Query 009055
Match_columns 545
No_of_seqs 165 out of 216
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 17:48:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009055.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009055hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i4da_ a.238.1.2 (A:) Arfapti 73.4 5.6 0.00041 33.6 8.3 81 462-542 105-188 (200)
2 d2efla1 a.238.1.4 (A:1-288) Fo 58.3 52 0.0038 28.6 12.2 49 460-508 127-183 (288)
3 d1urua_ a.238.1.1 (A:) Amphiph 45.2 67 0.0049 26.7 10.3 71 446-516 92-172 (217)
4 d1bu2a2 a.74.1.1 (A:149-250) V 38.1 4.8 0.00035 31.8 1.1 13 527-539 18-30 (102)
5 d2efka1 a.238.1.4 (A:10-288) C 28.9 1.6E+02 0.012 25.0 11.3 29 457-485 115-143 (279)
6 d1h7ca_ a.7.5.1 (A:) Tubulin c 24.8 1.5E+02 0.011 23.3 9.3 46 493-538 53-98 (103)
7 d1qsda_ a.7.5.1 (A:) Tubulin c 24.3 1.6E+02 0.012 23.3 9.3 31 493-523 51-81 (102)
8 d2elba1 a.238.1.1 (A:6-273) DC 17.1 2.9E+02 0.021 23.7 9.6 39 450-488 110-149 (268)
9 d1zyma1 a.60.10.1 (A:22-144) E 16.3 2.1E+02 0.015 22.5 7.6 49 493-541 25-76 (123)
10 d1mwqa_ d.58.4.7 (A:) Hypothet 14.4 31 0.0022 26.9 1.6 23 27-49 15-37 (100)
No 1
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.38 E-value=5.6 Score=33.64 Aligned_cols=81 Identities=20% Similarity=0.155 Sum_probs=50.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhhhc---CCCchhhHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhccchhhHHHHHH
Q 009055 462 DEVKASEMIRREYDSKCRILRQLESK---GVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLI 538 (545)
Q Consensus 462 ~EVKa~E~~R~~ydKKc~~Lr~qd~k---Gad~~kiDkTRa~Vk~L~SrI~Vaiq~vdsiS~~I~kLRDeEL~PQL~ELi 538 (545)
+.+|.-++.+..||+.+..|.++-.+ +....++..+...+.....+..-.-.-+-.--.+++.-|-.++.+||..++
T Consensus 105 ~~~kk~~~~~~dyd~~~~k~~~~~~~~~~~~~~~kl~~ae~~~~~a~~~fe~~~~~~~~~l~~l~~~r~~~~~~~l~~~~ 184 (200)
T d1i4da_ 105 MTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFH 184 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33467788899999999888776433 344456777777777666666555444444444555556688999999999
Q ss_pred hhhc
Q 009055 539 EGYA 542 (545)
Q Consensus 539 ~GL~ 542 (545)
+.+.
T Consensus 185 ~~~~ 188 (200)
T d1i4da_ 185 NAVS 188 (200)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 2
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.34 E-value=52 Score=28.58 Aligned_cols=49 Identities=16% Similarity=0.266 Sum_probs=28.9
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhc--------CCCchhhHHHHHHHHHHhhHH
Q 009055 460 LYDEVKASEMIRREYDSKCRILRQLESK--------GVSSHKIDKTRAVVKDLHSRI 508 (545)
Q Consensus 460 LY~EVKa~E~~R~~ydKKc~~Lr~qd~k--------Gad~~kiDkTRa~Vk~L~SrI 508 (545)
|-+-++.-++.+..|.+.|+.+.+.... +....+++|.+.-......+.
T Consensus 127 ~~~~~~~l~k~k~~Y~~~~~e~e~~~~~~~~~~~~~~~~~~~~~K~~~k~~~~~~~~ 183 (288)
T d2efla1 127 IETCWKQLESSKRRFERDCKEADRAQQYFEKMDADINVTKADVEKARQQAQIRHQMA 183 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 4444456788899999998776543322 333455666555555444433
No 3
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=45.16 E-value=67 Score=26.71 Aligned_cols=71 Identities=10% Similarity=0.168 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcCC---Cc-------hhhHHHHHHHHHHhhHHHHHHHHH
Q 009055 446 HASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESKGV---SS-------HKIDKTRAVVKDLHSRIKVAIHRI 515 (545)
Q Consensus 446 hsSTLdrLyAWEKKLY~EVKa~E~~R~~ydKKc~~Lr~qd~kGa---d~-------~kiDkTRa~Vk~L~SrI~Vaiq~v 515 (545)
....|.++..==+...+-+|..++.++.|++-...|.++-.+.. +. .+++.+|..-..|...+...++.+
T Consensus 92 v~~pL~~~~~~~~~~~~~~kkr~~~~~dyd~~~~~l~k~~~k~~~~~~~~~l~~~e~~~~~a~~~fe~~~~~l~~el~~~ 171 (217)
T d1urua_ 92 VLIPLNTYTGQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNTELHDELPAL 171 (217)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555432233445556789999999998887777665543 22 355666666666666666666554
Q ss_pred H
Q 009055 516 D 516 (545)
Q Consensus 516 d 516 (545)
.
T Consensus 172 ~ 172 (217)
T d1urua_ 172 Y 172 (217)
T ss_dssp H
T ss_pred H
Confidence 4
No 4
>d1bu2a2 a.74.1.1 (A:149-250) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=38.11 E-value=4.8 Score=31.84 Aligned_cols=13 Identities=31% Similarity=0.437 Sum_probs=10.8
Q ss_pred ccchhhHHHHHHh
Q 009055 527 DKELQPQLEDLIE 539 (545)
Q Consensus 527 DeEL~PQL~ELi~ 539 (545)
-|||||||.|+..
T Consensus 18 pe~~wpql~e~~s 30 (102)
T d1bu2a2 18 PEDLWPQLYEAAS 30 (102)
T ss_dssp CTTSHHHHHHHHH
T ss_pred cHHHhHHHHHHHH
Confidence 4899999999853
No 5
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.86 E-value=1.6e+02 Score=24.99 Aligned_cols=29 Identities=21% Similarity=0.434 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhhh
Q 009055 457 ERKLYDEVKASEMIRREYDSKCRILRQLE 485 (545)
Q Consensus 457 EKKLY~EVKa~E~~R~~ydKKc~~Lr~qd 485 (545)
+|.|-+-+..-++.|..|++.|+.+.++.
T Consensus 115 ~k~l~~~~~~~~k~k~~y~~~~~e~e~~~ 143 (279)
T d2efka1 115 QQQLENGFKQLENSKRKFERDCREAEKAA 143 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444456788888998887775543
No 6
>d1h7ca_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.83 E-value=1.5e+02 Score=23.32 Aligned_cols=46 Identities=15% Similarity=0.289 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhccchhhHHHHHH
Q 009055 493 KIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLI 538 (545)
Q Consensus 493 kiDkTRa~Vk~L~SrI~Vaiq~vdsiS~~I~kLRDeEL~PQL~ELi 538 (545)
.++.|+.+|-+...||.-++.-...+-..=..+.|.|-|-+=.+.|
T Consensus 53 vl~Es~~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~~~A~~~l 98 (103)
T d1h7ca_ 53 ILQESRMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVL 98 (103)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHCCCcCchHHHHHHHHHH
Confidence 4567888888999999988887777655445566655554443333
No 7
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast (Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Probab=24.30 E-value=1.6e+02 Score=23.28 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=23.9
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 009055 493 KIDKTRAVVKDLHSRIKVAIHRIDSISKRIE 523 (545)
Q Consensus 493 kiDkTRa~Vk~L~SrI~Vaiq~vdsiS~~I~ 523 (545)
.++-|+.+|-+++.||.-|+.-+..+-..-+
T Consensus 51 vL~Es~~mipd~~~RL~~a~~~L~~~l~~~~ 81 (102)
T d1qsda_ 51 VLDDTKRLLPTLYEKIREFKEDLEQFLKTYQ 81 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHcC
Confidence 4567888899999999988888877754433
No 8
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.14 E-value=2.9e+02 Score=23.74 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHhhhhcC
Q 009055 450 LDRLYAWERKLYDEVK-ASEMIRREYDSKCRILRQLESKG 488 (545)
Q Consensus 450 LdrLyAWEKKLY~EVK-a~E~~R~~ydKKc~~Lr~qd~kG 488 (545)
|+.++-=.-|-|.|+| .-|+++..||....+..++..+.
T Consensus 110 L~~f~~~di~~~ke~kk~fek~~~~yd~~l~k~~~~~k~k 149 (268)
T d2elba1 110 ITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKR 149 (268)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 3333333344444444 34778888888777776664443
No 9
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=16.35 E-value=2.1e+02 Score=22.48 Aligned_cols=49 Identities=18% Similarity=0.234 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHhhHHHHHH--HHHHHHHHHhhhhhccchhhHHHHHHh-hh
Q 009055 493 KIDKTRAVVKDLHSRIKVAI--HRIDSISKRIEELRDKELQPQLEDLIE-GY 541 (545)
Q Consensus 493 kiDkTRa~Vk~L~SrI~Vai--q~vdsiS~~I~kLRDeEL~PQL~ELi~-GL 541 (545)
.+++|+..++.|..++.-.. ....-+..-|.=|.|++|.-++.++|. |.
T Consensus 25 A~~~~~~~L~~l~~~~~~~~~~e~a~If~ah~~iL~D~~l~~~v~~~I~~~~ 76 (123)
T d1zyma1 25 GRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKH 76 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCchHHHHHHHHHHccC
Confidence 77888888888888876543 334445778899999999999999994 53
No 10
>d1mwqa_ d.58.4.7 (A:) Hypothetical protein HI0828 {Haemophilus influenzae [TaxId: 727]}
Probab=14.39 E-value=31 Score=26.87 Aligned_cols=23 Identities=17% Similarity=0.378 Sum_probs=19.7
Q ss_pred HHHhhhHHHHhHHHHHHHHHHHH
Q 009055 27 ALDGRCSLAATHVMYVQSLRNTG 49 (545)
Q Consensus 27 av~~R~~laaaH~~Y~~SL~~vg 49 (545)
+++.|.++-.+|.+|++.+..-|
T Consensus 15 ~~~~R~~~r~~H~~~l~~~~~~g 37 (100)
T d1mwqa_ 15 TLEKRLAVREQHLARLKQLQAEN 37 (100)
T ss_dssp CHHHHHHTHHHHHHHHHHHHHTT
T ss_pred cHHHHHHhhHHHHHHHHHHHhcC
Confidence 46789999999999999987654
Done!