Query 009070
Match_columns 544
No_of_seqs 305 out of 1669
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 20:03:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009070.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009070hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 8.6E-50 1.9E-54 388.2 23.4 269 212-540 19-296 (379)
2 PLN03145 Protein phosphatase 2 100.0 2.8E-48 6E-53 407.3 31.3 262 215-538 65-333 (365)
3 KOG0698 Serine/threonine prote 100.0 2.9E-48 6.3E-53 404.0 29.3 267 213-540 38-309 (330)
4 PF00481 PP2C: Protein phospha 100.0 6.7E-46 1.5E-50 372.6 20.5 247 217-527 2-254 (254)
5 PTZ00224 protein phosphatase 2 100.0 1E-43 2.2E-48 374.2 28.5 244 213-538 20-274 (381)
6 COG0631 PTC1 Serine/threonine 100.0 1.3E-41 2.9E-46 343.3 22.7 248 216-540 9-257 (262)
7 KOG0699 Serine/threonine prote 100.0 9E-41 1.9E-45 334.8 20.2 161 357-536 329-504 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 4.4E-36 9.4E-41 297.7 28.6 253 216-534 2-254 (254)
9 smart00332 PP2Cc Serine/threon 100.0 1.1E-35 2.4E-40 296.0 28.9 249 216-532 7-255 (255)
10 KOG0700 Protein phosphatase 2C 100.0 1E-36 2.2E-41 313.3 18.9 234 262-523 96-379 (390)
11 PRK14559 putative protein seri 100.0 2.2E-35 4.7E-40 327.2 26.2 261 215-542 375-642 (645)
12 KOG1323 Serine/threonine phosp 100.0 5.2E-28 1.1E-32 241.0 21.2 248 262-540 141-492 (493)
13 KOG0618 Serine/threonine phosp 99.9 7.8E-23 1.7E-27 227.0 16.6 246 214-538 521-775 (1081)
14 KOG1379 Serine/threonine prote 99.9 1.2E-20 2.7E-25 188.9 19.4 194 264-533 102-329 (330)
15 PF13672 PP2C_2: Protein phosp 99.8 1.7E-17 3.8E-22 161.5 17.8 190 220-483 3-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.6 1.2E-14 2.6E-19 139.4 20.1 161 264-519 29-192 (193)
17 TIGR02865 spore_II_E stage II 99.4 1.1E-11 2.3E-16 142.5 21.9 201 215-534 552-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.2 2.4E-09 5.2E-14 102.3 22.4 177 264-535 3-193 (193)
19 COG2208 RsbU Serine phosphatas 97.6 0.0053 1.2E-07 65.3 19.3 120 358-535 231-366 (367)
20 PRK10693 response regulator of 33.4 3E+02 0.0066 28.2 9.9 31 360-390 227-259 (303)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-50 Score=388.19 Aligned_cols=269 Identities=38% Similarity=0.588 Sum_probs=231.1
Q ss_pred cccceEEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHH
Q 009070 212 DCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLAL 291 (544)
Q Consensus 212 ~~~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L 291 (544)
....+||.+||||||-+|||++.+..-+ | ++ -.++.||||||||.|++++++|+++|.+.+
T Consensus 19 GNglryg~SSMQGWR~eMEDah~A~~~l---~----------~~------l~dWSfFAVfDGHAGs~va~~c~~hLlehi 79 (379)
T KOG0697|consen 19 GNGLRYGVSSMQGWRVEMEDAHTAVAGL---P----------SP------LEDWSFFAVFDGHAGSQVANHCAEHLLEHI 79 (379)
T ss_pred CCceeeeeccccchhhhhhhhhhhhhcC---C----------CC------ccCceEEEEEcCccchHHHHHHHHHHHHHh
Confidence 3457899999999999999999876432 1 11 238999999999999999999999999998
Q ss_pred HHHHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCe
Q 009070 292 AEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSH 371 (544)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~ 371 (544)
...-.+.... .....+.+++-|+..|+++|+.+..... ......++||||+.+++...+
T Consensus 80 ~sse~F~~~~------k~gsv~~~~~GIrtGFL~iDE~mr~~~~---------------~~~~~drsGsTAVcv~vsp~h 138 (379)
T KOG0697|consen 80 ISSEEFRGMT------KNGSVENVEKGIRTGFLSIDEIMRTLSD---------------ISKGSDRSGSTAVCVFVSPTH 138 (379)
T ss_pred hhhHHHhhhc------cCCcHHHHHhhHhhcceeHHHHHhhhhh---------------hhcccccCCceEEEEEecCce
Confidence 7654332211 1224567889999999999988775441 112234699999999999999
Q ss_pred EEEEEeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCC---------CC
Q 009070 372 IIVANCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKP---------WI 442 (544)
Q Consensus 372 L~vANVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~---------~v 442 (544)
+|++||||||++++|+|+++.-|.||+|..|.|++||..+||.|-. .||+|.|++||+|||+.+|. .+
T Consensus 139 ~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMI---qRvNGsLAVSRAlGDydyK~v~~kgp~eQlV 215 (379)
T KOG0697|consen 139 IYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKNVPGKGPTEQLV 215 (379)
T ss_pred EEEEecCcchhheecCCceEEeccCCCCCChHHHHHHhcCCCeEEE---EEecceeeeehhccCcccccCCCCCchhccc
Confidence 9999999999999999999999999999999999999999999864 59999999999999999983 58
Q ss_pred cCCCeEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcC
Q 009070 443 IPEPEVVFIPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKG 522 (544)
Q Consensus 443 ~~~Pdv~~~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~G 522 (544)
+|+|+|+.......|+||||||||+||+|+++|++++++.++.. ..+...+|..+++.++.+|
T Consensus 216 SPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~V-----------------t~dL~~vcn~VvDtCLhKG 278 (379)
T KOG0697|consen 216 SPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEV-----------------TSDLEEVCNDVVDTCLHKG 278 (379)
T ss_pred CCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhhee-----------------cccHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999998642 4578899999999999999
Q ss_pred CCCCeEEEEEEeccCccc
Q 009070 523 SKDNISVIVVDLKAQRKF 540 (544)
Q Consensus 523 s~DNiTVIVV~L~~~~k~ 540 (544)
++||+|+|+|.|.+..|.
T Consensus 279 SRDNMsivlvcfp~APkv 296 (379)
T KOG0697|consen 279 SRDNMSIVLVCFPGAPKV 296 (379)
T ss_pred CccCceEEEEecCCCCCC
Confidence 999999999999877654
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.8e-48 Score=407.31 Aligned_cols=262 Identities=35% Similarity=0.514 Sum_probs=217.8
Q ss_pred ceEEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q 009070 215 PLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEE 294 (544)
Q Consensus 215 ~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~ 294 (544)
..+|..|++|.|++|||++++..++.+. .+.. ........||||||||||+.+|+||++++++.|.+.
T Consensus 65 ~~~~~~s~~G~R~~nED~~~~~~~~~~~-----------~~~~-~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~ 132 (365)
T PLN03145 65 VRSGAWADIGSRSSMEDVYICVDNFMSD-----------FGLK-NSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVED 132 (365)
T ss_pred eEEEEEccccCCCCCCCceEeccccccc-----------cccc-ccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 4579999999999999999886654210 0000 001224689999999999999999999999998753
Q ss_pred HHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEE
Q 009070 295 IGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIV 374 (544)
Q Consensus 295 l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~v 374 (544)
.. ....+.++|.++|..+|+++..... ......+|||++++++.++++|+
T Consensus 133 ~~--------------~~~~~~~al~~af~~~d~~~~~~~~----------------~~~~~~~GTTavv~li~~~~l~v 182 (365)
T PLN03145 133 ED--------------FPREIEKVVSSAFLQTDTAFAEACS----------------LDASLASGTTALAALVVGRSLVV 182 (365)
T ss_pred hc--------------cchhHHHHHHHHHHHHhHHHHhhhc----------------cccCCCCcCcEEEEEEECCeEEE
Confidence 21 1124678899999999999865431 01123589999999999999999
Q ss_pred EEeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCC-------CCcCCCe
Q 009070 375 ANCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKP-------WIIPEPE 447 (544)
Q Consensus 375 ANVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~-------~v~~~Pd 447 (544)
|||||||+|++|++++++||+||++.++.|+.||.+.||.+. .+|+.|.+++||+|||..+|. .++++|+
T Consensus 183 aNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePd 259 (365)
T PLN03145 183 ANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPE 259 (365)
T ss_pred EecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCcee---cceECCccccccccccccccccccccCCCcceEEE
Confidence 999999999999999999999999999999999999999885 368999999999999988763 4789999
Q ss_pred EEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCCCCe
Q 009070 448 VVFIPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSKDNI 527 (544)
Q Consensus 448 v~~~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~DNi 527 (544)
+..+++.++|+|||||||||||+|+++++++++++.+.. ..+++++|+.|++.|+++|+.|||
T Consensus 260 v~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~-----------------~~~p~~aa~~Lv~~Al~rgs~DNI 322 (365)
T PLN03145 260 LMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQE-----------------HNDPVMCSKELVDEALKRKSGDNL 322 (365)
T ss_pred EEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhc-----------------CCCHHHHHHHHHHHHHhCCCCCCE
Confidence 999999999999999999999999999999998875421 235789999999999999999999
Q ss_pred EEEEEEeccCc
Q 009070 528 SVIVVDLKAQR 538 (544)
Q Consensus 528 TVIVV~L~~~~ 538 (544)
|||||+|+...
T Consensus 323 TvIVV~l~~~~ 333 (365)
T PLN03145 323 AVVVVCFQSQP 333 (365)
T ss_pred EEEEEEeecCC
Confidence 99999998743
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-48 Score=404.02 Aligned_cols=267 Identities=46% Similarity=0.683 Sum_probs=229.1
Q ss_pred ccceEEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHH
Q 009070 213 CIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALA 292 (544)
Q Consensus 213 ~~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~ 292 (544)
....++.++.+|+|..|||++...+++...+. .......||||||||||..+|+|++++|+..+.
T Consensus 38 ~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~---------------~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~ 102 (330)
T KOG0698|consen 38 SYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDV---------------GGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLL 102 (330)
T ss_pred cccceEEEecCCCCCccCcceeeccccccccc---------------CCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 44456777999999999999998876542110 011158999999999999999999999999999
Q ss_pred HHHHhhhcccCccccccchhhHHHHHHHHHHH-HhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCC-
Q 009070 293 EEIGIIKNNLTDESTKVTRQGQWEKTFTSCFL-KVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSS- 370 (544)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~-~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~- 370 (544)
+.+...... ..++++++++|. ++|.++.... .....+|||++++++..+
T Consensus 103 ~~~~~~~~~-----------~~~~~a~~~~F~~~~D~~~~~~~------------------~~~~~~gstav~~vi~~~~ 153 (330)
T KOG0698|consen 103 EQLAFPKDR-----------QDVKDALRRAFLTKTDSEFLEKR------------------EDNRSGGSTAVVALIKKGR 153 (330)
T ss_pred hhhhcccch-----------HHHHHHHHHHHHHHHHHHHHhhc------------------cCCCCCcceeeeeeEecCC
Confidence 876543221 458899999999 6999988641 012457899988888855
Q ss_pred eEEEEEeCCceEEEEeCC-eeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCC-ccccccccccccccccccC-CCCcCCCe
Q 009070 371 HIIVANCGDSRAVLCRGK-EPMVLSVDHKPNREDEYARIEASGGKVIQWNG-HRVFGVLAMSRSIGDRYLK-PWIIPEPE 447 (544)
Q Consensus 371 ~L~vANVGDSRa~L~R~g-~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g-~Rv~g~LavSRsiGd~~lk-~~v~~~Pd 447 (544)
+|||||+|||||+|+++| .+++||.||+|..+.|+.||+++||++..+.+ +||+|.|++||+|||..+| ++++++|+
T Consensus 154 ~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pe 233 (330)
T KOG0698|consen 154 KLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPE 233 (330)
T ss_pred EEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCc
Confidence 999999999999999865 89999999999999999999999999998876 8999999999999999999 89999999
Q ss_pred EEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCCCCe
Q 009070 448 VVFIPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSKDNI 527 (544)
Q Consensus 448 v~~~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~DNi 527 (544)
+...++...|+|||||||||||+|++||++++++..+. ....+..++..|.+.|+.+|+.|||
T Consensus 234 i~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~-----------------~~~~~~~a~~~l~~~a~~~~s~Dni 296 (330)
T KOG0698|consen 234 IQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELA-----------------SISSPLAAAKLLATEALSRGSKDNI 296 (330)
T ss_pred eEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhh-----------------ccccHHHHHHHHHHHHhhcCCCCCe
Confidence 99999999999999999999999999999999999540 1356889999999999999999999
Q ss_pred EEEEEEeccCccc
Q 009070 528 SVIVVDLKAQRKF 540 (544)
Q Consensus 528 TVIVV~L~~~~k~ 540 (544)
|||||+|+.+.+.
T Consensus 297 tvvvV~l~~~~~~ 309 (330)
T KOG0698|consen 297 TVVVVRLKSSPKS 309 (330)
T ss_pred EEEEEEecCcccc
Confidence 9999999988754
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=6.7e-46 Score=372.63 Aligned_cols=247 Identities=42% Similarity=0.651 Sum_probs=204.4
Q ss_pred EEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHHHHH
Q 009070 217 WGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIG 296 (544)
Q Consensus 217 ~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l~ 296 (544)
||..+.+|+|.+|||++++..++... .......+|+|||||||..+++|++++++..+.+...
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~-----------------~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~ 64 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSN-----------------SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLS 64 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCC-----------------TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCcccc-----------------CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcc
Confidence 78999999999999999998765321 1123789999999999999999999999988887765
Q ss_pred hhhcccCccccccchhhHHHHHHHHHHHH-hhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEEE
Q 009070 297 IIKNNLTDESTKVTRQGQWEKTFTSCFLK-VDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVA 375 (544)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~i~~~l~~af~~-~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~vA 375 (544)
..... .+.++|..+|.+ ++..+.... ... ....+|||+++++|.+++||+|
T Consensus 65 ~~~~~------------~~~~al~~a~~~~~~~~~~~~~---------------~~~-~~~~~GsTa~v~li~~~~l~va 116 (254)
T PF00481_consen 65 FNDGN------------DIEEALRQAFLAFTDESLYSDS---------------ENN-ESSKSGSTATVALIDGNKLYVA 116 (254)
T ss_dssp HHTCH------------HHHHHHHHHHHHHHHHHHHHHH---------------HHH-THTTSEEEEEEEEEETTEEEEE
T ss_pred ccccc------------chhhcccceeeecccccccccc---------------ccc-ccccccccccccccccceeEEE
Confidence 44321 478899999999 888776521 001 3357999999999999999999
Q ss_pred EeCCceEEEEeCCeeE-EcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCC----CCcCCCeEEE
Q 009070 376 NCGDSRAVLCRGKEPM-VLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKP----WIIPEPEVVF 450 (544)
Q Consensus 376 NVGDSRa~L~R~g~~~-~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~----~v~~~Pdv~~ 450 (544)
||||||+|+++++... +||+||+|.++.|+.||+++||.+.. .+|+.|.|++||+|||..+|+ +++++|++..
T Consensus 117 nvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~--~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~ 194 (254)
T PF00481_consen 117 NVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE--NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISE 194 (254)
T ss_dssp EESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE--TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEE
T ss_pred eeeeeeeeeeeccccccccccccccchhhccceeecccccccc--chhhhhccccccccccccccccccceeeeeccccc
Confidence 9999999999999988 99999999999999999999999875 689999999999999999998 9999999999
Q ss_pred EeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCCCCe
Q 009070 451 IPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSKDNI 527 (544)
Q Consensus 451 ~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~DNi 527 (544)
+++.++|+|||||||||||+|+++|+++++++.... ...++.+|+.|+++|+++|+.|||
T Consensus 195 ~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~-----------------~~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 195 VDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNS-----------------GRSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp EEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHH-----------------HSHHHHHHHHHHHHHHHTTHHSHE
T ss_pred ccccccceEEEEEcccccccCCHHHHHHHHHHHHhc-----------------CCcHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999999999999995421 114899999999999999999997
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1e-43 Score=374.22 Aligned_cols=244 Identities=34% Similarity=0.507 Sum_probs=203.4
Q ss_pred ccceEEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHH
Q 009070 213 CIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALA 292 (544)
Q Consensus 213 ~~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~ 292 (544)
....+|+.+++|+|++|||++++... ....||||||||||..+++|+++.+++.+.
T Consensus 20 ~~~~~g~~s~~G~R~~nED~~~v~~~------------------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~ 75 (381)
T PTZ00224 20 SIFRCASACVNGYRESMEDAHLLYLT------------------------DDWGFFGVFDGHVNDECSQYLARAWPQALE 75 (381)
T ss_pred ccEEEEEEeCCCCCCCCCCeeEeccC------------------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHH
Confidence 44568999999999999999876421 144699999999999999999999987664
Q ss_pred HHHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEe-CCe
Q 009070 293 EEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVC-SSH 371 (544)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~-~~~ 371 (544)
+.. .. ...+.|+++|..+|+++.... ..+|||+++++|. +.+
T Consensus 76 ~~~----~~------------~~~~~l~~a~~~~d~~i~~~~---------------------~~~GsTatv~lI~~~~~ 118 (381)
T PTZ00224 76 KEP----EP------------MTDERMEELCLEIDEEWMDSG---------------------REGGSTGTFCVIMKDVH 118 (381)
T ss_pred hcc----cc------------ccHHHHHHHHHHHHHHHHhcc---------------------cCCCCeEEEEEEEECCE
Confidence 321 00 012458888999999887432 1359999988876 579
Q ss_pred EEEEEeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccC---------CCC
Q 009070 372 IIVANCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWI 442 (544)
Q Consensus 372 L~vANVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk---------~~v 442 (544)
+|||||||||+|++|+|++++||+||++.++.|+.||...||.+. .+|+.|.+++||+|||..+| +.+
T Consensus 119 l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~---~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v 195 (381)
T PTZ00224 119 LQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVV---SNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKV 195 (381)
T ss_pred EEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEec---cccccCceeeecccCCcccccccccccccCcc
Confidence 999999999999999999999999999999999999999999886 36999999999999997654 346
Q ss_pred cCCCeEEEEeccCCCeEEEEecCCCCC-CCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhc
Q 009070 443 IPEPEVVFIPRARDDECLILASDGLWD-VMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQK 521 (544)
Q Consensus 443 ~~~Pdv~~~~l~~~D~fLILaSDGLwD-~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~ 521 (544)
+++|++..+.+.++| ||||||||||| +++++|+++++++.+.. ..+++.+|+.|++.|+.+
T Consensus 196 ~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~-----------------~~~~~~aA~~Lv~~A~~r 257 (381)
T PTZ00224 196 IAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVVAFVKEQLET-----------------CDDLAVVAGRVCDEAIRR 257 (381)
T ss_pred eeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhc-----------------CCCHHHHHHHHHHHHHhc
Confidence 789999999988665 89999999999 89999999999864210 246789999999999999
Q ss_pred CCCCCeEEEEEEeccCc
Q 009070 522 GSKDNISVIVVDLKAQR 538 (544)
Q Consensus 522 Gs~DNiTVIVV~L~~~~ 538 (544)
|+.||||||||++...+
T Consensus 258 Gs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 258 GSKDNISCLIVQLKDGA 274 (381)
T ss_pred CCCCCEEEEEEEeeCCC
Confidence 99999999999998543
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=343.34 Aligned_cols=248 Identities=30% Similarity=0.389 Sum_probs=205.9
Q ss_pred eEEEeeccCC-CCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q 009070 216 LWGSVSIRGR-RPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEE 294 (544)
Q Consensus 216 ~~G~~S~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~ 294 (544)
.++..++.|. |.+|||++++.++.. ... ..||+|||||||++++++|++.+++.|.+.
T Consensus 9 ~~~~~s~~g~~R~~NeD~~~~~~~~~--------------------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~ 67 (262)
T COG0631 9 KVAGLSDVGTVRKHNEDAFLIKPNEN--------------------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARL 67 (262)
T ss_pred eeeeeccCCCccCCCCcceeeccccC--------------------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHH
Confidence 3455566555 999999999865221 112 579999999999999999999999999998
Q ss_pred HHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEE
Q 009070 295 IGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIV 374 (544)
Q Consensus 295 l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~v 374 (544)
+........ ...+.+.+.+.+..++.++..... .......||||++++++.++++|+
T Consensus 68 ~~~~~~~~~--------~~~~~~~l~~~~~~~n~~i~~~~~---------------~~~~~~~mgtTl~~~~~~~~~l~~ 124 (262)
T COG0631 68 FDETNFNSL--------NESLEELLKEAILKANEAIAEEGQ---------------LNEDVRGMGTTLVLLLIRGNKLYV 124 (262)
T ss_pred HHhcccccc--------chhHHHHHHHHHHHHHHHHHHhhh---------------cccccCCCceeEEEEEEECCeEEE
Confidence 765433211 011678999999999999987641 123346799999999999999999
Q ss_pred EEeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcCCCeEEEEecc
Q 009070 375 ANCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFIPRA 454 (544)
Q Consensus 375 ANVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~~l~ 454 (544)
|||||||+|++|+|++++||.||++.+..++.|+...++...+ .|.+ ++||+||+... +.|++....+.
T Consensus 125 a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~~~~~---~~~~---~ltralG~~~~-----~~p~~~~~~~~ 193 (262)
T COG0631 125 ANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEEARSH---PRRN---ALTRALGDFDL-----LEPDITELELE 193 (262)
T ss_pred EEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHHHHhC---ccch---hhhhhcCCCcc-----cceeEEEEEcC
Confidence 9999999999999999999999999999999987766655443 2333 89999999986 78999999999
Q ss_pred CCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCCCCeEEEEEEe
Q 009070 455 RDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSKDNISVIVVDL 534 (544)
Q Consensus 455 ~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~DNiTVIVV~L 534 (544)
++ +|+|||||||||.+++++++++++. ...++.++++|++.|+++|+.||+|+|+|++
T Consensus 194 ~~-d~llL~SDGl~d~v~~~~i~~il~~---------------------~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~ 251 (262)
T COG0631 194 PG-DFLLLCSDGLWDVVSDDEIVDILKN---------------------SETPQEAADKLIELALEGGGPDNITVVLVRL 251 (262)
T ss_pred CC-CEEEEECCCCccCcCHHHHHHHHhc---------------------CCCHHHHHHHHHHHHHhcCCCCceEEEEEEe
Confidence 88 6899999999999999999999996 4578999999999999999999999999999
Q ss_pred ccCccc
Q 009070 535 KAQRKF 540 (544)
Q Consensus 535 ~~~~k~ 540 (544)
..+.+.
T Consensus 252 ~~~~~~ 257 (262)
T COG0631 252 NGEGET 257 (262)
T ss_pred eccccc
Confidence 887643
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-41 Score=334.76 Aligned_cols=161 Identities=37% Similarity=0.583 Sum_probs=147.6
Q ss_pred CCcccEEEEEEeCCeEEEEEeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCcccccccccccccccc
Q 009070 357 TVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDR 436 (544)
Q Consensus 357 ~~GSTavvalI~~~~L~vANVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~ 436 (544)
.+|||++|+++.+.+|||||.||||||++|+|+++-||.||+|..+.|..||.++||.|.. .+||+|.|++||+|||.
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl--DGRVNGGLNLSRA~GDH 406 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL--DGRVNGGLNLSRAFGDH 406 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee--cceecCccchhhhhhhh
Confidence 3699999999999999999999999999999999999999999999999999999999974 57999999999999999
Q ss_pred ccCC---------CCcCCCeEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHH
Q 009070 437 YLKP---------WIIPEPEVVFIPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAA 507 (544)
Q Consensus 437 ~lk~---------~v~~~Pdv~~~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~ 507 (544)
.+|. .|++-|+|....|++.|+|+||||||||++|+.+|++++++..|.. ....
T Consensus 407 aYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~-----------------n~~l 469 (542)
T KOG0699|consen 407 AYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAK-----------------NSSL 469 (542)
T ss_pred hhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhc-----------------CchH
Confidence 9984 5889999999999999999999999999999999999999997641 2456
Q ss_pred HHHHHHHHHHHHhcC------CCCCeEEEEEEecc
Q 009070 508 QAAAEYLSMLALQKG------SKDNISVIVVDLKA 536 (544)
Q Consensus 508 q~aAe~Lv~~Al~~G------s~DNiTVIVV~L~~ 536 (544)
..+|+.|.+.++.-. +.||+|||++.|++
T Consensus 470 s~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkr 504 (542)
T KOG0699|consen 470 SEICEELCDACLAPSTDGDGTGCDNMTVIITTFKR 504 (542)
T ss_pred HHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEecc
Confidence 689999999999742 46999999999984
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.4e-36 Score=297.73 Aligned_cols=253 Identities=43% Similarity=0.649 Sum_probs=210.5
Q ss_pred eEEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q 009070 216 LWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEI 295 (544)
Q Consensus 216 ~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l 295 (544)
.++..+..|.|+.|||++++..... ..+..+|+|||||||+..++++++.+.+.+.+.+
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~---------------------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~ 60 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLN---------------------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCC---------------------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHH
Confidence 3677888999999999998854210 0256899999999999999999999999998876
Q ss_pred HhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEEE
Q 009070 296 GIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVA 375 (544)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~vA 375 (544)
..... .....+...|+++|.+++.++...... ......+|||++++++.+++++++
T Consensus 61 ~~~~~---------~~~~~~~~~l~~~~~~~~~~l~~~~~~---------------~~~~~~~gtT~~~~~~~~~~l~~~ 116 (254)
T cd00143 61 EETLT---------LSEEDIEEALRKAFLRADEEILEEAQD---------------EPDDARSGTTAVVALIRGNKLYVA 116 (254)
T ss_pred hhccc---------cchHHHHHHHHHHHHHHHHHHHHhhhh---------------ccCCCCCCCcEEEEEEECCEEEEE
Confidence 43321 123457788999999999998765411 022356899999999999999999
Q ss_pred EeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcCCCeEEEEeccC
Q 009070 376 NCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFIPRAR 455 (544)
Q Consensus 376 NVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~~l~~ 455 (544)
|+||||+|++|+++++++|.||++.++.++.|+...++.+. ..+..+...+||++|+..+|+.+.++|++....+.+
T Consensus 117 ~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~ 193 (254)
T cd00143 117 NVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS---NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTE 193 (254)
T ss_pred EecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE---eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCC
Confidence 99999999999999999999999999999999999988753 235556788999999999998889999999999844
Q ss_pred CCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCCCCeEEEEEEe
Q 009070 456 DDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSKDNISVIVVDL 534 (544)
Q Consensus 456 ~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~DNiTVIVV~L 534 (544)
.+++||||||||||+++++++.+++..... ..+++++|+.|++.|..+++.||+|+||+++
T Consensus 194 ~~d~ill~SDG~~~~l~~~~i~~~~~~~~~------------------~~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 194 DDDFLILASDGLWDVLSNQEAVDIVRSELA------------------KEDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred CCcEEEEECCCCeeccChHHHHHHHHHHhc------------------ccCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 455799999999999999999999988310 0168899999999999999999999999975
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.1e-35 Score=295.96 Aligned_cols=249 Identities=48% Similarity=0.731 Sum_probs=208.0
Q ss_pred eEEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q 009070 216 LWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEI 295 (544)
Q Consensus 216 ~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l 295 (544)
.+|+.+.+|+|..|||++++..++ ..+..+|+|||||||..+++++++.+...+.+..
T Consensus 7 ~~~~~~~~~~r~~neD~~~~~~~~----------------------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~ 64 (255)
T smart00332 7 RYGLSSMQGVRKPMEDAHVITPDL----------------------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEEL 64 (255)
T ss_pred eEEEecCCCCCCCCcceEEEeccC----------------------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhH
Confidence 567788889999999999885431 0267899999999999999999999998887654
Q ss_pred HhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEEE
Q 009070 296 GIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVA 375 (544)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~vA 375 (544)
..... ....+.+.|+++|.+++.++....... .....+|||++++++..+++|++
T Consensus 65 ~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~gtT~~~~~~~~~~l~~~ 119 (255)
T smart00332 65 IKHKD----------ELEDVEEALRKAFLKTDEEILEELESL---------------EEDAGSGSTAVVALISGNKLYVA 119 (255)
T ss_pred hhccc----------chhHHHHHHHHHHHHHHHHHHHhhhhc---------------cCCCCCCccEEEEEEECCEEEEE
Confidence 32111 113477889999999999987654111 12346899999999999999999
Q ss_pred EeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcCCCeEEEEeccC
Q 009070 376 NCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFIPRAR 455 (544)
Q Consensus 376 NVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~~l~~ 455 (544)
|+||||+|++|++++.+||.||++.++.|..||...++.+.. ++..+...+||++|+..+|+.++++|++...++.+
T Consensus 120 ~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~ 196 (255)
T smart00332 120 NVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTE 196 (255)
T ss_pred eccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEEC---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecC
Confidence 999999999999999999999999999999999999998753 36777789999999999999999999999999744
Q ss_pred CCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCCCCeEEEEE
Q 009070 456 DDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSKDNISVIVV 532 (544)
Q Consensus 456 ~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~DNiTVIVV 532 (544)
.+++||||||||||+++++++.+++.+... ..++..+|+.|.+.|+.+++.||+|||||
T Consensus 197 ~~d~ill~SDGv~~~l~~~~i~~~~~~~~~------------------~~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 197 KDDFLILASDGLWDVLSNQEVVDIVRKHLS------------------KSDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred CCcEEEEECCccccCCCHHHHHHHHHHHhh------------------cCCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 455799999999999999999999988421 01478899999999999999999999985
No 10
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=313.34 Aligned_cols=234 Identities=31% Similarity=0.452 Sum_probs=186.4
Q ss_pred CCcceEEEEEcCCCCChHHHHHHHHHHHHHHHHHHhhhccc----Cccc----------------cccchhhHHHHHHHH
Q 009070 262 GLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNL----TDES----------------TKVTRQGQWEKTFTS 321 (544)
Q Consensus 262 ~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l~~~~~~~----~~~~----------------~~~~~~~~i~~~l~~ 321 (544)
+.++.|+||||||||..+++|++++|..++..++....... .... ........+.++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 44889999999999999999999999999987665532221 0000 000114678899999
Q ss_pred HHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEEEEeCCceEEEEe---CC---eeEEcCC
Q 009070 322 CFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCR---GK---EPMVLSV 395 (544)
Q Consensus 322 af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~vANVGDSRa~L~R---~g---~~~~LS~ 395 (544)
||.++++++.....+. ......-..+|||++|+++++..|||||+|||||+|.+ ++ .++|||.
T Consensus 176 Af~~tee~fl~~v~~~-----------~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~ 244 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQ-----------LQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLST 244 (390)
T ss_pred HHHHHHHHHHHHHHHh-----------hccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecCh
Confidence 9999999997544111 22233345799999999999999999999999999975 33 5789999
Q ss_pred CCCCCCHHHHHHHHHcCCe---eeeeCCccccccccccccccccccC---------------------CCCcCCCeEEEE
Q 009070 396 DHKPNREDEYARIEASGGK---VIQWNGHRVFGVLAMSRSIGDRYLK---------------------PWIIPEPEVVFI 451 (544)
Q Consensus 396 DH~~~~~~E~~RI~~~gg~---v~~~~g~Rv~g~LavSRsiGd~~lk---------------------~~v~~~Pdv~~~ 451 (544)
||+..++.|++||+..+.. +.....+||.|.|.+||+|||.++| |+++++|+++..
T Consensus 245 dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~H 324 (390)
T KOG0700|consen 245 DHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHH 324 (390)
T ss_pred hhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEE
Confidence 9999999999999987652 2223447999999999999999988 578999999999
Q ss_pred eccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCC
Q 009070 452 PRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGS 523 (544)
Q Consensus 452 ~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs 523 (544)
+|.+.|.||||||||||++|+++|+++++..++... ..-+.+|+.|++.|+.+..
T Consensus 325 rL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~-----------------~pd~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 325 KLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGK-----------------FPDGNPATHLIRHALGRAA 379 (390)
T ss_pred EcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccC-----------------CCCCCHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999965310 1223578999999987654
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=2.2e-35 Score=327.19 Aligned_cols=261 Identities=23% Similarity=0.238 Sum_probs=186.3
Q ss_pred ceEEEeeccCC-CCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHH
Q 009070 215 PLWGSVSIRGR-RPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAE 293 (544)
Q Consensus 215 ~~~G~~S~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~ 293 (544)
..++..|++|+ |++|||++.+..++.+... .. ........+|+|||||||+.+|++|++.+++.|.+
T Consensus 375 l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~--------~~----~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~ 442 (645)
T PRK14559 375 LEDAGRTDVGRQRHHNEDYFGINTRIQKLEN--------PH----GRIVQARGLYILCDGMGGHAAGEVASALAVETLQQ 442 (645)
T ss_pred EEEEEECCCCCCCcccCCccccccccccccc--------cc----ccccccceEEEEEeCCCCchhHHHHHHHHHHHHHH
Confidence 45788999997 9999999877543211000 00 00001357899999999999999999999999887
Q ss_pred HHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEE
Q 009070 294 EIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHII 373 (544)
Q Consensus 294 ~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~ 373 (544)
.+...... . ....+.|+++|..+|+.|....... ......+||||++++++.++++|
T Consensus 443 ~~~~~~~~---~-------~~~~~~L~~ai~~AN~~I~~~~~~~-------------~~~~~~~MGTTlv~alI~~~~l~ 499 (645)
T PRK14559 443 YFQQHWQD---E-------LPDEETIREAIYLANEAIYDLNQQN-------------ARSGSGRMGTTLVMALVQDTQVA 499 (645)
T ss_pred HHHhhhcc---c-------ccHHHHHHHHHHHHHHHHHHHhhhc-------------ccccCCCCCceeeeEEEECCEEE
Confidence 76532111 0 0124678899999999987643111 00123469999999999999999
Q ss_pred EEEeCCceEEEE-eCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcCCCeEEEEe
Q 009070 374 VANCGDSRAVLC-RGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFIP 452 (544)
Q Consensus 374 vANVGDSRa~L~-R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~~ 452 (544)
++||||||+|++ |+|++++||+||++.+...++++....+ ..| .+...+||++|+...+. .+|++..+.
T Consensus 500 ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~~Gi~~~~a------~~~-p~~~~LTrALG~~~~~~---l~Pdi~~~~ 569 (645)
T PRK14559 500 VAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQRGVEPQIA------YAR-PDAYQLTQALGPRDNSA---IQPDIQFLE 569 (645)
T ss_pred EEEecCceEEEEecCCeEEEeCCCCCHHHHHHHhCCCHHHH------hcC-cccceeeeccCCCCCCc---ccceEEEEE
Confidence 999999999988 5789999999999875433332211100 012 24568999999876432 579999999
Q ss_pred ccCCCeEEEEecCCCCCC--CCH---HHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCCCCe
Q 009070 453 RARDDECLILASDGLWDV--MTN---EEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSKDNI 527 (544)
Q Consensus 453 l~~~D~fLILaSDGLwD~--ls~---~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~DNi 527 (544)
+.++| +||||||||||+ +.. +++..++.. ..+++++|++|++.|+.+|++|||
T Consensus 570 L~~gD-~lLLCSDGL~D~~~ve~~~~~~l~~il~~---------------------~~~l~~aa~~Li~~Al~~gg~DNI 627 (645)
T PRK14559 570 IEEDT-LLLLCSDGLSDNDLLETHWQTHLLPLLSS---------------------SANLDQGLNKLIDLANQYNGHDNI 627 (645)
T ss_pred cCCCC-EEEEECCCCCCCcccchHHHHHHHHHHhc---------------------CCCHHHHHHHHHHHHHHcCCCCcE
Confidence 88755 688999999994 443 233344433 346788999999999999999999
Q ss_pred EEEEEEeccCcccCC
Q 009070 528 SVIVVDLKAQRKFKS 542 (544)
Q Consensus 528 TVIVV~L~~~~k~k~ 542 (544)
|||||+++.......
T Consensus 628 TvIvV~l~~~p~~~~ 642 (645)
T PRK14559 628 TAILVRLKVRPQLSL 642 (645)
T ss_pred EEEEEEeccCCCCCc
Confidence 999999987766544
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=5.2e-28 Score=241.04 Aligned_cols=248 Identities=30% Similarity=0.455 Sum_probs=184.9
Q ss_pred CCcceEEEEEcCCCCChHHHHHHHHHHHHHHHHHHhhhccc------Cccc--------------------cccchhhHH
Q 009070 262 GLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNL------TDES--------------------TKVTRQGQW 315 (544)
Q Consensus 262 ~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l~~~~~~~------~~~~--------------------~~~~~~~~i 315 (544)
..+.++|.+||||.|..+|-.|++.+++.+.+.+......+ .+.. ........+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 45789999999999999999999999999988766432220 0000 011123456
Q ss_pred HHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEEEEeCCceEEEEeCCeeEEcCC
Q 009070 316 EKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVLSV 395 (544)
Q Consensus 316 ~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~vANVGDSRa~L~R~g~~~~LS~ 395 (544)
.-+|+.||+.+|.+|.+....+ ...+|||+++++..-++||+||.|||||+++|++++++||+
T Consensus 221 iGAlEsAFqemDeqiarer~~~-----------------~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~ 283 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVW-----------------RLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSK 283 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-----------------cCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeeccc
Confidence 7899999999999998754211 23589999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHc--------CCe------------------eee-------e-------------------CCccc
Q 009070 396 DHKPNREDEYARIEAS--------GGK------------------VIQ-------W-------------------NGHRV 423 (544)
Q Consensus 396 DH~~~~~~E~~RI~~~--------gg~------------------v~~-------~-------------------~g~Rv 423 (544)
+.+|.. ||+|++.. |+. +.+ | ...|+
T Consensus 284 efTPet--ERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRl 361 (493)
T KOG1323|consen 284 EFTPET--ERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARL 361 (493)
T ss_pred ccCcHH--HHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhh
Confidence 999865 66676643 111 111 0 12566
Q ss_pred cccccccccccccccC---------CCCcCCCeEEEEecc----CCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhccc
Q 009070 424 FGVLAMSRSIGDRYLK---------PWIIPEPEVVFIPRA----RDDECLILASDGLWDVMTNEEACEVARKRILLWHKK 490 (544)
Q Consensus 424 ~g~LavSRsiGd~~lk---------~~v~~~Pdv~~~~l~----~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~ 490 (544)
.+.+.+||.+||..+| |++++.|+|+.+.+. ..|+.+|||||||||+++++|+..++++++......
T Consensus 362 l~TigVsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~ 441 (493)
T KOG1323|consen 362 LATIGVSRGLGDHHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPA 441 (493)
T ss_pred hhhheeccccCcceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCC
Confidence 6789999999998654 788999999998875 245589999999999999999999999976432211
Q ss_pred CCCCCccccCCCCChHHHHHHHHHHHHHHh-------------cCCCCCeEEEEEEeccCccc
Q 009070 491 HGAPPLVERGKEIDPAAQAAAEYLSMLALQ-------------KGSKDNISVIVVDLKAQRKF 540 (544)
Q Consensus 491 ~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~-------------~Gs~DNiTVIVV~L~~~~k~ 540 (544)
+ ......+|+.|+..|.. .|+.|+|||.||-|+...++
T Consensus 442 D------------p~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~~ 492 (493)
T KOG1323|consen 442 D------------PSRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAAP 492 (493)
T ss_pred C------------hhHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCCCCC
Confidence 1 11234567777766642 15789999999999876554
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=7.8e-23 Score=227.01 Aligned_cols=246 Identities=26% Similarity=0.454 Sum_probs=208.7
Q ss_pred cceEEEeeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHH
Q 009070 214 IPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAE 293 (544)
Q Consensus 214 ~~~~G~~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~ 293 (544)
.+.||.+.+.|.|..+-=+...+.+|.. .....||.+||-+-.....+.+.++..++.+
T Consensus 521 ~~t~Gv~~~~gqrnk~c~~~~~v~nf~~---------------------~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~e 579 (1081)
T KOG0618|consen 521 LWTYGVAGVSGQRNKVCSRAVWVENFFL---------------------NPQATFGCFDGSRNSRVLSLVQDTMASYLAE 579 (1081)
T ss_pred heeeccchhcccccchhhhhhhhhhccc---------------------CCcceEEEEcCCCchhHHHHHHHHHHHHHHH
Confidence 3568999999999877655554444432 2568999999999999999999999999999
Q ss_pred HHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeC----
Q 009070 294 EIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCS---- 369 (544)
Q Consensus 294 ~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~---- 369 (544)
++..+.+. .+.++.+|+..+++++.... .-|..++.+.|..
T Consensus 580 ev~~~~~e--------------t~~mr~~fl~~~rklg~~g~---------------------~lg~~~~~~~i~~d~~~ 624 (1081)
T KOG0618|consen 580 EVQLYGNE--------------TEQMRNTFLRLNRKLGEEGQ---------------------VLGGSVVLCQIVEDSLS 624 (1081)
T ss_pred HHHhccCh--------------HHHHHHHHHHHhhhhhhhhc---------------------cccchhhheeecccccC
Confidence 98766543 23489999999999965541 2344444444432
Q ss_pred ----CeEEEEEeCCceEEEEeCCeeEEcCCCC-CCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcC
Q 009070 370 ----SHIIVANCGDSRAVLCRGKEPMVLSVDH-KPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIP 444 (544)
Q Consensus 370 ----~~L~vANVGDSRa~L~R~g~~~~LS~DH-~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~~v~~ 444 (544)
.++++||+|+|.++++|+|+..++|+-. ...+++|.+||..++|++. ++++++|+...||++|...+.|++.|
T Consensus 625 ~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~--ed~k~ngvt~~tR~iG~~~l~P~v~p 702 (1081)
T KOG0618|consen 625 PASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFIT--EDNKLNGVTSSTRAIGPFSLFPHVLP 702 (1081)
T ss_pred cccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeec--CCCeeeceeeeeeecccccccccccC
Confidence 5789999999999999999999988754 5558999999999999986 37899999999999999999999999
Q ss_pred CCeEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcCCC
Q 009070 445 EPEVVFIPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKGSK 524 (544)
Q Consensus 445 ~Pdv~~~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~Gs~ 524 (544)
.|+|..+.+++.|+|||+|+-+||++|+-+++++.+|+ ..+|-.||++|++.|..+|..
T Consensus 703 ~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn---------------------~~dpL~AAkKL~d~AqSYgc~ 761 (1081)
T KOG0618|consen 703 DPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRN---------------------VEDPLLAAKKLCDLAQSYGCA 761 (1081)
T ss_pred CCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhc---------------------CCchHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999997 568889999999999999999
Q ss_pred CCeEEEEEEeccCc
Q 009070 525 DNISVIVVDLKAQR 538 (544)
Q Consensus 525 DNiTVIVV~L~~~~ 538 (544)
||++|+||+|....
T Consensus 762 ~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 762 ENVSVLVVRLNHLE 775 (1081)
T ss_pred cCeeEEEEEeecch
Confidence 99999999997543
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.86 E-value=1.2e-20 Score=188.95 Aligned_cols=194 Identities=20% Similarity=0.229 Sum_probs=130.7
Q ss_pred cceEEEEEcCCCCChHHHHH----HHHHHHHHHHHHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccC
Q 009070 264 TSHFFGVYDGHGGSQAANYC----RERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVN 339 (544)
Q Consensus 264 ~~~lfgV~DGhGG~~~a~~a----s~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~ 339 (544)
...+.|||||+|||.--.+- ++.|++...+..+.. +.....+...|..+|.++-.+
T Consensus 102 ~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~----------~~~~~~P~~lL~~ay~~l~~~---------- 161 (330)
T KOG1379|consen 102 HAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNS----------DFNPSDPVNLLEKAYAELKSQ---------- 161 (330)
T ss_pred ccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhccc----------ccCCCChHHHHHHHHHHHhhc----------
Confidence 66899999999998643333 333344333333221 111225778888888766432
Q ss_pred CCCCCchhhhhhccCCCCCcccEEEEEEe--CCeEEEEEeCCceEEEEeCCeeEEcCCCCCC--CCHHHHHHHHHcCCee
Q 009070 340 AGDGDASEVIFEAVAPETVGSTAVVALVC--SSHIIVANCGDSRAVLCRGKEPMVLSVDHKP--NREDEYARIEASGGKV 415 (544)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~GSTavvalI~--~~~L~vANVGDSRa~L~R~g~~~~LS~DH~~--~~~~E~~RI~~~gg~v 415 (544)
..+.-++|||+++.+. +++||+||+|||...++|+|++++-|..+.. +.|
T Consensus 162 -------------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~P------------- 215 (330)
T KOG1379|consen 162 -------------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTP------------- 215 (330)
T ss_pred -------------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCc-------------
Confidence 1234478999999998 8999999999999999999999998876532 111
Q ss_pred eeeCCccccccccccccccccccCCCCc---CCCeEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCC
Q 009070 416 IQWNGHRVFGVLAMSRSIGDRYLKPWII---PEPEVVFIPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHG 492 (544)
Q Consensus 416 ~~~~g~Rv~g~LavSRsiGd~~lk~~v~---~~Pdv~~~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~ 492 (544)
+++ +++-..+..++. -..+++.+++.++|- ||||||||||+|.+++|..++.....
T Consensus 216 -----------yQL--s~~p~~~~~~~~d~p~~ad~~~~~v~~GDv-IilATDGlfDNl~e~~Il~il~~~~~------- 274 (330)
T KOG1379|consen 216 -----------YQL--SSPPEGYSSYISDVPDSADVTSFDVQKGDV-IILATDGLFDNLPEKEILSILKGLDA------- 274 (330)
T ss_pred -----------eee--ccCCccccccccCCccccceEEEeccCCCE-EEEecccccccccHHHHHHHHHHhhc-------
Confidence 011 111111111112 234688899999885 89999999999999999999988321
Q ss_pred CCCccccCCCCChHHHHHHHHHHHHHHhc-----------------------CCCCCeEEEEEE
Q 009070 493 APPLVERGKEIDPAAQAAAEYLSMLALQK-----------------------GSKDNISVIVVD 533 (544)
Q Consensus 493 ~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~-----------------------Gs~DNiTVIVV~ 533 (544)
+ ....+|..|++|.+.|.+. |+.|+|||||..
T Consensus 275 ------~---~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 275 ------R---GNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred ------c---ccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 0 1346777888887777643 458999999975
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.76 E-value=1.7e-17 Score=161.47 Aligned_cols=190 Identities=21% Similarity=0.257 Sum_probs=105.6
Q ss_pred eeccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHHHHHhhh
Q 009070 220 VSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIK 299 (544)
Q Consensus 220 ~S~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l~~~~ 299 (544)
.+++|.|..|||++.+... .+..+++|+||+||...++.+++.+++.+.+.+....
T Consensus 3 ~sh~~~~~~nqD~~~~~~~------------------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~ 58 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD------------------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLL 58 (212)
T ss_dssp ----TTSSS--EEEEEE-T------------------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCCCCCCCEEeeeC------------------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcc
Confidence 5789999999999986431 1557779999999999999999999999988876544
Q ss_pred cccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEeCCeEEEEEeCC
Q 009070 300 NNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGD 379 (544)
Q Consensus 300 ~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~~~~L~vANVGD 379 (544)
... ........++.....+...+.... ...........++||++++++.++.++++|+||
T Consensus 59 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD 118 (212)
T PF13672_consen 59 SQE--------SPSSIEALIRAIKKEILSIVRAFQ------------SAKQADLELRDYGTTLLALVIDPDKVYIFNIGD 118 (212)
T ss_dssp CCH--------HHHHHHHHHHHHHHHHHHHH----------------HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS
T ss_pred ccc--------chHHHHHHHHHHHHHHHHHhhhhh------------hhhhccccccccCceEEEEEEECCEEEEEEECC
Confidence 321 000022223322222222110000 000011123457999999999999999999999
Q ss_pred ceEEE-EeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcCCCeEEEEeccCCCe
Q 009070 380 SRAVL-CRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFIPRARDDE 458 (544)
Q Consensus 380 SRa~L-~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~~l~~~D~ 458 (544)
||+|+ .++|++..++.+|+ .+..+ . ++.+..... ....++..+++.+++.
T Consensus 119 ~~i~~~~~~g~~~~l~~~~~----~~~~~---~------------------~~~~~~~~~----~~~~~~~~~~~~~~d~ 169 (212)
T PF13672_consen 119 SRIYVIRRNGEIQQLTDDHS----GEYPN---Q------------------TRSLTGDDP----EPDVQYGSIPLEEGDV 169 (212)
T ss_dssp -EEEEEEETTEEEE-S---B----HHHHH---C------------------TTSCCHHCC----CTETEEEEEE--TT-E
T ss_pred CeEEEEECCCEEEEcCCCcc----chhhh---h------------------hhccCcccc----ccCCeEEEEEcCCCCE
Confidence 99965 58999999999996 11111 0 122222210 1123566677777776
Q ss_pred EEEEecCCCCCCCCHHH-HHHHHHhh
Q 009070 459 CLILASDGLWDVMTNEE-ACEVARKR 483 (544)
Q Consensus 459 fLILaSDGLwD~ls~~E-I~~ii~~~ 483 (544)
|+|||||||+.+...+ +..++.+.
T Consensus 170 -ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 170 -ILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp -EEEE-HHHHTTS-HHHHHHHH----
T ss_pred -EEEECcCccccCCCHHHHHHHhhhc
Confidence 7799999999998665 66666663
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.65 E-value=1.2e-14 Score=139.40 Aligned_cols=161 Identities=19% Similarity=0.127 Sum_probs=118.6
Q ss_pred cceEEEEEcCCCCChHHHHHHHHHHHHHHHHHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCC
Q 009070 264 TSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDG 343 (544)
Q Consensus 264 ~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~ 343 (544)
+..+|+|+||||+...|.+++..+...+.+.+... ..+.+.+.++|+.+....
T Consensus 29 ~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~------------------~~~~~~l~~~n~~l~~~~--------- 81 (193)
T smart00331 29 GRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG------------------ISLSQILERLNRAIYENG--------- 81 (193)
T ss_pred CeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC------------------CCHHHHHHHHHHHHHhcC---------
Confidence 46899999999999999999999999887764321 123445556666665431
Q ss_pred CchhhhhhccCCCCCcccEEEEEE--eCCeEEEEEeCCceEEEEe-CCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCC
Q 009070 344 DASEVIFEAVAPETVGSTAVVALV--CSSHIIVANCGDSRAVLCR-GKEPMVLSVDHKPNREDEYARIEASGGKVIQWNG 420 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~GSTavvalI--~~~~L~vANVGDSRa~L~R-~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g 420 (544)
...+|+|++++++ ..++++++|+||+|+|+++ ++...+++.+..
T Consensus 82 -----------~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~---------------------- 128 (193)
T smart00331 82 -----------EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG---------------------- 128 (193)
T ss_pred -----------CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC----------------------
Confidence 1347999999998 5789999999999999998 666666655421
Q ss_pred ccccccccccccccccccCCCCcCCCeEEEEeccCCCeEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccCCCCCccccC
Q 009070 421 HRVFGVLAMSRSIGDRYLKPWIIPEPEVVFIPRARDDECLILASDGLWDVMTNEEACEVARKRILLWHKKHGAPPLVERG 500 (544)
Q Consensus 421 ~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~~l~~~D~fLILaSDGLwD~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~ 500 (544)
+.+|... ..+++...+++.++|. |+|+|||||+.+..+++.+++++..
T Consensus 129 ----------~~lG~~~-----~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~l~~~l~~~~---------------- 176 (193)
T smart00331 129 ----------APLGLEP-----DVEVDVRELTLEPGDL-LLLYTDGLTEARNPERLEELLEELL---------------- 176 (193)
T ss_pred ----------ceeeeCC-----CCcceeEEEeeCCCCE-EEEECCCccccCChHHHHHHHHHhc----------------
Confidence 3445433 1336677888888886 7899999999999999999988742
Q ss_pred CCCChHHHHHHHHHHHHHH
Q 009070 501 KEIDPAAQAAAEYLSMLAL 519 (544)
Q Consensus 501 ~~~~~~~q~aAe~Lv~~Al 519 (544)
...++.+++++.+.+.
T Consensus 177 ---~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 177 ---GSPPAEIAQRILEELL 192 (193)
T ss_pred ---CCCHHHHHHHHHHHHh
Confidence 2457778888777654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.42 E-value=1.1e-11 Score=142.45 Aligned_cols=201 Identities=17% Similarity=0.147 Sum_probs=138.7
Q ss_pred ceEEEee-ccCCCCCCCceEEEcccccccchhhccccccccCcccccCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHH
Q 009070 215 PLWGSVS-IRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAE 293 (544)
Q Consensus 215 ~~~G~~S-~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~L~~ 293 (544)
..+|.+. .++.+..+.|.|.+.+. ..+..+++|+||+|....|..++..+.+.+.+
T Consensus 552 ~~~g~a~~~k~g~~vsGD~y~~~~l-----------------------~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~ 608 (764)
T TIGR02865 552 VSTGVARAAKDGELVSGDSYSFGKL-----------------------SAGKYAVAISDGMGSGPEAAQESSACVRLLEK 608 (764)
T ss_pred ehhhHHHhcCCCCcccCceEEEEEE-----------------------CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHH
Confidence 3444443 34557888999877531 11457899999999777777888888887765
Q ss_pred HHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCCCchhhhhhccCCCCCcccEEEEEEe--CCe
Q 009070 294 EIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVC--SSH 371 (544)
Q Consensus 294 ~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSTavvalI~--~~~ 371 (544)
.+.. .+ . . ..++..+|..+.... ...+.+|+.+++++ .++
T Consensus 609 ~~~~---g~--------~---~----~~ai~~lN~~L~~~~--------------------~~~~faTl~l~~IDl~~g~ 650 (764)
T TIGR02865 609 FLES---GF--------D---R----EVAIKTVNSILSLRS--------------------TDEKFSTLDLSVIDLYTGQ 650 (764)
T ss_pred HHHc---CC--------C---H----HHHHHHHHHHHHhCC--------------------CCCeEEEEEEEEEECCCCe
Confidence 5421 11 0 1 334455666554221 12368999999885 689
Q ss_pred EEEEEeCCceEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCeeeeeCCccccccccccccccccccCCCCcCCCeEEEE
Q 009070 372 IIVANCGDSRAVLCRGKEPMVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFI 451 (544)
Q Consensus 372 L~vANVGDSRa~L~R~g~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~ 451 (544)
+.++|+|+++.|+.|+++..+++..+-| +|-.. ..+++....
T Consensus 651 ~~~~~aG~~p~~i~r~~~v~~i~s~~lP---------------------------------lGil~-----~~~~~~~~~ 692 (764)
T TIGR02865 651 AEFVKVGAVPSFIKRGAKVEVIRSSNLP---------------------------------IGILD-----EVDVELVRK 692 (764)
T ss_pred EEEEecCCCceEEEECCEEEEecCCCce---------------------------------eEecc-----CCccceEEE
Confidence 9999999999999999988888653322 12111 134667778
Q ss_pred eccCCCeEEEEecCCCCCCCCHHH-----HHHHHHhhhhhhcccCCCCCccccCCCCChHHHHHHHHHHHHHHhcC---C
Q 009070 452 PRARDDECLILASDGLWDVMTNEE-----ACEVARKRILLWHKKHGAPPLVERGKEIDPAAQAAAEYLSMLALQKG---S 523 (544)
Q Consensus 452 ~l~~~D~fLILaSDGLwD~ls~~E-----I~~ii~~~l~~~~~~~~~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~G---s 523 (544)
++.++|. |+|+|||+||...+.+ +.+++++. ...+|+++++.|++.+++.. .
T Consensus 693 ~L~~GD~-Lll~SDGv~E~~~~~~~~~~~l~~~l~~~-------------------~~~~p~ela~~Il~~a~~~~~~~~ 752 (764)
T TIGR02865 693 KLKNGDL-IVMVSDGVLEGEKEVEGKVLWLVRKLKET-------------------NTNDPEEIAEYLLEKAKELRSGKI 752 (764)
T ss_pred EeCCCCE-EEEECCCCCcCCcccccHHHHHHHHHHhc-------------------CCCCHHHHHHHHHHHHHHhcCCCC
Confidence 8888885 8899999999887543 55555441 03468899999999998653 3
Q ss_pred CCCeEEEEEEe
Q 009070 524 KDNISVIVVDL 534 (544)
Q Consensus 524 ~DNiTVIVV~L 534 (544)
.||+|++++++
T Consensus 753 ~DD~Tvlvirv 763 (764)
T TIGR02865 753 KDDMTVIVAKV 763 (764)
T ss_pred CCCeEEEEEEe
Confidence 79999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.23 E-value=2.4e-09 Score=102.30 Aligned_cols=177 Identities=18% Similarity=0.150 Sum_probs=113.3
Q ss_pred cceEEEEEcCCCCChHHHHHHHHHHHHHHHHHHhhhcccCccccccchhhHHHHHHHHHHHHhhHHhhcccccccCCCCC
Q 009070 264 TSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDG 343 (544)
Q Consensus 264 ~~~lfgV~DGhGG~~~a~~as~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~el~~~~~~~~~~~~~ 343 (544)
+.+++.|+|++|-.-.|.+.+..+...+......... ....+..+|+.+....
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~------------------p~~~l~~ln~~l~~~~--------- 55 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD------------------PEELLEALNRRLYRDL--------- 55 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS------------------HHHHHHHHHHHHHHHT---------
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC------------------HHHHHHHHHHHHHHHh---------
Confidence 5689999999997767777777777777766432111 2333444555553322
Q ss_pred CchhhhhhccCCCCCcccEEEEEEe--CCeEEEEEeCCceEEEEeCC--eeEEcCCCCCCCCHHHHHHHHHcCCeeeeeC
Q 009070 344 DASEVIFEAVAPETVGSTAVVALVC--SSHIIVANCGDSRAVLCRGK--EPMVLSVDHKPNREDEYARIEASGGKVIQWN 419 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~GSTavvalI~--~~~L~vANVGDSRa~L~R~g--~~~~LS~DH~~~~~~E~~RI~~~gg~v~~~~ 419 (544)
......+|++++++. .+.++++|+|+++++++|.+ ....+.....
T Consensus 56 ----------~~~~~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~--------------------- 104 (193)
T PF07228_consen 56 ----------KGDNRYATACYAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEGP--------------------- 104 (193)
T ss_dssp ----------TTTSTTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSSB---------------------
T ss_pred ----------hhccccceEEEEEecccceEEEEeCCCCCCEEEEeccccceeecccCcc---------------------
Confidence 001267888888876 57899999999999999983 3333332111
Q ss_pred CccccccccccccccccccCCCCcCCCeEEEEeccCCCeEEEEecCCCCCCCCHHH-------HHHHHHhhhhhhcccCC
Q 009070 420 GHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFIPRARDDECLILASDGLWDVMTNEE-------ACEVARKRILLWHKKHG 492 (544)
Q Consensus 420 g~Rv~g~LavSRsiGd~~lk~~v~~~Pdv~~~~l~~~D~fLILaSDGLwD~ls~~E-------I~~ii~~~l~~~~~~~~ 492 (544)
.+|... ...+....+++.++|. |+|+||||+|....+. +.+++.+.
T Consensus 105 ------------~lG~~~-----~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--------- 157 (193)
T PF07228_consen 105 ------------PLGIFE-----DIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDEN--------- 157 (193)
T ss_dssp ------------BCSSSC-----TTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCH---------
T ss_pred ------------ceeeec-----cccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhc---------
Confidence 122211 1345566778888886 8899999999985443 34444431
Q ss_pred CCCccccCCCCChHHHHHHHHHHHHHHhc---CCCCCeEEEEEEec
Q 009070 493 APPLVERGKEIDPAAQAAAEYLSMLALQK---GSKDNISVIVVDLK 535 (544)
Q Consensus 493 ~~~~~~~~~~~~~~~q~aAe~Lv~~Al~~---Gs~DNiTVIVV~L~ 535 (544)
...+++++++.|.+.+.+. ...||+|+++++++
T Consensus 158 ----------~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 158 ----------RGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp ----------TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred ----------cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 0346888999999988873 36799999999873
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=97.58 E-value=0.0053 Score=65.27 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=81.3
Q ss_pred CcccEEEEEEe--CCeEEEEEeCCceEEEEeCCee---EEcCCCCCCCCHHHHHHHHHcCCeeeeeCCcccccccccccc
Q 009070 358 VGSTAVVALVC--SSHIIVANCGDSRAVLCRGKEP---MVLSVDHKPNREDEYARIEASGGKVIQWNGHRVFGVLAMSRS 432 (544)
Q Consensus 358 ~GSTavvalI~--~~~L~vANVGDSRa~L~R~g~~---~~LS~DH~~~~~~E~~RI~~~gg~v~~~~g~Rv~g~LavSRs 432 (544)
+=+|+...+++ .+.+.++|+|---+++++.+.. ..|.. ..+.
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~---------------------------------~g~p 277 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTA---------------------------------LGLP 277 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccC---------------------------------CCce
Confidence 66788888776 5789999999999999886542 22221 1133
Q ss_pred ccccccCCCCcCCCeEEEEeccCCCeEEEEecCCCCC-------CCCHHHHHHHHHhhhhhhcccCCCCCccccCCCCCh
Q 009070 433 IGDRYLKPWIIPEPEVVFIPRARDDECLILASDGLWD-------VMTNEEACEVARKRILLWHKKHGAPPLVERGKEIDP 505 (544)
Q Consensus 433 iGd~~lk~~v~~~Pdv~~~~l~~~D~fLILaSDGLwD-------~ls~~EI~~ii~~~l~~~~~~~~~~~~~~~~~~~~~ 505 (544)
+|... -..+.+....+.++| .++|.|||+.+ .+..+...+++.+.. ..
T Consensus 278 iG~~~-----~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~-------------------~~ 332 (367)
T COG2208 278 IGLLP-----DYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRLL-------------------GQ 332 (367)
T ss_pred eeecC-----CccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHHh-------------------CC
Confidence 34332 133556677778866 59999999998 566677777777521 34
Q ss_pred HHHHHHHHHHHHHHhc----CCCCCeEEEEEEec
Q 009070 506 AAQAAAEYLSMLALQK----GSKDNISVIVVDLK 535 (544)
Q Consensus 506 ~~q~aAe~Lv~~Al~~----Gs~DNiTVIVV~L~ 535 (544)
.++++++.+.+...+. ...||+|+++++++
T Consensus 333 ~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 333 PAEEILEAILESLEELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred CHHHHHHHHHHHHHHhhCCccccCceEEEEEEec
Confidence 5667777776665542 23688999999875
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=33.40 E-value=3e+02 Score=28.22 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=23.3
Q ss_pred ccEEEEEEe--CCeEEEEEeCCceEEEEeCCee
Q 009070 360 STAVVALVC--SSHIIVANCGDSRAVLCRGKEP 390 (544)
Q Consensus 360 STavvalI~--~~~L~vANVGDSRa~L~R~g~~ 390 (544)
-|++.++++ .+++.++|.|-...++..+++.
T Consensus 227 ~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 227 FPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred eeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 578877776 4689999999999885444444
Done!