+V L + + FF +G T V + K +VE RS++
Sbjct: 251 ARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDARIVTDRLSRRSKGIGYVEFRSID 307
Query: 305 EASNAMALDGIIFEGAPVKVRRP-SDYNPSLAATLGPSQPNPNLNLAAVGLTPG--SAGG 361
A+AL G I G P+ V+ S+ N S A ++ L PG ++G
Sbjct: 308 LVEKAIALSGTIVMGLPINVQLTESERNKSHAGD------------GSLHLPPGVTASGA 355
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
+ ++VG L + TE+ I+++ E FG L DL KD TG SKGYAF Y+
Sbjct: 356 I-----LYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDAR 410
Query: 422 IACAALNGIKMGDKTLTVRRANQGANQPKPEQESV-------LLHAQQQIALQRLM---- 470
+A + G ++ +TL V ++ + + +S+ L A +Q +Q+L
Sbjct: 411 MALEQMEGFELAGRTLRVNTVHEKGSVRYTQTDSLDDSGGANLNAASRQALMQKLARTEQ 470
Query: 471 ----------LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
+ P ++ S+ V L + + +E + +++ +D++ E
Sbjct: 471 PVVPAEPVKPIIPQAMQSRSVLLKNMFNPEEETEQNWDKDLADDVKGE 518
>gi|330801236|ref|XP_003288635.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
gi|325081308|gb|EGC34828.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
Length = 1853
Score = 79.3 bits (194), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 18/184 (9%)
Query: 7 NGEDVDNNNNNNNNNYEYGSSPQPRSADDHSD------SKPQHGSRDYERESSRSREKEK 60
+ D D++N ++++ + SS DHS+ S SRD+ R+ RE +
Sbjct: 1332 HSRDSDHHNRDSSHRKDRESS---HRGSDHSNGTASIVSNGNGSSRDHHRDKDHHRESHR 1388
Query: 61 E-KGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREK----DREKDRHHRDRHRE-RS 114
E + +R+ DR + DRD+E D D+E DR+K +REKD+H DR++E RS
Sbjct: 1389 EHRSSEREHRSDRSKEHRSDRDKEHRSDRDKEHRSDRDKEHRSEREKDQHRSDRNKEHRS 1448
Query: 115 RERSERRKDRDDDDHYRSRDYDRRKDYDRD--REDRHKRRSQSRSRGRSEHRSRSRSRSR 172
ER + + D +H RD + R + ++D RE R + + + R +HR + ++R
Sbjct: 1449 GERDKEHRSDRDKEHRSDRDKEHRSEREKDQHREARTSIGEREKDQNR-DHREKDQNRDH 1507
Query: 173 SKSK 176
+ +
Sbjct: 1508 KEKE 1511
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 35 DHSDSKPQHGSRDYERESSRSREKEKE------------KGRDRDRDRDRDRTREKDRD- 81
DHS H R+ S + + G RD RD+D RE R+
Sbjct: 1331 DHSRDSDHHNRDSSHRKDRESSHRGSDHSNGTASIVSNGNGSSRDHHRDKDHHRESHREH 1390
Query: 82 REKSRDMDREKSRDREKDREKDRHHRDRHRE-RSRERSERRKDRDDDDHYRSRDYDRRKD 140
R R+ ++S++ DR+K+ H DR +E RS E R +R+ D H R+ + R
Sbjct: 1391 RSSEREHRSDRSKEHRSDRDKE-HRSDRDKEHRSDRDKEHRSEREKDQHRSDRNKEHRSG 1449
Query: 141 YDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRIS 179
+RD+E R R + RS EHRS R + + + R S
Sbjct: 1450 -ERDKEHRSDRDKEHRSDRDKEHRSE-REKDQHREARTS 1486
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 91/140 (65%), Gaps = 16/140 (11%)
Query: 50 RESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDRE------KSRDREKDREKD 103
R S +SR K+K++ ++R++ RD+DR R +D+DR+K D+E K RDR+K+++KD
Sbjct: 1110 RSSGKSRHKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQKEKDKD 1169
Query: 104 RHHR-DRHRERSRERS-ERRKDRDDDDHYRSRDYDRRKDYDRD-REDRHKRRSQSRSRG- 159
R R DR E S+E+ ERRKDR+ D S+D DRR + DRD R++R K S+ + RG
Sbjct: 1170 RERRKDREGESSKEKDRERRKDREKDS---SKDKDRR-EKDRDGRKEREKESSKEKDRGE 1225
Query: 160 --RSEHRSRSRSRSRSKSKR 177
RS+HR + + R R K +R
Sbjct: 1226 KDRSKHREKEKDRDREKKER 1245
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 28/167 (16%)
Query: 37 SDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRD--------------RDRTREKDRDR 82
S K +H +D ++E + R+K++E+ RD+DRD+D RDR +EKD+DR
Sbjct: 1111 SSGKSRHKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQKEKDKDR 1170
Query: 83 EK--------SRDMDREKSRDREKDREKDRHHRDRHRERSRER---SERRKDRDDDDHYR 131
E+ S++ DRE+ +DREKD KD+ R++ R+ +ER S + KDR + D R
Sbjct: 1171 ERRKDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKD--R 1228
Query: 132 SRDYDRRKDYDRDREDR-HKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
S+ ++ KD DR++++R H+ +S R S + R R R K +R
Sbjct: 1229 SKHREKEKDRDREKKERSHRDNKESAERTDSGKKERHRDRDEKKRER 1275
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 43/168 (25%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRD------REKSRDMDR--------- 90
+D E ESS+ +++E+ K R++D +D+DR REKDRD +E S++ DR
Sbjct: 1174 KDREGESSKEKDRERRKDREKDSSKDKDR-REKDRDGRKEREKESSKEKDRGEKDRSKHR 1232
Query: 91 --EKSRDREKDREKDRHHRDR----------HRERSRERSERRKDRD------DDDHYRS 132
EK RDREK K+R HRD +ER R+R E++++R+ D D +
Sbjct: 1233 EKEKDRDREK---KERSHRDNKESAERTDSGKKERHRDRDEKKREREKESGSRDGDKSST 1289
Query: 133 RDYDR------RKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
+D DR ++ D+DRE R ++ S R R +HR + S R K
Sbjct: 1290 KDGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKHRDKDGSADRRK 1337
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 89/190 (46%), Gaps = 49/190 (25%)
Query: 31 RSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDR-DRDRDRDRTREKDRDREKS---- 85
R D DS R+ +R+ + REKE K +DR ++DR + R +EKDRDREK
Sbjct: 1188 RRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREKEKDRDREKKERSH 1247
Query: 86 ------------------RDMDREKSRDREK-------------DREKD-RHHRDRHRER 113
RD D EK R+REK D ++D R RHR++
Sbjct: 1248 RDNKESAERTDSGKKERHRDRD-EKKREREKESGSRDGDKSSTKDGDRDKRREEKRHRDK 1306
Query: 114 SRERSERRKDRDDDDHYRSRDYDRRKDYDRD-REDRHKRRSQSRSRGRSEHRSRSRSRSR 172
R ERRK+++ +D D +RRK D+D DR KR + R EH+ + R
Sbjct: 1307 DR---ERRKEKESNDS----DRERRKHRDKDGSADRRKREKSGERKHRKEHKE---EKGR 1356
Query: 173 SKSKRISGFD 182
SKS+ +G D
Sbjct: 1357 SKSEHKNGQD 1366
>gi|339006472|ref|ZP_08639047.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
gi|338775681|gb|EGP35209.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
Length = 1272
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 33 ADDHSDSKPQHGS----------RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDR 82
D +SKP G+ +D ++E + R+KE EK RD++ ++DRD+ EKDRD+
Sbjct: 870 TDKEKESKPDLGTDGEAKDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDK 929
Query: 83 EKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRD-----DDDHYRSRDYDR 137
E +D DRE +DR+K+ EKD RD+ E+ +++ E KDRD D D +D D+
Sbjct: 930 EPEKDRDREPEKDRDKEPEKD---RDKEPEKDKDK-EPEKDRDKEPEKDRDKEPGKDRDK 985
Query: 138 RKDYDRDRE---DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
DRD+E DR K + R + + R + R + K
Sbjct: 986 EPGKDRDKEPGKDRDKEPEKDRDKEPGKDRDKEPERDKEK 1025
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 42 QHGSRDYERESSRSREKEKEKGRDRDRDRD-RDRTREKDRDREKS--RDMDREKSRDREK 98
Q G ++ + +KEKE D D + +D+ EKDRD+E +D D+E +DR+K
Sbjct: 856 QEGVKELKIAVKTVTDKEKESKPDLGTDGEAKDKEPEKDRDKE--PEKDRDKEPEKDRDK 913
Query: 99 DREKDR-----HHRDRHRERSRERSERRKDRD-----DDDHYRSRDYDRRKDYDRDRE-- 146
+ EKDR RD+ E+ R+R E KDRD D D +D D+ + DRD+E
Sbjct: 914 EPEKDRDKEPEKDRDKEPEKDRDR-EPEKDRDKEPEKDRDKEPEKDKDKEPEKDRDKEPE 972
Query: 147 -DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
DR K + R + + R + + R K
Sbjct: 973 KDRDKEPGKDRDKEPGKDRDKEPGKDRDK 1001
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 46 RDYERESSRSREKE------KEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDRE 97
+D ++E + R+KE KE G+DRD++ ++DR +E +DR+K + D+EK D+E
Sbjct: 973 KDRDKEPGKDRDKEPGKDRDKEPGKDRDKEPEKDRDKEPGKDRDKEPERDKEKEPDKE 1030
>gi|323451698|gb|EGB07574.1| hypothetical protein AURANDRAFT_64670 [Aureococcus anophagefferens]
Length = 214
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%)
Query: 235 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 294
Q + ATR RR+YVG LP T + + + F ++ + A G AG + VV+ +++ +KK
Sbjct: 43 QMPSNPATRKERRLYVGNLPQTFDSEQLRIFLNEALRACGAIPAGVDEVVVSSWVSPDKK 102
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
FAFVE+ +VE A+ ++ L GI G +K+ P++Y GP+ P
Sbjct: 103 FAFVELSTVEAATTSLGLSGITCMGCQLKICHPNNYVVGALPGTGPTLP 151
>gi|30685698|ref|NP_850209.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330253740|gb|AEC08834.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 173 SKSKRISGFDMAPPASAML---AAGAGAAAAGQIPGANPAIPGMFPNMFP--LVTGQQFG 227
S K+ + + +A +A + + +G AA Q A P I + +V F
Sbjct: 798 SSEKKSAKWGLAATVTAGMFSDSVFSGLQAATQT--AYPTISEASLTLLKPLMVMDAPFR 855
Query: 228 ALPVMPVQAM----TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA 283
P + ++TR RR+Y +P +A+E+S+ F+ M + G N +
Sbjct: 856 TPPARQTTSFDSVQLTESTRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEP 915
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 338
++ IN EK A VE + ++AS A++LDG F G+ +K+RRP DY + +++
Sbjct: 916 CISCIINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDYVRTTVSSI 970
>gi|147852616|emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]
Length = 544
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 172 RSKSKRISGFDMAPPASAMLAAGAGAAAAG----QIPGANPAIPGMFPNMFPLVTGQQFG 227
RS K+ +G+D+ P + + AG+ ++ + +P P P+
Sbjct: 350 RSPEKKNAGWDLPPSRTDGMNAGSVLSSLQVLKPTVSSNADELPSAVPVAVPVTATTAKP 409
Query: 228 ALPVMPVQAMTQ------------QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGG 275
LP + A+++ QATR RR+YV LP +++E+++ + + + G
Sbjct: 410 PLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGI 469
Query: 276 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY 330
N ++ I+ EK A VE + E+AS A++ DGI F G+ +K+RRP D+
Sbjct: 470 NHVQGTPPCISCIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDF 524
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 92/138 (66%), Gaps = 10/138 (7%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDRE----KSRDMDREKSRDREKDRE 101
++ E++ ++++KE EKGR++D+D++ ++ REKDRD+E + +D D+E + REKD++
Sbjct: 772 KELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQD 831
Query: 102 KDRHH-RDRHRERSRERSERRKDRDDD-DHYRSRDYDRRKDYDRDR---EDRHKRRSQSR 156
K+ +++ R++ RE+ +R K RD D D R +D D+ ++ DRD+ +DR K R + R
Sbjct: 832 KELEKGQEKDRDKVREK-DRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDR 890
Query: 157 SRGRSEHRSRSRSRSRSK 174
+GR + R + + ++R K
Sbjct: 891 DKGREKDRDKEQVKTREK 908
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 26/158 (16%)
Query: 46 RDYERESSRSRE--KEKEKGRDRDRDR--------DRDRTREKDRDREKSRDMDREKSRD 95
RD E E +R ++ KE EKGR++D+D+ DRD+ REKDRD+ + +D D+ + +D
Sbjct: 806 RDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKD 865
Query: 96 REKDREKDRHH-RDRHRERSRERSE---RRKDRDDDDHYRSRDYD----RRKDYDRDRED 147
R+K REKDR R++ RE+ RER R KDR D + ++R+ D R KD D++RE
Sbjct: 866 RDKVREKDRDKLREKDREKIRERDRDKGREKDR-DKEQVKTREKDQEKERLKDRDKEREK 924
Query: 148 -------RHKRRSQSRSRGRSEHRSRSRSRSRSKSKRI 178
R + + + R++ +E + RSR S R+
Sbjct: 925 VRDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRV 962
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 28/158 (17%)
Query: 40 KPQHGSRDYE----RESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRD 95
K Q RD E R+ RS++ EK + +D+D++ ++DR + +D++ EK R+ D++K +
Sbjct: 740 KEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDK--E 797
Query: 96 REKDREKDRHHRDRHRERSRERSE-------RRKDRD---------DDDHYRSRDYDRRK 139
EK REKD RD+ E++RE+ + R KD+D D D R +D D+ +
Sbjct: 798 LEKGREKD---RDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVR 854
Query: 140 DYDRDR---EDRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
D DRD+ +DR K R + R + R + R + R R R K
Sbjct: 855 DKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDK 892
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 28/157 (17%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR- 104
+D E++ + R+KE EKGR ++R +DR + +EK RD+E+ + D+++S+D EK REKD+
Sbjct: 712 KDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQD 771
Query: 105 --------HHRDRHRERSRERSE-------RRKDRDDD-DHYRSRDYD------RRKDYD 142
++D+ E+ RE+ + R KDRD + + R +D D R KD D
Sbjct: 772 KELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQD 831
Query: 143 RDRE-----DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
++ E DR K R + R + R + R + R + R K
Sbjct: 832 KELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDK 868
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 21/162 (12%)
Query: 27 SPQPRSADDHSDSKPQHGSRDYERESSR--------SREKEKEKGRDRDRDRDRDRTREK 78
S + R +D S+ +H +RD E+E + REKE EKGRD++R +D+++ +EK
Sbjct: 662 SSKGRRSDTSKSSRVEH-NRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEK 720
Query: 79 DRDREKSRDMDREKSRDREKDREKDRHH-----RDRHRERSRERSERRKDRDDDDHYRSR 133
RD+E + +E+ +DR K++EK R RD+ R + E+ R KD+D +
Sbjct: 721 GRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKC-REKDQD-----KEL 774
Query: 134 DYDRRKDYDRDRED-RHKRRSQSRSRGRSEHRSRSRSRSRSK 174
+ DR K+ D++ E R K + + +GR + R + ++R K
Sbjct: 775 EKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREK 816
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 92/138 (66%), Gaps = 10/138 (7%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDRE----KSRDMDREKSRDREKDRE 101
++ E++ ++++KE EKGR++D+D++ ++ REKDRD+E + +D D+E + REKD++
Sbjct: 772 KELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQD 831
Query: 102 KDRHH-RDRHRERSRERSERRKDRDDD-DHYRSRDYDRRKDYDRDR---EDRHKRRSQSR 156
K+ +++ R++ RE+ +R K RD D D R +D D+ ++ DRD+ +DR K R + R
Sbjct: 832 KELEKGQEKDRDKVREK-DRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDR 890
Query: 157 SRGRSEHRSRSRSRSRSK 174
+GR + R + + ++R K
Sbjct: 891 DKGREKDRDKEQVKTREK 908
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 26/158 (16%)
Query: 46 RDYERESSRSRE--KEKEKGRDRDRDR--------DRDRTREKDRDREKSRDMDREKSRD 95
RD E E +R ++ KE EKGR++D+D+ DRD+ REKDRD+ + +D D+ + +D
Sbjct: 806 RDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKD 865
Query: 96 REKDREKDRHH-RDRHRERSRERSE---RRKDRDDDDHYRSRDYD----RRKDYDRDRED 147
R+K REKDR R++ RE+ RER R KDR D + ++R+ D R KD D++RE
Sbjct: 866 RDKVREKDRDKLREKDREKIRERDRDKGREKDR-DKEQVKTREKDQEKERLKDRDKEREK 924
Query: 148 -------RHKRRSQSRSRGRSEHRSRSRSRSRSKSKRI 178
R + + + R++ +E + RSR S R+
Sbjct: 925 VRDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRV 962
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 28/158 (17%)
Query: 40 KPQHGSRDYE----RESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRD 95
K Q RD E R+ RS++ EK + +D+D++ ++DR + +D++ EK R+ D++K +
Sbjct: 740 KEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDK--E 797
Query: 96 REKDREKDRHHRDRHRERSRERSE-------RRKDRD---------DDDHYRSRDYDRRK 139
EK REKD RD+ E++RE+ + R KD+D D D R +D D+ +
Sbjct: 798 LEKGREKD---RDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVR 854
Query: 140 DYDRDR---EDRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
D DRD+ +DR K R + R + R + R + R R R K
Sbjct: 855 DKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDK 892
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 28/157 (17%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR- 104
+D E++ + R+KE EKGR ++R +DR + +EK RD+E+ + D+++S+D EK REKD+
Sbjct: 712 KDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQD 771
Query: 105 --------HHRDRHRERSRERSE-------RRKDRDDD-DHYRSRDYD------RRKDYD 142
++D+ E+ RE+ + R KDRD + + R +D D R KD D
Sbjct: 772 KELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQD 831
Query: 143 RDRE-----DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
++ E DR K R + R + R + R + R + R K
Sbjct: 832 KELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDK 868
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 21/162 (12%)
Query: 27 SPQPRSADDHSDSKPQHGSRDYERESSR--------SREKEKEKGRDRDRDRDRDRTREK 78
S + R +D S+ +H +RD E+E + REKE EKGRD++R +D+++ +EK
Sbjct: 662 SSKGRRSDTSKSSRVEH-NRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEK 720
Query: 79 DRDREKSRDMDREKSRDREKDREKDRHH-----RDRHRERSRERSERRKDRDDDDHYRSR 133
RD+E + +E+ +DR K++EK R RD+ R + E+ R KD+D +
Sbjct: 721 GRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKC-REKDQD-----KEL 774
Query: 134 DYDRRKDYDRDRED-RHKRRSQSRSRGRSEHRSRSRSRSRSK 174
+ DR K+ D++ E R K + + +GR + R + ++R K
Sbjct: 775 EKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREK 816
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEE 305
R V+V L ++ ++ FF Q + + + K +VE R ++
Sbjct: 306 RSVFVSQLSARVGDRELSQFFEQQAGKVRD-----ARVITDRISRRSKGVGYVEFRELDS 360
Query: 306 ASNAMALDGIIFEGAPVKVRRP---------SDYNPS-LAATLGPSQPNPNLNLAAVGLT 355
A+AL G G PV V+ ++ P+ +AA L P P + + V
Sbjct: 361 VQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVAPPPPVQRSYVAPK 420
Query: 356 PGSAGGLEGPD---RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
P G P+ R++VG L + T+ +R++ + FG + DL +D+ TG SKGYAF
Sbjct: 421 P-RGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFV 479
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTV 439
++++ A +NG ++ + L V
Sbjct: 480 QFKNMHDAKNAMEKMNGFQLAGRALRV 506
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 80/200 (40%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 257 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 307
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
E + A+ L G G P+ V+ L + P QP +
Sbjct: 308 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAH------------- 354
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 355 ---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADD 411
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 412 AKKALEQLNGFELAGRPMKV 431
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 80/200 (40%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 268 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 318
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
E + A+ L G G P+ V+ L + P QP +
Sbjct: 319 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKLHT------------ 366
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 367 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADD 422
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 423 AKKALEQLNGFELAGRPMKV 442
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 234 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLILCNKTKRFKGIAYIE 284
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN-LNLAAVGLTPGS 358
E + A+ L G G P+ V+ +Q N L AA P S
Sbjct: 285 FEDPESVALALGLSGQRLLGVPIMVQH--------------TQAEKNRLQNAAPAFQPKS 330
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 331 H---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNAD 387
Query: 419 VTDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 388 DAKKALEQLNGFELAGRLMKV 408
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
PV+ ++ + R AR V+V L + + FFS V G V + N
Sbjct: 152 PVEELSPE-ERDARTVFVMQLSQRIRARDLEEFFSSV---------GKVRDVRLIVCNKT 201
Query: 293 KKF---AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
++F A++E + E + A+ L G G P+ V+ + + +G S PN
Sbjct: 202 RRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQ----HTQAEKNRMGNSMPN----- 252
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
L P + + GP R++VG L + TE +R + E FG + L+ D ETG SKGY
Sbjct: 253 ----LMPKN---MTGPMRLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGY 305
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
F +++ A LNG ++ + + V
Sbjct: 306 GFIAFRNCEDAKKALEQLNGFELAGRPMKV 335
>gi|403364994|gb|EJY82272.1| Snrnp splicing factor (U2AF), putative [Oxytricha trifallax]
Length = 411
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 26/223 (11%)
Query: 148 RHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISG-----FDMAPPASAMLAAGAGAAAAGQ 202
R K R ++ +RGR R + R R +K+ G FD +PP L G AAAA
Sbjct: 49 REKSRDRNGNRGRDREREKDRDRGGRDNKKGGGRDDFRFD-SPPKDHELTKGIMAAAA-S 106
Query: 203 IPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQ-QATRHARRVYVGGLPPTANEQS 261
I G G N ++ + +M+ Q + R++YVG LPP ++
Sbjct: 107 IGG------GTIANAQSILQ----------SIHSMSMAQTAKIDRKLYVGNLPPGITQRM 150
Query: 262 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 321
+ ++ M ++ PG+ VV+ +I+ + +AFVE R+ EEA++ L G+ +
Sbjct: 151 LIDVVNEAMLSLN-VIEEPGNPVVSAWISSDSHYAFVEFRTAEEANHGFNLQGMNIQNNE 209
Query: 322 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG 364
+K+ RP Y+ ++ A +G +N+ + G++G
Sbjct: 210 IKIGRPKAYSGTMNA-IGLMASAGGMNVQGGSFANAALMGMKG 251
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 230 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 280
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN-LNLAAVGLTPGS 358
E + A+ L G G P+ V+ +Q N L AA P S
Sbjct: 281 FEDPESVALALGLSGQRLLGVPIMVQH--------------TQAEKNRLQNAAPAFQPKS 326
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 327 H---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNAD 383
Query: 419 VTDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 384 DAKKALEQLNGFELAGRLMKV 404
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 233 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 283
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN-LNLAAVGLTPGS 358
E + A+ L G G P+ V+ +Q N L AA P S
Sbjct: 284 FEDPESVALALGLSGQRLLGVPIMVQH--------------TQAEKNRLQNAAPAFQPKS 329
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 330 H---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNAD 386
Query: 419 VTDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 387 DAKKALEQLNGFELAGRLMKV 407
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 232 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 291
+P +M R AR V+ L T + + FFS V G V + N
Sbjct: 126 VPPASMLTPEERDARTVFCMQLSKTIRARDLEEFFSSV---------GKVRDVRMITCNK 176
Query: 292 EKKF---AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN 348
++F A++E + E AM L+G G P+ V+ P+ A + PN+
Sbjct: 177 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGVPIVVQ------PTQAEKNRMANSMPNM- 229
Query: 349 LAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKG 408
V T GP +++VG L Y TE +R + E FG + L+ D ETG SKG
Sbjct: 230 ---VQRTH------YGPMKLYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKG 280
Query: 409 YAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
Y F Y++ A LNG ++ + + V
Sbjct: 281 YGFLTYRNAEDAKKALEHLNGFEIAGRPMKV 311
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 252 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRMITCNKTKRFKGIAYIE 302
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN-LNLAAVGLTPGS 358
E S A+ L G G P+ V+ +Q N L AA P S
Sbjct: 303 FEDPESVSLALGLSGQRLLGVPIMVQH--------------TQAEKNRLQNAAPAFQPKS 348
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 349 H---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNAD 405
Query: 419 VTDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 406 DAKKALEQLNGFELAGRPMKV 426
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 234 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 284
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN-LNLAAVGLTPGS 358
E + A+ L G G P+ V+ +Q N L AA P S
Sbjct: 285 FDDPESVALALGLSGQRLLGVPIMVQH--------------TQAEKNRLQNAAPAFQPKS 330
Query: 359 AGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLS 418
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 331 H---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNAD 387
Query: 419 VTDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 388 DAKKALEQLNGFELAGRLMKV 408
>gi|410904251|ref|XP_003965605.1| PREDICTED: nipped-B-like protein B-like [Takifugu rubripes]
Length = 2756
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 45/199 (22%)
Query: 21 NYEYGSSPQPRSADDHSDSKP--QHG---SRDYERESSRSREKE--------KEKGRDRD 67
N+E+ S QP + S S+P +HG SRD ++ + RE + + K R +
Sbjct: 601 NHEHSQSSQPEAQKPTSKSEPHVKHGEDKSRDRNKDKDKDREVDINMEDARGRCKNRQSN 660
Query: 68 RDRDRDRTREKDRDREKSRDMDREKSRDREKDRE--KDRHH-RDRHRERSRERS-----E 119
+DRDR+ T+ +DRD+ +++ DRE RDR+KDR+ KDR+ RD++++R R +
Sbjct: 661 KDRDRENTKGEDRDKVRNKKKDREMDRDRQKDRDETKDRNKDRDKNKDRDESRDGNKVRD 720
Query: 120 RRKDRD-DDDHYRSRDYDRRKDYDRDRE---------------------DRHKRRSQSRS 157
+ KDRD D D SR DR KD DR++E +R+K S+ ++
Sbjct: 721 KNKDRDVDKDGEESR--DRHKDKDRNKETGVGANKNKERDKNKDRDVGPNRNKELSKDKN 778
Query: 158 RGRSEHRSRSRSRSRSKSK 176
+ R E + R++ + R+K+K
Sbjct: 779 KDRGESKERNKEKERNKAK 797
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 90/137 (65%), Gaps = 14/137 (10%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTRE--KDRDREKSRDMDR--EKSRDREKDRE 101
R+ +R+ + R++ K++ +DRD+++DRD +R+ K RD+ K RD+D+ E+SRDR KD++
Sbjct: 683 REMDRDRQKDRDETKDRNKDRDKNKDRDESRDGNKVRDKNKDRDVDKDGEESRDRHKDKD 742
Query: 102 KDRHH---RDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDR-DREDRHKRRSQSRS 157
+++ ++++ER ++ KDRD + R+++ + K+ DR + ++R+K + ++++
Sbjct: 743 RNKETGVGANKNKER-----DKNKDRDVGPN-RNKELSKDKNKDRGESKERNKEKERNKA 796
Query: 158 RGRSEHRSRSRSRSRSK 174
+ + E R +SR+K
Sbjct: 797 KAKDEDGERDVGKSRTK 813
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 42/177 (23%)
Query: 34 DDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDR-------DRDRDRTREKDRDREKSR 86
D HSDS H D E S+S + E +K + D+ RDR ++KD+DRE
Sbjct: 589 DKHSDS---HHREDMNHEHSQSSQPEAQKPTSKSEPHVKHGEDKSRDRNKDKDKDREVDI 645
Query: 87 DM------------------------DREKSRDREKDREKDR---HHRDRHRERSRERSE 119
+M DR+K R+++KDRE DR RD ++R+++R +
Sbjct: 646 NMEDARGRCKNRQSNKDRDRENTKGEDRDKVRNKKKDREMDRDRQKDRDETKDRNKDR-D 704
Query: 120 RRKDRDDD-DHYRSRDYDRRKDYDRDRE---DRHKRRSQSRSRGRSEHRSRSRSRSR 172
+ KDRD+ D + RD ++ +D D+D E DRHK + +++ G ++++ R +++
Sbjct: 705 KNKDRDESRDGNKVRDKNKDRDVDKDGEESRDRHKDKDRNKETGVGANKNKERDKNK 761
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 22/159 (13%)
Query: 35 DHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRD------RDRTREKDRDREKSRDM 88
D ++K ++ RD ++ SR+ K + +++DRD D RDR ++KDR++E
Sbjct: 692 DRDETKDRNKDRDKNKDRDESRDGNKVRDKNKDRDVDKDGEESRDRHKDKDRNKETGVGA 751
Query: 89 DREKSRDREKDRE----------KDRHH-RDRHRERSRERSERRKDRDDDDHYRSRDYDR 137
++ K RD+ KDR+ KD++ R +ER++E+ + D+D R R
Sbjct: 752 NKNKERDKNKDRDVGPNRNKELSKDKNKDRGESKERNKEKERNKAKAKDEDGERDVGKSR 811
Query: 138 RKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSK 176
KD +RD RS+ R + R ++R R R+R K K
Sbjct: 812 TKDRERD-----AMRSEDRVQVRPVDKNRDRERNREKDK 845
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 35 DHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTRE------KDRDREKSRDM 88
D +S+ +H +D +E+ K KE+ +++DRD +R +E KDR K R+
Sbjct: 730 DGEESRDRHKDKDRNKETGVGANKNKERDKNKDRDVGPNRNKELSKDKNKDRGESKERNK 789
Query: 89 DREKSRDREKDREKDR---HHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDR 145
++E+++ + KD + +R R + RER RSE D + R D+ +D +R+R
Sbjct: 790 EKERNKAKAKDEDGERDVGKSRTKDRERDAMRSE--------DRVQVRPVDKNRDRERNR 841
Query: 146 EDRHKRRSQS 155
E +RR S
Sbjct: 842 EKDKERRQHS 851
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 13 NNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREK----EKEKGRDRDR 68
N + N + + G + + D + + + R+ E+E ++++ K E++ G+ R +
Sbjct: 754 NKERDKNKDRDVGPNRNKELSKDKNKDRGESKERNKEKERNKAKAKDEDGERDVGKSRTK 813
Query: 69 DRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDD 128
DR+RD R +DR + + D +R++ R+REKD+E+ +H + R + + + D
Sbjct: 814 DRERDAMRSEDRVQVRPVDKNRDRERNREKDKERRQHSSQENCSRPPPEQQGKPESAADK 873
Query: 129 HYRSR 133
H R R
Sbjct: 874 HVRIR 878
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 233 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 292
PV+ ++ + R AR V+V L + + FFS V G V + N
Sbjct: 131 PVEELSPE-ERDARTVFVMQLSQRIRARDLEEFFSSV---------GKVRDVRLIVCNKT 180
Query: 293 KKF---AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNL 349
++F A++E + E + A+ L G G P+ V+ + + +G S PN
Sbjct: 181 RRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQ----HTQAEKNRMGNSMPN----- 231
Query: 350 AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
L P + + GP R++VG L + TE +R + E FG + L+ D ETG SKGY
Sbjct: 232 ----LMPKN---MTGPMRLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGY 284
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
F +++ A LNG ++ + + V
Sbjct: 285 GFIAFRNCEDAKKALEQLNGFELAGRPMKV 314
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+F+GG PY TE I + +G + +LV+D++TG SKG+ F Y+D T +A
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 428 NGIKMGDKTLTV 439
NGIK+ +T+ V
Sbjct: 98 NGIKIKGRTIRV 109
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 56 REKEKEKGRDRD--RDRDRDRTREKDRDREKSRDMDREKSRDREKDREKD-RHHRDRHRE 112
+E+E+++GR RD R R+RD R++D ++++ R+ D + RD E+ RE+D RD R+
Sbjct: 265 KERERDRGRQRDGERQRERDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQRDGERD 324
Query: 113 RSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSR 172
R RER R+ D D + RD R++D +RD+E + R GR R R R R
Sbjct: 325 RERERDGGRQRDGDRDREQERDGGRQRDVERDQE-------RERDGGRQRDGERDRERER 377
Query: 173 SKSKRISGF 181
++ G
Sbjct: 378 DGGRQRDGV 386
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 17/109 (15%)
Query: 44 GSRDYERESSRSREKEKEKGRDRD----RDRDRDRTREKDRDREKSRDMDREKSRD--RE 97
G +D ERE R+++ E+ R+RD RD +RDR RE+D R++ D DRE+ RD R+
Sbjct: 291 GEKDRERERDGGRQRDGERQRERDGGRQRDGERDRERERDGGRQRDGDRDREQERDGGRQ 350
Query: 98 KDREKDRH-HRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDR 145
+D E+D+ RD R+R ER D R RD R++D RDR
Sbjct: 351 RDVERDQERERDGGRQRDGER----------DRERERDGGRQRDGVRDR 389
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 15/111 (13%)
Query: 49 ERESSRSREKEKEKGRDRDRDRDRDRTREKDRDRE----KSRDMDREKSRD--REKDREK 102
ERE R R+++ E+ R+RD R RD EKDR+RE + RD +R++ RD R++D E+
Sbjct: 266 ERERDRGRQRDGERQRERDGGRQRDG--EKDRERERDGGRQRDGERQRERDGGRQRDGER 323
Query: 103 DRH-------HRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
DR RD R+R +ER R+ + D R RD R++D +RDRE
Sbjct: 324 DRERERDGGRQRDGDRDREQERDGGRQRDVERDQERERDGGRQRDGERDRE 374
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+F+GG PY TE I + +G + +LV+D++TG SKG+ F Y+D T +A
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 428 NGIKMGDKTLTV 439
NGIK+ +T+ V
Sbjct: 98 NGIKIKGRTIRV 109
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 64 RDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH-HRDRHRERSRERSERRK 122
R+RDR+ +RD +E++RDR + RD R+ RD EKDRE++R R R ER RER R+
Sbjct: 253 RERDREGERDGDKERERDRGRQRDGGRQ--RDGEKDRERERDGGRQRDGERQRERDGGRQ 310
Query: 123 DRDDDDHYRSRDYDRRKDYDRDRE 146
+ D R RD R++D DRDRE
Sbjct: 311 RDGERDRERERDGGRQRDGDRDRE 334
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 31 RSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTRE--KDRDREKSRDM 88
R A+ + + G RD ++E R R ++++ GR RD ++DR+R R+ + RD E+ R+
Sbjct: 246 RHAETQQRERDREGERDGDKERERDRGRQRDGGRQRDGEKDRERERDGGRQRDGERQRER 305
Query: 89 DREKSRDREKDREKDR---HHRDRHRERSRER 117
D + RD E+DRE++R RD R+R +ER
Sbjct: 306 DGGRQRDGERDRERERDGGRQRDGDRDREQER 337
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 78/200 (39%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 236 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 286
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
E + A+ L G G P+ V+ L QP +
Sbjct: 287 FDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSH------------- 333
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 334 ---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADD 390
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 391 AKKALEQLNGFELAGRLMKV 410
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 30/203 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 188 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 241
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ NL + G A G+
Sbjct: 242 AMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNAS---GGAAGV 284
Query: 363 EGP----DR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
GP DR ++VG L + TE+Q+RE+ E FGP+ L D ETG+ KG+ F + L
Sbjct: 285 TGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHL 344
Query: 418 SVTDIACAALNG-IKMGDKTLTV 439
A +LNG +++ +T+ V
Sbjct: 345 EHAK-AAQSLNGKLEIAGRTIKV 366
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 34/248 (13%)
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEE 305
R V+V L ++ ++ FF Q + + + K +VE R ++
Sbjct: 306 RSVFVSQLSARVGDRELSQFFEQQAGKVRD-----ARVITDRISRRSKGVGYVEFRELDS 360
Query: 306 ASNAMALDGIIFEGAPVKVRRP---------SDYNPS-LAATLGPSQPNPNLNLAAVGLT 355
A+AL G G PV V+ ++ P+ +AA L P P + + V
Sbjct: 361 VQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVPPAPPVQRSYVAPK 420
Query: 356 PGSAGGLEGPD---RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF- 411
P G P+ R++VG L + T+ +R++ + FG + DL +D+ TG SKGYAF
Sbjct: 421 P-RGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFT 479
Query: 412 ---CV---YQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 465
CV ++++ A +NG ++ + L V + K + + LL+A
Sbjct: 480 LLTCVNIRFKNMHDAKNAMEKMNGFQLAGRALRV--------EIKAQPPAALLNATAPGV 531
Query: 466 LQRLMLQP 473
+ +++ P
Sbjct: 532 INPVIVTP 539
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 22/208 (10%)
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA--VVNVYINHEKKFAFVEMRSV 303
R V+V L ++ + FF Q + DA + + K +VE R +
Sbjct: 324 RSVFVSQLSARVGDRELFQFFEQQAGKVR-------DARLITDRISRRSKGVGYVEFREL 376
Query: 304 EEASNAMALDGIIFEGAPVKVR-RPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
E A+AL G G PV V+ ++ N A P+ P P A
Sbjct: 377 ESVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVP-PGFVATAPPPPVPRPYVT 435
Query: 363 E-----GPD------RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
GP+ R++VG L + T+ IR++ + FG + DL +D+ TG SKGYAF
Sbjct: 436 PKARGPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAF 495
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
++++ A +NG ++ + L V
Sbjct: 496 VQFKNMHDAKNAMEKMNGFQLAGRALRV 523
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 78/200 (39%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 248 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 298
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
E + A+ L G G P+ V+ L QP +
Sbjct: 299 FDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSH------------- 345
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
GP R++VG L + TE +R + E FG + L+ D ETG SKGY F Y +
Sbjct: 346 ---TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADD 402
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 403 AKKALEQLNGFELAGRLMKV 422
>gi|294878000|ref|XP_002768233.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239870430|gb|EER00951.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 638
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 184/438 (42%), Gaps = 65/438 (14%)
Query: 90 REKSRDR-EKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDR 148
RE S R ++D +D HR R+ + + +RK+ DD R R+ R+ R
Sbjct: 48 REDSNARSQRDNPRDEPHRSRNDDPEDSPTRKRKEDTGDDGDRKSRERSRRRSPIRRDRR 107
Query: 149 HKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANP 208
+ R + SR SE K K+ FD P A G+G + G
Sbjct: 108 PRDRRKRWSRSPSE-----------KQKKPFKFDSPPKELAAQLDGSGTSLLG------- 149
Query: 209 AIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQ 268
+P + + + F A + + + AR +Y+G +PP + + +
Sbjct: 150 -LPQTVVSSSSTIK-EAFNA-------TLAAERQKIARELYIGQIPPGISAAHLIDVLND 200
Query: 269 VMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA-LDGIIFE--GAPVKVR 325
+ +G N A PG +V+ ++ + FAFVE R+ EEAS A+ L+G + G +KV
Sbjct: 201 SLMNMGAN-AMPGRPIVHGWLGGDGLFAFVEFRTAEEASIALERLNGHQLKSYGVSIKVG 259
Query: 326 RPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA------GGLEGPD------RIFVGGL 373
RP Y +GP+ P ++N G S+ GG+ + R+ + G
Sbjct: 260 RPKGY-------MGPA-PEDSVNAYTAGGNTASSSSSAIPGGISAAEVASDTSRLCLIGF 311
Query: 374 PYYFTEAQIRELLESF--GPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIK 431
P +E I+ L S G +R +++K T N + V++ +++ D G
Sbjct: 312 PLKASEHSIKRALRSAAKGEIRHLEILK--HTWNDEQIVLAVFECVNIEDEHRLKKKG-- 367
Query: 432 MGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVV-SAD 490
+ ++ PK ++ I + + L+ VPS+V+ +T S +
Sbjct: 368 ----EVEIQGVKARIINPKDAIVKGYMNFDGDIMKKGMGLE--VVPSRVLVMTNFAGSVE 421
Query: 491 ELKDDEEYEEILEDMRQE 508
EL DD Y ++++D++ E
Sbjct: 422 ELLDDINYSDLMDDIKVE 439
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 144 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 194
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 195 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 239
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 240 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 298
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 299 AKKALEQLNGFELAGRPMKV 318
>gi|410897321|ref|XP_003962147.1| PREDICTED: LOW QUALITY PROTEIN: TRAF3-interacting protein 1-like
[Takifugu rubripes]
Length = 649
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 29 QPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDM 88
Q R + H+ K RD E++ +RSREK++E+ +RD+D++RDR E+D+D E+ R+
Sbjct: 205 QRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHERDKDKERDRHHERDKDEERDRER 264
Query: 89 DREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDR 148
E+ +D+EKDR DRHH D H R D D R R +R+++ +++ E+R
Sbjct: 265 HHERDKDKEKDR--DRHH-DSHAAPER----------DKDKQRGRGKERQRERNKEPEER 311
Query: 149 HKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIP 204
+K S S+ R++ RS K PA A A ++ +IP
Sbjct: 312 NKSGESSNSKTNLPERAQKRSSPEELHKTTKSV----PAPAEEAETQQPSSPARIP 363
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 34/142 (23%)
Query: 48 YERESSRSREKEKEKGRDRDR-DRDRDRTRE---KDRDREKSRDMDREKSRDREKDREKD 103
++ + SR R+ EKE R R+R D+ + R +E KD+ E+ RD +++K+R REKDRE
Sbjct: 180 HKEQDSRRRDGEKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRE-- 237
Query: 104 RHHRDRHRERSRERSERRKDRDDDDHY---------RSRDYDRRKDYDRDREDRHK---- 150
RHH ER KD++ D H+ R R ++R KD ++DR DRH
Sbjct: 238 RHH------------ERDKDKERDRHHERDKDEERDRERHHERDKDKEKDR-DRHHDSHA 284
Query: 151 --RRSQSRSRGRSEHRSRSRSR 170
R + + RGR + R R R++
Sbjct: 285 APERDKDKQRGRGKERQRERNK 306
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 15/135 (11%)
Query: 52 SSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRD-REKDREKDRHHRDRH 110
+SRS++KE +GR+ + D++ + + D+ + +D K +D R +D EK+ HHR R
Sbjct: 141 TSRSQDKENREGRELNLDKEEKKKITANNDKGEQKDPAHHKEQDSRRRDGEKE-HHRGRE 199
Query: 111 RERSRERSERR---------KDRDDD-DHYRSRDYDRRKDYDRDRE---DRHKRRSQSRS 157
R +R E+ ++RD + D RSR+ DR + ++RD++ DRH R +
Sbjct: 200 RSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHERDKDKERDRHHERDKDEE 259
Query: 158 RGRSEHRSRSRSRSR 172
R R H R + + +
Sbjct: 260 RDRERHHERDKDKEK 274
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 22/208 (10%)
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA--VVNVYINHEKKFAFVEMRSV 303
R V+V L ++ + FF Q + DA + + K +VE R +
Sbjct: 324 RSVFVSQLSARVGDRELFQFFEQQAGKVR-------DARLITDRISRRSKGVGYVEFREL 376
Query: 304 EEASNAMALDGIIFEGAPVKVR-RPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
E A+AL G G PV V+ ++ N A P+ P P A
Sbjct: 377 ESVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVP-PGFVATAPPPPVPRPYVA 435
Query: 363 E-----GPD------RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
GP+ R++VG L + T+ IR++ + FG + DL +D+ TG SKGYAF
Sbjct: 436 PKARGPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAF 495
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
++++ A +NG ++ + L V
Sbjct: 496 VQFKNMHDAKNAMEKMNGFQLAGRALRV 523
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 170 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 220
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 221 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 265
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 266 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 324
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 325 AKKALEQLNGFELAGRPMKV 344
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 167 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 217
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 218 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 262
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 263 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 321
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 322 AKKALEQLNGFELAGRPMKV 341
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 166 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 216
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 217 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 261
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 262 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 320
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 321 AKKALEQLNGFELAGRPMKV 340
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 146 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 196
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 197 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 241
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 242 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 300
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 301 AKKALEQLNGFELAGRPMKV 320
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 146 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 196
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 197 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 241
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 242 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 300
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 301 AKKALEQLNGFELAGRPMKV 320
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 168 RDARTVFCMQLSQRIRARDLEDFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 218
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 219 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 263
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 264 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 322
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 323 AKKALEQLNGFELAGRPMKV 342
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K A+VE V A+ L G G P+ V+ SQ A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKRAAAMAN 239
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 295
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 TFSDSECAKKALEQLNGFELAGRPMKV 322
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 145 RDARTVFCMQLSQRIRARDLEDFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 195
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 196 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 240
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 241 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 299
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 300 AKKALEQLNGFELAGRPMKV 319
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 158 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 208
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 209 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 253
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F +++
Sbjct: 254 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 312
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 313 AKKALEQLNGFELAGRPMKV 332
>gi|170575889|ref|XP_001893425.1| U2 auxiliary factor 65 kDa subunit [Brugia malayi]
gi|158600599|gb|EDP37742.1| U2 auxiliary factor 65 kDa subunit, putative [Brugia malayi]
Length = 502
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 64/216 (29%)
Query: 199 AAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 258
AAGQIP N + P + P VT Q +RR+YVG +P +
Sbjct: 165 AAGQIPRNN--VQSAVPVVGPSVTCQ--------------------SRRLYVGNIPFGCS 202
Query: 259 EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 318
E ++ FF+Q M G A PG+ V+ +N +K FAF+E RS++E + MA DGI F
Sbjct: 203 EDAMLDFFNQQMHLCGLAQA-PGNPVLACQMNLDKNFAFIEFRSIDETTAGMAFDGINFM 261
Query: 319 GAPVKVRRPSDYNPS---------LAATLGPSQPN-------PN-LNLAAVGLTPGSAGG 361
G +K+RRP DY P + + + P P+ P+ LN V S G
Sbjct: 262 GQQLKIRRPRDYQPMSTSYDLGNMMVSNIVPDSPHKIFIGGLPSYLNAEQVKELLSSFGQ 321
Query: 362 LEGPDRI------------------------FVGGL 373
L+ + + + GL
Sbjct: 322 LKAFNLVTEQSTGVSKGYAFAEYLDPSLTDQAIAGL 357
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 49/236 (20%)
Query: 237 MTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFA 296
+ + AR V+V L + + FF +G T + + + +
Sbjct: 235 LLNEVDSEARSVFVSQLAASLKSSDLGLFFED---KLGPRTVRDARIINDRHSRRSRGIG 291
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN-LNLAAVGLT 355
+VE+ S + S A+AL G I G P+ V TL + NP+ +NL A+ T
Sbjct: 292 YVELASTDLVSKALALSGTIVMGIPILV------------TLTDASSNPDGMNLGAILAT 339
Query: 356 -----------------PGSAGGLE---GPD------------RIFVGGLPYYFTEAQIR 383
P + GL+ G D R+F+ L IR
Sbjct: 340 LKAERRERRERIQQRRFPPLSPGLQHRLGVDVNAHAEAALPYHRLFIADLAEVLNAEDIR 399
Query: 384 ELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 439
++ E FG + DL D TG SKG A+ + +L+ +A A+N ++ DKT+ V
Sbjct: 400 QVFEPFGEIEFVDLHTD-VTGTSKGTAYIQFAELNSAQMALDAMNNFELADKTIKV 454
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 222
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 223 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 278
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 279 ITFSDSECAKKALEQLNGFELAGRPMKV 306
>gi|237829727|ref|XP_002364161.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Toxoplasma gondii ME49]
gi|211961825|gb|EEA97020.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Toxoplasma gondii ME49]
gi|221481075|gb|EEE19483.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF, putative
[Toxoplasma gondii GT1]
gi|221507020|gb|EEE32624.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF, putative
[Toxoplasma gondii VEG]
Length = 704
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 246 RRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEE 305
R +YVG LPP+ + F + MAA+GG PG V + + + +AFVE R++EE
Sbjct: 113 RELYVGNLPPSLEVPQLMEFLNAAMAAVGGALL-PGPPAVKAWRSTDGHYAFVEFRTMEE 171
Query: 306 ASNAMALDGIIFEGAPVKVRRPSDY 330
ASN M L+G+ G +++ RP Y
Sbjct: 172 ASNGMQLNGLNCMGFNLRIGRPKTY 196
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
P+R+ + LP +E ++R+L+E+FGP+ F L+K + S+ Y DL + A
Sbjct: 302 PERLCILDLPPLMSEEKVRQLVETFGPVNAFHLLKKDD--GSEMVCIVEYVDLESQEQAM 359
Query: 425 AALNG-----IKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIAL---QRL----MLQ 472
L+ I + ++ + + K + +++ L +R+ +L+
Sbjct: 360 DILHSNSPYRILLAEEAIQQEVIAPFFKKAKAKHLKTEDEEEEEDDLADGERMNIQSLLR 419
Query: 473 PGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQE 508
P V ++V+ L+ +V ++L DD+EYE+I+ED+R E
Sbjct: 420 P-QVCTRVLLLSNIVEVEDLLDDKEYEDIVEDIRLE 454
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 61/286 (21%)
Query: 284 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP 343
+V+ K A+VE +E AM L+G G P+ V+ P+Q
Sbjct: 207 IVDNKTRKSKGIAYVEFFDLESVPLAMGLNGQKLFGVPIIVQ--------------PTQA 252
Query: 344 NPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRET 403
N +A +GP R++VG L + +E ++E+ E FG L +L+K+ +T
Sbjct: 253 ERNRQ------ANQTAASTKGPMRLYVGSLHFDISEQMLKEIFEPFGRLDRVELIKE-DT 305
Query: 404 GNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ-GANQPKP----------- 451
G SKGY F + + A LNG ++ + + V + G + P
Sbjct: 306 GKSKGYGFVTFHEADAAKKAMEQLNGFELAGRPMKVGNVTERGMDGSAPSILDNEELDRT 365
Query: 452 -----------------EQESVLLHAQQQIALQRLMLQPG----------SVPSKVVCLT 484
E + L + ALQ++ P S+ ++ L+
Sbjct: 366 GIELGAHGRLALMAKLAEGTGIQLPDAAKTALQQMQSAPSFGQTNNAQQESIATQCFLLS 425
Query: 485 QVVSADELKDDEEYE-EILEDMRQEGGKFAFCSPTFCYKESGLIYT 529
+ A E +++++ E+ ED+ QE K F KE+ +Y
Sbjct: 426 NMFDAAEAHQEKDWDLELREDVLQECRKHGGAVHCFVDKEAANVYV 471
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 198 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 243
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 244 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 299
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 300 ITFSDSECAKKALEQLNGFELAGRPMKV 327
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 243 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 288
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 289 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 344
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 345 ITFSDSECAKKALEQLNGFELAGRPMKV 372
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 161 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 206
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 207 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 262
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 263 ITFSDSECAKKALEQLNGFELAGRPMKV 290
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 200 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 245
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 246 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 301
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 302 ITFSDSECAKKALEQLNGFELAGRPMKV 329
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 271 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 316
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 317 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 372
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 373 ITFSDSECAKKALEQLNGFELAGRPMKV 400
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 163 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 208
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 209 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 264
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 265 ITFSDSECAKKALEQLNGFELAGRPMKV 292
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 222
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 223 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 278
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 279 ITFSDSECAKKALEQLNGFELAGRPMKV 306
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 191 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 236
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 237 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 292
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 293 ITFSDSECAKKALEQLNGFELAGRPMKV 320
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 222
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 223 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 278
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 279 ITFSDSECAKKALEQLNGFELAGRPMKV 306
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 185 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 230
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 231 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 286
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 287 ITFSDSECAKKALEQLNGFELAGRPMKV 314
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|294905728|ref|XP_002777665.1| Splicing factor U2AF 65 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239885556|gb|EER09481.1| Splicing factor U2AF 65 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 680
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 148/363 (40%), Gaps = 58/363 (15%)
Query: 164 RSRSRSRSRSKSKRISGFDMAPP-ASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVT 222
+ R SRS S+ ++ FD P +A LAAG +M P
Sbjct: 179 KGRRWSRSPSEKRKPFKFDSPPKELAAQLAAGT--------------------SMLPQTV 218
Query: 223 GQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGD 282
+ + + + AR +Y+G +PP + + + + +G N A PG
Sbjct: 219 VSSSSTIKEAFNATLAAERQKIARELYIGQIPPGISAAELIDVLNDGLMNMGAN-AMPGR 277
Query: 283 AVVNVYINHEKKFAFVEMRSVEEASNAMA-LDGIIFE--GAPVKVRRPSDYNPSLAATLG 339
+V+ ++ + FAFVE R+ EEAS A+ L+G + G +KV RP Y +G
Sbjct: 278 PIVHGWLGGDGLFAFVEFRTPEEASIALERLNGHQLKSYGVSIKVGRPKGY-------MG 330
Query: 340 PSQPNPNLNLAAVG------LTPGSAGGLE---GPDRIFVGGLPYYFTEAQIRELL--ES 388
P+ P+ ++N G TPG E R+ + G P +E I+ L S
Sbjct: 331 PAAPDDSVNAYTAGHAATSSTTPGGISAAEVSSDTSRLCLIGFPLKASEHSIKRALRNAS 390
Query: 389 FGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNG-IKM-GDKTLTVRRANQGA 446
G +R +L+K T N + V++ +++ D G +++ G K + +
Sbjct: 391 KGEIRHLELLK--HTWNDEEIVMAVFECVNIEDEHRLKKKGEVEVQGVKARIINPKDAIV 448
Query: 447 NQPKPEQESVLLHAQ-QQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDM 505
++ A +I R++ V S +EL DD Y ++++D+
Sbjct: 449 KGYMNFDGDIMKKAMGLEIVPSRIL----------VMTNFAGSVEELLDDINYSDLMDDI 498
Query: 506 RQE 508
+ E
Sbjct: 499 KVE 501
>gi|297735186|emb|CBI17548.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 21/74 (28%)
Query: 1 MADYEV------NGEDVDNNNNNNNNNYEYGSSPQPRSA-----DDHSDSKPQHGSRDYE 49
M DYE NGED+DN YGSSPQPR + DD+SDSK QHGSR+Y+
Sbjct: 1 MPDYEGRYEGNGNGEDLDN----------YGSSPQPRGSSHGGPDDYSDSKSQHGSREYQ 50
Query: 50 RESSRSREKEKEKG 63
RESS+SRE+E+EKG
Sbjct: 51 RESSKSREREREKG 64
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 200 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 245
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 246 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 301
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 302 ITFSDSECAKKALEQLNGFELTGRPMKV 329
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A E+ V FFS+ +++ K +VE
Sbjct: 228 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYVEFYD 281
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ NL + T G++G
Sbjct: 282 AMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSN---TTGASGA- 323
Query: 363 EGP----DR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
GP DR ++VG L + TE +RE+ E+FGP+ L D E+G+ KG+ F + L
Sbjct: 324 -GPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHL 382
Query: 418 SVTDIACAALNG-IKMGDKTLTV 439
A +LNG +++ +T+ V
Sbjct: 383 EHAK-AAQSLNGKLEIAGRTIKV 404
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELTGRPMKV 323
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 161 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 206
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 207 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 262
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 263 ITFSDSECAKKALEQLNGFELAGRPMKV 290
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R AR V+ L + + FFS V G V + N ++F A+VE
Sbjct: 144 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVQDVRLITCNKTRRFKGIAYVE 194
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+ E + A+ L G G P+ V+ + + +G S PN L P
Sbjct: 195 FKDPESVTLALGLSGQKLLGVPIVVQ----HTQAEKNRMGNSMPN---------LMPK-- 239
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
G GP R++VG L + TE +R + E FG + L+ D TG SKGY F +++
Sbjct: 240 -GQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTFRNADD 298
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 299 AKKALEQLNGFELAGRPMKV 318
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K A+VE ++ A+ L G G P+ V+ LAA A
Sbjct: 212 KGIAYVEFCEIQSVPLAIGLTGQQLLGVPIIVQASQAEKNRLAAM-------------AN 258
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
L GS+G P +FVG L + TE +R + E FG + L+KD +TG SKGY F
Sbjct: 259 NLQKGSSG----PMHLFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFI 314
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQ 444
+ D A LNG ++ + + V + +
Sbjct: 315 TFSDSECARRALEQLNGFELAGRPMKVGQVTE 346
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELTGRPMKV 323
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 168 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 213
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 214 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 269
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 270 ITFSDSECAKKALEQLNGFELAGRPMKV 297
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 167 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 212
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 213 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 268
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 269 ITFSDSECAKKALEQLNGFELAGRPMKV 296
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A E+ V FFS+ +++ K +VE
Sbjct: 228 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYVEFYD 281
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ NL + T G++G
Sbjct: 282 AMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSN---TTGASGA- 323
Query: 363 EGP----DR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
GP DR ++VG L + TE +RE+ E+FGP+ L D E+G+ KG+ F + L
Sbjct: 324 -GPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHL 382
Query: 418 SVTDIACAALNG-IKMGDKTLTV 439
A +LNG +++ +T+ V
Sbjct: 383 EHAK-AAQSLNGKLEIAGRTIKV 404
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 227 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 272
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 273 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 328
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 329 ITFSDSECAKKALEQLNGFELAGRPMKV 356
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K A++E + E A+ L G G P+ V+ + TL PNL
Sbjct: 223 KGIAYIEFKDAESVPLALGLTGQKLLGVPIIVQHTQAEKNRVGNTL------PNL----- 271
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
P ++ GP R++VG L + TE +R + E FG + L+ D +TG SKGY F
Sbjct: 272 --APKTS---NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFL 326
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGAN 447
+ + A LNG ++ + + V + A+
Sbjct: 327 TFHHATDAKKAMEQLNGFELAGRPMKVGNVTERAD 361
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 170 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 215
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 216 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 271
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 272 ITFSDSECAKKALEQLNGFELAGRPMKV 299
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-AVG 353
A+VE V A+ L G G P+ V+ SQ N A A
Sbjct: 196 IAYVEFVDVSSVRLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMANN 241
Query: 354 LTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCV 413
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 242 LQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFIT 297
Query: 414 YQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 298 FSDSECAKKALEQLNGFELAGRPMKV 323
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 84/212 (39%), Gaps = 27/212 (12%)
Query: 242 TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 301
TR AR V+V L A E+ + FFS V + + K +VE
Sbjct: 204 TRDARTVFVMQLSQRAKERELKEFFSSV------GKVRTVKIITDRNSRRSKGVGYVEYD 257
Query: 302 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 361
+ A+ L+ G P+ V+ PS + +A N+ L V
Sbjct: 258 VADSVPLALGLNNQKLLGVPIIVQ-PSHAEKNRSA-------GQNVTLQKVN-------- 301
Query: 362 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
GP R++VG L Y TEA +R + E FG + L+ D + SKGY F + D
Sbjct: 302 -SGPMRLYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAK 360
Query: 422 IACAALNGIKMGDKTLTV----RRANQGANQP 449
A LNG ++ + + V R QG P
Sbjct: 361 RALDQLNGFELAGRPMKVNHVTERNEQGQQAP 392
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 199 RDQRTVFAYQMPLKATERDVYEFFSKA------GKVRDVRLIMDRNSRRSKGVGYIEFYD 252
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ +L Q N + A VG P A
Sbjct: 253 AMSVPMAIALSGQLLLGQPVMVK-PSEAEKNLV------QSNASSGAAVVG--PYGA--- 300
Query: 363 EGPDR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 421
DR ++VG L + TEA +RE+ E FG + L D ETG+ KG+ F + L
Sbjct: 301 --VDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAK 358
Query: 422 IACAALNG 429
A +LNG
Sbjct: 359 -AAQSLNG 365
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA-A 351
K A++E V A+ L G G P+ V+ SQ N A A
Sbjct: 194 KGIAYMEFVDVSSVPLAIGLTGQRVLGVPIIVQ--------------ASQAEKNRAAAMA 239
Query: 352 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 240 NNLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 295
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 296 ITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A+E+ FFS+ +++ K ++E
Sbjct: 179 RDQRTVFAYQMPLKASERDAYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 232
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ +L + N A G+ G G +
Sbjct: 233 AMSVPMAIALSGQLLLGQPVMVK-PSEAEKNLVQS--------NATSGAAGVV-GPYGAV 282
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
+ +++VG L + TE+Q+RE+ E FGP+ L D ETG+ KG+ F + L
Sbjct: 283 D--RKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFAHLEHAK- 339
Query: 423 ACAALNG-IKMGDKTLTV 439
A +LNG +++ +T+ V
Sbjct: 340 AAQSLNGKLEIAGRTIKV 357
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 199 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 252
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ +L Q N + A VG G +
Sbjct: 253 AMSVPMAIALSGQLLLGQPVMVK-PSEAEKNLV------QSNASSGAAVVG----PYGAV 301
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
+ +++VG L + TEA +RE+ E FG + L D ETG+ KG+ F + L
Sbjct: 302 D--RKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAK- 358
Query: 423 ACAALNG-IKMGDKTLTV 439
A +LNG +++ +T+ V
Sbjct: 359 AAQSLNGKLEIAGRTIKV 376
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF---AFVE 299
R R V+ L + + FFS V G V + N K+F A++E
Sbjct: 188 RDMRTVFCMQLSQRIRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 238
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
R E + A+ L G G P+ V+ LA N+
Sbjct: 239 FRDPESVALALGLSGQRLLGIPISVQHTQAEKNRLA----------NIPPPPPPKV---- 284
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+ GP R++VG L + TE +R + E FG + L+ D +TG SKGY F + +
Sbjct: 285 --IVGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADD 342
Query: 420 TDIACAALNGIKMGDKTLTV 439
A LNG ++ + + V
Sbjct: 343 AKKALEQLNGFELAGRPMKV 362
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 42/239 (17%)
Query: 239 QQATRHARRVYVGGLPPTANEQSVATFFSQV------MAAIGGNTAGPGDAVVNVYINHE 292
++A R V V L A+E+ + FFS+V + I +G V
Sbjct: 480 EEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGV-------- 531
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP-NPNLNLAA 351
A+VE + E A+A +G++ + P+K++ S + AA QP +PN
Sbjct: 532 ---AYVEFYTQEAVIKALAANGMMLKNRPIKIQ-SSQAEKNRAAKAAKHQPIDPN----- 582
Query: 352 VGLTPGSAGGLEGPDRIFVGGL--PYY-FTEAQIRELLESFGPLRGFDLVKDRETGNSKG 408
+ P ++++GGL P TE ++++L FG + ++ +D TG SKG
Sbjct: 583 -----------DIPLKLYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKG 631
Query: 409 YAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE--QESVLLHAQQQIA 465
+ F + S A +NG+++ + + V A + QE++L QQQ+A
Sbjct: 632 FGFIQFHKASEAIEALTVMNGMEVAGREIKVGYAQDSKYLLACDNTQENIL--KQQQMA 688
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 99/252 (39%), Gaps = 60/252 (23%)
Query: 245 ARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV---NVYINHEKKFAFVEMR 301
A R+YVG L +E+ + T FS GP +V + K FAFVE
Sbjct: 250 ACRIYVGSLNFELSEEDIKTAFSPF---------GPVKSVSLTKDPLTQRSKGFAFVEYA 300
Query: 302 SVEEASNAMA-LDGIIFEGAPVKVRRP------------------------SDYNPSLAA 336
+ A+ A+ ++G + G +KV RP NPSL
Sbjct: 301 YPDAATAALKHMNGFMLAGRQLKVGRPHTPGAGLPGMPGMPGVMMPGLSPFPQLNPSLP- 359
Query: 337 TLGPS----------------------QPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLP 374
+ PS QP P + LT +A +RI+VG +
Sbjct: 360 VMNPSILLQANAAIEAQKAAAAAANGSQPTPEMMQEFTKLTGKTAADATASNRIYVGSIH 419
Query: 375 YYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGD 434
+ T I+ + E+FG ++ L+ + ETG KGY F Y++ + A +NG +G
Sbjct: 420 WDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQMNGWDLGG 479
Query: 435 KTLTVRRANQGA 446
+ + V RA A
Sbjct: 480 RPIKVGRAISSA 491
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 367 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 426
RI+VG L + +E I+ FGP++ L KD T SKG+AF Y + D A AA
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEY---AYPDAATAA 308
Query: 427 L---NGIKMGDKTLTVRRANQ-GANQP-KPEQESVLL 458
L NG + + L V R + GA P P V++
Sbjct: 309 LKHMNGFMLAGRQLKVGRPHTPGAGLPGMPGMPGVMM 345
>gi|255576469|ref|XP_002529126.1| prp4, putative [Ricinus communis]
gi|223531405|gb|EEF33239.1| prp4, putative [Ricinus communis]
Length = 1033
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 14/144 (9%)
Query: 50 RESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMD--REKSRDREKDREKDRHHR 107
RE R R +E+++ RD+DR+R R+R + +D+DRE+SRD D REK R+ +D DR+ R
Sbjct: 314 REQGRERSRERDQRRDKDRERSRERDQRRDKDRERSRDRDLRREKGREGSRDSSVDRYRR 373
Query: 108 -----DRHRERSRERSERRKDRDDDDHYRSRDYDRRKD--YDR--DRE---DRHKRRSQS 155
+R R+R +R +R+ + + R D D+RK+ ++R DRE DR + R Q
Sbjct: 374 REKEQERSRDREVDRDLKRQKQQERSWDREVDRDQRKERQWERSLDREMINDRRREREQG 433
Query: 156 RSRGRSEHRSRSRSRSRSKSKRIS 179
RSR + R + + RSK K +S
Sbjct: 434 RSREEELDKKRQKEKDRSKDKSMS 457
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 79/156 (50%), Gaps = 20/156 (12%)
Query: 35 DHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRD------RDRDRTREKDRDREKSRDM 88
D S+ + RD +RE SR R+ +EKGR+ RD R R++ +E+ RDRE RD+
Sbjct: 331 DRERSRERDQRRDKDRERSRDRDLRREKGREGSRDSSVDRYRRREKEQERSRDREVDRDL 390
Query: 89 DREKSRDREKDREKDRHHR-DRHRERS----------RERSERRKDRDDDDHYRSRDYDR 137
R+K ++R DRE DR R +R ERS RER + R ++ D R ++ DR
Sbjct: 391 KRQKQQERSWDREVDRDQRKERQWERSLDREMINDRRREREQGRSREEELDKKRQKEKDR 450
Query: 138 RKDYDRDR---EDRHKRRSQSRSRGRSEHRSRSRSR 170
KD R DR R + RG R R+R R
Sbjct: 451 SKDKSMSRANERDRDWERVKETDRGSYAERERARDR 486
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 14/101 (13%)
Query: 84 KSRDMDREKSRD--REKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDY 141
+ R+M+ E+ R+ RE+ RE+D RD+ RERSRER +RR D D RSRD D R++
Sbjct: 304 REREMNWEQRREQGRERSRERD-QRRDKDRERSRERDQRR----DKDRERSRDRDLRREK 358
Query: 142 DRDRE-----DRHKRR--SQSRSRGRSEHRSRSRSRSRSKS 175
R+ DR++RR Q RSR R R R + + +S
Sbjct: 359 GREGSRDSSVDRYRRREKEQERSRDREVDRDLKRQKQQERS 399
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R AR V+ L + + + FFS+V + + K A+VE
Sbjct: 226 RDARTVFCMQLARSIRPRDLEEFFSEVAKVRDVRI------ITDSKTRRSKGIAYVEFWD 279
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
++ A++L G GAP+ V+ P+Q N +A+ T +
Sbjct: 280 LDSVPLALSLHGKRLLGAPIVVQ--------------PTQSEKNRMASAMLATAFTQN-- 323
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
GP +++VG L + TE +R + E FG + L+KD ET S+GY F + +
Sbjct: 324 RGPMKLYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKR 383
Query: 423 ACAALNGIKMGDKTLTVRRANQGAN 447
A LNG ++ + + V + N
Sbjct: 384 AMEQLNGFELAGRPMKVGHVTEHQN 408
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K A++E A+ L G G P+ V+ S + AA L A
Sbjct: 190 KGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQA-SQAEKNRAAAL------------AN 236
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 237 NLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFI 292
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 293 TFSDAECAKKALEQLNGFELAGRPMKV 319
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
I+ GGLPY +E + + FG LV+D+ETG SKG+ + Y+D TD+A L
Sbjct: 19 IYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 78
Query: 428 NGIKMGDKTLTVRRANQGA-NQPKPEQESV 456
G ++G + + V A A + PE+ V
Sbjct: 79 GGAEIGGRLVRVDHARYKARDDEDPEEFKV 108
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 352 VGLTPGSAGGLEGPDRIFV--GGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
G+ P ++ ++ D FV GGLPY +E + + FG LV+D+ETG SKG+
Sbjct: 17 AGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGF 76
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
+ Y+D TD+A L G ++G + + V A
Sbjct: 77 GWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHA 109
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K A+VE A+ L G G P+ V+ SQ N A
Sbjct: 195 KGIAYVEFVDQSSVPLAIGLTGQKVLGVPIIVQ--------------ASQAEKN---RAA 237
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
+ G GP R++VG L + TE +R + E FG + L+ D ETG SKGY F
Sbjct: 238 AMANNLQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 297
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 298 TFSDSECAKKALEQLNGFELAGRPMKV 324
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
I+ GGLPY +E I + FG L +D+ETG SKG+ + Y+D TD+A L
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 428 NGIKMGDKTLTVRRA 442
+G ++G + + V A
Sbjct: 95 SGAEIGGRLIRVDHA 109
>gi|225462520|ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]
Length = 902
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 28/160 (17%)
Query: 45 SRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDR-------- 96
++D E++ SRE+ KE +R++DR+RD+ REKD DREK RD +RE+ +DR
Sbjct: 82 TKDSEKDRVTSRERRKEDRDEREKDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKE 141
Query: 97 -----------EKDREKDR---HHRDRHRERSRERSERRKDRD---DDDHYRSRDYDRRK 139
++ R+K+R +RDR +ER +ER +R KDRD + + + R+ +R
Sbjct: 142 REREREVDKESDRGRDKERGKEKNRDRDKEREKER-DRTKDRDREKEKEKSKDREKEREN 200
Query: 140 DYDRDRE--DRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
D DRDR+ D+ K + + R + R + R R + R K R
Sbjct: 201 DKDRDRDAIDKEKGKERIRDKEREADQDRDRYKDRDKGSR 240
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 52 SSRSREKE--KEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDR 109
S R R+KE KEK RDRD++R+++R R KDRDREK ++ +++ ++RE D+++DR D+
Sbjct: 152 SDRGRDKERGKEKNRDRDKEREKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDK 211
Query: 110 HRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRD 144
+ + R R + R+ D D Y+ RD RK+ D D
Sbjct: 212 EKGKERIRDKEREADQDRDRYKDRDKGSRKNRDED 246
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 23/130 (17%)
Query: 66 RDRDRDRDRTREKD---RDREKSRDMDREKSRDRE-KDREKDR-HHRDRHRERSRERSER 120
R +DR + R EKD +DRE+S+ D K R++E KD EKDR R+R +E +R ER
Sbjct: 47 RSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKE---DRDER 103
Query: 121 RKDRDDDDHYRSRDYDRRK------DYDRDREDR--------HKRRSQSRSRGRSEHRSR 166
KDR+ D R +DYDR K + D+DR+DR + + RGR + R +
Sbjct: 104 EKDRNRD-KVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGK 162
Query: 167 SRSRSRSKSK 176
++R R K +
Sbjct: 163 EKNRDRDKER 172
>gi|395536556|ref|XP_003770280.1| PREDICTED: TRAF3-interacting protein 1 [Sarcophilus harrisii]
Length = 691
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 87/145 (60%), Gaps = 12/145 (8%)
Query: 36 HSDSKPQHGSRDYERESSRSREK------EKEKGRDRDRDRDRDRTREKDRDREKSRDMD 89
H + + + S +R SR R++ E+ K R++DRD++R++++E DR+R K D D
Sbjct: 139 HKEKEEKRNSEIKDRSPSRERKQREEGKDEESKQREKDRDKEREKSKENDRERHK--DPD 196
Query: 90 REKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRH 149
R+K +D E+DR K+R ++R RE+SR++ KDR + R ++ D++ D +++E R
Sbjct: 197 RDKVKDGERDRNKNRAKQEREREKSRDKDRGPKDR---ELERDKEKDKKNDSGKEKE-RL 252
Query: 150 KRRSQSRSRGRSEHRSRSRSRSRSK 174
K R + R + + + + R + R R K
Sbjct: 253 KERDREREKEKGKDKDRDKRRERVK 277
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 14/154 (9%)
Query: 38 DSKPQHGSRDYERESSRSREKEKEKGRDRDR----DRDRDRTREK-DRDREKSRDMDR-- 90
+SK + RD ERE S+ ++E+ K DRD+ +RDR++ R K +R+REKSRD DR
Sbjct: 169 ESKQREKDRDKEREKSKENDRERHKDPDRDKVKDGERDRNKNRAKQEREREKSRDKDRGP 228
Query: 91 ---EKSRDREKDREKDR-HHRDRHRERSRER-SERRKDRD-DDDHYRSRDYDRRKDYDRD 144
E RD+EKD++ D ++R +ER RER E+ KD+D D R +D + K++++D
Sbjct: 229 KDRELERDKEKDKKNDSGKEKERLKERDREREKEKGKDKDRDKRRERVKDGEHSKEHEKD 288
Query: 145 REDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRI 178
+ + + +++ ++ G E+ S+ S S K R+
Sbjct: 289 K-IKEQEKTEKKAAGTVENLSKKFSESTVKDPRM 321
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
Query: 51 ESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKS-----RDREKDREKDRH 105
E S+ REK+++K R++ ++ DR+R ++ DRD+ K + DR K+ R+REK R+KDR
Sbjct: 168 EESKQREKDRDKEREKSKENDRERHKDPDRDKVKDGERDRNKNRAKQEREREKSRDKDRG 227
Query: 106 HRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRS 165
+DR ER +E+ ++ + + + RD +R K+ +D+ DR KRR + + S+
Sbjct: 228 PKDRELERDKEKDKKNDSGKEKERLKERDREREKEKGKDK-DRDKRRERVKDGEHSKEHE 286
Query: 166 RSRSRSRSKSKR 177
+ + + + K+++
Sbjct: 287 KDKIKEQEKTEK 298
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 76/129 (58%), Gaps = 15/129 (11%)
Query: 58 KEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH-----RDRHRE 112
KEKE+ R+ + +DR +RE+ + RE+ +D E+S+ REKDR+K+R R+RH++
Sbjct: 140 KEKEEKRNSEI-KDRSPSRER-KQREEGKD---EESKQREKDRDKEREKSKENDRERHKD 194
Query: 113 RSRER-SERRKDRDDDDHYRSRDYDRRKDYDR---DRE-DRHKRRSQSRSRGRSEHRSRS 167
R++ + +DR+ + + R+ ++ +D DR DRE +R K + + G+ + R +
Sbjct: 195 PDRDKVKDGERDRNKNRAKQEREREKSRDKDRGPKDRELERDKEKDKKNDSGKEKERLKE 254
Query: 168 RSRSRSKSK 176
R R R K K
Sbjct: 255 RDREREKEK 263
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
I+ GGLPY TE I + FG L +D+ETG SKG+ + Y+D TD+A L
Sbjct: 19 IYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 78
Query: 428 NGIKMGDKTLTVRRA 442
G + + ++V A
Sbjct: 79 GGADISGRMISVDHA 93
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 59/76 (77%), Gaps = 4/76 (5%)
Query: 50 RESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDR 109
+E R +++ KEK RD+DR++++D R++DR++EK RD DR K +DR++ +EKDR +DR
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKD--RDQDRNKEKDRDQDRNKEKDRDRSKEKDR-DQDR 1936
Query: 110 HRERSRERSERRKDRD 125
++E+ R+R +R K++D
Sbjct: 1937 NKEKDRDR-DRSKEKD 1951
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 59/78 (75%), Gaps = 9/78 (11%)
Query: 68 RDRDR--DRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRD 125
+++DR DR++EKDRD++++++ DR++ R++EKDR++DR ++++ R+RS+E KDRD
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKDRDQDRNKEKDRDQDR-NKEKDRDRSKE-----KDRD 1933
Query: 126 DD-DHYRSRDYDRRKDYD 142
D + + RD DR K+ D
Sbjct: 1934 QDRNKEKDRDRDRSKEKD 1951
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 10/79 (12%)
Query: 76 REKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSE-RRKDRD-DDDHYRSR 133
+EKDRD+++S++ DR++ R++EKDR++DR+ + ++R + R K++D D + R
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKDRDQDRN-------KEKDRDQDRNKEKDRDRSKEKDR 1932
Query: 134 DYDRRKDYDRDREDRHKRR 152
D DR K+ DRDR DR K +
Sbjct: 1933 DQDRNKEKDRDR-DRSKEK 1950
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 15/80 (18%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMD------------REKS 93
R+ E++ + R KEK++ R +++DRD+DR +EKDRDR++S++ D +E
Sbjct: 1908 RNKEKDRDQDRNKEKDRDRSKEKDRDQDRNKEKDRDRDRSKEKDRERSRERERSRGKEGE 1967
Query: 94 RDREKDREKDRHHRDRHRER 113
R RE + E+ HRD+ E+
Sbjct: 1968 RQRETEGER---HRDQDGEK 1984
>gi|296090475|emb|CBI40671.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 28/160 (17%)
Query: 45 SRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDR-------- 96
++D E++ SRE+ KE +R++DR+RD+ REKD DREK RD +RE+ +DR
Sbjct: 82 TKDSEKDRVTSRERRKEDRDEREKDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKE 141
Query: 97 -----------EKDREKDR---HHRDRHRERSRERSERRKDRD---DDDHYRSRDYDRRK 139
++ R+K+R +RDR +ER +ER +R KDRD + + + R+ +R
Sbjct: 142 REREREVDKESDRGRDKERGKEKNRDRDKEREKER-DRTKDRDREKEKEKSKDREKEREN 200
Query: 140 DYDRDRE--DRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
D DRDR+ D+ K + + R + R + R R + R K R
Sbjct: 201 DKDRDRDAIDKEKGKERIRDKEREADQDRDRYKDRDKGSR 240
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 52 SSRSREKE--KEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDR 109
S R R+KE KEK RDRD++R+++R R KDRDREK ++ +++ ++RE D+++DR D+
Sbjct: 152 SDRGRDKERGKEKNRDRDKEREKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDK 211
Query: 110 HRERSRERSERRKDRDDDDHYRSRDYDRRKDYD 142
+ + R R + R+ D D Y+ RD RK+ D
Sbjct: 212 EKGKERIRDKEREADQDRDRYKDRDKGSRKNRD 244
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 23/130 (17%)
Query: 66 RDRDRDRDRTREKD---RDREKSRDMDREKSRDRE-KDREKDR-HHRDRHRERSRERSER 120
R +DR + R EKD +DRE+S+ D K R++E KD EKDR R+R +E +R ER
Sbjct: 47 RSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKE---DRDER 103
Query: 121 RKDRDDDDHYRSRDYDRRK------DYDRDREDR--------HKRRSQSRSRGRSEHRSR 166
KDR+ D R +DYDR K + D+DR+DR + + RGR + R +
Sbjct: 104 EKDRNRD-KVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGK 162
Query: 167 SRSRSRSKSK 176
++R R K +
Sbjct: 163 EKNRDRDKER 172
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 192 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 245
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ +L Q N + A V G+
Sbjct: 246 AMSVPMAIALSGQLLLGQPVMVK-PSEAEKNLV------QSNASGGAAGVAGPYGAVD-- 296
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
+++VG L + TE+Q+RE+ E FGP+ L D ETG+ KG+ F + L
Sbjct: 297 ---RKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLEHAK- 352
Query: 423 ACAALNG-IKMGDKTLTV 439
A +LNG +++ +T+ V
Sbjct: 353 AAQSLNGKLEIAGRTIKV 370
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K ++E A+AL G G PV V+ PS+ NL + +
Sbjct: 260 KGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQST 304
Query: 353 GLTPGSAGGLEGP-----DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSK 407
G GGL GP R++VG L + TE Q+R++ E FG + L D ETG+ K
Sbjct: 305 TAAAGGPGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCK 364
Query: 408 GYAFCVYQDLSVTDIACAALNG-IKMGDKTLTV 439
G+ F + L A +LNG + + +T+ V
Sbjct: 365 GFGFVQFARLEDAR-AAQSLNGQLDIAGRTIKV 396
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 52/303 (17%)
Query: 247 RVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV---NVYINHEKKFAFVEMRSV 303
R+Y+G + E + FS GP ++ + + F F+E
Sbjct: 604 RIYIGNIHFNLTEADIVAAFSPF---------GPIKSLSLSKDPATGRSRGFCFIEYTYP 654
Query: 304 EEASNAMA-LDGIIFEGAPVKVRRPSDYNPSLAAT--------------LGPSQPNPNLN 348
E A NA+ ++ G +KVR+PS + AAT L P+ N
Sbjct: 655 EAAINAIQNMNQKTISGRQIKVRQPSIPVINPAATGVSVGMGGGGMSEILQPNIIPSNTF 714
Query: 349 L------------AAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFD 396
L A + TP + +R++VG +P+ TE QI+ + S G +
Sbjct: 715 LSSTSVASSFSSQALLNNTP--VKERDNDNRVYVGSVPWNATEDQIKTIFSSIGNVVSCS 772
Query: 397 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA-----NQPKP 451
L + ETG GY F Y + + A + NG + + L VR+ + A N
Sbjct: 773 LKPNLETGRHMGYGFIDYDNPKSAEDAISTFNGYDINGRQLKVRKPVRNAPKVNNNDGNL 832
Query: 452 EQESVLLHAQQQIAL-QRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGG 510
++++ L+ +Q+I L Q+L+ ++ + + + S EL DE +E E+++ E
Sbjct: 833 LEDNISLNNEQKILLTQKLLAASEPATNRCMVMRNLGSPAEL--DEYFE---EEIKNECS 887
Query: 511 KFA 513
F
Sbjct: 888 SFG 890
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 31 RSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDR 90
+S + SD K H RD E R RE++KEK R+ R D+ REK RD R
Sbjct: 3 KSRREDSDLKKSHRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHR 62
Query: 91 EKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
+K +D+E+ R RD R+R+RER++ R+ D DH RD +R K+ +RD+E
Sbjct: 63 DK-----RDKERTRSSRDDERDRARERTKDREKERDRDH-EGRDAEREKERERDKE 112
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 73 DRTREKDRDREKS-RDMDR--EKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDH 129
+++R +D D +KS RD DR E+ R+RE+D+EK H R RSER K DD
Sbjct: 2 EKSRREDSDLKKSHRDRDRNGERHRERERDKEKKEHRESR-------RSEREKS--SDDK 52
Query: 130 YRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSR 172
+R ++ D+ +D RD+E R R R R + R + R R
Sbjct: 53 HREKERDKHRD-KRDKERTRSSRDDERDRARERTKDREKERDR 94
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 91 EKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYD---RDRE- 146
EKSR + D +K RDR+ ER RER +D++ +H SR +R K D R++E
Sbjct: 2 EKSRREDSDLKKSHRDRDRNGERHRERE---RDKEKKEHRESRRSEREKSSDDKHREKER 58
Query: 147 DRHK-RRSQSRSR-GRSEHRSRSRSRSRSKSK 176
D+H+ +R + R+R R + R R+R R++ + K
Sbjct: 59 DKHRDKRDKERTRSSRDDERDRARERTKDREK 90
>gi|225438475|ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
Length = 542
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 167 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 220
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
A+AL G + G PV V+ PS+ NL + +GG+
Sbjct: 221 AMSVPMAIALSGHLLHGQPVMVK--------------PSEAEKNL--VQSNASGAVSGGI 264
Query: 363 EGP----DR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
GP DR ++VG L + TE Q+R++ E FG + L D ETG KG+ F + +L
Sbjct: 265 AGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAEL 324
Query: 418 SVTDIACAALNG 429
A LNG
Sbjct: 325 EHAK-AAQNLNG 335
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH 105
R E+E R R+KEKE+ DRDRD++R +EK+RDR D+EK ++E+DR+KDRH
Sbjct: 687 RHTEKEKERDRDKEKER--DRDRDKERHIEKEKERDR------DKEKHIEKERDRDKDRH 738
Query: 106 -HRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRS 161
+++ R+++++R ++K ++ D + D R + D K+ + SR ++
Sbjct: 739 IEKEKERDKAKDRDRKQKMLRENCSRNLADLHTKPDSTRLKHDGSKKSADPNSRQKT 795
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 84 KSRDMDREKSRDREKDREKDRH-HRDRHRERSRERSERRKDRDDDDHY-----RSRDYDR 137
K R++++EK E+DR+K+RH +++ R+R +E+ ER +DRD + H R RD ++
Sbjct: 671 KERNIEKEK----ERDRDKERHTEKEKERDRDKEK-ERDRDRDKERHIEKEKERDRDKEK 725
Query: 138 RKDYDRDRE-DRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPASAMLAAGAG 196
+ +RDR+ DRH + + R + + R + R S+ ++ P ++ + G+
Sbjct: 726 HIEKERDRDKDRHIEKEKERDKAKDRDRKQKMLRENC-SRNLADLHTKPDSTRLKHDGSK 784
Query: 197 AAA 199
+A
Sbjct: 785 KSA 787
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 365 PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 424
P +FV L ++ TE + +L FG L+ + ++ G SKGYAF Q + A
Sbjct: 170 PPALFVANLEWWTTEQNLEQLFSEFGKLKNLKIFENETNGKSKGYAFVELQSHDIARQAK 229
Query: 425 AALNGIKMGDKTLTVRRANQGANQ 448
LN ++ KT+ ++ NQ Q
Sbjct: 230 EKLNNKELNGKTIIIKSMNQHTYQ 253
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
++VGG+P+ E I ++ +G + ++V+++ETG S+G+ F Y+D T++A L
Sbjct: 35 VYVGGMPFEMNEGDIIAVMSQYGEIEDCNMVRNKETGKSQGFCFIKYEDQRSTNLAVDNL 94
Query: 428 NGIKMGDKTLTV 439
G + + L V
Sbjct: 95 TGYNIMGRLLRV 106
>gi|303274813|ref|XP_003056721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461073|gb|EEH58366.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 709
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 139/366 (37%), Gaps = 75/366 (20%)
Query: 112 ERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGR-SEHRSRSRSR 170
E RE+ ER+K R D + + + Q G+ + + R
Sbjct: 167 ESKREKRERKK-----APMRGPDMESARAAAAMMTPAYLANMQHIMSGQLIPAQGLNHER 221
Query: 171 SRSKSKRISGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALP 230
+ G M P+ G G G + GA+ A PL+ ++ A
Sbjct: 222 GLVVQSTVGGISMGDPSGD--GEGFGFGLPGTVGGASAA---------PLMKHGRWNATD 270
Query: 231 VMPV--QAMTQQATRHARRVYVGGLPPT-----ANEQSVATFFSQVMAAIGGNTAG---- 279
V+ + M + AT+++RRVYV L A ++ T VM A G
Sbjct: 271 VVVEYHRTMWRDATKNSRRVYVHNLNTAIIGVDAKDELGKTLHDAVMVAGAAPWHGVDGT 330
Query: 280 ---------PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY 330
P V V+I+ +K ++FVE +VE+A +ALDGI+ G +K+RRP DY
Sbjct: 331 EKLHPKLDAPTGVVEKVFIS-DKGYSFVEGTAVEDACALLALDGIVVRGNLLKIRRPKDY 389
Query: 331 ----NP-------------SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGL 373
NP + + PS P+ N +IF+G L
Sbjct: 390 VASENPLVVDGTMKDVMKRTFEKIIRPSVPDTN-------------------TKIFLGNL 430
Query: 374 P-YYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKM 432
+++E++ SFG +R D +G A+ Y D +V A + L G+ +
Sbjct: 431 GDRELDVLELKEIIASFGRVRAMRAETDAHGRIKRGRAWFEYLDPTVAPHAVSGLTGVMV 490
Query: 433 GDKTLT 438
+ L
Sbjct: 491 NGRRLV 496
>gi|195499487|ref|XP_002096969.1| GE25964 [Drosophila yakuba]
gi|194183070|gb|EDW96681.1| GE25964 [Drosophila yakuba]
Length = 908
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 11/80 (13%)
Query: 54 RSREKEKEKGRDRD----RDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR-HHRD 108
R ++KEK++ RDRD +DRDRD+++EKDRD+ K +D DR + +EKDR++DR +D
Sbjct: 176 RVKDKEKDRDRDRDKSKEKDRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDRDRAKSKD 235
Query: 109 RHR------ERSRERSERRK 122
+ E+ +E+SE RK
Sbjct: 236 KFTAAQAPFEKEKEKSEGRK 255
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 23/102 (22%)
Query: 46 RDYERESSRSREKEKEKGRDRDR--DRDRDRTREKDRDR------EKSRDMDREKSRDR- 96
+D E++ R R+K KEK RDRD+ ++DRD+++EKDRDR EK RD DR KS+D+
Sbjct: 178 KDKEKDRDRDRDKSKEKDRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDRDRAKSKDKF 237
Query: 97 -------EKDREKDRHHR------DRHRERSRERSERRKDRD 125
EK++EK + H E+ RER ER K RD
Sbjct: 238 TAAQAPFEKEKEKSEGRKRSAVEPASHPEK-RERHERDKQRD 278
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 16/105 (15%)
Query: 74 RTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRER-SERRKDRDDDDHYRS 132
R ++K++DR++ RD +EK RDR+K +EKD RD+ +E+ R+R +E+ K++D
Sbjct: 176 RVKDKEKDRDRDRDKSKEKDRDRDKSKEKD---RDKSKEKDRDRVTEKSKEKD------- 225
Query: 133 RDYDRRKDYDRDRE-----DRHKRRSQSRSRGRSEHRSRSRSRSR 172
RD DR K D+ ++ K +S+ R R E S R R
Sbjct: 226 RDRDRAKSKDKFTAAQAPFEKEKEKSEGRKRSAVEPASHPEKRER 270
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 24/149 (16%)
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
++E A+AL G + G PV V+ PS+ NL + T
Sbjct: 404 YIEFYDAMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSN---TT 446
Query: 357 GSAGGLEGP----DR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
A G+ GP DR ++VG L + TE+Q+RE+ E FG + L D ETG+ KG+ F
Sbjct: 447 TGAAGVVGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGF 506
Query: 412 CVYQDLSVTDIACAALNG-IKMGDKTLTV 439
+ + A +LNG +++ +T+ V
Sbjct: 507 IQFAHIEHAK-AAQSLNGKLEIAGRTIKV 534
>gi|291241720|ref|XP_002740759.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Saccoglossus kowalevskii]
Length = 1091
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 8/119 (6%)
Query: 53 SRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRE 112
S+SRE++ + + ++RD R +++E+D R KS++ +S+ RE+D H R R R+
Sbjct: 118 SKSRERDHRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERD-----HKRSRSRD 172
Query: 113 RSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRS 171
R +RSE R + RS+ +RRK + RE R R+S SR + R EHR+++ +++
Sbjct: 173 RENKRSETRPQ--ERRRSRSKSKERRKSRSKSRERRQDRKSPSRIKER-EHRAKTPTKN 228
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 79 DRDREKSRDMDREKSRDREKD-REKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDR 137
D R KSR+ D +S+ +E+D R RD R +S+E RR + DH RSR
Sbjct: 114 DHRRSKSRERDHRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERDHKRSR---- 169
Query: 138 RKDYDRDRED-RHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
RDRE+ R + R Q R R RS+ + R +SRS+S+ +R
Sbjct: 170 ----SRDRENKRSETRPQERRRSRSKSKERRKSRSKSRERR 206
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 20/109 (18%)
Query: 69 DRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDD 128
D R ++RE+D R KS++ D +S+ +E RD R +S+E RR + D
Sbjct: 114 DHRRSKSRERDHRRSKSKERDHRRSKSKE---------RDHRRSKSKEHVHRRSKSRERD 164
Query: 129 HYRSRDYDRRKDYDRDRED-RHKRRSQSRSRGRSEHRSRSRSRSRSKSK 176
H RSR RDRE+ R + R Q R R RS +S+ R +SRSKS+
Sbjct: 165 HKRSRS--------RDRENKRSETRPQERRRSRS--KSKERRKSRSKSR 203
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 87 DMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
D R KSR+R+ R K + RD R +S+ER RR + H RS+ R +D+ R R
Sbjct: 114 DHRRSKSRERDHRRSKSKE-RDHRRSKSKERDHRRSKSKEHVHRRSKS--RERDHKRSRS 170
Query: 147 -DRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRIS 179
DR +RS++R + R RSRS+SK +R S
Sbjct: 171 RDRENKRSETRPQ------ERRRSRSKSKERRKS 198
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 35 DHSDSKPQHG----SRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDR 90
DH SK + S+ ER+ RSR +++E R R ++R R+R K ++R KSR R
Sbjct: 144 DHRRSKSKEHVHRRSKSRERDHKRSRSRDRENKRSETRPQERRRSRSKSKERRKSRSKSR 203
Query: 91 EKSRDREK-DREKDRHHR 107
E+ +DR+ R K+R HR
Sbjct: 204 ERRQDRKSPSRIKEREHR 221
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K ++VE + + A+ L G P+ V+ ++ N N ++
Sbjct: 204 KGISYVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQ------------AEKNRVGNPTSI 251
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
LT G+ G P R++VG L + TE +R + E FG + L++D ET S+GY F
Sbjct: 252 -LTKGNIG----PMRLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFI 306
Query: 413 VYQDLSVTDIACAALNGIKMGDKTLTV 439
+ D A LNG ++ + + V
Sbjct: 307 TFHDSEDAKKALEQLNGFELAGRPMKV 333
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 24/149 (16%)
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
++E A+AL G + G PV V+ PS+ NL + T
Sbjct: 404 YIEFYDAMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSN---TT 446
Query: 357 GSAGGLEGP----DR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 411
A G+ GP DR ++VG L + TE+Q+RE+ E FG + L D ETG+ KG+ F
Sbjct: 447 TGAAGVVGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGF 506
Query: 412 CVYQDLSVTDIACAALNG-IKMGDKTLTV 439
+ + A +LNG +++ +T+ V
Sbjct: 507 IQFAHIEHAK-AAQSLNGKLEIAGRTIKV 534
>gi|357441861|ref|XP_003591208.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
gi|355480256|gb|AES61459.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
Length = 936
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 20/112 (17%)
Query: 51 ESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRD-----REKDREKDRH 105
+S R+REKE+ K + RDR+RD+ + REK RDRE RD DR+K +D RE DREKD
Sbjct: 124 DSERAREKERGKEKTRDRERDKGKEREKHRDRESYRDGDRDKGKDKIREERESDREKD-- 181
Query: 106 HRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRED---RHKRRSQ 154
RSR+R R+ +D Y S + D R DY R++ +H++ S+
Sbjct: 182 -------RSRDRGSRKAHEED---YESGNLDDRVDYHEKRDEDVGKHEKASK 223
>gi|440796324|gb|ELR17433.1| Sec7 and ankyrin domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1521
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 14/115 (12%)
Query: 45 SRDYERESSRSREKEK---EKGRDRDRDRDRDRTREKDRDREKSR---------DMDREK 92
++D +++S S+++E+ EK +D+DR D+ REKD+DR K R DRE+
Sbjct: 259 TKDGDKDSKDSKDRERTRDEKDKDKDRSERGDKDREKDKDRHKDRGERGDKSDGGKDRER 318
Query: 93 SRDREKDREKDRHHRDRHRERSRER-SERRKD-RDDDDHYRSRDYDRRKDYDRDR 145
+R+ +KDRE+ D+ RER ++R E+ KD +D D R+R+ D+ K+ DR+R
Sbjct: 319 ARESDKDRERSAKDGDKDRERDKDRDKEKEKDGKDSKDRERTREGDKEKEKDRER 373
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 10/116 (8%)
Query: 35 DHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDR-----DREKSR--D 87
D DSK + +RD E++ + R + +K R++D+DR +DR D+ DRE++R D
Sbjct: 265 DSKDSKDRERTRD-EKDKDKDRSERGDKDREKDKDRHKDRGERGDKSDGGKDRERARESD 323
Query: 88 MDREKS-RDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYD 142
DRE+S +D +KDRE+D+ RD+ +E+ + S+ R+ + D + +D +RRKD D
Sbjct: 324 KDRERSAKDGDKDRERDK-DRDKEKEKDGKDSKDRERTREGDKEKEKDRERRKDKD 378
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 54 RSREKEKEK-GRDRDRDRDRDRTREKDRDREKS-----RDMDREKSRDREKDREKDRHHR 107
R E +KE+ RD D ++DR+R D+DRE R D +K KDRE+ R +
Sbjct: 223 RPSESDKERVSRDGDSNKDRERG---DKDRESKDGGGGRTKDGDKDSKDSKDRERTRDEK 279
Query: 108 DRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEH---R 164
D+ ++RS ER ++ +++D D H +D R D +DR + R + R RS +
Sbjct: 280 DKDKDRS-ERGDKDREKDKDRH---KDRGERGDKSDGGKDRERARESDKDRERSAKDGDK 335
Query: 165 SRSRSRSRSKSKRISGFD 182
R R + R K K G D
Sbjct: 336 DRERDKDRDKEKEKDGKD 353
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 31 RSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMD 89
R +D + + G +D ER+ R +EKEK+ +DR+R R+ +EK++DRE+ +D D
Sbjct: 320 RESDKDRERSAKDGDKDRERDKDRDKEKEKDGKDSKDRERTREGDKEKEKDRERRKDKD 378
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 40/213 (18%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQV------MAAIGGNTAGPGDAVVNVYINHEKK 294
A R V V L A+E+ + FFS+V + I +G V
Sbjct: 150 AKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGV---------- 199
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRP-SDYNPSLAATLG-PSQPNPNLNLAAV 352
A+VE + E A++++G + + P+KV+ ++ N + AT P PN
Sbjct: 200 -AYVEFYTQESVIKALSVNGYMLKNRPIKVQSSQAEKNRAAKATKHHPIDPN-------- 250
Query: 353 GLTPGSAGGLEGPDRIFVGGL--PYY-FTEAQIRELLESFGPLRGFDLVKDRETGNSKGY 409
+ P ++++GGL P TE ++++L FG + ++ +D TG SKG+
Sbjct: 251 ----------DIPLKLYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGF 300
Query: 410 AFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 442
F + S A +NG+++ + + V A
Sbjct: 301 GFIQFHKASEAIEAMTVMNGMEVAGREIKVSYA 333
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 33/219 (15%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP---GDAVVNVYINHEKKFAFVE 299
R R V+V L + + FF + AGP V + N K +VE
Sbjct: 227 RDRRTVFVQQLAARLRTRELKEFFEK---------AGPVAEAQIVKDRVSNRSKGVGYVE 277
Query: 300 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 359
+S E + A+ L G G P+ V+ A T PN +V
Sbjct: 278 FKSEESVAAALQLTGQKLLGIPIIVQPTEAEKNRQARTTSGHHPN------SVPF----- 326
Query: 360 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
R++VG + + TE ++ + E FG L L KD E G S+GY F ++D +
Sbjct: 327 ------HRLYVGNIHFSITETDLQHVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAAN 379
Query: 420 TDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 458
A +NG + + + R G ++ PE + LL
Sbjct: 380 AREALEKMNGFDLAGRPI---RVGLGNDKFTPESTANLL 415
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ + A+E+ V FFS+ +++ K ++E
Sbjct: 220 RDQRTVFAYQISLKADERDVYEFFSRA------GKVRDVRLIMDRNSRRSKGVGYIEFYD 273
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
V A+AL G G PV V+ PS+ +L Q ++ GL +GG
Sbjct: 274 VMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSTTSVANGLTGLIGPYSGGA 326
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
+++VG L TEA IR + E+FG + L D E+G+ KG+ F + L
Sbjct: 327 R---KLYVGNLHVSITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARN 382
Query: 423 ACAALNG-IKMGDKTLTV 439
A +LNG +++G +T+ V
Sbjct: 383 A-QSLNGQLEIGGRTIKV 399
>gi|83314969|ref|XP_730591.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490359|gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium yoelii yoelii]
Length = 931
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 8/134 (5%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH 105
RD RE R R +E EK R+R+ ++DR+R E+DR+RE RD +RE RDR ++ E+DR+
Sbjct: 653 RDRNREVERDRNREVEKDRNREVEKDRNREVERDRNREVERDRNRETERDRNREVERDRN 712
Query: 106 ---HRDRHRERSRERS---ERRKDRDDD-DHYRSRDYDRRKDYDRDREDRHKRRSQSRSR 158
RDR+RE R+R+ ER ++R+ + D R + DR ++ +RDR +R R ++R
Sbjct: 713 REVERDRNRETERDRNREVERDRNRETERDRNREVERDRNREVERDR-NRETGRDRNRET 771
Query: 159 GRSEHRSRSRSRSR 172
GR +R R R+R
Sbjct: 772 GRDRNREVERDRNR 785
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 15/161 (9%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH 105
RD RE R R +E E+ R+R+ +RDR+R E+DR+RE RD +RE RDR ++ E+DR+
Sbjct: 701 RDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDRNREVERDRNREVERDRN 760
Query: 106 H---RDRHRERSRERS---ERRKDRDDDDHYRSRDYDRRKDYDRDRED-RHKRRSQSRSR 158
RDR+RE R+R+ ER ++R+ +D +R + DR+RE R + R R R
Sbjct: 761 RETGRDRNRETGRDRNREVERDRNRE-----MEKDRNREVEKDRNRETGRDRNRETGRDR 815
Query: 159 GRSEHRSRSRSRSRSKSKRIS---GFDMAPPASAMLAAGAG 196
R R R+R R +++ I +M +S G
Sbjct: 816 NREIDRDRNREIDRDRNREIDRDRNREMESESSTTRKRSHG 856
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 12/127 (9%)
Query: 59 EKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH---HRDRHRERSR 115
+KE +R++ R R+R E+DR+RE RD +RE RDR ++ EKDR+ +DR+RE R
Sbjct: 626 QKEIDSERNKKRPRNRETERDRNREVERDRNREVERDRNREVEKDRNREVEKDRNREVER 685
Query: 116 ERS---ERRKDRDDDDHYRSRDYDRRKDYDRDRE-DRHKRRSQSRSRGRSEHRSRSRSRS 171
+R+ ER ++R+ + RD +R + DR+RE +R + R R R R R R+R
Sbjct: 686 DRNREVERDRNRETE-----RDRNREVERDRNREVERDRNRETERDRNREVERDRNRETE 740
Query: 172 RSKSKRI 178
R +++ +
Sbjct: 741 RDRNREV 747
>gi|432887647|ref|XP_004074952.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Oryzias
latipes]
Length = 2690
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 13/117 (11%)
Query: 19 NNNYEYGSSPQ-PRS---ADDHS---DSKPQHGSRDYERESSRSREKEKEKGRDRDRDRD 71
NNN S P+ P+S AD +S D K +H R+ E++ R +E++K RDR++ RD
Sbjct: 618 NNNSHRSSRPETPKSSGRADYNSRCDDDKVRHKERNKEKQ----RVREEDKHRDRNKTRD 673
Query: 72 RDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERR-KDRDDD 127
RD+++E + RE D DR K R+++KDREK+ D+ R R +++ R K RD D
Sbjct: 674 RDKSKEVEGPREAEIDKDRHKDREQDKDREKESIE-DKTRSRDKDKGRNRDKIRDVD 729
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
Query: 31 RSADDHSD-SKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMD 89
R D H D +K + + E E R E +K++ +DR++D+DR+ +E D+ +SRD D
Sbjct: 660 REEDKHRDRNKTRDRDKSKEVEGPREAEIDKDRHKDREQDKDRE--KESIEDKTRSRDKD 717
Query: 90 REKSRDREKDREK-------------DRHHRDRHRERSRERSERRKDRDDDDHYRSRDYD 136
+ ++RD+ +D +K HR+R + + R+R+ +RK ++D D S D +
Sbjct: 718 KGRNRDKIRDVDKPREKEKDKEREKDKDRHRERTKGKERDRNRKRKTKEDPDK-TSPDQN 776
Query: 137 RRKDYDRDREDRHK 150
+ D D RH+
Sbjct: 777 PKPDKPSDLNGRHR 790
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 21 NYEYGSSP----QPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTR 76
N + G+ P QP ++ + S S SR ++ES R + + E R DR D R
Sbjct: 543 NKDVGNRPAIIKQPPNSAEKSLSGGPPESRRLKQESQRVSKPKHESNRGHSNDRRSDMVR 602
Query: 77 -------------EKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKD 123
EK+ + +S + KS R + + RH+ER++E+ R++
Sbjct: 603 QKHDQHSNSLHKEEKNNNSHRSSRPETPKSSGRADYNSRCDDDKVRHKERNKEKQRVREE 662
Query: 124 RDDDDHYRSRDYDRRKDYDRDRE-----DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
D ++RD D+ K+ + RE DRHK R Q + R + ++RSR + K
Sbjct: 663 DKHRDRNKTRDRDKSKEVEGPREAEIDKDRHKDREQDKDREKESIEDKTRSRDKDK 718
>gi|126314555|ref|XP_001362188.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Monodelphis
domestica]
Length = 715
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 11/107 (10%)
Query: 36 HSDSKPQHGSRDYERESSRSR----EKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDRE 91
H D + + S +R +SR R E + E+ + RD+DR+R+++ KD DRE+ +D DR+
Sbjct: 162 HKDKEDRRISEIKDRSTSRERKIKEESKDEENKPRDKDREREKS--KDGDRERHKDPDRD 219
Query: 92 KSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRR 138
K +D E+DR K+R ++R RE+SR+ KDR + D RD +R+
Sbjct: 220 KGKDVERDRNKNRVKQEREREKSRD-----KDRGNKDRELERDKERK 261
>gi|221052874|ref|XP_002261160.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247164|emb|CAQ38348.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 971
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 40 KPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKD 99
+P+ RD RE+ R R +E E+ R R+ +RDR R E+DR RE RD RE RDR ++
Sbjct: 675 RPREAERDRPREAERDRPREAERDRPREAERDRPREAERDRQREAERDRQREAERDRPRE 734
Query: 100 REKDRH---HRDRHRERSRER---SERRKDRD-DDDHYRSRDYDRRKDYDRDRE 146
E+DR RDR RE R+R +ER + R+ + D R + DR+++ +RDR+
Sbjct: 735 AERDRQREAERDRQREAERDRQREAERDRQREAERDRQREAERDRQREAERDRQ 788
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K ++E V A+AL G G PV V+ PS+ NL +
Sbjct: 267 KGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSTT 312
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
+ GS G R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F
Sbjct: 313 TVNAGSGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGIVELVQLPLD-ETGHCKGFGFV 371
Query: 413 VYQDL 417
+ L
Sbjct: 372 QFARL 376
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ + A+E+ V FFS+ +++ K ++E
Sbjct: 223 RDQRAVFAYQISLKADERDVFEFFSRA------GKVRDVRLIMDRNSRRSKGVGYIEFYD 276
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
V A+AL G G PV V+ PS+ NL + + G G L
Sbjct: 277 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSTTSVANGLTG-L 321
Query: 363 EGP-----DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 417
GP +++VG L TEA IR + E+FG + L D E+G+ KG+ F + L
Sbjct: 322 IGPYSGGARKLYVGNLHISITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARL 380
Query: 418 SVTDIACAALNG-IKMGDKTLTV 439
A +LNG +++G +T+ V
Sbjct: 381 EDARNA-QSLNGQLEIGGRTIKV 402
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Query: 35 DHSDSKPQHGSRDYE--RESSRSREKEK----------EKGRDRDRDRDRDRTREKD--R 80
D D K + GSRD E RE R++EK EK R++D RD ++ REKD R
Sbjct: 69 DRDDGKEKDGSRDREKVREKDEGRDREKVREKDGGRSREKVREKDEGRDPEKVREKDEGR 128
Query: 81 DREKSRDMDREKSRDREKDREKDRHHRDRHRER 113
DREK R+ D SRDR+K REK+R RDR ER
Sbjct: 129 DREKIREKD--SSRDRDKVREKERDGRDRLMER 159
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 34 DDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKD--RDREKSRDMDRE 91
D+ +P+ G D ER S ++++ G+++D RDR++ REKD RDREK R+ D
Sbjct: 45 DERGSKRPRSGE-DRERHRSSREHRDRDDGKEKDGSRDREKVREKDEGRDREKVREKD-- 101
Query: 92 KSRDREKDREKDRHHRDRHRERSRERSE---RRKDRDDDDHYRSRDYDRRKDYDRDREDR 148
R REK REKD R E+ RE+ E R K R+ D SRD D+ ++ +RD DR
Sbjct: 102 GGRSREKVREKDEG---RDPEKVREKDEGRDREKIREKDS---SRDRDKVREKERDGRDR 155
Query: 149 HKRR 152
R
Sbjct: 156 LMER 159
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 74/187 (39%), Gaps = 24/187 (12%)
Query: 243 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 302
R R V+ L A+E+ V FFS+ +++ K ++E
Sbjct: 219 RDQRTVFAFQLSLKADERDVYEFFSR------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 272
Query: 303 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 362
V A+AL G G V V+ PS+ +LA Q N AA G
Sbjct: 273 VMSVPMAIALTGQPLLGQAVMVK-PSEAEKNLA------QSNAASGGAASGGAR------ 319
Query: 363 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 422
+++VG L TE Q+R++ E FG + L D TG KG+ F + L
Sbjct: 320 ----KLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAK- 374
Query: 423 ACAALNG 429
A +LNG
Sbjct: 375 AAQSLNG 381
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 49 ERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH-R 107
ER S R R E DR+R R +DRD K +D R++ + REKD +DR R
Sbjct: 46 ERGSKRPRSGE-------DRERHRSSREHRDRDDGKEKDGSRDREKVREKDEGRDREKVR 98
Query: 108 DRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRS 167
++ RSRE+ + + D + R +D R DR K R + SR R + R +
Sbjct: 99 EKDGGRSREKVREKDEGRDPEKVREKDEGR---------DREKIREKDSSRDRDKVREKE 149
Query: 168 R 168
R
Sbjct: 150 R 150
>gi|126314557|ref|XP_001362270.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Monodelphis
domestica]
Length = 648
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 11/107 (10%)
Query: 36 HSDSKPQHGSRDYERESSRSR----EKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDRE 91
H D + + S +R +SR R E + E+ + RD+DR+R+++ KD DRE+ +D DR+
Sbjct: 162 HKDKEDRRISEIKDRSTSRERKIKEESKDEENKPRDKDREREKS--KDGDRERHKDPDRD 219
Query: 92 KSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRR 138
K +D E+DR K+R ++R RE+SR+ KDR + D RD +R+
Sbjct: 220 KGKDVERDRNKNRVKQEREREKSRD-----KDRGNKDRELERDKERK 261
>gi|195572230|ref|XP_002104099.1| GD18627 [Drosophila simulans]
gi|194200026|gb|EDX13602.1| GD18627 [Drosophila simulans]
Length = 899
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 13/63 (20%)
Query: 54 RSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRER 113
R ++KEKE+ DRDRD+++EKDRDREKS +EK RDR+K +EKD RDR ++
Sbjct: 179 RVKDKEKER------DRDRDKSKEKDRDREKS----KEKDRDRDKSKEKD---RDRVTDK 225
Query: 114 SRE 116
S+E
Sbjct: 226 SKE 228
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 46 RDYERESSRSREKEKEKGRDRDR----DRDRDRTREKDRDR 82
+D E+E R R+K KEK RDR++ DRDRD+++EKDRDR
Sbjct: 181 KDKEKERDRDRDKSKEKDRDREKSKEKDRDRDKSKEKDRDR 221
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%), Gaps = 5/48 (10%)
Query: 70 RDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRER 117
R +D+ +E+DRDR+KS+ EK RDREK +EKDR RD+ +E+ R+R
Sbjct: 179 RVKDKEKERDRDRDKSK----EKDRDREKSKEKDR-DRDKSKEKDRDR 221
>gi|301610223|ref|XP_002934650.1| PREDICTED: hypothetical protein LOC100495464 [Xenopus (Silurana)
tropicalis]
Length = 559
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 97/149 (65%), Gaps = 19/149 (12%)
Query: 45 SRDYER---ESSRSREKEKEKGRDRDRDR------DRDRTR--EKDRDREKSRDMDREKS 93
S+D ER + SRS+++++++G+DRDR R DR R+R E+DR RE +R DR+++
Sbjct: 391 SKDKERNKEKRSRSKDRQRDRGQDRDRSREGYRGQDRARSREGERDRSREGNRGQDRDRN 450
Query: 94 RDREKDREKDRH---HRDRHRERSRERS---ERRKDRD-DDDHYRSRDYDRRKDYDRDR- 145
R+ + +++DR R+R RER+R+RS R +DRD + + YR +D DR ++ DR+R
Sbjct: 451 REGYRGQDRDRSPEGDRERSRERNRDRSREGNRGQDRDRNQEGYRGQDRDRSREGDRERS 510
Query: 146 EDRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
+++++ R Q R R R +R + R R R++
Sbjct: 511 KEKNRGRGQDRDRNREGYRGQDRDRDRNR 539
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 103/170 (60%), Gaps = 19/170 (11%)
Query: 20 NNYEYGSSP-QPRSADDHSDSKPQHGSRDYERESSR----------SREKEKEKGRDRDR 68
NNY+ G+S + R+ + S SK + R +R+ SR SRE E+++ R+ +R
Sbjct: 384 NNYDCGNSKDKERNKEKRSRSKDRQRDRGQDRDRSREGYRGQDRARSREGERDRSREGNR 443
Query: 69 DRDRDRTRE--KDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRD- 125
+DRDR RE + +DR++S + DRE+SR+R +DR ++ +R + R+R++E R +DRD
Sbjct: 444 GQDRDRNREGYRGQDRDRSPEGDRERSRERNRDRSRE-GNRGQDRDRNQE-GYRGQDRDR 501
Query: 126 --DDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRS 173
+ D RS++ +R + DRDR +R R Q R R R+ ++RS+ R RS
Sbjct: 502 SREGDRERSKEKNRGRGQDRDR-NREGYRGQDRDRDRNRGQNRSQERDRS 550
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 14/115 (12%)
Query: 44 GSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSR--DREKDRE 101
G R +R+ S ++E+ + R+RDR R+ +R +++DR++E R DR++SR DRE+ +E
Sbjct: 453 GYRGQDRDRSPEGDRERSRERNRDRSREGNRGQDRDRNQEGYRGQDRDRSREGDRERSKE 512
Query: 102 KDR---HHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDR-HKRR 152
K+R RDR+RE R +DRD D R+R +R ++ DR +DR HKRR
Sbjct: 513 KNRGRGQDRDRNRE-----GYRGQDRDRD---RNRGQNRSQERDRSHQDRDHKRR 559
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 25/135 (18%)
Query: 47 DYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH 106
+Y+ +S+ +E+ KEK R R +DR RDR +++DR RE R DR +SR+ E+DR ++ +
Sbjct: 385 NYDCGNSKDKERNKEK-RSRSKDRQRDRGQDRDRSREGYRGQDRARSREGERDRSRE-GN 442
Query: 107 RDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSR 166
R + R+R+RE YR +D DR + DR+R SR R+ RSR
Sbjct: 443 RGQDRDRNRE------------GYRGQDRDRSPEGDRER-----------SRERNRDRSR 479
Query: 167 SRSRSRSKSKRISGF 181
+R + + + G+
Sbjct: 480 EGNRGQDRDRNQEGY 494
>gi|301605148|ref|XP_002932194.1| PREDICTED: hypothetical protein LOC100170167 [Xenopus (Silurana)
tropicalis]
Length = 502
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 29/162 (17%)
Query: 42 QHGSRDYERESSRSRE--------KEKEKGRDRDRDRDRDRTREKDRDREKSRDMDRE-- 91
HG+ ++RE R +E KEK++ R +R +R R++ ++R R +SR DR+
Sbjct: 273 HHGTSSFDRELEREKERQRLERESKEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKAD 332
Query: 92 -KSRDREKDREKDR------------HHRDRHRERSRE--RSERRKDRDDDDHYRSRDYD 136
+ RD+EK+ E+ R DR R+RS+E RS+ +KDR+D H RD
Sbjct: 333 RRERDKEKENERSRKRDYDKKGNGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSR 392
Query: 137 RRKDYDRDR-EDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
+ + + R R +DR +R+S+S S+ S SR+RSRS+ +S R
Sbjct: 393 KERRHSRSRSKDRKQRKSKSPSKNAS---SRARSRSKERSNR 431
>gi|384249020|gb|EIE22503.1| hypothetical protein COCSUDRAFT_56177 [Coccomyxa subellipsoidea
C-169]
Length = 2243
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 23 EYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDR 82
E G+ + +S D D S D E + K KEK +DRDR++D+++ REKDRDR
Sbjct: 707 EGGARKKSKSDQDKDDRHKDRKSHDREGGHKEKKRKHKEKDKDRDREKDKEKDREKDRDR 766
Query: 83 EKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRR---K 139
+ +D R+K R + + + DR +++ RER S R KDR+ D + + +
Sbjct: 767 DIGKDRSRDKERTKALEADGDRDRKEKQRERD---SRREKDREKDREKERQREREKEKVR 823
Query: 140 DYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
D +R E H+ + SR RS +SR + +++
Sbjct: 824 DRERAAEKSHRSEREKESR-RSVEALKSRDQEQAQ 857
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 50/178 (28%)
Query: 50 RESSRSREKEKEKGRDRD--RDRDRDRTREK------DRDR-EKSRDMDREKSRDREKD- 99
R+ + +EK++EK RDRD +DR RD+ R K DRDR EK R+ D + +DREKD
Sbjct: 750 RDREKDKEKDREKDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRREKDREKDR 809
Query: 100 -----------------REKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYD 142
R ++ HR + SR E K RD + RS++ R +
Sbjct: 810 EKERQREREKEKVRDRERAAEKSHRSEREKESRRSVEALKSRDQEQAQRSKEAPRDRRDR 869
Query: 143 R-------------DREDRHKRRSQSRSR---GRSEHR-------SRSRSRSRSKSKR 177
D D +R S SR+R GR E R + +++R R +++R
Sbjct: 870 SREDDQRDRRSARPDAVDTARRTSDSRARSRPGREESRPSREPQPAPAKARGREETRR 927
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 20/125 (16%)
Query: 35 DHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDRE------KSRDM 88
D +SK +H +E K+ + +D+D DR +DR K DRE K +
Sbjct: 689 DEGNSKRKHEPVRWEPGQEGGARKKSKSDQDKD-DRHKDR---KSHDREGGHKEKKRKHK 744
Query: 89 DREKSRDREKDREKDRHHRDRHRERSRERS---ERRK------DRDDDDHYRSRDYDRRK 139
+++K RDREKD+EKDR +DR R+ ++RS ER K DRD + R RD R K
Sbjct: 745 EKDKDRDREKDKEKDRE-KDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRREK 803
Query: 140 DYDRD 144
D ++D
Sbjct: 804 DREKD 808
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 88/225 (39%), Gaps = 67/225 (29%)
Query: 2 ADYEVNGEDVDNNNNNNNNNYEYGSSPQPRSADD---HSDS------------------- 39
+D +V G D N NN + ++GS QPR + H+D+
Sbjct: 582 SDEDVAG-DTGANGGQNNADEQWGSDAQPRWEGEEAAHADADHRWNPAIKGLAPQAAADD 640
Query: 40 ----------KPQHGSRDYERESSRSREKEKEKGRDR-----DRDRDRD-----RTREKD 79
P H S + E + + G D+ DR RD R E
Sbjct: 641 DNMLDKMLADTPDHFSEEEEPQLDAGARSAENGGHDKHTSTSDRGNSRDEGNSKRKHEPV 700
Query: 80 RDREKSRDMDREKSR-DREKD-REKDRHHRDRH--------------RERSRER---SER 120
R R+KS+ D++KD R KDR DR ++R RE+ +R
Sbjct: 701 RWEPGQEGGARKKSKSDQDKDDRHKDRKSHDREGGHKEKKRKHKEKDKDRDREKDKEKDR 760
Query: 121 RKDRD-DDDHYRSRDYDRRK----DYDRDREDRHKRRSQSRSRGR 160
KDRD D RSRD +R K D DRDR+++ + R R + R
Sbjct: 761 EKDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRREKDR 805
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ ES+GP++ L+ D+ TG KGYAF Y A
Sbjct: 140 LFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 200 DGRKIDGRRVLV 211
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ E++GP++ L+ D+ET +GYAF Y A
Sbjct: 140 LFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMKAAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ ++ + V
Sbjct: 200 DGRKLDNRRVLV 211
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ ES+GP++ LV D++T +GYAF Y A
Sbjct: 143 LFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQA 202
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 203 DGRKIDGRRVLV 214
>gi|124513290|ref|XP_001350001.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23615418|emb|CAD52409.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 527
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN--VYINHEK---KF 295
+TR RR+Y G LP A F +++ D +N +Y+ K +
Sbjct: 236 STRKLRRLYFGNLPLHLGLSENA--FQEIVWNEMKKRKYCNDENINPVLYVWFAKDKGNY 293
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDY 330
FVE +VEE A+ +DG+I +G +KV RP+DY
Sbjct: 294 GFVEFATVEETERALTMDGMICKGVALKVSRPNDY 328
>gi|41054766|ref|NP_956894.1| TRAF3-interacting protein 1 [Danio rerio]
gi|82187293|sp|Q6PGZ3.1|MIPT3_DANRE RecName: Full=TRAF3-interacting protein 1
gi|34783761|gb|AAH56776.1| TNF receptor-associated factor 3 interacting protein 1 [Danio
rerio]
Length = 629
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Query: 61 EKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH-HRDRHRERSRER 117
+KGR+R+R +DRDR ++K RDREK D REK R+REKDR +++ RD+ R++ +ER
Sbjct: 201 DKGRERERTKDRDRDKDKSRDREK--DKTREKEREREKDRNREKERERDKDRDKKKER 256
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 6/57 (10%)
Query: 69 DRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRD 125
D+ R+R R KDRDR+K + DREK + REK+RE++ +DR+RE+ RER KDRD
Sbjct: 201 DKGRERERTKDRDRDKDKSRDREKDKTREKERERE---KDRNREKERERD---KDRD 251
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDRE 101
R+ ER R R+K+K + R++D+ R+++R REKDR+REK R +R+K RD++K+RE
Sbjct: 204 RERERTKDRDRDKDKSRDREKDKTREKEREREKDRNREKER--ERDKDRDKKKERE 257
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 27/79 (34%)
Query: 67 DRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDD 126
D+ R+R+RT+++DRD++KSRD +++K+R++E++REKDR+ RE+ RER
Sbjct: 201 DKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDRN-----REKERER--------- 246
Query: 127 DDHYRSRDYDRRKDYDRDR 145
D DRD+
Sbjct: 247 -------------DKDRDK 252
>gi|159461692|gb|ABW96885.1| Elipsa [Danio rerio]
Length = 629
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Query: 61 EKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH-HRDRHRERSRER 117
+KGR+R+R +DRDR ++K RDREK D REK R+REKDR +++ RD+ R++ +ER
Sbjct: 201 DKGRERERTKDRDRDKDKSRDREK--DKTREKEREREKDRNREKERERDKDRDKKKER 256
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 6/57 (10%)
Query: 69 DRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRD 125
D+ R+R R KDRDR+K + DREK + REK+RE++ +DR+RE+ RER KDRD
Sbjct: 201 DKGRERERTKDRDRDKDKSRDREKDKTREKERERE---KDRNREKERERD---KDRD 251
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDRE 101
R+ ER R R+K+K + R++D+ R+++R REKDR+REK R +R+K RD++K+RE
Sbjct: 204 RERERTKDRDRDKDKSRDREKDKTREKEREREKDRNREKER--ERDKDRDKKKERE 257
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 27/79 (34%)
Query: 67 DRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDD 126
D+ R+R+RT+++DRD++KSRD +++K+R++E++REKDR+ RE+ RER
Sbjct: 201 DKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDRN-----REKERER--------- 246
Query: 127 DDHYRSRDYDRRKDYDRDR 145
D DRD+
Sbjct: 247 -------------DKDRDK 252
>gi|83273743|ref|XP_729532.1| 19096-22891 [Plasmodium yoelii yoelii 17XNL]
gi|23487609|gb|EAA21097.1| 19096-22891 [Plasmodium yoelii yoelii]
Length = 546
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 241 ATRHARRVYVGGLPPTA--NEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK-KFAF 297
+TR RR+Y G LP E + M + V+ V+ +K + F
Sbjct: 255 STRKLRRLYFGNLPLHLGLTENAFQEIVWDEMKKRKFCNNENINPVLYVWFAKDKGNYGF 314
Query: 298 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA---TLGPSQPNPNLNLAAVG 353
VE +VEE A+ +DG++ +G +K+ RP+DY+ S + ++ N NL LAA+
Sbjct: 315 VEFSTVEETEKALTMDGMLCKGIAIKISRPNDYSTSSVKNNQNILMNKQNVNL-LAAIS 372
>gi|70941972|ref|XP_741209.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519442|emb|CAH74487.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 635
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 12/105 (11%)
Query: 64 RDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKD 123
RDR+R+ DRDR RE DRDR + D DR + DR+++RE D RDR+RE R+R+ R D
Sbjct: 518 RDRNREFDRDRNREFDRDRNREFDRDRNREMDRDRNREMD---RDRNREMDRDRN-REMD 573
Query: 124 RD-----DDDHYRSRDYDRRKDYDRDRE---DRHKRRSQSRSRGR 160
RD D D R D DR +++DRDR DR + R R R R
Sbjct: 574 RDRNREMDRDRNREVDRDRNREFDRDRNREFDRDRNREFDRDRNR 618
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 69/105 (65%), Gaps = 21/105 (20%)
Query: 45 SRDYERESSRS--REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSR--DREKDR 100
+R+++R+ +R R++ +E RDR+R+ DRDR RE DRDR +R+MDR+++R DR+++R
Sbjct: 529 NREFDRDRNREFDRDRNREMDRDRNREMDRDRNREMDRDR--NREMDRDRNREMDRDRNR 586
Query: 101 EKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDR 145
E D RDR+RE R+R+ R D DR +++DRDR
Sbjct: 587 EVD---RDRNREFDRDRN------------REFDRDRNREFDRDR 616
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH 105
RD RE R R +E ++ R+R+ DRDR+R ++DR+RE RD +RE RDR ++ ++DR+
Sbjct: 542 RDRNREMDRDRNREMDRDRNREMDRDRNREMDRDRNREMDRDRNREVDRDRNREFDRDRN 601
Query: 106 H---RDRHRERSRERS 118
RDR+RE R+R+
Sbjct: 602 REFDRDRNREFDRDRN 617
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH 105
RD RE R R +E ++ R+R+ DRDR+R ++DR+RE RD +RE RDR ++ ++DR+
Sbjct: 550 RDRNREMDRDRNREMDRDRNREMDRDRNREMDRDRNREVDRDRNREFDRDRNREFDRDRN 609
Query: 106 H---RDRHRE 112
RDR+RE
Sbjct: 610 REFDRDRNRE 619
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 80/144 (55%), Gaps = 28/144 (19%)
Query: 59 EKEKGRDRDRDRDRDRTREKDR--------------DREKSRDMDREKSR--DREKDREK 102
E++K R R+R+ DRDR RE DR DR+++R+ DR+++R DR+++RE
Sbjct: 481 ERDKKRARNREMDRDRNREMDRDRNRDFDRDRNREFDRDRNREFDRDRNREFDRDRNREF 540
Query: 103 DRHHRDRHRERSRERSERRKDRD-----DDDHYRSRDYDRRKDYDRDRE---DRHKRRSQ 154
D RDR+RE R+R+ R DRD D D R D DR ++ DRDR DR + R
Sbjct: 541 D---RDRNREMDRDRN-REMDRDRNREMDRDRNREMDRDRNREMDRDRNREVDRDRNREF 596
Query: 155 SRSRGRSEHRSRSRSRSRSKSKRI 178
R R R R R+R R +++ +
Sbjct: 597 DRDRNREFDRDRNREFDRDRNREM 620
>gi|255564007|ref|XP_002523003.1| nuclear inhibitor of protein phosphatase-1, putative [Ricinus
communis]
gi|223537815|gb|EEF39433.1| nuclear inhibitor of protein phosphatase-1, putative [Ricinus
communis]
Length = 372
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 4 YEVNGEDVDNNNNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKG 63
Y+ NG D DN N S P DD+SDSK QH SRD+ER+SS+SREKE+EKG
Sbjct: 9 YQRNGTDFDNGNYGGGG-----GSSPPPRVDDYSDSKSQHRSRDHERDSSKSREKEREKG 63
>gi|403220964|dbj|BAM39097.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 463
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 241 ATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDA----VVNVYINHEK-KF 295
+TR RR+Y G LP N T F ++ N D V+ V+ +K +
Sbjct: 226 STRKLRRLYFGNLP--VNTGLTETGFQNLIWNEMRNRNFCNDPNVSPVLYVWFAKDKGNY 283
Query: 296 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS 333
FVE SVEE A+ +DG+ G ++V RP+DY+ +
Sbjct: 284 GFVEFASVEETERALTMDGMTCMGVQLRVSRPNDYSST 321
>gi|195375174|ref|XP_002046378.1| GJ12538 [Drosophila virilis]
gi|194153536|gb|EDW68720.1| GJ12538 [Drosophila virilis]
Length = 1083
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 11/148 (7%)
Query: 37 SDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSR----DMDREK 92
S +P+ R ER S+ R++ KE+ R ++R R +++ R KDR R K R + R K
Sbjct: 469 SKERPKERQRSKERPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSK 528
Query: 93 SRDREKDREKDRHH-RDRHRERSRER---SERRKDRDDDDHYRSRDYDRRKDYDRDRE-- 146
R R K+R + + R + R+RS+ER ER+K+R + RS+ +R K+ R +E
Sbjct: 529 ERQRSKERLRSKERVRSKERQRSKERVRSKERQKER-SAERQRSKVKERSKERQRSKERV 587
Query: 147 DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
R K R +S+ R RS+ R RS+ R +SK
Sbjct: 588 QRSKERQRSKERLRSKDRQRSKERQKSK 615
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
Query: 15 NNNNNNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDR 74
N+++ E+ +S + +S + + + P+ R+ ER+ S+ R++ K++ ++R R ++R
Sbjct: 374 NDSSTEKREHSASRRHKSKERPTRTPPR---RETERQRSKERQRSKQRAGSKERKRSKER 430
Query: 75 TREKDRDREKSRDM--DREKSRDREKDREKDR-------HHRDRHRERSRERSERRKDRD 125
E+ R +E+ R + +R+KS+DR + +E+ + R + R+RS+ER ++ +
Sbjct: 431 RSERQRSKERQRSLGKERQKSKDRARSKERQKSKERQRSKERPKERQRSKERPRSKERQR 490
Query: 126 DDDHYRSRDYDRRKDYDRDREDRHKRRSQSRS--RGRSEHRSRSRSRSRSK 174
+ RS++ R K+ R + DRH+ + + RS R RS+ R RS+ R RSK
Sbjct: 491 SKERLRSKERLRSKEKPRSK-DRHRSKERQRSVERPRSKERQRSKERLRSK 540
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 17/126 (13%)
Query: 26 SSPQPRSADDHSDSKPQHG---SRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDR 82
S +PRS D H + Q R ER+ S+ R + KE+ R ++R R ++R R K+R +
Sbjct: 503 SKEKPRSKDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKERQRSKERVRSKERQK 562
Query: 83 EKSRDMDREKSRDREKDRE--KDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKD 140
E+S + R K ++R K+R+ K+R R + R+RS+ER RS+D R K+
Sbjct: 563 ERSAERQRSKVKERSKERQRSKERVQRSKERQRSKER------------LRSKDRQRSKE 610
Query: 141 YDRDRE 146
+ +E
Sbjct: 611 RQKSKE 616
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 58 KEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH-RDRHRERSRE 116
+E E+ R ++R R + R K+R R K R +R++S++R++ K+R +DR R + R+
Sbjct: 402 RETERQRSKERQRSKQRAGSKERKRSKERRSERQRSKERQRSLGKERQKSKDRARSKERQ 461
Query: 117 RSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSK 176
+S+ R+ + R R +R + +R R K R +S+ R RS+ + RS+ R RSK +
Sbjct: 462 KSKERQRSKERPKERQRSKERPRSKER---QRSKERLRSKERLRSKEKPRSKDRHRSKER 518
Query: 177 RIS 179
+ S
Sbjct: 519 QRS 521
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ ES+GP++ LV D++ +GYAF Y A
Sbjct: 143 LFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQA 202
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 203 DGRKIDGRRVLV 214
>gi|145482961|ref|XP_001427503.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394584|emb|CAK60105.1| unnamed protein product [Paramecium tetraurelia]
Length = 709
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 17/124 (13%)
Query: 65 DRDRDRDRDRTREKDRDREKSRDMD-----------REKSRDREK---DREKDRHHRDRH 110
++DR++DRDR R+K++D + R+ R+K R+ K D+++ RD++
Sbjct: 396 NKDREKDRDRQRDKEKDYNRDREKFDKSKYDKKDDHRQKERNESKHDYDKKQKDKERDKN 455
Query: 111 RERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSR---SRGRSEHRSRS 167
RE+S+E+S R DR D + + ++ R D +RDR+ +K+ R ++ RSE RS+
Sbjct: 456 REKSKEKSFERSDRKDRERRKEKERSRGGDKERDRDQNNKKHKDYRRETTKKRSEERSKP 515
Query: 168 RSRS 171
RSRS
Sbjct: 516 RSRS 519
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
Query: 45 SRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR 104
SR +R SR R++ KG DR+ + R R+ K R R SRD DR SRDR R +DR
Sbjct: 381 SRGRDRRHSRGRDRSHSKGGDRNHSKGRGRSHSKGRGRSHSRDKDRSPSRDRSHSRGRDR 440
Query: 105 -HHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEH 163
H + R R SR+R + H R RD +D RS SR R R+
Sbjct: 441 SHSKGRGRSHSRDRGSK--------HSRGRDRSPSRD-----------RSHSRGRDRNHS 481
Query: 164 RSRSRSRSRSKSK 176
R RS+ RS SKS+
Sbjct: 482 RERSKDRSHSKSR 494
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 53 SRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR-HHRDRHR 111
S SR+K++ RDR R RDR+ K R R SRD + SR R++ +DR H R R R
Sbjct: 419 SHSRDKDRSPSRDRSHSRGRDRSHSKGRGRSHSRDRGSKHSRGRDRSPSRDRSHSRGRDR 478
Query: 112 ERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRS 171
SRERS+ R D +S D D K R R RS SR R RS + R S
Sbjct: 479 NHSRERSKDRSHSKSRDRNKSSDRDHYKSRHRSRSRNRADRSHSRGRDRSHCKGRDSSTD 538
Query: 172 RSKSKRI 178
RS + R+
Sbjct: 539 RSHNTRV 545
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 61 EKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR-HHRDRHRERSRERSE 119
++GR R RDR +R +DR K D + K R R + + R H RD+ R SR+RS
Sbjct: 375 DRGRSHSRGRDRRHSRGRDRSHSKGGDRNHSKGRGRSHSKGRGRSHSRDKDRSPSRDRSH 434
Query: 120 RRKDRDDDDHYRSRDYDRRKDYDRDREDRHKR-------RSQSRSRGRSEHRSRSRSRSR 172
R RD RS R + + RDR +H R R +S SRGR + SR RS+ R
Sbjct: 435 SR-GRD-----RSHSKGRGRSHSRDRGSKHSRGRDRSPSRDRSHSRGRDRNHSRERSKDR 488
Query: 173 SKSK 176
S SK
Sbjct: 489 SHSK 492
>gi|156093490|ref|XP_001612784.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801658|gb|EDL43057.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1084
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 41 PQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDR 100
P+ RD R++ R R +E E+ R RD +RDR R E+DR R+ RD RE RDR++D
Sbjct: 761 PRDTERDRPRDTERDRPREAERDRQRDVERDRPRETERDRQRDAERDRPRETERDRQRDA 820
Query: 101 EKDRHHRDRHRERSRER 117
E RDR RE RER
Sbjct: 821 E-----RDRPRETERER 832
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 40 KPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDRE 97
+P+ RD +R+ R R +E E+ R RD +RDR R E+DR R+ RD RE R+R+
Sbjct: 776 RPREAERDRQRDVERDRPRETERDRQRDAERDRPRETERDRQRDAERDRPRETERERQ 833
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E++++ E++GP++ LV D+ET +GYAF Y A
Sbjct: 141 LFVARLNYETSESRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQA 200
Query: 428 NGIKMGDKTLTV 439
+G K+ +K + V
Sbjct: 201 DGRKVDNKRVLV 212
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ ES+GP++ LV D++ +GYAF Y A
Sbjct: 143 LFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQA 202
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 203 DGRKIDGRRVLV 214
>gi|449447601|ref|XP_004141556.1| PREDICTED: uncharacterized protein LOC101207335 [Cucumis sativus]
gi|449522278|ref|XP_004168154.1| PREDICTED: uncharacterized LOC101207335 [Cucumis sativus]
Length = 939
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 20/136 (14%)
Query: 21 NYEYGSSPQPRSADDH----SDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTR 76
++E S+P RS DD ++ +H S D+ R+SSR EK+ R +DR+R +
Sbjct: 2 DWERSSAPDERSGDDFGYSGAEKSSKHRSEDH-RKSSRGEEKDH-----RSKDRERSKRS 55
Query: 77 EKDRDREKSRDMDREKSRDREKDREKDRHHRDRH-RERSRERSERRKDRD-DDDHYRSRD 134
D +EK ++ ++ RDR + REK + RD H +ERSR + KD+D D D Y+ ++
Sbjct: 56 SDDASKEKEKEA-KDSERDRIRSREKRKEDRDEHEKERSRGKV---KDKDYDRDIYKDKE 111
Query: 135 YDRRKDYDRDREDRHK 150
Y+R +RDR+DR K
Sbjct: 112 YER----ERDRKDRGK 123
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 42/51 (82%), Gaps = 4/51 (7%)
Query: 54 RSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR 104
R REKE++ RDR+R+++R++ K+RDREK R+ DREK +++E+++E+D+
Sbjct: 391 RLREKERD----RDREREKERSKNKERDREKDRERDREKDQEKEQEKERDK 437
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Query: 60 KEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSE 119
+EK RDRDR+R+++R++ K+RDREK R+ DREK D+EK++EK+R D+ +E+ RER
Sbjct: 393 REKERDRDREREKERSKNKERDREKDRERDREK--DQEKEQEKER---DKEKEQDRERER 447
Query: 120 RRKDRDDDDHYRSRDYDRR 138
++ + D R +D R
Sbjct: 448 EKERTREIDEKRKKDKKSR 466
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%), Gaps = 6/52 (11%)
Query: 74 RTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRD 125
R REK+RDR++ R+ +E+S+++E+DREKDR +R RE+ +E+ E+ K+RD
Sbjct: 391 RLREKERDRDRERE--KERSKNKERDREKDR---ERDREKDQEK-EQEKERD 436
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ ES+GP++ L+ D+ +GYAF Y A
Sbjct: 140 LFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 200 DGRKLDGRRVLV 211
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 24/144 (16%)
Query: 321 PVKVRRPSDYNPSLAA-TLGPSQPNPNLNL-----------AAVGLTPGSAGGL------ 362
P + RP NP+ AA + Q N + + +AV P A L
Sbjct: 289 PAAIARPVTLNPNSAAYNIATYQMNSGMTVQNVYHTMPLHSSAVHSAPLPAAPLGTAAIA 348
Query: 363 ---EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 419
+ R++VG L + TEA ++ L G + L +R+ G SKGYAF + D
Sbjct: 349 MAAKQQTRVYVGSLDFALTEADVKSLFSPCGEVISVTL--NRDNGKSKGYAFVQFADAGA 406
Query: 420 TDIACAALNGIKMGDKTLTVRRAN 443
+A LNG+++ + L V A
Sbjct: 407 AKLAM-ELNGVEVAGRPLKVNFAT 429
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 229 LPVMPV-QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV 287
LP P+ A A + RVYVG L E V + FS P V++V
Sbjct: 337 LPAAPLGTAAIAMAAKQQTRVYVGSLDFALTEADVKSLFS------------PCGEVISV 384
Query: 288 YINHE----KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSD 329
+N + K +AFV+ A AM L+G+ G P+KV +D
Sbjct: 385 TLNRDNGKSKGYAFVQFADAGAAKLAMELNGVEVAGRPLKVNFATD 430
>gi|198465678|ref|XP_002135021.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
gi|198150268|gb|EDY73648.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
Length = 1099
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH 105
R ER+ S+ R++ K++ R +DR R ++R R K+R R K+R +E+ R +E+ R KD+
Sbjct: 504 RSKERQKSKDRQRSKDRQRSKDRQRSKERQRSKERQRSKARLYSKERLRSKERARSKDKP 563
Query: 106 HRDRHRERS--RERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRG---- 159
+ R+RS R+RS+ RK D + RD + + ++R+ R K R +S+ RG
Sbjct: 564 VVEIKRDRSKDRQRSKERKRSVDKAPSKERDMSKGRQRSKERQ-RSKERRRSKDRGQQSN 622
Query: 160 ---RSEHRSRSRSRSRSK 174
RS+ R RS+ R RSK
Sbjct: 623 EKKRSKERQRSKDRQRSK 640
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 12/138 (8%)
Query: 50 RESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH--- 106
+E R RE+ KE+ R ++R R ++R R K+R R K R +E+ R +E+ + K+R
Sbjct: 424 KEPERKRERSKERFRSKERQRSKERQRSKERLRSKERQRSKERQRSKERPKSKERQRSRE 483
Query: 107 --------RDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSR 158
R + R+RS+ER ++ + D RS+D R KD R +E R + + + RS+
Sbjct: 484 RQRSKERIRSKERQRSKERQRSKERQKSKDRQRSKDRQRSKDRQRSKE-RQRSKERQRSK 542
Query: 159 GRSEHRSRSRSRSRSKSK 176
R + R RS+ R++SK
Sbjct: 543 ARLYSKERLRSKERARSK 560
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 56 REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHR-------D 108
+E+ + K R R ++R R + R+K +DR++S+D R K R R K+R++ + +
Sbjct: 488 KERIRSKERQRSKERQRSKERQKSKDRQRSKDRQRSKDRQRSKERQRSKERQRSKARLYS 547
Query: 109 RHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE-DR--HKRRSQSRSRGRSEHRS 165
+ R RS+ER+ R KD+ + R R DR++ +R R D+ K R S+ R RS+ R
Sbjct: 548 KERLRSKERA-RSKDKPVVEIKRDRSKDRQRSKERKRSVDKAPSKERDMSKGRQRSKERQ 606
Query: 166 RSRSRSRSK 174
RS+ R RSK
Sbjct: 607 RSKERRRSK 615
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Query: 65 DRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDR 124
+R R+R ++R R K+R R K R +E+ R +E+ R K+R R + R +S+ER R+ +
Sbjct: 427 ERKRERSKERFRSKERQRSKERQRSKERLRSKERQRSKERQ-RSKERPKSKERQRSRERQ 485
Query: 125 DDDDHYRSRDYDRRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKRIS 179
+ RS++ R K+ R +E R +S+ R RS+ R RS+ R RSK ++ S
Sbjct: 486 RSKERIRSKERQRSKERQRSKE-----RQKSKDRQRSKDRQRSKDRQRSKERQRS 535
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 22/142 (15%)
Query: 39 SKPQHGSRDYERESSRSREKEKEKGRDRDRDRDR----DRTREKDRDREKSR---DMDRE 91
SK + S+D +R R R KE+++ ++R R + R +R R K+R R K + ++ R+
Sbjct: 511 SKDRQRSKDRQRSKDRQRSKERQRSKERQRSKARLYSKERLRSKERARSKDKPVVEIKRD 570
Query: 92 KSRDREKDREKDRH-----HRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
+S+DR++ +E+ R ++R + R+RS+ R R +RR+ DR ++
Sbjct: 571 RSKDRQRSKERKRSVDKAPSKERDMSKGRQRSK----------ERQRSKERRRSKDRGQQ 620
Query: 147 DRHKRRSQSRSRGRSEHRSRSR 168
K+RS+ R R + RS+ R
Sbjct: 621 SNEKKRSKERQRSKDRQRSKER 642
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 22 YEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRD 81
YE G+ + DHSD++ G+ D R+ + EK++GR+ +R R+R+ R K++D
Sbjct: 2153 YEGGNKEKTPEHPDHSDNRSNRGTDDRRRDRDHTWAWEKDRGRNWNRGREREWERHKEKD 2212
Query: 82 REKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDDD 128
+K+R+ R +R+RE+D E R + ER+RER ++RD D+
Sbjct: 2213 WDKNRE--RGYNRERERDSE-----RGKDWERTRERG---RNRDGDN 2249
>gi|414591752|tpg|DAA42323.1| TPA: hypothetical protein ZEAMMB73_939656 [Zea mays]
Length = 270
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 4 YEVNGEDVDNNNNNNNNNYEYGSSPQPRS------ADDHSD---SKPQHGSRDYERESSR 54
Y+ NG+ Y G+ P S DH+D S+PQH ++ ++ SS+
Sbjct: 8 YQGNGDQATAEGGYAQTEYAAGAGGSPPSDSNPSVFSDHADGRSSQPQHETQSHDSGSSK 67
Query: 55 SREKEKEKGRDRDRDRDRDRTREKD 79
S+E+++E+ + +DR+R RDR REK+
Sbjct: 68 SQERDRERDKGKDRERGRDRVREKE 92
>gi|320589364|gb|EFX01826.1| involucrin repeat protein [Grosmannia clavigera kw1407]
Length = 6207
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 47 DYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH- 105
D ERE+ R R E E+ + D +R+ +R R +R+K D++RE R R+ D EK+R
Sbjct: 770 DLERETERRRLVEAERQKQVDLERETERRRLIQAERQKQLDLERETERQRQADLEKERQR 829
Query: 106 --HRDRHRERSRER 117
RD RER R R
Sbjct: 830 QKERDLERERQRVR 843
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 47 DYERESSRSREKEKEKGRDRDRDRDRDRTR----EKDRDREKSRDMDREKSRDRE 97
D ERE+ R R + E+ + D +R+ +R R EK+R R+K RD++RE+ R RE
Sbjct: 790 DLERETERRRLIQAERQKQLDLERETERQRQADLEKERQRQKERDLERERQRVRE 844
>gi|158289428|ref|XP_001687752.1| AGAP000003-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDR--EKSRDREKDREKD 103
R +RE+ R R++E E+ RDR+ +R RDR E+ RDRE R DR E+ RDRE +R++D
Sbjct: 104 RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRD 163
Query: 104 RH---HRDRHRERSRER-SERRKDRD 125
R RDR ER R+R +ER++DR+
Sbjct: 164 RETERQRDRETERQRDRETERQRDRE 189
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDRE--KSRDREKDREKD 103
R +RE+ R R++E E+ RDR+ +R RDR E+ RDRE R DRE + RDRE +R++D
Sbjct: 112 RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRD 171
Query: 104 RH---HRDRHRERSRER-SERRKDRD 125
R RDR ER R+R +ER++DR+
Sbjct: 172 RETERQRDRETERQRDRETERQRDRE 197
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 19/110 (17%)
Query: 51 ESSRSREKEKEKGRDR------DRD----RDRDRTREKDRDREKSRDMDREKSRDREKDR 100
E+ R R++E E+ RDR DR+ RDR+ R++DR+ E+ RD + E+ RDRE +R
Sbjct: 93 ETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETER 152
Query: 101 EKDRH---HRDRHRERSRER-SERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
++DR RDR ER R+R +ER++DR+ + R DR + RDRE
Sbjct: 153 QRDRETERQRDRETERQRDRETERQRDRETE-----RQRDRETERQRDRE 197
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 14/66 (21%)
Query: 53 SRSREKEKEKGRDRDRDRDRDRTREKDR--------------DREKSRDMDREKSRDREK 98
S+ R +EKEK R++DRD+++++ R+KDR ++E+++D D+E+ +D+EK
Sbjct: 377 SKERIREKEKIREKDRDKEKEKDRDKDRGRERDKERGREREREKERTKDRDKERVKDKEK 436
Query: 99 DREKDR 104
DRE+DR
Sbjct: 437 DRERDR 442
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +++ E++GP++ LV D+ET +GYAF Y A
Sbjct: 141 LFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQA 200
Query: 428 NGIKMGDKTLTV 439
+G K+ ++ + V
Sbjct: 201 DGRKVDNRRVLV 212
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +++ E++GP++ LV D+ET +GYAF Y A
Sbjct: 141 LFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQA 200
Query: 428 NGIKMGDKTLTV 439
+G K+ ++ + V
Sbjct: 201 DGRKVDNRRVLV 212
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +++ E++GP++ LV D+ T +GYAF Y A
Sbjct: 140 LFVARLGYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYAHTRDMKSAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ +K + V
Sbjct: 200 DGRKVDNKRVLV 211
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVG + + +E ++R ES+GP++ ++V D ++G +GYAF Y++ A
Sbjct: 104 LFVGRINFDTSEGKLRREFESYGPVKRINIVSDPKSGKPRGYAFVEYENERDMHSAYKYA 163
Query: 428 NGIKMGDKTLTV 439
+G K+ K + V
Sbjct: 164 DGKKIDGKRVVV 175
>gi|303272315|ref|XP_003055519.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463493|gb|EEH60771.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 394
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 21/160 (13%)
Query: 362 LEGPDR---IFVGGLPYYFTEAQIRELLE-----SFGPLRGFDL--VKDRETGNSKGYAF 411
L GP + IFVG + T+ + L + +F D V + + G+ Y F
Sbjct: 188 LGGPRKNREIFVGNIDAVVTKQALTALFDDALAVAFPNATSGDAKPVVNIQLGDQATYGF 247
Query: 412 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLML 471
+ A A LNG+ + LT+ R G P A ++
Sbjct: 248 VELLSEELATAAIAGLNGLVFCGRPLTIARPT-GWVDPAAAATITARAAAER-------- 298
Query: 472 QPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGK 511
G S +VCL+ +V+ +L D+E Y E+L D+R E K
Sbjct: 299 --GEEHSTIVCLSNIVTESDLADEEAYAELLADVRTECAK 336
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +++ E++GP++ LV D+ T +GYAF Y A
Sbjct: 140 LFVARLNYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYVHTRDMKSAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ +K + V
Sbjct: 200 DGRKVDNKRVLV 211
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 18/137 (13%)
Query: 293 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 352
K ++E V A+AL G + G PV V+ PS+ NL ++
Sbjct: 221 KGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSSA 266
Query: 353 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 412
+ ++GG +++VG L TE Q+R++ E FG + L D TG KG+ F
Sbjct: 267 TSSVAASGGAR---KLYVGNLHANITEDQLRQVFEPFGLVELVQLPVDPLTGLCKGFGFV 323
Query: 413 VYQDLSVTDIACAALNG 429
+ L A +LNG
Sbjct: 324 QFARLEDAK-AAQSLNG 339
>gi|195330360|ref|XP_002031872.1| GM23818 [Drosophila sechellia]
gi|194120815|gb|EDW42858.1| GM23818 [Drosophila sechellia]
Length = 899
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 6/47 (12%)
Query: 56 REKEKEKGRDRDRD----RDRDR--TREKDRDREKSRDMDREKSRDR 96
R K+KEK RDRDRD +DRDR ++EKDRDR+KS++ DR++ D+
Sbjct: 179 RVKDKEKERDRDRDKSKEKDRDREKSKEKDRDRDKSKEKDRDRVTDK 225
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%), Gaps = 5/48 (10%)
Query: 70 RDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRER 117
R +D+ +E+DRDR+KS+ EK RDREK +EKDR RD+ +E+ R+R
Sbjct: 179 RVKDKEKERDRDRDKSK----EKDRDREKSKEKDR-DRDKSKEKDRDR 221
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 36 HSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRD 95
+D++ G + R+ R E+++GR+ +RDRD +R REK+ D K+RD + K RD
Sbjct: 2153 QADNRQGRGFEERRRDREHGRPWERDRGRNWNRDRDWERHREKEWD--KNRDRSQNKDRD 2210
Query: 96 REKDREKDRHHRDRHRERSR 115
++ +R KD R R R+R+R
Sbjct: 2211 KDSERGKD-WERSRDRDRTR 2229
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV + Y TE+++R E++G +R +VKD TG +GYAF + A +
Sbjct: 106 LFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRGYAFVEFDRERDMHTAYKSA 165
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 166 DGKKIDGRRVLV 177
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ ES+G ++ LV D E+ +GYAF Y A
Sbjct: 141 LFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQA 200
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 201 DGRKIEGRRVLV 212
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y TE++I+ ES+G ++ LV D E+ +GYAF Y A
Sbjct: 137 LFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQA 196
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 197 DGRKIEGRRVLV 208
>gi|115477030|ref|NP_001062111.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|42408488|dbj|BAD09668.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|113624080|dbj|BAF24025.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|125561991|gb|EAZ07439.1| hypothetical protein OsI_29693 [Oryza sativa Indica Group]
gi|125603835|gb|EAZ43160.1| hypothetical protein OsJ_27752 [Oryza sativa Japonica Group]
gi|215694980|dbj|BAG90171.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 603
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 345 PNLNLAAVGLTPGSAG----GLEGP--DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLV 398
P N + G+ G G +GP +FVG L ++ T+A + L +GP++
Sbjct: 156 PGGNYGGGPIVVGNGGPAVVGGDGPGGTTLFVGELHWWTTDADLEAELIKYGPVKEVRFF 215
Query: 399 KDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLL 458
++ +G SKGY + D +V A+NG + V A+ + + E + +
Sbjct: 216 DEKASGKSKGYCQVDFYDPAVATACKEAMNGHLFNGRPCVVAFASPNSVRRMGEAQ---V 272
Query: 459 HAQQQIALQRLMLQP 473
QQ ++ Q +QP
Sbjct: 273 KNQQSMSAQTSSMQP 287
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 44 GSRDYERESSRSREKEKEKGRD--RDRDRDRDRTREKDRDREKSRDMDREKSRDREKDRE 101
G D R+ ++ E+++GR+ RDR+RD DR R+ +R REK + D +K+++R +R+
Sbjct: 2185 GFEDRRRDRDHAKPWERDRGRNWSRDRERDWDRNRDWERHREKDSNRDWDKNKERNPNRD 2244
Query: 102 KDRHHRDRHRE 112
KDR +R++E
Sbjct: 2245 KDRES-ERNKE 2254
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 68 RDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH-----RDRHRERSRERSERRK 122
R+R T+EK D +S+ + + R E DR +DR H RDR R SR+R
Sbjct: 2158 RERFEGSTKEKSSDEPESQLSENRQGRGFE-DRRRDRDHAKPWERDRGRNWSRDR----- 2211
Query: 123 DRDDDDHYRSRDYDRRKDYDRDRE-DRHKRRSQSRSRGRSEHRSR 166
+RD D R+RD++R ++ D +R+ D++K R+ +R + R R++
Sbjct: 2212 ERDWD---RNRDWERHREKDSNRDWDKNKERNPNRDKDRESERNK 2253
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 72 RDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERS 114
RDR +EKDRDR K R+ +R+K R+REKD+E+D+ R + RER+
Sbjct: 396 RDRDKEKDRDRGKDRERERDKERNREKDKERDK-ERSKDRERA 437
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 32/93 (34%)
Query: 54 RSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKS-------------------- 93
R +EK++++G+DR+R+RD++R REKD++R+K R DRE++
Sbjct: 398 RDKEKDRDRGKDRERERDKERNREKDKERDKERSKDRERARDKDRDKDKDREKEKEKDKD 457
Query: 94 ------------RDREKDREKDRHHRDRHRERS 114
R++E+++E+D + R R+
Sbjct: 458 KEKDKEEEKDGDREKEREKERDDKRKKIXRSRT 490
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 37/157 (23%)
Query: 194 GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT--QQATRHARRVYVG 251
G G IP A + PN+ L G +P P+ + R VYVG
Sbjct: 139 GVSLGTLGAIPAA-----ALDPNITAL------GEIPQPPIMGNVDPSKIDEIRRTVYVG 187
Query: 252 GL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 306
L T + FF QV + G+ P +FAFVE
Sbjct: 188 NLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP------------TRFAFVEFADQNSV 235
Query: 307 SNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
A+A +G++F P+K+ +P + P AA
Sbjct: 236 PRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 55 SREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKD 99
SRE++ ++ RD DR RD+D R+ DR+RE+S + DRE+ DR K+
Sbjct: 2116 SRERDWDRARDWDRHRDKDSGRDWDRNRERSANRDREREADRGKE 2160
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+F+ + Y TE+++R ES+GP++ + D TG KGYAF Y A
Sbjct: 104 LFIARVNYDTTESKLRREFESYGPIKMISIAHDINTGKPKGYAFIEYAHERDMHSAYKYA 163
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 164 DGKKIDSRRVLV 175
>gi|242034815|ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +I+ E +GP++ LV +++T +GYAF Y A
Sbjct: 140 LFVARLNYETSEQRIKREFEGYGPIKWVRLVTEKDTSKPRGYAFIEYVHTRDMKSAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ +K + V
Sbjct: 200 DGRKVDNKRVLV 211
>gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays]
gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +I+ E +GP++ LV +++T +GYAF Y A A
Sbjct: 140 LFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYPAA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ ++ + V
Sbjct: 200 DGRKVDNRRVLV 211
>gi|195135387|ref|XP_002012114.1| GI16794 [Drosophila mojavensis]
gi|193918378|gb|EDW17245.1| GI16794 [Drosophila mojavensis]
Length = 1128
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 10/136 (7%)
Query: 39 SKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREK 98
SK + S+D R R + KE+++ ++R R ++R R++E+ R +E+ R +R +S++R +
Sbjct: 447 SKERLKSKDRARSMERHKSKERQQSKERQRPKERQRSKERQRSKERQRSKERLRSKERVR 506
Query: 99 DREKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE-DRHKRRSQSRS 157
+E+ R + R RS+ER +R K+R RS++ R K+ R +E R K R +S+
Sbjct: 507 SKER---LRSKERARSKER-QRSKER-----VRSKERLRSKERARSKERQRSKERVRSKE 557
Query: 158 RGRSEHRSRSRSRSRS 173
R RS+ R RS+ R RS
Sbjct: 558 RQRSKDRPRSKERQRS 573
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 17/142 (11%)
Query: 50 RESSRSREKEKEKGRDRDRDRDRD-------RTREKDRDRE------KSRDMDREKSRDR 96
R R RE+ K++ R+R R +D R++E+ R +E ++R M+R KS++R
Sbjct: 409 RSKERQRERSKQRLGSRERQRSKDARRNERHRSKERQRSKERLKSKDRARSMERHKSKER 468
Query: 97 EKDREKDR---HHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE-DRHKRR 152
++ +E+ R R + R+RS+ER ++ + RS++ R K+ R +E R K R
Sbjct: 469 QQSKERQRPKERQRSKERQRSKERQRSKERLRSKERVRSKERLRSKERARSKERQRSKER 528
Query: 153 SQSRSRGRSEHRSRSRSRSRSK 174
+S+ R RS+ R+RS+ R RSK
Sbjct: 529 VRSKERLRSKERARSKERQRSK 550
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 75 TREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDD-DHYRSR 133
TR K+R RE+S+ + R R KD ++ HR + R+RS+ER + KDR + ++S+
Sbjct: 408 TRSKERQRERSKQRLGSRERQRSKDARRNERHRSKERQRSKERL-KSKDRARSMERHKSK 466
Query: 134 DYDRRKDYDRDRE-DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
+ + K+ R +E R K R +S+ R RS+ R RS+ R RSK
Sbjct: 467 ERQQSKERQRPKERQRSKERQRSKERQRSKERLRSKERVRSK 508
>gi|428167652|gb|EKX36608.1| hypothetical protein GUITHDRAFT_117273 [Guillardia theta CCMP2712]
Length = 828
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 229 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA-AIGGNTAGPGDAVVNV 287
+ V Q ++ + RR++VG LP S TF + A+ D+V +V
Sbjct: 367 IGVSGFQLISSDPRKALRRIHVGNLPLG----SSTTFLKHTINNAMQAEKIAISDSVADV 422
Query: 288 YINHE--KKFAFVEMRSVEEASNAMA-LDGII-FEGAPVKVRRPSDYNPSLAATLGPSQP 343
Y+N K+FA VE R+VEE++ +A L+G + G ++ RP + ++ T + P
Sbjct: 423 YVNSSTTKRFALVEFRTVEESNRCIAHLNGKVELFGQLLEFSRPWNEKHNITVT---TIP 479
Query: 344 NPNLN 348
P L+
Sbjct: 480 KPVLD 484
>gi|355784325|gb|EHH65176.1| Death-inducer obliterator 1 [Macaca fascicularis]
Length = 2156
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 55 SREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKD 99
SRE++ ++ R+ DR RD+D +R+ DR+RE+S + DRE+ DR K+
Sbjct: 2039 SRERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADRGKE 2083
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 55 SREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKD 99
SRE++ ++ R+ DR RD+D +R+ DR+RE+S + DRE+ DR K+
Sbjct: 2133 SRERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADRGKE 2177
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 55 SREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKD 99
SRE++ ++ R+ DR RD+D +R+ DR+RE+S + DRE+ DR K+
Sbjct: 2121 SRERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADRGKE 2165
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 55 SREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKD 99
SRE++ ++ R+ DR RD+D +R+ DR+RE+S + DRE+ DR K+
Sbjct: 2121 SRERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADRGKE 2165
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 38 DSKPQHG---SRDYERESSRSREKEKEKGRDRDRDRDR----------DRTREKDRDREK 84
DSKPQ G SR E S ++++E DR RDR++ DR +EK RE+
Sbjct: 2078 DSKPQGGERFSRFEEELGPGSEDRQQELSEDRRRDREKEGLHSSRLPWDRGQEKRWSRER 2137
Query: 85 SRDMDREKSRDREKDREKDRHH-RDRHRERSRER 117
D RE+ RD E+ RE DR RD ER +++
Sbjct: 2138 EWDRGRERERDHERGRESDRSRGRDEEEERPKDQ 2171
>gi|297735173|emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
+FV L Y TE++I+ E++GP++ L+ D+ET +GYAF Y
Sbjct: 140 LFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYM 187
>gi|223647752|gb|ACN10634.1| WD repeat-containing protein 60 [Salmo salar]
Length = 1090
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 28/153 (18%)
Query: 47 DYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDRE-KSRDREKDREKDRH 105
D RE ++ R+ +K++ +DR +D RDRT EK+RD+E+SR+ DR K + K R DR
Sbjct: 71 DGTRERTKPRDTDKDRHQDRRKDGSRDRTGEKERDKERSREQDRVIKGTENVKYRNGDRD 130
Query: 106 HRDRHRER----SRERSE-----------------RRKDRDDDDHYRSRDYDRRKDYDRD 144
RD+ +R +RER + R+ DRD + +D +R
Sbjct: 131 SRDKMHDREEKENRERVKARERDTERTRERERDELRKSDRDKEKEKNKESETAERDSER- 189
Query: 145 REDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
R DR ++R++ R+ G R R R + KR
Sbjct: 190 RSDRDRKRNEERAEG-----GRDRDRGHDREKR 217
>gi|168059277|ref|XP_001781630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666944|gb|EDQ53586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1072
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 17/76 (22%)
Query: 88 MDREKSRDREKD----------REKDRHHRDRH----RERSRERSERRKDRDDDDHYRSR 133
M R+K RDREKD R+K+R HR+R R+ +ER ER++ R DDD +
Sbjct: 1 MGRDKYRDREKDYGDKEHWERERDKERKHREREKRGDRDLEKERDERKRSRRDDDGVEVK 60
Query: 134 DYDR---RKDYDRDRE 146
D ++ RK +RDRE
Sbjct: 61 DKEKERDRKGGERDRE 76
>gi|413925203|gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
gi|413925204|gb|AFW65136.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
Length = 603
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVG L ++ T+A + L +GP++ ++ +G SKGY + D +
Sbjct: 181 LFVGELHWWTTDADLESELSKYGPVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKEGM 240
Query: 428 NGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP 473
NG + V A + + E + + QQ +A Q +QP
Sbjct: 241 NGHTFNGRPCVVAFATPNSVRRMGEAQ---VKNQQAMAAQTSNMQP 283
>gi|357604317|gb|EHJ64132.1| hypothetical protein KGM_04878 [Danaus plexippus]
Length = 873
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 10/67 (14%)
Query: 66 RDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRD 125
RD++RDR+ +K +DRE+S DRE+S D+++DRH D ++R RERSE+ KDR
Sbjct: 89 RDKERDREHRDDKHKDRERS---DRERS-----DKDRDRHKSD--KDRHRERSEKDKDRS 138
Query: 126 DDDHYRS 132
+ D ++S
Sbjct: 139 EKDKHKS 145
>gi|348511511|ref|XP_003443287.1| PREDICTED: TRAF3-interacting protein 1-like [Oreochromis niloticus]
Length = 673
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 52 SSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHR 111
+SRS++KE +GR+ DR+ ++K +R SRD +K D+ K++E R ++
Sbjct: 186 TSRSQDKENREGREHHVDREE---KKKITERSSSRD---QKDPDQPKEQESRRRDGEKEH 239
Query: 112 ERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
R RERSE+ + D H + RD D+ +D +RD++
Sbjct: 240 RRDRERSEKHHRTEQDRHAKDRDKDKSRDRERDKD 274
>gi|449462395|ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212739 [Cucumis sativus]
Length = 699
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVG L ++ T+A++ L +GPL+ ++ +G SKGY + D S +
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGM 281
Query: 428 NGIKMGDKTLTVRRAN 443
NG + V A+
Sbjct: 282 NGHIFNGRPCVVAYAS 297
>gi|348500896|ref|XP_003438007.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Oreochromis
niloticus]
Length = 461
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 78/161 (48%), Gaps = 28/161 (17%)
Query: 31 RSADDHSDSKPQH-GSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMD 89
RSAD + + K H GSRD RS KEKE RD DR++ KDRD K R +
Sbjct: 310 RSADRNRERKRSHSGSRD-----RRSERKEKE------RDGGDDRSKRKDRDHHKDRGTE 358
Query: 90 REKSRDREKDREKD--RHHRDRHRERSRERSERRKDR-----------DDDDHYRSRDYD 136
RE+SRD++ E D RH DR R R +++R ++ R R +
Sbjct: 359 RERSRDKKSRGETDDRRHKDDRERHRDERKAKRSSRSRSRERRHKSGAEEKSRKRERSHS 418
Query: 137 RRKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
R +D +RD E R +RS+S+ R H R S S+ +R
Sbjct: 419 RERDRERDGEQRSHKRSRSKERS---HHQRESSNDHSRHRR 456
>gi|449462397|ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
Length = 697
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVG L ++ T+A++ L +GPL+ ++ +G SKGY + D S +
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGM 281
Query: 428 NGIKMGDKTLTVRRAN 443
NG + V A+
Sbjct: 282 NGHIFNGRPCVVAYAS 297
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
+VE A+AL G G PV V+ PS+ +L Q A L
Sbjct: 225 IGYVEFYDTMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSTTAAAGAGGML 277
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
P S G R++VG L +E +R++ ESFG + + +D ETG KG+ F +
Sbjct: 278 GPYSGGA----RRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQF 332
Query: 415 QDL 417
L
Sbjct: 333 ARL 335
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
+VE A+AL G G PV V+ PS+ +L Q A L
Sbjct: 225 IGYVEFYDTMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSTTAAAGAGGML 277
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
P S G R++VG L +E +R++ ESFG + + +D ETG KG+ F +
Sbjct: 278 GPYSGGA----RRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQF 332
Query: 415 QDL 417
L
Sbjct: 333 ARL 335
>gi|50750469|ref|XP_422008.1| PREDICTED: peptidyl-prolyl cis-trans isomerase G [Gallus gallus]
Length = 750
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 60 KEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSE 119
+E R+ ++D +R++ K R + +S REKSR +E+D + RH R R RS+ER +
Sbjct: 432 RETRRNLEKDDKHNRSKTKKRGKSRSHSKSREKSRSKERDSKHSRHDEKR-RSRSKER-D 489
Query: 120 RRKDRDDDDHYRSRDYDRRKDYDRDRE----DRHKRRSQSRSRGRSEHRSRSRSRSRSKS 175
R KDR+ + HY SR D+ + ++R R R +S+ R +H+SRSR R ++
Sbjct: 490 REKDREKEKHYDSRGRDKERSRSKERSRRAGSRSNERDHRKSKDREKHKSRSREREHARG 549
Query: 176 K 176
K
Sbjct: 550 K 550
>gi|449516543|ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
Length = 697
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVG L ++ T+A++ L +GPL+ ++ +G SKGY + D S +
Sbjct: 222 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGM 281
Query: 428 NGIKMGDKTLTVRRAN 443
NG + V A+
Sbjct: 282 NGHIFNGRPCVVAYAS 297
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV + Y TE +++ E +GP++ LV +++G +GYAF ++ + A
Sbjct: 155 LFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFEHKNDMKTAYKMA 214
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 215 DGRKIEGRRVVV 226
>gi|449506411|ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212739
[Cucumis sativus]
Length = 724
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVG L ++ T+A++ L +GPL+ ++ +G SKGY + D S +
Sbjct: 247 LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGM 306
Query: 428 NGIKMGDKTLTVRRAN 443
NG + V A+
Sbjct: 307 NGHIFNGRPCVVAYAS 322
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +I+ E +GP++ LV +++T +GYAF Y A
Sbjct: 140 LFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ ++ + V
Sbjct: 200 DGRKVDNRRVLV 211
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 8/83 (9%)
Query: 49 ERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDR--EKSRDREKDREKDRH- 105
E E+ S ++ +R RDRD + E+DR R SR+ +R E++RD E+ REKD +
Sbjct: 2391 EPETQASENRQSRGFEERRRDRDHSKPWERDRSRNWSREKERDWERNRDWERHREKDTNR 2450
Query: 106 HRDRHRERS----RER-SERRKD 123
D+++ER+ +ER SER KD
Sbjct: 2451 EWDKNKERNPNKDKERESERNKD 2473
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 44 GSRDYERESSRSREKEKEKGRD--RDRDRDRDRTREKDRDREKSRDMDREKSRDREKDRE 101
G D R+ + E+++GR+ RDR+RD DR R+ +R REK + D +K+++R +R+
Sbjct: 2184 GFEDRRRDRDHGKPWERDRGRNWSRDRERDWDRNRDWERHREKDSNRDWDKNKERNPNRD 2243
Query: 102 KDRHHRDRHRE 112
K+R +R++E
Sbjct: 2244 KERES-ERNKE 2253
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 30/154 (19%)
Query: 26 SSPQPRSADDH-SDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREK 84
S+P P + S+S+ Q S D+ +S E + R R+R T+EK D +
Sbjct: 2116 SAPLPTNVSGQASESESQWPSSDFR--DGKSHEYRNQAFEGRQRERFEGGTKEKSSDEPE 2173
Query: 85 SRDMDREKSRDREKDREKDRHH-----RDRHRERSRERSERRKDRDDDDHYRSRDYDRRK 139
++ + + R E DR +DR H RDR R SR+R RD+DR +
Sbjct: 2174 TQLSENRQGRGFE-DRRRDRDHGKPWERDRGRNWSRDRE--------------RDWDRNR 2218
Query: 140 DYDRDRE-------DRHKRRSQSRSRGRSEHRSR 166
D++R RE D++K R+ +R + R R++
Sbjct: 2219 DWERHREKDSNRDWDKNKERNPNRDKERESERNK 2252
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 44 GSRDYERESSRSREKEKEKGR---DRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDR 100
G+++ + ++ E +GR DR RDRD + E+DR R SRD +R+ R+R+ +R
Sbjct: 2163 GTKEKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRGRNWSRDRERDWDRNRDWER 2222
Query: 101 EKDRHHRDRHRERSRERS-ERRKDRDDDDHYRSRDYDRRKDY 141
HR++ R +++ ER +RD + R+ +R K++
Sbjct: 2223 -----HREKDSNRDWDKNKERNPNRD-----KERESERNKEW 2254
>gi|356523503|ref|XP_003530377.1| PREDICTED: uncharacterized protein LOC100793984 [Glycine max]
Length = 882
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 14/93 (15%)
Query: 38 DSKPQHGSRDYERESSRS-REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDR 96
D K +H R++ +++S+ RE++KE +R++DR D+ REKD DREK R+ +RE+ RD+
Sbjct: 40 DRKKEH-RREHPKDASKEGRERKKEDRDEREKDRGNDKAREKDYDREKYREKERERDRDK 98
Query: 97 EKDREKDRHH-----------RDRHRERSRERS 118
KDR KD+ R R +ER +E+S
Sbjct: 99 -KDRSKDKEREKEREVEKDSDRVREKERGKEKS 130
>gi|383848143|ref|XP_003699711.1| PREDICTED: uncharacterized protein LOC100878766 [Megachile
rotundata]
Length = 517
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 7/54 (12%)
Query: 68 RDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERR 121
R+R+RD+ RE+DR+REK S RE++RE+D RD R+R R RS+ R
Sbjct: 428 RERERDKDRERDREREKD-------SMIRERERERDSMSRDEERDRDRSRSQYR 474
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 297 FVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTP 356
F E+ SV + A+AL+G GAP+ ++ P+LA ++ N +G P
Sbjct: 323 FWEIESV---NLALALNGQKLLGAPLVIQ------PTLAER---NRAANNTVGGTLGFGP 370
Query: 357 GSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 416
+ GP +++VG L TE + + + FG + ++ D +G SKGYA+ ++
Sbjct: 371 TNT---TGPLKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRH 426
Query: 417 LSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVL 457
A +NG ++ + + V +G P P + L
Sbjct: 427 ADDGKRAMEQMNGFELAGRPMKVCSV-EGDELPPPVPQRTL 466
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV L Y +E +I+ E +GP++ LV +++T +GYAF Y A
Sbjct: 140 LFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQA 199
Query: 428 NGIKMGDKTLTV 439
+G K+ ++ + V
Sbjct: 200 DGRKVDNRRVLV 211
>gi|391331652|ref|XP_003740257.1| PREDICTED: cyclin-L2-like [Metaseiulus occidentalis]
Length = 447
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 51 ESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRD 87
E+ R++ K++ R RD+DR RDRT EK R+REKSRD
Sbjct: 339 ETKGERDRYKDEDRHRDKDRSRDRTGEKSREREKSRD 375
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|409077587|gb|EKM77952.1| hypothetical protein AGABI1DRAFT_129741 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 820
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 74/117 (63%), Gaps = 18/117 (15%)
Query: 51 ESSRSRE-KEKEKGRDRDRDRDRDRTREKDRD--REKSRDMDREKSRD---------REK 98
+++R+R+ KEK KGR+++RD+DRDR E +RD R K RD +E++RD ++
Sbjct: 553 QATRNRDYKEKGKGREKERDKDRDRDVEWERDGWRVKDRDHRKERTRDGYRDRERFREDR 612
Query: 99 DREKDRHHRDRHRERSRER---SERRKDRDDDDHYRSRD-YDR-RKDYDRDREDRHK 150
++DR +RD++R+R RE+ ER +DR+ D H +R+ YD +KDY R R K
Sbjct: 613 QWDEDR-YRDKYRDRDREKVRERERNRDREKDKHASTRNKYDEVQKDYGDPRATREK 668
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|195490501|ref|XP_002093167.1| GE20934 [Drosophila yakuba]
gi|194179268|gb|EDW92879.1| GE20934 [Drosophila yakuba]
Length = 1080
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 47 DYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHH 106
+ +R + R R KE+++ +DR R R+R R++E+ + + DR+ S+DR+ +E+ R +
Sbjct: 527 EKQRPNERQRSKERQRSKDRHRSRERQRSKERQLSKNRQLSKDRQLSKDRQGLKERQRSN 586
Query: 107 RDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDRE-DRHKRRSQSRSRGRSEHRS 165
R+RS+ER D RSR+ KD R +E R K QS+ R RS+ R
Sbjct: 587 ---ERKRSKERQH------SKDRQRSRERQPSKDRQRSKERQRSKEPQQSKDRQRSKERQ 637
Query: 166 RSRSR 170
RSR R
Sbjct: 638 RSRER 642
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 33 ADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREK 92
+ D SK +H SRD R R KE+++ ++R R ++R R+RE+ R +E+ R ++++
Sbjct: 407 SKDRQRSKEKHRSRD------RLRSKERQRSKERQRSKERPRSRERQRSKERQRSKEKQR 460
Query: 93 SRDREKDREKD 103
S++R++ R KD
Sbjct: 461 SKERQRSRSKD 471
>gi|395519695|ref|XP_003763978.1| PREDICTED: peptidyl-prolyl cis-trans isomerase G isoform 1
[Sarcophilus harrisii]
Length = 749
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 14/111 (12%)
Query: 77 EKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDD-DHYRSRDY 135
E+ R R +S++ D EK+ +EK++ D ++R + RS+ERS+R + ++ DH RS+D
Sbjct: 478 EEKRMRSRSKERDHEKA--KEKEKHSDSRGKEREKSRSKERSKRAGSKTNEHDHSRSKDK 535
Query: 136 DRR-KDYDRDRE---------DRHKRRSQSRSRGRSEHRSRSRSRSRSKSK 176
D+R K R+RE R + RS+SR +GR RSRS+ R RS+S+
Sbjct: 536 DKRAKSKSREREVTKGKHSSNGRTRERSRSRDKGRRA-RSRSKDRDRSRSR 585
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 83 EKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDR-----DDDDHYRSRDYDR 137
E+ R R K RD EK +EK++H R +ER + RS+ R R ++ DH RS+D D+
Sbjct: 478 EEKRMRSRSKERDHEKAKEKEKHSDSRGKEREKSRSKERSKRAGSKTNEHDHSRSKDKDK 537
Query: 138 R-KDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
R K R+RE ++ + S R+R RSRSR K +R
Sbjct: 538 RAKSKSRERE-------VTKGKHSSNGRTRERSRSRDKGRR 571
>gi|357138246|ref|XP_003570708.1| PREDICTED: uncharacterized protein LOC100825209 [Brachypodium
distachyon]
Length = 806
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
Query: 52 SSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDRE 101
+ R R+KEKE+ RDRD++R+R R+KD+++E+ DRE+ + R KDR+
Sbjct: 90 TERERDKEKER---RDRDKERNRNRDKDKEKERPEKEDREREKSRGKDRQ 136
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 77 EKDRDREKSR-DMDREKSRDREKDREKDRHHRDRHRERSRERSERR-KDRDDDDHYRSRD 134
E++RD+EK R D D+E++R+R+KD+EK+R + RER + R KDR D D +S +
Sbjct: 91 ERERDKEKERRDRDKERNRNRDKDKEKERPEK-----EDREREKSRGKDRQDADLSKSDE 145
Query: 135 YDRRKDYDRDREDRHKRRSQSRSR 158
D++K D RE S R R
Sbjct: 146 GDQKKGVDPPREAEQTSTSTLRER 169
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|168025995|ref|XP_001765518.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683156|gb|EDQ69568.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2556
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 41 PQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDR 100
+HG ++R R E+++++ RDRD ++DR+R+ DR R K RD R+ +DR +
Sbjct: 2072 LKHG---HDRSWERVWEEQRDRERDRDYEKDRNRSPAWDRYRSKERDRARQTDKDRPRGT 2128
Query: 101 EKDRHHRDRHRERSRERSERRK----------DRDDDDHYRSRDYDRRKDYDRDREDRHK 150
++ R R + D D +R RDYD+ D R R +
Sbjct: 2129 DRIRERERGRERDRERWGGRERERERGRDRFADCVKDRSHRPRDYDQELDSRTTRYRRSR 2188
Query: 151 RRSQSRSRGRSEHRSRS 167
RS+SRS G+ + RSRS
Sbjct: 2189 SRSRSRSSGKGKVRSRS 2205
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 2209
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 44 GSRDYERESSRSREKEKEKGRDRDRDRDR--DRTREKDRDREKSRDMDREKSRDREKDRE 101
G + RE ++++E+GR+ +RDR+R D+ R+ + E SRD D+ + RD K++E
Sbjct: 2044 GFEERRREGDPEGQRDRERGRNWNRDRERNWDKNRDWQKSNESSRDWDKNRDRDANKEKE 2103
Query: 102 KDRH 105
+R+
Sbjct: 2104 LERN 2107
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 37/157 (23%)
Query: 194 GAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT--QQATRHARRVYVG 251
G G IP A + PN+ L G +P P+ + R VYVG
Sbjct: 23 GVSLGTLGAIPAA-----ALDPNITAL------GEIPQPPIMGNVDPSKIDEIRRTVYVG 71
Query: 252 GL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 306
L T + FF QV + G+ P +FAFVE
Sbjct: 72 NLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT------------RFAFVEFADQNSV 119
Query: 307 SNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
A+A +G++F P+K+ +P + P AA
Sbjct: 120 PRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 2281
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 44 GSRDYERESSRSREKEKEKGRDRDRDRDR--DRTREKDRDREKSRDMDREKSRDREKDRE 101
G + RE ++++E+GR+ +RDR+R D+ R+ + E SRD D+ + RD K++E
Sbjct: 2116 GFEERRREGDPEGQRDRERGRNWNRDRERNWDKNRDWQKSNESSRDWDKNRDRDANKEKE 2175
Query: 102 KDRH 105
+R+
Sbjct: 2176 LERN 2179
>gi|384252245|gb|EIE25721.1| hypothetical protein COCSUDRAFT_64802 [Coccomyxa subellipsoidea
C-169]
Length = 581
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 14 NNNNNNNNYEYGSS------PQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRD 67
N N E G S P D + K + ++ E++SS+ + K++ +DR
Sbjct: 62 NGGQENKAAENGGSAGIVKEPHQGGNDSQHEKKERSAAKVEEKDSSKHERERKDREKDRS 121
Query: 68 RDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDD 127
R+++R R REK+R +++ RD DR+ S+ ++D+++ R +R R+ SR+R E R+ D
Sbjct: 122 REKERHRDREKNR-KDRHRDSDRKDSKREKEDKKERRRSVERDRDSSRKRRETPPAREKD 180
Query: 128 DHYRSRDYDRRKD 140
R + RKD
Sbjct: 181 REMSKRSHSDRKD 193
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 471 LQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 512
++PG+ P++ + +T +V+ D L DDEEY E+++D+++E K+
Sbjct: 471 VEPGA-PTQYLQVTGMVTPDVLVDDEEYSEVIQDLQEECSKY 511
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 106
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 107 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 415
+FV + Y TE+++R E +GP++ +V ++ +G +GYAF Y+
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYE 152
>gi|338725771|ref|XP_001916061.2| PREDICTED: LOW QUALITY PROTEIN: TRAF3-interacting protein 1 [Equus
caballus]
Length = 680
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 8 GEDVDNNNNNN--NNNYEYGSSPQPRSADDHSDSKPQHGSRDYERESSRSR---EKEKEK 62
GE VD + + + E+ + H D + + S ER +SR R E+ KE+
Sbjct: 110 GEKVDMKGRTSLTSKSQEWDNKNTREEPKVHKDKEDRRNSEINERSTSRDRKQKEELKEE 169
Query: 63 GRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR 104
G+ R+++RD+++T+E DRDR K D +R+K R+ E+++ K R
Sbjct: 170 GKPREKERDKEKTKENDRDRHK--DAERDKYREGEREKTKAR 209
>gi|395519697|ref|XP_003763979.1| PREDICTED: peptidyl-prolyl cis-trans isomerase G isoform 2
[Sarcophilus harrisii]
Length = 734
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 14/111 (12%)
Query: 77 EKDRDREKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDRDDD-DHYRSRDY 135
E+ R R +S++ D EK+ +EK++ D ++R + RS+ERS+R + ++ DH RS+D
Sbjct: 463 EEKRMRSRSKERDHEKA--KEKEKHSDSRGKEREKSRSKERSKRAGSKTNEHDHSRSKDK 520
Query: 136 DRR-KDYDRDRE---------DRHKRRSQSRSRGRSEHRSRSRSRSRSKSK 176
D+R K R+RE R + RS+SR +GR RSRS+ R RS+S+
Sbjct: 521 DKRAKSKSREREVTKGKHSSNGRTRERSRSRDKGRRA-RSRSKDRDRSRSR 570
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 83 EKSRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDR-----DDDDHYRSRDYDR 137
E+ R R K RD EK +EK++H R +ER + RS+ R R ++ DH RS+D D+
Sbjct: 463 EEKRMRSRSKERDHEKAKEKEKHSDSRGKEREKSRSKERSKRAGSKTNEHDHSRSKDKDK 522
Query: 138 R-KDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSKR 177
R K R+RE ++ + S R+R RSRSR K +R
Sbjct: 523 RAKSKSRERE-------VTKGKHSSNGRTRERSRSRDKGRR 556
>gi|359472695|ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247382 [Vitis vinifera]
Length = 1119
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRD----------REKSRDMDREKSRD 95
R +RE R+R++EK++G DR+ DR R + RE+DR R ++RD+D E RD
Sbjct: 466 RSMDREMDRNRKREKDRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDIDWENDRD 525
Query: 96 REKDREKDR-HHRDRHRERSRERSERRKDRDD-----DDHYRSRDYDRRKDYDRDREDRH 149
R +DR+ +R RDR R++ R+ R R +D Y +RD Y R E H
Sbjct: 526 RARDRKSERGSGRDRSRDKVRDSESDRVSRHHKYETLNDGYGNRDRYGDSWYLRHDETEH 585
Query: 150 KR 151
+R
Sbjct: 586 QR 587
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
Query: 62 KGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDR---------------HH 106
K RDR DR+ DR R++++DR R+MDR + ++RE+DR DR
Sbjct: 462 KERDRSMDREMDRNRKREKDRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDIDWE 521
Query: 107 RDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHKR 151
DR R R R +SER RD RSR D+ +D + DR RH +
Sbjct: 522 NDRDRARDR-KSERGSGRD-----RSR--DKVRDSESDRVSRHHK 558
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 28 PQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRD 87
P+P+ AD+ + G ER R + E+ R R+ +RDRD R +D++ +K+RD
Sbjct: 2328 PEPQQADN------RQGRPFEERRRDREHGRPWERDRGRNWNRDRDWERHRDKEWDKNRD 2381
Query: 88 MDREKSRDREKDREKDRHH 106
R++ KDREKD H
Sbjct: 2382 ------RNQNKDREKDSEH 2394
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FV + Y TE+++R E +GP++ +V ++ +G +GYAF Y+ A
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIYMVYNKHSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 428 NGIKMGDKTLTV 439
+G K+ + + V
Sbjct: 165 DGKKIDGRRVLV 176
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 28 PQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRD 87
P+P+ AD+ + G ER R + E+ R R+ +RDRD R +D++ +K+RD
Sbjct: 1984 PEPQQADN------RQGRPFEERRRDREHGRPWERDRGRNWNRDRDWERHRDKEWDKNRD 2037
Query: 88 MDREKSRDREKDREKDRHH 106
R++ KDREKD H
Sbjct: 2038 ------RNQNKDREKDSEH 2050
>gi|320545415|ref|NP_001097475.2| CG7971, isoform F [Drosophila melanogaster]
gi|318069094|gb|ABW08438.2| CG7971, isoform F [Drosophila melanogaster]
Length = 1655
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 50 RESSRSREKEKEKGRDRDR--------------------DRDRDRTREKDRDREKSRDMD 89
RE S+ R++ KEK R RDR ++R R++E+ R E+ R +
Sbjct: 627 RERSKDRQRSKEKHRSRDRLRSRERQRSRERQRSRERQRSKERQRSKERQRSIERQRSKE 686
Query: 90 REKSRDREKDREKD------RHHRDRHRERSRERSERRKDRD-DDDHYRSRDYDRRKDYD 142
R++S++R++ R KD + + R + KDR + +R +D + D
Sbjct: 687 RQRSKERQRSRSKDALRCKEKPQCNEKERSRERRRSKSKDRQRSKEKHRPKDEQQSVDKR 746
Query: 143 RDRE-DRHKRRSQSRSRGRSEHRSRSRSRSRSK 174
RDR DR K +S R RS+ R RS+ R RSK
Sbjct: 747 RDRSTDRSKENQRSNERQRSKERQRSKERERSK 779
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 32/158 (20%)
Query: 45 SRDYERESSRSREKEKEKGRDRDRDRDRD--RTREK--------------------DRDR 82
S++ +R R R KE+++ ++R R R +D R +EK R +
Sbjct: 672 SKERQRSIERQRSKERQRSKERQRSRSKDALRCKEKPQCNEKERSRERRRSKSKDRQRSK 731
Query: 83 EKSRDMDREKSRDREKDREKDR---HHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRK 139
EK R D ++S D+ +DR DR + R R+RS+ER +R K+R+ RS+D R +
Sbjct: 732 EKHRPKDEQQSVDKRRDRSTDRSKENQRSNERQRSKER-QRSKERE-----RSKDRQRSR 785
Query: 140 DYDRDREDR-HKRRSQSRSRGRSEHRSRSRSRSRSKSK 176
+ R +E + K R + R RS R RS+ R SK K
Sbjct: 786 ERRRSKEGQLSKDRQGLKERQRSNERKRSKERQPSKEK 823
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 49 ERESSRSREKEKEKGRDRDRDRDRDRTREKDRDR 82
E SS REKE++K RD+D+DR+R+R +KDRDR
Sbjct: 435 EGRSSERREKEEKKSRDKDKDRERERKDKKDRDR 468
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 66/185 (35%), Gaps = 47/185 (25%)
Query: 180 GFDMAPPASAMLAAGAGAAAAGQIPGANP------------AIPG--MFPNMFPLVTGQQ 225
+ PPA M + GA IP NP AIP + PN+ L
Sbjct: 72 ALSLLPPAPTMTSLMPGAGLL-PIPTPNPLTTLGVSLSSLGAIPAAALDPNITTL----- 125
Query: 226 FGALPVMPVQAMT--QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTA 278
G +P P+ + R VYVG L T + FF QV + G+
Sbjct: 126 -GEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET 184
Query: 279 GPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYN 331
P +FAFVE A+A +G++F P+K+ +P +
Sbjct: 185 QPT------------RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMT 232
Query: 332 PSLAA 336
P AA
Sbjct: 233 PQAAA 237
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 295 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 354
+VE A+AL G G PV V+ PS+ +L Q A L
Sbjct: 225 IGYVEFYDTMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSTTAAAGAGGML 277
Query: 355 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 414
P S G R++VG L +E +R++ E FG + + +D ETG KG+ F +
Sbjct: 278 GPYSGGA----RRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRD-ETGLCKGFGFVQF 332
Query: 415 QDL 417
L
Sbjct: 333 ARL 335
>gi|47228314|emb|CAG07709.1| unnamed protein product [Tetraodon nigroviridis]
Length = 464
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 65 DRDRDRDRDRTREKDRDREKSRDMDREKSRDR----EKDREKDRHHRDRHRERSRERSER 120
D++RD DR R K+R+ K R ++EKSRD+ E D + + R+RHR+ + +
Sbjct: 334 DKERDGGDDRNRRKERELHKDRGTEKEKSRDKKSRGESDDRRHKEDRERHRDERKTKRSS 393
Query: 121 RKDRDDDDH---------YRSRDYDRRKDYDRDREDRHKRRSQSRSRG---------RSE 162
R D H R R + R K+ +RD E R +RS S+ R S+
Sbjct: 394 RSPSRDRRHKSGGEEKSRKRDRSHSRDKERERDGEQRSHKRSHSKERSHHQRESSADHSK 453
Query: 163 HRSRSRSRS 171
H R RSRS
Sbjct: 454 HSERRRSRS 462
>gi|358398112|gb|EHK47470.1| hypothetical protein TRIATDRAFT_83250 [Trichoderma atroviride IMI
206040]
Length = 920
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 25 GSSPQPRSADDHSDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREK 84
G P RS DD + + + GS D + SS K+K+K RD +R +D+ R E+D DR++
Sbjct: 669 GDQPSQRSKDDKAAERSRSGSPDDGKRSSYRSRKDKDKDRDYERRKDKYRAEEED-DRQR 727
Query: 85 SRDMDREKSRDREKDREKDRHHRDRHRERSRERSERRKDR 124
S R RDR D E D+ RER ++ S RK++
Sbjct: 728 S--SHRSSHRDR-GDYEHSSRRYDKERERDKDSSSNRKEK 764
>gi|194902968|ref|XP_001980797.1| GG16917 [Drosophila erecta]
gi|190652500|gb|EDV49755.1| GG16917 [Drosophila erecta]
Length = 892
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 37/102 (36%)
Query: 54 RSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDR----------------- 96
R ++KEK++ DRDRD+++EKDRDR+KS++ DR++ D+
Sbjct: 176 RVKDKEKDR------DRDRDKSKEKDRDRDKSKEKDRDRVTDKSKEKDWDKDRDKYKDKF 229
Query: 97 -------EKDREKDRHHR------DRHRERSRERSERRKDRD 125
EK++EK + + H E+ RER ER K RD
Sbjct: 230 TAAQTPSEKEKEKSENRKRSAVDPASHPEK-RERHERDKQRD 270
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP----------- 105
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 106 -TRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 8 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 56
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 57 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP----------- 105
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 106 -TRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNITTL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|281202711|gb|EFA76913.1| YEATS family protein [Polysphondylium pallidum PN500]
Length = 457
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 37 SDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKS----RDMDREK 92
SD++ ++ +D ERE R +E ++ RDRD+D D + RE+DR R+ S RD D +K
Sbjct: 396 SDNRSRYREKDKEREKGMDRHRETDRNRDRDKDSDNSKWRERDRKRKDSEHSGRDSDDQK 455
>gi|297737836|emb|CBI27037.3| unnamed protein product [Vitis vinifera]
Length = 998
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Query: 46 RDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRD----------REKSRDMDREKSRD 95
R +RE R+R++EK++G DR+ DR R + RE+DR R ++RD+D E RD
Sbjct: 345 RSMDREMDRNRKREKDRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDIDWENDRD 404
Query: 96 REKDREKDR-HHRDRHRERSRE 116
R +DR+ +R RDR R++ R+
Sbjct: 405 RARDRKSERGSGRDRSRDKVRD 426
>gi|414869233|tpg|DAA47790.1| TPA: hypothetical protein ZEAMMB73_970575 [Zea mays]
Length = 596
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 368 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 427
+FVG L ++ T+A + L +G ++ ++ +G SKGY + D A+
Sbjct: 178 LFVGELHWWTTDADLESELIKYGSVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKEAM 237
Query: 428 NGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQP 473
NG + V A + + E + + QQ +A Q +QP
Sbjct: 238 NGHTFNGRPCVVAFATPNSVRRMGEAQ---VKNQQAMAAQTSNMQP 280
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|85111588|ref|XP_964008.1| hypothetical protein NCU02052 [Neurospora crassa OR74A]
gi|28925766|gb|EAA34772.1| predicted protein [Neurospora crassa OR74A]
gi|38566902|emb|CAE76206.1| related to TSM1-component of TFIID complex [Neurospora crassa]
Length = 1870
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 12/84 (14%)
Query: 47 DYERESSRS-REKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRH 105
D++RE R E+EKEK R+R+RDR+ DR E+ R EK RDREK RE+
Sbjct: 1595 DHDRERYRGGAEREKEKYRERERDRESDREHERPR----------EKERDREKYRERGDR 1644
Query: 106 HRDRHRERSRERS-ERRKDRDDDD 128
DR R+R RE+ E+ DR D D
Sbjct: 1645 DSDRERDRPREKYREKGTDRGDSD 1668
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|158287379|ref|XP_001688187.1| AGAP011217-PA [Anopheles gambiae str. PEST]
gi|157019622|gb|EDO64464.1| AGAP011217-PA [Anopheles gambiae str. PEST]
Length = 1241
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Query: 56 REKEKEKGRDRDRDR-DRDRTREKDRDREKSRDM 88
R++EKE+ +++DR+R ++DR REKDRD+EK RDM
Sbjct: 792 RDREKERDKEKDRERGEKDREREKDRDKEKDRDM 825
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIAAL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP----------- 221
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 222 -TRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|390345979|ref|XP_789163.3| PREDICTED: uncharacterized protein LOC584197 [Strongylocentrotus
purpuratus]
Length = 1759
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 21/121 (17%)
Query: 44 GSRDYERESSRSREKEKEKGRDRDRDRDRDRTR------EKDRDREKSRDMDREKSRDRE 97
GSR +RE + KE++ D+DR ++DR + E+ R+RE+ RD +++K +D
Sbjct: 1327 GSRSKDRERKHEQHKERKSDHDKDRKNEQDRGKDSTEDGEQGRERERDRDQEKDKGKDAT 1386
Query: 98 KD-------REKDRHHRDRHRERSRERSERRKDRDDDDHYRSRDYDRRKDYDRDREDRHK 150
D H +DR RER R R D R RD +R + D+DRE+RH+
Sbjct: 1387 VDGEQDRERERDREHEKDRGRERDHGRDRER------DLRRVRDDERHR--DQDRENRHE 1438
Query: 151 R 151
+
Sbjct: 1439 K 1439
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 151 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 199
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 200 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP----------- 248
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 249 -TRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 299
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|156545118|ref|XP_001602070.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Nasonia
vitripennis]
Length = 821
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 23/69 (33%)
Query: 49 ERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDREKDREKDRHHRD 108
ER+ SR RE+ +EK DR RDR++DR+REKD DR RD
Sbjct: 59 ERDKSRGRERSREKEIDRTRDREQDRSREKDLDR-----------------------SRD 95
Query: 109 RHRERSRER 117
+ R++SR+R
Sbjct: 96 KGRDKSRDR 104
>gi|336463459|gb|EGO51699.1| hypothetical protein NEUTE1DRAFT_70654 [Neurospora tetrasperma FGSC
2508]
Length = 1870
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 52 SSRSREKEKEKGRDRDR-----DRDRDRTREKDRDREKSRDMDR--EKSRDREKDREKDR 104
SS+ REK++ DR+R +R++++ RE++RDRE R+ +R EK RDREK RE+
Sbjct: 1583 SSKFREKDRNDS-DRERYRGGAEREKEKYRERERDRESDREHERPREKERDREKYRERGD 1641
Query: 105 HHRDRHRERSRERS-ERRKDRDDDD 128
DR R+R RE+ E+ DR D D
Sbjct: 1642 RDSDRERDRPREKYREKGTDRGDSD 1666
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 26 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 74
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 75 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP----------- 123
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 124 -TRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 174
>gi|297744453|emb|CBI37715.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Query: 37 SDSKPQHGSRDYERESSRSREKEKEKGRDRDRDRDRDRTREKDRDREKSRDMDREKSRDR 96
SD K H RD E R RE++KEK R+ R D+ REK RD R+K
Sbjct: 9 SDLKKSHRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDK---- 64
Query: 97 EKDREKDRHHRDRHRERSRERS-ERRKDRDDDDHYRSRDYDRRKDYDRDRE 146
+D+E+ R RD R+R+RER+ +R K+RD D + RD +R K+ +RD+E
Sbjct: 65 -RDKERTRSSRDDERDRARERTKDREKERDRD--HEGRDAEREKERERDKE 112
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|126326295|ref|XP_001367657.1| PREDICTED: peptidyl-prolyl cis-trans isomerase G [Monodelphis
domestica]
Length = 749
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 15/99 (15%)
Query: 83 EKSRDMDREKSRDREKDREKDRHH----RDRHRERSRERSERRKDRDDD-DHYRSRDYDR 137
E+ R R K RD EK +EK++H ++R + RS+ERS+R + ++++ DH RS+D D+
Sbjct: 478 EEKRMRSRSKERDHEKVKEKEKHSDSRIKEREKSRSKERSKRAESKNNEHDHSRSKDKDK 537
Query: 138 RKDYDRDREDRHKRRSQSRSRGRSEHRSRSRSRSRSKSK 176
R K +S+ R + +H S R+R RS+S+
Sbjct: 538 RA----------KSKSREREVTKGKHSSNGRTRERSRSR 566
>gi|350297324|gb|EGZ78301.1| hypothetical protein NEUTE2DRAFT_80725 [Neurospora tetrasperma FGSC
2509]
Length = 1870
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 52 SSRSREKEKEKGRDRDR-----DRDRDRTREKDRDREKSRDMDR--EKSRDREKDREKDR 104
SS+ REK++ DR+R +R++++ RE++RDRE R+ +R EK RDREK RE+
Sbjct: 1583 SSKFREKDRNDS-DRERYRGGAEREKEKYRERERDRESDREHERPREKERDREKYRERGD 1641
Query: 105 HHRDRHRERSRERS-ERRKDRDDDD 128
DR R+R RE+ E+ DR D D
Sbjct: 1642 RDSDRERDRPREKYREKGTDRGDSD 1666
>gi|410055433|ref|XP_003317099.2| PREDICTED: death-inducer obliterator 1-like [Pan troglodytes]
Length = 1459
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 68 RDRDRDRTREKDRDREK--SRDMD--REKSRDREKDREKDR 104
R+RD DR RE DR R+K SRD D RE+S +R+++RE DR
Sbjct: 1344 RERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADR 1384
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 87 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 135
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 136 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP----------- 184
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 185 -TRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 235
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPT---------- 222
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 223 --RFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 68 RDRDRDRTREKDRDREK--SRDMD--REKSRDREKDREKDR 104
R+RD DR RE DR R+K SRD D RE+S +R+++RE DR
Sbjct: 2122 RERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADR 2162
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 68 RDRDRDRTREKDRDREK--SRDMD--REKSRDREKDREKDR 104
R+RD DR RE DR R+K SRD D RE+S +R+++RE DR
Sbjct: 2125 RERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADR 2165
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 68 RDRDRDRTREKDRDREK--SRDMD--REKSRDREKDREKDR 104
R+RD DR RE DR R+K SRD D RE+S +R+++RE DR
Sbjct: 2124 RERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADR 2164
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 68 RDRDRDRTREKDRDREK--SRDMD--REKSRDREKDREKDR 104
R+RD DR RE DR R+K SRD D RE+S +R+++RE DR
Sbjct: 2124 RERDWDRAREWDRHRDKDCSRDWDRNRERSANRDREREADR 2164
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 68 RDRDRDRTREKDRDREK--SRDMD--REKSRDREKDREKDR 104
R+RD DR RE DR R+K SRD D RE+S +R+++RE DR
Sbjct: 2121 RERDWDRAREWDRHRDKDSSRDWDRNRERSANRDREREADR 2161
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 37/172 (21%)
Query: 179 SGFDMAPPASAMLAAGAGAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMT 238
+G P + + G ++ G IP A + PN+ L G +P P+
Sbjct: 124 AGLLPIPTPNPLTTLGVSLSSLGAIPAA-----ALDPNIATL------GEIPQPPLMGNV 172
Query: 239 --QQATRHARRVYVGGL-PPTANEQSVATFFSQV----MAAIGGNTAGPGDAVVNVYINH 291
+ R VYVG L T + FF QV + G+ P
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQP----------- 221
Query: 292 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR-------RPSDYNPSLAA 336
+FAFVE A+A +G++F P+K+ +P + P AA
Sbjct: 222 -TRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 272
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 68 RDRDRDRTREKDRDREK--SRDMD--REKSRDREKDREKDR 104
R+RD DR RE DR R+K SRD D RE+S +R+++RE DR
Sbjct: 2161 RERDWDRPREWDRHRDKDSSRDWDRNRERSANRDREREADR 2201
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,015,325,249
Number of Sequences: 23463169
Number of extensions: 411011165
Number of successful extensions: 5891518
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 41574
Number of HSP's successfully gapped in prelim test: 38518
Number of HSP's that attempted gapping in prelim test: 3138945
Number of HSP's gapped (non-prelim): 1000732
length of query: 545
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 397
effective length of database: 8,886,646,355
effective search space: 3527998602935
effective search space used: 3527998602935
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)