Query 009064
Match_columns 545
No_of_seqs 190 out of 1631
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 18:00:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ip4_A Glutamyl-tRNA(Gln) amid 100.0 1E-112 4E-117 905.9 43.6 481 46-538 2-485 (485)
2 3h0l_A Glutamyl-tRNA(Gln) amid 100.0 2E-110 6E-115 884.8 42.2 473 47-536 2-476 (478)
3 3kfu_E Glutamyl-tRNA(Gln) amid 100.0 1E-108 4E-113 868.4 39.1 466 50-537 1-467 (471)
4 2gi3_A Glutamyl-tRNA(Gln) amid 100.0 5E-105 2E-109 846.3 30.9 462 44-534 4-466 (476)
5 2dc0_A Probable amidase; struc 100.0 1E-103 4E-108 824.8 39.8 426 50-529 1-433 (434)
6 3a2q_A 6-aminohexanoate-cyclic 100.0 5E-103 2E-107 834.2 41.7 455 45-538 4-483 (493)
7 1m22_A Peptide amidase, PAM; e 100.0 1E-102 3E-107 833.4 42.9 465 45-538 6-492 (503)
8 3a1k_A Amidase; AS family enzy 100.0 7E-101 2E-105 819.1 21.3 483 49-545 12-517 (521)
9 1o9p_A Malonamidase E2; malona 100.0 2.3E-97 8E-102 772.0 37.8 409 50-531 2-412 (414)
10 3ppm_A Fatty-acid amide hydrol 100.0 8.7E-98 3E-102 797.6 34.3 462 45-534 66-571 (573)
11 3shg_B VBHA; ampylation, adeny 59.7 12 0.00041 26.3 4.0 29 51-79 31-59 (61)
12 2kvu_A MKL/myocardin-like prot 53.2 14 0.00049 27.3 3.8 39 42-80 21-59 (75)
13 1zrj_A E1B-55KDA-associated pr 30.2 27 0.00092 23.7 2.0 36 45-80 8-43 (50)
14 3hno_A Pyrophosphate-dependent 28.6 78 0.0027 31.9 6.0 65 68-137 91-157 (419)
15 1h1j_S THO1 protein; SAP domai 27.8 28 0.00096 23.7 1.7 36 45-80 3-38 (51)
16 2do1_A Nuclear protein HCC-1; 23.6 54 0.0018 22.7 2.6 37 44-80 7-43 (55)
17 3n2l_A OPRT, oprtase, orotate 21.3 3.8E+02 0.013 24.5 8.8 20 149-168 160-179 (238)
18 2hig_A 6-phospho-1-fructokinas 20.6 1.1E+02 0.0037 31.5 5.3 61 72-137 180-242 (487)
No 1
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A
Probab=100.00 E-value=1.2e-112 Score=905.89 Aligned_cols=481 Identities=47% Similarity=0.805 Sum_probs=439.0
Q ss_pred CCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHH-HcCCCCCCccccEEEeec
Q 009064 46 SPPESQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKI-KRNENVGPLAGVLVGVKD 123 (545)
Q Consensus 46 ~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~-~~g~~~gpL~GiPi~vKD 123 (545)
++..+|+.+|+++|++|++|++||+++||+||+++|+.+|||+++ .|+|+++|+++|+++ ++|+. ||||||||+|||
T Consensus 2 ~l~~~~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~~d~~~~~~g~~-gpL~GvPi~vKD 80 (485)
T 3ip4_A 2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMD-GKLFGIPMGIKD 80 (485)
T ss_dssp CGGGCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHTTCCC-STTTTCEEEEET
T ss_pred CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHHHHHhcCCC-CCcCCCEEEEEc
Confidence 467889999999999999999999999999999999999999999 889999999999999 78988 999999999999
Q ss_pred CccCCCCcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 009064 124 NICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGGSAA 203 (545)
Q Consensus 124 ~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~Gsaa 203 (545)
+|+|+|++||+||..++++++.+|+++|+|||+||||++||||||||+++.++.|++||+|+||||+.|+|||||||||+
T Consensus 81 ~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n~~~G~t~NP~~~~~~pGGSSgGsAa 160 (485)
T 3ip4_A 81 NIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA 160 (485)
T ss_dssp TBCBTTBCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHH
T ss_pred CcccCCCccCCCChhhcCCCCCCCcHHHHHHHHCCCEEEEecCCcccccCCCCCCCCCCCcCCccccCcCCCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhCCCCCCCCc
Q 009064 204 AVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISGHDRLDATS 283 (545)
Q Consensus 204 aVaag~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g~d~~d~~s 283 (545)
+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|+|+|+.|+.+
T Consensus 161 aVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~p~~~sld~~Gp~aRsv~D~a~~l~vl~g~d~~d~~~ 240 (485)
T 3ip4_A 161 AVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS 240 (485)
T ss_dssp HHHTTSCSEEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSHHHHHHHHHHHBSCCTTCTTS
T ss_pred HhhcCCCceeeeccCCcchhhhHHHhCCeeecCCCCcccCCCCCCcccccceeccccCCHHHHHHHHHHhcCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCcchHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccchhHHHHHHH
Q 009064 284 SKQEVPDFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFSLGLPAYYILA 363 (545)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~~~~~~~~~l~ 363 (545)
...+.++|...+ ..+++++||||+.+++...++++++++++++++.|+++|++|+++++|.+++....++.++
T Consensus 241 ~~~~~~~~~~~~-------~~~~~~lrigv~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~ 313 (485)
T 3ip4_A 241 APVDDVDFTSEI-------GKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIA 313 (485)
T ss_dssp CCCCCCCCSTTT-------TCCCTTCEEEEEGGGGSTTSCHHHHHHHHHHHHHHHHTTCEEEEECCTTGGGHHHHHHHHH
T ss_pred cccCccchhhhh-------ccCccCcEEEEECCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCcHHHHHHHHHHHH
Confidence 777766675544 4578899999999877678999999999999999999999999999998887788889999
Q ss_pred HHhhhhcccccccccccCcch-hhhHHHHHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhh
Q 009064 364 SSESSSNLSRYDGVRYGNQAA-AEDLNALYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQKSFKTAL 442 (545)
Q Consensus 364 ~~e~~~~l~~~~~~~~g~~~~-~~~l~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~ 442 (545)
..|...++.+|++..++.+.. .+++.+++...+.+.+.++++.++..+.......+.+.+|.++++.|..+++.|.++|
T Consensus 314 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~ 393 (485)
T 3ip4_A 314 SSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVF 393 (485)
T ss_dssp HHHHHHHTTTCSSSSSSCCCTTCCSHHHHHHHHHHHHSCHHHHHHHHHHHHHHSTTTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhccccccccccHHHHHHhhhhhhcCHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998877766533 4556666655555568999999988876555555555678999999999999999999
Q ss_pred ccCCEEEecCCCCCccccCcccCCcccccccccccccccccCCCeEEecCcccCCCCCCCCeEEEEEcCCCCHHHHHHHH
Q 009064 443 DENDILISPAAPSAAYKIGEKKNDPLAMYSGDIMTVNVNLAGLPALVLPCGFVEGGPIGLPVGLQMIGAAFDEGKLLKVG 522 (545)
Q Consensus 443 ~~~DvLl~Pt~p~~a~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~~~~~~~GlPvGvQlvg~~~~D~~LL~~a 522 (545)
+++|+||+|++|.+||++++...++...+....||.+||++|+|+++||+|+. +|||+||||+|++|+|+.||++|
T Consensus 394 ~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~----~GlPvGlqlvg~~~~d~~lL~~A 469 (485)
T 3ip4_A 394 ENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQS----NGRPIGLQFIGKPFDEKTLYRVA 469 (485)
T ss_dssp TTCSEEEEESSSSSCCBTTTSTTCHHHHHGGGTTTHHHHHHTCCEEEEEEEEE----TTEEEEEEEECSTTCHHHHHHHH
T ss_pred hcCCEEEeCCCCCCCCCcccccCChHHHhhhhhhhhhhHhhCCCeEEEeCCcC----CCCCEeEEEEcCCCCHHHHHHHH
Confidence 99999999999999999987655554444445689999999999999999998 59999999999999999999999
Q ss_pred HHHHHHcCCCCCCCcc
Q 009064 523 HIFEQTLQGCRFVPPL 538 (545)
Q Consensus 523 ~~lE~~~~~~~~~P~~ 538 (545)
++||+.++|+++.|++
T Consensus 470 ~~lE~~~~~~~~~p~~ 485 (485)
T 3ip4_A 470 YQYETQYNLHDVYEKL 485 (485)
T ss_dssp HHHHHHSCCTTTGGGC
T ss_pred HHHHHhcCcccCCCCC
Confidence 9999999998777764
No 2
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A*
Probab=100.00 E-value=1.8e-110 Score=884.84 Aligned_cols=473 Identities=48% Similarity=0.827 Sum_probs=432.5
Q ss_pred CCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHHHcCCCCCCccccEEEeecCc
Q 009064 47 PPESQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNI 125 (545)
Q Consensus 47 ~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vKD~~ 125 (545)
+..+|+.+|+++|++|++|++||+++||+||+++|+.+|||+++ .|+|+++|+++|++ .||||||||+|||+|
T Consensus 2 l~~~sa~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~~d~~------~gpL~GvPi~vKD~~ 75 (478)
T 3h0l_A 2 LWKKSLSELRELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKER------ELPLFGIPIAVKDNI 75 (478)
T ss_dssp CTTSCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHTCCCT------TSTTTTCEEEEETTB
T ss_pred CCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCcCcEEEEeChHHHHHHHHhhchh------cCCcCCceEEEEcCc
Confidence 56789999999999999999999999999999999999999999 88999999999975 589999999999999
Q ss_pred cCCCCcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 009064 126 CTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGGSAAAV 205 (545)
Q Consensus 126 ~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~GsaaaV 205 (545)
+|+|++||+||..+.++++.+|+++|+|||+||||++||||||||+++.++.|+.||+|+||||+.++|||||||||++|
T Consensus 76 ~~~G~~tt~Gs~~~~~~~~~~da~~V~rL~~aGaii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaaV 155 (478)
T 3h0l_A 76 LVEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPWDLERVPGGSSGGSAASV 155 (478)
T ss_dssp CCTTSBCCTTCGGGTTCBCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCCTTCTTBCCCSSSHHHHHHH
T ss_pred cCCCCCcCCcCHhhcCCCCCCCHHHHHHHHHCCCEEEEEeCchhhhcCCCCCCCCCCCcCCCccCCCCCCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhCCCCCCCCcCC
Q 009064 206 SARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISGHDRLDATSSK 285 (545)
Q Consensus 206 aag~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g~d~~d~~s~~ 285 (545)
|+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|+|+|+.|+.+..
T Consensus 156 Aag~~~~a~GtDtgGSiR~PAa~cGv~GlKPT~G~v~~~g~~~~~~~~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~~~~ 235 (478)
T 3h0l_A 156 AVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVALVLEVISGWDEKDSTSAK 235 (478)
T ss_dssp HHTSSSCEEEECSSSTTHHHHHHHTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSHHHHHHHHHHHBSCCTTCTTSCC
T ss_pred HCCCCceeeecCCCCcchhhhHHhCCeeEeCCCCcccCCCCCCCccCCCeecceeCCHHHHHHHHHHhcCCCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred CCCcchHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccchhHHHHHHHHH
Q 009064 286 QEVPDFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFSLGLPAYYILASS 365 (545)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~~~~~~~~~l~~~ 365 (545)
.+.++|...+ ..+++++||||+.+++...++|+++++++++++.|+++|++|+++++|.+++....|+.++..
T Consensus 236 ~p~~~~~~~~-------~~~~~~lrIgv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~v~~p~~~~~~~~~~~~~~~ 308 (478)
T 3h0l_A 236 VPVPEWSEEV-------KKEVKGLKIGLPKEFFEYELQPQVKEAFENFIKELEKEGFEIKEVSLPHVKYSIPTYYIIAPS 308 (478)
T ss_dssp CCCCCHHHHT-------TCCCTTCEEEEEGGGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEECCTTGGGHHHHHHHHHHH
T ss_pred cCccchhhhh-------ccCCCCCEEEEECCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCcHHHHHHHHHHHHHH
Confidence 7777787665 557889999999988767899999999999999999999999999999888888888999999
Q ss_pred hhhhcccccccccccCcch-hhhHHHHHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 009064 366 ESSSNLSRYDGVRYGNQAA-AEDLNALYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQKSFKTALDE 444 (545)
Q Consensus 366 e~~~~l~~~~~~~~g~~~~-~~~l~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~~~ 444 (545)
|+..++.+|++..++.+.. ..++.+++...+.+.+.++++.++..+.+.....+.+.+|.++++.|+.+++.|.++|++
T Consensus 309 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~ 388 (478)
T 3h0l_A 309 EASSNLARYDGVRYGYRAKEYKDIFEMYARTRDEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQKVRRLITNDFLKAFEE 388 (478)
T ss_dssp HHHHHTTTCSSSSSSCCCSCCSSHHHHHHHHHHHHSCHHHHHHHHHHHHHTSTTTTTTTHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhhhhhhcccccccccHHHHHHHhhhhhcCHHHHHHHHhhchhccchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999887766532 345666666555556899999999888665555555567899999999999999999999
Q ss_pred CCEEEecCCCCCccccCcccCCcccccccccccccccccCCCeEEecCcccCCCCCCCCeEEEEEcCCCCHHHHHHHHHH
Q 009064 445 NDILISPAAPSAAYKIGEKKNDPLAMYSGDIMTVNVNLAGLPALVLPCGFVEGGPIGLPVGLQMIGAAFDEGKLLKVGHI 524 (545)
Q Consensus 445 ~DvLl~Pt~p~~a~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~~~~~~~GlPvGvQlvg~~~~D~~LL~~a~~ 524 (545)
+|+||+|++|.+||++++...++...+....||.+||++|+|+++||+|+ . +|||+||||||++|+|+.||++|++
T Consensus 389 ~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~---~GlPvGlQlvg~~~~D~~LL~~A~~ 464 (478)
T 3h0l_A 389 VDVIASPTTPTLPFKFGERLENPIEMYLSDILTVPANLAGLPAISIPIAW-K---DGLPVGGQLIGKHWDETTLLQISYL 464 (478)
T ss_dssp CSEEEEESCSSSCCBTTTTSSSHHHHHGGGTTTHHHHHHTCCEEEEEEEE-E---TTEEEEEEEEECTTCHHHHHHHHHH
T ss_pred CCEEEcCCCCCCCCCcccccCChHhhhhhhhhhhhhHhhCCCeEEEeCCC-C---CCCCeEEEEECCCCCHHHHHHHHHH
Confidence 99999999999999998765555444444568999999999999999999 4 7999999999999999999999999
Q ss_pred HHHHcCCCCCCC
Q 009064 525 FEQTLQGCRFVP 536 (545)
Q Consensus 525 lE~~~~~~~~~P 536 (545)
||+.++|+++.|
T Consensus 465 lE~~~~~~~~~p 476 (478)
T 3h0l_A 465 WEQKFKHYEKIP 476 (478)
T ss_dssp HHHHSCGGGCCS
T ss_pred HHHhcCcccCCC
Confidence 999999876544
No 3
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-108 Score=868.38 Aligned_cols=466 Identities=50% Similarity=0.820 Sum_probs=421.5
Q ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEecCHHHHHHHHhhhHHHHcCCCCCCccccEEEeecCccCCC
Q 009064 50 SQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVD 129 (545)
Q Consensus 50 ~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vKD~~~v~g 129 (545)
|++.+|+++|++|++|++||+++||+||+++|+.+|||+++.|+|+++|+++|+++ |||||||+|||+|+|+|
T Consensus 1 ~~a~~l~~~~~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~al~~A~~~d~~~-------pL~GvPi~vKD~~~~~G 73 (471)
T 3kfu_E 1 MLAHEIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLSLNERLLEEAEAVDPGL-------PLAGLVVAVKDNIATRG 73 (471)
T ss_dssp -CHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECCTTTHHHHTSCCSC-------TTTTCEEEEETTBCCTT
T ss_pred CcHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCccEEEEeCHHHHHHHHhcCccC-------CcCCCeEEEECCcccCC
Confidence 68999999999999999999999999999999999999999888999999999653 99999999999999999
Q ss_pred CcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhCC
Q 009064 130 MPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGGSAAAVSARQ 209 (545)
Q Consensus 130 ~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~GsaaaVaag~ 209 (545)
++||+||..+.++++.+|+++|++||++|||++||||||||+++.++.|+.||+|+||||+.++|||||||||++||+|+
T Consensus 74 ~~tt~Gs~~~~~~~~~~da~~V~rL~~aGaii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaaVAag~ 153 (471)
T 3kfu_E 74 LRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADL 153 (471)
T ss_dssp SCCCTTCSTTTTCCCSSCCHHHHHHHTTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHHHHHTTS
T ss_pred ccccccCHhHcCCCCCCChHHHHHHHHCCCEEEeecCcCchhcCCCCCCCCCCCcCCCCccCcCCCCCcHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhCCCCCCCCcCCCCCc
Q 009064 210 CVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISGHDRLDATSSKQEVP 289 (545)
Q Consensus 210 ~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g~d~~d~~s~~~~~~ 289 (545)
+++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|+|+|+.|+.+...+ +
T Consensus 154 ~~~a~GtDtgGSiR~PAa~cGv~GlKPT~G~v~~~g~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~-~ 232 (471)
T 3kfu_E 154 APLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLMDAAAGPDPLDATSLDLP-P 232 (471)
T ss_dssp CSEEEEEESSSTTHHHHHHTTCEEEECCTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHCSCCTTCTTCCCCC-C
T ss_pred CccccccCCCCccccChhhcCceeeeCCCCCccCCCCCCcccccCeecceeCCHHHHHHHHHHhcCCCcccccccCCC-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998877665 5
Q ss_pred chHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccchhHHHHHHHHHhhhh
Q 009064 290 DFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFSLGLPAYYILASSESSS 369 (545)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~~~~~~~~~l~~~e~~~ 369 (545)
.|...+ ..+++++||||+.+++ ..++|+++++++++++.|+++|++|+++++|.+.+....++.++..|+..
T Consensus 233 ~~~~~~-------~~~~~~lrIgv~~~~~-~~~~p~v~~a~~~a~~~L~~~G~~v~~v~~p~~~~~~~~~~~~~~~e~~~ 304 (471)
T 3kfu_E 233 RFQEAL-------EGPLPPLRLGVVREAL-AGNSPGVERALEEALKVFRELGLSVREVSWPSLPQALAAYYILAPAEASS 304 (471)
T ss_dssp CTTCCS-------CCCCSSCEEEEEGGGT-TTCCHHHHHHHHHHHHHHHTTTCEEEEECCTTGGGHHHHHHHHHHHHHHH
T ss_pred chhhhh-------ccCCCCCEEEEECCcc-CCCCHHHHHHHHHHHHHHHHcCCeeeeecCccHHHHHHHHHHHHHHHHHH
Confidence 554333 3467899999999887 78999999999999999999999999999998888888889999999999
Q ss_pred cccccccccccCcchhhhHHHHHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhhccCCEEE
Q 009064 370 NLSRYDGVRYGNQAAAEDLNALYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQKSFKTALDENDILI 449 (545)
Q Consensus 370 ~l~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~~~~DvLl 449 (545)
++.+|++..++.+.....+.+++...+.. ++++++.++..+.......++..+|.++++.|..+++.|.++|+++|+||
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~Dvll 383 (471)
T 3kfu_E 305 NLARYDGTLYGRRAAGEEVEGMMEATRAL-FGLEVKRRVLVGTFVLSSGYYEAYYGRAQAFRRRLKAEAQALFREVDLLL 383 (471)
T ss_dssp HGGGCSTTTTSCCCCCSSSHHHHHHHHTT-SCHHHHHHHHHHHHHHSTTTTTTTHHHHHHHHHHHHHHHHHHTTTCSEEE
T ss_pred HHHHhhhhccccccchhhHHHHHHhhhhh-cCHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 99999987776653223455556555555 89999999888866555445556799999999999999999999999999
Q ss_pred ecCCCCCccccCcccCCcccccccccccccccccCCCeEEecCcccCCCCCCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Q 009064 450 SPAAPSAAYKIGEKKNDPLAMYSGDIMTVNVNLAGLPALVLPCGFVEGGPIGLPVGLQMIGAAFDEGKLLKVGHIFEQTL 529 (545)
Q Consensus 450 ~Pt~p~~a~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~~~~~~~GlPvGvQlvg~~~~D~~LL~~a~~lE~~~ 529 (545)
+|++|.+||++++... +...+....||.+||++|+|+++||+|+ . +|||+||||+|++|+|+.||++|++||+++
T Consensus 384 ~Pt~~~~a~~~~~~~~-~~~~~~~~~~t~~~nl~G~PaisvP~g~-~---~GlPvGlQlvg~~~~D~~LL~~A~~lE~~~ 458 (471)
T 3kfu_E 384 LPTTPHPAFPFGARRD-PLAMYREDLYTVGANLTGLPALSFPAGF-E---GHLPVGLQLLAPWGEDERLLRAALAFEEAT 458 (471)
T ss_dssp EESCSSSCCBTTTTCS-HHHHHGGGTTTHHHHHHCCCEEEEEEEE-E---TTEEEEEEEECSTTCHHHHHHHHHHHHHHS
T ss_pred eCCcCCCCCccccccc-hHHHHHHhhhhhcchhhCCCeEEEeCCC-C---CCCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 9999999999987432 4333444458999999999999999999 6 899999999999999999999999999999
Q ss_pred -CCCCCCCc
Q 009064 530 -QGCRFVPP 537 (545)
Q Consensus 530 -~~~~~~P~ 537 (545)
+|+++.|+
T Consensus 459 g~w~~~~p~ 467 (471)
T 3kfu_E 459 ARAHLKAPL 467 (471)
T ss_dssp SCCCCCTTC
T ss_pred cCcccCCCc
Confidence 88777665
No 4
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A*
Probab=100.00 E-value=4.9e-105 Score=846.35 Aligned_cols=462 Identities=47% Similarity=0.770 Sum_probs=393.2
Q ss_pred CCCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHHHcCCCCCCccccEEEee
Q 009064 44 STSPPESQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVK 122 (545)
Q Consensus 44 ~~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vK 122 (545)
+.++..+|+.+| |++|++|++||+++||+||+++|+.+|||+++ .++|+ |+ + ||||||||+||
T Consensus 4 ~~~~~~~s~~~l---i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~al------d~-----~--gpL~GvPi~vK 67 (476)
T 2gi3_A 4 DLDFRKLTIEEC---LKLSEEEREKLPQLSLETIKRLDPHVKAFISVRENVSV------EK-----K--GKFWGIPVAIK 67 (476)
T ss_dssp CSCGGGCCHHHH---TTSCHHHHTTHHHHHHHHHHHHHHHHCCEEEECCCCCC------CC-----C--STTTTCEEEEE
T ss_pred ccccccCCHHHH---HHcCCCCHHHHHHHHHHHHHHhCCceeEEEecChhhhh------hc-----c--CCcCCceEEEE
Confidence 456777899999 99999999999999999999999999999999 77777 32 2 89999999999
Q ss_pred cCccCCCCcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHH
Q 009064 123 DNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGGSA 202 (545)
Q Consensus 123 D~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~Gsa 202 (545)
|+|+|+|++||+||..+.++++.+|+++|+|||+||||++||||||||+++.+++|++||+|+||||+.|+|||||||||
T Consensus 68 D~~~v~G~~Tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsA 147 (476)
T 2gi3_A 68 DNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPTRNPWDLERVPGGSSGGSA 147 (476)
T ss_dssp TTBCCSSSCCCTTCGGGTTCCCCSCCHHHHHHHHHTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHH
T ss_pred cCccCCCCccCccChhhcCCCCCCChHHHHHHHHCCCEEEEecCchhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhCCCCCCCC
Q 009064 203 AAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISGHDRLDAT 282 (545)
Q Consensus 203 aaVaag~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g~d~~d~~ 282 (545)
||||+|++++|+|||||||||+|||||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|+|.|+.|+.
T Consensus 148 aAVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~p~~~sld~~Gp~arsv~D~a~~l~~l~g~d~~d~~ 227 (476)
T 2gi3_A 148 AAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGRDENDAT 227 (476)
T ss_dssp HHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEECCTTSBCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHBSCBTTBTT
T ss_pred HHHHcCCCceEeecCCCchhhhhHHHcCCeEEeCCCCcCCCCCCCCcccCCCeeeeeeCCHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred cCCCCCcchHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccchhHHHHHH
Q 009064 283 SSKQEVPDFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFSLGLPAYYIL 362 (545)
Q Consensus 283 s~~~~~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~~~~~~~~~l 362 (545)
+.+.+. .|...+ ..+++++||||+.++++..++++++++++++++.|+++|++|+++++|.+.+....++.+
T Consensus 228 ~~~~p~-~~~~~~-------~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~p~~~~~~~~~~~~ 299 (476)
T 2gi3_A 228 TVNRKV-DFLSEI-------EEGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSVATYYVI 299 (476)
T ss_dssp CCSCCC-CSSTTT-------TSCCTTCEEEEEGGGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEECCTTGGGHHHHHHHH
T ss_pred ccCCCc-chhhhh-------hcCCCCCEEEEECccccCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchHHHHHHHHHH
Confidence 665443 443333 345788999999987666899999999999999999999999999999877777778888
Q ss_pred HHHhhhhcccccccccccCcchhhhHHHHHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhh
Q 009064 363 ASSESSSNLSRYDGVRYGNQAAAEDLNALYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQKSFKTAL 442 (545)
Q Consensus 363 ~~~e~~~~l~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~ 442 (545)
+..|...++.+|++..++.+...+++.+++...+.+.+.+.++.++..+.......+...+|.++++.|+.++++|+++|
T Consensus 300 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~ 379 (476)
T 2gi3_A 300 APAEASSNLARFDGVKYGLRIKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAAYYEAYFNKAMKVRRKISDELNEVL 379 (476)
T ss_dssp HHHHHHTC------------------------CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccccccHHHHHHhhhhhhcCHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999988887665543101233344443344557788888887775544333344578899999999999999999
Q ss_pred ccCCEEEecCCCCCccccCcccCCcccccccccccccccccCCCeEEecCcccCCCCCCCCeEEEEEcCCCCHHHHHHHH
Q 009064 443 DENDILISPAAPSAAYKIGEKKNDPLAMYSGDIMTVNVNLAGLPALVLPCGFVEGGPIGLPVGLQMIGAAFDEGKLLKVG 522 (545)
Q Consensus 443 ~~~DvLl~Pt~p~~a~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~~~~~~~GlPvGvQlvg~~~~D~~LL~~a 522 (545)
+++|+||+|++|.+||++++ ..++...+....||.+||++|+|+++||+|+. +|||+||||||++|+|+.||++|
T Consensus 380 ~~~D~ll~Pt~~~~a~~~~~-~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~----~GlPvGvqlvg~~~~d~~lL~~A 454 (476)
T 2gi3_A 380 SQYDAILTPTSPVTAFKIGE-IKDPLTYYLMDIFTIPANLAGLPAISVPFGFS----NNLPVGVQVIGRRFADGKVFRIA 454 (476)
T ss_dssp HHSSEEEEESCSSCCCBTTT-CCCHHHHHTTTTTTHHHHHHTCCEEEEEEEEE----TTEEEEEEEECCTTCHHHHHHHH
T ss_pred hcCCEEEeCCCCCCCCcccc-cccchhhhhccceeccccccCCceEEEecccC----CCCCeEEEEEcCCCCHHHHHHHH
Confidence 99999999999999999987 33443334444689999999999999999997 59999999999999999999999
Q ss_pred HHHHHHcCCCCC
Q 009064 523 HIFEQTLQGCRF 534 (545)
Q Consensus 523 ~~lE~~~~~~~~ 534 (545)
++||++++|+++
T Consensus 455 ~~lE~~~~~~~~ 466 (476)
T 2gi3_A 455 RAIEKNSPYNEN 466 (476)
T ss_dssp HHHHHHCTTSBT
T ss_pred HHHHHhcCcccc
Confidence 999999998743
No 5
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-103 Score=824.78 Aligned_cols=426 Identities=31% Similarity=0.460 Sum_probs=382.3
Q ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHHHcCCCCCCccccEEEeecCccCC
Q 009064 50 SQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTV 128 (545)
Q Consensus 50 ~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vKD~~~v~ 128 (545)
+|+.+|+++|++|++|++||+++||+||+++|+ +|||+++ .|+|+++|+++|+++++|+.+||||||||+|||+|+|+
T Consensus 1 ~~~~~l~~~~~~g~~s~~el~~a~l~ri~~~~~-lna~~~~~~~~Al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~ 79 (434)
T 2dc0_A 1 MDLLEAKRLLETGRTTPLALLEEALERAKAFQD-RNALAYLDEEAARKEALALTEELRRGQVRGPLHGLPLTVKDLFPVK 79 (434)
T ss_dssp CCHHHHHHHHHTTSCCHHHHHHHHHHHHHHTGG-GCCEEEECHHHHHHHHHHHHHHHHTTCCCSTTTTCEEEEETTSCBT
T ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-CcEEEEcCHHHHHHHHHHHHHHHhcCCCCCCcCCeeEEEEeccccC
Confidence 489999999999999999999999999999999 9999999 88999999999999999999999999999999999999
Q ss_pred CCcCCcccccccCCCC-CCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 009064 129 DMPSTAGSRVLENYRP-PFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGGSAAAVSA 207 (545)
Q Consensus 129 g~~tt~Gs~~~~~~~~-~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~GsaaaVaa 207 (545)
|++||+||..+ +++ .+|+++|+|||+||||++||||||||+++.+++|++||+|+||||+.|+|||||||||++||+
T Consensus 80 G~~tt~Gs~~~--~~~a~~dA~vV~rL~~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAa 157 (434)
T 2dc0_A 80 GMPTRAGTKAP--LPPLPEEARAVRRLREAGALLFAKTNMHEIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVAL 157 (434)
T ss_dssp TBCCCTTCSSC--CCCCCSSCHHHHHHHHTTCEEEEEECCSGGGCCSSCCCTTTCCCBCSSCTTBBCCSSSHHHHHHHHH
T ss_pred CcccCCCCccc--CCCCCCCHHHHHHHHHCCCEEEEEeChhHHhcCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHc
Confidence 99999999999 666 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhCCCCCCCCcCCCC
Q 009064 208 RQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISGHDRLDATSSKQE 287 (545)
Q Consensus 208 g~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g~d~~d~~s~~~~ 287 (545)
|++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|+ +.|+.
T Consensus 158 g~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~g~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~-~~d~~----- 231 (434)
T 2dc0_A 158 GIGLASLGTDTGGSIRIPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAHFLTEILAGE-SIPLE----- 231 (434)
T ss_dssp TSSSCEEEECSSSTTHHHHHHHTCEEEECSTTSSCCTTSCCSCTTTCCEEEEESSHHHHHHHHHHHHTS-CCCCC-----
T ss_pred CCCceeeecCCChhhhhhHHhCCCEEEECCCCCCCCCCCCCCCCccCeeCcccCCHHHHHHHHHHHhCC-CCCcc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 55531
Q ss_pred CcchHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccchhHHHHHHHHHhh
Q 009064 288 VPDFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFSLGLPAYYILASSES 367 (545)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~~~~~~~~~l~~~e~ 367 (545)
+++++||||+.++++..++|+++++++++++.|+++|++|+++++| +.+....++.++..|.
T Consensus 232 -----------------~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~p-~~~~~~~~~~~~~~e~ 293 (434)
T 2dc0_A 232 -----------------GVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP-LEGVYEVYTRLVRYEA 293 (434)
T ss_dssp -----------------CCCSCEEEECHHHHTTCSCHHHHHHHHHHHHHTTTTTCEEEECCCC-CTTHHHHHHHHHHHHH
T ss_pred -----------------cccCCEEEEECccccCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCC-cHHHHHHHHHHHHHHH
Confidence 3467999999887667889999999999999999999999999998 7777777777777777
Q ss_pred hhcccccccccccCcchhhhHHHHHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhhccCCE
Q 009064 368 SSNLSRYDGVRYGNQAAAEDLNALYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQKSFKTALDENDI 447 (545)
Q Consensus 368 ~~~l~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~~~~Dv 447 (545)
..++.. ++. .+.+.+.+.++.++..+. ..+..+|.++++.|+.++++|.++|+++|+
T Consensus 294 ~~~~~~-----------------~~~-~~~~~~~~~~~~~~~~g~-----~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ 350 (434)
T 2dc0_A 294 ARIHEK-----------------ALK-EHPEGFSPQVREALLAGL-----ALTEKDYRDAVAEREALRLELVKALRGVDA 350 (434)
T ss_dssp HHHSHH-----------------HHH-HCGGGSCHHHHHHHHHHH-----HSCHHHHHHHHHHHHHHHHHHHHHHTTSSE
T ss_pred HHHHHH-----------------HHH-hchhhcCHHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 553321 121 123357888888887663 235578999999999999999999999999
Q ss_pred EEecCCCCCccccCcccC----Cccccccc-ccccccccccCCCeEEecCcccCCCCCCCCeEEEEEcCCCCHHHHHHHH
Q 009064 448 LISPAAPSAAYKIGEKKN----DPLAMYSG-DIMTVNVNLAGLPALVLPCGFVEGGPIGLPVGLQMIGAAFDEGKLLKVG 522 (545)
Q Consensus 448 Ll~Pt~p~~a~~~~~~~~----~~~~~~~~-~~~t~~~N~~G~PaisvP~g~~~~~~~GlPvGvQlvg~~~~D~~LL~~a 522 (545)
||+|++|.++|++++... .....+.. ..||.+||++|+|+++||+|+ . +|||+||||||++|+|+.||++|
T Consensus 351 ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~---~GlPvGvqlvg~~~~d~~lL~~A 426 (434)
T 2dc0_A 351 LLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLGVPTLALPFAK-V---EGMPVGLQVVGAYGEDGKVLALG 426 (434)
T ss_dssp EEEESCSSSCCBTTCCEEEETTEEEEHHHHHHTTTHHHHHTTCCEEEEEEEE-E---TTEEEEEEEECCTTCHHHHHHHH
T ss_pred EEECCCCCCCccCcccccccccchhhhhhhhhhhhhhhhhhCCCeEEEecCC-C---CCCCeEEEEECCCCchHHHHHHH
Confidence 999999999999986421 00111112 358999999999999999999 5 79999999999999999999999
Q ss_pred HHHHHHc
Q 009064 523 HIFEQTL 529 (545)
Q Consensus 523 ~~lE~~~ 529 (545)
++||+++
T Consensus 427 ~~lE~~~ 433 (434)
T 2dc0_A 427 GWLEARL 433 (434)
T ss_dssp HHHHTTC
T ss_pred HHHHHhh
Confidence 9999875
No 6
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A
Probab=100.00 E-value=5.3e-103 Score=834.25 Aligned_cols=455 Identities=27% Similarity=0.365 Sum_probs=397.6
Q ss_pred CCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHHHcCCCCCCccccEEEeec
Q 009064 45 TSPPESQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKD 123 (545)
Q Consensus 45 ~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vKD 123 (545)
.++.. ++.+|+++|++|++|++||+++||+||+++|+.+|||+++ .|+|+++|++ | .||||||||+|||
T Consensus 4 ~~~~~-~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~-d--------~gpL~GvPi~vKD 73 (493)
T 3a2q_A 4 VDLWQ-DATAQAELVRSGEISRTELLEATIAHVQAVNPEINAVIIPLFEKARRESEL-A--------SGPFAGVPYLLKD 73 (493)
T ss_dssp CCTTS-CHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHH-C--------CSTTTTCEEEEES
T ss_pred hhhhh-hHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCccCeEEecCHHHHHHHhhh-c--------CCCcCCcEEEEec
Confidence 35667 9999999999999999999999999999999999999999 8889999998 7 3899999999999
Q ss_pred Cc-cCCCCcCCccccccc--CCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhH
Q 009064 124 NI-CTVDMPSTAGSRVLE--NYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGG 200 (545)
Q Consensus 124 ~~-~v~g~~tt~Gs~~~~--~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~G 200 (545)
+| +|+|++||+||..+. ++++.+|+++|+|||+||||++||||||||+++.+++|+.||+|+||||+.|+|||||||
T Consensus 74 ~~~~v~G~~Tt~Gs~~~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgG 153 (493)
T 3a2q_A 74 LTVVSQGDINTSSIKGMKESGYRADHDAYFVQRMRAAGFVLLGKTNTPEMGNQVTTEPEAWGATRNPWNLGRSVGGSSGG 153 (493)
T ss_dssp SSSCCTTSBCCTTCHHHHHHTCBCSSCCHHHHHHHHHTCEEEEEECCSGGGCSSSCCCTTTCCCCBTTBTTBCCCSSSHH
T ss_pred CCcCcCCCcccccChhhhhcCCCCCCCHHHHHHHHHCCCceEEEcChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcCcHH
Confidence 99 999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCcccccccCCCcccccccccCcceecCCCCcccCCCC--c-ccCCCCceeccccCcHHHHHHHHHHHhCCC
Q 009064 201 SAAAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGL--I-AYASSLDVIGCFGSSVADTGILLSAISGHD 277 (545)
Q Consensus 201 saaaVaag~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~--~-~~~~~~d~~Gpmarsv~Dla~ll~vl~g~d 277 (545)
|||+||+|++++|+|||||||||+|||||||||||||+|+||+.|+ . +++.++|++|||||||+|+++++++|+|+|
T Consensus 154 sAAAVAaG~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~g~~~~~~~~~sld~~Gp~arsv~D~a~~l~~l~g~d 233 (493)
T 3a2q_A 154 SGAAVAAALSPVAHGNDAAGAVRIPASVCGVVGLKPTRGRISPGPLVTDSDNVAGAAHEGLFARSVRDIAALLDVVSGHR 233 (493)
T ss_dssp HHHHHHTTSCSEEEEEESSSTTHHHHHHHTSEEEECSTTSBCCCSSCCHHHHHHTTCEEEEEESSHHHHHHHHHHHBSCC
T ss_pred HHHHHHcCCCceeeecCCCcccccchhhcCcceEEcCCCccCCCCCcccccccccCceecCccCCHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999998 5 888899999999999999999999999999
Q ss_pred CCCCCcCCCCCcchHHHHHHhhhhcCCCCCCcEEEEecccC--CCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCcc--
Q 009064 278 RLDATSSKQEVPDFTSQLISAALLESKPLKGLKVGVIRETL--ENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFS-- 353 (545)
Q Consensus 278 ~~d~~s~~~~~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~--~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~-- 353 (545)
+.|+.+.+.+...|...+ ..+.+++||||+.+++ ...++++++++++++++.|+++|++|+++++|.+.
T Consensus 234 ~~d~~~~~~p~~~~~~~~-------~~~~~~lrIgv~~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~ 306 (493)
T 3a2q_A 234 PGDTFCAPTASRPYAQGI-------SENPGSLRVGVLTHNPVGDFALDPECAAAARGAAAALAALGHDVNDAYPEALGDR 306 (493)
T ss_dssp TTCSCCCCCCSSCHHHHT-------TSCCCSCEEEECCSCTTCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCCGGGGCC
T ss_pred CCCcccccCCCcchhhhc-------ccCCCCCEEEEECCccccCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCccCHH
Confidence 999877655544565544 4457899999999876 46789999999999999999999999999987443
Q ss_pred chhHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHh-hhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHH
Q 009064 354 LGLPAYYILASSESSSNLSRYDGVRYGNQAAAEDLNALYG-DSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRT 432 (545)
Q Consensus 354 ~~~~~~~~l~~~e~~~~l~~~~~~~~g~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~r~ 432 (545)
+....++.++..|...++..+ .+.+. ......+.+.++.++..+. .++..+|.++++.|+
T Consensus 307 ~~~~~~~~~~~~e~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~a~~~r~ 367 (493)
T 3a2q_A 307 SFLKDYSTICDVAIAREIERN--------------GELIGRPLTEDDVEWTSWEMVKRAD-----QVTGRAFAACVDELR 367 (493)
T ss_dssp THHHHHHHHHHHHHHHHHHHH--------------HHHHTSCCCTTTSCHHHHHHHHHHH-----TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------------HHHhcCccChhhcCHHHHHHHHhhc-----cCCHHHHHHHHHHHH
Confidence 455667777777775533221 11121 1122347788888776653 445678999999999
Q ss_pred HHHHHHHHhh-ccCCEEEecCCCCCccccCcccCC-c----------ccccc-cccccccccccCCCeEEecCcccCCCC
Q 009064 433 LIQKSFKTAL-DENDILISPAAPSAAYKIGEKKND-P----------LAMYS-GDIMTVNVNLAGLPALVLPCGFVEGGP 499 (545)
Q Consensus 433 ~~~~~~~~~~-~~~DvLl~Pt~p~~a~~~~~~~~~-~----------~~~~~-~~~~t~~~N~~G~PaisvP~g~~~~~~ 499 (545)
.++++|.++| +++|+||+|++|.+||++++...+ + ...+. ...||.+||++|+|+++||+|+..
T Consensus 368 ~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~--- 444 (493)
T 3a2q_A 368 YYAGKVERWWEAGWDLLILPTVTRQTPEIGELMLAKGTDLEGRQSAFISGSLQMLAFTVPFNVSGQPAISLPIGMSS--- 444 (493)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCSSCCCBTTTTCCCTTCCCCSSCGGGSHHHHHHHTTTTHHHHHCCCEEEEEEEECT---
T ss_pred HHHHHHHHHHhcCCCEEEcCCCCCCCCCCcccccccccccccccchhhhhhhhhhcccccccccCCCceeccCCcCC---
Confidence 9999999999 999999999999999999864321 1 01111 134899999999999999999987
Q ss_pred CCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCcc
Q 009064 500 IGLPVGLQMIGAAFDEGKLLKVGHIFEQTLQGCRFVPPL 538 (545)
Q Consensus 500 ~GlPvGvQlvg~~~~D~~LL~~a~~lE~~~~~~~~~P~~ 538 (545)
+|||+||||||++|+|+.||++|++||+.++|+++.|++
T Consensus 445 ~GlPvGvQlvg~~~~d~~lL~~A~~lE~~~~~~~~~p~~ 483 (493)
T 3a2q_A 445 DGMPIGVQIVAAYGREDLLLQVAAQLEGALPWVARRPQL 483 (493)
T ss_dssp TSCEEEEEEEESTTCHHHHHHHHHHHHHHSCCTTCCCGG
T ss_pred CCCCeEEEEecCCCChHHHHHHHHHHHHhcCcccCCCCC
Confidence 899999999999999999999999999999987777775
No 7
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A*
Probab=100.00 E-value=9.7e-103 Score=833.41 Aligned_cols=465 Identities=32% Similarity=0.481 Sum_probs=398.1
Q ss_pred CCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhC---CCccEEEec-CHHHHHHHHhhhHHHHcCCCCCCccccEEE
Q 009064 45 TSPPESQILSIRHSLLSREVTATQLAETYLSRLKLAE---PQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVG 120 (545)
Q Consensus 45 ~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~---~~~na~~~~-~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~ 120 (545)
+++..+|+.+|+++|++|++|++||+++||+||+++| +.+|||+++ .+ |+++|+++|+++++|+..||||||||+
T Consensus 6 ~~~~~~~~~~l~~~l~~g~~s~~el~~a~l~ri~~~~~~~~~lna~~~~~~~-Al~~A~~~d~~~~~g~~~gpL~GvPi~ 84 (503)
T 1m22_A 6 FPYAETDVADLQARMTAGELDSTTLTQAYLQRIAALDRTGPRLRAVIELNPD-ALKEAAERDRERRDGRLRGPLHGIPLL 84 (503)
T ss_dssp CTTTTCCHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTTSTTCCCCEEEECTT-HHHHHHHHHHHHHTTCCCSTTTTCEEE
T ss_pred CCcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCCCceEEEEECCHH-HHHHHHHHHHHHHcCCCCCCcCCceeE
Confidence 4677889999999999999999999999999999999 899999999 66 999999999999999999999999999
Q ss_pred eecCccCCCCcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCccccccc-----CCCCCCCCCCCCCCCCCCCCCCC
Q 009064 121 VKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGM-----GSTTESSSFQVTANPWDISRVPG 195 (545)
Q Consensus 121 vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~-----~~~~~n~~~G~t~NP~~~~~~~G 195 (545)
|||+|+|+|++||+||..+.++++ +|+++|+|||+||||++||||||||++ +.+++|++||+|+||||+.|+||
T Consensus 85 vKD~~~v~G~~Tt~Gs~~~~~~~~-~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~~~~~~n~~~G~t~NP~~~~~~pG 163 (503)
T 1m22_A 85 LKDNINAAPMATSAGSLALQGFRP-DDAYLVRRLRDAGAVVLGKTNLSEWANFRGNDSISGWSARGGQTRNPYRISHSPC 163 (503)
T ss_dssp EETTBCCTTSCCCTTCGGGTTCCC-CCCHHHHHHHHTTCEEEEEECCSHHHHCSCTTCCTTEETTTEECCCTTSTTBCCC
T ss_pred eecccccCCCCcCCCCHhhcCCCC-CCcHHHHHHHHCCCEEEeccCHHHHhcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999 999999999999999999999999998 77899999999999999999999
Q ss_pred CChhHHHHHHHhCCCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhC
Q 009064 196 GSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISG 275 (545)
Q Consensus 196 GSS~GsaaaVaag~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g 275 (545)
|||||||||||+|++++|+|||||||||+|||||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|+|
T Consensus 164 GSSgGsAaAVAag~~~~alGtDtgGSIRiPAa~cGvvGlKPT~Grvs~~G~~p~~~sld~~Gp~arsv~D~a~~l~vl~g 243 (503)
T 1m22_A 164 GSSSGSAVAVAANLASVAIGTETDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAG 243 (503)
T ss_dssp SSSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHTTSEEEECCTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHHcCCCceeeecCCCchhhhhHHHhCceEEECCCCCcCCCCcCCccCCCCeeCcccCCHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCC---CcchHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCc
Q 009064 276 HDRLDATSSKQE---VPDFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSF 352 (545)
Q Consensus 276 ~d~~d~~s~~~~---~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~ 352 (545)
.|+.|+.+...+ .++|...+ ....++++||||+.+++ .+++++.++++++++.|+++|++|+++++|.+
T Consensus 244 ~d~~d~~~~~~~~~~~~~~~~~~------~~~~~~~lrIgv~~~~~--~~~~~v~~a~~~a~~~L~~~G~~v~~~~~p~~ 315 (503)
T 1m22_A 244 RDDADPATATMPGRAVYDYTARL------DPQGLRGKRIGLLQTPL--LKYRGMPPLIEQAATELRRAGAVVVPVELPNQ 315 (503)
T ss_dssp CCTTCGGGGGCTTCCCCCGGGGC------CTTTTTTCEEEEECSGG--GGSTTHHHHHHHHHHHHHHTTCEEEEECCTTT
T ss_pred CCCCCccccccccccccchhhhc------cccCCCCCEEEEECccc--cCCHHHHHHHHHHHHHHHHcCCEEEEeCCCcH
Confidence 999998765443 23454333 12357899999998775 38999999999999999999999999999877
Q ss_pred cchhHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHhhh------hccCCCHHHHHHHHhhhhhhhcCCCHHHHHH
Q 009064 353 SLGLPAYYILASSESSSNLSRYDGVRYGNQAAAEDLNALYGDS------RAKGFGSEVKMRILMGTYALSAGYYDAYYKR 426 (545)
Q Consensus 353 ~~~~~~~~~l~~~e~~~~l~~~~~~~~g~~~~~~~l~~~~~~~------~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~ 426 (545)
.+....++.++..|+..++..|+.... .. ...+.+++... ....++++++.++..+ ..++..+|.+
T Consensus 316 ~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 387 (503)
T 1m22_A 316 GAWAEAERTLLLYEFKAGLERYFNTHR-AP--LRSLADLIAFNQAHSKQELGLFGQELLVEADAT-----AGLADPAYIR 387 (503)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTT-CS--CCSHHHHHHHHHHTHHHHSSSSCCHHHHHHHTC-----CCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-cc--cccHHHHHHHhhhcchhcccccCHHHHHHHHhc-----CCCCHHHHHH
Confidence 655556677778888877777765321 00 12233332211 1235777887777654 2344567888
Q ss_pred HHHHHHHHHHH--HHHhhcc--CCEEEecCCCCCccccCcccCCcccccccccccccccccCCCeEEecCcccCCCCCCC
Q 009064 427 AQQVRTLIQKS--FKTALDE--NDILISPAAPSAAYKIGEKKNDPLAMYSGDIMTVNVNLAGLPALVLPCGFVEGGPIGL 502 (545)
Q Consensus 427 a~~~r~~~~~~--~~~~~~~--~DvLl~Pt~p~~a~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~~~~~~~Gl 502 (545)
+++.|+.++++ |.++|++ +|+||+|++ .++++++.. .+.. . ..||.+||++|+|+++||+|+. +||
T Consensus 388 a~~~~~~~~~~~~~~~~~~~~~~D~ll~Pt~-~~a~~~~~~-~~~~---~-~~~t~~~nl~G~PaisvP~g~~----~Gl 457 (503)
T 1m22_A 388 ARSDARRLAGPEGIDAALAAHQLDALVAPTT-GVAWPIRSE-GDDF---P-GESYSAAAVAGYPSLTVPMGQI----DGL 457 (503)
T ss_dssp HHHHHHHHHTTTTHHHHHHHTTCSEEEEECC-CCCCBTTC----CC---T-TCCHHHHHHHTCCEEEEEEEEE----TTE
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCEEEeCCC-ccCcccccc-cCcc---c-ccccccchhhCCCeEEeccccC----CCC
Confidence 88887777765 9999974 999999999 567776531 1111 1 3589999999999999999988 599
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCcc
Q 009064 503 PVGLQMIGAAFDEGKLLKVGHIFEQTLQGCRFVPPL 538 (545)
Q Consensus 503 PvGvQlvg~~~~D~~LL~~a~~lE~~~~~~~~~P~~ 538 (545)
|+||||||++|+|+.||++|++||++++|+ +.|.+
T Consensus 458 PvGvqlvg~~~~d~~lL~~A~~~E~~~~~~-~~p~~ 492 (503)
T 1m22_A 458 PVGLLFMGTAWSEPKLIEMAYAYEQRTRAR-RPPHF 492 (503)
T ss_dssp EEEEEEECSTTCHHHHHHHHHHHHHHHCCC-CCCCC
T ss_pred CeEEEEECCCCChHHHHHHHHHHHHhhCCC-CCCCC
Confidence 999999999999999999999999999984 44544
No 8
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A
Probab=100.00 E-value=6.7e-101 Score=819.10 Aligned_cols=483 Identities=28% Similarity=0.441 Sum_probs=399.6
Q ss_pred cCCHHHHHHHHHcCCCCH-HHHHHHHHHHHHhhCCCccEEE-ec-CHHHHHHHHhhhHH---------HHcCCCCCCccc
Q 009064 49 ESQILSIRHSLLSREVTA-TQLAETYLSRLKLAEPQLKSFI-HV-SNNVLKEAQSIDDK---------IKRNENVGPLAG 116 (545)
Q Consensus 49 ~~s~~~l~~~~~~~~~t~-~ev~~~~l~ri~~~~~~~na~~-~~-~~~a~~~A~~~d~~---------~~~g~~~gpL~G 116 (545)
..++.++...|.+++++. +|+++.++++++++++.+|+++ .+ .+++ .++.+.|+. ..+|+..|||||
T Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~g~~~gpL~G 90 (521)
T 3a1k_A 12 DAAARHYGITLDKTARLEWPALIDGALGSYDVVDQLYADEATPPTTSRE-HAVPSASENPLSAWYVTTSIPPTSDGVLTG 90 (521)
T ss_dssp HHHHHHTTCCCCTTHHHHHHHHHHHHTHHHHHHHHHHHHHSCCCCCCCC-EECCCTTTCTTSCEEEEEEECCSSCCTTTT
T ss_pred HHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHhhhcccccccCchhh-hhccccccchhhhhHHHHhhcCCCCCCCCC
Confidence 457888888999999999 9999999999999988776666 66 6666 666666652 224777899999
Q ss_pred cEEEeecCccCCCCcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 009064 117 VLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGG 196 (545)
Q Consensus 117 iPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GG 196 (545)
|||+|||||+|+|++||+||..+.++++.+|+++|+|||+||||++|||||+||+++.+++|+.||+|+||||+.|+|||
T Consensus 91 vPi~vKD~i~v~G~~Tt~Gs~~~~~~~~~~DA~vV~rLr~AGAvilGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGG 170 (521)
T 3a1k_A 91 RRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDLCFSGSSFTPASGPVRNPWDRQREAGG 170 (521)
T ss_dssp CEEEEETTBCCTTSCBCTTCTTTTTBCCSSCCHHHHHHHHTTCEEEEEECCCGGGCCSSSSCCTTCCCEETTEEEEECCS
T ss_pred CEEEEEcCcccCCcccCCCChhhcCCCCCCchHHHHHHHHCCCEEEEeeChhhHhhCCCCCCCCCCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHhCCCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhCC
Q 009064 197 SSGGSAAAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISGH 276 (545)
Q Consensus 197 SS~GsaaaVaag~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g~ 276 (545)
||||||||||+|++++|||||||||||+|||||||||||||+|+||++|++|+++++|++|||||||+|+++++++|+|+
T Consensus 171 SSgGSAAAVAag~~~~alGtDtgGSIR~PAa~cGvvGlKPT~Grvs~~G~~p~~~sld~~Gp~aRsv~D~a~~l~vlag~ 250 (521)
T 3a1k_A 171 SSGGSAALVANGDVDFAIGGDQGGSIRIPAAFCGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAGR 250 (521)
T ss_dssp SSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEECSTTTSCCTTBCCSCGGGCEEEEEESSHHHHHHHHHHHCSC
T ss_pred CCchHHHHHhcCCcceecccCCCCCCCcChHHcCCeeEecCCCcCCCCCCCCcccccCeeCceeCcHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcC-CCCCcchHHHHHHhhhhcCCCCCCcEEEEecccCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccc
Q 009064 277 DRLDATSS-KQEVPDFTSQLISAALLESKPLKGLKVGVIRETLE-NGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFSL 354 (545)
Q Consensus 277 d~~d~~s~-~~~~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~-~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~~ 354 (545)
|+.|+.+. ..+.++|...+ ..+++++||||+.+.+. ..++++++++++++++.|+++|++|+++++|.+.+
T Consensus 251 d~~D~~~~~~~~~~~~~~~l-------~~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~Ga~v~ev~~p~~~~ 323 (521)
T 3a1k_A 251 DGNDPRQADSVEAGDYLSTL-------DSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAAHSLTEIGCTVEEVNIPWHLH 323 (521)
T ss_dssp CSSCTTSCTTCCCCCSSTTT-------TSCCTTCEEEEEGGGSCCSSSCHHHHHHHHHHHHGGGGGTCEEEEECCTHHHH
T ss_pred CCCCccccccCCCcchhhhh-------ccCccCcEEEEECccccccCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchHh
Confidence 99887762 23444565444 44678999999987653 46899999999999999999999999999987665
Q ss_pred hhHHHHHHHHHhhhhcccccccccccCcch-hhhHHH---HHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHH
Q 009064 355 GLPAYYILASSESSSNLSRYDGVRYGNQAA-AEDLNA---LYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQV 430 (545)
Q Consensus 355 ~~~~~~~l~~~e~~~~l~~~~~~~~g~~~~-~~~l~~---~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~ 430 (545)
....++.+...+...++.++++..+..+.. ..++.+ .+...+.+.+.++++.++..|.+. ...+...+|.++++.
T Consensus 324 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~-~~~~~~~~~~~a~~~ 402 (521)
T 3a1k_A 324 AFHIWNVIATDGGAYQMLDGNGYGMNAEGLYDPELMAHFASRRIQHADALSETVKLVALTGHHG-ITTLGGASYGKARNL 402 (521)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTTTCSSSCSCCCHHHHHHHHHHHHHSGGGSCHHHHHHHHHHHHH-HTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccccccchhhhhhHHHHHHHHHHhhhhhhhcCHHHHHHHHhchhh-hccCCHHHHHHHHHH
Confidence 556666666666666776666542211110 112222 223334456899999999887653 244566789999999
Q ss_pred HHHHHHHHHHhhccCCEEEecCCCCCccccCcccCCccc----ccccccccccccccCCCeEEecCcccCCCCCCCCeEE
Q 009064 431 RTLIQKSFKTALDENDILISPAAPSAAYKIGEKKNDPLA----MYSGDIMTVNVNLAGLPALVLPCGFVEGGPIGLPVGL 506 (545)
Q Consensus 431 r~~~~~~~~~~~~~~DvLl~Pt~p~~a~~~~~~~~~~~~----~~~~~~~t~~~N~~G~PaisvP~g~~~~~~~GlPvGv 506 (545)
|+.+++.|+++|+++|+||+||+|.+||++++...+... .+....||.+||++|+|+++||+|+. +|||+||
T Consensus 403 r~~~~~~~~~~~~~~Dvll~Pt~p~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~----~GlPvGl 478 (521)
T 3a1k_A 403 VPLARAAYDTALRQFDVLVMPTLPYVASELPAKDVDRATFITKALGMIANTAPFDVTGHPSLSVPAGLV----NGLPVGM 478 (521)
T ss_dssp HHHHHHHHHHHHHHCSEEEEESCSSCCCBCCCTTCCHHHHHHHHHTTCTTTHHHHHHCCCEEEEEEEEE----TTEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCcccccccCchhhHHHHHHhhhcccccchhcCCCcEEeecccC----CCCCeeE
Confidence 999999999999999999999999999999874222110 11123478999999999999999995 6999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHH-HcCCCCCCCccccCCCCC
Q 009064 507 QMIGAAFDEGKLLKVGHIFEQ-TLQGCRFVPPLIADGIPQ 545 (545)
Q Consensus 507 Qlvg~~~~D~~LL~~a~~lE~-~~~~~~~~P~~~~~~~~~ 545 (545)
||||++|+|+.||++|++||+ ..+|++ ++....+..||
T Consensus 479 Qlvg~~~~d~~LL~~A~~~E~~~~~~~~-~~~~~~~~~~~ 517 (521)
T 3a1k_A 479 MITGRHFDDATVLRVGRAFEKLRGAFPT-PAERASNSAPQ 517 (521)
T ss_dssp EEECSTTCHHHHHHHHHHHHHHHCCCCC-TTC--------
T ss_pred EEEcCCCCHHHHHHHHHHHHHhhcccCC-ccccccCCCcc
Confidence 999999999999999999999 666644 44555554444
No 9
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A
Probab=100.00 E-value=2.3e-97 Score=771.97 Aligned_cols=409 Identities=24% Similarity=0.428 Sum_probs=359.3
Q ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHHHcCCCCCCccccEEEeecCccCC
Q 009064 50 SQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTV 128 (545)
Q Consensus 50 ~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vKD~~~v~ 128 (545)
+++.+|+++|++|++|++||+++||+||+++|+.+|||+++ .+++ + +..||||||||+|||+|+|+
T Consensus 2 ~~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~a-~------------~~~gpL~GvPi~vKD~~~v~ 68 (414)
T 1o9p_A 2 ISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSAR-A------------QASGPLRGIAVGIKDIIDTA 68 (414)
T ss_dssp CCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTTCC-C------------CSSSTTTTCEEEEETTBCCS
T ss_pred CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCccccEEEEeCHHHh-c------------ccCCCcCCCEEEEEcccccC
Confidence 58999999999999999999999999999999999999999 7766 2 34589999999999999999
Q ss_pred CCcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHhC
Q 009064 129 DMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGGSAAAVSAR 208 (545)
Q Consensus 129 g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~GsaaaVaag 208 (545)
|++||+||..+.++++.+|+++|+|||+||||++||||||||++ .|+ |+|+||||+.|+|||||||||++||+|
T Consensus 69 G~~tt~Gs~~~~~~~~~~dA~~V~rL~~aGAii~GKTn~~Efa~----~n~--G~t~NP~~~~~~pGGSSgGsAaaVAag 142 (414)
T 1o9p_A 69 NMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFAS----RDP--TATLNPHNTGHSPGGASSGSAAAVGAG 142 (414)
T ss_dssp SSCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCCGGGS----SCC--CSCCBTTBTTBCCCSSSHHHHHHHHTT
T ss_pred CcccCcCCHhhccCCCCCCHHHHHHHHHCCCEEEEecCCchhhc----CCC--CCCCCCCCCCCCCCcchHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999998 455 999999999999999999999999999
Q ss_pred CCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCCCceeccccCcHHHHHHHHHHHhCCCCCCCCcCCCCC
Q 009064 209 QCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASSLDVIGCFGSSVADTGILLSAISGHDRLDATSSKQEV 288 (545)
Q Consensus 209 ~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~~d~~Gpmarsv~Dla~ll~vl~g~d~~d~~s~~~~~ 288 (545)
++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|.+ +.. +
T Consensus 143 ~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~s~d~~Gp~arsv~D~a~~~~~l~g~~--~~~----~- 215 (414)
T 1o9p_A 143 MIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRS--EFS----G- 215 (414)
T ss_dssp SCSEEEEEESSSTTHHHHHHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHHCCG--GGS----S-
T ss_pred CCceEEeeCCchhhhHhHHHhCCeeEECCCCCCCCCCCCCCCCccCeeccccCCHHHHHHHHHHhcCCC--ccc----c-
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 110 0
Q ss_pred cchHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCc-cchhHHHHHHHHHhh
Q 009064 289 PDFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSF-SLGLPAYYILASSES 367 (545)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~-~~~~~~~~~l~~~e~ 367 (545)
..+.+++||||+.++++..++|+++++++++++.|+++|++|+++++|.. ......+..++..|.
T Consensus 216 --------------~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~e~ 281 (414)
T 1o9p_A 216 --------------IVPAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEA 281 (414)
T ss_dssp --------------CCCCSSCEEEECCCGGGCCCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------ccCCCCCEEEEECccccCCCCHHHHHHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHHHHHHHHH
Confidence 22457899999998876789999999999999999999999999998753 333344556666676
Q ss_pred hhcccccccccccCcchhhhHHHHHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhhccCCE
Q 009064 368 SSNLSRYDGVRYGNQAAAEDLNALYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQKSFKTALDENDI 447 (545)
Q Consensus 368 ~~~l~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~~~~Dv 447 (545)
..++.. ++.. ..+.+.+.++.++..+ ...+..+|.++++.|+.++++|+++|+++|+
T Consensus 282 ~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~g-----~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ 338 (414)
T 1o9p_A 282 HRALAW-----------------EFSE-HHDEIAPMLRASLDAT-----VGLTPKEYDEARRIGRRGRRELGEVFEGVDV 338 (414)
T ss_dssp HHHTHH-----------------HHHH-SGGGSCHHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHHHTTTCSE
T ss_pred HHHHHH-----------------HHHh-ChhhcCHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 543322 1222 2234788888887766 3455678999999999999999999999999
Q ss_pred EEecCCCCCccccCcccCCcccccccccccccccccCCCeEEecCcccCCCCCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Q 009064 448 LISPAAPSAAYKIGEKKNDPLAMYSGDIMTVNVNLAGLPALVLPCGFVEGGPIGLPVGLQMIGAAFDEGKLLKVGHIFEQ 527 (545)
Q Consensus 448 Ll~Pt~p~~a~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~~~~~~~GlPvGvQlvg~~~~D~~LL~~a~~lE~ 527 (545)
||+|++|.++|+++..... ...||.+||++|+|+++||+|+.. |||+||||||++|+|+.||++|++||+
T Consensus 339 ll~Pt~~~~a~~~~~~~~~------~~~~t~~~nl~G~PaisvP~g~~~----GlPvGvqlvg~~~~d~~lL~~a~~le~ 408 (414)
T 1o9p_A 339 LLTYSAPGTAPAKALASTG------DPRYNRLWTLMGNPCVNVPVLKVG----GLPIGVQVIARFGNDAHALATAWFLED 408 (414)
T ss_dssp EEEESSSSSCCBGGGCCCC------CGGGTHHHHHHCCCEEEEEEEEET----TEEEEEEEEESTTCHHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCcccccCCc------ccchhhhhHhcCCCeEEeeCCCCC----CCCeEEEEECCCCChHHHHHHHHHHHH
Confidence 9999999999998653111 124899999999999999999874 999999999999999999999999999
Q ss_pred HcCC
Q 009064 528 TLQG 531 (545)
Q Consensus 528 ~~~~ 531 (545)
+++.
T Consensus 409 ~~~g 412 (414)
T 1o9p_A 409 ALAK 412 (414)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 8754
No 10
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A*
Probab=100.00 E-value=8.7e-98 Score=797.57 Aligned_cols=462 Identities=21% Similarity=0.259 Sum_probs=372.6
Q ss_pred CCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCccEEEecCHHHHHHHHhhhHHHHcCCCCCCccccEEEeecC
Q 009064 45 TSPPESQILSIRHSLLSREVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDN 124 (545)
Q Consensus 45 ~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~a~~~A~~~d~~~~~g~~~gpL~GiPi~vKD~ 124 (545)
.++..+++.+|+++|++|++|++||+++||+||+++|+.+|||+++.++++++|+++|+ .||||||||+|||+
T Consensus 66 ~~i~~~~~~~l~~~l~~g~~s~~ev~~a~l~ri~~~~~~~na~~~~~~~a~~~a~~~~~-------~gpL~GvPi~vKD~ 138 (573)
T 3ppm_A 66 EALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPR-------QGLLYGVPVSLKEC 138 (573)
T ss_dssp HHHHHSCHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTTHHHHHHHCCT-------TCTTTTCEEEEETT
T ss_pred hhhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCccCEEEEECHHHHHHHHhhhh-------cCCcCCCeEEEEcc
Confidence 46778999999999999999999999999999999999999999994446777776653 28999999999999
Q ss_pred ccCCCCcCCcccccccCCCCCCChHHHHHHHHCCCeEEEeCcccccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHHHH
Q 009064 125 ICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPGGSSGGSAAA 204 (545)
Q Consensus 125 ~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSS~Gsaaa 204 (545)
|+++|++||+||..+.++++.+|+++|++||+||||++||||||||+++.++.|+.||+|+||||+.++||||||||||+
T Consensus 139 ~~~~G~~tt~Gs~~~~~~~~~~da~vV~~L~~aGAv~~gKTn~pe~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaa 218 (573)
T 3ppm_A 139 FSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPGGSSGGEGAL 218 (573)
T ss_dssp BCCBTCCCCTTCGGGTTCCBSSCCHHHHHHHHTTCEEEEEECCCTTSCSSSCEETTTEECCCTTCTTBCCCSSSHHHHHH
T ss_pred cCCCCCCcCCcChhhcCCCCCcchHHHHHHHHCCCEEEEecCCccccccCCCCCCCCCCcCCCCCCCCCCCCCCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCcccccccCCCcccccccccCcceecCCCCcccCCCCcccCCC----CceeccccCcHHHHHHHHHHHhCCCCC-
Q 009064 205 VSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRYGLIAYASS----LDVIGCFGSSVADTGILLSAISGHDRL- 279 (545)
Q Consensus 205 Vaag~~~~aiGsDtgGSiR~PAa~~Gv~G~kpT~g~v~~~g~~~~~~~----~d~~Gpmarsv~Dla~ll~vl~g~d~~- 279 (545)
||+|++++|+|||||||||+||+||||||||||+||||+.|+++.+++ +|++|||||||+|+++++++|++.|++
T Consensus 219 VAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~~~~~~~~~~~~~~Gp~arsv~D~a~~l~~l~~~d~~~ 298 (573)
T 3ppm_A 219 IGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFT 298 (573)
T ss_dssp HHTTSCSEEEEEESSSTTHHHHHHHTCEEEECCGGGSCCTTBCCSCCSCCSSCCEEEEEESSHHHHHHHHHHHSSHHHHH
T ss_pred HHcCCCcEEEecCCCcchhhhhHHhCeeEEeCCCCcccCCCCCCcccccCcccccccceeCcHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999998765 899999999999999999999998743
Q ss_pred -CCCcCCCCCcchHHHHHHhhhhcCCCCCCcEEEEecccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccchhHH
Q 009064 280 -DATSSKQEVPDFTSQLISAALLESKPLKGLKVGVIRETLENGVDSGVKSTVLGAVSHLEELGCTLSEVSLPSFSLGLPA 358 (545)
Q Consensus 280 -d~~s~~~~~~~~~~~~~~~~~~~~~~l~~lRIGv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~Vve~~~p~~~~~~~~ 358 (545)
|+... +.+ |.... ....+++||||+.++....++|+++++++++++.|+++||+|+++++|.+.+....
T Consensus 299 ~d~~~~--~~~-~~~~~-------~~~~~~lrigv~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~~~~p~~~~~~~~ 368 (573)
T 3ppm_A 299 LDPTVP--PLP-FREEV-------YRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEV 368 (573)
T ss_dssp HCTTSC--CCC-CCHHH-------HTCCCCCEEEECSCCSSSCCCHHHHHHHHHHHHHHHHTTCEEEECCCTTHHHHHHT
T ss_pred cCCCCC--ccc-cchhh-------cccCCCCEEEEEcccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCccHHHHHHH
Confidence 44332 222 32222 24578999999988776788999999999999999999999999999987665443
Q ss_pred HH-HHHHHhhhhcc-cccccccccCcc--h------hhhHHHHHhhhhccCCCHHHHHHHHhhhhhhhcCCCHHHHHHHH
Q 009064 359 YY-ILASSESSSNL-SRYDGVRYGNQA--A------AEDLNALYGDSRAKGFGSEVKMRILMGTYALSAGYYDAYYKRAQ 428 (545)
Q Consensus 359 ~~-~l~~~e~~~~l-~~~~~~~~g~~~--~------~~~l~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~y~~a~ 428 (545)
++ ..+..|....+ ..+.+....... . ...+..++.... ..+.+.+...+..+ ...+..+|++++
T Consensus 369 ~~~~~~~~dg~~~~~~~~~~e~~~p~~~~~~~~~~lp~~l~~~~~~~~-~~~~p~~~~~~~~~-----~~~s~~e~~~~~ 442 (573)
T 3ppm_A 369 LSTGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLL-KPLFPRLAAFLNNM-----RPRSAEKLWKLQ 442 (573)
T ss_dssp HHHHHHTTBTTHHHHGGGTTSCCCGGGTTHHHHHTSCHHHHHHHHHHH-TTTCHHHHHHHHHT-----SBCBHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHhccCcccHHHHHHhhhccchHHHHHHHHHHh-hhcchHHHHHHhhc-----ccccHHHHHHHH
Confidence 32 33333432221 111111000000 0 011111111111 12333332222111 234567888889
Q ss_pred HHHHHHHHHHHHhhc--cCCEEEecCCCCCccccCcccCCcccccccccccccccccCCCeEEecCcccC----------
Q 009064 429 QVRTLIQKSFKTALD--ENDILISPAAPSAAYKIGEKKNDPLAMYSGDIMTVNVNLAGLPALVLPCGFVE---------- 496 (545)
Q Consensus 429 ~~r~~~~~~~~~~~~--~~DvLl~Pt~p~~a~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~~~---------- 496 (545)
..|+.++++|.++|+ ++|+||+|+ +.+|++|+... ..+....||.+||++|||+++||+|++.
T Consensus 443 ~~r~~~r~~~~~~w~~~~lDaLL~Pt-~~pA~~h~~~~----~~~~~~~YT~l~NLLDyPA~vVPvg~v~~~~d~~~~~~ 517 (573)
T 3ppm_A 443 HEIEMYRQSVIAQWKAMNLDVLLTPM-LGPALDLNTPG----RATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELY 517 (573)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEC-CCSCCBTTCGG----GCGGGGHHHHHHHHTTCCEEEEEEEECCHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhcCCCEeeCCC-CCCCcCCcccc----ccccccchhhhhHhhCCCeEEEeccccccccccccccc
Confidence 999999999999996 599999999 56888887521 1222346999999999999999999752
Q ss_pred ----------------CCCCCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Q 009064 497 ----------------GGPIGLPVGLQMIGAAFDEGKLLKVGHIFEQTLQGCRF 534 (545)
Q Consensus 497 ----------------~~~~GlPvGvQlvg~~~~D~~LL~~a~~lE~~~~~~~~ 534 (545)
+.++|+|+||||||++|+|++||++|+.+|++++.+++
T Consensus 518 ~~~~~~~~d~~~~~~~~~~~GlPVgVQiVGrr~~EEklL~~a~~IE~~l~~~~~ 571 (573)
T 3ppm_A 518 KGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQKQ 571 (573)
T ss_dssp CCSSCSHHHHHHHHHTCSCTTCEEEEEEECCTTCHHHHHHHHHHHHHHHCTTSC
T ss_pred ccccchhhhhhhhhhhhccCCCceEEEEeCCCCcHHHHHHHHHHHHHHHhcccC
Confidence 12479999999999999999999999999999998643
No 11
>3shg_B VBHA; ampylation, adenylylation, toxin-antitoxin complex, FIC fold transfer, transferase-protein binding complex; HET: TLA; 1.50A {Bartonella schoenbuchensis R1}
Probab=59.67 E-value=12 Score=26.25 Aligned_cols=29 Identities=14% Similarity=0.334 Sum_probs=25.3
Q ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Q 009064 51 QILSIRHSLLSREVTATQLAETYLSRLKL 79 (545)
Q Consensus 51 s~~~l~~~~~~~~~t~~ev~~~~l~ri~~ 79 (545)
-+.++.+.+-+|++|..++++.|.+|+.+
T Consensus 31 ~~l~~~erwv~GEis~~e~i~~~~~r~~~ 59 (61)
T 3shg_B 31 QVVAQMERVVVGELETSDVIKDLMERIKR 59 (61)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHc
Confidence 35577889999999999999999999974
No 12
>2kvu_A MKL/myocardin-like protein 1; SAP motif, DNA/RNA binding, structural genomics, northeast structural genomics consortium (NESG), PSI-2; NMR {Homo sapiens} PDB: 2kw9_A
Probab=53.18 E-value=14 Score=27.35 Aligned_cols=39 Identities=10% Similarity=0.217 Sum_probs=29.5
Q ss_pred CCCCCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhh
Q 009064 42 PSSTSPPESQILSIRHSLLSREVTATQLAETYLSRLKLA 80 (545)
Q Consensus 42 ~~~~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~ 80 (545)
....++..+++.||.+.++.+.+...-.-...++|++++
T Consensus 21 ~l~~~l~klkVaeLK~eLk~RGL~~sG~KaeLIeRL~~~ 59 (75)
T 2kvu_A 21 ALPANLDDMKVAELKQELKLRSLPVSGTKTELIERLRAY 59 (75)
T ss_dssp SCCTTTTTSCHHHHHHHHHHTTCCCCSCHHHHHHHHHHH
T ss_pred cchHHHHHCcHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 444578899999999999999998854445566666654
No 13
>1zrj_A E1B-55KDA-associated protein 5 isoform C; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=30.22 E-value=27 Score=23.68 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=29.1
Q ss_pred CCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhh
Q 009064 45 TSPPESQILSIRHSLLSREVTATQLAETYLSRLKLA 80 (545)
Q Consensus 45 ~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~ 80 (545)
.++..+++.||.+.++.+.++..-.-...++|++++
T Consensus 8 ~~~~klkV~eLK~eLk~RgL~~~G~Ka~Li~RL~~~ 43 (50)
T 1zrj_A 8 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAA 43 (50)
T ss_dssp CCGGGSCHHHHHHHHHHTTCCCCSCHHHHHHHHHHH
T ss_pred CCHHHCcHHHHHHHHHHcCCCCCCcHHHHHHHHHHH
Confidence 467799999999999999998855555667777765
No 14
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=28.59 E-value=78 Score=31.89 Aligned_cols=65 Identities=12% Similarity=0.021 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHHH-cCCCCCCccccEEEeecCccCCCCcCCcccc
Q 009064 68 QLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIK-RNENVGPLAGVLVGVKDNICTVDMPSTAGSR 137 (545)
Q Consensus 68 ev~~~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~~-~g~~~gpL~GiPi~vKD~~~v~g~~tt~Gs~ 137 (545)
|..+..++.++++ .+++|+.+ -+..+.-|..+-+..+ .|..+ +.-|||=+| || |+.+...|.|+.
T Consensus 91 ~~~~~~~~~l~~~--~Id~Lv~IGGdgS~~~A~~L~~~~~~~g~~i-~vIGiPkTI-DN-Dl~~tD~t~GFd 157 (419)
T 3hno_A 91 REYERLIEVFKAH--DIGYFFYNGGGDSADTCLKVSQLSGTLGYPI-QAIHVPKTV-DN-DLPITDCCPGFG 157 (419)
T ss_dssp HHHHHHHHHHHHT--TEEEEEEEESHHHHHHHHHHHHHHHHTTCCC-EEEEEECCT-TC-CCSSSSSCTTHH
T ss_pred HHHHHHHHHHHHc--CCCEEEEeCCchHHHHHHHHHHHHHHhCCCc-cEEEecccc-cC-CCcCCCCCCCch
Confidence 4555666777765 49999999 9999998888876554 34332 789999999 66 667778787764
No 15
>1h1j_S THO1 protein; SAP domain, DNA binding; NMR {Saccharomyces cerevisiae} SCOP: a.140.2.1 PDB: 2wqg_A
Probab=27.77 E-value=28 Score=23.71 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=27.6
Q ss_pred CCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhh
Q 009064 45 TSPPESQILSIRHSLLSREVTATQLAETYLSRLKLA 80 (545)
Q Consensus 45 ~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~ 80 (545)
.++..+++.||.+.++.+.++..-.=...++|+..+
T Consensus 3 ~~~~kltV~eLK~~Lk~RGL~~~G~KadLieRL~~~ 38 (51)
T 1h1j_S 3 ADYSSLTVVQLKDLLTKRNLSVGGLKNELVQRLIKD 38 (51)
T ss_dssp CSGGGCCHHHHHHHHHHTTCCCCSSHHHHHHHHHHH
T ss_pred chHHHCcHHHHHHHHHHcCCCCCCcHHHHHHHHHHH
Confidence 467789999999999999998754445566666654
No 16
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=23.57 E-value=54 Score=22.68 Aligned_cols=37 Identities=11% Similarity=0.262 Sum_probs=27.2
Q ss_pred CCCCCcCCHHHHHHHHHcCCCCHHHHHHHHHHHHHhh
Q 009064 44 STSPPESQILSIRHSLLSREVTATQLAETYLSRLKLA 80 (545)
Q Consensus 44 ~~~~~~~s~~~l~~~~~~~~~t~~ev~~~~l~ri~~~ 80 (545)
..++..+++.||.+.++.+.+...-.=..+++||+.+
T Consensus 7 ~~~l~klkV~eLK~~L~~rGL~~~G~KaeLieRL~~~ 43 (55)
T 2do1_A 7 GVELHKLKLAELKQECLARGLETKGIKQDLIHRLQAY 43 (55)
T ss_dssp CCCTTTSCHHHHHHHHHHHTCCCCSCHHHHHHHHHHH
T ss_pred ccCHHHCcHHHHHHHHHHcCCCCCCcHHHHHHHHHHH
Confidence 3467899999999999998888744444556666543
No 17
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=21.34 E-value=3.8e+02 Score=24.48 Aligned_cols=20 Identities=5% Similarity=-0.019 Sum_probs=16.4
Q ss_pred HHHHHHHHCCCeEEEeCccc
Q 009064 149 TAVKKVKEFDGIVVGKTNLD 168 (545)
Q Consensus 149 ~~V~~L~~aGai~~gkt~~~ 168 (545)
.+++.|+++||.++|-..+=
T Consensus 160 ~a~~~l~~~Ga~vv~v~vlv 179 (238)
T 3n2l_A 160 ESMELIQANKADLAGVLVAI 179 (238)
T ss_dssp HHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHcCCEEEEEEEEE
Confidence 47899999999999976553
No 18
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=20.65 E-value=1.1e+02 Score=31.51 Aligned_cols=61 Identities=20% Similarity=0.175 Sum_probs=45.1
Q ss_pred HHHHHHHhhCCCccEEEec-CHHHHHHHHhhhHHHH-cCCCCCCccccEEEeecCccCCCCcCCcccc
Q 009064 72 TYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIK-RNENVGPLAGVLVGVKDNICTVDMPSTAGSR 137 (545)
Q Consensus 72 ~~l~ri~~~~~~~na~~~~-~~~a~~~A~~~d~~~~-~g~~~gpL~GiPi~vKD~~~v~g~~tt~Gs~ 137 (545)
...+.++++ .+++++.+ -+..+.-|..+.+.++ .|.. =|.-|||=+| || |+.|...|.|+.
T Consensus 180 ~i~~~l~~~--~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~-i~vVGIPkTI-DN-Dl~gTD~T~GFd 242 (487)
T 2hig_A 180 EMVDTLERL--GVNILFTVGGDGTQRGALVISQEAKRRGVD-ISVFGVPKTI-DN-DLSFSHRTFGFQ 242 (487)
T ss_dssp HHHHHHHHH--TCSEEEEEECHHHHHHHHHHHHHHHHHTCC-CEEEEEECCT-TS-SCCCSSCCTTHH
T ss_pred HHHHHHHHc--CCCEEEEeCCCchHHHHHHHHHHHHHhCCC-ceEEeccccc-cC-CCCCCCCCCCHH
Confidence 445556655 49999999 9999998888876654 4532 3789999999 44 456888888874
Done!