Your job contains 1 sequence.
>009072
MQISLSFEKFDEVLNGSKVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNV
EHFLTPSRFEGLVNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEG
LVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV
LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF
VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVL
TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ
IDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDE
TLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVL
DFLHENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLGGMLFVSQSSGEWTNLLCKK
RRSC
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009072
(544 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156952 - symbol:ATRAD17 "RADIATION SENSITIVE ... 1022 3.7e-103 1
UNIPROTKB|F1NTX9 - symbol:RAD17 "Uncharacterized protein"... 274 3.3e-28 3
UNIPROTKB|F1NC53 - symbol:RAD17 "Uncharacterized protein"... 274 3.3e-28 3
DICTYBASE|DDB_G0292504 - symbol:rad17 "Checkpoint protein... 243 6.8e-23 2
RGD|1309515 - symbol:Rad17 "RAD17 homolog (S. pombe)" spe... 288 2.7e-22 1
UNIPROTKB|E9PTL1 - symbol:Rad17 "Protein Rad17" species:1... 288 2.7e-22 1
FB|FBgn0025808 - symbol:Rad17 "Rad17" species:7227 "Droso... 277 2.5e-21 2
ZFIN|ZDB-GENE-040718-409 - symbol:rad17 "RAD17 homolog (S... 271 2.0e-20 1
UNIPROTKB|I3L290 - symbol:RAD17 "Cell cycle checkpoint pr... 267 5.9e-20 1
UNIPROTKB|O75943 - symbol:RAD17 "Cell cycle checkpoint pr... 267 5.9e-20 1
MGI|MGI:1333807 - symbol:Rad17 "RAD17 homolog (S. pombe)"... 267 6.0e-20 1
UNIPROTKB|E2R410 - symbol:RAD17 "Uncharacterized protein"... 256 9.7e-19 1
UNIPROTKB|E1BPL7 - symbol:RAD17 "Uncharacterized protein"... 253 2.1e-18 1
UNIPROTKB|I3LTZ5 - symbol:LOC100624938 "Uncharacterized p... 248 5.7e-18 1
POMBASE|SPAC14C4.13 - symbol:rad17 "RFC related checkpoin... 204 4.0e-15 3
UNIPROTKB|I3L4H4 - symbol:RAD17 "Cell cycle checkpoint pr... 216 1.9e-14 1
UNIPROTKB|D6RAW6 - symbol:RAD17 "Cell cycle checkpoint pr... 181 4.1e-13 1
UNIPROTKB|F1SKR7 - symbol:LOC100515763 "Uncharacterized p... 202 6.8e-13 1
ASPGD|ASPL0000045765 - symbol:AN8876 species:162425 "Emer... 167 8.4e-12 2
UNIPROTKB|I3L3D2 - symbol:RAD17 "Cell cycle checkpoint pr... 150 2.7e-07 1
ZFIN|ZDB-GENE-040824-3 - symbol:rfc4 "replication factor ... 96 9.8e-07 2
SGD|S000000975 - symbol:RAD24 "Checkpoint protein" specie... 137 3.2e-05 2
UNIPROTKB|Q29RS9 - symbol:RFC4 "Uncharacterized protein" ... 87 0.00056 2
>TAIR|locus:2156952 [details] [associations]
symbol:ATRAD17 "RADIATION SENSITIVE 17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006282 "regulation of
DNA repair" evidence=IMP] [GO:0006259 "DNA metabolic process"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0007126 "meiosis" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR004582 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006281 GO:GO:0007049
EMBL:AB011474 eggNOG:COG0470 GO:GO:0006282 UniGene:At.24248
EMBL:AB030250 IPI:IPI00543337 RefSeq:NP_201414.1 UniGene:At.467
ProteinModelPortal:Q9MBA3 SMR:Q9MBA3 STRING:Q9MBA3 PaxDb:Q9MBA3
PRIDE:Q9MBA3 EnsemblPlants:AT5G66130.1 GeneID:836745
KEGG:ath:AT5G66130 GeneFarm:4452 TAIR:At5g66130
HOGENOM:HOG000006290 InParanoid:Q9MBA3 KO:K06662 OMA:DFLHENV
PhylomeDB:Q9MBA3 ProtClustDB:CLSN2686673 Genevestigator:Q9MBA3
GermOnline:AT5G66130 PANTHER:PTHR12172 Uniprot:Q9MBA3
Length = 599
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 228/460 (49%), Positives = 293/460 (63%)
Query: 44 KYKLCSLEEPDVQKKNVEHFLTPSRFEGLVNPKRDLALGSSSRQQLWTNKNKPCSLEEHA 103
K KL SLE+ D + + L SR P+ ++ R + + +E +
Sbjct: 3 KKKL-SLEDEDDDRS---YNLRSSRSNAKSKPRSSAGTATNPRASKRARLSGASATQEDS 58
Query: 104 IQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRA 163
+ + R E L S S LW +KY+PR+LEEL+V +KKV+EV+
Sbjct: 59 SLVDKI-RLSFEDFDEALSGFKVSSGYERSKNTDLWVDKYRPRTLEELSVHKKKVDEVKL 117
Query: 164 WFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN 223
WF+E L K+ NVL++TGQAGVGK+AT+ I S LG ++EW+ P PTIWQE++HN
Sbjct: 118 WFQESLDFLKNGLRNNVLLVTGQAGVGKSATIHLITSILGVTVHEWNAPIPTIWQEHVHN 177
Query: 224 CKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ 283
+GL+YTSKLDEFENFVE R+YG + S K+ +LLIDDLP+ NGR AFERL+
Sbjct: 178 TSSGLKYTSKLDEFENFVESTRKYGVMASSSTDGIKAPVVLLIDDLPLANGRHAFERLQN 237
Query: 284 CLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKR 343
CLLLLV+ST IPT +++T+ ADS D TA+ E+ QS L AGA KVA NPIT SIK+
Sbjct: 238 CLLLLVKSTQIPTVILITDHNNADSSDQTARRMEDTQSSLERAGALKVAFNPITKNSIKK 297
Query: 344 TLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
L +ICR+E ++T +ID +A ASGGDIR AITSLQ S+K P LN + I P P
Sbjct: 298 VLQRICREEHCKVTTMEIDQMATASGGDIRHAITSLQLFSVK--PELNHT-KIKSPR-PG 353
Query: 404 EKADGHG-----------GFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK 452
+ + HG G S FGRDETLSLFHALGKFLHNKRETDN++ + + +V
Sbjct: 354 MEDNYHGNEQTMYSGLDSGISSCFGRDETLSLFHALGKFLHNKRETDNVIISECSSSLVH 413
Query: 453 DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIM 492
D+F+RLPLKMDAPEKVLSQAHGQA V+DFLHEN LD +
Sbjct: 414 DEFARLPLKMDAPEKVLSQAHGQAGRVVDFLHENV-LDFV 452
>UNIPROTKB|F1NTX9 [details] [associations]
symbol:RAD17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR004582 InterPro:IPR018324 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 PANTHER:PTHR12172 TIGRFAMs:TIGR00602
GeneTree:ENSGT00440000039046 EMBL:AADN02074379 IPI:IPI00819456
Ensembl:ENSGALT00000037640 ArrayExpress:F1NTX9 Uniprot:F1NTX9
Length = 693
Score = 274 (101.5 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 75/263 (28%), Positives = 131/263 (49%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + +LAVQ+KK+EEV W + + + K VL++TG AG GKTATV+ +
Sbjct: 97 WVDKYKPETQNDLAVQKKKIEEVETWLKMHIFQRQPKQDGCVLLLTGPAGCGKTATVQIL 156
Query: 199 ASHLGARLYEWDTPTPTIW-QEYMHNCK----TGLEYTSKLDE--FENFVERIRRYGSTS 251
A LG ++ +W P + +E + N + S+ F++F+ R +Y
Sbjct: 157 AKDLGVQVQDWTNPISLDFTKEDLRNISGHNSNSHTFPSQAQAALFQDFLLRANKYNKLQ 216
Query: 252 PSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
+ GES + ++LI+D+P R L + L VR++ P ++++ DS
Sbjct: 217 --MLGESSENDKKLILIEDMPNQFYRDP-SSLHEILRRFVRTSRCPLIFIISDNFSGDSN 273
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC-------RQEQYSLSTEQID 362
E L+ + + ++ P+ ++ + L++I R++ Y+ ++
Sbjct: 274 QRLLFPKEILEELCISI----ISFKPVAPTNMMKVLNRIATAEANMNREKNYAPDRASLE 329
Query: 363 LVAQASGGDIRQAITSLQFSSLK 385
L+ + GDIR AI SLQF S+K
Sbjct: 330 LLCKGCSGDIRSAINSLQFFSMK 352
Score = 104 (41.7 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 350 RQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLK-------------QDPMLNLSLSI 396
R++ Y+ ++L+ + GDIR AI SLQF S+K + L +
Sbjct: 317 REKNYAPDRASLELLCKGCSGDIRSAINSLQFFSMKDCSLEKDFWSRKKRSSTLKSETAA 376
Query: 397 SKPNFPEE-KADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQ-DAFVVK 452
+ + ++ K+D +IQ G+D ++ LFHALGK ++ KRE + + Q + +++
Sbjct: 377 AMCSLRKKSKSDISEDQAIQAIGGKDASIFLFHALGKIIYCKREPLSESEFPQLPSHLLE 436
Query: 453 DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
L + PE ++ ++H +LH+N
Sbjct: 437 HHRDTLLIH---PEDIVEKSHMSGSMFNLYLHQN 467
Score = 51 (23.0 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 41 WTDKYKLCSLEEPDVQKKNVEHFLT 65
W DKYK + + VQKK +E T
Sbjct: 97 WVDKYKPETQNDLAVQKKKIEEVET 121
Score = 42 (19.8 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 90 WTNKNKPCSLEEHAIQKENV 109
W +K KP + + A+QK+ +
Sbjct: 97 WVDKYKPETQNDLAVQKKKI 116
>UNIPROTKB|F1NC53 [details] [associations]
symbol:RAD17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077 "DNA
damage checkpoint" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0008156 "negative regulation of DNA replication" evidence=IEA]
[GO:0042325 "regulation of phosphorylation" evidence=IEA]
InterPro:IPR004582 InterPro:IPR018324 GO:GO:0005634 GO:GO:0000077
GO:GO:0042325 GO:GO:0006281 GO:GO:0007093 GO:GO:0000781
GO:GO:0008156 PANTHER:PTHR12172 OMA:NYIDFFM TIGRFAMs:TIGR00602
GeneTree:ENSGT00440000039046 EMBL:AADN02074379 IPI:IPI00583330
Ensembl:ENSGALT00000025104 ArrayExpress:F1NC53 Uniprot:F1NC53
Length = 694
Score = 274 (101.5 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 75/263 (28%), Positives = 131/263 (49%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + +LAVQ+KK+EEV W + + + K VL++TG AG GKTATV+ +
Sbjct: 98 WVDKYKPETQNDLAVQKKKIEEVETWLKMHIFQRQPKQDGCVLLLTGPAGCGKTATVQIL 157
Query: 199 ASHLGARLYEWDTPTPTIW-QEYMHNCK----TGLEYTSKLDE--FENFVERIRRYGSTS 251
A LG ++ +W P + +E + N + S+ F++F+ R +Y
Sbjct: 158 AKDLGVQVQDWTNPISLDFTKEDLRNISGHNSNSHTFPSQAQAALFQDFLLRANKYNKLQ 217
Query: 252 PSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
+ GES + ++LI+D+P R L + L VR++ P ++++ DS
Sbjct: 218 --MLGESSENDKKLILIEDMPNQFYRDP-SSLHEILRRFVRTSRCPLIFIISDNFSGDSN 274
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC-------RQEQYSLSTEQID 362
E L+ + + ++ P+ ++ + L++I R++ Y+ ++
Sbjct: 275 QRLLFPKEILEELCISI----ISFKPVAPTNMMKVLNRIATAEANMNREKNYAPDRASLE 330
Query: 363 LVAQASGGDIRQAITSLQFSSLK 385
L+ + GDIR AI SLQF S+K
Sbjct: 331 LLCKGCSGDIRSAINSLQFFSMK 353
Score = 104 (41.7 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 350 RQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLK-------------QDPMLNLSLSI 396
R++ Y+ ++L+ + GDIR AI SLQF S+K + L +
Sbjct: 318 REKNYAPDRASLELLCKGCSGDIRSAINSLQFFSMKDCSLEKDFWSRKKRSSTLKSETAA 377
Query: 397 SKPNFPEE-KADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQ-DAFVVK 452
+ + ++ K+D +IQ G+D ++ LFHALGK ++ KRE + + Q + +++
Sbjct: 378 AMCSLRKKSKSDISEDQAIQAIGGKDASIFLFHALGKIIYCKREPLSESEFPQLPSHLLE 437
Query: 453 DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
L + PE ++ ++H +LH+N
Sbjct: 438 HHRDTLLIH---PEDIVEKSHMSGSMFNLYLHQN 468
Score = 51 (23.0 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 41 WTDKYKLCSLEEPDVQKKNVEHFLT 65
W DKYK + + VQKK +E T
Sbjct: 98 WVDKYKPETQNDLAVQKKKIEEVET 122
Score = 42 (19.8 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 90 WTNKNKPCSLEEHAIQKENV 109
W +K KP + + A+QK+ +
Sbjct: 98 WVDKYKPETQNDLAVQKKKI 117
>DICTYBASE|DDB_G0292504 [details] [associations]
symbol:rad17 "Checkpoint protein RAD24" species:44689
"Dictyostelium discoideum" [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031389 "Rad17 RFC-like complex" evidence=ISS]
[GO:0003689 "DNA clamp loader activity" evidence=ISS] [GO:0000077
"DNA damage checkpoint" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] InterPro:IPR004582 dictyBase:DDB_G0292504
GO:GO:0005634 GO:GO:0000077 GenomeReviews:CM000155_GR GO:GO:0006281
GO:GO:0007049 EMBL:AAFI02000190 eggNOG:COG0470 GO:GO:0000076
GO:GO:0003689 KO:K06662 PANTHER:PTHR12172 GO:GO:0031389
RefSeq:XP_629662.1 ProteinModelPortal:Q54D34
EnsemblProtists:DDB0233002 GeneID:8628726 KEGG:ddi:DDB_G0292504
InParanoid:Q54D34 OMA:FIKPRIN Uniprot:Q54D34
Length = 1191
Score = 243 (90.6 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 75/285 (26%), Positives = 141/285 (49%)
Query: 123 NPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGD--SKDKFSTNV 180
N +D++ ++ +++ +K+ PRS +L V +K+++ V+ W + R + + +
Sbjct: 525 NNKNDNSENIDNSDKMFVDKHFPRSESDLVVHKKRIDMVKIWLQSRFKELSTNQPIEQKL 584
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
L +TG GVGK++ +R ++ + + EW P+ + ++ + T Y+S L+EF+ +
Sbjct: 585 LFLTGPTGVGKSSLIRVLSKSMEFDIEEWINPSIVLTRDMNDSLST--PYSSTLEEFKKW 642
Query: 241 VERIRRYGSTSPSI--PGESKSSAILLIDDLP-VT-NGRTAFERLRQCLLLLVRSTHIPT 296
+ ++ SI G + + IL +++ P VT + R F + L S+ P
Sbjct: 643 L----KFNGQGFSIFGNGNNNNKKILFVEEFPNVTLDNRIDFVETFENFL---HSSRYPL 695
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS- 355
+L++ +S S Q F + + + NPI + +TL KI E YS
Sbjct: 696 IFILSDTFSGNS--SLYQLFPS-SFLNNNPQILHINFNPIAPTQLLKTLEKITYLEGYSH 752
Query: 356 -LSTEQIDLVAQASGGDIRQAITSLQFSSL-KQDPMLNLSLSISK 398
+S+ Q+ +A S GDIR AI SL+F + K ++N S +I K
Sbjct: 753 SISSVQLKSIADESAGDIRAAIHSLEFYCVGKNHKLINKSTTIPK 797
Score = 106 (42.4 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 408 GHGGFS--IQFGRDETLSLFHALGKFLHNKRETD-NLVKMDQDAFVVKDKFSRLPLKMDA 464
G G S I RD ++LFH++GK L+NKR +D N K + + K K+ R L +
Sbjct: 830 GGSGSSRGITRNRDSIITLFHSVGKILYNKRISDSNPYKPESTWY--KQKYHR-QLPENV 886
Query: 465 PEKVLSQAHGQARPVLDFLHEN 486
E+V +H L F+HEN
Sbjct: 887 VEEVFENSHMDFNTFLHFIHEN 908
>RGD|1309515 [details] [associations]
symbol:Rad17 "RAD17 homolog (S. pombe)" species:10116 "Rattus
norvegicus" [GO:0000077 "DNA damage checkpoint" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISO] [GO:0008156 "negative regulation of DNA
replication" evidence=ISO] [GO:0042325 "regulation of
phosphorylation" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=ISO] InterPro:IPR003593 InterPro:IPR004582
InterPro:IPR018324 SMART:SM00382 RGD:1309515 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 GO:GO:0007049 GO:GO:0017111
eggNOG:COG0470 KO:K06662 PANTHER:PTHR12172 CTD:5884
HOVERGEN:HBG059834 OrthoDB:EOG4229J6 TIGRFAMs:TIGR00602
HOGENOM:HOG000013176 IPI:IPI00360297 EMBL:BC098057
RefSeq:NP_001019949.1 UniGene:Rn.154275 ProteinModelPortal:Q4V7A2
STRING:Q4V7A2 GeneID:310034 KEGG:rno:310034 UCSC:RGD:1309515
InParanoid:Q4V7A2 NextBio:661568 Genevestigator:Q4V7A2
Uniprot:Q4V7A2
Length = 686
Score = 288 (106.4 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 92/322 (28%), Positives = 156/322 (48%)
Query: 79 LALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQL 138
L+L +SS ++ K P +LE + + GR L + GL +++ S +
Sbjct: 40 LSLNNSSHRR----KYLPSTLESNRLSARKRGR-LPLEQTNGL-----ETSKEYLSDDEP 89
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + ELAV +KK+EEV W + ++ + K K ++L+ITG G GKT T++ +
Sbjct: 90 WVDKYKPETQHELAVHKKKIEEVETWLKTQVLEVKPKHGGSILLITGPPGCGKTTTIKIL 149
Query: 199 ASHLGARLYEWDTPTPTIWQ--EY--MHNCKTG---LEYTSKLDEFENFVERIRRYGSTS 251
+ LG ++ EW P +Q +Y + N ++ + Y S++ F +F+ R +Y
Sbjct: 150 SKELGIQVQEWVNPILQDFQKDDYKELFNSESNFSVIPYQSQIAVFNDFLLRATKYNKLQ 209
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+ I+L++DLP R A L + L V P ++++ DS +
Sbjct: 210 MLGDALTTDKKIILVEDLPNQFYRDA-NALHEILRKYVHIGRCPLVFIVSDSVSGDS--N 266
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--------DL 363
F + +I + ++ NP+ + + L++I E S + E+I +L
Sbjct: 267 HRLLFPK--NIQEECSVSNISFNPVAPTIMMKFLNRIVTIEA-SKNGEKITVPNKASLEL 323
Query: 364 VAQASGGDIRQAITSLQFSSLK 385
+ Q GDIR AI SLQFSS K
Sbjct: 324 LCQGCSGDIRSAINSLQFSSSK 345
Score = 131 (51.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 71/281 (25%), Positives = 120/281 (42%)
Query: 228 LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL 287
+ Y S++ F +F+ R +Y + I+L++DLP R A L + L
Sbjct: 186 IPYQSQIAVFNDFLLRATKYNKLQMLGDALTTDKKIILVEDLPNQFYRDA-NALHEILRK 244
Query: 288 LVRSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVALNPITNGSIK 342
V P ++++ DS ++ +E + +I + A + + N +
Sbjct: 245 YVHIGRCPLVFIVSDSVSGDSNHRLLFPKNIQEECSVSNISFNPVAPTIMMK-FLNRIVT 303
Query: 343 RTLSKICRQEQYSLSTE-QIDLVAQASGGDIRQAITSLQFSSLKQD-----PMLNLSL-- 394
SK E+ ++ + ++L+ Q GDIR AI SLQFSS K + +SL
Sbjct: 304 IEASK--NGEKITVPNKASLELLCQGCSGDIRSAINSLQFSSSKGENSSWSKKKKMSLKS 361
Query: 395 --SISKPNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFV 450
SISK + IQ G+D +L LF ALGK L+ KR L ++
Sbjct: 362 DASISKAKQKRKHNSTLENQEIQAIGGKDVSLFLFRALGKILYCKRAP--LTELASPRLP 419
Query: 451 VK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLD 490
+ R L + PE+++ +H +LH+N ++D
Sbjct: 420 AHLSEHDRDTLLVQ-PEEIVEMSHMPGEFFNLYLHQN-YID 458
Score = 55 (24.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 36 STQQLWTDKYKLCSLEEPDVQKKNVEHFLTPSRFEGL-VNPK 76
S + W DKYK + E V KK +E T + + L V PK
Sbjct: 85 SDDEPWVDKYKPETQHELAVHKKKIEEVETWLKTQVLEVKPK 126
>UNIPROTKB|E9PTL1 [details] [associations]
symbol:Rad17 "Protein Rad17" species:10116 "Rattus
norvegicus" [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007093
"mitotic cell cycle checkpoint" evidence=IEA] [GO:0008156 "negative
regulation of DNA replication" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042325
"regulation of phosphorylation" evidence=IEA] InterPro:IPR003593
InterPro:IPR004582 InterPro:IPR018324 SMART:SM00382 RGD:1309515
GO:GO:0005524 GO:GO:0005634 GO:GO:0000077 GO:GO:0042325
GO:GO:0006281 GO:GO:0017111 GO:GO:0007093 GO:GO:0000781
GO:GO:0008156 PANTHER:PTHR12172 OMA:NYIDFFM TIGRFAMs:TIGR00602
GeneTree:ENSGT00440000039046 IPI:IPI00360297
Ensembl:ENSRNOT00000024801 Uniprot:E9PTL1
Length = 686
Score = 288 (106.4 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 92/322 (28%), Positives = 156/322 (48%)
Query: 79 LALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQL 138
L+L +SS ++ K P +LE + + GR L + GL +++ S +
Sbjct: 40 LSLNNSSHRR----KYLPSTLESNRLSARKRGR-LPLEQTNGL-----ETSKEYLSDDEP 89
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + ELAV +KK+EEV W + ++ + K K ++L+ITG G GKT T++ +
Sbjct: 90 WVDKYKPETQHELAVHKKKIEEVETWLKTQVLEVKPKHGGSILLITGPPGCGKTTTIKIL 149
Query: 199 ASHLGARLYEWDTPTPTIWQ--EY--MHNCKTG---LEYTSKLDEFENFVERIRRYGSTS 251
+ LG ++ EW P +Q +Y + N ++ + Y S++ F +F+ R +Y
Sbjct: 150 SKELGIQVQEWVNPILQDFQKDDYKELFNSESNFSVIPYQSQIAVFNDFLLRATKYNKLQ 209
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+ I+L++DLP R A L + L V P ++++ DS +
Sbjct: 210 MLGDALTTDKKIILVEDLPNQFYRDA-NALHEILRKYVHIGRCPLVFIVSDSVSGDS--N 266
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--------DL 363
F + +I + ++ NP+ + + L++I E S + E+I +L
Sbjct: 267 HRLLFPK--NIQEECSVSNISFNPVAPTIMMKFLNRIVTIEA-SKNGEKITVPNKASLEL 323
Query: 364 VAQASGGDIRQAITSLQFSSLK 385
+ Q GDIR AI SLQFSS K
Sbjct: 324 LCQGCSGDIRSAINSLQFSSSK 345
Score = 131 (51.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 71/281 (25%), Positives = 120/281 (42%)
Query: 228 LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL 287
+ Y S++ F +F+ R +Y + I+L++DLP R A L + L
Sbjct: 186 IPYQSQIAVFNDFLLRATKYNKLQMLGDALTTDKKIILVEDLPNQFYRDA-NALHEILRK 244
Query: 288 LVRSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVALNPITNGSIK 342
V P ++++ DS ++ +E + +I + A + + N +
Sbjct: 245 YVHIGRCPLVFIVSDSVSGDSNHRLLFPKNIQEECSVSNISFNPVAPTIMMK-FLNRIVT 303
Query: 343 RTLSKICRQEQYSLSTE-QIDLVAQASGGDIRQAITSLQFSSLKQD-----PMLNLSL-- 394
SK E+ ++ + ++L+ Q GDIR AI SLQFSS K + +SL
Sbjct: 304 IEASK--NGEKITVPNKASLELLCQGCSGDIRSAINSLQFSSSKGENSSWSKKKKMSLKS 361
Query: 395 --SISKPNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFV 450
SISK + IQ G+D +L LF ALGK L+ KR L ++
Sbjct: 362 DASISKAKQKRKHNSTLENQEIQAIGGKDVSLFLFRALGKILYCKRAP--LTELASPRLP 419
Query: 451 VK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLD 490
+ R L + PE+++ +H +LH+N ++D
Sbjct: 420 AHLSEHDRDTLLVQ-PEEIVEMSHMPGEFFNLYLHQN-YID 458
Score = 55 (24.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 36 STQQLWTDKYKLCSLEEPDVQKKNVEHFLTPSRFEGL-VNPK 76
S + W DKYK + E V KK +E T + + L V PK
Sbjct: 85 SDDEPWVDKYKPETQHELAVHKKKIEEVETWLKTQVLEVKPK 126
>FB|FBgn0025808 [details] [associations]
symbol:Rad17 "Rad17" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR004582 EMBL:AE014297 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 KO:K06662 OMA:DFLHENV PANTHER:PTHR12172 CTD:5884
GeneTree:ENSGT00440000039046 RefSeq:NP_650382.3 UniGene:Dm.1199
ProteinModelPortal:O96532 SMR:O96532 STRING:O96532
EnsemblMetazoa:FBtr0082974 GeneID:41779 KEGG:dme:Dmel_CG7825
UCSC:CG7825-RA FlyBase:FBgn0025808 InParanoid:O96532
OrthoDB:EOG4905R5 PhylomeDB:O96532 GenomeRNAi:41779 NextBio:825540
ArrayExpress:O96532 Bgee:O96532 Uniprot:O96532
Length = 535
Score = 277 (102.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 89/328 (27%), Positives = 152/328 (46%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W K KF + ++T
Sbjct: 75 DADITVPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRK-KFPAQMCLLT 133
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKT T+R +A G +L EW P + + TG Y S L+ F++F+ R
Sbjct: 134 GPTGAGKTTTLRVLAKEFGYQLQEWINPIDCEVVNTLGDQTTGASYVGSHLEAFKSFLLR 193
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L + +S P ++
Sbjct: 194 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEVNFEELLEEYTAYGKS---PLVFIV 245
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-----YS 355
+ K+ ++ + + F + + ++ N I + +++++ C Q Y
Sbjct: 246 ADA-KSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSMKTFCSVMQQNKATYK 302
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLK---QDPMLNLSLSISKPNFPEEKADGHGG 411
+ ST +D + + GDIR A+ +L SSLK P L++S+S K
Sbjct: 303 VPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVSSMPTKQLNVSVSAKG---RKKKMQST 359
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETD 439
GRDE+++L HALG+ L+ K D
Sbjct: 360 LK-SIGRDESITLMHALGRVLNPKFNED 386
Score = 41 (19.5 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 450 VVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
V+ KF+ + +PE++ + + R ++F++ N
Sbjct: 378 VLNPKFNEDKTMLHSPEEITEAFNTEPRNFVNFVYAN 414
>ZFIN|ZDB-GENE-040718-409 [details] [associations]
symbol:rad17 "RAD17 homolog (S. pombe)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004582 InterPro:IPR018324 SMART:SM00382
ZFIN:ZDB-GENE-040718-409 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 GO:GO:0017111 eggNOG:COG0470 PANTHER:PTHR12172
HOVERGEN:HBG059834 OMA:NYIDFFM OrthoDB:EOG4229J6 TIGRFAMs:TIGR00602
GeneTree:ENSGT00440000039046 HOGENOM:HOG000013176 EMBL:BX510923
IPI:IPI00482750 UniGene:Dr.31220 Ensembl:ENSDART00000132950
InParanoid:A2BGQ6 Uniprot:A2BGQ6
Length = 666
Score = 271 (100.5 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 98/343 (28%), Positives = 154/343 (44%)
Query: 73 VNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASAS 132
V P LG SR K P S E +K++ R + P + + S+ A+
Sbjct: 20 VEPSFGELLGGVSRSL----KKGPLSGESKTAEKKSRKRKVDPYVSDNQITV---SSEAN 72
Query: 133 SSTQ-QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
+ Q + W + + P+S ELAV +KKVEEV +W L K K +L++TG +G GK
Sbjct: 73 NPDQDEPWVDIHAPQSQAELAVHKKKVEEVESWLRVHL--DKSKKGGAILLLTGPSGCGK 130
Query: 192 TATVRQIASHLGARLYEWDTPTPT--------IWQEYMHNCKTGLEY-TSKLDEFENFVE 242
TATV+ +A LG ++ EW P+ T Q + + + + +S+ F+ F+
Sbjct: 131 TATVQVLAKELGFQVQEWSNPSTTSQYKTEDLFTQSFDPDSRFNRFHGSSQTGLFQEFLL 190
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
R +Y S ++ I+LI++ P R L L ++ P ++++
Sbjct: 191 RANKYSRLRMSGETWTEDRKIILIEEFPNQFYRQP-GCLHDILRQFIKCGRCPLVLIVS- 248
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE--- 359
DS+ S + +L + G ++ NP+ S+ + LS+I E S
Sbjct: 249 ----DSLSGDKNSRLLFKDVLQELGIHNISFNPVAPTSMMKVLSRIVTIEAVKSSGRISV 304
Query: 360 ----QIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
+DL+ S GDIR AI SLQFSS D L L SK
Sbjct: 305 PDKAALDLLCSGSSGDIRSAINSLQFSSFT-DNSLERRLWASK 346
>UNIPROTKB|I3L290 [details] [associations]
symbol:RAD17 "Cell cycle checkpoint protein RAD17"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004582 InterPro:IPR018324
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 GO:GO:0017111 PANTHER:PTHR12172 TIGRFAMs:TIGR00602
EMBL:AC145145 SMR:I3L290 Ensembl:ENST00000572356
Ensembl:ENST00000575406 Uniprot:I3L290
Length = 681
Score = 267 (99.0 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 85/321 (26%), Positives = 149/321 (46%)
Query: 79 LALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQL 138
L + +SS ++ KN P +LE G + + GL N + S +
Sbjct: 40 LGVNNSSHRR----KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEP 90
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ +
Sbjct: 91 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 150
Query: 199 ASHLGARLYEWDTPTPTIWQEY----MHNCKTGLE---YTSKLDEFENFVERIRRYGSTS 251
+ G ++ EW P +Q+ M N ++ Y S++ F+ F+ R +Y
Sbjct: 151 SKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQ 210
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
I+L++DLP R + L + L VR P ++++ D+ +
Sbjct: 211 MLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN-NQ 268
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE------QYSLSTE-QIDLV 364
+E+Q + ++ NP+ + + L++I E + ++ + ++L+
Sbjct: 269 RLLFPKEIQE---ECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELL 325
Query: 365 AQASGGDIRQAITSLQFSSLK 385
Q GDIR AI SLQFSS K
Sbjct: 326 CQGCSGDIRSAINSLQFSSSK 346
Score = 142 (55.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 75/291 (25%), Positives = 124/291 (42%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 189 YQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 247
Query: 290 RSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVA---LNPITNGSI 341
R P ++++ D+ + +E + +I + A + LN I
Sbjct: 248 RIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEA 307
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS---------------LKQ 386
+ KI ++ SL +L+ Q GDIR AI SLQFSS LK
Sbjct: 308 NKNGGKITVPDKTSL-----ELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKS 362
Query: 387 DPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKM 444
D +L+ S KP+ F ++ GG +D +L LF ALGK L+ KR + L ++
Sbjct: 363 DAVLSKSKRRKKPDRVFENQEVQAIGG------KDVSLFLFRALGKILYCKRAS--LTEL 414
Query: 445 DQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
D ++ R L ++ PE+V+ +H +LH+N ++D +
Sbjct: 415 DSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFNLYLHQN-YIDFFME 463
Score = 51 (23.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 36 STQQLWTDKYKLCSLEEPDVQKKNVEHFLT 65
S + W DKYK + E V KK +E T
Sbjct: 86 SENEPWVDKYKPETQHELAVHKKKIEEVET 115
>UNIPROTKB|O75943 [details] [associations]
symbol:RAD17 "Cell cycle checkpoint protein RAD17"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IMP] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=IMP] [GO:0042325 "regulation of
phosphorylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0008156 "negative regulation of DNA replication"
evidence=IMP] [GO:0000076 "DNA replication checkpoint"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0000781 "chromosome, telomeric
region" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
InterPro:IPR004582 InterPro:IPR018324 SMART:SM00382 GO:GO:0005524
GO:GO:0000077 Reactome:REACT_115566 GO:GO:0005654 GO:GO:0042325
GO:GO:0006260 GO:GO:0006281 GO:GO:0017111 GO:GO:0007093
eggNOG:COG0470 GO:GO:0008156 GO:GO:0000076 EMBL:CH471137 KO:K06662
PANTHER:PTHR12172 EMBL:AF076838 EMBL:AJ004977 EMBL:AF112263
EMBL:AF085736 EMBL:AJ001642 EMBL:AJ131296 EMBL:AJ131297
EMBL:AJ131298 EMBL:AJ131299 EMBL:AJ131300 EMBL:AJ131301
EMBL:AJ131302 EMBL:AJ131303 EMBL:AJ131304 EMBL:AJ131305
EMBL:AJ131306 EMBL:AJ131307 EMBL:AJ131308 EMBL:AF017748
EMBL:AF126424 EMBL:AF098533 EMBL:AF098534 EMBL:AL122068
EMBL:AK292487 EMBL:BX537441 EMBL:AY612854 EMBL:BC032304
IPI:IPI00107491 IPI:IPI00107492 IPI:IPI00334267 IPI:IPI00395702
PIR:T34548 RefSeq:NP_002864.1 RefSeq:NP_579916.1 RefSeq:NP_579917.1
RefSeq:NP_579918.1 RefSeq:NP_579919.1 RefSeq:NP_579920.1
RefSeq:NP_579921.1 RefSeq:NP_579922.1 UniGene:Hs.16184
ProteinModelPortal:O75943 SMR:O75943 DIP:DIP-24254N DIP:DIP-34896N
IntAct:O75943 STRING:O75943 PhosphoSite:O75943 PRIDE:O75943
DNASU:5884 Ensembl:ENST00000282891 Ensembl:ENST00000305138
Ensembl:ENST00000345306 Ensembl:ENST00000354312
Ensembl:ENST00000354868 Ensembl:ENST00000358030
Ensembl:ENST00000361732 Ensembl:ENST00000380774
Ensembl:ENST00000509734 Ensembl:ENST00000521422 GeneID:5884
KEGG:hsa:5884 UCSC:uc003jwg.3 UCSC:uc003jwm.3 UCSC:uc003jwn.3
CTD:5884 GeneCards:GC05P068700 HGNC:HGNC:9807 HPA:CAB004551
HPA:HPA005448 MIM:603139 neXtProt:NX_O75943 PharmGKB:PA34167
HOVERGEN:HBG059834 InParanoid:O75943 OMA:NYIDFFM OrthoDB:EOG4229J6
PhylomeDB:O75943 GenomeRNAi:5884 NextBio:22866 ArrayExpress:O75943
Bgee:O75943 CleanEx:HS_RAD17 Genevestigator:O75943
GermOnline:ENSG00000152942 TIGRFAMs:TIGR00602 Uniprot:O75943
Length = 681
Score = 267 (99.0 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 85/321 (26%), Positives = 149/321 (46%)
Query: 79 LALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQL 138
L + +SS ++ KN P +LE G + + GL N + S +
Sbjct: 40 LGVNNSSHRR----KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEP 90
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ +
Sbjct: 91 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 150
Query: 199 ASHLGARLYEWDTPTPTIWQEY----MHNCKTGLE---YTSKLDEFENFVERIRRYGSTS 251
+ G ++ EW P +Q+ M N ++ Y S++ F+ F+ R +Y
Sbjct: 151 SKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQ 210
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
I+L++DLP R + L + L VR P ++++ D+ +
Sbjct: 211 MLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN-NQ 268
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE------QYSLSTE-QIDLV 364
+E+Q + ++ NP+ + + L++I E + ++ + ++L+
Sbjct: 269 RLLFPKEIQE---ECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELL 325
Query: 365 AQASGGDIRQAITSLQFSSLK 385
Q GDIR AI SLQFSS K
Sbjct: 326 CQGCSGDIRSAINSLQFSSSK 346
Score = 142 (55.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 75/291 (25%), Positives = 124/291 (42%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 189 YQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 247
Query: 290 RSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVA---LNPITNGSI 341
R P ++++ D+ + +E + +I + A + LN I
Sbjct: 248 RIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEA 307
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS---------------LKQ 386
+ KI ++ SL +L+ Q GDIR AI SLQFSS LK
Sbjct: 308 NKNGGKITVPDKTSL-----ELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKS 362
Query: 387 DPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKM 444
D +L+ S KP+ F ++ GG +D +L LF ALGK L+ KR + L ++
Sbjct: 363 DAVLSKSKRRKKPDRVFENQEVQAIGG------KDVSLFLFRALGKILYCKRAS--LTEL 414
Query: 445 DQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
D ++ R L ++ PE+V+ +H +LH+N ++D +
Sbjct: 415 DSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFNLYLHQN-YIDFFME 463
Score = 51 (23.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 36 STQQLWTDKYKLCSLEEPDVQKKNVEHFLT 65
S + W DKYK + E V KK +E T
Sbjct: 86 SENEPWVDKYKPETQHELAVHKKKIEEVET 115
>MGI|MGI:1333807 [details] [associations]
symbol:Rad17 "RAD17 homolog (S. pombe)" species:10090 "Mus
musculus" [GO:0000077 "DNA damage checkpoint" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008156 "negative regulation of DNA replication"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0042325 "regulation of phosphorylation"
evidence=ISO] InterPro:IPR003593 InterPro:IPR004582
InterPro:IPR018324 SMART:SM00382 MGI:MGI:1333807 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0000077 GO:GO:0042325
GO:GO:0006281 GO:GO:0006974 GO:GO:0017111 GO:GO:0007093
eggNOG:COG0470 GO:GO:0000781 GO:GO:0008156 KO:K06662
PANTHER:PTHR12172 CTD:5884 HOVERGEN:HBG059834 OMA:NYIDFFM
OrthoDB:EOG4229J6 TIGRFAMs:TIGR00602 EMBL:AF085737 EMBL:AJ011923
EMBL:BC066855 IPI:IPI00136368 RefSeq:NP_001037836.1
RefSeq:NP_035363.2 UniGene:Mm.248489 ProteinModelPortal:Q6NXW6
SMR:Q6NXW6 DIP:DIP-59315N STRING:Q6NXW6 PhosphoSite:Q6NXW6
PRIDE:Q6NXW6 Ensembl:ENSMUST00000022136 Ensembl:ENSMUST00000177848
GeneID:19356 KEGG:mmu:19356 GeneTree:ENSGT00440000039046
HOGENOM:HOG000013176 InParanoid:Q6NXW6 NextBio:296399 Bgee:Q6NXW6
CleanEx:MM_RAD17 Genevestigator:Q6NXW6
GermOnline:ENSMUSG00000021635 Uniprot:Q6NXW6
Length = 688
Score = 267 (99.0 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 93/350 (26%), Positives = 159/350 (45%)
Query: 53 PDVQKKNVEHFLTPSRFEGLVNPKRDLALGSSSRQQLWTNKNK--PCSLEEHAIQKENVG 110
P V V ++ P+ + N SS +++ K P +LE + + G
Sbjct: 8 PKVSSTKVTDWVAPAFDDFEANTAITTITASSLTFSNSSHRRKYLPSTLESNRLSARKRG 67
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
R L+ + GL +++ S + W +KYKP + ELAV +KK+EEV W + ++
Sbjct: 68 R-LSLEQTHGL-----ETSRERLSDNEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVL 121
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE- 229
+ K K +VL+ITG G GKT T++ ++ LG ++ EW P +Q+ + LE
Sbjct: 122 EVKPKQGGSVLLITGPPGCGKTTTIKILSKELGIQVQEWVNPILPDFQKDDYKELLSLES 181
Query: 230 ------YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ 283
Y S++ F +F+ R +Y + I+L+++LP R L +
Sbjct: 182 NFSVVPYQSQIAVFNDFLLRATKYSKLQMLGDDLTTDKKIILVEELPNQFYRDP-NALHE 240
Query: 284 CLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKR 343
L V+ P ++++ D+ Q ++I + ++ NP+ + +
Sbjct: 241 ILRKHVQIGRCPLVFIVSDSVSGDN----NQRLLFPRNIQEECSVSNISFNPVAPTIMMK 296
Query: 344 TLSKICRQEQYSLSTEQI--------DLVAQASGGDIRQAITSLQFSSLK 385
L++I E S + E+I +L+ Q GDIR AI SLQFSS K
Sbjct: 297 FLNRIVTIEA-SKNGEKIIVPNKTSLELLCQGCSGDIRSAINSLQFSSSK 345
Score = 121 (47.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 71/285 (24%), Positives = 120/285 (42%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F +F+ R +Y + I+L+++LP R L + L V
Sbjct: 188 YQSQIAVFNDFLLRATKYSKLQMLGDDLTTDKKIILVEELPNQFYRDP-NALHEILRKHV 246
Query: 290 RSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVA---LNPITNGSI 341
+ P ++++ D+ ++ +E + +I + A + LN I
Sbjct: 247 QIGRCPLVFIVSDSVSGDNNQRLLFPRNIQEECSVSNISFNPVAPTIMMKFLNRIVTIEA 306
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD-----PMLNLSL-- 394
+ KI + SL +L+ Q GDIR AI SLQFSS K + +SL
Sbjct: 307 SKNGEKIIVPNKTSL-----ELLCQGCSGDIRSAINSLQFSSSKGENSSWSKKKRMSLKS 361
Query: 395 --SISKPNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFV 450
+ISK ++ IQ G+D +L LF ALGK L+ KR L ++D
Sbjct: 362 DAAISKSKQKKKHNSTLENQEIQAIGGKDVSLFLFRALGKILYCKRAP--LTELDSPRLP 419
Query: 451 VK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
+ R L + PE+++ +H +LH+N ++D +
Sbjct: 420 AHLSEHDRDTLLVQ-PEEIVEMSHMPGDFFNLYLHQN-YIDFFAE 462
Score = 56 (24.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 36 STQQLWTDKYKLCSLEEPDVQKKNVEHFLTPSRFEGL-VNPKR 77
S + W DKYK + E V KK +E T + + L V PK+
Sbjct: 85 SDNEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLEVKPKQ 127
>UNIPROTKB|E2R410 [details] [associations]
symbol:RAD17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042325 "regulation of phosphorylation"
evidence=IEA] [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000077 "DNA
damage checkpoint" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR004582 InterPro:IPR018324 GO:GO:0005634
GO:GO:0000077 GO:GO:0042325 GO:GO:0006281 GO:GO:0007093
GO:GO:0000781 GO:GO:0008156 KO:K06662 PANTHER:PTHR12172 CTD:5884
OMA:NYIDFFM TIGRFAMs:TIGR00602 GeneTree:ENSGT00440000039046
EMBL:AAEX03001497 RefSeq:XP_535265.2 Ensembl:ENSCAFT00000012439
GeneID:478088 KEGG:cfa:478088 Uniprot:E2R410
Length = 680
Score = 256 (95.2 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 81/302 (26%), Positives = 140/302 (46%)
Query: 105 QKENVGRFLTPSRFEGLVN--P-DH----DSASASSSTQQLWAEKYKPRSLEELAVQRKK 157
+++NV L SRF P +H +++ S + W +KYKP + ELAV +KK
Sbjct: 47 RRKNVPSRLESSRFPARKREKPSEHVYGLENSKEYLSENEPWVDKYKPETQHELAVHKKK 106
Query: 158 VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIW 217
+EEV W + ++ + + K ++L+ITG G GKT TV+ ++ G ++ EW P +
Sbjct: 107 IEEVETWLKAKVIERQPKQGGSILLITGPPGCGKTTTVKILSKEHGIQVQEWSNPILPDF 166
Query: 218 QE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLP 270
Q+ + N ++ Y S++ F+ F+ R +Y I+L++DLP
Sbjct: 167 QKDDFKEIFNPESSFHVFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKRIILVEDLP 226
Query: 271 VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARK 330
R + L + L V + P ++++ D+ + +E+Q +
Sbjct: 227 NQFYRDS-HTLHEILRRYVHTGRCPLIFIISDSLSGDN-NQRLLFPKEIQE---ECAIAN 281
Query: 331 VALNPITNGSIKRTLSKICRQEQYSLSTEQI-------DLVAQASGGDIRQAITSLQFSS 383
++ NP+ + + L++I E I +L+ Q GDIR AI SLQFSS
Sbjct: 282 ISFNPVAPTIMMKFLNRIVTMEANKNGGNTIVPDKTSLELLCQGCSGDIRSAINSLQFSS 341
Query: 384 LK 385
K
Sbjct: 342 SK 343
Score = 123 (48.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 69/284 (24%), Positives = 118/284 (41%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 186 YQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKRIILVEDLPNQFYRDS-HTLHEILRRYV 244
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNP-ITNGSIKRTLSKI 348
+ P ++++ D+ + +E+Q A + P I + R ++
Sbjct: 245 HTGRCPLIFIISDSLSGDN-NQRLLFPKEIQEECAIANISFNPVAPTIMMKFLNRIVTME 303
Query: 349 CRQEQYSL---STEQIDLVAQASGGDIRQAITSLQFSS----------------LKQDPM 389
+ + ++L+ Q GDIR AI SLQFSS +K D +
Sbjct: 304 ANKNGGNTIVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGANSLWPRKKGISSIKSDAV 363
Query: 390 LNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQD 447
L+ S K + F ++ GG +D +L LF ALGK L+ KR + L ++D
Sbjct: 364 LSKSKRRKKTDTIFENQEVQAIGG------KDVSLFLFRALGKILYCKRAS--LTELDSP 415
Query: 448 AFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLD 490
+ R L + PE+V+ +H Q +LH+N ++D
Sbjct: 416 RLPSHLSEHERDTLLVQ-PEEVVEMSHMQGELFNLYLHQN-YID 457
Score = 54 (24.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 18 KVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVEHFLT 65
K S ++ EN S + + W DKYK + E V KK +E T
Sbjct: 67 KPSEHVYGLENSKEYLSEN--EPWVDKYKPETQHELAVHKKKIEEVET 112
Score = 49 (22.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 56 QKKNVEHFLTPSRFEGLVNPK-RDLALG-SSSRQQL-----WTNKNKPCSLEEHAIQKEN 108
++KNV L SRF K + G +S++ L W +K KP + E A+ K+
Sbjct: 47 RRKNVPSRLESSRFPARKREKPSEHVYGLENSKEYLSENEPWVDKYKPETQHELAVHKKK 106
Query: 109 V 109
+
Sbjct: 107 I 107
>UNIPROTKB|E1BPL7 [details] [associations]
symbol:RAD17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042325 "regulation of phosphorylation" evidence=IEA]
[GO:0008156 "negative regulation of DNA replication" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000781 "chromosome,
telomeric region" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR003593 InterPro:IPR004582
InterPro:IPR018324 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0000077 GO:GO:0042325 GO:GO:0006281 GO:GO:0017111
GO:GO:0007093 GO:GO:0000781 GO:GO:0008156 PANTHER:PTHR12172
OMA:NYIDFFM TIGRFAMs:TIGR00602 GeneTree:ENSGT00440000039046
EMBL:DAAA02050051 IPI:IPI00904146 Ensembl:ENSBTAT00000002682
Uniprot:E1BPL7
Length = 681
Score = 253 (94.1 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 87/347 (25%), Positives = 153/347 (44%)
Query: 53 PDVQKKNVEHFLTPSRFEGLVNPKRDLALGSSS---RQQLWTNKNKPCSLEEHAIQKENV 109
P V V +++ PS F+G A+ ++S K P +LE
Sbjct: 8 PKVSSTKVTNWVDPS-FDGFSETTSISAITATSLSVNNSSLRRKKVPSTLESSRFPASKG 66
Query: 110 GRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL 169
G + + GL N + S + W +KYKP + ELAV +KK+EEV W + +
Sbjct: 67 GNLSSSKQICGLEN-----SKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAEV 121
Query: 170 GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE----YMHNCK 225
+ + K ++L+ITG G GKT T++ +A G ++ EW P +Q+ + N +
Sbjct: 122 LERQPKQGGSILLITGPPGCGKTTTIKILAKEHGIQVQEWINPVLPEFQKDDFKEILNPE 181
Query: 226 TGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR 282
+ Y S++ F+ F+ R +Y I+L++DLP R + L
Sbjct: 182 SSFHIFPYQSQIAVFKEFLLRATKYNQLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLH 240
Query: 283 QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF-EELQSILVDAGARKVALNPITNGSI 341
+ L V+ P ++++ D+ S F +E+Q + ++ NP+ +
Sbjct: 241 EVLRKYVQIGRCPLIFIISDSLSGDN--SQRLLFPKEIQE---ECAISNISFNPVAPTIM 295
Query: 342 KRTLSKICRQEQYS---LSTEQ--IDLVAQASGGDIRQAITSLQFSS 383
+ L + + + + ++ ++ + Q GDIR AI SLQFSS
Sbjct: 296 MKFLRIVTVEANKNGGKIVPDKTSLEFLCQGCSGDIRSAINSLQFSS 342
Score = 115 (45.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 65/281 (23%), Positives = 117/281 (41%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 189 YQSQIAVFKEFLLRATKYNQLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 247
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSF-EELQSILVDAGARKVALNPITNGSIKRTLSKI 348
+ P ++++ D+ S F +E+Q + + P R ++
Sbjct: 248 QIGRCPLIFIISDSLSGDN--SQRLLFPKEIQEECAISNISFNPVAPTIMMKFLRIVTVE 305
Query: 349 CRQEQYSLSTEQ--IDLVAQASGGDIRQAITSLQFSSL--------KQDPMLNLS----L 394
+ + ++ ++ + Q GDIR AI SLQFSS ++ M +L L
Sbjct: 306 ANKNGGKIVPDKTSLEFLCQGCSGDIRSAINSLQFSSSTGKNNLRPRKKGMSSLKSDVVL 365
Query: 395 SISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK-D 453
S SK ++ + G+D +L LF ALGK L+ KR + ++D
Sbjct: 366 SKSKRRQKTDRIFENQEVQAIGGKDVSLFLFRALGKILYCKRTP--VTEVDSPRLPSHLS 423
Query: 454 KFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
++ R L + PE+V+ +H +LH+N ++D +
Sbjct: 424 EYDRDTLLVQ-PEEVVEMSHMPGELFNLYLHQN-YVDFFTE 462
Score = 59 (25.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 18 KVSNV-IWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVEHFLTPSRF---EG-- 71
KVS+ + N + S G S T + S+ +++K V L SRF +G
Sbjct: 9 KVSSTKVTNWVDPSFDGFSETTSISAITATSLSVNNSSLRRKKVPSTLESSRFPASKGGN 68
Query: 72 LVNPKRDLALGSS----SRQQLWTNKNKPCSLEEHAIQKENV 109
L + K+ L +S S + W +K KP + E A+ K+ +
Sbjct: 69 LSSSKQICGLENSKEYLSENEPWVDKYKPETQHELAVHKKKI 110
Score = 53 (23.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 36 STQQLWTDKYKLCSLEEPDVQKKNVEHFLTPSRFEGLVN-PKR 77
S + W DKYK + E V KK +E T + E L PK+
Sbjct: 86 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAEVLERQPKQ 128
>UNIPROTKB|I3LTZ5 [details] [associations]
symbol:LOC100624938 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007049 "cell cycle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004582 InterPro:IPR018324 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 PANTHER:PTHR12172 OMA:NYIDFFM TIGRFAMs:TIGR00602
GeneTree:ENSGT00440000039046 Ensembl:ENSSSCT00000030759
Uniprot:I3LTZ5
Length = 596
Score = 248 (92.4 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 86/347 (24%), Positives = 147/347 (42%)
Query: 53 PDVQKKNVEHFLTPS--RFEGLVNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVG 110
P V V ++ PS F N A S K P +LE G
Sbjct: 8 PKVSSTKVTDWVDPSFDDFSETTNISTINATSLSVNNSSLRRKKVPSTLESRRSPTRKRG 67
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
+ + L N + S + W +KYKP + ELAV +KK+EEV W + +
Sbjct: 68 NLSSSKQIYSLEN-----SKEYVSENEPWVDKYKPETQHELAVHKKKIEEVETWLKVEVL 122
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE----YMHNCKT 226
+ + ++L+ITG G GKTAT++ ++ G ++ EW P +Q+ + N ++
Sbjct: 123 ERQPTQGGSILLITGPPGCGKTATIKILSKEHGIQVQEWINPVLPEFQKDDFKEIFNPES 182
Query: 227 GLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ 283
Y S++ F+ F+ R +Y + I+L++DLP R L +
Sbjct: 183 SFHIFPYQSQIAVFKEFLLRATKYNKLQMLGDDLTTDKKIILVEDLPNQFYRDP-HILHE 241
Query: 284 CLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKR 343
L V+ P ++++ D+ + +E+Q + ++ NP+ + +
Sbjct: 242 VLRRYVQVGRCPLIFIISDSLSGDN-NHRLLFPKEIQE---ECAISNISFNPVAPTIMMK 297
Query: 344 TLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITSLQFSS 383
L++I +E + ++L+ Q GDIR AI SLQFSS
Sbjct: 298 FLNRIVTKEANKNGGKIIVPDKTSLELLCQGCSGDIRSAINSLQFSS 344
Score = 125 (49.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 72/284 (25%), Positives = 118/284 (41%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y + I+L++DLP R L + L V
Sbjct: 189 YQSQIAVFKEFLLRATKYNKLQMLGDDLTTDKKIILVEDLPNQFYRDP-HILHEVLRRYV 247
Query: 290 RSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVA---LNPITNGSI 341
+ P ++++ D+ + +E + +I + A + LN I
Sbjct: 248 QVGRCPLIFIISDSLSGDNNHRLLFPKEIQEECAISNISFNPVAPTIMMKFLNRIVTKEA 307
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS----------------LK 385
+ KI ++ SL +L+ Q GDIR AI SLQFSS LK
Sbjct: 308 NKNGGKIIVPDKTSL-----ELLCQGCSGDIRSAINSLQFSSSTGKNNLWPRKKGTSSLK 362
Query: 386 QDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVK 443
D L+ S KP+ F ++ GG +D +L LF ALGK L+ KR + + +
Sbjct: 363 SDAALSKSKRRQKPDRVFENQEVQAIGG------KDVSLFLFRALGKILYCKRAS--VTE 414
Query: 444 MDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+D ++ R L + PE+V+ +H +LH+N
Sbjct: 415 LDSPRLPSHLSEYERDTLLIH-PEEVVEMSHMPGDLFNLYLHQN 457
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 20 SNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVEHFLTPSRFEGL 72
S I++ EN S + + W DKYK + E V KK +E T + E L
Sbjct: 72 SKQIYSLENSKEYVSEN--EPWVDKYKPETQHELAVHKKKIEEVETWLKVEVL 122
>POMBASE|SPAC14C4.13 [details] [associations]
symbol:rad17 "RFC related checkpoint protein Rad17"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007095 "mitotic G2 DNA
damage checkpoint" evidence=IMP] [GO:0031389 "Rad17 RFC-like
complex" evidence=TAS] [GO:0031573 "intra-S DNA damage checkpoint"
evidence=IMP] [GO:0033314 "mitotic DNA replication checkpoint"
evidence=IMP] [GO:0003689 "DNA clamp loader activity" evidence=TAS]
InterPro:IPR003593 InterPro:IPR004582 InterPro:IPR018324
SMART:SM00382 PomBase:SPAC14C4.13 GO:GO:0005524 GO:GO:0007095
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0000790
GO:GO:0017111 eggNOG:COG0470 GO:GO:0033314 GO:GO:0031573 KO:K06662
PANTHER:PTHR12172 TIGRFAMs:TIGR00602 EMBL:X91889 PIR:S60090
RefSeq:NP_594918.1 ProteinModelPortal:P50531 STRING:P50531
EnsemblFungi:SPAC14C4.13.1 GeneID:2541643 KEGG:spo:SPAC14C4.13
OMA:SLVENIC OrthoDB:EOG4WDHNC NextBio:20802736 GO:GO:0031389
Uniprot:P50531
Length = 606
Score = 204 (76.9 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 74/263 (28%), Positives = 119/263 (45%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
QLW EKY P+ +LAV + K+ ++ W L DS + + +L+I G +G GK+ V+
Sbjct: 70 QLWFEKYIPQKAADLAVHKSKISAIKQWM---LTDSLE---SRLLLICGPSGCGKSTAVQ 123
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG-STSPSIP 255
+A LG L EW P +E + L T K F + E S +I
Sbjct: 124 VLAKELGYSLIEWLNPMNL--KEPSNQESDTLSLTEKFSRFMSLCETYPELELMDSNNIQ 181
Query: 256 GESKSSA----ILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHIPTAV-VLTEC--GKAD 307
K++ + +D++P ++ + + R + + S + + VLTE +
Sbjct: 182 KRGKNAQGKKKFIFLDEIPHLSKFNGSLDAFRNVIRTALTSRGAFSIIMVLTEIQLNNLE 241
Query: 308 SVDSTAQ-SFEELQ----SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
++S + SF +Q +L D + NPI +K+ L I R+E S + +
Sbjct: 242 GINSQDRNSFNSVQIMGNDLLQDPRVTVLQFNPIAPTYMKKCLGSILRKEGVPKSPKLLS 301
Query: 363 LV---AQASGGDIRQAITSLQFS 382
LV AS GD+R AI SLQ S
Sbjct: 302 LVENICSASEGDLRSAINSLQLS 324
Score = 64 (27.6 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 416 FGRDETLSLFHALGKFLHNKRETDNLV 442
F +D L + HA+GK + NKRE D+ V
Sbjct: 391 FKKDVGLGMMHAIGKVVWNKREGDDEV 417
Score = 40 (19.1 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 54 DVQKKNVEHFLTP-SRFEGLVNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENV 109
D+ ++++E F ++ L N K D R QLW K P + A+ K +
Sbjct: 42 DIHEEDIEAFSDEENKIVHLNNLKED-------RFQLWFEKYIPQKAADLAVHKSKI 91
>UNIPROTKB|I3L4H4 [details] [associations]
symbol:RAD17 "Cell cycle checkpoint protein RAD17"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004582 InterPro:IPR018324
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 GO:GO:0017111 PANTHER:PTHR12172 TIGRFAMs:TIGR00602
EMBL:AC145145 ProteinModelPortal:I3L4H4 SMR:I3L4H4 PRIDE:I3L4H4
Ensembl:ENST00000575476 Bgee:I3L4H4 Uniprot:I3L4H4
Length = 584
Score = 216 (81.1 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 67/250 (26%), Positives = 120/250 (48%)
Query: 150 ELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW
Sbjct: 5 ELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEW 64
Query: 210 DTPTPTIWQEY----MHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSA 262
P +Q+ M N ++ Y S++ F+ F+ R +Y
Sbjct: 65 INPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKK 124
Query: 263 ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
I+L++DLP R + L + L VR P ++++ D+ + +E+Q
Sbjct: 125 IILVEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN-NQRLLFPKEIQE- 181
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQE------QYSLSTE-QIDLVAQASGGDIRQA 375
+ ++ NP+ + + L++I E + ++ + ++L+ Q GDIR A
Sbjct: 182 --ECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSA 239
Query: 376 ITSLQFSSLK 385
I SLQFSS K
Sbjct: 240 INSLQFSSSK 249
Score = 142 (55.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 75/291 (25%), Positives = 124/291 (42%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 92 YQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 150
Query: 290 RSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVA---LNPITNGSI 341
R P ++++ D+ + +E + +I + A + LN I
Sbjct: 151 RIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTIEA 210
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS---------------LKQ 386
+ KI ++ SL +L+ Q GDIR AI SLQFSS LK
Sbjct: 211 NKNGGKITVPDKTSL-----ELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKS 265
Query: 387 DPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKM 444
D +L+ S KP+ F ++ GG +D +L LF ALGK L+ KR + L ++
Sbjct: 266 DAVLSKSKRRKKPDRVFENQEVQAIGG------KDVSLFLFRALGKILYCKRAS--LTEL 317
Query: 445 DQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
D ++ R L ++ PE+V+ +H +LH+N ++D +
Sbjct: 318 DSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFNLYLHQN-YIDFFME 366
>UNIPROTKB|D6RAW6 [details] [associations]
symbol:RAD17 "Cell cycle checkpoint protein RAD17"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] InterPro:IPR004582 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 EMBL:AC145132 EMBL:AC145146 PANTHER:PTHR12172
HGNC:HGNC:9807 EMBL:AC145145 IPI:IPI00965621 SMR:D6RAW6
Ensembl:ENST00000506564 Ensembl:ENST00000575747 Uniprot:D6RAW6
Length = 169
Score = 181 (68.8 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 42/134 (31%), Positives = 69/134 (51%)
Query: 79 LALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQL 138
L + +SS ++ KN P +LE G + + GL N + S +
Sbjct: 29 LGVNNSSHRR----KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEP 79
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ +
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 199 ASHLGARLYEWDTP 212
+ G ++ EW P
Sbjct: 140 SKEHGIQVQEWINP 153
>UNIPROTKB|F1SKR7 [details] [associations]
symbol:LOC100515763 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007049 "cell cycle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004582 InterPro:IPR018324 GO:GO:0005634 GO:GO:0006281
GO:GO:0007049 KO:K06662 OMA:DFLHENV PANTHER:PTHR12172
TIGRFAMs:TIGR00602 GeneTree:ENSGT00440000039046 EMBL:FP085444
RefSeq:XP_003134068.3 Ensembl:ENSSSCT00000018469 GeneID:100515763
KEGG:ssc:100515763 Uniprot:F1SKR7
Length = 585
Score = 202 (76.2 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 64/248 (25%), Positives = 116/248 (46%)
Query: 150 ELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
ELAV +KK+EEV W + + + + ++L+ITG G GKTAT++ ++ G ++ EW
Sbjct: 2 ELAVHKKKIEEVETWLKVEVLERQPTQGGSILLITGPPGCGKTATIKILSKEHGIQVQEW 61
Query: 210 DTPTPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSA 262
P +Q+ + N ++ Y S++ F+ F+ R +Y +
Sbjct: 62 INPVLPEFQKDDFKEIFNPESSFHIFPYQSQIAVFKEFLLRATKYNKLQMLGDDLTTDKK 121
Query: 263 ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
I+L++DLP R L + L V+ P ++++ D+ + +E+Q
Sbjct: 122 IILVEDLPNQFYRDP-HILHEVLRRYVQVGRCPLIFIISDSLSGDN-NHRLLFPKEIQE- 178
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQA 375
+ ++ NP+ + + L++I +E + ++L+ Q GDIR A
Sbjct: 179 --ECAISNISFNPVAPTIMMKFLNRIVTKEANKNGGKIIVPDKTSLELLCQGCSGDIRSA 236
Query: 376 ITSLQFSS 383
I SLQFSS
Sbjct: 237 INSLQFSS 244
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 72/284 (25%), Positives = 118/284 (41%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y + I+L++DLP R L + L V
Sbjct: 89 YQSQIAVFKEFLLRATKYNKLQMLGDDLTTDKKIILVEDLPNQFYRDP-HILHEVLRRYV 147
Query: 290 RSTHIPTAVVLTECGKADSVDSTA--QSFEE---LQSILVDAGARKVA---LNPITNGSI 341
+ P ++++ D+ + +E + +I + A + LN I
Sbjct: 148 QVGRCPLIFIISDSLSGDNNHRLLFPKEIQEECAISNISFNPVAPTIMMKFLNRIVTKEA 207
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS----------------LK 385
+ KI ++ SL +L+ Q GDIR AI SLQFSS LK
Sbjct: 208 NKNGGKIIVPDKTSL-----ELLCQGCSGDIRSAINSLQFSSSTGKNNLWPRKKGTSSLK 262
Query: 386 QDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVK 443
D L+ S KP+ F ++ GG +D +L LF ALGK L+ KR + + +
Sbjct: 263 SDAALSKSKRRQKPDRVFENQEVQAIGG------KDVSLFLFRALGKILYCKRAS--VTE 314
Query: 444 MDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+D ++ R L + PE+V+ +H +LH+N
Sbjct: 315 LDSPRLPSHLSEYERDTLLIH-PEEVVEMSHMPGDLFNLYLHQN 357
>ASPGD|ASPL0000045765 [details] [associations]
symbol:AN8876 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IEA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IEA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA]
InterPro:IPR004582 GO:GO:0005634 EMBL:BN001307 GO:GO:0006281
GO:GO:0007049 PANTHER:PTHR12172 EnsemblFungi:CADANIAT00007996
HOGENOM:HOG000169019 OMA:AVHKRKV Uniprot:C8VLU6
Length = 766
Score = 167 (63.8 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 51/172 (29%), Positives = 84/172 (48%)
Query: 113 LTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDS 172
++PS E L NP A WA++Y P +L+ELAV ++KV +V W + L
Sbjct: 111 VSPSNNE-LPNPTPSEKGALP-----WAQRYAPLNLDELAVHKRKVGDVERWLSDAL--- 161
Query: 173 KDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
+ K N+L++ G AG GKT T+ ++ L + EW TP+ T+ ++ K +Y S
Sbjct: 162 EGKTRKNLLILRGPAGSGKTTTISLLSKKLRFDVLEWKTPS-TV----TYSSK---DYVS 213
Query: 233 KLDEFENFVERIRRYGST------SPSIP---GESKSSAILLIDDLPVTNGR 275
+F+ F+ R +GS S +P + ++LI++ P R
Sbjct: 214 FGAQFDGFLSRSHIFGSLTLDGHHSSQVPLNNDHASQRRVILIEEFPTMAAR 265
Score = 75 (31.5 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 38/156 (24%), Positives = 70/156 (44%)
Query: 341 IKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ-------DPMLNLS 393
+K++ + C + +L+ I+ +++ GDIR AI SL+F L DP +
Sbjct: 356 LKKSSCQPCGNQ--TLTQSIIENISKI--GDIRNAIASLEFICLGNGNKGYWSDPTVKTR 411
Query: 394 LSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE--TD-NLVKMDQDAFV 450
+ ++ I R+ +L LFHA+GK ++NKR +D V++
Sbjct: 412 RT-ARTRMKNTAVGSEMREEIA-QREASLGLFHAVGKIIYNKRSDASDAEHVQLPSPPDH 469
Query: 451 VKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
++D R + M ++L + + + LHEN
Sbjct: 470 LRDH-DRPTVSMVHVNELLDETGTDIQLFIGTLHEN 504
>UNIPROTKB|I3L3D2 [details] [associations]
symbol:RAD17 "Cell cycle checkpoint protein RAD17"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] InterPro:IPR004582 InterPro:IPR018324 GO:GO:0005634
GO:GO:0006281 GO:GO:0007049 PANTHER:PTHR12172 TIGRFAMs:TIGR00602
EMBL:AC145145 ProteinModelPortal:I3L3D2 Ensembl:ENST00000571123
Bgee:I3L3D2 Uniprot:I3L3D2
Length = 505
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 70/284 (24%), Positives = 127/284 (44%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 13 YQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 71
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC 349
R P ++++ D+ + +E+Q + ++ NP+ + + L++I
Sbjct: 72 RIGRCPLIFIISDSLSGDN-NQRLLFPKEIQE---ECSISNISFNPVAPTIMMKFLNRIV 127
Query: 350 RQE------QYSLSTE-QIDLVAQASGGDIRQAITSLQFSSLKQDPMLN-----LSLS-- 395
E + ++ + ++L+ Q GDIR AI SLQFSS K + L +SL
Sbjct: 128 TIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSD 187
Query: 396 --ISKPNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVV 451
+SK ++ +Q G+D +L LF ALGK L+ KR + L ++D
Sbjct: 188 AVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRAS--LTELDSPRLPS 245
Query: 452 K-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
++ R L ++ PE+V+ +H +LH+N ++D +
Sbjct: 246 HLSEYERDTLLVE-PEEVVEMSHMPGDLFNLYLHQN-YIDFFME 287
>ZFIN|ZDB-GENE-040824-3 [details] [associations]
symbol:rfc4 "replication factor C (activator 1) 4"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR008921 Pfam:PF00004 SMART:SM00382
InterPro:IPR013748 ZFIN:ZDB-GENE-040824-3 GO:GO:0005524
GO:GO:0003677 GO:GO:0006260 GO:GO:0060041 GO:GO:0017111 KO:K10755
eggNOG:COG0470 SUPFAM:SSF48019 HOVERGEN:HBG002053 Pfam:PF08542
CTD:5984 HOGENOM:HOG000224154 OMA:ICFRGTF OrthoDB:EOG4Q58PN
EMBL:AY648805 IPI:IPI00506924 RefSeq:NP_999902.2 UniGene:Dr.77554
ProteinModelPortal:Q6DRF4 STRING:Q6DRF4 PRIDE:Q6DRF4 GeneID:406435
KEGG:dre:406435 NextBio:20818031 ArrayExpress:Q6DRF4 Bgee:Q6DRF4
Uniprot:Q6DRF4
Length = 358
Score = 96 (38.9 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 330 KVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQ 380
K P+ N + + +ICR+E +TE +D + + S GD+R+AIT LQ
Sbjct: 191 KFRFKPLANDVQQERILEICRKENLKYTTEGVDALVRVSEGDLRKAITFLQ 241
Score = 92 (37.4 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 31/87 (35%), Positives = 44/87 (50%)
Query: 124 PDHDSASASSSTQQL--WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVL 181
P S+S Q+ W EKY+P+ ++E+A Q EEV A ++ L + D N+L
Sbjct: 18 PSSSSSSGGEKKQRAVPWVEKYRPKCVDEVAFQ----EEVVAVLKKSL-EGADL--PNLL 70
Query: 182 VITGQAGVGKTATVRQIASHL-GARLY 207
G G GKT+T+ A L G LY
Sbjct: 71 FY-GPPGTGKTSTILAAARELYGPDLY 96
>SGD|S000000975 [details] [associations]
symbol:RAD24 "Checkpoint protein" species:4932 "Saccharomyces
cerevisiae" [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077 "DNA
damage checkpoint" evidence=IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0006289
"nucleotide-excision repair" evidence=IMP] [GO:0031389 "Rad17
RFC-like complex" evidence=IDA] [GO:0003689 "DNA clamp loader
activity" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004582 InterPro:IPR018324 SGD:S000000975 GO:GO:0005524
GO:GO:0005634 GO:GO:0000077 EMBL:BK006939 eggNOG:COG0470
EMBL:U18922 GO:GO:0007131 GO:GO:0006289 KO:K06662 PANTHER:PTHR12172
TIGRFAMs:TIGR00602 GeneTree:ENSGT00440000039046 GO:GO:0031389
PIR:S30859 RefSeq:NP_011100.1 ProteinModelPortal:P32641 SMR:P32641
DIP:DIP-5811N IntAct:P32641 MINT:MINT-676112 STRING:P32641
EnsemblFungi:YER173W GeneID:856920 KEGG:sce:YER173W CYGD:YER173w
HOGENOM:HOG000141951 OMA:FHAIGKV OrthoDB:EOG4P2TBF NextBio:983380
Genevestigator:P32641 GermOnline:YER173W Uniprot:P32641
Length = 659
Score = 137 (53.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 67/321 (20%), Positives = 146/321 (45%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKT--GLEYTSKLDEFENFVERIR--RYGSTSPS 253
++ L + + T H G + L + E+F E ++ RY S
Sbjct: 122 LSKILVPKYRQNSNGTSFRSTPNEHKVTEFRGDCIVNDLPQMESFSEFLKGARYLVMS-- 179
Query: 254 IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTH--IPTAVV-LTECGKADSVD 310
+ +++LI+DLP R +Q +L + S+ +P V+ +TEC ++ D
Sbjct: 180 ------NLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEIPEN-D 232
Query: 311 STAQSFEELQSILVDAGARK-VALNP-ITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+ + F + + K + ++P + S + ++ + + + ++ + +
Sbjct: 233 NNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKMLKEKN 292
Query: 369 GGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHAL 428
+ RQ + + Q+ ++ +I+ F A G I R+ T+S FHA+
Sbjct: 293 KWNKRQEVIDY----IAQETG-DIRSAITTLQF---WATSSGSLPIST-RESTISYFHAI 343
Query: 429 GKFLHNKRETDNLVKMDQDAF 449
GK +H T+N +M + F
Sbjct: 344 GKVIHGSHSTNNDNEMINNLF 364
Score = 41 (19.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 90 WTNKNKPCSLEEHAIQKENV 109
W K KP LE+ AI K +
Sbjct: 66 WYEKFKPNCLEQVAIHKRKL 85
Score = 40 (19.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 17 SKVSNVIWNQENDSALGSSSTQ--QLWTDKYKLCSLEEPDVQKKNVE 61
S ++ + Q+ S L S + + W +K+K LE+ + K+ ++
Sbjct: 40 STENDFLSKQDTSSILPSINDDGGEQWYEKFKPNCLEQVAIHKRKLK 86
>UNIPROTKB|Q29RS9 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005663 "DNA replication factor C complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR008921
Pfam:PF00004 SMART:SM00382 InterPro:IPR013748 GO:GO:0005524
GO:GO:0003677 GO:GO:0006260 GO:GO:0017111 KO:K10755 eggNOG:COG0470
SUPFAM:SSF48019 GO:GO:0005663 HOVERGEN:HBG002053 Pfam:PF08542
CTD:5984 HOGENOM:HOG000224154 GeneTree:ENSGT00550000074917
OMA:QQLSQNC EMBL:DAAA02001847 EMBL:DAAA02001846 EMBL:BC114041
IPI:IPI00728867 RefSeq:NP_001039359.1 UniGene:Bt.102331
STRING:Q29RS9 Ensembl:ENSBTAT00000045810 GeneID:504637
KEGG:bta:504637 NextBio:20866768 Uniprot:Q29RS9
Length = 337
Score = 87 (35.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 115 PSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKD 174
P++ G+ S + W EKY+P+ ++E+A Q EEV A ++ L + D
Sbjct: 16 PTKDRGVTATARSSGENKKAKPVPWVEKYRPKCVDEVAFQ----EEVVAVLKKSL-EGAD 70
Query: 175 KFSTNVLVITGQAGVGKTATVRQIASHL-GARLY 207
N+L G G GKT+T+ A L G L+
Sbjct: 71 L--PNLLFY-GPPGTGKTSTILAAARELFGPELF 101
Score = 74 (31.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 330 KVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQ 380
K P+++ ++ L I +E +S E I + Q S GD+R+AIT LQ
Sbjct: 196 KFRFKPLSDKIQQQRLLDIADKEHVKISNEGIAYLVQVSEGDLRKAITFLQ 246
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 544 526 0.00091 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 618 (66 KB)
Total size of DFA: 314 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.79u 0.09s 50.88t Elapsed: 00:00:02
Total cpu time: 50.79u 0.09s 50.88t Elapsed: 00:00:02
Start: Mon May 20 22:05:17 2013 End: Mon May 20 22:05:19 2013