BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009054
(545 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 235/552 (42%), Gaps = 63/552 (11%)
Query: 31 RFFTWNVTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSL-PEPFLISWNG 89
R + W V Y P + INGQFPGP I + D++++ + N L E +I W+G
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 90 VQQRRNSYEDGVYGTT-CPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRIL 148
+ QR + DG + C I PG+ F Y V D G++FY +G Q++AG +G + +
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 149 SRPLIPVPFPEPAGDFTVLIGDWYKANHNKLKSVLDRG--HRLPSPDGILINGHGSNGAS 206
PF G+ +L+ DW+ + +K + L + P IL+NG G S
Sbjct: 123 PPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181
Query: 207 ------------------------FTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEV 242
F V KTYR RI++ +LNF I H++ +VE
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 243 EGTHTIQTTYSSLDVHVGQSYSVLVTMDQ-PPQDFYIAVSTRFTNKVLTSTGTL--HYSN 299
+G + S +D++ G+SYSVL+T DQ P ++++++V TR + TL + N
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPN 301
Query: 300 SAHXXXXXXXXXXTTQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESS 359
S D+ ++ + R P+P + +R I L ++
Sbjct: 302 SVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPP---------VKFNRRIFLLNT 352
Query: 360 AGQVNGKQRYAVNSVSFIPADTPLKLADYFKIGGVFRVG----------SIQDQPTGGNI 409
+NG ++A+N VS TP A + + F I PT
Sbjct: 353 QNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKT 412
Query: 410 YLDTSVMGADFRGFIEIVFQN----HENIVQS--WHIDGYNFWVVGMNGGVWTPASRNEY 463
+ V ++++ QN EN+ ++ WH+ G++FWV+G G ++ +
Sbjct: 413 RIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSL 472
Query: 464 NLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVESIRD 523
NL++ R T ++P WTAI DN G+W ++G E +
Sbjct: 473 NLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF-----AEGVEK 527
Query: 524 EYPIPKNALLCG 535
IP AL CG
Sbjct: 528 VGRIPTKALACG 539
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 24/260 (9%)
Query: 34 TWNVTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWN 88
T +T ++ P G + GIL+NG GP I NDN +NV N L P + I W+
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 89 GVQQRRNSYEDGVYGTT-CPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRI 147
G+ QR ++ DG G CPI PG F Y G+++Y G Q G G + I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 148 L--SRPLIPVPFPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPSPDGILINGHG---- 201
+ P + + E + + + DWY ++ PD LING G
Sbjct: 127 YDDNDPHAAL-YDEDDENTIITLADWYHIPAPSIQGAA-------QPDATLINGKGRYVG 178
Query: 202 ---SNGASFTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVH 258
+ + VEQGK YR R+ ++ + F I GH++ ++EV+G T T L +
Sbjct: 179 GPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIF 238
Query: 259 VGQSYSVLVTMDQPPQDFYI 278
GQ YS ++ +QP +++I
Sbjct: 239 TGQRYSFVLDANQPVDNYWI 258
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 24/260 (9%)
Query: 34 TWNVTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWN 88
T +T ++ P G + GIL+NG GP I NDN +NV N L P + I W+
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 89 GVQQRRNSYEDGVYGTT-CPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRI 147
G+ QR ++ DG G CPI PG F Y G+++Y G Q G G + I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 148 L--SRPLIPVPFPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPSPDGILINGHG---- 201
+ P + + E + + + DWY ++ PD LING G
Sbjct: 127 YDDNDPHAAL-YDEDDENTIITLADWYHIPAPSIQGAA-------QPDATLINGKGRYVG 178
Query: 202 ---SNGASFTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVH 258
+ + VEQGK YR R+ ++ + F I GH++ ++EV+G T T L +
Sbjct: 179 GPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIF 238
Query: 259 VGQSYSVLVTMDQPPQDFYI 278
GQ YS ++ +QP +++I
Sbjct: 239 TGQRYSFVLDANQPVDNYWI 258
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 192/484 (39%), Gaps = 67/484 (13%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
++ D+ P G + ++ NG FPGP I DN INV ++L + I W+G+
Sbjct: 10 ISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q ++ DG + CPI G +F Y V DQ G+++Y + Q G G ++
Sbjct: 70 QHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYC-DGLRGPLVVYD 128
Query: 151 PLIPVPFPEPAGDFTVLI--GDWYKANHNKLKSVLDRGHRLPSPDGILINGHG------- 201
P P D T +I DWY KL P+ D +LING G
Sbjct: 129 PSDPYASMYDVDDDTTVITLSDWYHTAA-KLGPAFP-----PNADSVLINGLGRFAGGNA 182
Query: 202 SNGASFTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQ 261
S+ A TVEQ K YRFR+ ++ + F I GH M ++EV+G + S+ + Q
Sbjct: 183 SDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQ 242
Query: 262 SYSVLVTMDQPPQDFYIAVSTRFTNKVLTSTGTLHYSNSAHXXXXXXXXXXTTQIDWSLN 321
YS ++ Q +++I + + +TGT+ + + +D + N
Sbjct: 243 RYSFVLNATQSVDNYWI--------RAIPNTGTIDTTGGLNSAILRYSGADI--VDPTAN 292
Query: 322 QARS----IRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVSFI 377
S + T+L P G G ++++ + NG + +N+ + I
Sbjct: 293 ATTSVIPLVETDLVPLD-SPAAPGDPVVGGVDLAMNLDF-----SFNGTNFF-INNETLI 345
Query: 378 PADTPLK---LADYFKIGGVFRVGSIQDQPTGGNIYLD---TSVMGADFRGFIEIVFQNH 431
P P+ L+ + GS+ P I L T+V G N
Sbjct: 346 PPTVPVLLQILSGAQSASDLLPTGSVYTLPLNSTIELSFPITTVNGV----------TNA 395
Query: 432 ENIVQSWHIDGYNFWVVGMNGGVWTPASRNEYNLRDAVSRCTTQV-YPKSWTAIYVALDN 490
+H+ G+ F VV G ++YN + V R T P I DN
Sbjct: 396 PGAPHPFHLHGHAFSVVRSAG-------SSDYNYVNPVRRDTVSTGNPGDNVTIRFTTDN 448
Query: 491 VGMW 494
G W
Sbjct: 449 AGPW 452
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 203/518 (39%), Gaps = 73/518 (14%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
++ G + P G +Q IL+N FP P I D +NV +++ + I W+G
Sbjct: 10 ISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q ++ DG + CPI G F Y QV DQ G+++Y + Q G G I +
Sbjct: 70 QHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDP 129
Query: 151 PLIPVPFPEPAGDFTVL-IGDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASF-- 207
+ D TV+ + DWY H K G +P+ D LING G + A+
Sbjct: 130 NDPHASLYDVDDDSTVITLADWY---HLAAK----VGAPVPTADATLINGLGRSAATLAA 182
Query: 208 -----TVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQS 262
TV +GK YRFR+ ++ + F I GH + ++E + + T SL + Q
Sbjct: 183 DLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQR 242
Query: 263 YSVLVTMDQPPQDFYIAVSTRFTNKVLTSTGTLHYS---NSA--HXXXXXXXXXXTTQID 317
YS ++ DQ +++I + L ++GT +++ NSA T+Q
Sbjct: 243 YSFVLNADQDVDNYWI--------RALPNSGTQNFAGGTNSAILRYDGAAPVEPTTSQTP 294
Query: 318 WSLNQARSIRTNL--TASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVS 375
+ S T L TA+ P P G ++++ + + G + +N S
Sbjct: 295 STNPLVESALTTLKGTAAPGSPTPGG------VDLALNMAFGFAGGN------FTINGAS 342
Query: 376 FIPADTPLK---LADYFKIGGVFRVGSIQDQPTGGNIYLDTSVMGADFRGFIEIVFQNHE 432
F P P+ L+ + GS+ P +I + A GF
Sbjct: 343 FTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANADIEISLPATAA-APGF--------- 392
Query: 433 NIVQSWHIDGYNFWVVGMNGGVWTPASRNEYNLRDAVSRCTTQV-YPKSWTAIYVALDNV 491
+H+ G+ F VV G + YN + V R P I DN
Sbjct: 393 --PHPFHLHGHVFAVVRSAG-------SSTYNYANPVYRDVVSTGAPGDNVTIRFRTDNP 443
Query: 492 GMWNVRSEFWARQYLGQQFYLRVYSPVESIRDEYPIPK 529
G W + +L F + + + + P+P+
Sbjct: 444 GPWFLHCHI--DFHLEAGFAVVMAEDIPDVAATNPVPQ 479
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 203/518 (39%), Gaps = 73/518 (14%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
++ G + P G +Q IL+N FP P I D +NV +++ + I W+G
Sbjct: 10 ISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q ++ DG + CPI G F Y QV DQ G+++Y + Q G G I +
Sbjct: 70 QHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDP 129
Query: 151 PLIPVPFPEPAGDFTVL-IGDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASF-- 207
+ D TV+ + DWY H K G +P+ D LING G + A+
Sbjct: 130 NDPHASLYDVDDDSTVITLADWY---HLAAK----VGAPVPTADATLINGLGRSAATLAA 182
Query: 208 -----TVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQS 262
TV +GK YRFR+ ++ + F I GH + ++E + + T SL + Q
Sbjct: 183 DLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQR 242
Query: 263 YSVLVTMDQPPQDFYIAVSTRFTNKVLTSTGTLHYS---NSA--HXXXXXXXXXXTTQID 317
YS ++ DQ +++I + L ++GT +++ NSA T+Q
Sbjct: 243 YSFVLNADQDVDNYWI--------RALPNSGTQNFAGGTNSAILRYDGAAPVEPTTSQTP 294
Query: 318 WSLNQARSIRTNL--TASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVS 375
+ S T L TA+ P P G ++++ + + G + +N S
Sbjct: 295 STNPLVESALTTLKGTAAPGSPTPGG------VDLALNMAFGFAGGN------FTINGAS 342
Query: 376 FIPADTPLK---LADYFKIGGVFRVGSIQDQPTGGNIYLDTSVMGADFRGFIEIVFQNHE 432
F P P+ L+ + GS+ P +I + A GF
Sbjct: 343 FTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANADIEISLPATAA-APGF--------- 392
Query: 433 NIVQSWHIDGYNFWVVGMNGGVWTPASRNEYNLRDAVSRCTTQV-YPKSWTAIYVALDNV 491
+H+ G+ F VV G + YN + V R P I DN
Sbjct: 393 --PHPFHLHGHVFAVVRSAG-------SSTYNYANPVYRDVVSTGAPGDNVTIRFRTDNP 443
Query: 492 GMWNVRSEFWARQYLGQQFYLRVYSPVESIRDEYPIPK 529
G W + +L F + + + + P+P+
Sbjct: 444 GPWFLHCHI--DFHLEAGFAVVMAEDIPDVAATNPVPQ 479
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 201/518 (38%), Gaps = 73/518 (14%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
++ G + P G +Q IL+N FP P I D +NV +++ + I W+G
Sbjct: 10 ISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q ++ DG + CPI G F Y QV DQ G+++Y + Q G G I +
Sbjct: 70 QHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDP 129
Query: 151 PLIPVPFPEPAGDFTVL-IGDWYKANHNKLKSVLDRGHRLPSPDGILINGHG-------S 202
+ D TV+ + DWY H K G +P+ D LING G +
Sbjct: 130 QDPHKSLYDVDDDSTVITLADWY---HLAAK----VGSPVPTADATLINGLGRSIDTLNA 182
Query: 203 NGASFTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQS 262
+ A TV +GK YRFR+ ++ + F I GH + ++E + + T S+ + Q
Sbjct: 183 DLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQR 242
Query: 263 YSVLVTMDQPPQDFYIAVSTRFTNKVLTSTGTLHYS---NSA--HXXXXXXXXXXTTQID 317
YS ++ DQ +++I + L ++GT ++ NSA T+Q
Sbjct: 243 YSFVLNADQDVGNYWI--------RALPNSGTRNFDGGVNSAILRYDGAAPVEPTTSQTP 294
Query: 318 WSLNQARSIRTNL--TASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVS 375
+ S T L TA+ P P G + L + G GK + +N S
Sbjct: 295 STNPLVESALTTLEGTAAPGSPAPGG----------VDLALNMAFGFAGGK--FTINGAS 342
Query: 376 FIPADTPLK---LADYFKIGGVFRVGSIQDQPTGGNIYLDTSVMGADFRGFIEIVFQNHE 432
F P P+ L+ + GS+ P +I + A GF
Sbjct: 343 FTPPTVPVLLQILSGAQSAQDLLPSGSVYSLPANADIEISLPATAA-APGF--------- 392
Query: 433 NIVQSWHIDGYNFWVVGMNGGVWTPASRNEYNLRDAVSRCTTQV-YPKSWTAIYVALDNV 491
+H+ G+ F VV G + YN + V R P I DN
Sbjct: 393 --PHPFHLHGHTFAVVRSAG-------SSTYNYENPVYRDVVSTGSPGDNVTIRFRTDNP 443
Query: 492 GMWNVRSEFWARQYLGQQFYLRVYSPVESIRDEYPIPK 529
G W + +L F + + + + P+P+
Sbjct: 444 GPWFLHCHI--DFHLEAGFAVVMAEDIPEVAATNPVPQ 479
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 33/284 (11%)
Query: 42 IYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-ISWNGVQQRRNSYEDG 100
I P G + + NG PGP I + DNLII+V N+L I W+G++Q + DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 101 VYGTT-CPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPFPE 159
V G T CPI PG TY QV Q G+ +Y Q G FG + I++ P + E
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL-IINGPAT-ADYDE 195
Query: 160 PAGDFTVLIGDWYKANHNKLKSVLDRGHRLPSP---DGILINGHGSNGAS---------- 206
G + + DW H + + D RL +P + L+NG + S
Sbjct: 196 DVG--VIFLQDWA---HESVFEIWDTA-RLGAPPALENTLMNGTNTFDCSASTDPNCVGG 249
Query: 207 -----FTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQ 261
T +G YR R+ NVG+ F I H + ++ + + T +L + +GQ
Sbjct: 250 GKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQ 309
Query: 262 SYSVLVTMDQPPQDFYI----AVSTRFTNKVLTSTGTLHYSNSA 301
Y V+V + +++I + N+ +TG L Y +S+
Sbjct: 310 RYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSS 353
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 33/284 (11%)
Query: 42 IYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-ISWNGVQQRRNSYEDG 100
I P G + + NG PGP I + DNLII+V N+L I W+G++Q + DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 101 VYGTT-CPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPFPE 159
V G T CPI PG TY QV Q G+ +Y Q G FG + I++ P + E
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL-IINGPAT-ADYDE 195
Query: 160 PAGDFTVLIGDWYKANHNKLKSVLDRGHRLPSP---DGILINGHGSNGAS---------- 206
G + + DW H + + D RL +P + L+NG + S
Sbjct: 196 DVG--VIFLQDWA---HESVFEIWDTA-RLGAPPALENTLMNGTNTFDCSASTDPNCVGG 249
Query: 207 -----FTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQ 261
T +G YR R+ NVG+ F I H + ++ + + T +L + +GQ
Sbjct: 250 GKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQ 309
Query: 262 SYSVLVTMDQPPQDFYI----AVSTRFTNKVLTSTGTLHYSNSA 301
Y V+V + +++I + N+ +TG L Y +S+
Sbjct: 310 RYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSS 353
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 125/289 (43%), Gaps = 37/289 (12%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
+T + P G +Q +++NG PGP I D +NV ++L + I W+G
Sbjct: 10 ITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q+ ++ DG + CPI G +F Y QV DQ G+++Y + Q G L
Sbjct: 70 QKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDG-------LRG 122
Query: 151 PLIPVPFPEPAGDF--------TVLIGDWYKANHNKLKSVLDRGHRLPSPDGILINGHGS 202
P + +PA D + + DWY KL G D LING G
Sbjct: 123 PFVVYDPNDPAADLYDVDNDDTVITLVDWYHVAA-KLGPAFPLGA-----DATLINGKGR 176
Query: 203 NGASFT-------VEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSL 255
+ ++ T V GK YRFR+ ++ + F I GH M ++E + +T S+
Sbjct: 177 SPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSI 236
Query: 256 DVHVGQSYSVLVTMDQPPQDFYIAVSTRFTNKVLT---STGTLHYSNSA 301
+ Q YS ++ +Q +++I + F N T ++ L Y +A
Sbjct: 237 QIFAAQRYSFVLEANQAVDNYWIRANPNFGNVGFTGGINSAILRYDGAA 285
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 205/517 (39%), Gaps = 68/517 (13%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
+T + P G +Q +++NG PGP + D +NV ++L + I W+G
Sbjct: 10 ITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q ++ DG + CPI PG +F Y QV DQ G+++Y + Q G G ++
Sbjct: 70 QHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYC-DGLRGPFVVYD 128
Query: 151 PLIPVP--FPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPS-PDGILINGHGSNGASF 207
P P + D + + DWY H K G R P D LING G +
Sbjct: 129 PNDPHASRYDVDNDDTVITLADWY---HTAAK----LGPRFPGGADATLINGKGRAPSDS 181
Query: 208 TVE-------QGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVG 260
E +GK YRFR+ ++ + F I GH + ++EV+ ++ S+ +
Sbjct: 182 VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAA 241
Query: 261 QSYSVLVTMDQPPQDFYIAVSTRFTNKVLT---STGTLHYSNSAHXXXXXXXXXXTTQID 317
Q YS ++ +Q +++I + F N ++ L Y + TT
Sbjct: 242 QRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAP-------AVEPTTNQT 294
Query: 318 WSLNQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVSFI 377
S+ + + S P P GS G ++ K + A NG + +N SF+
Sbjct: 295 TSVKPLNEVDLHPLVSTPVP---GSPSSGGVD-----KAINMAFNFNGSNFF-INGASFV 345
Query: 378 PADTPLKLADYFKIGGVFRVGSIQDQPTGGNIYLDTSVMGADFRGFIEIVF---QNHENI 434
P P+ L + G + QD G++Y+ S IEI F
Sbjct: 346 PPTVPVLLQ---ILSG---AQTAQDLLPSGSVYVLPS------NASIEISFPATAAAPGA 393
Query: 435 VQSWHIDGYNFWVVGMNGGVWTPASRNEYNLRDAVSRCTTQVYPKSWTAIYVALD--NVG 492
+H+ G+ F VV G T + + RD VS T P + + + D N G
Sbjct: 394 PHPFHLHGHTFAVVRSAGS--TVYNYDNPIFRDVVSTGT----PAAGDNVTIRFDTNNPG 447
Query: 493 MWNVRSEFWARQYLGQQFYLRVYSPVESIRDEYPIPK 529
W + +L F + + ++ P+P+
Sbjct: 448 PWFLHCHI--DFHLEGGFAVVMAEDTPDVKAVNPVPQ 482
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
+T + P G +Q +++NG PGP + D +NV ++L + I W+G
Sbjct: 10 ITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q ++ DG + CPI PG +F Y QV DQ G+++Y + Q G G ++
Sbjct: 70 QHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYC-DGLRGPFVVYD 128
Query: 151 PLIPVP--FPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPS-PDGILINGHGSNGASF 207
P P + D + + DWY H K G R P D LING G +
Sbjct: 129 PNDPHASRYDVDNDDTVITLADWY---HTAAK----LGPRFPGGADATLINGKGRAPSDS 181
Query: 208 TVE-------QGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVG 260
E +GK YRFR+ ++ + F I GH + ++EV+ ++ S+ +
Sbjct: 182 VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAA 241
Query: 261 QSYSVLVTMDQPPQDFYIAVSTRFTN 286
Q YS ++ +Q +++I + F N
Sbjct: 242 QRYSFVLDANQAVDNYWIRANPNFGN 267
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 156/368 (42%), Gaps = 43/368 (11%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
+T P G +Q +++NG PGP + D +NV ++L + + W+G
Sbjct: 10 ITDAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q+ ++ DG + CPI PG +F Y QV +Q G+++Y + Q G G ++
Sbjct: 70 QQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYC-DGLRGPFVVYD 128
Query: 151 PLIPVP--FPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPS-PDGILINGHGSNGASF 207
P P + D + + DWY H K G R P+ D LING G +
Sbjct: 129 PNDPHASRYDVDNDDTVITLADWY---HTAAK----LGPRFPAGADATLINGKGRAPSDT 181
Query: 208 TVE-------QGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVG 260
+ E +GK RFR+ ++ + F I GH + ++EV+ +++ + S+ +
Sbjct: 182 SAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAA 241
Query: 261 QSYSVLVTMDQPPQDFYIAVSTRFTNKVLT---STGTLHYSNSAHXXXXXXXXXXTTQID 317
Q YS ++ +Q +++I + F N ++ L Y + TT
Sbjct: 242 QRYSFVLNANQAVDNYWIRANPNFGNVGFNGGINSAILRYDGAP-------AVEPTTNQT 294
Query: 318 WSLNQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVSFI 377
S+ + + S P P GS G ++ K + A NG + +N SF+
Sbjct: 295 TSVKPLNEVNLHPLVSTPVP---GSPSSGGVD-----KAINMAFNFNGSNFF-INGASFV 345
Query: 378 PADTPLKL 385
P P+ L
Sbjct: 346 PPSVPVLL 353
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 24/264 (9%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
VT +I P G + I++N FP P I DN +N+ N + + I W+G
Sbjct: 10 VTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q+ ++ DG + CPI G +F Y QV Q G+++Y + Q G G ++
Sbjct: 70 QKGTNWADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYC-DGLRGPFVVYD 128
Query: 151 PLIPVPFPEPAGDFTVLI--GDWYKANHNKLKSVLDRGHRLPS-PDGILINGHG------ 201
P P D + +I DWY H K G R P D LING G
Sbjct: 129 PNDPHANLYDVDDESTVITLADWY---HVAAK----LGPRFPKGADSTLINGLGRSTSTP 181
Query: 202 -SNGASFTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVG 260
++ A +V +GK YRFR+ ++ + F I H++ ++E +G T T S+ +
Sbjct: 182 TADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAA 241
Query: 261 QSYSVLVTMDQPPQDFYIAVSTRF 284
Q YS ++ +Q +++I + F
Sbjct: 242 QRYSFVLNANQDVDNYWIRANPNF 265
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 148/366 (40%), Gaps = 34/366 (9%)
Query: 36 NVTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGV 90
++ DI P G + + G FPGP I DN I N L E + I W+G
Sbjct: 10 HIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGE 69
Query: 91 QQRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILS 149
Q+ ++ DG + T CPI G +F+Y V G+Y+Y + Q G G ++
Sbjct: 70 FQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYC-DGLRGPFVVY 128
Query: 150 RPLIPVPFPEPAGDFTVLI--GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGAS- 206
P P D T +I DWY L + G + + D LI+G G +
Sbjct: 129 DPNDPDANLYDVDDDTTIITLADWYHV----LAKEMGAGGAI-TADSTLIDGLGRTHVNV 183
Query: 207 -------FTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHV 259
TVE GK YR R+ ++ + +F I GH M ++E +G + + T + +
Sbjct: 184 AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFA 243
Query: 260 GQSYSVLVTMDQPPQDFYIAVSTRFTNKVLTSTGTLHYSNSAHXXXXXXXXXXTTQIDWS 319
Q YS ++ +QP +++I N G NSA + +
Sbjct: 244 AQRYSFVLNANQPVGNYWIR-----ANPNSGGEGFDGGINSAILRYDGATTADPVTVAST 298
Query: 320 LNQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVSFIPA 379
++ I T+L R G+ H G + + + L + G + +N VSF P
Sbjct: 299 VHTKCLIETDLHPLS-RNGVPGNPHQGGADCNLNLSLGFACG------NFVINGVSFTPP 351
Query: 380 DTPLKL 385
P+ L
Sbjct: 352 TVPVLL 357
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 203/517 (39%), Gaps = 68/517 (13%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
V + P G + I++NG FP P I D +NV ++L + I W+G
Sbjct: 10 VANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q ++ DG + CPI G +F Y V DQ G+++Y + Q G G ++
Sbjct: 70 QAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYC-DGLRGPFVVYD 128
Query: 151 PLIPVP--FPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLP-SPDGILINGHGSNGASF 207
P P + + + DWY + G R P D LING G + ++
Sbjct: 129 PKDPHASRYDVDNESTVITLTDWYH-------TAARLGPRFPLGADATLINGLGRSASTP 181
Query: 208 T-------VEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVG 260
T V+ GK YRFR+ ++ + F I GH + ++EV+G ++ S+ +
Sbjct: 182 TAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAA 241
Query: 261 QSYSVLVTMDQPPQDFYIAVSTRFTNKVLTSTGTLHYS---NSA--HXXXXXXXXXXTTQ 315
Q YS ++ +Q +++I + F GT+ ++ NSA TTQ
Sbjct: 242 QRYSFVLNANQTVGNYWIRANPNF--------GTVGFAGGINSAILRYQGAPVAEPTTTQ 293
Query: 316 IDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVS 375
+ + I TNL P P GS G ++ K + A NG + +N+ S
Sbjct: 294 ---TTSVIPLIETNLHPLARMPVP-GSPTPGGVD-----KALNLAFNFNGTNFF-INNAS 343
Query: 376 FIPADTPLKLADYFKIGGVFRVGSIQDQPTGGNIYLDTSVMGADFRGFIEIVFQN---HE 432
F P P+ L + G + QD G++Y + IEI
Sbjct: 344 FTPPTVPVLLQ---ILSG---AQTAQDLLPAGSVYPLPA------HSTIEITLPATALAP 391
Query: 433 NIVQSWHIDGYNFWVVGMNGGVWTPASRNEYNLRDAVSRCTTQVYPKSWTAIYVALDNVG 492
+H+ G+ F VV G T + N+ RD VS T I DN G
Sbjct: 392 GAPHPFHLHGHAFAVVRSAGS--TTYNYNDPIFRDVVSTGTPAA--GDNVTIRFQTDNPG 447
Query: 493 MWNVRSEFWARQYLGQQFYLRVYSPVESIRDEYPIPK 529
W + +L F + V ++ P+PK
Sbjct: 448 PWFLHCHI--DFHLEAGFAIVFAEDVADVKAANPVPK 482
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 117/266 (43%), Gaps = 24/266 (9%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
+T + P G ++ +++NG P P I D +NV + L + I W+G
Sbjct: 10 LTNAQVSPDGFAREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q+ ++ DG + CPI G +F Y QV DQ G+++Y + Q G G ++
Sbjct: 70 QQGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYC-DGLRGPFVVYD 128
Query: 151 PLIPVP--FPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLP-SPDGILINGHG------ 201
P P + D + + DWY H K G R P D LING G
Sbjct: 129 PNDPHASLYDIDNDDTVITLADWY---HVAAK----LGPRFPFGSDSTLINGLGRTTGIA 181
Query: 202 -SNGASFTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVG 260
S+ A V QGK YRFR+ ++ + F I H M ++E + +T S+ +
Sbjct: 182 PSDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAA 241
Query: 261 QSYSVLVTMDQPPQDFYIAVSTRFTN 286
Q YS ++ QP +++I + F N
Sbjct: 242 QRYSFVLDASQPVDNYWIRANPAFGN 267
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 22/265 (8%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
+T P G +Q +++NG PGP + D +NV ++L + + W+G
Sbjct: 10 ITNAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q+ ++ DG + CPI PG +F Y QV +Q G+++Y + Q G G ++
Sbjct: 70 QQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYC-DGLRGPFVVYD 128
Query: 151 PLIPVP--FPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPSPDGILINGHG---SNGA 205
P P + D T+ + DWY KL G D LING G S+ +
Sbjct: 129 PNDPHASRYDVDNDDTTITLADWYHTAA-KLGPAFPNGA-----DSTLINGKGRAPSDSS 182
Query: 206 S----FTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQ 261
+ +V +GK RFR+ ++ + F I GH ++E + ++ S+ + Q
Sbjct: 183 AQLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQ 242
Query: 262 SYSVLVTMDQPPQDFYIAVSTRFTN 286
YS + +Q +++I + F N
Sbjct: 243 RYSFTLNANQAVDNYWIRANPNFGN 267
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 168/418 (40%), Gaps = 49/418 (11%)
Query: 49 QQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQQRRNSYEDG-VY 102
+ + G P I +D INV + L + + I W+G Q + DG +
Sbjct: 43 RSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF 102
Query: 103 GTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIP--VPFPEP 160
CPI P ++F Y V Q G+Y+Y + Q G G ++ P P +
Sbjct: 103 VNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYC-DGLRGAFVVYDPNDPHLSLYDVD 161
Query: 161 AGDFTVLIGDWYKANHNKLKSVL--DRGHRLPSPDGILINGHGSNGAS--------FTVE 210
+ I DWY + L +VL + P+PD LING G N A+ +V+
Sbjct: 162 DASTVITIADWYHS----LSTVLFPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQ 217
Query: 211 QGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMD 270
GK YRFRI + + F I GH+M ++EV+G T SL + GQ YSV+V +
Sbjct: 218 SGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEAN 277
Query: 271 QPPQDFYIAVSTRFTNKVLTSTGTLHYSNSAHXXXXXXXXXXTTQIDWSLNQARSIRTNL 330
Q +++I + +N TG ++ + + + +LN+A I
Sbjct: 278 QAVGNYWIRANP--SNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLIN 335
Query: 331 TASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRYAVNSVSFIPADTPLKLADYFK 390
+ P P G+ I L G+ + +N FIP P+ L
Sbjct: 336 PGAPGNPVPGGA----------DINLNLRIGRNATTADFTINGAPFIPPTVPVLLQ---I 382
Query: 391 IGGVFRVGSIQDQPTGGNIYLDTSVMGADFRGFIEIVFQNHENIVQSWHIDGYNFWVV 448
+ GV + P G I L + + IEI N +H+ G+NF VV
Sbjct: 383 LSGVTNPNDL--LPGGAVISLPANQV-------IEISIPGGGN--HPFHLHGHNFDVV 429
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 187/467 (40%), Gaps = 56/467 (11%)
Query: 52 ILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-ISWNGVQQRRNSYEDGV-YGTTCPIP 109
I NGQFP PDI D + I + N + + ++G+ Q + DGV + T CPI
Sbjct: 25 ITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIA 84
Query: 110 PGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPFPEPAGDFTVLIG 169
PG Y V +G+Y+Y Q G G+ I+ P + E + ++ +
Sbjct: 85 PGSTMLYNFTVDYNVGTYWYHSHTDGQ-YEDGMKGLFIIKDDSFPYDYDE---ELSLSLS 140
Query: 170 DWYKANHNKLK----SVLDRGHRLPSPDGILINGHGSNGASFTVEQGKTYRFRISNVGLQ 225
+WY L SV + P P +++N + ++ V+ TY RI NVG
Sbjct: 141 EWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNN--TMNLTWEVQPDTTYLLRIVNVGGF 198
Query: 226 HSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLV-TMDQPPQDFYIAVSTRF 284
S F I+ H+M +VE++G T + L + V Q Y+VLV T + ++F A+ +F
Sbjct: 199 VSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNF--AIMQKF 256
Query: 285 TNKVLTSTGTLHYSNSAHXXXXXXXXXXTTQIDWSLNQARSIRTNLTASGPRPNPQGSYH 344
+ +L + N+ TQ N SI L +P + +
Sbjct: 257 DDTMLDVIPSDLQLNATSYMVYNKTAALPTQ-----NYVDSIDNFLDDFYLQPYEKEAI- 310
Query: 345 YGLINISRTIKLESSAGQVNGKQRYA-VNSVSFIPADTPLKLADYFKIGGVFRVGSIQDQ 403
YG I ++ + YA N++++ K+ + V S DQ
Sbjct: 311 YG--EPDHVITVDVVMDNLKNGVNYAFFNNITYTAP----------KVPTLMTVLSSGDQ 358
Query: 404 PTGGNIY-LDTSVMGADFRGFIEIVFQNHENIVQSWHIDGYNFWVVGMN-------GGVW 455
IY +T + +EIV N + +H+ G+ F + + G V
Sbjct: 359 ANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEV- 417
Query: 456 TPASRN--------EYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMW 494
P S + EY +R R T V P+S I DN G+W
Sbjct: 418 -PHSFDPDNHPAFPEYPMR----RDTLYVRPQSNFVIRFKADNPGVW 459
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 18/246 (7%)
Query: 47 VRQQGILINGQFPGPDIYSVTNDNLIINVHNSL-PEPFLISWNGVQQRRNSYEDGVYGTT 105
V+++ +LING GP+I + D + + V N+L I W+G+ Q+ + DG G T
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVT 112
Query: 106 -CPIPP-GKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPFPEPAGD 163
CPIPP G TY + + Q G+ +Y Q G G I+I +P D
Sbjct: 113 ECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDI-----D 166
Query: 164 FTVL-IGDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNG-------ASFTVEQGKTY 215
V I D+Y + L + + P D +LING N A+ T+ GK +
Sbjct: 167 LGVFPITDYYYRAADDLVH-FTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRH 225
Query: 216 RFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMDQPPQD 275
R RI N ++ + H M ++ + T SL + VGQ Y V++ + P +
Sbjct: 226 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDN 285
Query: 276 FYIAVS 281
++ V+
Sbjct: 286 YWFNVT 291
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 18/246 (7%)
Query: 47 VRQQGILINGQFPGPDIYSVTNDNLIINVHNSL-PEPFLISWNGVQQRRNSYEDGVYGTT 105
V+++ +LING GP+I + D + + V N+L I W+G+ Q+ + DG G T
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVT 112
Query: 106 -CPIPP-GKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPFPEPAGD 163
CPIPP G TY + + Q G+ +Y Q G G I+I +P D
Sbjct: 113 ECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDI-----D 166
Query: 164 FTVL-IGDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNG-------ASFTVEQGKTY 215
V I D+Y + L + + P D +LING N A+ T+ GK +
Sbjct: 167 LGVFPITDYYYRAADDLVH-FTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRH 225
Query: 216 RFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMDQPPQD 275
R RI N ++ + H M ++ + T SL + VGQ Y V++ + P +
Sbjct: 226 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDN 285
Query: 276 FYIAVS 281
++ V+
Sbjct: 286 YWFNVT 291
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 18/246 (7%)
Query: 47 VRQQGILINGQFPGPDIYSVTNDNLIINVHNSL-PEPFLISWNGVQQRRNSYEDGVYGTT 105
V+++ +LING GP+I + D + + V N+L I W+G+ Q+ + DG G T
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVT 112
Query: 106 -CPIPP-GKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPFPEPAGD 163
CPIPP G TY + + Q G+ +Y Q G G I+I +P D
Sbjct: 113 ECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDI-----D 166
Query: 164 FTVL-IGDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNG-------ASFTVEQGKTY 215
V I D+Y + L + + P D +LING N A+ T+ GK +
Sbjct: 167 LGVFPITDYYYRAADDLVH-FTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRH 225
Query: 216 RFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMDQPPQD 275
R RI N ++ + H M ++ + T SL + VGQ Y V++ + P +
Sbjct: 226 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDN 285
Query: 276 FYIAVS 281
++ V+
Sbjct: 286 YWFNVT 291
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 180/473 (38%), Gaps = 88/473 (18%)
Query: 37 VTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFL-----ISWNGVQ 91
VT + G + +++NG PGP I D +NV N+L + + W+G
Sbjct: 10 VTNAAVAADGHSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFF 69
Query: 92 QRRNSYEDG-VYGTTCPIPPGKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSR 150
Q+ ++ DG + CPI G +F Y Q G+++Y + Q G G
Sbjct: 70 QKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCDGDRG------- 122
Query: 151 PLIPVPFPEPAGDF--------TVLIGDWYKANHNKLKSVLDRGHRLPS-PDGILINGHG 201
P + +P+ + + + DWY + G P D LING G
Sbjct: 123 PFVVYDPNDPSANLYDVDNLNTVITLTDWYH-------TAAQNGPAKPGGADATLINGQG 175
Query: 202 -------SNGASFTVEQGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSS 254
++ A +V GK YRFR+ + + F I GH+M +++V+ +
Sbjct: 176 RGPSSPSADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLK 235
Query: 255 LDVHVGQSYSVLVTMDQPPQDFYIAVSTR-----FTNKVLTSTGTLHYSNSAHXXXXXXX 309
+ ++ Q YS ++ +Q +++I + FTN + ++ L YS +A
Sbjct: 236 IQIYAAQRYSFILNANQAVNNYWIRANPNQGNVGFTNGI--NSAILRYSGAAATQPTTSQ 293
Query: 310 XXXTTQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAGQVNGKQRY 369
+D +TNL P GS G +N++ + A NG +
Sbjct: 294 TSSVQPLD---------QTNLHPLTATAVP-GSPVAGGVNLAI-----NQAFNFNGTNHF 338
Query: 370 AVNSVSFIPADTPL---------KLADYFKIGGVFRVGSIQDQPTGGNIYLDTSVMGADF 420
V+ SF+P P+ AD G V+ + P+ NI + A
Sbjct: 339 -VDGASFVPPTVPVLSQIVSGAQSAADLLASGLVYSL------PSDANIEISFPATSAAA 391
Query: 421 RGFIEIVFQNHENIVQSWHIDGYNFWVVGMNGGVWTPASRNEYNLRDAVSRCT 473
G +H+ G+ F VV G T + N+ RD VS T
Sbjct: 392 GG------------PHPFHLHGHAFAVVRSAGS--TTYNYNDPIFRDTVSTGT 430
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 42 IYPLGVRQQGI-LINGQFPGPDIYSVTNDNLIINVHNSLP-EPFLISWNGVQQRRNSYED 99
I P GV + + L+N + GP I + DN+ + V N+L + W+G++Q N + D
Sbjct: 88 IGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFND 147
Query: 100 GVYGTT-CPIPP-GKNFTYILQVKDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPF 157
G G T CPIPP G TY + Q G+ +Y Q G G I+I +P+
Sbjct: 148 GANGVTECPIPPKGGRKTYKFRAT-QYGTSWYHSHFSAQYGNGVVGTIQIDGP--ASLPY 204
Query: 158 PEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPSPDGILING---HGSNGA----SFTVE 210
G F ++ D+Y + ++L + + P D +L NG H GA + T+
Sbjct: 205 DIDLGVFPLM--DYYYRSADELVH-FTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLT 261
Query: 211 QGKTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMD 270
GK +R RI N + + GH M ++ + T SSL + VGQ Y V + +
Sbjct: 262 PGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDAN 321
Query: 271 QPPQDFYIAVS 281
P +++ V+
Sbjct: 322 SPVGNYWFNVT 332
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 30/233 (12%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGV-YGTTCPIPPGKN 113
NGQ P P I+ + D++ +NV N P I W+G+ QR DGV + T I PG
Sbjct: 28 NGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDT 87
Query: 114 FTYILQVKDQIGSYFYFPSVGFQKAA---GGFGGIRILSRPLIPVPFPEP-AGDFTVLIG 169
FTY + + G+ +Y V + G +G ++ P P+P + D+ +++
Sbjct: 88 FTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWG--PLIVEPKNPLPIEKTVTKDYILMLS 144
Query: 170 DWYKANHNKLKSVLDRGHRLPSPDGI---LINGHGSNGASF------TVEQGKTYRFRIS 220
DW + NK P GI + + + N SF V++G R R+
Sbjct: 145 DWVSSWANK-----------PGEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLI 193
Query: 221 NVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTY-SSLDVHVGQSYSVLVTMDQP 272
G H GH ++ +G + ++ + G+ Y V++ MD P
Sbjct: 194 GAG-DHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP 245
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 23/236 (9%)
Query: 46 GVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTT 105
G R + G FPGP + D + + + N LPEP + W+G+ V
Sbjct: 32 GQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL-----PISPKVDDPF 86
Query: 106 CPIPPGKNFTYILQV-KDQIGSYFYFPSVGFQKAAGGFGGI---RILSRPLIPVPFPEPA 161
IPPG+++TY V K+ G+++Y P + + A F G+ ++ L +P A
Sbjct: 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREA 146
Query: 162 GDFTVLIGDW-----YKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKTYR 216
+ +++ D A H + + + D +L+NG V Q T R
Sbjct: 147 EEHLLVLKDLALQGGRPAPHTPMDWMNGK-----EGDLVLVNG---ALRPTLVAQKATLR 198
Query: 217 FRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTMDQ 271
R+ N +Q H + L+ +G + S L + G+ VLV + +
Sbjct: 199 LRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK 254
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 91/236 (38%), Gaps = 43/236 (18%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG P P I D L I V N L E I W+GV + +DG PI G+
Sbjct: 76 NGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPD--QDG--SPHDPILAGEER 131
Query: 115 TYILQV-KDQIGSYFYFPSVGFQKAAGGFGGIRILSRPLIPVPFPEPAGDFTVLIGDWYK 173
Y ++ +D G+Y+Y P + + F G+ AG F V+
Sbjct: 132 IYRFEIPQDSAGTYWYHPHPHYTASKQVFMGL---------------AGAF-VIKAKKDA 175
Query: 174 ANHNKLKSV------LDRGHRLPSP-----------DGILINGHGSNGASFTVEQGKTYR 216
+H K K + LD ++P+ + +LING + R
Sbjct: 176 LSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNE----R 231
Query: 217 FRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMDQP 272
RI N LN RIQG K LV +G +T Y ++ + + V V +D P
Sbjct: 232 IRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKE-ELFLSPASRVEVLIDAP 286
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles
Of Various Metal Cation Binding Sites
Length = 1065
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 60 GPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNFTYILQ 119
GP +++ D + I N P+ I +GVQ + T P PG+ TY+ +
Sbjct: 809 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--------TVTPTLPGETLTYVWK 860
Query: 120 VKDQIGS---------YFYFPSVGFQKA--AGGFGGIRILSRPLIPVPFPEPAGDFTVLI 168
+ ++ G+ + Y+ +V K +G G + + RP + V P +F +L
Sbjct: 861 IPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRRKLEFALLF 920
Query: 169 ------GDWYKANHNKLKSVLDRGHRLPSPDGILING---HGSNGASFTVEQGKT 214
WY ++ +K+ D ++ D I H NG F QG T
Sbjct: 921 LVFDENESWYLDDN--IKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGLT 973
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 46 GVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTT 105
G+ +G NG+ PGP +++ D L I+ N+ P I ++GV + + DG G
Sbjct: 51 GIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107
Query: 106 C-PIPPGKNFTYILQVKDQIGSYFYF---PSVGFQKAAGGFGGIRILSRPLIPVPFPEPA 161
I PG++FTY G++ Y + A G +GG + + P PA
Sbjct: 108 AGSIAPGQSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-----PA 161
Query: 162 GDFTVLIGDWYKAN 175
D V++ + Y +
Sbjct: 162 DDEMVMVMNGYNTD 175
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 60 GPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNFTYILQ 119
GP +++ D + I N P+ I +GVQ + T P PG+ TY+ +
Sbjct: 790 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--------TVTPTLPGETLTYVWK 841
Query: 120 VKDQIGS---------YFYFPSVGFQKA--AGGFGGIRILSRPLIPVPFPEPAGDFTVLI 168
+ ++ G+ + Y+ +V K +G G + + RP + V P +F +L
Sbjct: 842 IPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRRKLEFALLF 901
Query: 169 ------GDWYKANHNKLKSVLDRGHRLPSPDGILING---HGSNGASFTVEQGKT 214
WY ++ +K+ D ++ D I H NG F QG T
Sbjct: 902 LVFDENESWYLDDN--IKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGLT 954
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 20/175 (11%)
Query: 110 PGKNFTYILQVKDQIGSYFYFPSV---GFQKAAGGFGGIRILSRPLIPVPFPEPAGDFTV 166
PG+ T+ + Q G Y Y +V G A G +G I + + +P + +F +
Sbjct: 115 PGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP----KVDKEFYI 169
Query: 167 LIGDWYKANHNKLKSV----LDRGHRLPSPDGILINGH-----GSNGASFTVEQGKTYRF 217
+ GD+Y + + +D+ P+ ++ NGH G N + + G+T R
Sbjct: 170 VQGDFYTKGKKGAQGLQPFDMDKA-VAEQPEYVVFNGHVGALTGDN--ALKAKAGETVRM 226
Query: 218 RISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMDQP 272
+ N G +F + G V VEG I S V G S V +D P
Sbjct: 227 YVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIP 281
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 55 NGQFPGPDIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNF 114
NG GP + + ++++N L E + W+G+ + + G G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI---IPPGGKR 97
Query: 115 TYILQVKDQIGSYFYFP----SVGFQKAAGGFGGIRILSRPLIPVPFPEPAG--DFTVLI 168
+ L V + ++ P G Q A G G + I ++ + P+ G D V++
Sbjct: 98 SVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIV 157
Query: 169 GDWYKANHNKLKSVLDRGHRLPSPDGILINGHGSNGASFTVEQGKT--YRFRISNVGLQH 226
D + ++ LD + + G + +NGA + R R+ N
Sbjct: 158 QDKKFSADGQIDYQLD---VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 227 SLNFRIQGHK-MKLVEVEGTHTIQ-TTYSSLDVHVGQSYSVLVTM-DQPPQDF 276
SLNF ++ + ++ +G + S L V +G+ + VLV + D P D
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDL 267
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 23 VARAE--SPYRFFTWNVTYGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVHNSLP 80
V R E +P TY + G +G+L P I + + + N L
Sbjct: 4 VKRPETSAPVPPLIKEATYIEATASGYMAEGVL------NPTIILRRGQRVDMTLKNKLT 57
Query: 81 EPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNFTYILQVKDQIGSYFYFP 131
EP ++ W+G N + D + I PG+++ Y V ++ G+Y Y P
Sbjct: 58 EPTIVHWHGFDV--NWHNDA--HPSFAITPGESYNYSFDVVNRAGTYLYHP 104
>pdb|3DKP|A Chain A, Human Dead-Box Rna-Helicase Ddx52, Conserved Domain I In
Complex With Adp
Length = 245
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 157 FPEPAGDFTVLIGDWYKANHNKLKSVLDRGHRLPSP---DGILINGHGSN-GASFTVEQG 212
P+P F L YK N L+++LD G ++P+P I + HG AS G
Sbjct: 20 LPDPIATFQQL-DQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSG 78
Query: 213 KTYRFRI 219
KT F I
Sbjct: 79 KTLAFSI 85
>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|B Chain B, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|C Chain C, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|D Chain D, Crystal Structure Of The Wd Repeat-Containing Protein 61
Length = 321
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 213 KTYRFRISNVGLQHSLNFRIQGHKMKLVEVEGTHTIQ-TTYSSLDVHV 259
K +++R + LQ SL +GH++ +V V+ +HT+ SSLD H+
Sbjct: 61 KVWKWRDERLDLQWSL----EGHQLGVVSVDISHTLPIAASSSLDAHI 104
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,548,786
Number of Sequences: 62578
Number of extensions: 795536
Number of successful extensions: 2673
Number of sequences better than 100.0: 53
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2559
Number of HSP's gapped (non-prelim): 67
length of query: 545
length of database: 14,973,337
effective HSP length: 104
effective length of query: 441
effective length of database: 8,465,225
effective search space: 3733164225
effective search space used: 3733164225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)