BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009072
(544 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297734977|emb|CBI17339.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/382 (62%), Positives = 297/382 (77%), Gaps = 8/382 (2%)
Query: 119 EGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST 178
EGL + S+ ++LW +KYKPRSLEELAV +KKVEEV WFE+RL S+++
Sbjct: 71 EGLTGFKVSAGSSRCGGKELWVDKYKPRSLEELAVHKKKVEEVTVWFEKRLRTSREEM-C 129
Query: 179 NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
N+LVITGQAGVGK+AT+ IASHLGARL EW+TP PTIWQE++HN +G+ YTSKLDEFE
Sbjct: 130 NLLVITGQAGVGKSATIHAIASHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFE 189
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAV 298
+FVER+R+YG PS GESKSS ILLIDDLPVTNG ++ RLR CL LL +ST IPTA+
Sbjct: 190 SFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAI 249
Query: 299 VLTECGKADSVD--STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++T+ GKADS D +TA+ EELQ L +AGA K+A NPIT+ SIK+TLSKICRQEQ +
Sbjct: 250 LITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGV 309
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG----HGGF 412
+ +QIDL+A++SGGD+R AITSLQ+ LK DPML+LS S + +EK+D GF
Sbjct: 310 TADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKSDELNPLDDGF 369
Query: 413 SIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQA 472
S+ FGRDETLSLFHALGKFLHNKRE++N + Q+AF+V+++ +RLPLKMDAPE+VL QA
Sbjct: 370 SLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLTRLPLKMDAPERVLCQA 429
Query: 473 HGQARPVLDFLHENCWLDIMRQ 494
H QARPV+DFLHEN LD + +
Sbjct: 430 HVQARPVVDFLHENV-LDFLSE 450
>gi|359476809|ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis
vinifera]
Length = 1013
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/382 (62%), Positives = 297/382 (77%), Gaps = 8/382 (2%)
Query: 119 EGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST 178
EGL + S+ ++LW +KYKPRSLEELAV +KKVEEV WFE+RL S+++
Sbjct: 71 EGLTGFKVSAGSSRCGGKELWVDKYKPRSLEELAVHKKKVEEVTVWFEKRLRTSREEM-C 129
Query: 179 NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
N+LVITGQAGVGK+AT+ IASHLGARL EW+TP PTIWQE++HN +G+ YTSKLDEFE
Sbjct: 130 NLLVITGQAGVGKSATIHAIASHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFE 189
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAV 298
+FVER+R+YG PS GESKSS ILLIDDLPVTNG ++ RLR CL LL +ST IPTA+
Sbjct: 190 SFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAI 249
Query: 299 VLTECGKADSVD--STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++T+ GKADS D +TA+ EELQ L +AGA K+A NPIT+ SIK+TLSKICRQEQ +
Sbjct: 250 LITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGV 309
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG----HGGF 412
+ +QIDL+A++SGGD+R AITSLQ+ LK DPML+LS S + +EK+D GF
Sbjct: 310 TADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKSDELNPLDDGF 369
Query: 413 SIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQA 472
S+ FGRDETLSLFHALGKFLHNKRE++N + Q+AF+V+++ +RLPLKMDAPE+VL QA
Sbjct: 370 SLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLTRLPLKMDAPERVLCQA 429
Query: 473 HGQARPVLDFLHENCWLDIMRQ 494
H QARPV+DFLHEN LD + +
Sbjct: 430 HVQARPVVDFLHENV-LDFLSE 450
>gi|224133656|ref|XP_002327648.1| predicted protein [Populus trichocarpa]
gi|222836733|gb|EEE75126.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/364 (61%), Positives = 280/364 (76%), Gaps = 7/364 (1%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
+ S S+ ++LW +K+KP+SLEELAV +KKVEEV++WFEERL +K NV+VI G+A
Sbjct: 88 AGSGRSNVKELWVDKHKPQSLEELAVHKKKVEEVKSWFEERLKTTKGNLINNVVVINGKA 147
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
GVGK+ T++ IASH GARL EW+TPTPTIWQE++HN TG++YTSKLDEF NF+E+IR+Y
Sbjct: 148 GVGKSTTIQVIASHFGARLCEWNTPTPTIWQEHVHNTNTGIQYTSKLDEFVNFIEKIRKY 207
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
G S + K S ILLIDDLP+TNGR AFERL+ CLL LVRST +PTA+++++ +AD
Sbjct: 208 GLIPSSSSEDVKPSIILLIDDLPMTNGRVAFERLQSCLLHLVRSTQLPTAILVSDYDEAD 267
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
S D TA+ E+LQ L +AGA KV+ NPITN SIK+TLS+ICRQEQ S++ EQ+DL+A+
Sbjct: 268 SADHTARRLEQLQLSLENAGACKVSFNPITNNSIKKTLSRICRQEQCSVTDEQLDLIAKG 327
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG----HGGFSIQFGRDETLS 423
SGGDIR AITSLQ +K D +LN S S P++ K D G S+ FGRDETLS
Sbjct: 328 SGGDIRHAITSLQLFCVKPDLVLNGSYST--PSYLYGKEDDIDALVSGISLLFGRDETLS 385
Query: 424 LFHALGKFLHNKRETDNLVKMDQ-DAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDF 482
LFHALGKFLHNKRET+ + DAF+V++ FSRLPLKMDAPEKVL QAHGQARPV DF
Sbjct: 386 LFHALGKFLHNKRETEVANAITPGDAFLVQENFSRLPLKMDAPEKVLCQAHGQARPVTDF 445
Query: 483 LHEN 486
LHEN
Sbjct: 446 LHEN 449
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 1 MQISLSFEKFDEVLNGSKVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNV 60
++ E F+E+ +GSKVS + G S+ ++LW DK+K SLEE V KK V
Sbjct: 68 FEVGFPEEDFEELFSGSKVS---------AGSGRSNVKELWVDKHKPQSLEELAVHKKKV 118
Query: 61 E 61
E
Sbjct: 119 E 119
>gi|297797775|ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312607|gb|EFH43031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/367 (59%), Positives = 261/367 (71%), Gaps = 19/367 (5%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
S LW +KY+PR+LEELAV +KKVE+V+ WFEE L SKD NVL++TGQAGVGK+
Sbjct: 76 SKNTDLWVDKYRPRTLEELAVHKKKVEQVKLWFEESLDFSKDGLRNNVLLVTGQAGVGKS 135
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
AT+ IAS LG +YEW+ P PTIWQE++HN +GL+YTSKLDEFENFVE R+YG +
Sbjct: 136 ATIHLIASILGVTVYEWNAPIPTIWQEHVHNSSSGLKYTSKLDEFENFVESTRKYGVMAS 195
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
S K+ ILLIDDLP+ NGR A ERL+ CLLLLVRST IPT +++T+ KADS D T
Sbjct: 196 SSTEGIKAPVILLIDDLPLANGRHACERLQNCLLLLVRSTQIPTVILITDYDKADSSDQT 255
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
A+S E+ QS L AGA KVA NPIT SIK+ L +ICR+E ++T +ID +A ASGGDI
Sbjct: 256 ARSMEDAQSSLERAGALKVAFNPITKNSIKKALQRICREEHCKVTTMEIDQMASASGGDI 315
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG--HG-----------GFSIQFGRD 419
R AITSLQ S+K D L+ +K P D HG G S FGRD
Sbjct: 316 RHAITSLQLFSVKPD------LNHTKIKSPRPGMDDSYHGNEQTMYSGLDSGISSCFGRD 369
Query: 420 ETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPV 479
ETLSLFHALGKFLHNKRETDN++ D +V D+F+RLPLKMDAPEKVLSQAHGQA V
Sbjct: 370 ETLSLFHALGKFLHNKRETDNVIVSDCSNSLVHDEFARLPLKMDAPEKVLSQAHGQAGRV 429
Query: 480 LDFLHEN 486
+DFLHEN
Sbjct: 430 VDFLHEN 436
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 2 QISLSFEKFDEVLNGSKVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVE 61
+I LSFE FDE L+G KVS S S LW DKY+ +LEE V KK VE
Sbjct: 52 KIRLSFEDFDEALSGFKVS---------SGYERSKNTDLWVDKYRPRTLEELAVHKKKVE 102
>gi|449434132|ref|XP_004134850.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Cucumis
sativus]
gi|449491306|ref|XP_004158856.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Cucumis
sativus]
Length = 605
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/371 (56%), Positives = 263/371 (70%), Gaps = 8/371 (2%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
+ S S +LW +KY+P SLEELAVQ+KKV+EV+ WFE+RL D +NV++ITG A
Sbjct: 86 AGSGSVCRNELWIDKYRPHSLEELAVQKKKVDEVKVWFEDRLRTPMDANGSNVILITGPA 145
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
GVGK+ATV IASHLGARL EWDTPTP IW+E++HN G++YTSKLDEFE+F+ R+R+Y
Sbjct: 146 GVGKSATVHVIASHLGARLCEWDTPTPVIWREHLHNLTAGIQYTSKLDEFESFIGRMRKY 205
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
G +SK ILLIDDLP+TNG+ A RL+ CL L V+ST +PTA+V+T+C KA+
Sbjct: 206 GVIPSCFSIDSKQPVILLIDDLPLTNGKAALRRLQSCLHLYVQSTQVPTAIVITDCAKAE 265
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
+ D T Q EE+Q L +AGA KVA NPITN SIK+T+S+IC EQY L+ EQID +A++
Sbjct: 266 TTDFTVQYLEEIQLCLENAGACKVAFNPITNNSIKKTISRICSCEQYDLAVEQIDAIAKS 325
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSL----SISKPNFPEEKADGHGGFSIQFGRDETLS 423
SGGD+R AI SLQ LK + + S S+ P D FS QFGRDETLS
Sbjct: 326 SGGDVRHAIMSLQLFCLKPSQICSSSSSAQESLKDEEMPHTLVDDR--FSFQFGRDETLS 383
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL 483
LFHALGKFLHNKR + N + +D + F V++ R PL MD PEKVL QAHGQARP+ DFL
Sbjct: 384 LFHALGKFLHNKRHSVNELVLDSE-FSVQESLLRRPLNMDPPEKVLCQAHGQARPIADFL 442
Query: 484 HENCWLDIMRQ 494
HEN LD M +
Sbjct: 443 HENV-LDFMNE 452
>gi|357517967|ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
gi|355523294|gb|AET03748.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
Length = 604
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/364 (55%), Positives = 264/364 (72%), Gaps = 5/364 (1%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
S+ ++LW +KYKP SLEELAV +KKVEEV+ WFEERL SK + NVLV++GQAG+GK+
Sbjct: 88 STAEELWVDKYKPHSLEELAVHKKKVEEVKTWFEERLKPSKGVYRNNVLVVSGQAGIGKS 147
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
A + IASHLGA + W+TPTP IWQE+++N T +YTSKLDEF +FVERIR +G
Sbjct: 148 AAIHVIASHLGAMVCGWNTPTPVIWQEHLYNSGTETKYTSKLDEFVSFVERIRTFGLIPT 207
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
S GESK S I LIDDLP+ + + A RL+ CL LLV +T IPTA+++T+ G DS D
Sbjct: 208 SFTGESKPSIIYLIDDLPMMHSKAALGRLKDCLNLLVHTTRIPTAILVTDYGNTDSADYN 267
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
A+S EEL++ L +GA K+A NPIT SIK+ L +IC+ EQ ++ + +DL+A+ASGGDI
Sbjct: 268 ARSVEELKTSLESSGACKIAFNPITVNSIKKILFRICQMEQCDVTADNVDLIAKASGGDI 327
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG----HGGFSIQFGRDETLSLFHAL 428
R AITSLQF L + + +LS S P+ +E+++ G S+ FGRDETLSLFHAL
Sbjct: 328 RHAITSLQFFCLNPNQVHSLSQSTRSPHALKEESNKPVELDDGSSLYFGRDETLSLFHAL 387
Query: 429 GKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCW 488
GKFLHNKRET V+ DQ+ F++ ++FSRLPLKMD PEK+L Q+H Q PV DFLHEN
Sbjct: 388 GKFLHNKRETGVAVEYDQNGFLIHERFSRLPLKMDVPEKILCQSHVQPGPVADFLHENV- 446
Query: 489 LDIM 492
LD +
Sbjct: 447 LDFL 450
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 2 QISLSFEKFDEVLNGSKVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVE 61
+I+L + F++V GSKV Q S+ ++LW DKYK SLEE V KK VE
Sbjct: 62 EINLFDDDFNQVFTGSKVFAAAGTQR-------STAEELWVDKYKPHSLEELAVHKKKVE 114
Query: 62 HFLTPSRFEGLVNPKR 77
T FE + P +
Sbjct: 115 EVKT--WFEERLKPSK 128
>gi|15239269|ref|NP_201414.1| cell cycle checkpoint protein RAD17 [Arabidopsis thaliana]
gi|55976607|sp|Q9MBA3.1|RAD17_ARATH RecName: Full=Cell cycle checkpoint protein RAD17; Short=AtRAD17;
AltName: Full=Radiation-sensitive protein 17
gi|6855472|dbj|BAA90479.1| AtRAD17 [Arabidopsis thaliana]
gi|10177128|dbj|BAB10418.1| AtRAD17 [Arabidopsis thaliana]
gi|332010780|gb|AED98163.1| cell cycle checkpoint protein RAD17 [Arabidopsis thaliana]
Length = 599
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/366 (57%), Positives = 261/366 (71%), Gaps = 15/366 (4%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
S LW +KY+PR+LEEL+V +KKV+EV+ WF+E L K+ NVL++TGQAGVGK+
Sbjct: 87 SKNTDLWVDKYRPRTLEELSVHKKKVDEVKLWFQESLDFLKNGLRNNVLLVTGQAGVGKS 146
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
AT+ I S LG ++EW+ P PTIWQE++HN +GL+YTSKLDEFENFVE R+YG +
Sbjct: 147 ATIHLITSILGVTVHEWNAPIPTIWQEHVHNTSSGLKYTSKLDEFENFVESTRKYGVMAS 206
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
S K+ +LLIDDLP+ NGR AFERL+ CLLLLV+ST IPT +++T+ ADS D T
Sbjct: 207 SSTDGIKAPVVLLIDDLPLANGRHAFERLQNCLLLLVKSTQIPTVILITDHNNADSSDQT 266
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
A+ E+ QS L AGA KVA NPIT SIK+ L +ICR+E ++T +ID +A ASGGDI
Sbjct: 267 ARRMEDTQSSLERAGALKVAFNPITKNSIKKVLQRICREEHCKVTTMEIDQMATASGGDI 326
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG-----------GFSIQFGRDET 421
R AITSLQ S+K P LN + I P P + + HG G S FGRDET
Sbjct: 327 RHAITSLQLFSVK--PELNHT-KIKSPR-PGMEDNYHGNEQTMYSGLDSGISSCFGRDET 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLD 481
LSLFHALGKFLHNKRETDN++ + + +V D+F+RLPLKMDAPEKVLSQAHGQA V+D
Sbjct: 383 LSLFHALGKFLHNKRETDNVIISECSSSLVHDEFARLPLKMDAPEKVLSQAHGQAGRVVD 442
Query: 482 FLHENC 487
FLHEN
Sbjct: 443 FLHENV 448
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 2 QISLSFEKFDEVLNGSKVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVE 61
+I LSFE FDE L+G KVS S S LW DKY+ +LEE V KK V+
Sbjct: 63 KIRLSFEDFDEALSGFKVS---------SGYERSKNTDLWVDKYRPRTLEELSVHKKKVD 113
>gi|356561124|ref|XP_003548835.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Glycine max]
Length = 651
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/352 (57%), Positives = 255/352 (72%), Gaps = 6/352 (1%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+ LW +KYKP SLEELAV +KKVEEV+ WFEERL SK + NVLVI+GQAGVGK+A
Sbjct: 141 AEDLWIDKYKPCSLEELAVHKKKVEEVKTWFEERLKPSKGAYCNNVLVISGQAGVGKSAA 200
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+ IASHLGA + W+TPTP IWQE+++N TG +YTSKLDEFE+FV+R+R+YG S
Sbjct: 201 IHVIASHLGAVVCGWNTPTPVIWQEHLYNSGTGTKYTSKLDEFESFVDRVRKYGLLLTSH 260
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
GESK S ILLIDDLP+TNG++AF RL+ CL +LV ST IPTA++ T+ G ADS D A+
Sbjct: 261 TGESKPSVILLIDDLPLTNGKSAFRRLKDCLHVLVNSTQIPTAILFTDYGNADSADYNAR 320
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
EEL+ L +GA KVA NPIT ++K+ L +IC+ E ++ E +DL+A+ SGGDIR
Sbjct: 321 CLEELKLSLESSGACKVAFNPITLNTMKKILFRICQMEHCDVTAEYVDLIAKTSGGDIRH 380
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
AITSLQF LK +L + + P D G+S+ FGRDETLSLFHALGKFLHN
Sbjct: 381 AITSLQFFCLKPSTCYRGALK-EESDKPVRSDD---GYSLHFGRDETLSLFHALGKFLHN 436
Query: 435 KRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
KRE+ V + D F+++++ SRLPLKMD PEK+L QAH Q PV DFLHEN
Sbjct: 437 KRESG--VSTEYDGFLMQERLSRLPLKMDVPEKILYQAHVQPGPVADFLHEN 486
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 2 QISLSFEKFDEVLNGSKVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVE 61
+I L + F+EV GSKVS + + LW DKYK CSLEE V KK VE
Sbjct: 115 EIDLFGDDFNEVFTGSKVS---------AGTHRHYAEDLWIDKYKPCSLEELAVHKKKVE 165
Query: 62 HFLTPSRFEGLVNPKR 77
T FE + P +
Sbjct: 166 EVKT--WFEERLKPSK 179
>gi|147780512|emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]
Length = 1125
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/510 (47%), Positives = 310/510 (60%), Gaps = 64/510 (12%)
Query: 2 QISLSFEKFDEVLNGSKVSNVIWNQENDSALGSS--STQQLWTDKYKLCSLEEPDVQKKN 59
Q+ L E+F E L G KVS GSS ++LW DKYK SLEE V KK
Sbjct: 73 QMRLFCEEFGEGLTGFKVS-----------AGSSRCGGKELWVDKYKPRSLEELAVHKKK 121
Query: 60 VEHFLTPSRFEGLVNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFE 119
VE FE + R + G L + + I + G F ++
Sbjct: 122 VEEVTV--WFEKRLRTSR-VCFG------LLISTKIGNVVRIVKIFADTAGVFQGGLKWY 172
Query: 120 GLVNPDHDS-----ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKD 174
G+V+ H + A + + E P++ EE+
Sbjct: 173 GIVSRIHPADPDIWAQLNDDYDDAYYEPIIPKNAEEMC---------------------- 210
Query: 175 KFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL 234
N+LVITGQAGVGK+AT+ I SHLGARL EW+TP PTIWQE++HN +G+ YTSKL
Sbjct: 211 ----NLLVITGQAGVGKSATIHAIVSHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKL 266
Query: 235 DEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI 294
DEFE+FVER+R+YG PS GESKSS ILLIDDLPVTNG ++ RLR CL LL +ST I
Sbjct: 267 DEFESFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQI 326
Query: 295 PTAVVLTECGKADSVD--STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
PTA+++T+ GKADS D +TA+ EELQ L +AGA K+A NPIT+ SIK+TLSKICRQE
Sbjct: 327 PTAILITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQE 386
Query: 353 QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG---- 408
Q ++ +QIDL+A++SGGDIR AITSLQ+ LK DPML+LS S + +EK D
Sbjct: 387 QCGVTADQIDLIARSSGGDIRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKXDELNPL 446
Query: 409 HGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSR-LPLKMDA--- 464
GFS+ FGRDETLSLFHALGKFLHNKRE++N + Q+AF+V+++ + +PLKM
Sbjct: 447 DDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLDKIIPLKMTVLML 506
Query: 465 PEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
+ + H QARPV+DFLHEN LD + +
Sbjct: 507 QKGFFVKQHVQARPVVDFLHENV-LDFLSE 535
>gi|222624542|gb|EEE58674.1| hypothetical protein OsJ_10097 [Oryza sativa Japonica Group]
Length = 601
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/400 (46%), Positives = 258/400 (64%), Gaps = 21/400 (5%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KYKP SL EL+V +KKVE+V+ W +E+L K F LV+TGQAGVGK+AT
Sbjct: 84 TEELWVDKYKPHSLAELSVHKKKVEDVKKWLDEKLRAPKGTFGGWTLVLTGQAGVGKSAT 143
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
++ IA+ LG + EW P PT+W E++H +GL Y SKL+EFENFVE+IR+Y SP+
Sbjct: 144 IKAIAAELGVEICEWTAPVPTLWTEHLH-ANSGLGYISKLEEFENFVEKIRKYSLLSPTN 202
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G + I+LIDD+PVT+G+ +F RL +CL L++ST +PT + LT+ K+++ D+
Sbjct: 203 FGSQRKHTIILIDDIPVTSGKVSFARLGKCLTGLIQSTQVPTVISLTQYHKSENNDTAMW 262
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ E+L+S+L AGA K++ NP+T SIK+ L +IC+QE L+ + + +A +SGGDIR
Sbjct: 263 NSEDLESLLQSAGAHKISFNPVTVNSIKKILVRICKQEGSDLTDDLVHQIATSSGGDIRH 322
Query: 375 AITSLQFSSLKQDPMLNLSLSISK--PNFPEEKA-----DGHGGFSI---QFGRDETLSL 424
AI SLQ+ L LN +L+ + P + D +G S+ GRDETL+L
Sbjct: 323 AIMSLQYYCLNPR-RLNSALARTAILPGLKSGGSLVPGQDSYGCSSVIPTACGRDETLTL 381
Query: 425 FHALGKFLHNKRET--DNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDF 482
FHALGKFLHNKRET + V +D D+F +K+K R PLKMD PEKVLSQAHG+ R V DF
Sbjct: 382 FHALGKFLHNKRETYSEVDVAVDVDSFPMKEKLRRNPLKMDIPEKVLSQAHGKVRTVADF 441
Query: 483 LHENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLGG 522
LHEN LD + + + L E CLL G
Sbjct: 442 LHENV-LDFIDNDAIDDAWSVASYLSE------ADCLLAG 474
>gi|108707108|gb|ABF94903.1| Cell cycle checkpoint protein RAD17, putative [Oryza sativa
Japonica Group]
Length = 643
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/406 (46%), Positives = 260/406 (64%), Gaps = 21/406 (5%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A + T++LW +KYKP SL EL+V +KKVE+V+ W +E+L K F LV+TGQAG
Sbjct: 120 AGSICQTEELWVDKYKPHSLAELSVHKKKVEDVKKWLDEKLRAPKGTFGGWTLVLTGQAG 179
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
VGK+AT++ IA+ LG + EW P PT+W E++H +GL Y SKL+EFENFVE+IR+Y
Sbjct: 180 VGKSATIKAIAAELGVEICEWTAPVPTLWTEHLH-ANSGLGYISKLEEFENFVEKIRKYS 238
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
SP+ G + I+LIDD+PVT+G+ +F RL +CL L++ST +PT + LT+ K+++
Sbjct: 239 LLSPTNFGSQRKHTIILIDDIPVTSGKVSFARLGKCLTGLIQSTQVPTVISLTQYHKSEN 298
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
D+ + E+L+S+L AGA K++ NP+T SIK+ L +IC+QE L+ + + +A +S
Sbjct: 299 NDTAMWNSEDLESLLQSAGAHKISFNPVTVNSIKKILVRICKQEGSDLTDDLVHQIATSS 358
Query: 369 GGDIRQAITSLQFSSLKQDPMLNLSLSISK--PNFPEEKA-----DGHGGFSI---QFGR 418
GGDIR AI SLQ+ L LN +L+ + P + D +G S+ GR
Sbjct: 359 GGDIRHAIMSLQYYCLNPR-RLNSALARTAILPGLKSGGSLVPGQDSYGCSSVIPTACGR 417
Query: 419 DETLSLFHALGKFLHNKRET--DNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQA 476
DETL+LFHALGKFLHNKRET + V +D D+F +K+K R PLKMD PEKVLSQAHG+
Sbjct: 418 DETLTLFHALGKFLHNKRETYSEVDVAVDVDSFPMKEKLRRNPLKMDIPEKVLSQAHGKV 477
Query: 477 RPVLDFLHENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLGG 522
R V DFLHEN LD + + + L E CLL G
Sbjct: 478 RTVADFLHENV-LDFIDNDAIDDAWSVASYLSE------ADCLLAG 516
>gi|357120217|ref|XP_003561825.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Brachypodium
distachyon]
Length = 616
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/410 (46%), Positives = 252/410 (61%), Gaps = 22/410 (5%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KY+P SL ELAV +KKVE+V+ W EE+L K LV+TGQAGVGK+AT
Sbjct: 103 TKELWVDKYRPHSLAELAVHKKKVEDVKKWLEEKLMAPKGTHGGWSLVLTGQAGVGKSAT 162
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
V+ IA+ +GA + EW TP PT+W E+MH +GL+Y SKL+EFENFVE+IR++ P+
Sbjct: 163 VKAIAAEIGADMCEWTTPVPTLWAEHMH-ASSGLQYVSKLEEFENFVEKIRKFSLLFPTT 221
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G + I LIDD+PVT+G + RL +CL L++ST IPT + LT K+++ D+
Sbjct: 222 IGSQRKLIIALIDDIPVTSGNASLARLGKCLTSLIQSTQIPTVISLTHYHKSEANDTAMW 281
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ EEL+S+L AGA K+ NP+T SIK+ L +IC+QE S + E + +A + GGDIR
Sbjct: 282 NSEELESLLQRAGAHKIVFNPVTISSIKKILFRICKQESSSTTEELVHEIATSCGGDIRH 341
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEK----ADGHGGFSIQ------FGRDETLSL 424
AI SLQ+ L LN +L+ S A G +S GRDETL+L
Sbjct: 342 AIMSLQYYCLNPR-RLNSALATSATLLESTGFGALAQGQDCYSRSSSMPSPCGRDETLTL 400
Query: 425 FHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLH 484
FHALGKFLHNKRE+ V +D D+F +K+K R PLKMD PE +LSQAHG+ R V DFLH
Sbjct: 401 FHALGKFLHNKRESHGDVNIDLDSFPLKEKLRRNPLKMDVPEMILSQAHGKVRTVADFLH 460
Query: 485 ENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLGGMLFVSQSSGEWT 534
EN LD + + + L E CLL G +S WT
Sbjct: 461 ENA-LDFIDDDAVDDAWVVMSYLSE------ADCLLAGSPI---TSARWT 500
>gi|255577520|ref|XP_002529638.1| cell cycle checkpoint protein rad17, putative [Ricinus communis]
gi|223530864|gb|EEF32725.1| cell cycle checkpoint protein rad17, putative [Ricinus communis]
Length = 439
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/266 (63%), Positives = 206/266 (77%), Gaps = 6/266 (2%)
Query: 227 GLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL 286
G+ YTSKLDEF NF+E+IR+YG PS ESKS +LLIDDLPV NGR AFERL+ CLL
Sbjct: 13 GVNYTSKLDEFMNFIEKIRKYGLI-PSFSAESKSPVMLLIDDLPVANGRAAFERLQNCLL 71
Query: 287 LLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLS 346
LLVRST +PTA++LT+ GK DS D +A+ EEL L AGA KVA NPIT+ SIK+ L+
Sbjct: 72 LLVRSTQVPTAILLTDYGKEDSADYSARYMEELLQSLERAGACKVAFNPITSSSIKKVLT 131
Query: 347 KICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM-LNLSLSISKPNFPEEK 405
+IC+Q+Q++++ EQI+L+A+ASGGDIR AITSLQ S+K D M SLS P++ + +
Sbjct: 132 RICKQKQHNVTAEQIELIAKASGGDIRHAITSLQLFSVKPDIMLSLSSLSTLTPSYSDGR 191
Query: 406 ADG----HGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLK 461
AD GFS+ FGRDETLSLFHALGKFLHNKRET+ DQDAF+V+DKFSRLPLK
Sbjct: 192 ADEINALTSGFSLLFGRDETLSLFHALGKFLHNKRETEAPSVFDQDAFLVRDKFSRLPLK 251
Query: 462 MDAPEKVLSQAHGQARPVLDFLHENC 487
MDAPEK+L QAHGQARP+ DFLHEN
Sbjct: 252 MDAPEKILCQAHGQARPIADFLHENV 277
>gi|226532638|ref|NP_001146613.1| uncharacterized protein LOC100280210 [Zea mays]
gi|219888029|gb|ACL54389.1| unknown [Zea mays]
Length = 614
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/363 (49%), Positives = 237/363 (65%), Gaps = 14/363 (3%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KY P SL ELAV +KK+E+V+ W EE+L K LV+TGQ GVGK+AT
Sbjct: 99 TKELWVDKYTPHSLAELAVHKKKIEDVKKWMEEKLKAPKATVGGWTLVLTGQTGVGKSAT 158
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
VR IA LGA L EW TP PT+W E++H +GL YTSKL+EFE FVE+IR+Y P+
Sbjct: 159 VRAIADDLGADLCEWTTPVPTLWAEHVH-ANSGLRYTSKLEEFETFVEKIRKYSMLCPTN 217
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ I+LIDD+PVT+G AF RL +CL L+RST +PT + LT K++S D+
Sbjct: 218 TRSQRNLIIILIDDIPVTSGNVAFARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMW 277
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ E+L+S+L DAGA K+ NP+T SIK+ L ++C++E S E + +A +SGGDIR
Sbjct: 278 NSEDLESLLQDAGAHKIGFNPVTTNSIKKILVRVCKEESCHASEELLHQIATSSGGDIRH 337
Query: 375 AITSLQFSSLKQDPMLNLSLSISK-----PNFPEEKADGHGGFSIQ------FGRDETLS 423
AI SLQ+ L DP + S + P + GH + GRDETLS
Sbjct: 338 AIMSLQYYCL--DPRRHSSALATSSSSTVPKNLDSLVPGHESYGPSSALPSPCGRDETLS 395
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL 483
LFHALGKFLHNKRET++ +D D+F +K+ R LKMD PEK+LSQAHG+ R V+DFL
Sbjct: 396 LFHALGKFLHNKRETNSDADIDLDSFPLKENLRRNALKMDVPEKILSQAHGKVRTVVDFL 455
Query: 484 HEN 486
+EN
Sbjct: 456 YEN 458
>gi|242041589|ref|XP_002468189.1| hypothetical protein SORBIDRAFT_01g041380 [Sorghum bicolor]
gi|241922043|gb|EER95187.1| hypothetical protein SORBIDRAFT_01g041380 [Sorghum bicolor]
Length = 617
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/363 (49%), Positives = 235/363 (64%), Gaps = 14/363 (3%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KY P SL ELAV +KK+E+V+ W EE+L K LV+TGQ GVGK+AT
Sbjct: 103 TKELWVDKYTPHSLAELAVHKKKIEDVKKWLEEKLKAPKTTVGGWTLVLTGQTGVGKSAT 162
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
V+ IA LGA L EW TP PT+W E++H +GL Y SKL+EFE FVE+IR+Y P+
Sbjct: 163 VKAIADDLGADLCEWTTPVPTLWAEHVH-ANSGLRYISKLEEFETFVEKIRKYSMLCPTN 221
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
+ I+LIDD+PVT+G +F RL +CL LVRST +PT + LT K+++ D+
Sbjct: 222 TKSQRKLIIILIDDIPVTSGSGSFARLGKCLTGLVRSTQVPTVISLTHYHKSENNDTAMW 281
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E+L+S+L DAGA K+A NP+T SIK+ L +IC++E + S E + +A +SGGDIR
Sbjct: 282 KSEDLESLLQDAGAHKIAFNPVTTNSIKKILVRICKEESCNASEELLHQMATSSGGDIRH 341
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD-----GHGGFSIQ------FGRDETLS 423
AI SLQ+ L DP + S + N K+ GH + GRDETLS
Sbjct: 342 AIMSLQYYCL--DPRRHSSALATSSNRTGSKSHDSLVPGHESYGPSSALPSPCGRDETLS 399
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL 483
LFHALGKFLHNKRET++ V D D F +K+ R LKMD PEK+LSQAHG+ R V DFL
Sbjct: 400 LFHALGKFLHNKRETNSDVGTDLDPFPLKENLRRNSLKMDVPEKILSQAHGKVRTVADFL 459
Query: 484 HEN 486
+EN
Sbjct: 460 YEN 462
>gi|297600631|ref|NP_001049521.2| Os03g0242100 [Oryza sativa Japonica Group]
gi|255674357|dbj|BAF11435.2| Os03g0242100 [Oryza sativa Japonica Group]
Length = 572
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/395 (44%), Positives = 246/395 (62%), Gaps = 21/395 (5%)
Query: 140 AEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIA 199
AE+ + R+ KVE+V+ W +E+L K F LV+TGQAGVGK+AT++ IA
Sbjct: 60 AERGRRRATGAAPSGSLKVEDVKKWLDEKLRAPKGTFGGWTLVLTGQAGVGKSATIKAIA 119
Query: 200 SHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESK 259
+ LG + EW P PT+W E++H +GL Y SKL+EFENFVE+IR+Y SP+ G +
Sbjct: 120 AELGVEICEWTAPVPTLWTEHLH-ANSGLGYISKLEEFENFVEKIRKYSLLSPTNFGSQR 178
Query: 260 SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEEL 319
I+LIDD+PVT+G+ +F RL +CL L++ST +PT + LT+ K+++ D+ + E+L
Sbjct: 179 KHTIILIDDIPVTSGKVSFARLGKCLTGLIQSTQVPTVISLTQYHKSENNDTAMWNSEDL 238
Query: 320 QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSL 379
+S+L AGA K++ NP+T SIK+ L +IC+QE L+ + + +A +SGGDIR AI SL
Sbjct: 239 ESLLQSAGAHKISFNPVTVNSIKKILVRICKQEGSDLTDDLVHQIATSSGGDIRHAIMSL 298
Query: 380 QFSSLKQDPMLNLSLSISK--PNFPEEKA-----DGHGGFSI---QFGRDETLSLFHALG 429
Q+ L LN +L+ + P + D +G S+ GRDETL+LFHALG
Sbjct: 299 QYYCLNPR-RLNSALARTAILPGLKSGGSLVPGQDSYGCSSVIPTACGRDETLTLFHALG 357
Query: 430 KFLHNKRET--DNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENC 487
KFLHNKRET + V +D D+F +K+K R PLKMD PEKVLSQAHG+ R V DFLHEN
Sbjct: 358 KFLHNKRETYSEVDVAVDVDSFPMKEKLRRNPLKMDIPEKVLSQAHGKVRTVADFLHENV 417
Query: 488 WLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLGG 522
LD + + + L E CLL G
Sbjct: 418 -LDFIDNDAIDDAWSVASYLSE------ADCLLAG 445
>gi|194706734|gb|ACF87451.1| unknown [Zea mays]
Length = 598
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 228/363 (62%), Gaps = 30/363 (8%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KY P SL ELAV +KK V W LV+TGQ GVGK+AT
Sbjct: 99 TKELWVDKYTPHSLAELAVHKKKAT-VGGW---------------TLVLTGQTGVGKSAT 142
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
VR IA LGA L EW TP PT+W E++H +GL YTSKL+EFE FVE+IR+Y P+
Sbjct: 143 VRAIADDLGADLCEWTTPVPTLWAEHVH-ANSGLRYTSKLEEFETFVEKIRKYSMLCPTN 201
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ I+LIDD+PVT+G AF RL +CL L+RST +PT + LT K++S D+
Sbjct: 202 TRSQRNLIIILIDDIPVTSGNVAFARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMW 261
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ E+L+S+L DAGA K+ NP+T SIK+ L ++C++E S E + +A +SGGDIR
Sbjct: 262 NSEDLESLLQDAGAHKIGFNPVTTNSIKKILVRVCKEESCHASEELLHQIATSSGGDIRH 321
Query: 375 AITSLQFSSLKQDPMLNLSLSISK-----PNFPEEKADGHGGFSIQ------FGRDETLS 423
AI SLQ+ L DP + S + P + GH + GRDETLS
Sbjct: 322 AIMSLQYYCL--DPRRHSSALATSSSSTVPKNLDSLVPGHESYGPSSALPSPCGRDETLS 379
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL 483
LFHALGKFLHNKRET++ +D D+F +K+ R LKMD PEK+LSQAHG+ R V+DFL
Sbjct: 380 LFHALGKFLHNKRETNSDADIDLDSFPLKENLRRNALKMDVPEKILSQAHGKVRTVVDFL 439
Query: 484 HEN 486
+EN
Sbjct: 440 YEN 442
>gi|218192418|gb|EEC74845.1| hypothetical protein OsI_10706 [Oryza sativa Indica Group]
Length = 403
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/320 (47%), Positives = 213/320 (66%), Gaps = 12/320 (3%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A + T++LW +KYKP SL EL+V +KKVE+V+ W EE+L K F LV+TGQAG
Sbjct: 78 AGSICQTEELWVDKYKPHSLAELSVHKKKVEDVKKWLEEKLRAPKGTFGGWTLVLTGQAG 137
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
VGK+AT++ IA+ LG + EW P PT+W E++H +GL Y SKL+EFENFVE+IR+Y
Sbjct: 138 VGKSATIKAIAAELGVEICEWTAPVPTLWTEHLH-ANSGLGYISKLEEFENFVEKIRKYS 196
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
SP+ G + I+LIDD+PVT+G+ +F RL +CL L++ST +PT + LT+ K+++
Sbjct: 197 LLSPTNFGSQRKHTIILIDDIPVTSGKVSFARLGKCLTGLIQSTQVPTVISLTQYHKSEN 256
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
D+ + E+L+S+L AGA K++ NP+T SIK+ L +IC+QE L+ + + +A +S
Sbjct: 257 NDTAMWNSEDLESLLQSAGAHKISFNPVTVNSIKKILVRICKQEGSDLTDDLVHQIATSS 316
Query: 369 GGDIRQAITSLQFSSLKQDPMLNLSLSISK--PNFPEEKA-----DGHGGFSI---QFGR 418
GGDIR AI SLQ+ L LN +L+ + P + D +G S+ GR
Sbjct: 317 GGDIRHAIMSLQYYCLNPR-RLNSALARTAILPGLKSGGSLVPGQDSYGCSSVIPTACGR 375
Query: 419 DETLSLFHALGKFLHNKRET 438
DETL+LFHALGKFLHNKRET
Sbjct: 376 DETLTLFHALGKFLHNKRET 395
>gi|413956384|gb|AFW89033.1| hypothetical protein ZEAMMB73_227199 [Zea mays]
Length = 426
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/330 (47%), Positives = 211/330 (63%), Gaps = 14/330 (4%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KY P SL ELAV +KK+E+V+ W EE+L K LV+TGQ GVGK+AT
Sbjct: 99 TKELWVDKYTPHSLAELAVHKKKIEDVKKWMEEKLKAPKATVGGWTLVLTGQTGVGKSAT 158
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
VR IA LGA L EW TP PT+W E++H +GL YTSKL+EFE FVE+IR+Y P+
Sbjct: 159 VRAIADDLGADLCEWTTPVPTLWAEHVH-ANSGLRYTSKLEEFETFVEKIRKYSMLCPTN 217
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ I+LIDD+PVT+G AF RL +CL L+RST +PT + LT K++S D+
Sbjct: 218 TRSQRNLIIILIDDIPVTSGNVAFARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMW 277
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ E+L+S+L DAGA K+ NP+T SIK+ L ++C++E S E + +A +SGGDIR
Sbjct: 278 NSEDLESLLQDAGAHKIGFNPVTTNSIKKILVRVCKEESCHASEELLHQIATSSGGDIRH 337
Query: 375 AITSLQFSSLKQDPMLNLSLSISK-----PNFPEEKADGHGGFSIQ------FGRDETLS 423
AI SLQ+ L DP + S + P + GH + GRDETLS
Sbjct: 338 AIMSLQYYCL--DPRRHSSALATSSSSTVPKNLDSLVPGHESYGPSSALPSPCGRDETLS 395
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKD 453
LFHALGKFLHNKRET++ +D D+ +K+
Sbjct: 396 LFHALGKFLHNKRETNSDADIDLDSCPLKE 425
>gi|413956383|gb|AFW89032.1| hypothetical protein ZEAMMB73_227199 [Zea mays]
Length = 418
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 204/317 (64%), Gaps = 14/317 (4%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KY P SL ELAV +KK+E+V+ W EE+L K LV+TGQ GVGK+AT
Sbjct: 99 TKELWVDKYTPHSLAELAVHKKKIEDVKKWMEEKLKAPKATVGGWTLVLTGQTGVGKSAT 158
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
VR IA LGA L EW TP PT+W E++H +GL YTSKL+EFE FVE+IR+Y P+
Sbjct: 159 VRAIADDLGADLCEWTTPVPTLWAEHVH-ANSGLRYTSKLEEFETFVEKIRKYSMLCPTN 217
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ I+LIDD+PVT+G AF RL +CL L+RST +PT + LT K++S D+
Sbjct: 218 TRSQRNLIIILIDDIPVTSGNVAFARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMW 277
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ E+L+S+L DAGA K+ NP+T SIK+ L ++C++E S E + +A +SGGDIR
Sbjct: 278 NSEDLESLLQDAGAHKIGFNPVTTNSIKKILVRVCKEESCHASEELLHQIATSSGGDIRH 337
Query: 375 AITSLQFSSLKQDPMLNLSLSISK-----PNFPEEKADGHGGFSIQ------FGRDETLS 423
AI SLQ+ L DP + S + P + GH + GRDETLS
Sbjct: 338 AIMSLQYYCL--DPRRHSSALATSSSSTVPKNLDSLVPGHESYGPSSALPSPCGRDETLS 395
Query: 424 LFHALGKFLHNKRETDN 440
LFHALGKFLHNKRET++
Sbjct: 396 LFHALGKFLHNKRETNS 412
>gi|413956381|gb|AFW89030.1| hypothetical protein ZEAMMB73_227199 [Zea mays]
Length = 410
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 202/330 (61%), Gaps = 30/330 (9%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T++LW +KY P SL ELAV +KK V W LV+TGQ GVGK+AT
Sbjct: 99 TKELWVDKYTPHSLAELAVHKKKAT-VGGW---------------TLVLTGQTGVGKSAT 142
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
VR IA LGA L EW TP PT+W E++H +GL YTSKL+EFE FVE+IR+Y P+
Sbjct: 143 VRAIADDLGADLCEWTTPVPTLWAEHVH-ANSGLRYTSKLEEFETFVEKIRKYSMLCPTN 201
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ I+LIDD+PVT+G AF RL +CL L+RST +PT + LT K++S D+
Sbjct: 202 TRSQRNLIIILIDDIPVTSGNVAFARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMW 261
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ E+L+S+L DAGA K+ NP+T SIK+ L ++C++E S E + +A +SGGDIR
Sbjct: 262 NSEDLESLLQDAGAHKIGFNPVTTNSIKKILVRVCKEESCHASEELLHQIATSSGGDIRH 321
Query: 375 AITSLQFSSLKQDPMLNLSLSISK-----PNFPEEKADGHGGFSIQ------FGRDETLS 423
AI SLQ+ L DP + S + P + GH + GRDETLS
Sbjct: 322 AIMSLQYYCL--DPRRHSSALATSSSSTVPKNLDSLVPGHESYGPSSALPSPCGRDETLS 379
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKD 453
LFHALGKFLHNKRET++ +D D+ +K+
Sbjct: 380 LFHALGKFLHNKRETNSDADIDLDSCPLKE 409
>gi|168045026|ref|XP_001774980.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673727|gb|EDQ60246.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 501
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 214/383 (55%), Gaps = 26/383 (6%)
Query: 127 DSASASSSTQ-QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF-STNVLVIT 184
D+ A+S+ Q +LW E++ P+++ +L V KKV +V W + RL D + +L++T
Sbjct: 30 DAEPANSTAQSELWVERHAPKTVTDLVVHGKKVGDVHKWLKSRLHDPGWRVPGGQLLLLT 89
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G GVGK+ T+R + LG +EW TPTPT WQE++H+ TG YTSKLDEFE FVE
Sbjct: 90 GPPGVGKSTTIRVLGKSLGLEFFEWKTPTPTQWQEHVHHGFTGHRYTSKLDEFEAFVENA 149
Query: 245 RRYGSTSPSIPGES-----KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVV 299
R++ P +P ES + LLI+DLP N ++L LL LVRS T V+
Sbjct: 150 RKF----PVLPVESNMDSPRKVKALLIEDLPQVNDAAQTQQLCNLLLALVRSVCFITVVI 205
Query: 300 LTECGK-ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+T+ + ++ E+Q L AGA K+ NP+T SIKR L+KI E+ LS
Sbjct: 206 MTDVVEDGGGRNTRLWKHREVQQTLEGAGATKIVFNPVTANSIKRLLTKIAATEKCRLSG 265
Query: 359 EQIDLVAQASGGDIRQAITSLQF-------SSLKQDPMLNLSLSISKPNFPEEKADGHGG 411
+ I +A+ GGD+R AI++LQF +S + ++ + E+
Sbjct: 266 DYISAIAENCGGDLRHAISALQFQCTGHCLNSRNVKDIGAFEFGSARNSVLEDTVVRVAE 325
Query: 412 F------SIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDA 464
F S +GRD SLFHALGKFLHNKR TD ++ Q++ +V + + R PL M+
Sbjct: 326 FESGTSSSPTYGRDNIFSLFHALGKFLHNKRHTDQSLEATQESLLVLCEDYKRHPLNMEV 385
Query: 465 PEKVLSQAHGQARPVLDFLHENC 487
PE++LS+A + ++ FLHEN
Sbjct: 386 PERILSEAQIEFPSLVAFLHENV 408
>gi|302813288|ref|XP_002988330.1| hypothetical protein SELMODRAFT_427013 [Selaginella moellendorffii]
gi|300144062|gb|EFJ10749.1| hypothetical protein SELMODRAFT_427013 [Selaginella moellendorffii]
Length = 565
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 205/366 (56%), Gaps = 26/366 (7%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+ LW +K++P + +LAV KKV EVR W E ++ D+ S +L+ITG AGVGK
Sbjct: 61 SDNLWIDKFRPACVSDLAVHSKKVGEVRQWMETQI-DNPLGCSCKLLLITGPAGVGKKTV 119
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
VR +A+ + A L EW PTP +W+E++HN G +Y+SKL +FE F+++ ++ PS+
Sbjct: 120 VRVLANTMNAELCEWTAPTPVLWKEHLHNDTLGSKYSSKLKDFETFLDKTTKF----PSL 175
Query: 255 P--GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
P + +LIDD+P+ NG +L Q L L+ PT +V+T+ S+
Sbjct: 176 PLNAPVRRMKFVLIDDVPLVNGEDKKRQLLQSLRQLLAGAKFPTIIVVTDVADDGYRGSS 235
Query: 313 -AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
A+ E+ L GA K+A NPIT +IK+ L+ + + ++ + +E + +AQ + GD
Sbjct: 236 MARCMGEIVKTLESGGASKIAFNPITVNAIKKVLANLVKAKKCRVPSEMVAEIAQTAAGD 295
Query: 372 IRQAITSLQFSSLKQDPMLNLSLS----------ISKPNFPEEKADGHGGFSIQFGRDET 421
IR AI LQF L P + S S S P+E+ + + GRD
Sbjct: 296 IRHAILHLQFLCLNS-PKSDKSESRRRKRQQVRGASDDEPPKEQ------YGSKCGRDHI 348
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQD-AFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVL 480
LSLFHALGKFLHNKR D + + + ++ ++ R PL+M PE V+SQ+H +A ++
Sbjct: 349 LSLFHALGKFLHNKRVADAESESGEKLSCPLQQQYQRPPLQMKDPELVISQSHAEASTLV 408
Query: 481 DFLHEN 486
FLHEN
Sbjct: 409 SFLHEN 414
>gi|255070983|ref|XP_002507573.1| predicted protein [Micromonas sp. RCC299]
gi|226522848|gb|ACO68831.1| predicted protein [Micromonas sp. RCC299]
Length = 648
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 183/434 (42%), Gaps = 93/434 (21%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
++ L K RS ++ V +KK++ +R W + +S+ ++ +++ITG +G GK+A
Sbjct: 5 SKNLHLTKIPSRSEADIVVAKKKLDSIREW----ISNSEQPGASRIMLITGPSGSGKSAA 60
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
VR +A+ L+EW P PT+W+++ + YTSK+DEF F+ R RY +
Sbjct: 61 VRLVAAETNLELHEWCAPVPTLWEDFRYIDLPSASYTSKVDEFLAFIARAFRYSPLDLGL 120
Query: 255 P---GESKSSA----------ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLT 301
GE K LL+DDLP N ER+R L L+R T P V+T
Sbjct: 121 ETRVGEHKDKGEQVSKITRKKFLLVDDLPFVNNLQQSERVRTVLRQLMRQTMFPVIFVMT 180
Query: 302 ECGKADS---------VDSTAQSFEELQSILVD---------AGARKVALNPITNGSIKR 343
+ G+ + S + + +D AGA V+LNP+T +
Sbjct: 181 DAGRRKRTGVRSENGYLGSGETKYWCASPLSIDHCLSHELNLAGAVTVSLNPVTVPRLVN 240
Query: 344 TLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
LS I E + + +A ++ GDIR AITSLQF + QD N + +
Sbjct: 241 ALSVIAMNENLKVPHATLVDLAASAAGDIRSAITSLQFLA-SQDSEDNAH------HDKQ 293
Query: 404 EKADGHG------------------GFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMD 445
E A H G+S R + LS FHALGK LHNKR + +
Sbjct: 294 EHASKHADSSSAMNDTKDMSCLPAPGWSKLVQRHDVLSTFHALGKILHNKRMSGVCDNLR 353
Query: 446 QDAFVVKDKFSRLPLKMDA---------------------------------PEKVLSQA 472
+F + FS+ L+ D PE +LS +
Sbjct: 354 PHSFKIGKYFSKPFLETDTWGPELSGTTAQRKHLVTIMPVHPSLRREPTLYDPEMILSSS 413
Query: 473 HGQARPVLDFLHEN 486
A +DFL EN
Sbjct: 414 RLSAVSTIDFLFEN 427
>gi|145346338|ref|XP_001417646.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577874|gb|ABO95939.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 593
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 172/387 (44%), Gaps = 53/387 (13%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+ ++Y P L KK+E VRAW E L +G G GK + ++
Sbjct: 3 MLVDRYAPEDANALTTPTKKLEAVRAWLER----------GGALCASGPPGCGKASAIKC 52
Query: 198 IASHLGARLYEWDTPTPTIWQEYMH---NCKTGLEYTSKLDEFENFVERIRRY------- 247
+A G + EW PTPT+W+E+ H N G+EY SK+DEF +V R +Y
Sbjct: 53 VAKEFGYEVSEWKAPTPTLWREHAHARGNENYGIEYASKVDEFAAYVARATKYEPLSFLK 112
Query: 248 --------------GSTSPSIPGESKS-SAILLIDDLPVTNGRTAFERLRQCLLLLVRST 292
GS + + + KS +L++ D+P ++ L L
Sbjct: 113 PTTRGGNGARGARNGSANGTSTAKGKSRGVVLMVRDIPSSDESGRARVLEAIRTLTTARN 172
Query: 293 HIPTAVVLTECGKADSVDSTAQSFE----ELQSILVDAGARKVALNPITNGSIKRTLSKI 348
P AVVLTE ++ E ++++++ AGA + N T ++ +TL ++
Sbjct: 173 GPPCAVVLTEEDDGGGGGGSSSRGEILARDVRAVMEQAGATCINFNATTAAAMTKTLLRV 232
Query: 349 CRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ--------DPMLNLSLSISKPN 400
E + + +ID + QAS GD+R A+ +L+F + + +P
Sbjct: 233 REAEGFVIPDSEIDAIVQASHGDLRSALGALEFWCMGKTKPDAAKKPAKKAPKRKRGEPK 292
Query: 401 -FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLP 459
P E A S RD+ L LFHALGKFL+NKRET + M+ F D+ R P
Sbjct: 293 EAPSEAAVARAKMS---SRDQGLGLFHALGKFLYNKRETTEV--MEIKGFETMDESLRRP 347
Query: 460 LKMDAPEKVLSQAHGQARPVLDFLHEN 486
PE+VLS++ A + FL EN
Sbjct: 348 PARYDPEEVLSRSGIGAETAVGFLFEN 374
>gi|308803603|ref|XP_003079114.1| Kelch repeat:Kelch (ISS) [Ostreococcus tauri]
gi|116057569|emb|CAL53772.1| Kelch repeat:Kelch (ISS) [Ostreococcus tauri]
Length = 1055
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 183/389 (47%), Gaps = 49/389 (12%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
ASA SST L E + PR+L E +KKVE VRAW + L +G +G
Sbjct: 12 ASALSSTGTL-GETHAPRTLAECVAAKKKVERVRAWLAK----------GGALCASGPSG 60
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH----NCKTGLEYTSKLDEFENFVERI 244
GK + + A G + E+ TPT+W+E H + T +EY+SK+DEF + R
Sbjct: 61 CGKASAITCAAREFGYGVEEYAAATPTLWRERAHIENGDDGTRVEYSSKVDEFVAYCSRA 120
Query: 245 RRY-------------------GSTSPSIPGESKSSAILLIDDLPVT--NGRTAFERLRQ 283
+Y G + S+ K +LLI D+P + NGR R+ +
Sbjct: 121 TKYAPLALTLTSTKTNESDGRSGGGTTSMMASRK--VVLLIRDIPSSDANGRA---RVLE 175
Query: 284 CLLLLVRSTHIPTAVVLTEC----GKADSVDSTAQSFEELQSILVDAGARKVALNPITNG 339
L L S P V+ G S S S ++++S++ AGA+ V N T
Sbjct: 176 ALRALAASRGGPPVAVVVTEEEERGGHRSGRSAEISAKDVRSVMEKAGAQIVDFNAATTA 235
Query: 340 SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSIS-K 398
+I + L+++C E + +S ID + Q S GD+R A+ +L+F ++ + K
Sbjct: 236 AITKALTRVCELEHFDMSPSDIDAIVQNSHGDVRSALGALEFWCFGKNRTGRTAPPTKRK 295
Query: 399 PNFPEEKADG-HGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSR 457
P+E ++ RD+ L LFHALGKFL+NKR+T +L M+ F D+ R
Sbjct: 296 RGEPKEAPSAVASARALLSSRDQGLGLFHALGKFLYNKRDTHDL--MNIAGFETLDERLR 353
Query: 458 LPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
P + PE VL+++ A + FL EN
Sbjct: 354 RPPQRYDPEDVLARSGIGAETAVGFLFEN 382
>gi|328872989|gb|EGG21356.1| hypothetical protein DFA_01237 [Dictyostelium fasciculatum]
Length = 1444
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 21/355 (5%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKD--KFSTNVLVITGQAGVGKTAT 194
++W +KY P++ EELAV +KK+ EV+ W ++R + + K + +L++TGQ+G+GK+
Sbjct: 857 EIWIDKYSPKTEEELAVHKKKISEVKIWLQDRYNEMSNNTKLTEKMLILTGQSGIGKSTM 916
Query: 195 VRQIAS-HLGARLYEWDTPTP--TIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
++ + + + + EW + T QE C YT L+ F+ ++E R+
Sbjct: 917 IKVLVNCGMAFSIDEWINQSVEFTTDQENKGTCP----YTPPLEIFKTWLESAGRHDLFG 972
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+ G+ K ++LI++ P R + + P +++++ +S
Sbjct: 973 GNRGGKKK---MMLIEEFPNLATRDQEREFKSMFRKYIEVGKYPLVLIVSDLNSGNS--P 1027
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+ F+ + L + +K+ +N + ++ + L I + E +++ E +DL+ Q S GD
Sbjct: 1028 LHRLFDP--NFLSSSSIKKICINVVPPATMAKFLINIAKTEGFTVEQELVDLLVQESAGD 1085
Query: 372 IRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKF 431
IR AI +L+F + Q +L + +K GH S Q R+ LSLFH+LGK
Sbjct: 1086 IRAAINNLEFHCIGQTRVLPSTNKKEPKPKGRQKKPGHVNISQQ-QRNPNLSLFHSLGKI 1144
Query: 432 LHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
L+NKR + D + K ++ R P++ + PE V Q+ FLHEN
Sbjct: 1145 LYNKRIPK---QTDPNELWYKQEYYRDPME-NVPEDVFDQSQIDGSYYTMFLHEN 1195
>gi|156364923|ref|XP_001626593.1| predicted protein [Nematostella vectensis]
gi|156213475|gb|EDO34493.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 196/409 (47%), Gaps = 58/409 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
+LW EKYKP + ELAV +KKV EVR W E+L K S +L++TG G GKTAT+
Sbjct: 2 ELWIEKYKPTTEIELAVHKKKVAEVRCWLLEQL---TSKPSNAILLLTGPVGAGKTATIH 58
Query: 197 QIASHLGARLYEWDTPTPTI----WQEYMHNCKTG---LEYTSKLDEFENFVERIRRYGS 249
+ + L + EW P T + + + ++ + Y S+L +F+ F+ R +Y +
Sbjct: 59 MLQTELSFEIQEWINPLVTTDEVDYVKLVQCLRSNFNFMSYQSQLSQFKEFLLRANKYPT 118
Query: 250 TSP-SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
S ++K ++L++DLP R + ++ + L + P +++++ DS
Sbjct: 119 LSIFGTSTDAKPRKVILVEDLPNIFFRDS-KKFHEVLQSYQSAGRSPVVLIISDSHHGDS 177
Query: 309 VDSTAQSFEEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQE------QYSL-STE 359
+ L +S+ G ++ NPI S+ +TL++I E ++ L E
Sbjct: 178 ------NVHRLLPKSVQESLGVTSISFNPIARTSLVKTLNRIASSENQKAGREFVLPGKE 231
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSL--------SISKPNFPEE------K 405
I+ +AQ+S GDIR AI +LQFS L+ + NLSL S+ K ++ +
Sbjct: 232 AIEGLAQSSTGDIRTAINALQFSCLRGN---NLSLLKKTKSGTSVQKTSWQNRLSEDSSR 288
Query: 406 ADGHGG----FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLK 461
A G S GRD ++ LF ALGK L+ KR+ V D+D
Sbjct: 289 AGQDSGEPSVLSAIGGRDSSIFLFRALGKILYCKRDP---VTSDKDLLPPHLTHCARNTP 345
Query: 462 MDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQTMFYNLLRLQLLLVEY 510
PE+V +AH + + +LH+N +LD F+ L ++ +EY
Sbjct: 346 QFCPEEVAERAHLSSELLQLYLHQN-YLD------FFTDLDSVVIALEY 387
>gi|303274012|ref|XP_003056331.1| HIRA protein group [Micromonas pusilla CCMP1545]
gi|226462415|gb|EEH59707.1| HIRA protein group [Micromonas pusilla CCMP1545]
Length = 671
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 63/339 (18%)
Query: 150 ELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
++ V +KK++ +R W L + + + VL++ G AG GK+A +R +A+ ++ EW
Sbjct: 8 DIVVAKKKLDSLREW----LWNCRQPDAPQVLLMVGPAGSGKSAALRLVAAEAEIKIREW 63
Query: 210 DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY-------GSTSP-SIPGESKSS 261
+ P P +W+E+ H Y+SK+D+F +FV R +Y SP SIP S +S
Sbjct: 64 NAPVPMLWKEFKHMSALDTNYSSKVDDFGSFVARASKYSLLKLEASQISPSSIPFMSLNS 123
Query: 262 ----------AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE---CGKADS 308
ILL++D+P+ + + + L L R + PTA+V +E +
Sbjct: 124 EKEHRRHETDVILLVEDVPLRGSKEQQQHVLDLLQRLTRESRTPTAIVFSEEDLGSRIGE 183
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+ + + ++V AGAR ++ N T + + L+ I E+ + S ++ +A AS
Sbjct: 184 LQDYSIGISTVIRVMVSAGARYLSFNSSTVTRLVKALTSIAHAERLTFSPVELMEIAIAS 243
Query: 369 GGDIRQAITSLQF-------------------------------SSLKQDPMLNLSLSIS 397
GD+R AITSLQ S D + ++ L
Sbjct: 244 KGDVRCAITSLQLLACGVKGVSVQSKESHFALADMNRMKIKACASLAGDDDIRSVRLLEC 303
Query: 398 KPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ N K G F RD LS FHALGK L+NKR
Sbjct: 304 RDNL---KVSEKGNFC----RDHALSAFHALGKVLYNKR 335
>gi|449267836|gb|EMC78732.1| Cell cycle checkpoint protein RAD17, partial [Columba livia]
Length = 598
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 58/388 (14%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W ++YKP + +LAVQ+KK+EEV W + + + K +VL++TG G GKTAT++ +
Sbjct: 2 WVDRYKPETQSDLAVQKKKIEEVETWLKRHIFQRQPKQGGSVLLLTGPPGCGKTATIQIL 61
Query: 199 ASHLGARLYEWDTPTPTIWQE------YMHNCK-TGLEYTSKLDEFENFVERIRRYGSTS 251
A LG ++ EW P + + + H+ ++ F++F+ R +Y
Sbjct: 62 AKGLGVQVQEWTNPVSLDFTKEDLRNMFGHDSNFHTFPSQAQTALFQDFLLRANKYNKL- 120
Query: 252 PSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
+ GES + ++LI+D+P R L + L VR++ P ++++ DS
Sbjct: 121 -QMLGESSENDKKLILIEDIPNQFYRDP-SSLHEILRRFVRTSRCPLIFIISDNFSGDSN 178
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC-------RQEQYSLSTEQID 362
E L+ + + ++ PI ++ + L++I R++ Y+L ++
Sbjct: 179 QRLLFPTEILEELCIS----NISFKPIAPTNMMKVLNRIAATEASMNREKNYALDRTSLE 234
Query: 363 LVAQASGGDIRQAITSLQFSSL-------------KQDPMLNLSLSISKPNFPEEKADGH 409
L+ + GDIR AI SLQFSS+ K+ L S + K+D
Sbjct: 235 LLCRGCSGDIRSAINSLQFSSMKDCSLEEEFWSRKKRSSTLKCKASTVSKVGKKSKSDTS 294
Query: 410 GGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDA--- 464
IQ G+D ++ LFHALGK ++ KR+ V +F +LP +
Sbjct: 295 EDKEIQAIGGKDASIFLFHALGKIIYCKRDP-----------VSDSEFPQLPAHLSEYRR 343
Query: 465 ------PEKVLSQAHGQARPVLDFLHEN 486
PE ++ ++H +LH+N
Sbjct: 344 DTLLIQPEDIVEKSHMSESMFNLYLHQN 371
>gi|281206782|gb|EFA80967.1| hypothetical protein PPL_06202 [Polysphondylium pallidum PN500]
Length = 1011
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 184/364 (50%), Gaps = 33/364 (9%)
Query: 132 SSSTQQLWAEKYKPRSLEE--LAVQRKKVEEVRAWFEERLGDSKDK--FSTNVLVITGQA 187
+S + W EKY+P++ ++ L + RKKV+EV+ WF++R + + + +L++TG A
Sbjct: 414 NSKDSRAWTEKYEPKTEDDIRLTIHRKKVDEVKQWFQDRSNEISNGTLITQKMLIMTGPA 473
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV---ERI 244
GVGKTA R A+ G L EW P I ++ + K Y +L+ F++++ ER
Sbjct: 474 GVGKTALTRVFANQFGFNLEEWTNPVMDIVKD--KDDKVVSYYKPQLEIFKSWLKSNERC 531
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
+G ++ G+ K +L+I++ P R+ + +R T P + ++
Sbjct: 532 DLFG----NVLGKKK---LLIIEETPNVQSPGILAEFREGMKQFLRRTIFPLIFIYSDSS 584
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
A++ S + +LQ+ ++ + ++ NPI ++ + L I E +++ +QI+ +
Sbjct: 585 VANTNLSKIFDY-QLQN---NSLTQHISFNPIAPVTLFKYLKDISITEGFNIEDDQIESI 640
Query: 365 AQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF--GRDETL 422
SGGDIR +I SL+F + + + I KP ++A + RD+++
Sbjct: 641 RLESGGDIRASINSLEFHCIGK-----VRQVIVKPK-KSKRATNTTKTTTSTPKNRDQSI 694
Query: 423 SLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDF 482
SLFH+LGK L+NKR D L K + +D++ R ++ + PE+ +H F
Sbjct: 695 SLFHSLGKVLYNKRIPDTLPKDEW----YRDEYLREKMESN-PEQSFENSHVDGNMFTMF 749
Query: 483 LHEN 486
L EN
Sbjct: 750 LQEN 753
>gi|327263016|ref|XP_003216317.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Anolis
carolinensis]
Length = 679
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 177/388 (45%), Gaps = 57/388 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
+ W +KYKP+ +ELAV +KK+EEV AW + + + K ++L++TG G GK+ATV
Sbjct: 88 ETWVDKYKPQIQDELAVHKKKIEEVEAWLKSHIFQRQTKQGGSILLLTGPPGCGKSATVE 147
Query: 197 QIASHLGARLYEWDTPTPTIWQE----YMHNCKTGL-EYTSKLDEFENFVERIRRYGSTS 251
+A LG ++ EW TP + + Y N + Y S+ F+ F+ R +Y
Sbjct: 148 ILAKDLGVQVQEWTTPISLDFTKDDFHYALNHEADFPPYQSQTALFQEFLFRANKYPRL- 206
Query: 252 PSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
+ GES + ++L++D+P R L + L VR+ P ++++ S
Sbjct: 207 -HMVGESIGTERKLILVEDMPNQLCRDP-GSLHEILRSFVRTGKYPLVFIISDSFSGASN 264
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ--------I 361
+ E + + + ++ NP+ + + LS+I E S S E+ +
Sbjct: 265 QRSLFPKEVQEELCIS----NISFNPVAPTMMMKVLSRITALEN-SKSREKNDIPDKGAL 319
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPN-------FPEEKADGHGGFSI 414
+L+ + GDIR AI SLQFSSLK+ N+ S K N + K G +
Sbjct: 320 ELICKGCSGDIRSAINSLQFSSLKEYSSENIIWSQRKENSTLKCDTLSKVKKKKKSGNPL 379
Query: 415 QF-------GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMD---- 463
+ G+D +L LFHALGK L+ KRE + F +LP +
Sbjct: 380 EIQEIQAIGGKDASLFLFHALGKILYCKREP-----------TTEPGFPQLPPHLSEYER 428
Query: 464 -----APEKVLSQAHGQARPVLDFLHEN 486
PE V+ ++H +LH+N
Sbjct: 429 NHLLVEPEDVIEKSHMPGDLFNLYLHQN 456
>gi|410267620|gb|JAA21776.1| RAD17 homolog [Pan troglodytes]
gi|410307510|gb|JAA32355.1| RAD17 homolog [Pan troglodytes]
gi|410307512|gb|JAA32356.1| RAD17 homolog [Pan troglodytes]
gi|410307514|gb|JAA32357.1| RAD17 homolog [Pan troglodytes]
gi|410337493|gb|JAA37693.1| RAD17 homolog [Pan troglodytes]
Length = 670
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 215/513 (41%), Gaps = 83/513 (16%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ FE F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFEEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
++DLP + T +E LR+ VR P ++++ D+ Q + I
Sbjct: 214 VEDLPNQFYRDSHTLYEVLRK----YVRIGRCPLIFIISDSLSGDN----NQRLLFPKEI 265
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQA 375
+ ++ NP+ + + L++I E + ++L+ Q GDIR A
Sbjct: 266 QEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSA 325
Query: 376 ITSLQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGR 418
I SLQFS SLK D +L+ S KP+ F ++ G G+
Sbjct: 326 INSLQFSSSKGENNLRPTKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GK 379
Query: 419 DETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQAR 477
D +L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 380 DVSLFLFRALGKILYCKRAS--LTELDSPQLPSHLSEYERDTLLVE-PEEVVEMSHMPGD 436
Query: 478 PVLDFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI---------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 437 LFNLYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNK 496
Query: 515 ---LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 497 ARGYAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|326935328|ref|XP_003213725.1| PREDICTED: cell cycle checkpoint protein RAD17-like, partial
[Meleagris gallopavo]
Length = 673
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 189/412 (45%), Gaps = 59/412 (14%)
Query: 116 SRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDK 175
++F + P + S + S + W +KYKP + +LAVQ+KK+EEV W + + + K
Sbjct: 59 AKFSSVDLPRNKSRLRNQSQDEPWVDKYKPETQNDLAVQKKKIEEVETWLKMHIFRRQPK 118
Query: 176 FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE------YMHNCKT-GL 228
VL++TG AG GKTATV+ +A LG ++ EW P + + HN +
Sbjct: 119 QGGCVLLLTGPAGCGKTATVQILARDLGVQVQEWTNPISLDFTKEDLRNISGHNSNSHAF 178
Query: 229 EYTSKLDEFENFVERIRRYGSTSPSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLL 286
++ F++F+ R +Y + GES + ++L++D+P R L + L
Sbjct: 179 PSQTQAALFQDFLLRANKYNKL--QMLGESSENDKKLILVEDMPNQFYRDP-SSLHEILR 235
Query: 287 LLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLS 346
VR++ P ++++ DS E L+ + + ++ P+ ++ + L+
Sbjct: 236 RFVRTSRCPLIFIISDNFSGDSNQRLLFPKEILEELCISI----ISFKPVAPTNMMKVLN 291
Query: 347 KIC-------RQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM---------- 389
+I R++ Y+ ++L+ + GDIR AI SLQF S+K +
Sbjct: 292 RIATVEANMNREKNYAPDRTSLELLCRGCSGDIRSAINSLQFFSMKDCSLEKDFWSRKKW 351
Query: 390 ---LNLSLSISKPNF-PEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVK 443
L + + N + K+D +IQ G+D ++ LFHALGK ++ KRE
Sbjct: 352 SSTLKSKTTAAVCNLRKKNKSDILEDQAIQAIGGKDASIFLFHALGKIIYCKREP----- 406
Query: 444 MDQDAFVVKDKFSRLPLK---------MDAPEKVLSQAHGQARPVLDFLHEN 486
V + +F +LP + PE ++ ++H +LH+N
Sbjct: 407 ------VSESEFPQLPSHLLEHRRDTLLIHPEDIVEKSHMSGSMFNLYLHQN 452
>gi|332821279|ref|XP_001158903.2| PREDICTED: cell cycle checkpoint protein RAD17 isoform 2 [Pan
troglodytes]
gi|397470422|ref|XP_003806821.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 1 [Pan
paniscus]
gi|397470424|ref|XP_003806822.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 2 [Pan
paniscus]
gi|397470426|ref|XP_003806823.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 3 [Pan
paniscus]
gi|397470428|ref|XP_003806824.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 4 [Pan
paniscus]
gi|397470430|ref|XP_003806825.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 5 [Pan
paniscus]
gi|410039281|ref|XP_003950584.1| PREDICTED: cell cycle checkpoint protein RAD17 [Pan troglodytes]
gi|410039283|ref|XP_003950585.1| PREDICTED: cell cycle checkpoint protein RAD17 [Pan troglodytes]
gi|410039285|ref|XP_003950586.1| PREDICTED: cell cycle checkpoint protein RAD17 [Pan troglodytes]
gi|410039287|ref|XP_003950587.1| PREDICTED: cell cycle checkpoint protein RAD17 [Pan troglodytes]
gi|410212892|gb|JAA03665.1| RAD17 homolog [Pan troglodytes]
Length = 670
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ FE F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFEEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPTKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPQLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|397470432|ref|XP_003806826.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 6 [Pan
paniscus]
gi|410039289|ref|XP_003950588.1| PREDICTED: cell cycle checkpoint protein RAD17 [Pan troglodytes]
Length = 681
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 50 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 164
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ FE F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFEEFLLRATKYNKLQMLGDDLRTDKKIIL 224
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 225 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 279
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 280 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 339
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 340 LQFSSSKGENNLRPTKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 393
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 394 LFLFRALGKILYCKRAS--LTELDSPQLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 450
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 451 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 510
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 511 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 540
>gi|380789767|gb|AFE66759.1| cell cycle checkpoint protein RAD17 isoform 1 [Macaca mulatta]
gi|383410639|gb|AFH28533.1| cell cycle checkpoint protein RAD17 isoform 1 [Macaca mulatta]
Length = 670
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSKFPARKRGNLSSLEQIYGLEN-----SKESLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKVLSKEHGIQVQEWINP 153
Query: 213 TPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q+ + N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFREIFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P V+++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFVISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITIPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLWPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+++ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEIVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRLQ-------LLLVEYYLEI------------- 514
+LH+N DI+R + F + + LL EY I
Sbjct: 440 LYLHQNYIDFFMDIDDIVRASEFLSFADILSGDWNTCSLLREYSTSIATRGVIHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLIYKKYRENC 529
>gi|109077491|ref|XP_001092933.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 6 [Macaca
mulatta]
gi|109077493|ref|XP_001093049.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 7 [Macaca
mulatta]
gi|109077495|ref|XP_001093158.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 8 [Macaca
mulatta]
gi|109077499|ref|XP_001093374.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 10 [Macaca
mulatta]
gi|109077501|ref|XP_001093481.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 11 [Macaca
mulatta]
Length = 670
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSKFPARKRGNLSSLEQIYGLEN-----SKESLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKVLSKEHGIQVQEWINP 153
Query: 213 TPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q+ + N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFREIFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P V+++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFVISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLWPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+++ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEIVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRLQ-------LLLVEYYLEI------------- 514
+LH+N DI+R + F + + LL EY I
Sbjct: 440 LYLHQNYIDFFMDIDDIVRASEFLSFADILSGDWNTCSLLREYSTSIATRGVIHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLIYKKYRENC 529
>gi|402871748|ref|XP_003899813.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 1 [Papio
anubis]
gi|402871750|ref|XP_003899814.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 2 [Papio
anubis]
gi|402871752|ref|XP_003899815.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 3 [Papio
anubis]
gi|402871754|ref|XP_003899816.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 4 [Papio
anubis]
gi|402871756|ref|XP_003899817.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 5 [Papio
anubis]
Length = 670
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 189/426 (44%), Gaps = 51/426 (11%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSKFPARKRGNLSSLEQIYGLEN-----SKESLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKVLSKEHGIQVQEWINP 153
Query: 213 TPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q+ + N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFREIFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P V+++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFVISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLWPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+++ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEIVEMSHMPGDLFN 439
Query: 481 DFLHEN 486
+LH+N
Sbjct: 440 LYLHQN 445
>gi|195997141|ref|XP_002108439.1| hypothetical protein TRIADDRAFT_18196 [Trichoplax adhaerens]
gi|190589215|gb|EDV29237.1| hypothetical protein TRIADDRAFT_18196, partial [Trichoplax
adhaerens]
Length = 457
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 174/375 (46%), Gaps = 57/375 (15%)
Query: 150 ELAVQRKKVEEVRAWFEE---RLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARL 206
ELA+ +KK+EEV W E +L ++K K +L++TG +G GKTAT+ +A+ + +
Sbjct: 1 ELAIHKKKIEEVVEWLRESFRQLANNK-KAPAPILLLTGPSGSGKTATIYAVANDISYEV 59
Query: 207 YEWDTPTPTIWQEYMHNCKTGLEY---TSKLDEFENFVERIRRYGSTSPSIPGESKS--- 260
EW P TI E + T ++ S++ F++F+ R +Y S + G+++S
Sbjct: 60 QEWSNPLSTIAVERRNIFSTYTDHDNIISEITSFKDFLLRANKYSKLSITTSGKTQSNKD 119
Query: 261 SAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEEL- 319
+ I+L++D P T +L + R P + ++C + + + L
Sbjct: 120 NVIILVEDYPNV-FYTDHRQLHDIIRKYCRVGRCPLVFIHSDC------QNQSYNIHTLF 172
Query: 320 -QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST-------EQIDLVAQASGGD 371
+ I+ D R + NP+ +I + L+ I +E +S I +A AS GD
Sbjct: 173 PKDIIKDCNIRTINFNPVAPTNISKLLNNIVEKESKVISIPFARFSKTDIQNIAVASVGD 232
Query: 372 IRQAITSLQF----------SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF-GRDE 420
IRQAI LQF + LK+ +N+ S + + A + ++ Q GRD+
Sbjct: 233 IRQAINCLQFLFYERKTLRNAHLKEISYVNIGGS-KRKKLKSQNASKNDAYTKQLTGRDQ 291
Query: 421 TLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDA---------PEKVLSQ 471
L LF ALGK LH KR+ + + ++ RLP + PE V+ Q
Sbjct: 292 GLYLFRALGKILHCKRDQEQDLNPNE----------RLPTHLSMHNRRRALIHPETVIEQ 341
Query: 472 AHGQARPVLDFLHEN 486
+ + + +LHEN
Sbjct: 342 SRTSSTMLRFYLHEN 356
>gi|432876354|ref|XP_004073007.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Oryzias
latipes]
Length = 630
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 145/330 (43%), Gaps = 41/330 (12%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWF---EERLGDSKDKFSTNVLVITGQAGVGKTATV 195
W ++Y P+S ELAV +KKVE+V+ W ++ S +LV+TG +G GKTATV
Sbjct: 68 WVDRYSPQSQAELAVHKKKVEDVQTWMNAHRSKVQPSGGLLQGGILVLTGPSGSGKTATV 127
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCK---TGLEYTSKLDEFENFVERIRRYGSTSP 252
R ++ LG ++ EW P+ N GL Y+S++ +F F+ R +YG S
Sbjct: 128 RVLSQELGLKVQEWTNPSNVEPYSSWQNADWRIDGLTYSSQVTQFREFLLRAYKYGCLSM 187
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
+ G + ++L++D P R L L VR P V++E D +
Sbjct: 188 AGDGGAAGKKLILVEDFPNQFSRQP-SSLHDLLRRFVRIARCPLVFVVSESVSGDGSVRS 246
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVA 365
E + + ++ ++ NP+ S+ + L I QE +++ +
Sbjct: 247 LFPREIQEELHINC----ISFNPVAPTSMMKVLGSISAQEAVKSGGRTSVPGQAELEALC 302
Query: 366 QASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ---------- 415
S GDIR AI SLQF L N +S +K + P A G G S
Sbjct: 303 SGSAGDIRSAINSLQFLCLLGSSG-NSGVSRTKKDRP---ASGRRGASRSNQKTKKTKTV 358
Query: 416 ---------FGRDETLSLFHALGKFLHNKR 436
G+D L LF ALGK LH KR
Sbjct: 359 KDQEEERAIGGKDAALFLFRALGKILHCKR 388
>gi|441658694|ref|XP_004092988.1| PREDICTED: LOW QUALITY PROTEIN: cell cycle checkpoint protein RAD17
[Nomascus leucogenys]
Length = 670
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G+ + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPVRKRGKLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKILSKEYGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEX 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLWPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|358400611|gb|EHK49937.1| hypothetical protein TRIATDRAFT_212293 [Trichoderma atroviride IMI
206040]
Length = 865
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 169/375 (45%), Gaps = 72/375 (19%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RFL PSR + + D + W+E++ PR+L+ELAV +KKV +VR W E+ +G
Sbjct: 177 RFLKPSRPTTIDTLNDD--------LRPWSERFGPRNLDELAVHKKKVADVRRWLEDVMG 228
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ VL++ G AG GKT TVR +A +G+ + EW P N TG Y
Sbjct: 229 ---ARMRQRVLILKGAAGTGKTTTVRLLAGDMGSEILEWKNPG--------GNAVTG--Y 275
Query: 231 TSKLDEFENFVERIRRYG----------STSPSIPGESKSSA----ILLIDDLPVTNGR- 275
S +FE+F+ R ++G ST S G +++S I+LI++ P T R
Sbjct: 276 VSSSAQFEDFLGRGGKFGALELEEPEPSSTPVSSNGAAQNSGGSKKIILIEEFPNTFSRN 335
Query: 276 -TAFERLRQCLLLLVRSTH---------------IPTAVVLTE---CGKADSVDSTAQSF 316
TA R+ +L + S P +V++E + S DS
Sbjct: 336 STALSSFRRTILQYLASQTPSLHAFGQQKRAEPITPVVIVISETLLTTTSASADSLTAHR 395
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--GDI 372
IL G + N I + + L + ++E + LV + G GDI
Sbjct: 396 LLGPDILRHPGVGLIEFNAIAPSLLSKALEVVVQKESRKSGRRRTPGPLVLKRLGEIGDI 455
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDETL 422
R AI+SL+F LK D + SK F ++K G ++ G R+ +L
Sbjct: 456 RSAISSLEFLCLKGDQDADWG---SKVTFTKQKKGAKDGIALTRGEEESLEQISQREASL 512
Query: 423 SLFHALGKFLHNKRE 437
+FHA+GK ++NKR+
Sbjct: 513 GIFHAVGKVVYNKRD 527
>gi|207079821|ref|NP_001129002.1| cell cycle checkpoint protein RAD17 [Pongo abelii]
gi|62287489|sp|Q5R652.1|RAD17_PONAB RecName: Full=Cell cycle checkpoint protein RAD17
gi|55732116|emb|CAH92764.1| hypothetical protein [Pongo abelii]
Length = 681
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 188/426 (44%), Gaps = 51/426 (11%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 50 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKILSKEHGIQVQEWINP 164
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 224
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 225 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 279
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 280 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 339
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 340 LQFSSSKGENNLWPRKKGMSLKSDAVLSKSKQRKKPDRVFENQEVQAIG------GKDVS 393
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 394 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 450
Query: 481 DFLHEN 486
+LH+N
Sbjct: 451 LYLHQN 456
>gi|4102916|gb|AAD01620.1| cell cycle checkpoint protein RAD17 [Homo sapiens]
Length = 670
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQISVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|358379792|gb|EHK17471.1| hypothetical protein TRIVIDRAFT_42692 [Trichoderma virens Gv29-8]
Length = 861
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 175/380 (46%), Gaps = 81/380 (21%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RFL PSR + + D + W+E++ PR+L+ELAV +KKV +VR W E+ +G
Sbjct: 178 RFLKPSRPASIDTLNDD--------LRPWSERFGPRNLDELAVHKKKVSDVRKWLEDVMG 229
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +L++ G AG GKT TVR +A+ +G+ + EW+ P N TG +
Sbjct: 230 ---GRMRQRLLILKGAAGTGKTTTVRLLANDMGSEILEWNNPA--------GNSTTG--F 276
Query: 231 TSKLDEFENFVERIRRYG---------------STSPSIPGESKSSAILLIDDLPVTNGR 275
S +FE+F+ R ++G S + S P + + I+LI++ P T R
Sbjct: 277 VSASAQFEDFLGRGGKFGALDLEEPEPSPTPASSNNASQPPNNNAKKIILIEEFPNTFSR 336
Query: 276 --TAFERLRQCLLLLV--------------RSTHI-PTAVVLTECGKADSVDSTAQSFEE 318
TA R+ +L + R+ I P +V++E + +T+ S +
Sbjct: 337 SSTALSSFRRTILQYLATQTPSLHTFGQQKRTEPITPVVIVISET----LLTTTSASADS 392
Query: 319 LQS-------ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG 369
L + IL G + N I + + L + ++E + LV + G
Sbjct: 393 LTAHRLLGPEILRHPGVGLIEFNAIAPSLLAKALELVVQKESRKSGRRRTPGPLVLKRLG 452
Query: 370 --GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG---------- 417
GDIR A++SL+F LK D + SK F ++K G ++ G
Sbjct: 453 EIGDIRSAVSSLEFLCLKGDQDADWG---SKVTFTKQKKGAKDGIALTRGEEESLEQISQ 509
Query: 418 RDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+GK ++NKR+
Sbjct: 510 REASLGIFHAVGKVVYNKRD 529
>gi|5059034|gb|AAD38878.1|AF112263_1 hRad17 protein [Homo sapiens]
gi|21619030|gb|AAH32304.1| RAD17 homolog (S. pombe) [Homo sapiens]
gi|123981410|gb|ABM82534.1| RAD17 homolog (S. pombe) [synthetic construct]
gi|123996251|gb|ABM85727.1| RAD17 homolog (S. pombe) [synthetic construct]
Length = 670
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|119571666|gb|EAW51281.1| RAD17 homolog (S. pombe), isoform CRA_c [Homo sapiens]
Length = 655
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|353235378|emb|CCA67392.1| related to cell cycle checkpoint protein RAD17 [Piriformospora
indica DSM 11827]
Length = 618
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 179/412 (43%), Gaps = 61/412 (14%)
Query: 108 NVGRFLTPSRFEGLVNPDHDSASASSSTQQ------LWAEKYKPRSLEELAVQRKKVEEV 161
N G+FL P L P + SSS Q LWA+ Y P + +ELAV +KKV+ V
Sbjct: 44 NTGKFLIP-----LPPPPRSNHPTSSSRQDNTVEDSLWADTYHPSTEQELAVHKKKVDIV 98
Query: 162 RAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYM 221
R WF + K +LV++G AG GKTAT+ ++ + + E WQ +
Sbjct: 99 RKWFRDAFEGINLKRYRKILVLSGPAGCGKTATLNVLSKEMKFTVVE--------WQNKV 150
Query: 222 HNCKTGLEYTSKLDEFENFVERIRRYGS--TSPSIPGESKSSAILLIDDLPVTNGRTAFE 279
+ +Y S +F +F+ R + + P IPG + I+L++DLP + +
Sbjct: 151 DDAHID-DYESFPAKFGSFMSRAADFSPLMSEPQIPGS--QNHIILLEDLPNLSYAPTLQ 207
Query: 280 RLRQCLLLLVRSTHIPTAVVLTECG-----KADSVDSTAQSFEELQSILVDAGAR----- 329
L+ + ++ IP ++++ G K + S+ QS ++ R
Sbjct: 208 AFHAALINHIETSDIPVVIIVSNAGIRGQTKDEEGWSSRQSTVPTAFNILPPALRGGPFV 267
Query: 330 -KVALNPITNGSIKRTL-----SKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
+V NPI +K L S + S + +D V S GDIR A+ SLQF +
Sbjct: 268 TQVEFNPIAATLMKTGLKWVLDSHFANNPKLKPSKDVVDAVVDTSRGDIRSALMSLQFMT 327
Query: 384 LKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETD---- 439
++ +F I+ R+ +L+LFH LGK L+NKR D
Sbjct: 328 MQG-------------SFKGNSRYSKNSLVIETNREHSLALFHLLGKILYNKRVGDPIST 374
Query: 440 NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPV-LDFLHENCWLD 490
L K DQ +K P+ + A LSQ +A V +D L+ + +D
Sbjct: 375 TLSKKDQALEQEYEKLLPSPIPLPA---HLSQFDRRASKVDVDVLYTDSAID 423
>gi|426384483|ref|XP_004058793.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 1 [Gorilla
gorilla gorilla]
gi|426384485|ref|XP_004058794.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 2 [Gorilla
gorilla gorilla]
gi|426384487|ref|XP_004058795.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 3 [Gorilla
gorilla gorilla]
gi|426384489|ref|XP_004058796.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 4 [Gorilla
gorilla gorilla]
Length = 670
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|355691367|gb|EHH26552.1| Cell cycle checkpoint protein RAD17 [Macaca mulatta]
Length = 602
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 198/452 (43%), Gaps = 59/452 (13%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S S + W +KYKP + ELA
Sbjct: 79 KNGPSTLESSKFPARKRGNLSSLEQIYGLEN-----SKESLSENEPWVDKYKPETQHELA 133
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 134 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKVLSKEHGIQVQEWINP 193
Query: 213 TPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q+ + N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 194 VLPDFQKDDFREIFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 253
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P V+++ D+ Q + I +
Sbjct: 254 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFVISDSLSGDN----NQRLLFPKEIQEE 308
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYS-------LSTEQIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E L ++L+ Q GDIR AI S
Sbjct: 309 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVLDKTSLELLCQGCSGDIRSAINS 368
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 369 LQFSSSKGENNLWPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 422
Query: 422 LSLFHALGKFLHNKR-ETDNLVKMDQDAFVVKDKFSRLPLK-MDAPEKVLSQAHGQA--- 476
L LF ALGK L+ K+ E D L+ + ++++ + + + + K AH Q
Sbjct: 423 LFLFRALGKILYCKKYERDTLLVEPETCSLLREYSTSIATRGVIHSNKARGYAHCQGGGS 482
Query: 477 --RPVLDFLHENCWLDIMRQTMFY-NLLRLQL 505
RP LH+ W I ++ F ++ RL L
Sbjct: 483 SFRP----LHKPQWFLIYKKISFIQDIGRLPL 510
>gi|60654471|gb|AAX29926.1| RAD17 [synthetic construct]
Length = 671
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|4506383|ref|NP_002864.1| cell cycle checkpoint protein RAD17 isoform 1 [Homo sapiens]
gi|19718784|ref|NP_579916.1| cell cycle checkpoint protein RAD17 isoform 1 [Homo sapiens]
gi|19718792|ref|NP_579920.1| cell cycle checkpoint protein RAD17 isoform 1 [Homo sapiens]
gi|19718794|ref|NP_579921.1| cell cycle checkpoint protein RAD17 isoform 1 [Homo sapiens]
gi|19718796|ref|NP_579922.1| cell cycle checkpoint protein RAD17 isoform 1 [Homo sapiens]
gi|3410696|emb|CAA06251.1| cell cycle checkpoint protein [Homo sapiens]
gi|3929746|emb|CAA04894.1| cell cycle checkpoint protein [Homo sapiens]
gi|4019205|gb|AAC95520.1| Rad17-like protein [Homo sapiens]
gi|4325327|gb|AAD17334.1| cell cycle checkpoint protein [Homo sapiens]
gi|5420607|emb|CAB46364.1| HRAD17 protein [Homo sapiens]
gi|6102863|emb|CAB59244.1| hypothetical protein [Homo sapiens]
gi|47060295|gb|AAT09763.1| RAD17 homolog (S. pombe) [Homo sapiens]
gi|117644914|emb|CAL37923.1| hypothetical protein [synthetic construct]
gi|119571668|gb|EAW51283.1| RAD17 homolog (S. pombe), isoform CRA_e [Homo sapiens]
gi|119571669|gb|EAW51284.1| RAD17 homolog (S. pombe), isoform CRA_e [Homo sapiens]
gi|119571670|gb|EAW51285.1| RAD17 homolog (S. pombe), isoform CRA_e [Homo sapiens]
gi|119571671|gb|EAW51286.1| RAD17 homolog (S. pombe), isoform CRA_e [Homo sapiens]
gi|119571673|gb|EAW51288.1| RAD17 homolog (S. pombe), isoform CRA_e [Homo sapiens]
gi|158258411|dbj|BAF85176.1| unnamed protein product [Homo sapiens]
gi|168270902|dbj|BAG10244.1| cell cycle checkpoint protein RAD17 [synthetic construct]
Length = 670
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|60835624|gb|AAX37147.1| RAD17-like [synthetic construct]
Length = 671
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|426384491|ref|XP_004058797.1| PREDICTED: cell cycle checkpoint protein RAD17 isoform 5 [Gorilla
gorilla gorilla]
Length = 681
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 50 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 164
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 224
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 225 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 279
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 280 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 339
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 340 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 393
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 394 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 450
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 451 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 510
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 511 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 540
>gi|19718786|ref|NP_579917.1| cell cycle checkpoint protein RAD17 isoform 2 [Homo sapiens]
gi|62287484|sp|O75943.2|RAD17_HUMAN RecName: Full=Cell cycle checkpoint protein RAD17; Short=hRad17;
AltName: Full=RF-C/activator 1 homolog
gi|119571665|gb|EAW51280.1| RAD17 homolog (S. pombe), isoform CRA_b [Homo sapiens]
Length = 681
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 50 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 164
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 224
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 225 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 279
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 280 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 339
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 340 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 393
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 394 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 450
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 451 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 510
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 511 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 540
>gi|31873384|emb|CAD97683.1| hypothetical protein [Homo sapiens]
Length = 670
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSRFPARKRGNLSSLEQVYGLEN-----SKEYLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 440 LYLHQNYIDFFMEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 529
>gi|149726555|ref|XP_001504750.1| PREDICTED: cell cycle checkpoint protein RAD17 [Equus caballus]
Length = 682
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 187/436 (42%), Gaps = 71/436 (16%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G+ + R GL N + + W +KYKP + ELA
Sbjct: 50 KNVPSTLESSKFPARKRGKLSSSERIYGLEN-----SKEYLPENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + + + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKAEVLERQPKQGGSILLITGPPGCGKTTTIKILSKEHGIQVQEWINP 164
Query: 213 TPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q+ + N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 165 ILPDFQKDDFREIFNPESSFHVFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 224
Query: 266 IDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
++DLP + RT E LR+ V+ P ++++ DS Q + I
Sbjct: 225 VEDLPNQFYRDSRTLHEVLRK----YVQMGRCPLVFIVSDSLSGDS----NQRLLFPKEI 276
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI-------DLVAQASGGDIRQA 375
+ ++ NP+ + + L++I +E I +++ Q GDIR A
Sbjct: 277 QEECAISSISFNPVAPTIMMKFLNRIVTRETNKNGGNVIVPDKAFLEVLCQGCSGDIRSA 336
Query: 376 ITSLQFS---------------SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDE 420
I SLQFS SLK D L+ S +P+ E + G+D
Sbjct: 337 INSLQFSSKGENSLWQRKKGMFSLKSDAALSKSKQRKRPDQVSESQEAQA----VGGKDV 392
Query: 421 TLSLFHALGKFLHNKR----ETD------NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLS 470
+L LF ALGK L+ KR E D +L + ++DA +V+ PE+V+
Sbjct: 393 SLFLFRALGKILYCKRASLTELDSPPLPRHLSEHERDALLVQ------------PEEVVE 440
Query: 471 QAHGQARPVLDFLHEN 486
+H +LH+N
Sbjct: 441 MSHMPGELFNLYLHQN 456
>gi|50540390|ref|NP_001002661.1| cell cycle checkpoint protein RAD17 [Danio rerio]
gi|49901334|gb|AAH76494.1| RAD17 homolog (S. pombe) [Danio rerio]
gi|182890084|gb|AAI63976.1| Rad17 protein [Danio rerio]
Length = 665
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 195/466 (41%), Gaps = 90/466 (19%)
Query: 73 VNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLV-------NPD 125
V P LG SR + K P S E +K++ R + P + + NPD
Sbjct: 19 VEPSFGELLGGVSR----SLKKGPLSGESKTAEKKSRKRKVDPYVSDNQITVSSEANNPD 74
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITG 185
D + W + + P+S ELAV +KKVEEV +W L SK + +L++TG
Sbjct: 75 QD---------EPWVDIHAPQSQAELAVHKKKVEEVESWLRVHLDKSKKGGA--ILLLTG 123
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTI-----------------WQEYMHNCKTGL 228
+G GKTATV+ +A LG ++ EW P+ T + + + +TGL
Sbjct: 124 PSGCGKTATVQVLAKELGFQVQEWSNPSTTSQYKTEDLFTQSFDPDSRFNRFHGSSQTGL 183
Query: 229 EYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLL 288
F+ F+ R +Y S ++ I+LI++ P F R CL +
Sbjct: 184 --------FQEFLLRANKYSRLRMSGETWTEDRKIILIEEFP-----NQFYRQPGCLHDI 230
Query: 289 VRSTHIPTAVVLTECGK-------ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSI 341
+R +CG+ +DS+ S + +L + G ++ NP+ S+
Sbjct: 231 LRQ--------FIKCGRCPLVLIVSDSLSGDKNSRLLFKDVLQELGIHNISFNPVAPTSM 282
Query: 342 KRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITSLQFSSLKQDP----ML 390
+ LS+I E S +DL+ S GDIR AI SLQFSS + +
Sbjct: 283 MKVLSRIVTIEAVKSSGRISVPDKAALDLLCSGSSGDIRSAINSLQFSSFTDNSLERRLW 342
Query: 391 NLSLSISKPNFPEEKADGHGGFSIQF----------GRDETLSLFHALGKFLHNKRETDN 440
S P KA G S G+D +L LF ALGK L+ KRE+
Sbjct: 343 ASKKGKSSSAKPAVKAKGRSKSSKSKDMQDESPAIGGKDASLFLFRALGKILYCKRESYE 402
Query: 441 LVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ + + D R L +D PE V+ ++H +LH+N
Sbjct: 403 GTQAPKLPPHLTDH-QRDRLLVD-PELVIERSHMSGEFFNLYLHQN 446
>gi|62287510|sp|Q9XT62.1|RAD17_CERAE RecName: Full=Cell cycle checkpoint protein RAD17
gi|5353550|gb|AAD42177.1|AF106067_1 Rad17 [Chlorocebus aethiops]
Length = 670
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 212/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + L N + S S + W +KYKP + ELA
Sbjct: 39 KNGPSTLESSKFPVRKRGNLSSLEQIYSLEN-----SKESLSENEPWVDKYKPETQHELA 93
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKVLSKEHGIQVQEWINP 153
Query: 213 TPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q+ + N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 154 VLPDFQKDDFREIFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 213
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P V+++ D+ Q + I +
Sbjct: 214 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFVISDSLSGDN----NQRLLFPKEIQEE 268
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 269 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 328
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 329 LQFSSSKGENNLWPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 382
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 383 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFN 439
Query: 481 DFLHENC------WLDIMRQTMFYNLLRLQ-------LLLVEYYLEI------------- 514
+LH+N DI+R + F + + LL EY I
Sbjct: 440 LYLHQNYIDFFMDIDDIVRASEFLSFADILSGDWNTCSLLREYSTSIATRGVIHSNKARG 499
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 500 YAHCQGGGSSFRPLHKPQWFLIYKKYRENC 529
>gi|148227978|ref|NP_001082566.1| RAD17 homolog [Xenopus laevis]
gi|47937773|gb|AAH72343.1| Rad17 protein [Xenopus laevis]
Length = 674
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 179/398 (44%), Gaps = 50/398 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D++ + S W +KY+P ELAV +KK+EEV AW + + K +L++T
Sbjct: 72 DNNQHTFDYSQNDPWIDKYRPEIQAELAVHKKKIEEVEAWLKTHVEKRPQKQGGQILLLT 131
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE-------- 236
G G GKTAT++ + +G ++ EW P + QE+ + + ++
Sbjct: 132 GPPGCGKTATIQVLTKEMGIQVQEWINP---LMQEFKQDLPEVFDRDTRFQPFTSQSQTS 188
Query: 237 -FENFVERIRRYGSTSPSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTH 293
F +F+ R +Y + GES S+ I+++DD+P R L L V++
Sbjct: 189 LFHDFLLRANKYNKL--QMVGESLSTDRKIIVVDDMPNQFYRDP-SALHDILRRFVKTGR 245
Query: 294 IPTAVVLTECGKADSVDSTAQSF-EELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
P ++++ +S + F +E+Q LV ++ NP+ ++ + L++I E
Sbjct: 246 CPLVFIISDSLSGES--HQRRLFPKEIQEELV---VNNISFNPVAPTTMTKVLTRIASTE 300
Query: 353 QYSLSTEQI-------DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK------- 398
+ + I +L+ S GDIR AI SLQFS+ + + N S S S+
Sbjct: 301 ANASGGKIIIPDKASLELICTGSSGDIRSAINSLQFSARQGSSLKNDSWSKSRGKASKSG 360
Query: 399 ------PNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFV 450
E + G +Q G+D +L LF ALGK L+ KR+ V D D +
Sbjct: 361 KPSSKSKTKKEPRKGGENVDEVQAIGGKDASLFLFRALGKILYCKRDP---VPDDTDVYR 417
Query: 451 VKDKFSRL--PLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ S L + PE V+ ++H +LH+N
Sbjct: 418 LPAHLSEYNRDLLLILPEAVVEKSHMNGELFNLYLHQN 455
>gi|30060003|gb|AAP13338.1| RFC-like DNA checkpoint protein Rad17 [Xenopus laevis]
Length = 674
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 179/398 (44%), Gaps = 50/398 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D++ + S W +KY+P ELAV +KK+EEV AW + + K +L++T
Sbjct: 72 DNNQHTFDYSQNDPWIDKYRPEIQAELAVHKKKIEEVEAWLKTHVEKRPQKQGGQILLLT 131
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE-------- 236
G G GKTAT++ + +G ++ EW P + QE+ + + ++
Sbjct: 132 GPPGCGKTATIQVLTKEMGIQVQEWINP---LMQEFKQDLPEVFDRDTRFQPFTSQSQTS 188
Query: 237 -FENFVERIRRYGSTSPSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTH 293
F +F+ R +Y + GES S+ I+++DD+P R L L V++
Sbjct: 189 LFHDFLLRANKYNKL--QMVGESLSTDRKIIVVDDMPNQFYRDP-SALHDILRRFVKTGR 245
Query: 294 IPTAVVLTECGKADSVDSTAQSF-EELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
P ++++ +S + F +E+Q LV ++ NP+ ++ + L++I E
Sbjct: 246 CPLVFIISDSLSGES--HQRRLFPKEIQEELV---VNNISFNPVAPTTMTKVLTRIASTE 300
Query: 353 QYSLSTEQI-------DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK------- 398
+ + I +L+ S GDIR AI SLQFS+ + + N S S S+
Sbjct: 301 ANASGGKIIIPDKASLELICTGSSGDIRSAINSLQFSARQGSSLKNDSWSKSRGKASKSG 360
Query: 399 ------PNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFV 450
E + G +Q G+D +L LF ALGK L+ KR+ V D D +
Sbjct: 361 KPSSKSKTKKEPRKGGENVEEVQAIGGKDASLFLFRALGKILYCKRDP---VPDDTDVYR 417
Query: 451 VKDKFSRL--PLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ S L + PE V+ ++H +LH+N
Sbjct: 418 LPAHLSEYNRDLLLILPEAVVEKSHMNGDLFNLYLHQN 455
>gi|3641289|gb|AAC36334.1| RF-C/activator 1 homolog [Homo sapiens]
Length = 681
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 213/510 (41%), Gaps = 77/510 (15%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G + + GL N + S + W +KYKP + ELA
Sbjct: 50 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 164
Query: 213 TPTIWQ----EYMHNCKTG---LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ L Y S++ F+ F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKGMFNTESSFHMLPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 224
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L VR P ++++ D+ Q + I +
Sbjct: 225 VEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 279
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 280 CSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 339
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
QFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 340 PQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 393
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVL 480
L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 394 LFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMSGDLFN 450
Query: 481 DFLHENC------WLDIMRQTMFYNLLRL-------QLLLVEYYLEI------------- 514
+LH+N DI+R + F + + + LL EY I
Sbjct: 451 LYLHQNYIDFFTEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARG 510
Query: 515 LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
C GG F +W + K R +C
Sbjct: 511 YAHCQGGGSSFRPLHKPQWFLINKKYRENC 540
>gi|301610654|ref|XP_002934861.1| PREDICTED: cell cycle checkpoint protein RAD17 [Xenopus (Silurana)
tropicalis]
Length = 675
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 186/408 (45%), Gaps = 69/408 (16%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D + + S + W +KY+P ELAV +KK+EEV AW + + K ++L++T
Sbjct: 72 DKNQQTFDYSQNEPWIDKYRPDVQAELAVHKKKIEEVEAWLKTHVEKRTQKQGGHILLLT 131
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEY-------MHNCKTGLE-YTSKLDE 236
G G GKTAT++ + +G ++ EW P + QEY + + G + +TS+
Sbjct: 132 GPPGCGKTATIQVLTKEMGIQVQEWINP---LMQEYRQEDRPEVFDRDMGFQPFTSQSQT 188
Query: 237 --FENFVERIRRYGSTSPSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRST 292
F +F+ R +Y + GES S+ I+++DD+P R L L V++
Sbjct: 189 SLFHDFLLRANKYNKL--QMVGESLSTDRKIIVVDDMPNQFYRDP-SSLHDILRRFVKTG 245
Query: 293 HIPTAVVLTECGKADSVDSTAQSF-EELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
P ++++ +S + F +E+Q LV ++ NP+ ++ + L++I
Sbjct: 246 RCPLVFIISDSLSGES--HQRRLFPKEIQEELV---VNNISFNPVAPTTMTKVLTRIAST 300
Query: 352 EQYSLSTEQI--------DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK----- 398
E ++S +I DL+ S GDIR AI SLQFS+ K + N + S S+
Sbjct: 301 EA-NMSGGKIIIPDKASLDLICTGSSGDIRSAINSLQFSAQKGSFLTNNTCSKSRGKATK 359
Query: 399 ------------------PNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDN 440
N E +A G G+D +L LF ALGK L+ KRE
Sbjct: 360 SGKTSSKSKSKKGSQKGGENIDEVQAIG--------GKDASLFLFRALGKILYCKREP-- 409
Query: 441 LVKMDQDAFVVKDKFSRL--PLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ D D + + S L + PE V+ ++H +LH+N
Sbjct: 410 -LPEDTDIYRLPAHLSEYNRDLLLVLPEAVVEKSHMNGDLFNLYLHQN 456
>gi|47087169|ref|NP_998749.1| cell cycle checkpoint protein RAD17 [Gallus gallus]
gi|46395284|dbj|BAD16574.1| Rad17 [Gallus gallus]
Length = 694
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 71/395 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + +LAVQ+KK+EEV W + + + K VL++TG AG GKTATV+ +
Sbjct: 98 WVDKYKPETQNDLAVQKKKIEEVETWLKMHIFQRQPKQDGCVLLLTGPAGCGKTATVQIL 157
Query: 199 ASHLGARLYEWDTPTPTIWQE------YMHNCKT-GLEYTSKLDEFENFVERIRRYGSTS 251
A LG ++ EW P + + HN + ++ F++F+ R +Y
Sbjct: 158 AKDLGVQVQEWTNPISLDFTKEDLRNISGHNSNSHTFPSQAQAALFQDFLLRANKYNKL- 216
Query: 252 PSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
+ GES + ++LI+D+P R L + L VR++ P ++++ DS
Sbjct: 217 -QMLGESSENDKKLILIEDMPNQFYRDP-SSLHEILRRFVRTSRCPLIFIISDNFSGDSN 274
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC-------RQEQYSLSTEQID 362
E L+ + + ++ P+ ++ + L++I R++ Y+ ++
Sbjct: 275 QRLLFPKEILEELCISI----ISFKPVAPTNMMKVLNRIATAEANMNREKNYAPDRASLE 330
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ----------------------DPMLNLSLSISKPN 400
L+ + GDIR AI SLQF S+K M +L SK +
Sbjct: 331 LLCKGCSGDIRSAINSLQFFSMKDCSLEKDFWSRKKRSSTLKSETAAAMCSLRKK-SKSD 389
Query: 401 FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPL 460
E++A G G+D ++ LFHALGK ++ KRE + + +F +LP
Sbjct: 390 ISEDQAIQAIG-----GKDASIFLFHALGKIIYCKREP-----------LSESEFPQLPS 433
Query: 461 K---------MDAPEKVLSQAHGQARPVLDFLHEN 486
+ PE ++ ++H +LH+N
Sbjct: 434 HLLEHHRDTLLIHPEDIVEKSHMSGSMFNLYLHQN 468
>gi|417403895|gb|JAA48729.1| Putative checkpoint rad17-rfc complex rad17/rad24 component
[Desmodus rotundus]
Length = 684
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 196/460 (42%), Gaps = 76/460 (16%)
Query: 79 LALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQL 138
L++ +SSR++ KN P ++E G + + L N + S +
Sbjct: 40 LSVNNSSRRR----KNVPSTVESSTFPTRKRGTLSSSQQIYALEN-----SKKYLSENEP 90
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + ELAV +KK+EEV W + + + + K ++L+ITG G GKT T++ +
Sbjct: 91 WVDKYKPETQHELAVHKKKIEEVETWLKAEVLERQTKQGGSILLITGPPGCGKTTTIKIL 150
Query: 199 ASHLGARLYEWDTPTPTIWQ-----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGST 250
+ G ++ EW P +Q E M N ++ Y S++ F+ F+ R +Y
Sbjct: 151 SKEHGIQVQEWINPALPQFQKDDFKEIMFNYESSFHVFPYQSQIAVFKEFLLRATKYNKL 210
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
I+L++DLP R + L + L V+ P ++++ D+
Sbjct: 211 QMVGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRTYVQIGRCPLIFIISDSLSGDN-- 267
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-------LSTEQIDL 363
Q + I + ++ NP+ + + L++I E ++L
Sbjct: 268 --NQRLLFPKEIQEECAISNISFNPVAPTIMMKFLNRIVTIEANKNGGNITVPDKTSLEL 325
Query: 364 VAQASGGDIRQAITSLQF----------------SSLKQDPMLNLSLSISKPN--FPEEK 405
+ Q GDIR AI SLQF SSLK D L+ S KP+ F ++
Sbjct: 326 LCQGCSGDIRSAINSLQFSSSKGRSNLCPRKKGMSSLKSDAALSKSRRRKKPDKVFENQE 385
Query: 406 ADGHGGFSIQFGRDETLSLFHALGKFLHNKRET----------DNLVKMDQDAFVVKDKF 455
G G+D +L LF ALGK L+ KR + +L + ++D +V
Sbjct: 386 VQAIG------GKDVSLFLFRALGKILYCKRASLTELESPRLPSHLSEHERDTLLVH--- 436
Query: 456 SRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQT 495
PE+V+ +H +LH+N ++D ++
Sbjct: 437 ---------PEEVVEMSHMPEELFNLYLHQN-YVDFFKEV 466
>gi|53133382|emb|CAG32020.1| hypothetical protein RCJMB04_16b18 [Gallus gallus]
Length = 693
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 71/395 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + +LAVQ+KK+EEV W + + + K VL++TG AG GKTATV+ +
Sbjct: 97 WVDKYKPETQNDLAVQKKKIEEVETWLKMHIFQRQPKQDGCVLLLTGPAGCGKTATVQIL 156
Query: 199 ASHLGARLYEWDTPTPTIWQE------YMHNCKT-GLEYTSKLDEFENFVERIRRYGSTS 251
A LG ++ EW P + + HN + ++ F++F+ R +Y
Sbjct: 157 AKDLGVQVQEWTNPISLDFTKEDLRNISGHNSNSHTFPSQAQAALFQDFLLRANKYNKL- 215
Query: 252 PSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
+ GES + ++LI+D+P R L + L VR++ P ++++ DS
Sbjct: 216 -QMLGESSENDKKLILIEDMPNQFYRDP-SSLHEILRRFVRTSRCPLIFIISDNFSGDSN 273
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC-------RQEQYSLSTEQID 362
E L+ + + ++ P+ ++ + L++I R++ Y+ ++
Sbjct: 274 QRLLFPKEILEELCISI----ISFKPVAPTNMMKVLNRIATAEANMNREKNYAPDRASLE 329
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ----------------------DPMLNLSLSISKPN 400
L+ + GDIR AI SLQF S+K M +L SK +
Sbjct: 330 LLCKGCSGDIRSAINSLQFFSMKDCSLEKDFWSRKKRSSTLKSETAAAMCSLRKK-SKSD 388
Query: 401 FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPL 460
E++A G G+D ++ LFHALGK ++ KRE + + +F +LP
Sbjct: 389 ISEDQAIEAIG-----GKDASIFLFHALGKIIYCKREP-----------LSESEFPQLPS 432
Query: 461 K---------MDAPEKVLSQAHGQARPVLDFLHEN 486
+ PE ++ ++H +LH+N
Sbjct: 433 HLLEHHRDTLLIHPEDIVEKSHMSGSMFNLYLHQN 467
>gi|149408523|ref|XP_001512393.1| PREDICTED: cell cycle checkpoint protein RAD17 [Ornithorhynchus
anatinus]
Length = 679
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 200/444 (45%), Gaps = 52/444 (11%)
Query: 80 ALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNP---DHDSASASSSTQ 136
+LG + QQ K+ P +LE ++ P+R G + D +++ S S
Sbjct: 39 SLGVNGTQQ--RKKDLPSTLES--------SKYRFPARKRGKSSEQVCDQSNSNRSLSEN 88
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
+ W +KY+P + ELAV +KK+EEV W + ++ + K ++L++TG G GKTAT++
Sbjct: 89 ETWVDKYRPETQSELAVHKKKIEEVETWLKAQILKGQPKQGGSILLLTGPPGCGKTATLQ 148
Query: 197 QIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLEY---TSKLDEFENFVERIRRYGS 249
+ LG ++ EW P ++ + M N ++ + S++ F+ F+ R +Y
Sbjct: 149 ILTKDLGIQVQEWINPVFLDFRKDDFKDMFNPESSFQAFPTRSQMTVFQEFILRANKYNK 208
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
++L++D+P R L + L V+ P ++++ DS
Sbjct: 209 LQMVGDSLDTDKKLILVEDMPNQFYRDP-SGLHEILRRFVQIGRCPLVFIISDSLSGDS- 266
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE------QYSLSTEQIDL 363
+Q + I + ++ NP+ + + L++I E + ++L
Sbjct: 267 ---SQKLLFPKEIQEELSVSNISFNPVAPTIMMKVLNRIATAEGSLKGGKVVPDKTSLEL 323
Query: 364 VAQASGGDIRQAITSLQFSSLKQD----------PMLNLSLSISKPNFPEEKADGHGGFS 413
+ + GDIR AI SLQFSS K + P L + S+ +++ G
Sbjct: 324 ICKGCSGDIRSAINSLQFSSSKVESNPWSRKKGLPSLKSDTASSR---AKQRKKAEGSLE 380
Query: 414 IQ-----FGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKV 468
Q G+D +L LF ALGK L+ KRE K + + + + R PL M PE+V
Sbjct: 381 NQEVQAIGGKDASLFLFRALGKILYCKREPLKEFKYPRLPSHLTE-YERDPLVMQ-PEEV 438
Query: 469 LSQAHGQARPVLDFLHENCWLDIM 492
+ ++H +LH+N +LD
Sbjct: 439 VEKSHMAGELFNLYLHQN-YLDFF 461
>gi|443732689|gb|ELU17316.1| hypothetical protein CAPTEDRAFT_93455 [Capitella teleta]
Length = 603
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 177/377 (46%), Gaps = 48/377 (12%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
++ +LW +KY P + +LAV +KKVEE+ A+ R+ S + + V+++TG G GK+A
Sbjct: 68 NSDELWCDKYAPCTQADLAVHKKKVEEL-AFHLNRIS-SGEPHTPPVVLLTGPCGAGKSA 125
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLEYTSK--LDEFENFVERIRRY 247
V+ IA L + EW P Q +Y TSK + F F+ R +Y
Sbjct: 126 AVKVIAKELNMDIQEWINPLQDDDQFNREDYQKEYSLFGSVTSKSQIQNFREFLLRANKY 185
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRT--AFERLRQCLLLLVRSTHIPTAVVLTECGK 305
S G + S ++L++D P R AF+ L + R P V+++
Sbjct: 186 ASL-----GAATSKRLILVEDFPNVFLRDSGAFKEL---VRHYCRQGRCPLVFVVSDSQS 237
Query: 306 ADSVDST--AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE-QYSLSTEQID 362
++S++ + + F+ + V VA NP+T +I +TL KI +E S S +++
Sbjct: 238 SESIERSLFPKDFQAELHMTV------VAFNPVTTANIVKTLQKILAKEPNVSCSKDELT 291
Query: 363 LVAQASGGDIRQAITSLQFS----------SLKQDPMLNLS---LSISKPNFPEEKADGH 409
+A+ + GD+R A+ LQF S+K+ P L + L SK + ++A
Sbjct: 292 ALAERNSGDVRSAVNGLQFMGWKTKPTSVFSVKKKPALKSARTKLKSSKTSASTKEAKAE 351
Query: 410 GGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVL 469
G +D +L LF ALGK LH KRE + + R P ++ PE+VL
Sbjct: 352 IG-----DKDSSLFLFRALGKVLHCKREETPPTTSTLPPHLC--HYQR-PELLEMPEEVL 403
Query: 470 SQAHGQARPVLDFLHEN 486
++H F+H+N
Sbjct: 404 HRSHMSGELFTAFIHQN 420
>gi|390354504|ref|XP_787106.3| PREDICTED: cell cycle checkpoint protein RAD17-like
[Strongylocentrotus purpuratus]
Length = 663
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 187/404 (46%), Gaps = 64/404 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWF----EERLGDSKDKFSTNVLVITGQAGVGKT 192
Q WAE++ P+S+ +LAV +KK++EV+ W ++R K +L++TG AG GKT
Sbjct: 65 QTWAERHAPQSVADLAVHKKKIQEVQEWLTFHTKQRGQQPKPHTKAPLLLLTGPAGAGKT 124
Query: 193 ATVRQIASHLGARLYEWDTPTPTIW---QEYMHNCKTGLEYTSKLDEFENFVERIRRYGS 249
AT+ +A LG + EW P + Q+ + ++ S++ +F++F++R RY +
Sbjct: 125 ATLSVLAKELGLEVQEWSNPITEAFKMDQDTDYRSDFYVKNESQVKQFQDFLKRANRYPA 184
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCL-LLLVRSTHI---PTAVVLTEC-- 303
S E +++ ++L++++P AF R L +L R +H P ++++
Sbjct: 185 LSLVGAQEERTNKVVLVEEIP-----NAFYRDPSSLHAVLTRFSHTGRSPLVFIVSDSHG 239
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC-------RQEQYSL 356
GK++ + ++ SI ++ NP+ S+ +T++KI R + Y
Sbjct: 240 GKSNVLSLFPSDVQDNLSI------HNISFNPVAPTSMTKTMTKIATAEAAKARHKFYVP 293
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLN---------------------LSLS 395
S I+ +A +S GDIR AI +LQF+ LK L S S
Sbjct: 294 SKSTIEALAASSSGDIRGAINALQFACLKGTDSLQRSSQKSSSLPSSWSSTPSSSSSSSS 353
Query: 396 ISKPNFPEEKADGHGG--------FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQD 447
I + + + G + GRD +L LF ALGK L+ KRE
Sbjct: 354 IGSSQWKDRRKQARGSKDDKEDKRLAAIGGRDTSLFLFRALGKVLYCKREPKTASDPVLP 413
Query: 448 AFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDI 491
+ + RL + PE+++ + H + +LH+N +LD
Sbjct: 414 PHLHHHERDRLIIN---PEELIERTHMSSENFTLYLHQN-YLDF 453
>gi|430814525|emb|CCJ28253.1| unnamed protein product [Pneumocystis jirovecii]
Length = 574
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 182/385 (47%), Gaps = 62/385 (16%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW+EKY P ++++LAV +KK+ EVR + L + K ++++TG AG GKT+T+
Sbjct: 104 LWSEKYSPLTVDDLAVSKKKISEVRYCLQRVLKHNSQK---KLIILTGPAGSGKTSTINV 160
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS-PSIPG 256
++ +G + EW P M +Y S +FENF+ ++Y S
Sbjct: 161 LSKEMGFEILEWQNP--------MSLLPENTDYQSLFSKFENFLLISKQYSSLDFDQTIK 212
Query: 257 ESKSSAILLIDDLPVTNGRTAF-----ERLRQCLLLLVRST---HIPTAVVLTECGKADS 308
S S I+LI+DLP N T+F E Q L+L ++ P +++TE
Sbjct: 213 NSSESKIILIEDLP--NIYTSFYDISKENDFQSLILRYITSSRNKYPLVLIVTEVD---- 266
Query: 309 VDSTAQSFEEL---QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST--EQIDL 363
+ F+E+ ++I+ ++ NPIT S+++ +++I E +S E ++
Sbjct: 267 ----FKGFDEMDTKETIIESEKTVQINFNPITKLSLQKIINRIVNIEYHSQKPDLELVES 322
Query: 364 VAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNF----PEEKADGHGGF---SIQF 416
V +S GDIR A+ +LQF +L + S F P +K I F
Sbjct: 323 VITSSCGDIRSALNTLQF-------ILGIIKKKSDTEFINHAPFQKNSKKPKLFKNQILF 375
Query: 417 -----GRDETLSLFHALGKFLHNKRETDNLVK-----MDQDAFVVKDK-FSRLPLKMDAP 465
R+ TL LFHA+GK ++NKR D+L + Q++ V K + R LK++ P
Sbjct: 376 INSITSRETTLGLFHAIGKVVYNKRVGDSLEDRLENTLPQNSLPVHLKVYERRALKIN-P 434
Query: 466 EKVLSQAHGQARPVLDFLHENCWLD 490
+ +L + LH N +LD
Sbjct: 435 DDILDTIPVDYDTYVLALHHN-YLD 458
>gi|344272339|ref|XP_003407990.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Loxodonta
africana]
Length = 684
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 187/436 (42%), Gaps = 70/436 (16%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G+ + + GL N + + W +KYKP + ELA
Sbjct: 51 KNVPSTLENSRFPARKRGKLSSLEQICGLEN-----SKKYLPENEPWVDKYKPETQHELA 105
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 106 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 165
Query: 213 T----PTIWQEYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
P + + N ++ L+ Y S++ F+ F+ R +Y + I+L
Sbjct: 166 VSPDFPKDDFKEIFNTESSLQLFPYQSQMAVFKEFLLRATKYNKLQMVGDDLRTNKKIIL 225
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++D P R A + L + L V+ P ++++ D T Q + I +
Sbjct: 226 VEDFPNQFYRDA-QILHEILRKYVQIGRCPLIFIISDSLSGD----TNQRLLFPKEIQEE 280
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI-------DLVAQASGGDIRQAITS 378
+ NP+ + + L++I E + I +L+ Q GDIR AI S
Sbjct: 281 CSISNINFNPVAPTIMMKFLNRIMTTEANKFGGKIIVPDKAFLELLCQGCSGDIRSAINS 340
Query: 379 LQFS----------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDE 420
LQFS SLK D +L+ S KP F ++ G G+D
Sbjct: 341 LQFSFTKGENNLWPRKKGVPSLKSDVVLSKSKQRKKPERVFENQEIQAIG------GKDV 394
Query: 421 TLSLFHALGKFLHNKRET----------DNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLS 470
+L LF ALGK L+ KR + +L + ++D +++ PE+V+
Sbjct: 395 SLFLFRALGKILYCKRASLTELGSPRLPSHLSEHERDTLLIQ------------PEEVVE 442
Query: 471 QAHGQARPVLDFLHEN 486
+H +LH+N
Sbjct: 443 MSHMPGELFNLYLHQN 458
>gi|340521258|gb|EGR51493.1| hypothetical protein TRIREDRAFT_120447 [Trichoderma reesei QM6a]
Length = 876
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 169/379 (44%), Gaps = 77/379 (20%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RFL PSR + AS+ + W+E++ PR+L+ELAV +KKV +VR W E+ +G
Sbjct: 181 RFLKPSRPAAI--------DASNDDLRPWSERFGPRNLDELAVHKKKVTDVRKWLEDVMG 232
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +L++ G AG GKT TVR +A+ +G + EW P N G +
Sbjct: 233 ---GRMRQRLLILKGAAGTGKTTTVRLLANDMGCEILEWKNPA--------GNAVNG--F 279
Query: 231 TSKLDEFENFVERIRRYGS-----------------TSPSIPGESKSSAILLIDDLPVTN 273
S +FE+F+ R ++G+ S S S I+LI++ P T
Sbjct: 280 VSASSQFEDFLGRGGKFGALDLEDAEPLSTPASSSKPSQSQQPGSNGKKIILIEEFPNTF 339
Query: 274 GR--TAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV------------DSTAQSFEEL 319
R TA R+ + + +T P+ + AD + +T+ S + L
Sbjct: 340 SRSSTALSSFRRTITQYL-ATQTPSLHMFGHQTPADPITPVVLVISETLLTTTSASADSL 398
Query: 320 QS-------ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG- 369
+ IL G + NPI + + L + ++E + LV + G
Sbjct: 399 TAHRLLGPEILRHPGVGLIEFNPIAPSLLAKALEVVVQKESRKSGRRRTPGPLVLKRLGE 458
Query: 370 -GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------R 418
GDIR AI+SL+F LK D + SK F ++K G ++ G R
Sbjct: 459 IGDIRSAISSLEFLCLKGDQDADWG---SKVTFTKQKKGAKDGIALTRGEEESLEQISQR 515
Query: 419 DETLSLFHALGKFLHNKRE 437
+ +L +FHA+GK ++NKR+
Sbjct: 516 EASLGIFHAVGKVVYNKRD 534
>gi|67078464|ref|NP_001019949.1| cell cycle checkpoint protein RAD17 [Rattus norvegicus]
gi|66910935|gb|AAH98057.1| RAD17 homolog (S. pombe) [Rattus norvegicus]
Length = 686
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 190/430 (44%), Gaps = 66/430 (15%)
Query: 96 PCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQR 155
P +LE + + GR L + GL +++ S + W +KYKP + ELAV +
Sbjct: 53 PSTLESNRLSARKRGR-LPLEQTNGL-----ETSKEYLSDDEPWVDKYKPETQHELAVHK 106
Query: 156 KKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPT 215
KK+EEV W + ++ + K K ++L+ITG G GKT T++ ++ LG ++ EW P
Sbjct: 107 KKIEEVETWLKTQVLEVKPKHGGSILLITGPPGCGKTTTIKILSKELGIQVQEWVNP--- 163
Query: 216 IWQEY-------MHNCKTG---LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
I Q++ + N ++ + Y S++ F +F+ R +Y + I+L
Sbjct: 164 ILQDFQKDDYKELFNSESNFSVIPYQSQIAVFNDFLLRATKYNKLQMLGDALTTDKKIIL 223
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R A L + L V P ++++ DS ++I +
Sbjct: 224 VEDLPNQFYRDA-NALHEILRKYVHIGRCPLVFIVSDSVSGDS----NHRLLFPKNIQEE 278
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--------DLVAQASGGDIRQAIT 377
++ NP+ + + L++I E S + E+I +L+ Q GDIR AI
Sbjct: 279 CSVSNISFNPVAPTIMMKFLNRIVTIEA-SKNGEKITVPNKASLELLCQGCSGDIRSAIN 337
Query: 378 SLQFSSLKQD---------PMLNLSLSISKPNFPEEKADGHGGFSIQF--GRDETLSLFH 426
SLQFSS K + L SISK + IQ G+D +L LF
Sbjct: 338 SLQFSSSKGENSSWSKKKKMSLKSDASISKAKQKRKHNSTLENQEIQAIGGKDVSLFLFR 397
Query: 427 ALGKFLHNKRE----------TDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQA 476
ALGK L+ KR +L + D+D +V+ PE+++ +H
Sbjct: 398 ALGKILYCKRAPLTELASPRLPAHLSEHDRDTLLVQ------------PEEIVEMSHMPG 445
Query: 477 RPVLDFLHEN 486
+LH+N
Sbjct: 446 EFFNLYLHQN 455
>gi|354488332|ref|XP_003506324.1| PREDICTED: cell cycle checkpoint protein RAD17 [Cricetulus griseus]
gi|344248235|gb|EGW04339.1| Cell cycle checkpoint protein RAD17 [Cricetulus griseus]
Length = 683
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 174/402 (43%), Gaps = 37/402 (9%)
Query: 115 PSRFEGLVNPDHDSASASSSTQQL-----WAEKYKPRSLEELAVQRKKVEEVRAWFEERL 169
P+R G ++ + +S + L W +KYKP + ELAV +KK+EEV W + +
Sbjct: 62 PARKRGKLSSLQQTYGVETSKEYLSDIEPWVDKYKPETQHELAVHKKKIEEVETWLKAEV 121
Query: 170 GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE 229
+ K K ++L+ITG G GKT T++ ++ G ++ EW P +Q+ + LE
Sbjct: 122 LEMKPKQGGSILLITGPPGCGKTTTIKILSKEHGIQVQEWVNPVLPDFQKDEYKELLNLE 181
Query: 230 -------YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR 282
Y S++ F +F+ R +Y + I+L++DLP R + L
Sbjct: 182 SKVYIVPYQSQIAVFNDFLLRATKYNKLQMLGDDLTTDRKIILVEDLPNQFYRDS-HALH 240
Query: 283 QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
+ L V+ P ++++ DS Q + I + ++ NP+ +
Sbjct: 241 EVLRKYVQIGRCPLVFIISDSVSGDS----NQRLLFPKKIQEECSIANISFNPVAPTIMM 296
Query: 343 RTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITSLQFSSLKQDPML----- 390
+ L++I E ++L+ Q GDIR AI SLQFSS K + L
Sbjct: 297 KFLNRIMTIEASKNGGRVVVPDKMSLELLCQGCSGDIRSAINSLQFSSSKGESSLWSKKK 356
Query: 391 ------NLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKM 444
+ S SKP A + G+D +L LF ALGK L++KR L ++
Sbjct: 357 RTSLKSDAERSKSKPRKKHNNALENQEIQAIGGKDASLFLFRALGKILYSKRAP--LTEL 414
Query: 445 DQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
D + + PE+++ +H +LH+N
Sbjct: 415 DYAPLPAHLSEHERDMLLVQPEEIVEMSHMPGDFFNLYLHQN 456
>gi|432104569|gb|ELK31181.1| Cell cycle checkpoint protein RAD17 [Myotis davidii]
Length = 684
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 196/456 (42%), Gaps = 73/456 (16%)
Query: 72 LVNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASA 131
+ N L++ +SS ++ KN P +LE G + + GL N +
Sbjct: 32 ISNTATSLSVNNSSHRR----KNVPSTLESSRFPTRKRGTLSSSEQIHGLEN-----SKE 82
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
S S + W +KYKP + ELAV +KK+EEV W + + + + K ++L+ITG G GK
Sbjct: 83 SLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAEVLERQSKQGGSILLITGPPGCGK 142
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERI 244
T T++ ++ LG ++ EW P + + + + N ++ Y S++ F+ F+ R
Sbjct: 143 TTTIKILSKELGIQVQEWINPVLSDFLKDDFKEIFNYESSFHIFPYQSQITVFKEFLLRA 202
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
+Y I+L++DLP R + L + L V+ P ++++
Sbjct: 203 TKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYVQIGRCPLIFIISDSL 261
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-------LS 357
D+ Q + I + ++ NP+ + + L++I E
Sbjct: 262 SGDN----NQRLLFPKEIQEECAISSISFNPVAPTIMMKFLNRIVSIEAKKNGGNTAVPD 317
Query: 358 TEQIDLVAQASGGDIRQAITSLQF----------------SSLKQDPMLNLS-LSISKPN 400
++L+ Q GDIR AI SLQF SSLK D +L+ S S
Sbjct: 318 KTSLELLCQGCSGDIRSAINSLQFSSSKGRNNLCPRKKGMSSLKSDAVLSKSRRKKSDKV 377
Query: 401 FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR----ETD------NLVKMDQDAFV 450
F ++ G G+D +L LF ALGK L+ KR E D +L + ++D +
Sbjct: 378 FENQEVQAIG------GKDVSLFLFRALGKILYCKRASVTEVDSPRLPSHLSEYERDTLL 431
Query: 451 VKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
V PE+V+ +H A +LH+N
Sbjct: 432 VH------------PEEVVEMSHMPAELFNLYLHQN 455
>gi|400603352|gb|EJP70950.1| Rad17 cell cycle checkpoint protein [Beauveria bassiana ARSEF 2860]
Length = 1285
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 70/371 (18%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RF+ P R N D D + W+E+Y PR+L+ELAV +KKV +VR W EE +
Sbjct: 611 RFMKPPR---PTNADDDDL-------RPWSERYGPRNLDELAVHKKKVADVRRWLEEVV- 659
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +L++ G AG GKT T+R +A +G L EW P + N TG +
Sbjct: 660 --SGRLRQRLLILKGAAGSGKTTTIRLLAKEMGCELLEWRNP--------VGNAGTG--F 707
Query: 231 TSKLDEFENFVERIRRYGSTSPSIPGESKSSA----------ILLIDDLP-VTNGRTAFE 279
S +F++F+ R ++G+ P + +++ I+LI++ P + ++
Sbjct: 708 VSSSAQFQDFLGRGGKFGALDLDSPSSTSTASSNANTDNDKRIMLIEEFPNTFSRSSSTL 767
Query: 280 RLRQCLLLLVRSTHIPTAVVLTECGKADSVD------------STAQSFEELQS------ 321
+ LL S H+P+ V ++ G+ + V +T+ S + L +
Sbjct: 768 SSFRGALLQFLSNHVPSLSVFSQYGRREPVKPVILVISETLLTTTSASADSLTAHRLLGP 827
Query: 322 -ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--GDIRQAI 376
IL G + N I + + L + +E + +V + G GD+R AI
Sbjct: 828 EILGHPGVGVIEFNAIAPSLLAKALELVVLKEARKSGRRRTPGPMVLKRLGEIGDVRSAI 887
Query: 377 TSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDETLSLFH 426
+SL+F LK D + + ++ F ++K G + G R+ +L +FH
Sbjct: 888 SSLEFLCLKGDQVADWGAKVA---FTKQKKSTKDGIGMTQGEQDSLELVSQREASLGIFH 944
Query: 427 ALGKFLHNKRE 437
A+GK ++NKRE
Sbjct: 945 AVGKVVYNKRE 955
>gi|73950127|ref|XP_535265.2| PREDICTED: cell cycle checkpoint protein RAD17 [Canis lupus
familiaris]
Length = 680
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 175/400 (43%), Gaps = 64/400 (16%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
S + W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT
Sbjct: 83 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAKVIERQPKQGGSILLITGPPGCGKTT 142
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRR 246
TV+ ++ G ++ EW P +Q + + N ++ Y S++ F+ F+ R +
Sbjct: 143 TVKILSKEHGIQVQEWSNPILPDFQKDDFKEIFNPESSFHVFPYQSQIAVFKEFLLRATK 202
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
Y I+L++DLP R + L + L V + P ++++
Sbjct: 203 YNKLQMLGDDLRTDKRIILVEDLPNQFYRDS-HTLHEILRRYVHTGRCPLIFIISDSLSG 261
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI----- 361
D+ Q + I + ++ NP+ + + L++I E I
Sbjct: 262 DN----NQRLLFPKEIQEECAIANISFNPVAPTIMMKFLNRIVTMEANKNGGNTIVPDKT 317
Query: 362 --DLVAQASGGDIRQAITSLQF----------------SSLKQDPMLNLSLSISKPN--F 401
+L+ Q GDIR AI SLQF SS+K D +L+ S K + F
Sbjct: 318 SLELLCQGCSGDIRSAINSLQFSSSKGANSLWPRKKGISSIKSDAVLSKSKRRKKTDTIF 377
Query: 402 PEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLK 461
++ G G+D +L LF ALGK L+ KR + L ++D RLP
Sbjct: 378 ENQEVQAIG------GKDVSLFLFRALGKILYCKRAS--LTELDS---------PRLPSH 420
Query: 462 MDA---------PEKVLSQAHGQARPVLDFLHENCWLDIM 492
+ PE+V+ +H Q +LH+N ++D
Sbjct: 421 LSEHERDTLLVQPEEVVEMSHMQGELFNLYLHQN-YIDFF 459
>gi|28848618|gb|AAO13093.1| Rad17 [Xenopus laevis]
Length = 674
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 178/398 (44%), Gaps = 50/398 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D++ + S W +KY+P ELAV +KK+EEV A + + K +L++T
Sbjct: 72 DNNQHTFDYSQNDPWIDKYRPEIQAELAVHKKKIEEVEACLKTHVEKRPQKQGGQILLLT 131
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE-------- 236
G G GKTAT++ + +G ++ EW P + QE+ + + ++
Sbjct: 132 GPPGCGKTATIQVLTKEMGIQVQEWINP---LMQEFKQDLPEVFDRDTRFQPFTSQSQTS 188
Query: 237 -FENFVERIRRYGSTSPSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTH 293
F +F+ R +Y + GES S+ I+++DD+P R L L V++
Sbjct: 189 LFHDFLLRANKYNKL--QMVGESLSTDRKIIVVDDMPNQFYRDP-SALHDILRRFVKTGR 245
Query: 294 IPTAVVLTECGKADSVDSTAQSF-EELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
P ++++ +S + F +E+Q LV ++ NP+ ++ + L++I E
Sbjct: 246 CPLVFIISDSLSGES--HQRRLFPKEIQEELV---VNNISFNPVAPTTMTKVLTRIASTE 300
Query: 353 QYSLSTEQI-------DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK------- 398
+ + I +L+ S GDIR AI SLQFS+ + + N S S S+
Sbjct: 301 ANASGGKIIIPDKASLELICTGSSGDIRSAINSLQFSARQGSSLKNDSWSKSRGKASKSG 360
Query: 399 ------PNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFV 450
E + G +Q G+D +L LF ALGK L+ KR+ V D D +
Sbjct: 361 KPSSKSKTKKEPRKGGENVDEVQAIGGKDASLFLFRALGKILYCKRDP---VPDDTDVYR 417
Query: 451 VKDKFSRL--PLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ S L + PE V+ ++H +LH+N
Sbjct: 418 LPAHLSEYNRDLLLILPEAVVEKSHMNGELFNLYLHQN 455
>gi|348539226|ref|XP_003457090.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Oreochromis
niloticus]
Length = 630
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 32/320 (10%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY PRS ELAV +KK+EEV W + +L++TG +G GKTATVR +
Sbjct: 75 WVEKYSPRSQAELAVHKKKIEEVEKWIRVHTNT-----KSGILLLTGPSGCGKTATVRVL 129
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCK-TGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ +G R+ EW +PT H + G +S+ +F++F+ R +Y + G
Sbjct: 130 SLEMGLRVQEWISPTNLEAYSSSHEWRMNGFSSSSQSSQFQDFLLRANKYNCLKMAGDGG 189
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
S ++L++DLP R L + L VR++ P +++ ++ F
Sbjct: 190 VTHSKLILVEDLPNQFYRQPGA-LHEILRGFVRTSQCPLVFIVS----DSLSGDSSSRFL 244
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ-------IDLVAQASGG 370
+ I + G ++ NP+ ++ + L+ I QE ++ + S G
Sbjct: 245 FPKDIQEELGISSISFNPVAPTAMMKVLTCISTQEAAKSCRSVCVPDQTLLETLCSGSSG 304
Query: 371 DIRQAITSLQFSSLKQDPMLNLSLSI-------------SKPNFPEEKADGHGGFSIQFG 417
DIR AI SLQFS L D ++ + S + ++K+ +I G
Sbjct: 305 DIRSAINSLQFSCLSTDSCTSVETGLWRTKKDRSLCRAGSTTSQRKKKSKQEEELAIG-G 363
Query: 418 RDETLSLFHALGKFLHNKRE 437
+D +L LF ALGK LH KRE
Sbjct: 364 KDASLFLFRALGKILHCKRE 383
>gi|431907806|gb|ELK11413.1| Cell cycle checkpoint protein RAD17 [Pteropus alecto]
Length = 683
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 182/436 (41%), Gaps = 70/436 (16%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE G+ + +F GL N + S + W +KYKP + ELA
Sbjct: 50 KNVPSTLESCRFPTRKRGKLSSSEQFYGLEN-----SEEYLSENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + + + + K ++L+ITG G GKT T++ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKSEVLERQPKQGGSILLITGPPGCGKTTTIKILSKEHGIQVQEWINP 164
Query: 213 T-PTIWQEYMHNCKTG------LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
P ++ + Y S++ F+ F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKEIFSPESSFHIFPYQSQIAVFKEFLLRATKYNKLQMLGDDLKTDKKIIL 224
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L V+ P ++++ D+ Q + I +
Sbjct: 225 VEDLPNQFYRDS-HTLHEVLRKYVQIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 279
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYS-------LSTEQIDLVAQASGGDIRQAITS 378
++ NP+ + + L++I E ++L+ GDIR AI S
Sbjct: 280 CAISNISFNPVAPTIMMKFLNRIMTIEANKNGGNITVPDKTSLELLCHGCSGDIRSAINS 339
Query: 379 LQF----------------SSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDE 420
LQF SSLK D L+ S KP+ F ++ G G+D
Sbjct: 340 LQFSSSKGGNSLCPRKKGISSLKSDAALSKSKRRKKPDKVFENQEVQAIG------GKDV 393
Query: 421 TLSLFHALGKFLHNKRET----------DNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLS 470
+L LF ALGK L+ KR + +L + ++D +V+ PE+V+
Sbjct: 394 SLFLFRALGKILYCKRASVTELDSPRLPPHLSEYERDTLLVQ------------PEEVVE 441
Query: 471 QAHGQARPVLDFLHEN 486
+H +LH+N
Sbjct: 442 MSHMPGELFNLYLHQN 457
>gi|3758878|emb|CAA09868.1| cell cycle checkpoint protein [Mus musculus]
Length = 687
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 193/433 (44%), Gaps = 72/433 (16%)
Query: 96 PCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQR 155
P +LE + + GR L+ + GL +++ S + W +KYKP + ELAV +
Sbjct: 53 PSTLESNRLSARKRGR-LSLEQTHGL-----ETSRERLSDNEPWVDKYKPETQHELAVHK 106
Query: 156 KKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPT 215
KK+EEV W + ++ + K K +VL+ITG G GKT T++ ++ LG ++ EW P
Sbjct: 107 KKIEEVETWLKAQVLEVKPKQGGSVLLITGPPGCGKTTTIKILSKELGIQVQEWVNPILP 166
Query: 216 IWQEYMHNCKTGLE-------YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDD 268
+Q+ + LE Y S++ F +F+ R +Y + I+L+++
Sbjct: 167 DFQKDDYKELLSLESNFSVVPYQSQIAVFNDFLLRATKYSKLQMLGDDLTTDKKIILVEE 226
Query: 269 LPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGA 328
LP R L + L V+ P ++++ D+ Q ++I +
Sbjct: 227 LPNQFYRDP-NALHEILRKHVQIGRCPLVFIVSDSVSGDN----NQRLLFPRNIQEECSV 281
Query: 329 RKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--------DLVAQASGGDIRQAITSLQ 380
++ NP+ + + L++I E S + E+I +L+ Q GDIR AI SLQ
Sbjct: 282 SNISFNPVAPTIMMKFLNRIVTIEA-SKNGEKIIVPNKTSLELLCQGCSGDIRSAINSLQ 340
Query: 381 FS---------------SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF--GRDETLS 423
FS SLK D ++ S K N E + IQ G+D +L
Sbjct: 341 FSSSKGENSSWSKKKRMSLKSDAAISKSKQKKKHNSTLENQE------IQAIGGKDVSLF 394
Query: 424 LFHALGKFLHNKR----ETD------NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH 473
LF ALGK L+ KR E D +L + D+D +V+ PE+++ +H
Sbjct: 395 LFRALGKILYCKRAPLTELDSPRLPAHLSEHDRDTLLVQ------------PEEIVEMSH 442
Query: 474 GQARPVLDFLHEN 486
+LH+N
Sbjct: 443 MPGDFFNLYLHQN 455
>gi|348550356|ref|XP_003460998.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Cavia
porcellus]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 192/450 (42%), Gaps = 67/450 (14%)
Query: 75 PKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSS 134
P L + +S+ ++ KN P +LE G+ S E + P++ S S
Sbjct: 36 PATSLGVNNSNHRR----KNVPSTLESSRAPAGKGGKL---SSLEQIYGPENFKDYLSES 88
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+ W +KYKP + ELAV +KKVEEV +W + + + + + +VL+ITG G GKT T
Sbjct: 89 --EPWVDKYKPETQHELAVHKKKVEEVESWLKAEVLERQREQGGSVLLITGPPGCGKTTT 146
Query: 195 VRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRY 247
++ ++ G + EW P +Q + + N ++ Y S++ F+ F+ R +Y
Sbjct: 147 IKILSKEHGIEVQEWINPVLPDFQKDDFKELFNFESSFHKFPYQSQITVFKEFLLRATKY 206
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
I+L++DLP R L L V+ P ++++ D
Sbjct: 207 NKLQMLGDDLRTDKKIILVEDLPNQFYRDP-HTLHDVLRKYVQIGRCPLIFIISDSANGD 265
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI------ 361
+ + +E+Q + ++ NP+ + + L++I E + I
Sbjct: 266 N-NHRLLFPKEIQE---ECSISTISFNPVAPTIMMKFLNRIVTMEANKNGGKIIVPDKTS 321
Query: 362 -DLVAQASGGDIRQAITSLQFS---------------SLKQDPMLNLSLSISKPNFPEEK 405
+L+ Q GDIR AI SLQFS SLK D L+ S KP+ E
Sbjct: 322 LELLCQGCSGDIRSAINSLQFSSSKGESSLWPRKKGMSLKSDAALSKSKRRKKPDTVFEN 381
Query: 406 ADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDA- 464
+ F G+D +L LF ALGK L+ KR L ++D RLP +
Sbjct: 382 QE----FQAVGGKDVSLFLFRALGKILYCKRAP--LTELDS---------PRLPSHLSEY 426
Query: 465 --------PEKVLSQAHGQARPVLDFLHEN 486
PE+V+ +H +LH+N
Sbjct: 427 ERDTLLIQPEEVVEMSHIPGELFNLYLHQN 456
>gi|113199765|ref|NP_035363.2| cell cycle checkpoint protein RAD17 [Mus musculus]
gi|113199779|ref|NP_001037836.1| cell cycle checkpoint protein RAD17 [Mus musculus]
gi|62287500|sp|Q6NXW6.2|RAD17_MOUSE RecName: Full=Cell cycle checkpoint protein RAD17
gi|3641291|gb|AAC36335.1| RF-C/activator 1 homolog [Mus musculus]
gi|74140990|dbj|BAE22079.1| unnamed protein product [Mus musculus]
gi|148668483|gb|EDL00802.1| RAD17 homolog (S. pombe) [Mus musculus]
Length = 688
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 197/442 (44%), Gaps = 73/442 (16%)
Query: 96 PCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQR 155
P +LE + + GR L+ + GL +++ S + W +KYKP + ELAV +
Sbjct: 53 PSTLESNRLSARKRGR-LSLEQTHGL-----ETSRERLSDNEPWVDKYKPETQHELAVHK 106
Query: 156 KKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPT 215
KK+EEV W + ++ + K K +VL+ITG G GKT T++ ++ LG ++ EW P
Sbjct: 107 KKIEEVETWLKAQVLEVKPKQGGSVLLITGPPGCGKTTTIKILSKELGIQVQEWVNPILP 166
Query: 216 IWQEYMHNCKTGLE-------YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDD 268
+Q+ + LE Y S++ F +F+ R +Y + I+L+++
Sbjct: 167 DFQKDDYKELLSLESNFSVVPYQSQIAVFNDFLLRATKYSKLQMLGDDLTTDKKIILVEE 226
Query: 269 LPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGA 328
LP R L + L V+ P ++++ D+ Q ++I +
Sbjct: 227 LPNQFYRDP-NALHEILRKHVQIGRCPLVFIVSDSVSGDN----NQRLLFPRNIQEECSV 281
Query: 329 RKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--------DLVAQASGGDIRQAITSLQ 380
++ NP+ + + L++I E S + E+I +L+ Q GDIR AI SLQ
Sbjct: 282 SNISFNPVAPTIMMKFLNRIVTIEA-SKNGEKIIVPNKTSLELLCQGCSGDIRSAINSLQ 340
Query: 381 FS---------------SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF--GRDETLS 423
FS SLK D ++ S K N E + IQ G+D +L
Sbjct: 341 FSSSKGENSSWSKKKRMSLKSDAAISKSKQKKKHNSTLENQE------IQAIGGKDVSLF 394
Query: 424 LFHALGKFLHNKR----ETD------NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH 473
LF ALGK L+ KR E D +L + D+D +V+ PE+++ +H
Sbjct: 395 LFRALGKILYCKRAPLTELDSPRLPAHLSEHDRDTLLVQ------------PEEIVEMSH 442
Query: 474 GQARPVLDFLHENCWLDIMRQT 495
+LH+N ++D +
Sbjct: 443 MPGDFFNLYLHQN-YIDFFAEV 463
>gi|330790974|ref|XP_003283570.1| hypothetical protein DICPUDRAFT_74539 [Dictyostelium purpureum]
gi|325086553|gb|EGC39941.1| hypothetical protein DICPUDRAFT_74539 [Dictyostelium purpureum]
Length = 1023
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 174/371 (46%), Gaps = 47/371 (12%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG--DSKDKFSTNVLVITGQAGVGKTATV 195
++ +K+ P S EL V + +V+ V+ WF++RL +S S +L +TG GVGK+ V
Sbjct: 420 MFIDKHIPISEGELVVHKTRVDRVKIWFQDRLKELNSSYPLSEKLLFLTGPTGVGKSTLV 479
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
R ++ + + EW P + + + N T Y+S + EF+ +V +Y S S+
Sbjct: 480 RVLSKTMDFEIVEWINPPIVVTKNFDDNLST--PYSSTISEFKKWV----KYNSQGFSM- 532
Query: 256 GESKSSAILLIDDLP-VTN-GRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
+ + +L I+D+P VTN R F ++ + L ++ P VL++ +S
Sbjct: 533 FSTNINKVLFIEDIPNVTNENRLEFLKIFENFL---ENSLFPMVFVLSDSFTGNS--GLY 587
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY--SLSTEQIDLVAQASGGD 371
Q F I + + NP+ +++ L KI +E Y ++S Q++ S GD
Sbjct: 588 QLFPN-SFISNNRNIFHIQFNPVAPSYLRKLLQKIAVEEGYGNAVSQSQLNSFVDESAGD 646
Query: 372 IRQAITSLQFSSL----------------KQDPMLNLSLSISKPNFPEEKADGHGGFSIQ 415
IR AI SL+F + KQ P N + E K +G +
Sbjct: 647 IRAAIFSLEFFCVGRKHENPQTSKLKKPRKQQPTSNHTTE------DESKVNG----VLP 696
Query: 416 FGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQ 475
RD L+LFH++GK L+NKR ++ + + + K+KF R + E+V +H
Sbjct: 697 RNRDSILTLFHSIGKILYNKRIANSNPYVQGETW-YKEKFHR-ETPENVVEEVFENSHID 754
Query: 476 ARPVLDFLHEN 486
++F+HEN
Sbjct: 755 YNTFINFVHEN 765
>gi|44890691|gb|AAH66855.1| RAD17 homolog (S. pombe) [Mus musculus]
Length = 688
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 197/442 (44%), Gaps = 73/442 (16%)
Query: 96 PCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQR 155
P +LE + + GR L+ + GL +++ S + W +KYKP + ELAV +
Sbjct: 53 PSTLESNRLSARKRGR-LSLEQTHGL-----ETSRERLSNNEPWVDKYKPETQHELAVHK 106
Query: 156 KKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPT 215
KK+EEV W + ++ + K K +VL+ITG G GKT T++ ++ LG ++ EW P
Sbjct: 107 KKIEEVETWLKAQVLEVKPKQGGSVLLITGPPGCGKTTTIKILSKELGIQVQEWVNPILP 166
Query: 216 IWQEYMHNCKTGLE-------YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDD 268
+Q+ + LE Y S++ F +F+ R +Y + I+L+++
Sbjct: 167 DFQKDDYKELLSLESNFSVVPYQSQIAVFNDFLLRATKYSKLQMLGDVLTTDKKIILVEE 226
Query: 269 LPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGA 328
LP R L + L V+ P ++++ D+ Q ++I +
Sbjct: 227 LPNQFYRDP-NALHEILRKHVQIGRCPLVFIVSDSVSGDN----NQRLLFPRNIQEECSV 281
Query: 329 RKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--------DLVAQASGGDIRQAITSLQ 380
++ NP+ + + L++I E S + E+I +L+ Q GDIR AI SLQ
Sbjct: 282 SNISFNPVAPTIMMKFLNRIVTIEA-SKNGEKIIVPNKTSLELLCQGCSGDIRSAINSLQ 340
Query: 381 FS---------------SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF--GRDETLS 423
FS SLK D ++ S K N E + IQ G+D +L
Sbjct: 341 FSSSKGENSSWSKKKRMSLKSDAAISKSKQKKKHNSTLENQE------IQAIGGKDVSLF 394
Query: 424 LFHALGKFLHNKR----ETD------NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH 473
LF ALGK L+ KR E D +L + D+D +V+ PE+++ +H
Sbjct: 395 LFKALGKILYCKRAPLTELDSPRLPAHLSEHDRDTLLVQ------------PEEIVEMSH 442
Query: 474 GQARPVLDFLHENCWLDIMRQT 495
+LH+N ++D +
Sbjct: 443 MSGDFFNLYLHQN-YIDFFAEV 463
>gi|157074010|ref|NP_001096714.1| cell cycle checkpoint protein RAD17 [Bos taurus]
gi|151553606|gb|AAI48876.1| RAD17 protein [Bos taurus]
gi|296475885|tpg|DAA18000.1| TPA: RAD17 homolog [Bos taurus]
Length = 682
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 201/478 (42%), Gaps = 73/478 (15%)
Query: 53 PDVQKKNVEHFLTPSRFEGLVNPKRDLALGSSS---RQQLWTNKNKPCSLEEHAIQKENV 109
P V V +++ PS F+G A+ ++S K P +LE
Sbjct: 8 PKVSSTKVTNWVDPS-FDGFSETTSISAITATSLSVNNSSLRRKKVPSTLESSRFPASKG 66
Query: 110 GRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL 169
G + + GL N + S + W +KYKP + ELAV +KK+EEV W + +
Sbjct: 67 GNLSSSKQICGLEN-----SKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAEV 121
Query: 170 GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCK 225
+ + K ++L+ITG G GKT T++ +A G ++ EW P +Q + + N +
Sbjct: 122 LERQPKQGGSILLITGPPGCGKTTTIKILAKEHGIQVQEWINPVLPEFQKDDFKEILNPE 181
Query: 226 TGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR 282
+ Y S++ F+ F+ R +Y I+L++DLP R + L
Sbjct: 182 SSFHIFPYQSQIAVFKEFLLRATKYNQLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLH 240
Query: 283 QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
+ L V+ P ++++ D+ +Q + I + ++ NP+ +
Sbjct: 241 EVLRKYVQIGRCPLIFIISDSLSGDN----SQRLLFPKEIQEECAISNISFNPVAPTIMM 296
Query: 343 RTLSKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQF--------------- 381
+ L++I E + ++ + Q GDIR AI SLQF
Sbjct: 297 KFLNRIVTVEANKNGGKIVPDKTSLEFLCQGCSGDIRSAINSLQFSSSTGKNNLRPRKKG 356
Query: 382 -SSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR-- 436
SSLK D +L+ S K + F ++ G G+D +L LF ALGK L+ KR
Sbjct: 357 MSSLKSDVVLSKSKRRQKTDRIFENQEVQAIG------GKDVSLFLFRALGKILYCKRTP 410
Query: 437 --ETD------NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
E D +L + D+D +V+ PE+V+ +H +LH+N
Sbjct: 411 VTEVDSPRLPSHLSEYDRDTLLVQ------------PEEVVEMSHMPGELFNLYLHQN 456
>gi|440911343|gb|ELR61025.1| Cell cycle checkpoint protein RAD17 [Bos grunniens mutus]
Length = 682
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 201/478 (42%), Gaps = 73/478 (15%)
Query: 53 PDVQKKNVEHFLTPSRFEGLVNPKRDLALGSSS---RQQLWTNKNKPCSLEEHAIQKENV 109
P V V +++ PS F+G A+ ++S K P +LE
Sbjct: 8 PKVSSTKVTNWVDPS-FDGFSETTSISAITAASLSVNNSSLRRKKVPSTLESSRFPASKG 66
Query: 110 GRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL 169
G + + GL N + S + W +KYKP + ELAV +KK+EEV W + +
Sbjct: 67 GNLSSSKQICGLEN-----SKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAEV 121
Query: 170 GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCK 225
+ + K ++L+ITG G GKT T++ +A G ++ EW P +Q + + N +
Sbjct: 122 LERQPKQGGSILLITGPPGCGKTTTIKILAKEHGIQVQEWINPVLPEFQKDDFKEILNPE 181
Query: 226 TGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR 282
+ Y S++ F+ F+ R +Y I+L++DLP R + L
Sbjct: 182 SSFHIFPYQSQIAVFKEFLLRATKYNQLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLH 240
Query: 283 QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
+ L V+ P ++++ D+ +Q + I + ++ NP+ +
Sbjct: 241 EVLRKYVQIGRCPLIFIISDSLSGDN----SQRLLFPKEIQEECAISNISFNPVAPTIMM 296
Query: 343 RTLSKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQF--------------- 381
+ L++I E + ++ + Q GDIR AI SLQF
Sbjct: 297 KFLNRIVTVEANKNGGKIVPDKTSLEFLCQGCSGDIRSAINSLQFSSSTGKNNLRPRKKG 356
Query: 382 -SSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR-- 436
SSLK D +L+ S K + F ++ G G+D +L LF ALGK L+ KR
Sbjct: 357 MSSLKSDVVLSKSKRRQKTDRIFENQEVQAIG------GKDVSLFLFRALGKILYCKRTP 410
Query: 437 --ETD------NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
E D +L + D+D +V+ PE+V+ +H +LH+N
Sbjct: 411 VTEVDSPRLPSHLSEYDRDTLLVQ------------PEEVVEMSHMPGELFNLYLHQN 456
>gi|449545284|gb|EMD36255.1| hypothetical protein CERSUDRAFT_52549 [Ceriporiopsis subvermispora
B]
Length = 599
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 160/349 (45%), Gaps = 50/349 (14%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFST--NVLVITGQA 187
A+++ QLW +KY+P S E+LAV +KKV+ VR W E L G S K +L +TG A
Sbjct: 5 ATAADDQLWVDKYEPTSEEDLAVHKKKVQGVRQWLLESLEGGSNGKLRKYRRILALTGPA 64
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR- 246
GVGKTAT+R +A LG + EW T+ ++Y + G EY ++F+ F+ R R
Sbjct: 65 GVGKTATIRVLARELGFDILEWRN---TMDEQYSLDDDYG-EYEGLSEKFQAFLARAGRC 120
Query: 247 ---YGSTSPSIPGESKSSA-------------ILLIDDLP---VTNGRTAFERLRQCLLL 287
+ +++ S P S S I+L++DLP R AF +
Sbjct: 121 HSIFSASTQSQPPSSAVSGGSSVSSASQPKRQIILLEDLPNILHPGTRDAFHDSLNAFVG 180
Query: 288 LVRSTHIPTAVVLT------ECGKADSVDSTAQSFEELQSI----LVDAGARKVALNPIT 337
P ++++ E G D ST +++ ++ NPI
Sbjct: 181 AGEFGVAPMIIIISDTGVRGEGGDGDVGSSTNAWRARREAVDVRSVLPPNLLASPFNPIA 240
Query: 338 NGSIKRTL-----SKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLN- 391
+++ L S+ + S S E IDL+ +S GDIR AI +LQF+ + +
Sbjct: 241 PKILRKALQTLLRSRFAKSTGVSASKEVIDLIVDSSNGDIRSAIMALQFACIHDADAQSE 300
Query: 392 -LSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETD 439
S SK P R+++L+LFH LGK L+NKR+ D
Sbjct: 301 RGSRKGSKGVIPRAL------LEAVTRREQSLALFHLLGKLLYNKRKDD 343
>gi|426246351|ref|XP_004016958.1| PREDICTED: cell cycle checkpoint protein RAD17 [Ovis aries]
Length = 683
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 187/440 (42%), Gaps = 79/440 (17%)
Query: 103 AIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQ--------------QLWAEKYKPRSL 148
++ ++ R PS E NP + SSS Q + W +KYKP +
Sbjct: 41 SVNNASLRRKKVPSTLESSRNPASKGGNLSSSKQICGLDNSKEYLSENEPWVDKYKPETQ 100
Query: 149 EELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYE 208
ELAV +KK+EEV W + + + + K ++L+ITG G GKT T++ +A G ++ E
Sbjct: 101 HELAVHKKKIEEVETWLKAEVLERQPKQGGSILLITGPPGCGKTTTIKILAKEHGIQVQE 160
Query: 209 WDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSS 261
W P +Q + + N ++ Y S++ F+ F+ R +Y
Sbjct: 161 WINPVLPEFQKDDFKEILNPESSFHIFPYQSQIAVFKEFLLRATKYNQLQMLGDDLRTDK 220
Query: 262 AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQS 321
I+L++DLP R + L + L V+ P ++++ D+ +Q +
Sbjct: 221 KIILVEDLPNQFYRDS-HTLHEVLRKYVQIGRCPLIFIISDSLSGDN----SQRLLFPKE 275
Query: 322 ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQ 374
+ + ++ NP+ + + L++I E + ++ + Q GDIR
Sbjct: 276 VQEECAISNISFNPVAPTIMMKFLNRIVTIEANKNGGKIVVPDKTSLEFLCQGCSGDIRS 335
Query: 375 AITSLQF----------------SSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQF 416
AI SLQF SSLK D +L+ S K + F ++ G
Sbjct: 336 AINSLQFSSSTGKNNLRPRKKGLSSLKSDAVLSKSKRRQKTDRIFENQEVQAIG------ 389
Query: 417 GRDETLSLFHALGKFLHNKR----ETD------NLVKMDQDAFVVKDKFSRLPLKMDAPE 466
G+D +L LF ALGK L+ KR E D +L + D+D +V+ PE
Sbjct: 390 GKDVSLFLFRALGKILYCKRAPVTEVDSPRLPSHLSEYDRDTLLVQ------------PE 437
Query: 467 KVLSQAHGQARPVLDFLHEN 486
+V+ +H +LH+N
Sbjct: 438 EVVEMSHMPGELFNLYLHQN 457
>gi|428186599|gb|EKX55449.1| Rad24 DNA damage checkpoint protein [Guillardia theta CCMP2712]
Length = 544
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 169/359 (47%), Gaps = 33/359 (9%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG--DSKDKFSTNVLVITGQAGVGKTATV 195
+WA+ + P +++EL++ K+ E W + + + K +LV+ G +G GK++ V
Sbjct: 1 MWADHFSPGNMQELSINSAKISEFSTWLDRSMECLRAGHKLFNKILVLRGPSGCGKSSLV 60
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
R +AS G ++ EW + PTI + + + + +EY S+LD F+ R+ ++ +
Sbjct: 61 RLMASQKGLKVVEWKS-KPTISYDRVQSLE--IEYESELDNLVRFLRSSRQLSNSIITFD 117
Query: 256 GESKSS-----AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
E +S ++L+D++P + RLR L+ H+ +V+T +
Sbjct: 118 NEGESGIDHAGVLILLDEVPYMHMEHQRSRLRAELVQFF--NHVRCLLVVTHTDHQSNER 175
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
A Q I G + + +NPI +K+ + +I + +D V Q + G
Sbjct: 176 GLAA---WPQCIFGLPGVQVIQMNPIAKTFLKKGIERIMSAARVGSEKSVVDSVVQWADG 232
Query: 371 DIRQAITSLQF--SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHAL 428
D+R AI SLQ + +++ + LS+ AD G +GR+ + + FHAL
Sbjct: 233 DMRSAINSLQVICAGGRRNRAHSRPLSV---------ADSAG-----YGRESSHTFFHAL 278
Query: 429 GKFLHNKRE-TDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
GK LH K T N + QD V +K + + E+V+ +A + +LD+L EN
Sbjct: 279 GKILHKKSSPTQNPSEASQDE-VNPNKGTEIAAGTGNLEEVVEKAGLTEKILLDYLFEN 336
>gi|350596048|ref|XP_003360695.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Sus scrofa]
Length = 622
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 188/440 (42%), Gaps = 79/440 (17%)
Query: 103 AIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQ--------------QLWAEKYKPRSL 148
++ ++ R PS E +P + SSS Q + W +KYKP +
Sbjct: 67 SVNNSSLRRKKVPSTLESRRSPTRKRGNLSSSKQIYSLENSKEYVSENEPWVDKYKPETQ 126
Query: 149 EELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYE 208
ELAV +KK+EEV W + + + + ++L+ITG G GKTAT++ ++ G ++ E
Sbjct: 127 HELAVHKKKIEEVETWLKVEVLERQPTQGGSILLITGPPGCGKTATIKILSKEHGIQVQE 186
Query: 209 WDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSS 261
W P +Q + + N ++ Y S++ F+ F+ R +Y +
Sbjct: 187 WINPVLPEFQKDDFKEIFNPESSFHIFPYQSQIAVFKEFLLRATKYNKLQMLGDDLTTDK 246
Query: 262 AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQS 321
I+L++DLP R L + L V+ P ++++ D+ + +E+Q
Sbjct: 247 KIILVEDLPNQFYRDP-HILHEVLRRYVQVGRCPLIFIISDSLSGDN-NHRLLFPKEIQE 304
Query: 322 ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI-------DLVAQASGGDIRQ 374
+ ++ NP+ + + L++I +E + I +L+ Q GDIR
Sbjct: 305 ---ECAISNISFNPVAPTIMMKFLNRIVTKEANKNGGKIIVPDKTSLELLCQGCSGDIRS 361
Query: 375 AITSLQF----------------SSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQF 416
AI SLQF SSLK D L+ S KP+ F ++ G
Sbjct: 362 AINSLQFSSSTGKNNLWPRKKGTSSLKSDAALSKSKRRQKPDRVFENQEVQAIG------ 415
Query: 417 GRDETLSLFHALGKFLHNKRET----------DNLVKMDQDAFVVKDKFSRLPLKMDAPE 466
G+D +L LF ALGK L+ KR + +L + ++D ++ PE
Sbjct: 416 GKDVSLFLFRALGKILYCKRASVTELDSPRLPSHLSEYERDTLLIH------------PE 463
Query: 467 KVLSQAHGQARPVLDFLHEN 486
+V+ +H +LH+N
Sbjct: 464 EVVEMSHMPGDLFNLYLHQN 483
>gi|346321781|gb|EGX91380.1| cell cycle checkpoint protein RAD17 [Cordyceps militaris CM01]
Length = 1283
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 169/373 (45%), Gaps = 71/373 (19%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RFL P R + D D ++ W+E++ PRSL+ELAV ++KV +VR W +E +
Sbjct: 605 RFLKPPR-PNKTDDDDD--------RRPWSERFGPRSLDELAVHKRKVSDVRRWLDEVVS 655
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +L++ G AG GKT TVR +A +G L EW P + N TG +
Sbjct: 656 ---GRMRQRLLILKGAAGAGKTTTVRLLAKEMGYELLEWRNP--------VGNAGTG--F 702
Query: 231 TSKLDEFENFVERIRRYGSTSPSIPGESKSSA------------ILLIDDLP-VTNGRTA 277
S +F+ F+ R ++G+ P + ++ I+LI++ P + ++
Sbjct: 703 VSASAQFQEFLGRGGKFGALDLDSPSPTSNAPSNANANADNDKRIMLIEEFPNTFSRSSS 762
Query: 278 FERLRQCLLLLVRSTHIPTAVVLTECGKADSVD------------STAQSFEELQS---- 321
+ LL S+H+P+ + ++ G+ + + +T+ S + L +
Sbjct: 763 TLSSFKGALLQFLSSHVPSLSMFSQPGRREPIKPVILVISETLLTTTSASADSLTAHRLL 822
Query: 322 ---ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--GDIRQ 374
IL G + N I + + L + +E + +V + G GD+R
Sbjct: 823 GPEILTHPGVGVIEFNAIAPSLLAKALELVVLKEARKSGRRRTPGPMVLKKLGEIGDVRS 882
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDETLSL 424
AI+SL+F LK D + ++ F ++K G S+ G R+ +L +
Sbjct: 883 AISSLEFLCLKGDQDADWGAKVA---FTKQKKSTKDGISLTQGEQDSLELISQREASLGI 939
Query: 425 FHALGKFLHNKRE 437
FHA+GK ++NKRE
Sbjct: 940 FHAVGKVVYNKRE 952
>gi|219112105|ref|XP_002177804.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410689|gb|EEC50618.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 571
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 154/327 (47%), Gaps = 46/327 (14%)
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITG 185
H SS LW ++Y P+ + ++ V KKV+EVR W + + D K +L++ G
Sbjct: 64 HTGGDTSSHDNALWIDRYNPQCIADVCVAPKKVQEVRQWIQSAMKDHVHK----LLILVG 119
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEY--MHNCKTGLEYTSKLDEFENFVER 243
G+GK+ +R +A + EW+ T +Y +++ ++ S L F+ F
Sbjct: 120 SPGIGKSTMIRCLAKENRWSISEWNE---TFSNQYSALNSAMHSVDQQSSLSSFQEF--- 173
Query: 244 IRRYGSTSPSIPGESKSS------------AILLIDDLPVTNGRTAFERLRQCLLLLVRS 291
+R+ G+ S+ ES S+ +I+L++ LP + T RLR+ VR+
Sbjct: 174 LRQAGTGYHSLTFESSSNSSTKQDGSQISGSIILLESLPTQHESTQM-RLRELFTEHVRT 232
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
T +PT ++ ++ + +S + ++L + + P T ++KR LS I R
Sbjct: 233 TSVPTVLIFSDVLEGKHKREDLESLVD-PNLLYSDLCLILQIQPCTKQNMKRVLSLIVRA 291
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGG 411
E+ S+ + + + + S GD+R AIT+ Q+ ++ Q S+++ +
Sbjct: 292 ERLSVPSSIYEDLHERSNGDLRSAITTFQYEAMGQ------SMTVKNTD----------- 334
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRET 438
RD LS FHALGK L+ KR T
Sbjct: 335 ---TTNRDRRLSPFHALGKLLYAKRVT 358
>gi|440803947|gb|ELR24830.1| Rad17 cell cycle checkpoint protein [Acanthamoeba castellanii str.
Neff]
Length = 962
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 77/379 (20%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
S A++ +LW++KY P S ++LAV K+V EVR W + L + +L +TG +
Sbjct: 410 SPGAATEGGRLWSDKYDPTSEDDLAVYPKRVAEVRDWLKHALAGRGGR----ILCLTGPS 465
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G GKT L + EW P W + + K L YT+ + EF F++R RY
Sbjct: 466 GGGKT---------LNVGITEWINPATCPWTD--SDRKLALPYTAPIQEFRAFLQRTERY 514
Query: 248 GS-----------TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS--THI 294
S T+ S +++ ++LI+DLP A + LL +R+
Sbjct: 515 PSLVTTTTGTNAPTADSDLSGNQAKRLILIEDLPFLGHLPALRTFQDLLLHHLRTPGPRF 574
Query: 295 PTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
P +++++ DS+ ++ Q I+ R++ + + + L+KI E +
Sbjct: 575 PLVLIISD----DSLGNSPLFRLLPQEIMSHPAFRQIKIAGVAPTRAAKVLAKIAGLEGW 630
Query: 355 SLSTEQ-------IDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
+ + ++ +A+ GGD+R AI +LQ LS ++ AD
Sbjct: 631 KGAGKAARGKATGVNTLAKVCGGDLRSAINALQL------------LSGPGGTLTDQAAD 678
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEK 467
S Q RD LSLFHALGK LHNKR D L + + E+
Sbjct: 679 -----STQ--RDVPLSLFHALGKVLHNKRGDDGLPENEV-------------------EQ 712
Query: 468 VLSQAHGQARPVLDFLHEN 486
V+ QA + +F+HEN
Sbjct: 713 VIEQAGVEPARFTEFVHEN 731
>gi|340377005|ref|XP_003387021.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Amphimedon
queenslandica]
Length = 630
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 180/398 (45%), Gaps = 57/398 (14%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
+AS ++ W KY P+S +LAV +KK+ EV+ W + L + K +L++TG +G
Sbjct: 64 TASGDSETAWNVKYSPKSTADLAVHKKKLTEVQQWIDSALSN---KTQCPILLLTGPSGC 120
Query: 190 GKTATVRQIASHLGARLYEWDTP--TPTIWQEYMHNCKTGLEYT-SKLDEFENFVERIRR 246
GKTATVR I LG + EW P P + ++ E+ S+ +F+NF+ R R
Sbjct: 121 GKTATVRSITQELGVSVTEWSNPFDVPQVGVVDRYSQFQDYEFQESQTKQFQNFLLRGNR 180
Query: 247 YGSTSPSIPGESKSSA----------ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
Y S + + +SA I+LI+DLP N LL +R H P
Sbjct: 181 YPSLNFTTTSSEATSATGGKGERKNKIILIEDLP--NALLRDPSQLHHLLKSMRYFHYP- 237
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
V + ++ S+ S+++ F L I+ + NP+ + ++ R L++I E SL
Sbjct: 238 LVFIVSDSQSSSIGSSSRLFPSL--IVSQLDIHHIHFNPVAHTNMVRALNRIVETEFKSL 295
Query: 357 ----------------STEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPN 400
+ E I+ +A S GDIR A+ LQF+ L+ NL
Sbjct: 296 KESGRHRLKTMPTLLPNKEVIESIAVKSSGDIRSAVNMLQFTCLRGSNNDNLRW------ 349
Query: 401 FPEEKADGHGGF---SIQF-GRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFS 456
K G G S + GRD ++ LF ALGK L+ KR + V D F V +
Sbjct: 350 ----KDPGEMGVVKSSAELGGRDCSMFLFKALGKILYCKRSSTEGV-TDSAPFSVNRRGE 404
Query: 457 RLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
L PE V+ + ++ +LH+N +LD +
Sbjct: 405 LLV----EPEIVIESVNMRSDLFNLYLHQN-YLDFFER 437
>gi|301760263|ref|XP_002915934.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Ailuropoda
melanoleuca]
Length = 708
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 169/388 (43%), Gaps = 51/388 (13%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
S + W +KYKP + ELAV +KK+EEV W + + + + K ++L+ITG G GKT
Sbjct: 111 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKATVLERQPKQGGSILLITGPPGCGKTT 170
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRR 246
T++ ++ G ++ EW P +Q + + N ++ Y S++ F+ F+ R +
Sbjct: 171 TIKILSKEHGIQVQEWINPILPDFQKDDFKEILNPESSFRVFPYQSQIAVFKEFLLRATK 230
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
Y I+L++DLP R + L + L V + P ++++
Sbjct: 231 YNKLQMLGDDLRTDKRIILVEDLPNQFYRDS-HTLHEILRKYVHTGRCPLIFIISDSLSG 289
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-------LSTE 359
D+ Q + I + ++ NP+ + + L++I E
Sbjct: 290 DN----NQRLLFPKEIQEECAIANISFNPVAPTIMMKFLNRIVTMEANKNGGNIIVPDKS 345
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPML------------NLSLSISKPNFPEEKAD 407
+DL+ Q GDIR AI SLQFSS K L + +LS SK ++
Sbjct: 346 SLDLLCQGCSGDIRSAINSLQFSSSKGGSRLWPRKKGMSSIKSDAALSKSKQRKKTDRIF 405
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDA--- 464
+ G+D +L LF ALGK L+ KR + L ++D RLPL +
Sbjct: 406 ENQEVQAIGGKDVSLFLFRALGKILYCKRAS--LSEVDS---------PRLPLHLSEYER 454
Query: 465 ------PEKVLSQAHGQARPVLDFLHEN 486
PE+V+ +H +LH+N
Sbjct: 455 DTLLVHPEEVVEMSHMPGELFNLYLHQN 482
>gi|410948741|ref|XP_003981089.1| PREDICTED: LOW QUALITY PROTEIN: cell cycle checkpoint protein RAD17
[Felis catus]
Length = 707
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 199/479 (41%), Gaps = 92/479 (19%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
S + W +KYKP + ELAV +KK+EEV W + ++ + + K +VL+ITG G GKT
Sbjct: 111 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAKVLERQPKQGGSVLLITGPPGCGKTT 170
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRR 246
T++ ++ G ++ EW P +Q + + N ++ + Y S++ F+ F+ R +
Sbjct: 171 TLKILSKEHGIQVQEWINPILPDFQKDDFKEIFNSESSFQVFPYQSQITVFKEFLLRATK 230
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
Y I+L++DLP R + L + L V + P ++++
Sbjct: 231 YNKLQMLGDDLRTDKRIILVEDLPNQFYRDS-HTLHEILRKYVHTGRCPLIFIISDSLGG 289
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-------LSTE 359
D+ Q + I + ++ NP+ + + L++I E
Sbjct: 290 DN----NQRLLFPREIQEECAISNISFNPVAPTIMMKFLNRIVTMEANKNGRNITVPDKT 345
Query: 360 QIDLVAQASGGDIRQAITSLQF---------------SSLKQDPMLNLSLSISKPN--FP 402
++L+ Q GDIR AI SLQF SSLK D L+ S K + F
Sbjct: 346 SLELLCQGCSGDIRSAINSLQFSSKGENSFWPRKKGTSSLKSDAALSKSKRRKKXDRVFE 405
Query: 403 EEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRET----------DNLVKMDQDAFVVK 452
++ G G+D +L LF ALGK L+ KR + +L + ++D +V+
Sbjct: 406 NQEVQAIG------GKDVSLFLFRALGKILYCKRASLTELDSPRLPSHLSEYERDTLLVQ 459
Query: 453 DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWL-------DIMRQTMFYNLL---- 501
PE+V+ +H +LH+N +L D+MR + F +
Sbjct: 460 ------------PEEVVEMSHMPGELFNLYLHQN-YLDFFVEVDDVMRASEFLSFADILS 506
Query: 502 ---RLQLLLVEYYLEI-------------LIQCLLGGMLFVSQSSGEWTNLLCKKRRSC 544
++ LL +Y I C GG F +W + K R +C
Sbjct: 507 GDWNMRSLLRQYTTSIATRGVMHSNTARGFAHCQGGGSGFRPLHKPQWFFINKKYRENC 565
>gi|281337665|gb|EFB13249.1| hypothetical protein PANDA_003969 [Ailuropoda melanoleuca]
Length = 673
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 172/394 (43%), Gaps = 52/394 (13%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
S + W +KYKP + ELAV +KK+EEV W + + + + K ++L+ITG G GKT
Sbjct: 76 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKATVLERQPKQGGSILLITGPPGCGKTT 135
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRR 246
T++ ++ G ++ EW P +Q + + N ++ Y S++ F+ F+ R +
Sbjct: 136 TIKILSKEHGIQVQEWINPILPDFQKDDFKEILNPESSFRVFPYQSQIAVFKEFLLRATK 195
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
Y I+L++DLP R + L + L V + P ++++
Sbjct: 196 YNKLQMLGDDLRTDKRIILVEDLPNQFYRDS-HTLHEILRKYVHTGRCPLIFIISDSLSG 254
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-------LSTE 359
D+ Q + I + ++ NP+ + + L++I E
Sbjct: 255 DN----NQRLLFPKEIQEECAIANISFNPVAPTIMMKFLNRIVTMEANKNGGNIIVPDKS 310
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPML------------NLSLSISKPNFPEEKAD 407
+DL+ Q GDIR AI SLQFSS K L + +LS SK ++
Sbjct: 311 SLDLLCQGCSGDIRSAINSLQFSSSKGGSRLWPRKKGMSSIKSDAALSKSKQRKKTDRIF 370
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDA--- 464
+ G+D +L LF ALGK L+ KR + L ++D RLPL +
Sbjct: 371 ENQEVQAIGGKDVSLFLFRALGKILYCKRAS--LSEVDS---------PRLPLHLSEYER 419
Query: 465 ------PEKVLSQAHGQARPVLDFLHENCWLDIM 492
PE+V+ +H +LH+N ++D
Sbjct: 420 DTLLVHPEEVVEMSHMPGELFNLYLHQN-YIDFF 452
>gi|330921776|ref|XP_003299557.1| hypothetical protein PTT_10581 [Pyrenophora teres f. teres 0-1]
gi|311326692|gb|EFQ92333.1| hypothetical protein PTT_10581 [Pyrenophora teres f. teres 0-1]
Length = 699
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 59/347 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY P SL+ELAV +KKV +VR W K +L++ G AG GKT T+ +
Sbjct: 19 WTEKYGPASLDELAVHKKKVADVRTWLSHVFSGKARK---RLLLLKGPAGSGKTTTISLL 75
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS-----PS 253
++ LG + EW PT ++ T + S +FE+FV R +GS + P+
Sbjct: 76 SNELGIEMQEWKNPTGSM--------STADSFVSVTAQFEDFVARTAAFGSLAFDDPVPT 127
Query: 254 IPGESKSSAI------LLIDDLPVTNGRT--AFERLRQCLL-LLVRSTHIPTAVVLTECG 304
S SS + +L+++ P T RT A + R +L L +T TA ++
Sbjct: 128 AQTVSPSSQVGRQKQLVLVEEFPNTFTRTSSALQSFRSSVLNYLAANTQSATAFFSSQVN 187
Query: 305 KADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTL 345
V + A SF + IL G + NPI + + L
Sbjct: 188 PELPVTPIVMIISETLLSTNTAAADSFTAHRLLGPDILTHTGVTVIEFNPIAPTYMTKAL 247
Query: 346 SKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM------LNLS 393
I +E + +L + I +A+ GDIR A++SL+F L+ D +N S
Sbjct: 248 DTIIVKEARNSGRKKTLGPQAIQRLAEL--GDIRSAVSSLEFLCLRGDDAEGWGANVNFS 305
Query: 394 LSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDN 440
+ P K + + R+ TL +FH++G+ ++NKR T+N
Sbjct: 306 KKKGPKDIPMTKTE-QESLDMVTQRESTLGIFHSVGRVVYNKRLTEN 351
>gi|384245483|gb|EIE18977.1| hypothetical protein COCSUDRAFT_59902 [Coccomyxa subellipsoidea
C-169]
Length = 569
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 163/388 (42%), Gaps = 59/388 (15%)
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
+ +KK++E+ W E + + +LV++G G GK+ + +A +G + EW P
Sbjct: 1 MHKKKIQEISGWLELQKEPGLRCKAPRMLVLSGPPGCGKSTAMHVLAKEMGFDVCEWQPP 60
Query: 213 TPTIWQEY-MHNCKTGLEYTSKLDEFENFVERIR--------------------RYGSTS 251
PT+W E+ H GL+YTSKLD+FE FV + +
Sbjct: 61 VPTLWDEHRYHAADGGLQYTSKLDDFETFVAHAKLSSLSLQPSTAASDASGAASQQSQNP 120
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
P PG +L+IDDLP G RL L LL + P V+ T +
Sbjct: 121 PPKPGVK----LLVIDDLPHAAGLEQRARLAAALALLAAAARCPVVVIATASSTQGAPGD 176
Query: 312 TAQSF----EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
++ +++Q+ L G ++A NPIT+ + + L + +E LS EQ +A++
Sbjct: 177 RGAAWHGLHKDVQNALDTVGVAQIACNPITDNNAAKALQRAAAEEAMPLSREQALSIARS 236
Query: 368 SGGDIRQAITSLQF--SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLF 425
+ GD+R A+ LQ + + P + + K ++ + RD L F
Sbjct: 237 AAGDLRSALELLQLLCTGVAPLPPQPKTRKVRKAKGSKQAEPELHMPELATARDVALDPF 296
Query: 426 HALGKFLHNKRETDN----LVKMDQD-----------------------AFVVKDKFSRL 458
HA+ K L+NKR + +MD++ V ++ RL
Sbjct: 297 HAIAKLLYNKRGEEGSEAAAGQMDEELKQPLSGGTSFLIQACESAEPAAPLQVAERHRRL 356
Query: 459 PLKMDAPEKVLSQAHGQARPVLDFLHEN 486
PL +PE V ++ FLHEN
Sbjct: 357 PLSF-SPEGVWERSGLDVGTTAGFLHEN 383
>gi|322699208|gb|EFY90972.1| cell cycle checkpoint protein RAD17 [Metarhizium acridum CQMa 102]
Length = 1352
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 163/384 (42%), Gaps = 79/384 (20%)
Query: 105 QKENVGR-FLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRA 163
+ N G FL P R V D D + W+E++ PR+L+ELAV +KKV +VR
Sbjct: 661 ESSNTGSMFLKPPRPANPVGVDDD--------LRPWSERFGPRNLDELAVHKKKVADVRR 712
Query: 164 WFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN 223
W E+ + + +L++ G AG GKT TVR +A+ +G L EW PT
Sbjct: 713 WLEDVM---SGRMRQRILILKGAAGSGKTTTVRLLATDMGCELLEWKNPT---------- 759
Query: 224 CKTGLEYTSKLDEFENFVERIRRYGSTSPSIP-----------GESKSSAILLIDDLPVT 272
+G Y S +F F+ R ++G+ P +S++ I+L+++ P T
Sbjct: 760 TNSGTGYVSVSGQFGEFLGRGGKFGTLDVDEPANTTMKNSNGLAQSRAKRIILVEEFPNT 819
Query: 273 NGR--TAFERLRQCLLLLVRSTHIPTAVVLTECGKADS----------------VDSTAQ 314
R +A R +L + + H P+ L GKA + +T+
Sbjct: 820 FSRSSSALTSFRSTILQYL-AAHTPS---LANFGKASQHRDQISPIVLVISETLLTTTSA 875
Query: 315 SFEELQS-------ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----L 363
S + L + IL G + N I + + L + +E + L
Sbjct: 876 SADSLTAHRLLGPEILRHPGVGVIEFNAIAPSILAKALELVVLKEARKSGRRRTPGPQVL 935
Query: 364 VAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG------ 417
GDIR A++SL+F LK D + ++ F + K S+ G
Sbjct: 936 KRLGEIGDIRNAVSSLEFLCLKGDEDSDWGAKVA---FTKTKKSTRDSISLTKGEAESLE 992
Query: 418 ----RDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+GK ++NKR+
Sbjct: 993 LISQREASLGIFHAVGKVVYNKRD 1016
>gi|189203717|ref|XP_001938194.1| cell cycle checkpoint protein RAD17 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985293|gb|EDU50781.1| cell cycle checkpoint protein RAD17 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 879
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 156/347 (44%), Gaps = 59/347 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY P SL+ELAV ++KV +VR W + K +L++ G AG GKT T+ +
Sbjct: 197 WTEKYGPESLDELAVHKRKVADVRTWLSDVFNGKARK---RLLLLKGPAGSGKTTTISLL 253
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS-----PS 253
+ LG + EW PT + T + S +FE+FV R +GS + P+
Sbjct: 254 SKELGIEMQEWKNPT--------GSMSTSDSFVSVTAQFEDFVARTGTFGSLAFDEPVPT 305
Query: 254 IPGESKSSAI------LLIDDLPVTNGRT--AFERLRQCLL-LLVRSTHIPTAVVLTECG 304
S SS + +L+++ P T RT A + R +L L +T TA ++
Sbjct: 306 AQTASPSSQVGRQKQLVLVEEFPNTFTRTSSAVQSFRSSVLNYLAANTQSATAFFSSQVN 365
Query: 305 KADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTL 345
+V + A SF + IL AG + NPI + + L
Sbjct: 366 PEQAVTPIVMIISETLLSTNTAAADSFTAHRLLGPDILTHAGVSVIEFNPIAPTYMTKAL 425
Query: 346 SKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM------LNLS 393
I +E + +L + I +A+ GDIR A++SL+F L+ D +N S
Sbjct: 426 DTIIVKEARKSGRKKTLGPQAIQRLAEL--GDIRSAVSSLEFLCLRGDDAEGWGANVNFS 483
Query: 394 LSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDN 440
+ + P K + + R+ TL +FH++G+ ++NKR T+N
Sbjct: 484 KKKALKDTPMTKIE-RESLEMVTQRESTLGIFHSVGRVVYNKRLTEN 529
>gi|449514921|ref|XP_002188326.2| PREDICTED: cell cycle checkpoint protein RAD17 [Taeniopygia
guttata]
Length = 764
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 177/380 (46%), Gaps = 42/380 (11%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E+++P + +LAVQ+KK+EEV W + + + K +L++TG G GKTAT++ +
Sbjct: 196 WVERHRPETQNDLAVQKKKIEEVETWLKTHIFQRQPKQGGPILLLTGPPGCGKTATLQIL 255
Query: 199 ASHLGARLYEWDTPTPTIWQE------YMHNCKT-GLEYTSKLDEFENFVERIRRYGSTS 251
A LG ++ EW P + + + H+ + ++ F++F+ R +Y
Sbjct: 256 ARDLGLQVQEWTNPLSLDFTKEDLRSMFGHDSNSHTFPSQAQAALFQDFLLRANKYNKL- 314
Query: 252 PSIPGESKSS--AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
+ GES + ++LI+D+P R L + L VR + P ++++ DS
Sbjct: 315 -QMLGESSENDKKLILIEDIPNQFYRDPGS-LHEILRSFVRRSRCPLVFIISDNFSGDSN 372
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC------RQEQYSLSTEQIDL 363
+ E ++ + + ++ P+ ++ + L++I +E Y+ ++L
Sbjct: 373 QRSLFPAEIVEELCI----FNISFKPVAPTNMMKVLTRIAAAEASMNRENYAPDRTSLEL 428
Query: 364 VAQASGGDIRQAITSLQFSSLK----QDPMLNLSLSISKPNFPEE----------KADGH 409
+ + GDIR AI SLQFSS K + + EE K D
Sbjct: 429 LCRGCSGDIRSAINSLQFSSTKGCSLEKEFWSKKKKKCSTTKCEEAGVSKVRKRSKCDTS 488
Query: 410 GGFSIQF--GRDETLSLFHALGKFLHNKRETDNLVKMDQ-DAFVVKDKFSRLPLKMDAPE 466
IQ G+D ++ LFHALGK ++ KRE + + Q A + + + L ++ PE
Sbjct: 489 EDQEIQAIGGKDASIFLFHALGKIIYCKREAVSEAECPQLPAHLSRHRRDTLLIQ---PE 545
Query: 467 KVLSQAHGQARPVLDFLHEN 486
+++ ++H +LH+N
Sbjct: 546 EIVEKSHMSGSMFNLYLHQN 565
>gi|302674515|ref|XP_003026942.1| hypothetical protein SCHCODRAFT_61600 [Schizophyllum commune H4-8]
gi|300100627|gb|EFI92039.1| hypothetical protein SCHCODRAFT_61600, partial [Schizophyllum
commune H4-8]
Length = 541
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 137/306 (44%), Gaps = 27/306 (8%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW + Y+P + EELAV KKV+ VR WF E L K + +LV+TG AG GKT+TV+
Sbjct: 4 LWVDLYEPTTEEELAVHVKKVDSVRTWFREALTGDKLRKYRRILVLTGPAGTGKTSTVKV 63
Query: 198 IASHLGARLYEW-DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A +G + EW + + + S + F F+ R R S
Sbjct: 64 LAREMGFDIMEWRNEASAGKAYTDWDDYDPDDYAPSAHEPFSTFMSRASRCRDVFSS--- 120
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTA 313
+ I+L++DLP + + L LV+ + + P +++++ G
Sbjct: 121 -NARPHIILLEDLPNILHAGTQQSFHESLRSLVQPSDVVLPPIVIIISDAGL------RG 173
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F+E+ ++ + NPI + R L + + S E +D + S GDIR
Sbjct: 174 TEFDEVGAMHGRDTDHHPSFNPIAPTLMTRALKGMLAKRSQQPSGEFLDTLVATSNGDIR 233
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
AI +LQF+S+ P + K+D R++ L LFH LGK L+
Sbjct: 234 SAIMALQFASVATKPG------------KKGKSD-RAVLEAITRREQGLVLFHLLGKILY 280
Query: 434 NKRETD 439
NKR+ D
Sbjct: 281 NKRKGD 286
>gi|194900824|ref|XP_001979955.1| GG21143 [Drosophila erecta]
gi|190651658|gb|EDV48913.1| GG21143 [Drosophila erecta]
Length = 536
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 171/375 (45%), Gaps = 46/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W + KF + ++T
Sbjct: 74 DADITGPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRH-CEAVRKKFPAQMCLLT 132
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKTAT+R +A G +L EW P + + +G Y S L+ F++F+ R
Sbjct: 133 GPTGAGKTATLRVLAKEFGYQLQEWINPVDCEVVNALGDQTSGTSYVGSHLEAFKSFLLR 192
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L +S P ++
Sbjct: 193 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEANFEELLDEYTAYGKS---PLVFIV 244
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ------- 353
+ K+ ++ + + F + + ++ N I + +++++ C + Q
Sbjct: 245 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSVKAFCSEMQQPQNKAT 301
Query: 354 YSL-STEQIDLVAQASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPNFPEEKADGHGG 411
Y + ST +D + + GDIR A+ +L SSLK P M L++S +K
Sbjct: 302 YKVPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVPSMPTKQLNVSVATKGRKKKMQSTL 361
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
SI GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 362 KSI--GRDESITLMHALGRVLNPKFNEDKTM-------------------LHSPEEITEA 400
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F+H N
Sbjct: 401 FNSEPRNFVNFIHAN 415
>gi|403267804|ref|XP_003925997.1| PREDICTED: cell cycle checkpoint protein RAD17 [Saimiri boliviensis
boliviensis]
Length = 620
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 207/485 (42%), Gaps = 76/485 (15%)
Query: 53 PDVQKKNVEHFLTPSRFEGLV-------NPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQ 105
P V V ++ PS F+ L+ N L + +SS ++ KN P +LE
Sbjct: 8 PKVSSTKVTDWVDPS-FDDLLECRDISTNTATSLGVNNSSHRR----KNGPSALESSIFP 62
Query: 106 KENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF 165
G + + GL N + S + W +KYKP + ELAV +KK+EEV W
Sbjct: 63 ARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWL 117
Query: 166 EERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQ----EYM 221
+ ++ + + K ++L++TG G GKT T++ ++ LG ++ EW P +Q + M
Sbjct: 118 KAQVLERQPKQGGSILLVTGPPGCGKTTTIKILSKELGIQVQEWINPVLPDFQKDNFKEM 177
Query: 222 HNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAF 278
N ++ Y S++ F+ F+ R +Y I+L++DLP R +
Sbjct: 178 FNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMFGDDLRTDKKIILVEDLPNQFYRDS- 236
Query: 279 ERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITN 338
L + L V+ P ++++ D+ Q + I + ++ NP+
Sbjct: 237 HTLHEVLRKYVKIGRCPLIFIISDSLSGDN----NQRLLFPKEIEEECSISNISFNPVAP 292
Query: 339 GSIKRTLSKICRQEQ-----YSLSTEQIDLVAQASGGDIRQAITSL-------------Q 380
+ + L++I E + ++ Q D+ + + G +I L +
Sbjct: 293 TIMMKFLNRIVTIEANKYVIFFYTSNQGDVKKKKTDGPSAPSIMVLGNPTGENNLRPRKK 352
Query: 381 FSSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRET 438
SLK D +L+ S KP+ F ++ G G+D +L LF ALGK L+ KR +
Sbjct: 353 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVSLFLFRALGKILYCKRTS 406
Query: 439 DNLVKMDQDAFVVKDKFSRLPLKMD---------APEKVLSQAHGQARPVLDFLHENCWL 489
L ++D SRLP + PE+V+ +H +LH+N ++
Sbjct: 407 --LTELDS---------SRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQN-YM 454
Query: 490 DIMRQ 494
D +
Sbjct: 455 DFFME 459
>gi|390595268|gb|EIN04674.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 598
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 72/361 (19%)
Query: 143 YKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFST--NVLVITGQAGVGKTATVRQIA 199
Y P+++E+LAV +KKVE+VR W E L G + +L +TG AG GKTA +R IA
Sbjct: 2 YAPKTVEDLAVHKKKVEDVRHWLMEALDGGPSGRLRKYRRILALTGPAGTGKTAVLRLIA 61
Query: 200 SHLGARLYEWDTPT--PTIW---QEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
LG + EW W Q+Y + + S D+F +F+ R YG+
Sbjct: 62 DELGVEILEWRNSVIDGARWREDQDYGNVDRWTDHGESLTDKFSSFLARAGTYGAIFSEL 121
Query: 250 --TSPSIPGESKSSA---------------ILLIDDLPVTNGRTAFERLRQCLLLLVRST 292
+ S PG S+ ++L++DLP + E + L VRS
Sbjct: 122 QPSKLSTPGSQASNTQVSASGLATAQKRRQVILLEDLPNVLHQGTQEAIHGALRTFVRSE 181
Query: 293 ---HIPTAVVLTECG-KADSVDSTAQ------------SFEELQSILVD-----AGARKV 331
P V++++ G + + VD T Q S +++++L ++
Sbjct: 182 AQLRTPMVVIVSDAGVRGEDVDDTGQGESGGYWRSRSHSTLDVRTVLPSDLLNGPYVTQI 241
Query: 332 ALNPIT----NGSIKRTLSKICRQEQYS--LSTEQIDLVAQASGGDIRQAITSLQFSSLK 385
A NPI +++ L C + + +S + +DL+ Q + GDIR A+ +L+F+
Sbjct: 242 AFNPIAPTLLKKALQALLGAACAHNKAAGRVSKDVLDLIVQTTNGDIRSAVMALEFACTA 301
Query: 386 QDPMLNLSLSISKPNFPEEKADGHGGFSIQFG-------RDETLSLFHALGKFLHNKRET 438
+ IS+ +++ GH + Q G R+ +L+LFH LGK +NKR+
Sbjct: 302 E--------VISETTSAKKRRRGHNKHTDQRGVFEAVTRRESSLALFHLLGKVFYNKRKG 353
Query: 439 D 439
D
Sbjct: 354 D 354
>gi|310793942|gb|EFQ29403.1| Rad17 cell cycle checkpoint protein [Glomerella graminicola M1.001]
Length = 877
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 152/347 (43%), Gaps = 67/347 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P +LEELAV ++KV +VR W E+ +G +L++ G AG GKT +R +
Sbjct: 207 WSERFGPLNLEELAVHKRKVADVRKWLEDVVGGRL---RQRLLLLKGAAGSGKTTAMRLL 263
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A +G L EW PT T+ L YTS +F+ F+ R ++G +P E+
Sbjct: 264 AKDMGYELLEWRNPTNTLGAH--------LGYTSASAQFQEFLSRGGKFGQLDTDVPTEA 315
Query: 259 KSSA---------ILLIDDLPVTNGR--TAFERLRQCLLLLV------------RSTHIP 295
A I+LI++ P T R TA R LL + RS P
Sbjct: 316 PRPANEKSASAGKIILIEEFPNTFSRSSTALSSFRSTLLEYLAANTPSLTTFGRRSPSEP 375
Query: 296 -TAVVL--------TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLS 346
T VVL T ADS TA + IL G R + N I + + L
Sbjct: 376 ITPVVLIVSETLLTTTSASADSF--TAHRLLGPE-ILRHPGTRVIEFNTIAPTLLAKALE 432
Query: 347 KICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLK--QDPMLNLSLSISKPN 400
+ +E ++ L GDIR AI+SL+F LK QD +++SK
Sbjct: 433 LVVLKEARKSGRKRTPGPQVLKRLGEIGDIRSAISSLEFMCLKGDQDADWGAKVALSK-- 490
Query: 401 FPEEKADGHGGFSIQFGRDETLSL----------FHALGKFLHNKRE 437
+ G S+ G ETL L FHA+GK ++NKR+
Sbjct: 491 ---QSKGAKAGISLTKGEKETLELISQREASLGIFHAVGKVVYNKRD 534
>gi|195501540|ref|XP_002097839.1| GE26434 [Drosophila yakuba]
gi|194183940|gb|EDW97551.1| GE26434 [Drosophila yakuba]
Length = 537
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 46/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W + KF + ++T
Sbjct: 75 DADITGPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRH-CEAMRKKFPAQMCLLT 133
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKTAT+R +A G +L EW P + + +G Y S L+ F++F+ R
Sbjct: 134 GPTGAGKTATLRVLAKEFGYQLQEWINPVDCEVINALGDQNSGTSYVGSHLEAFKSFLLR 193
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L +S P ++
Sbjct: 194 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEANFEELLNEYTAYGKS---PLVFIV 245
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ------- 353
+ K+ ++ + + F + + ++ N I + +++++ C Q
Sbjct: 246 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSIKTFCSVMQQPQNKAT 302
Query: 354 YSL-STEQIDLVAQASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPNFPEEKADGHGG 411
Y + ST +D + + GDIR A+ +L SSLK P M L++S +K
Sbjct: 303 YKVPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVPSMPTKQLNVSVAAKGRKKKMQSTL 362
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
SI GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 363 KSI--GRDESITLMHALGRVLNPKFNEDKTM-------------------LHSPEEITEA 401
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F+H N
Sbjct: 402 FNTEPRNFVNFIHAN 416
>gi|66801473|ref|XP_629662.1| hypothetical protein DDB_G0292504 [Dictyostelium discoideum AX4]
gi|60463035|gb|EAL61231.1| hypothetical protein DDB_G0292504 [Dictyostelium discoideum AX4]
Length = 1191
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 187/406 (46%), Gaps = 70/406 (17%)
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN------ 179
+D++ ++ +++ +K+ PRS +L V +K+++ V+ W + R + STN
Sbjct: 528 NDNSENIDNSDKMFVDKHFPRSESDLVVHKKRIDMVKIWLQSRFKE----LSTNQPIEQK 583
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
+L +TG GVGK++ +R ++ + + EW P+ + ++ + T Y+S L+EF+
Sbjct: 584 LLFLTGPTGVGKSSLIRVLSKSMEFDIEEWINPSIVLTRDMNDSLST--PYSSTLEEFKK 641
Query: 240 FVERIRRYGSTSPSI--PGESKSSAILLIDDLP--VTNGRTAFERLRQCLLLLVRSTHIP 295
++ ++ SI G + + IL +++ P + R F + L S+ P
Sbjct: 642 WL----KFNGQGFSIFGNGNNNNKKILFVEEFPNVTLDNRIDFVETFENFL---HSSRYP 694
Query: 296 TAVVLTECGKADSVDSTAQSFEELQSILVDAGAR--KVALNPITNGSIKRTLSKICRQEQ 353
+L +D+ + ++ S ++ + + NPI + +TL KI E
Sbjct: 695 LIFIL-----SDTFSGNSSLYQLFPSSFLNNNPQILHINFNPIAPTQLLKTLEKITYLEG 749
Query: 354 Y--SLSTEQIDLVAQASGGDIRQAITSLQFSSL-KQDPMLNLSLSISKPNFPEEKADGHG 410
Y S+S+ Q+ +A S GDIR AI SL+F + K ++N S +I K +++ G
Sbjct: 750 YSHSISSVQLKSIADESAGDIRAAIHSLEFYCVGKNHKLINKSTTIPK----KKRNSGGS 805
Query: 411 GFS-----------------------------IQFGRDETLSLFHALGKFLHNKRETD-N 440
G + I RD ++LFH++GK L+NKR +D N
Sbjct: 806 GVNKKQKDEIEDIGNDSNLNINGGGGSGSSRGITRNRDSIITLFHSVGKILYNKRISDSN 865
Query: 441 LVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
K + + K K+ R L + E+V +H L F+HEN
Sbjct: 866 PYKPESTWY--KQKYHR-QLPENVVEEVFENSHMDFNTFLHFIHEN 908
>gi|47214987|emb|CAG01321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1657
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 172/398 (43%), Gaps = 63/398 (15%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W ++Y P ELAV +KK EEV W SK VL++TG +G GKTATVR +
Sbjct: 6 WVDRYSPSCQAELAVHKKKTEEVETWLRAHTATSKG----GVLLLTGPSGCGKTATVRVL 61
Query: 199 ASHLGARLYEWDTPT-------------PTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
+ L R+ EW + P E+ N L +S+ +F++F+ R
Sbjct: 62 SRELNIRIQEWTNYSNLESYSSSQYVIVPLCLSEFRMN---DLSCSSQSAQFKDFLLRAN 118
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+Y ES ++L++D P R L L V+S+ P +++
Sbjct: 119 KYNWLKIVGDDESTDKKLILVEDFPNQFYRQPGS-LHDILRQFVKSSRCPLVFIVS---- 173
Query: 306 ADSV--DSTAQSF--EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS------ 355
DSV D +A+S ++LQ L ++ NP+ ++ + L++I E
Sbjct: 174 -DSVTGDCSARSLFPKDLQEEL---SITSISFNPVAPTALMKVLTRISTVEAGKSCGKMR 229
Query: 356 -LSTEQIDLVAQASGGDIRQAITSLQFSS---------------LKQDPMLNLSLSISKP 399
L ++ + GD+R AI SLQF S LK+D ++ +K
Sbjct: 230 VLDAAALESLCSGCSGDVRSAINSLQFMSFPGGASSQQTCAGSYLKKDGPVSSGTRPTKK 289
Query: 400 NFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK-----DK 454
P++ +G +I G+D TL LF ALGK LH KR + + Q A
Sbjct: 290 TRPKKVNQPNGEAAI-GGKDATLFLFRALGKILHCKRGSPEGPEAGQCAPEAALPSHLAH 348
Query: 455 FSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIM 492
R PL + +PE V+ +H +LH+N +LD
Sbjct: 349 HHRDPL-LVSPEMVVEHSHMSGEVFNLYLHQN-YLDFF 384
>gi|260793698|ref|XP_002591848.1| hypothetical protein BRAFLDRAFT_59930 [Branchiostoma floridae]
gi|229277059|gb|EEN47859.1| hypothetical protein BRAFLDRAFT_59930 [Branchiostoma floridae]
Length = 577
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 173/379 (45%), Gaps = 54/379 (14%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEER--LGDSKDKFSTNVLVITGQAGVGKTATV 195
LW E ++P S+ +LAV KKV +V+ W + +G KD T +L++TG G GKTATV
Sbjct: 51 LWVEVHQPTSVADLAVHPKKVAQVQDWVKSHVLMGPVKD---TPILLLTGPPGAGKTATV 107
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHN--CKTGLEYTSKLDEFENFVERIRRYGSTSPS 253
+ +A G + EW P + Q + G + F++F+ R ++ S
Sbjct: 108 KLLAQQEGVEVQEWVNPVTEVHQLSTDDPAASRGSRQVPQAAVFKDFLLRASQFSSL--C 165
Query: 254 IPGESKSS-AILLIDDLPVTNGRTAFERLRQCLLLLVRSTH----IPTAVVLTEC-GKAD 307
+ G +KS ++L++D P F R R ++R P +++E GK
Sbjct: 166 LTGAAKSDLKLVLVEDFP-----NVFYRDRAQFHDVLRHVREVGCFPVVFIVSETSGKDS 220
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST------EQI 361
V +LQ + VD ++ N + +++R LS + +E S+ ++I
Sbjct: 221 RVRDLFPPDLQLQ-LKVDV----ISFNAVAATNMQRALSSVLNKEAARRSSFKRPEKDRI 275
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPM--------------LNLSLSISKPNFPEEKAD 407
V Q S GDIR AI LQFSSL+ PM N S S KP + A+
Sbjct: 276 QEVVQVSAGDIRSAINLLQFSSLRV-PMDRTSKVLKKTSSGKGNASKSKRKPVKEKASAE 334
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEK 467
+G G+D +L LF ALGK L+ KR + + + D+ RLP+ + PE
Sbjct: 335 QNG------GKDISLFLFRALGKILYCKRSEEEERGLPPLPPHLSDQ-KRLPM-LAEPEA 386
Query: 468 VLSQAHGQARPVLDFLHEN 486
V+ A + FL +N
Sbjct: 387 VVHACPLSAEALCLFLQQN 405
>gi|195328945|ref|XP_002031172.1| GM25836 [Drosophila sechellia]
gi|194120115|gb|EDW42158.1| GM25836 [Drosophila sechellia]
Length = 535
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 170/375 (45%), Gaps = 48/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W + KF + ++T
Sbjct: 75 DADITGPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRH-CEAVRKKFPAQMCLLT 133
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKTAT+R +A G +L EW P + + TG Y S L+ F++F+ R
Sbjct: 134 GPTGAGKTATLRVLAKEFGYQLQEWINPIDCEVVNALGDQTTGASYVGSHLEAFKSFLLR 193
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L + +S P ++
Sbjct: 194 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEVNFEELLEEYTAYGKS---PLVFIV 245
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-----YS 355
+ K+ ++ + + F + + ++ N I + +++++ C Q Y
Sbjct: 246 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSMKTFCSVMQQNKATYK 302
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLK---QDPMLNLSLSISKPNFPEEKADGHGG 411
+ ST +D + + GDIR A+ +L SSLK P L++S+S + +
Sbjct: 303 VPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVSSMPTKQLNVSVSA----KGRKKKMQS 358
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 359 TLKSIGRDESITLMHALGRVLNPKFNEDKTM-------------------LHSPEEITEA 399
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F++ N
Sbjct: 400 FNTEPRNFVNFVYAN 414
>gi|346978189|gb|EGY21641.1| cell cycle checkpoint protein RAD17 [Verticillium dahliae VdLs.17]
Length = 890
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 156/345 (45%), Gaps = 62/345 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P SL+ELAV +KKV +VR W E+ L + VL++ G AG GKT T+R +
Sbjct: 206 WSERFGPVSLDELAVHKKKVVDVRRWLEDVLA---GRLRQRVLLLKGAAGAGKTTTMRLL 262
Query: 199 ASHLGARLYEWDTPT-PTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY---------- 247
A LG L EW PT PT GL + S +F+ F+ R ++
Sbjct: 263 ARELGCELLEWRNPTGPT---------SGGLGFQSASAQFQEFLGRGGKFGQLEMDGGAG 313
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLV---------------R 290
GS S + + + I+L+++ P T R TA R LL +
Sbjct: 314 GSDSSTQALDKGTRRIILVEEFPNTFARSSTALTSFRNALLAYLAANTPSLSAFGRPSQN 373
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTLS 346
+T P +V++E + ++A SF + IL G + N I + + L
Sbjct: 374 ATITPVVMVISET-LLTTTSASADSFTAHRLLGPEILRHPGVGVIEFNAIAPSILAKALE 432
Query: 347 KICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFP 402
+ +E + ++ LV + G GDIR AI+SL+F LK D + ++ F
Sbjct: 433 LVVTKEARTSGRKRTPGPLVLKRLGEIGDIRSAISSLEFLCLKGDQEADWGAKVA---FT 489
Query: 403 EEKADGHGGFSIQFGRDETLSL----------FHALGKFLHNKRE 437
+ K ++ G +E+L L FHA+GK ++NKR+
Sbjct: 490 KAKRGSKELLAMTKGEEESLELISQREASLGIFHAVGKVVYNKRD 534
>gi|402219539|gb|EJT99612.1| Rad17-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 647
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 168/368 (45%), Gaps = 55/368 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL---GDSKDKFSTNVLVITGQAGVGKTA 193
Q+W ++Y P S E LAV ++K++EVR W +E + K K +L +TG AG GKTA
Sbjct: 89 QMWVDRYAPTSSENLAVHKRKIDEVRHWLDEAITGGPTGKLKRYRRLLALTGPAGAGKTA 148
Query: 194 TVRQIASHLGARLYEW--DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T++ +A LG ++ EW D+ P + + + S FE ++ S
Sbjct: 149 TIQVLAKELGIQITEWRNDSDVP------LFQPLSHESFESSSFRFETYLSHTHSVLPWS 202
Query: 252 PSIPGESKSSA--ILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
P P + +SA +LL++DLP + R AF+ Q L+ T P ++++E G +
Sbjct: 203 PPNPSTAGTSAARLLLLEDLPNVLHADTRQAFQSYIQG--LVESGTGPPIVLIVSESG-S 259
Query: 307 DSVDSTAQSFEELQSILVDAGAR--------KVALNPITNGSIKRTLSKICRQEQYS--- 355
++ + EE I G R ++ N + + LS+I Q +
Sbjct: 260 RAMGADTWRREEKWDIRNILGPRLMNSPYMMEIQFNAVAPTIMHTALSRILSQTHPTPAS 319
Query: 356 --LSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFS 413
S E +D++ + S GDIR AI++LQF+ L ++ + + + G
Sbjct: 320 LRPSPETLDIIVEGSNGDIRSAISALQFAC-----RLQMAEGVKGGGSGKRRRGKKGKPG 374
Query: 414 IQFGR--------DETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKD----------KF 455
+ R ++ L+LFH +GK L+NKR D K +Q +++ +F
Sbjct: 375 DEVRRIIEGLTRNEQILALFHIIGKILYNKRYGDPEEKEEQHPKALEEHALPLPPHLHEF 434
Query: 456 SRLPLKMD 463
R P K+D
Sbjct: 435 RRRPSKVD 442
>gi|451849981|gb|EMD63284.1| hypothetical protein COCSADRAFT_38147 [Cochliobolus sativus ND90Pr]
Length = 879
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 59/343 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EK+ P SL+ELAV +KKV +VR W + LG K +L++ G AG GKT T+ +
Sbjct: 198 WTEKFGPVSLDELAVHKKKVADVRTWLTDVLGGKSRK---RLLLLKGPAGSGKTTTMALL 254
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS--PSIPG 256
+ L ++EW PT + T S +FE+FV R +GS + +P
Sbjct: 255 SKELDIDMHEWKNPTGAM--------STSDSLVSITAQFEDFVARTGTFGSLTFDTQVPA 306
Query: 257 ESKSSA---------ILLIDDLPVTNGRT--AFERLRQCLL-LLVRSTHIPTAVVLTECG 304
+S ++L+++ P T RT A + R +L L +T TA ++
Sbjct: 307 AQTASPTTQTGRKQQLVLVEEFPNTFTRTSSAVQSFRSSVLKYLAANTQSATAFYSSQVD 366
Query: 305 KADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTL 345
A +V + A SF + IL G V NPI + + L
Sbjct: 367 PAHAVTPIVMIISETLLSTNTAAADSFTAHRLLGPEILTHPGVSVVEFNPIAPTYMTKAL 426
Query: 346 SKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD------PMLNLS 393
I +E + +LS + I +A+ GDIR AI+SL+F L+ D +N +
Sbjct: 427 DTIILKEARRSGRKKTLSPQAIQRLAEL--GDIRSAISSLEFLCLRGDDAEGWGAKVNFT 484
Query: 394 LSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ + P K + + R+ TL +FH++GK ++NKR
Sbjct: 485 KKKTAKDTPMTKTE-QDSLEMVTQRESTLGIFHSVGKVIYNKR 526
>gi|355715039|gb|AES05204.1| RAD17-like protein [Mustela putorius furo]
Length = 704
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 171/391 (43%), Gaps = 55/391 (14%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
S + W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT
Sbjct: 106 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAKVLERQPKQGGSILLITGPPGCGKTT 165
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRR 246
T++ ++ G ++ EW P +Q + + N ++ Y S++ F+ F+ R +
Sbjct: 166 TLKILSKEHGIQVQEWINPILPDFQKDDFKEILNPESSFHVFPYQSQIAVFKEFLLRATK 225
Query: 247 YGSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
Y I+LID DLP R + L + L V + P ++++
Sbjct: 226 YNKLQMLGDDLRTDKRIILIDIEDLPNQFYRDS-HTLHEILRKYVHTGRCPLIFIISDSL 284
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-------LS 357
D+ Q + I + ++ NP+ + + L++I E
Sbjct: 285 SGDN----NQRLLFPKEIQEECAIANISFNPVAPTIMMKFLNRIVTVEANKNGGNITVPD 340
Query: 358 TEQIDLVAQASGGDIRQAITSLQFSSLKQDPML------------NLSLSISKPNFPEEK 405
++L+ Q GDIR AI SLQFSS K + L + +LS SK ++
Sbjct: 341 RRSLELLCQGCSGDIRSAINSLQFSSSKGENRLWPRKKALSSIKSSAALSKSKQRKKTDR 400
Query: 406 ADGHGGFSIQFGRDETLSLFHALGKFLHNKRET----------DNLVKMDQDAFVVKDKF 455
+ G+D +L LF ALGK L+ KR + +L + ++D +V+
Sbjct: 401 VFENQEVQAIGGKDISLFLFRALGKILYCKRASLAEIDSPRLPSHLSEYERDTLLVQ--- 457
Query: 456 SRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
PE+V+ +H +LH+N
Sbjct: 458 ---------PEEVVEMSHMPGELFNLYLHQN 479
>gi|85112300|ref|XP_964321.1| hypothetical protein NCU00517 [Neurospora crassa OR74A]
gi|28926098|gb|EAA35085.1| predicted protein [Neurospora crassa OR74A]
Length = 944
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 162/372 (43%), Gaps = 65/372 (17%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RFL PSR P ++ + W+E++ P +LEELAV ++KV +VR W E+ +
Sbjct: 213 RFLKPSR---PTRPVVAPPPSTDDDSRPWSERFAPTNLEELAVHKRKVGDVRKWLEDVIA 269
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +LV+ G AG GKT T++ +A + + EW P + + G Y
Sbjct: 270 ---GRMRQRLLVLKGAAGTGKTTTLKLLAEDMRCEVLEWRNPASS------YGVPQG--Y 318
Query: 231 TSKLDEFENFVERIRRYG-----------STSPSIPGESKSSAILLIDDLPVTNGR--TA 277
S +FE F+ R R++G + +P+I ++ ++LI++ P T R TA
Sbjct: 319 QSASSQFEEFLGRGRKFGQLDLEGDSPLPALAPTINTSNQGRRVILIEEFPNTFMRSSTA 378
Query: 278 FERLRQCLLLLVRSTHIPTAVVLTECGKADSV---------------DSTAQSFEELQ-- 320
R + + + + P + ADS+ ++A SF +
Sbjct: 379 LTNFRNTIYEFL-AANTPALTPFGQTPPADSIVPIVMVISETLLTTTSASADSFTAHRLL 437
Query: 321 --SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--GDIRQ 374
IL G + NPI + + L + ++E LV + G GDIR
Sbjct: 438 GPEILRHPGTGVIEFNPIAPSLLAKALELVVKKEARRSGRRMTPGPLVLKRLGEIGDIRN 497
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDETLSL 424
AI SL+F +K D + SK F + K G ++ G R+ TL +
Sbjct: 498 AIASLEFLCVKGDDDADWG---SKVAFTKTK-KGSKDAALTKGEQESLELISQREATLGI 553
Query: 425 FHALGKFLHNKR 436
FHA+GK ++NKR
Sbjct: 554 FHAVGKVVYNKR 565
>gi|195454063|ref|XP_002074069.1| GK14447 [Drosophila willistoni]
gi|194170154|gb|EDW85055.1| GK14447 [Drosophila willistoni]
Length = 533
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 163/338 (48%), Gaps = 35/338 (10%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E + P +ELA+ KKVEE+R W + K+ + ++TG +G GKTAT+R +
Sbjct: 91 WMENFAPSQSDELAIHPKKVEELRDWLRH-CEAMRKKYPAQMCLLTGPSGAGKTATLRVL 149
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVERIRRYGSTSPSIPGE 257
A ++ EW P + + G Y S+L+ F++F+ R RY S +
Sbjct: 150 AQEFNYQIQEWINPVDCEVVNALGDQSNGNSYVGSQLEAFKSFLLRASRYKSLL-----D 204
Query: 258 SKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ +LL++D P + +G+T FE L +S P ++ + K+ ++ + +
Sbjct: 205 KQNKRLLLVEDFPNFLLNDGQTIFEELIDEYASYGKS---PLVFIVAD-SKSRGLNISYK 260
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKIC---RQEQ----YSLSTEQ-IDLVAQ 366
F + + ++ N I + +++++ + C +Q+Q Y + T+ +D +
Sbjct: 261 LFTD--QLKAKHRITHISFNSIASTIMQKSMKRFCSLMQQDQNKAIYKVPTQSVVDSIVV 318
Query: 367 ASGGDIRQAITSLQFSSLKQDP-----MLNLSLSISKPNFPEEKADGHGGFSIQFGRDET 421
+ GDIR A+ +L F SLK P L++S+ +SK + KA F GRDE+
Sbjct: 319 GAQGDIRNALINLHFGSLKGVPNIPVKQLDVSV-VSKGR--KRKAQSTLKF---IGRDES 372
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLP 459
++L HALG+ + K D ++ + + FS P
Sbjct: 373 ITLMHALGRVFNPKYNEDREKRLQHSPEEIAEAFSTEP 410
>gi|45550751|ref|NP_650382.3| Rad17 [Drosophila melanogaster]
gi|45446485|gb|AAF55086.2| Rad17 [Drosophila melanogaster]
Length = 535
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 169/375 (45%), Gaps = 48/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W K KF + ++T
Sbjct: 75 DADITVPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRK-KFPAQMCLLT 133
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKT T+R +A G +L EW P + + TG Y S L+ F++F+ R
Sbjct: 134 GPTGAGKTTTLRVLAKEFGYQLQEWINPIDCEVVNTLGDQTTGASYVGSHLEAFKSFLLR 193
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L + +S P ++
Sbjct: 194 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEVNFEELLEEYTAYGKS---PLVFIV 245
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-----YS 355
+ K+ ++ + + F + + ++ N I + +++++ C Q Y
Sbjct: 246 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSMKTFCSVMQQNKATYK 302
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLK---QDPMLNLSLSISKPNFPEEKADGHGG 411
+ ST +D + + GDIR A+ +L SSLK P L++S+S + +
Sbjct: 303 VPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVSSMPTKQLNVSVSA----KGRKKKMQS 358
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 359 TLKSIGRDESITLMHALGRVLNPKFNEDKTM-------------------LHSPEEITEA 399
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F++ N
Sbjct: 400 FNTEPRNFVNFVYAN 414
>gi|219990627|gb|ACL68687.1| FI02832p [Drosophila melanogaster]
Length = 549
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 169/375 (45%), Gaps = 48/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W K KF + ++T
Sbjct: 89 DADITVPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRK-KFPAQMCLLT 147
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKT T+R +A G +L EW P + + TG Y S L+ F++F+ R
Sbjct: 148 GPTGAGKTTTLRVLAKEFGYQLQEWINPIDCEVVNTLGDQTTGASYVGSHLEAFKSFLLR 207
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L + +S P ++
Sbjct: 208 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEVNFEELLEEYTAYGKS---PLVFIV 259
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-----YS 355
+ K+ ++ + + F + + ++ N I + +++++ C Q Y
Sbjct: 260 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSMKTFCSVMQQNKATYK 316
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLK---QDPMLNLSLSISKPNFPEEKADGHGG 411
+ ST +D + + GDIR A+ +L SSLK P L++S+S + +
Sbjct: 317 VPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVSSMPTKQLNVSVSA----KGRKKKMQS 372
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 373 TLKSIGRDESITLMHALGRVLNPKFNEDKTM-------------------LHSPEEITEA 413
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F++ N
Sbjct: 414 FNTEPRNFVNFVYAN 428
>gi|195113393|ref|XP_002001252.1| GI22078 [Drosophila mojavensis]
gi|193917846|gb|EDW16713.1| GI22078 [Drosophila mojavensis]
Length = 493
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 154/335 (45%), Gaps = 41/335 (12%)
Query: 122 VNPDHDSA--SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN 179
VN D+D +A+ + W + + P + E+LAV KK+ +VR W + + K+
Sbjct: 38 VNEDNDGEVNAATPDVSENWMDCFAPSTSEDLAVHPKKIGDVRNWLQH-CEAMRKKYPAQ 96
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN-CKTGLEYTSKLDEFE 238
+ ++TG AG GKTAT+R +A +G L EW PT + + G S+L F+
Sbjct: 97 ICLLTGPAGCGKTATLRVLAQEMGYELQEWINPTDCEEINALGDQPNEGTYMGSQLQAFK 156
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAV 298
+F+ R RY S + + +LL++D P CLL +T
Sbjct: 157 SFLLRASRYKSLL-----STGNKRLLLVEDFP------------NCLLKDAAATFEDLMD 199
Query: 299 VLTECGKADSV----DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTL--------S 346
GK+ V DS ++ + D K+ + I+ SI T+ +
Sbjct: 200 EYANYGKSPLVFIVADSKSRMLNISYKLFTDQLKAKLRIEHISFNSIAATIMQKSMKRFA 259
Query: 347 KICRQEQ----YSLSTEQI-DLVAQASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPN 400
+ +Q Q Y L T+ + D + + GDIR A+ +L F SLK P M L+IS P+
Sbjct: 260 SLMQQPQHKSLYKLPTQTVLDSIVVCAQGDIRNALINLHFGSLKGAPGMETKQLNISVPS 319
Query: 401 FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK 435
++ + SI GRDE++++ HALG+ + K
Sbjct: 320 KGRKRKATNTLKSI--GRDESITMMHALGRVFNPK 352
>gi|4883874|gb|AAD31692.1|AF124503_1 DNA repair protein Rad17 [Drosophila melanogaster]
gi|4019207|gb|AAC95521.1| Rad17-like protein [Drosophila melanogaster]
Length = 520
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 169/375 (45%), Gaps = 48/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W K KF + ++T
Sbjct: 60 DADITVPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRK-KFPAQMCLLT 118
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKT T+R +A G +L EW P + + TG Y S L+ F++F+ R
Sbjct: 119 GPTGAGKTTTLRVLAKEFGYQLQEWINPIDCEVVNTLGDQTTGASYVGSHLEAFKSFLLR 178
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L + +S P ++
Sbjct: 179 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEVNFEELLEEYTAYGKS---PLVFIV 230
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-----YS 355
+ K+ ++ + + F + + ++ N I + +++++ C Q Y
Sbjct: 231 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSMKTFCSVMQQNKATYK 287
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLK---QDPMLNLSLSISKPNFPEEKADGHGG 411
+ ST +D + + GDIR A+ +L SSLK P L++S+S + +
Sbjct: 288 VPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVSSMPTKQLNVSVSA----KGRKKKMQS 343
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 344 TLKSIGRDESITLMHALGRVLNPKFNEDKTM-------------------LHSPEEITEA 384
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F++ N
Sbjct: 385 FNTEPRNFVNFVYAN 399
>gi|302411282|ref|XP_003003474.1| cell cycle checkpoint protein RAD17 [Verticillium albo-atrum
VaMs.102]
gi|261357379|gb|EEY19807.1| cell cycle checkpoint protein RAD17 [Verticillium albo-atrum
VaMs.102]
Length = 877
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 155/345 (44%), Gaps = 62/345 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P SL+ELAV +KKV +VR W E+ L + VL++ G AG GKT T+R +
Sbjct: 215 WSERFAPVSLDELAVHKKKVVDVRRWLEDVLA---GRLRQRVLLLKGAAGAGKTTTMRLL 271
Query: 199 ASHLGARLYEWDTPT-PTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY---------- 247
A LG L EW PT PT GL + S +F+ F+ R ++
Sbjct: 272 ARELGCELLEWRNPTGPT---------SGGLGFQSASAQFQEFLGRGGKFGQLEMDGGTG 322
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLV---------------R 290
GS S + + + I+L+++ P T R TA R LL +
Sbjct: 323 GSESSTQALDKGARRIILVEEFPNTFARSSTALTSFRNALLAYLAANTPSLSAFGRPSQN 382
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTLS 346
+T P +V++E + ++A SF + IL G + N I + + L
Sbjct: 383 ATITPVVMVISET-LLTTTSASADSFTAHRLLGPEILRHPGVGVIEFNAIAPSILAKALE 441
Query: 347 KICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFP 402
+ +E ++ LV + G GDIR AI+SL+F LK D + ++ F
Sbjct: 442 LVVIKEARKSGRKRTPGPLVLKRLGEIGDIRSAISSLEFLCLKGDQEADWGAKVA---FT 498
Query: 403 EEKADGHGGFSIQFGRDETLSL----------FHALGKFLHNKRE 437
+ K ++ G +E+L L FHA+GK ++NKR+
Sbjct: 499 KAKRGSKELLAMTKGEEESLELISQREASLGIFHAVGKVVYNKRD 543
>gi|302922770|ref|XP_003053535.1| hypothetical protein NECHADRAFT_74780 [Nectria haematococca mpVI
77-13-4]
gi|256734476|gb|EEU47822.1| hypothetical protein NECHADRAFT_74780 [Nectria haematococca mpVI
77-13-4]
Length = 854
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 162/373 (43%), Gaps = 71/373 (19%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
+FL P + E D D + W++++ P++L+ELAV +KKV +VR W E+ +
Sbjct: 176 KFLKPPKPERPAAADED--------LRPWSDRFGPKNLDELAVHKKKVSDVRRWLEDVMA 227
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +L++ G AG GKT T+R +A+ +G L EW PT +GL +
Sbjct: 228 ---GRMRQRLLILKGAAGSGKTTTMRLLANDMGCELLEWRNPT----------GSSGLGF 274
Query: 231 TSKLDEFENFVERIRRYGS---------TSPSIPGESK--SSAILLIDDLPVTNGR--TA 277
S +FE F+ R ++G+ T S G K S I+LI++ P T R TA
Sbjct: 275 VSTSAQFEEFLGRGGKFGALDTDMVGPPTQNSFHGTHKKDSKRIILIEEFPNTFSRASTA 334
Query: 278 FERLRQCLLLLVRSTHIPTAVVLTECGKADSV---------------DSTAQSFEELQ-- 320
R +L + + + P+ + + + V ++A SF +
Sbjct: 335 LTSFRNTILRYL-ADNTPSLSTFAKPSRQEPVAPMVMIISETLLTTTSASADSFTAHRLL 393
Query: 321 --SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQ 374
IL G + N I +++ L I ++E + L GDIR
Sbjct: 394 GPEILRHPGVGMIEFNAIAPTLLQKALELIVQKEARKSGRRKTPGPQVLKRLGEIGDIRS 453
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDETLSL 424
A +SL+F LK D + ++ F ++K + G R+ +L +
Sbjct: 454 AASSLEFLCLKGDQQADWGGKVA---FTKQKKGVKDAIKLTHGEQESLELISRREASLGI 510
Query: 425 FHALGKFLHNKRE 437
FHA+GK ++NKR+
Sbjct: 511 FHAVGKVVYNKRD 523
>gi|169602593|ref|XP_001794718.1| hypothetical protein SNOG_04300 [Phaeosphaeria nodorum SN15]
gi|111066940|gb|EAT88060.1| hypothetical protein SNOG_04300 [Phaeosphaeria nodorum SN15]
Length = 852
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 153/347 (44%), Gaps = 67/347 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY P SLEELAV +KKV +VR W E+ K +L++ G AG GKT T+ +
Sbjct: 195 WTEKYGPASLEELAVHKKKVSDVRTWLEDVFSGRGRK---RLLLLKGPAGSGKTTTMSLL 251
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLE-YTSKLDEFENFVERIRRYGS-------- 249
A LG ++EW PT +I G E + S +F++FV R +GS
Sbjct: 252 AKELGIDMHEWKNPTSSI---------AGPEGFMSATAQFDDFVGRAGAFGSLVFDEPSR 302
Query: 250 --TSPSIPGE-SKSSAILLIDDLPVTNGR--TAFERLRQCLL-LLVRSTHIPTAVVLTEC 303
P+ G S+ ++L+++ P T R +A + R +L L +T TA
Sbjct: 303 NVAPPAASGSGSRQKQLVLVEEFPNTFARASSAVQSFRSSVLNYLAANTMSATAFF---S 359
Query: 304 GKADSVDS------------------TAQSFEELQ----SILVDAGARKVALNPITNGSI 341
G+ D V S A SF + IL G + NPI +
Sbjct: 360 GQVDPVQSVTPIVMIISETLLSTNTAAADSFTAHRLLGPEILTHPGVSVIDFNPIAATFM 419
Query: 342 KRTLSKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD------PM 389
+ L + +E + ++ + I +A+ GDIR A +SL+F L+ D
Sbjct: 420 TKALDLMVIKEARKSGRRMTVGPQVIQQLAEL--GDIRSAASSLEFLCLRGDDAEGWGAK 477
Query: 390 LNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+N + + P K + + R+ TL +FHA+G+ ++NKR
Sbjct: 478 VNFAKKKGPKDVPITKME-RESLELVTQRESTLGIFHAVGRVVYNKR 523
>gi|322708742|gb|EFZ00319.1| cell cycle checkpoint protein RAD17 [Metarhizium anisopliae ARSEF
23]
Length = 860
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 160/386 (41%), Gaps = 79/386 (20%)
Query: 103 AIQKENVGR-FLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEV 161
A + N G FL P R V D D + W+E++ PR+L+ELAV +KKV +V
Sbjct: 168 ASESSNTGSMFLKPPRPANPVGVDDD--------LRPWSERFGPRNLDELAVHKKKVADV 219
Query: 162 RAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYM 221
R W E+ + + +L++ G AG GKT TVR +A+ +G L EW PT
Sbjct: 220 RRWLEDVM---SGRMRQRILILKGAAGSGKTTTVRLLATDMGCELLEWKNPT-------- 268
Query: 222 HNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP-----------GESKSSAILLIDDLP 270
+G Y S +F F+ R ++G+ P +S++ I+L+++ P
Sbjct: 269 --TNSGTGYVSVSGQFGEFLGRSGKFGTLDVEEPANTTMKNSNGLAQSRAKRIILVEEFP 326
Query: 271 VTNGR--TAFERLRQCLLLLVRSTHIPTAVVLTECGKAD--------------------- 307
T R +A R +L + + H P+ L GKA
Sbjct: 327 NTFSRSSSALTSFRSTILQYL-AAHTPS---LASFGKAPQHRNQISPIVLVISETLLTTT 382
Query: 308 --SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID--- 362
+ DS IL G + N I + + L + +E ++
Sbjct: 383 SATADSLTAHRLLGPEILRHPGVGVIEFNAIAPSILAKALELVVLKEARKSGRKRTPGPQ 442
Query: 363 -LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG---- 417
L GDIR A++SL+F LK D + ++ F + K ++ G
Sbjct: 443 VLKRLGEIGDIRNAVSSLEFLCLKGDQDSDWGAKVA---FTKIKKSTRDSITLTKGEAES 499
Query: 418 ------RDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+GK ++NKR+
Sbjct: 500 LELISQREASLGIFHAVGKIVYNKRD 525
>gi|171684761|ref|XP_001907322.1| hypothetical protein [Podospora anserina S mat+]
gi|170942341|emb|CAP67993.1| unnamed protein product [Podospora anserina S mat+]
Length = 968
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 62/346 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+EKY P +LEELAV +KKV +VR W E+ G + +L++ G AG GKT T+R +
Sbjct: 268 WSEKYGPVNLEELAVHKKKVADVRRWLEDVYG---GRLRQRLLILKGAAGTGKTTTLRLL 324
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS--------- 249
A L + EW P+ + G Y S +FE F+ R ++G
Sbjct: 325 AKDLKCEVLEWRNPSNSF-------GAVGQAYQSAASQFEEFLGRGGKFGQLDFEEDEEQ 377
Query: 250 ----TSPSIPGESKS-SAILLIDDLPVTNGRTA--FERLRQCLLLLVRSTH--------- 293
P +P ++ S ++LI++ P T R++ R ++ + +
Sbjct: 378 EPEMAPPHLPAQNGSDKKLILIEEFPNTFMRSSAGLVSFRNAIIQYLAANMPAMVGWGRA 437
Query: 294 ------IPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPITNGSIKR 343
P +V++E + ++A SF + +L G V NP+ + +
Sbjct: 438 SSSGPITPIVMVISET-LLTTASASADSFTAHRLLGPEVLRHPGTAIVEFNPVAPTLLAK 496
Query: 344 TLSKICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQFSSLKQD---------PML 390
L I ++E + LV Q G GDIR A++SL+F +K D +
Sbjct: 497 ALEVIVQKEARKSGRRRTPGPLVLQRLGEIGDIRSAVSSLEFLCVKGDDDTDWGSQVALA 556
Query: 391 NLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
S S P + + D + R+ TL +FHA+GK ++NKR
Sbjct: 557 KTKKSKSVPTLTKGEKD---SLELVSQREATLGIFHAVGKVVYNKR 599
>gi|195570858|ref|XP_002103421.1| GD20407 [Drosophila simulans]
gi|194199348|gb|EDX12924.1| GD20407 [Drosophila simulans]
Length = 535
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 169/375 (45%), Gaps = 48/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W K KF + ++T
Sbjct: 75 DADITGPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRK-KFPAQMCLLT 133
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKTAT+R +A G +L EW P + + G + S L+ F++F+ R
Sbjct: 134 GPTGAGKTATLRVLAKEFGYQLQEWINPIDCEVVNALGDQTAGASFVGSHLEAFKSFLLR 193
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L + +S P ++
Sbjct: 194 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEVNFEELLEEYTAYGKS---PLVFIV 245
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-----YS 355
+ K+ ++ + + F + + ++ N I + +++++ C Q Y
Sbjct: 246 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSMKTFCSVMQQNKATYK 302
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLK---QDPMLNLSLSISKPNFPEEKADGHGG 411
+ ST +D + + GDIR A+ +L SSLK P L++S+S + +
Sbjct: 303 VPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVSSMPTKQLNVSVSA----KGRKKKMQS 358
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 359 TLKSIGRDESITLMHALGRVLNPKFNEDTTM-------------------LHSPEEITEA 399
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F++ N
Sbjct: 400 FNTEPRNFVNFVYAN 414
>gi|17945729|gb|AAL48913.1| RE31829p [Drosophila melanogaster]
Length = 535
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 168/375 (44%), Gaps = 48/375 (12%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D D ++ W E ++P + ++LAV KKV E+R W K KF + ++T
Sbjct: 75 DADITVPPPEVKENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRK-KFPAQMCLLT 133
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVER 243
G G GKT T+R + G +L EW P + + TG Y S L+ F++F+ R
Sbjct: 134 GPTGAGKTTTLRVLTKEFGYQLQEWINPIDCEVVNTLGDQTTGASYVGSHLEAFKSFLLR 193
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
RY S +S++ +LL++D P +++ FE L + +S P ++
Sbjct: 194 ASRYKSLL-----DSQNKRLLLVEDFPNVLLSDKEVNFEELLEEYTAYGKS---PLVFIV 245
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-----YS 355
+ K+ ++ + + F + + ++ N I + +++++ C Q Y
Sbjct: 246 AD-AKSRGLNISYRLFPD--QLKAKHRIEHISFNAIASTIMQKSMKTFCSVMQQNKATYK 302
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLK---QDPMLNLSLSISKPNFPEEKADGHGG 411
+ ST +D + + GDIR A+ +L SSLK P L++S+S + +
Sbjct: 303 VPSTAVVDSIVVGAQGDIRNALINLHLSSLKGVSSMPTKQLNVSVSA----KGRKKKMQS 358
Query: 412 FSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
GRDE+++L HALG+ L+ K D + + +PE++
Sbjct: 359 TLKSIGRDESITLMHALGRVLNPKFNEDKTM-------------------LHSPEEITEA 399
Query: 472 AHGQARPVLDFLHEN 486
+ + R ++F++ N
Sbjct: 400 FNTEPRNFVNFVYAN 414
>gi|406863184|gb|EKD16232.1| Rad17 cell cycle checkpoint protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 899
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 148/358 (41%), Gaps = 89/358 (24%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAE++ P +LE+LAV RKKV +VRAW E +G + +L++ G AG GKT TV +
Sbjct: 224 WAERFAPANLEDLAVHRKKVSDVRAWLEGVMG---GRMRQRLLILKGAAGTGKTTTVHLL 280
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG---------- 248
A + + EW P + + + Y S +FE F+ R ++G
Sbjct: 281 AKDMNCGVLEWRNP--------VGSVASSDGYLSMSAQFEEFMGRGGKFGQLDIFSTDGQ 332
Query: 249 -STSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRSTH------------ 293
+ P I + ++LI++ P T R TA + R ++ + S
Sbjct: 333 VAPKPEIKPLDRRKNLILIEEFPNTFSRSSTALQSFRSTIVTYLASNTPPLSMMNYNSKD 392
Query: 294 --IPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTLSK 347
P ++++E + ++A SF + IL G + N I + + L
Sbjct: 393 PITPVVMIISET-LLTTTSASADSFTVHRLLGPEILQHPGVGVIEFNAIAPTILVKALEL 451
Query: 348 ICRQE--QYSLSTEQIDLVAQASG--GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
+ ++E + T LV + G GDIR AI SL+F L+ D
Sbjct: 452 VVQKESRKSGRRTTPGPLVLKKIGEVGDIRSAIGSLEFLCLRGD---------------- 495
Query: 404 EKADGHGGFSIQFG------------------------RDETLSLFHALGKFLHNKRE 437
DG G + FG R+ +L +FHA+GK +HNKRE
Sbjct: 496 --LDGQWGAKVAFGKTKKASKETPLTTMEAESLELVTRREASLGIFHAVGKVVHNKRE 551
>gi|46108176|ref|XP_381146.1| hypothetical protein FG00970.1 [Gibberella zeae PH-1]
Length = 859
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 158/356 (44%), Gaps = 65/356 (18%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A+A++ T+ W+E++ P++LEE+AV +KKV +VR W E+ + + +L++ G AG
Sbjct: 188 ATANNDTRP-WSERFGPKNLEEIAVNKKKVSDVRRWLEDVMA---GRMRQRLLILKGAAG 243
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
GKT T+R +A+ +G L EW P +GL + S +FE F+ R ++G
Sbjct: 244 SGKTTTMRLLANDMGCELLEWRNPA----------GSSGLGFVSASAQFEEFLGRGGKFG 293
Query: 249 STSPSIPG------------ESKSSAILLIDDLPVTNGR--TAFERLRQCLL-LLVRSTH 293
+ +P +S S ++LI++ P T + TA R +L L +T
Sbjct: 294 ALDTDVPTLPSSQSSSQAARKSDSKRVILIEEFPNTFAKSSTALTSFRNTILQYLANNTP 353
Query: 294 --------------IPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNP 335
P ++++E + ++A SF + IL G + N
Sbjct: 354 SLSIFAKPSQQEPVTPVVMIISET-HLTTTSASADSFTAHRLLGPEILQHPGVGMIEFNA 412
Query: 336 ITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLN 391
I + + L I ++E + L GDIR A +SL+F LK D +
Sbjct: 413 IAPSFLLKALELIVQKEARKSGRRKTPGPQVLKRLGEIGDIRNAASSLEFLCLKGDQQGD 472
Query: 392 LSLSISKPNFPEEKADGHGGFSIQFGRDETLSL----------FHALGKFLHNKRE 437
++ F ++ + G +E+L L FHA+GK ++NKR+
Sbjct: 473 WGNKVA---FTKQTKGTKDAIKLTQGEEESLELISQREASLGIFHAVGKVVYNKRD 525
>gi|342879710|gb|EGU80947.1| hypothetical protein FOXB_08506 [Fusarium oxysporum Fo5176]
Length = 857
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 163/373 (43%), Gaps = 71/373 (19%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
+F+ P + + P+ D+ + W+E++ PR+LEELAV +KKV +VR W E+ +
Sbjct: 176 KFIKPPKPVPIARPNDDA--------RPWSERFGPRNLEELAVHKKKVSDVRRWLEDVIA 227
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +L++ G AG GKT T+R +A+ +G+ L EW P +GL +
Sbjct: 228 ---GRMRQRLLILKGTAGSGKTTTMRLLANDMGSELLEWRNPA----------GSSGLGF 274
Query: 231 TSKLDEFENFVERIRRYGS--TSPSIPGESKSSA---------ILLIDDLPVTNGR--TA 277
S +F+ F+ R ++G+ T S+ SS ++LI++ P T R TA
Sbjct: 275 VSASAQFQEFLGRGGKFGALETDTSVSSTQNSSQTTRKDDSKRVILIEEFPNTFSRSSTA 334
Query: 278 FERLRQCLL-LLVRSTH--------------IPTAVVLTECGKADSVDSTAQSFEELQ-- 320
R +L L ST P ++++E + ++A SF +
Sbjct: 335 LTSFRNTVLQYLANSTPTLSMFAKPSQHEPITPVVMIISET-HLTTTSASADSFTAHRLL 393
Query: 321 --SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQ 374
IL G + N I + + L + ++E + L GDIR
Sbjct: 394 GPEILQHPGVGMIEFNAIAPSLLLKALELVVQKEARKSGRRKTPGPQVLKRLGEIGDIRN 453
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDETLSL 424
A++SL+F LK D + +K ++ + G R+ +L +
Sbjct: 454 AVSSLEFLCLKGDQQGDWG---NKVVLTKQTKGAKDAIKLTQGEEESLEQVSQREASLGI 510
Query: 425 FHALGKFLHNKRE 437
FHA+GK ++NKR+
Sbjct: 511 FHAVGKVVYNKRD 523
>gi|408399234|gb|EKJ78357.1| hypothetical protein FPSE_01462 [Fusarium pseudograminearum CS3096]
Length = 860
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 159/356 (44%), Gaps = 65/356 (18%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A+A+ T+ W+E++ P++LEE+AV +KKV +VR W E+ + + +L++ G AG
Sbjct: 189 ATANDDTRP-WSERFGPKNLEEIAVNKKKVSDVRRWLEDVIA---GRMRQRLLILKGAAG 244
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
GKT T+R +A+ +G L EW P +GL + S +FE F+ R ++G
Sbjct: 245 SGKTTTMRLLANDMGCELLEWRNPA----------GSSGLGFVSASAQFEEFLGRGGKFG 294
Query: 249 STS---PSIPG---------ESKSSAILLIDDLPVTNGR--TAFERLRQCLL-LLVRSTH 293
+ P++P +S S ++LI++ P T + TA R +L L +T
Sbjct: 295 ALDTDVPTLPSSQSSSQAVRKSDSKRVILIEEFPNTFAKSSTALTSFRNAILQYLANNTP 354
Query: 294 --------------IPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNP 335
P ++++E + ++A SF + IL G + N
Sbjct: 355 SLSMFAKPFQQEPVTPVVMIISET-HLTTTSASADSFTAHRLLGPEILQHPGVGMIEFNA 413
Query: 336 ITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLN 391
I + + L I ++E + L GDIR A +SL+F LK D +
Sbjct: 414 IAPSFLLKALELIVQKEARKSGRRKTPGPQVLKRLGEIGDIRNAASSLEFLCLKGDQQGD 473
Query: 392 LSLSISKPNFPEEKADGHGGFSIQFGRDETLSL----------FHALGKFLHNKRE 437
++ F ++ + G +E+L L FHA+GK ++NKR+
Sbjct: 474 WGNKVA---FTKQTKGTKDAIKLTQGEEESLELISQREASLGIFHAIGKVVYNKRD 526
>gi|19718790|ref|NP_579919.1| cell cycle checkpoint protein RAD17 isoform 4 [Homo sapiens]
gi|4050044|gb|AAC97951.1| RAD17 isoform 4 [Homo sapiens]
gi|119571672|gb|EAW51287.1| RAD17 homolog (S. pombe), isoform CRA_f [Homo sapiens]
Length = 584
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 170/377 (45%), Gaps = 47/377 (12%)
Query: 150 ELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW
Sbjct: 5 ELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEW 64
Query: 210 DTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSA 262
P +Q + M N ++ Y S++ F+ F+ R +Y
Sbjct: 65 INPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKK 124
Query: 263 ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
I+L++DLP R + L + L VR P ++++ D+ Q + I
Sbjct: 125 IILVEDLPNQFYRDS-HTLHEVLRKYVRIGRCPLIFIISDSLSGDN----NQRLLFPKEI 179
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQA 375
+ ++ NP+ + + L++I E + ++L+ Q GDIR A
Sbjct: 180 QEECSISNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSA 239
Query: 376 ITSLQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGR 418
I SLQFS SLK D +L+ S KP+ F ++ G G+
Sbjct: 240 INSLQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GK 293
Query: 419 DETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQAR 477
D +L LF ALGK L+ KR + L ++D ++ R L ++ PE+V+ +H
Sbjct: 294 DVSLFLFRALGKILYCKRAS--LTELDSPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGD 350
Query: 478 PVLDFLHENCWLDIMRQ 494
+LH+N ++D +
Sbjct: 351 LFNLYLHQN-YIDFFME 366
>gi|350295545|gb|EGZ76522.1| hypothetical protein NEUTE2DRAFT_146344 [Neurospora tetrasperma
FGSC 2509]
Length = 944
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 62/344 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P +LEELAV ++KV +VR W E+ + + +LV+ G AG GKT T++ +
Sbjct: 238 WSERFAPTNLEELAVHKRKVGDVRKWLEDVIA---GRMRQRLLVLKGAAGTGKTTTLKLL 294
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG---------- 248
A + + EW P + + G Y S +FE F+ R R++G
Sbjct: 295 AEDMRCEVLEWRNPASS------YGVPQG--YQSASSQFEEFLGRGRKFGQLDLEGDSPL 346
Query: 249 -STSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ +P+I ++ ++LI++ P T R TA R + + + + P +
Sbjct: 347 PALAPTINTSNQGRRVILIEEFPNTFMRSSTALTNFRNTIYEFL-AANTPALTPFGQTPP 405
Query: 306 ADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTLS 346
ADS+ ++A SF + IL G + NPI + + L
Sbjct: 406 ADSIVPIVMVISETLLTTTSASADSFTAHRLLGPEILRHPGTGVIEFNPIAPSLLAKALE 465
Query: 347 KICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFP 402
+ ++E LV + G GDIR AI SL+F +K D + SK F
Sbjct: 466 LVVKKEARRSGRRMTPGPLVLKRLGEIGDIRNAIASLEFLCVKGDDDADWG---SKIAFT 522
Query: 403 EEKADGHGGFSIQFG----------RDETLSLFHALGKFLHNKR 436
+ K G ++ G R+ TL +FHA+GK ++NKR
Sbjct: 523 KTK-KGSKDAALTKGEQESLELISQREATLGIFHAVGKVVYNKR 565
>gi|255939530|ref|XP_002560534.1| Pc16g01160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585157|emb|CAP92786.1| Pc16g01160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 833
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 166/380 (43%), Gaps = 57/380 (15%)
Query: 106 KENVGRFL-TPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW 164
++ RFL + R +G + A+ ++ WA+++ P +L ELAV +KKV +V+ W
Sbjct: 174 RKTTKRFLLSTDRGDGTAKEPLAAQPANEPDRRPWAQRFAPANLGELAVHKKKVSDVQHW 233
Query: 165 FEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNC 224
E+ + S +LV+ G AG GKT TV ++ LG + EW P + +
Sbjct: 234 LEDAFAGRR---SERLLVLRGPAGSGKTTTVSLLSESLGYDIVEWKNPPVSEF------- 283
Query: 225 KTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE--------SKSSAILLIDDLPVTNGR- 275
+Y S FE F+ R ++G E + ILLI++ P GR
Sbjct: 284 -GARDYQSVSAHFEEFLGRGNKFGGLDLEDASELDSQKEEKPRDQRILLIEEFPTMLGRA 342
Query: 276 ----TAFERLRQCLLLL-----VR----STHIPTAVVLTEC--GKADSVDSTAQSFEEL- 319
TAF Q L VR S H P ++++E G A S+ L
Sbjct: 343 SSALTAFRTSLQRYLAASANDHVRGSSGSNHPPIVIIVSETLLGSASSISDNMTVHRLLG 402
Query: 320 QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ------IDLVAQASGGDIR 373
+I G + N I + + L I +E + Q ID +++ GDIR
Sbjct: 403 PTIYNHPGTTILDFNSIAPTFMHKALRSILDREARTSRRMQIPGPGVIDSISEI--GDIR 460
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFS--------IQFGRDETLSLF 425
AI+SL+F LK D +++K +KA G + + R+ +L +F
Sbjct: 461 SAISSLEFLCLKGDDTGRWGGNVAK----TKKARGEVALTAMEKESLKMITQREASLGMF 516
Query: 426 HALGKFLHNKRETDNLVKMD 445
HA+GK ++NKR +L++ D
Sbjct: 517 HAVGKIVYNKRMDPSLIEGD 536
>gi|410925286|ref|XP_003976112.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Takifugu
rubripes]
Length = 604
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 163/389 (41%), Gaps = 62/389 (15%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W ++Y P ELAV +KK+EEV W SK +L++TG +G GKT TVR +
Sbjct: 66 WVDRYSPSCQAELAVHKKKIEEVENWLRIHTTTSK----GGILLLTGPSGCGKTTTVRVL 121
Query: 199 ASHLGARLYEWDTPTPTIWQ------EYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
A L R++EW + E+ N GL Y+S+ +F F+ R +Y
Sbjct: 122 AQELSIRIHEWTNSSNMESYSSSSQYEFRMN---GLSYSSQSAQFREFLLRANKYNWLKI 178
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV--D 310
+ ++L++D P R L L VRS+ P +++ DSV D
Sbjct: 179 VGDDGTTDKKLILVEDFPNQFLRQ-HGSLHDILRQFVRSSRCPLVFIMS-----DSVNRD 232
Query: 311 STAQSF--EELQSILVDAGARKVALNPITNGSIKRTLSKICRQE-------QYSLSTEQI 361
S+++S ++LQ L ++ NP+ ++ + L++I E L +
Sbjct: 233 SSSRSLFPKDLQEEL---NITNISFNPVAPTAMMKVLTRISTVEAGKSCGKMCVLDAAAL 289
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF----- 416
+ + S GDIR A+ SLQF S D L P+ ++ + Q
Sbjct: 290 ESLCSGSSGDIRSALNSLQFISFP-DKALWTRKDRHVPSGIKQMKKKRSKKTKQMDQEPA 348
Query: 417 --GRDETLSLFHALGKFLHNKRE--------TDNLVKMDQDAFVVKDKFSRLPLKMDAPE 466
G+D +L LF ALGK LH K +L +D ++ PE
Sbjct: 349 IGGKDASLFLFRALGKILHCKPAQCAPGPALPSHLAHHQRDPLLI------------TPE 396
Query: 467 KVLSQAHGQARPVLDFLHENCWLDIMRQT 495
V+ +H +LH+N +LD +
Sbjct: 397 MVVEHSHMSGEVFNLYLHQN-YLDFFSEV 424
>gi|405963117|gb|EKC28717.1| Cell cycle checkpoint protein RAD17 [Crassostrea gigas]
Length = 902
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 157/346 (45%), Gaps = 68/346 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
+LW++K+ P+S+ +LAV +KK+EE++ W + L ++K S VL +TG AG GK+A V+
Sbjct: 97 ELWSDKHTPKSVSDLAVHKKKIEELQTWLQRHL-NTKSMRSPMVL-LTGPAGAGKSALVQ 154
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS------- 249
+A L L EW P + E S LD N+ + R GS
Sbjct: 155 VLAKELNCELKEWSNPIAAAYDEL-----------SFLDRRNNWSDYSRVEGSYSSSQLS 203
Query: 250 ------------TSPSIPGESKSSAILLIDDLP--VTNGRTAFERLRQCLLLLVRSTHIP 295
S I G I+L+++ P V T+F + L + P
Sbjct: 204 QFQQFLLRADKYNSLDIFGNGTQGKIILVEEFPNIVYKDATSFHDI---LRKYSKVGRCP 260
Query: 296 TAVVLTECGKADSVDSTAQSFEEL---QSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
++++ S+ +S E L + + + ++ NPI ++ + L+KI +E
Sbjct: 261 LIFIISDS-------SSGESNERLLFPKHLQEELHIENISFNPIAATTMLKILTKIATEE 313
Query: 353 ------QYSLSTEQ-IDLVAQASGGDIRQAITSLQFSSLK--QDPMLNLS---------- 393
++S+ ++ I+ ++ +S GDIR AI +LQF+ LK D + S
Sbjct: 314 AAHGMHKFSIPSKAVIESISMSSAGDIRGAINALQFACLKDTHDLLPTTSKGRQSKKKTS 373
Query: 394 --LSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
S SK + AD + GRD +L LF ALGK L+ KR+
Sbjct: 374 GEASKSKRAGNKSSADSDSTLAAIGGRDTSLFLFRALGKILYCKRD 419
>gi|396471870|ref|XP_003838972.1| hypothetical protein LEMA_P026450.1 [Leptosphaeria maculans JN3]
gi|312215541|emb|CBX95493.1| hypothetical protein LEMA_P026450.1 [Leptosphaeria maculans JN3]
Length = 879
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 71/355 (20%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGK 191
S Q+ W EKY P SLEELAV ++KV +VR+W + G S+ + +L++ G AG K
Sbjct: 188 SEDQRPWTEKYGPVSLEELAVHKRKVADVRSWLTDVFNGKSRKR----LLLLKGPAGSAK 243
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T T+ ++ LG ++EW PT + T + S +FE+FV R +GS
Sbjct: 244 TTTMALLSKELGIAMHEWKNPT--------GSMSTSENFASATAQFEDFVGRTGTFGSL- 294
Query: 252 PSIPGESKSSA-------------ILLIDDLPVTNGRT--AFERLRQCLL-LLVRSTH-- 293
+ G S+ S ++L+++ P T RT A + R ++ L +T
Sbjct: 295 -TFDGVSQGSQHSVSSNSSSRQKQLVLVEEFPNTFTRTSSAVQAFRSSIINYLTANTQSA 353
Query: 294 --------------IPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNP 335
P ++++E + + + A SF + +IL G + NP
Sbjct: 354 TTFFNGQADTELSVTPIVMIISETLLSTNT-AAADSFTAHRLLGPAILTHPGVSVIEFNP 412
Query: 336 ITNGSIKRTLSKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
I + + L I +E + +L + I +A+ GDIR A++SLQF +++D
Sbjct: 413 IAPTYMTKALDTIVVKEARRSGRRNTLGPQAIQRLAEL--GDIRSAVSSLQFLCVRRDDA 470
Query: 390 LNLSLSISKPNFPEEKADG--------HGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ NF ++K + R+ TL +FHA+G+ ++NKR
Sbjct: 471 EGWGAKV---NFAKKKGSKDLVMTKMEQESLELVTQRESTLGIFHAVGRVVYNKR 522
>gi|388580192|gb|EIM20509.1| checkpoint protein Rad24 [Wallemia sebi CBS 633.66]
Length = 488
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 44/331 (13%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W+E Y P + ELAV +KV ++R W EE D+K +LV+TG AG GK+ V+
Sbjct: 1 MWSEFYAPSKVSELAVHSRKVGDLRHWLEESFSDTKLSKYRKLLVLTGTAGCGKSTAVKL 60
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A + + E+ + +Y + + G E TSK F NF+ + Y S E
Sbjct: 61 LAKEMNVDVIEYLNEST---YKYSNEDEYG-ESTSK--RFSNFLGKSATYKPL--SFDNE 112
Query: 258 SKSSAILLIDDLP----VTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGKADSVDST 312
+ ++L++DLP T + + LR C L R+ ++P +++++ G + +
Sbjct: 113 RSNKQLILVEDLPNVLEYTTREASHDALRGHC--LDGRTPNVPIVIIVSDSGVRGTGGNA 170
Query: 313 AQSFEELQSILVDAGA------------RKVALNPITNGSIKRTLSKICRQEQ------- 353
+ + +VDA + NPI +K+ L+ + + +
Sbjct: 171 DEMVQTTNRDVVDARTVVPRDILDGPFCTTIHFNPIARTFLKKHLNALLDRHRDDNPYGS 230
Query: 354 -YSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSI------SKPNFPEEKA 406
E ID++ + GDIR AI +LQ +S P SLS +KP +
Sbjct: 231 FKRPHDEAIDVIIDTASGDIRSAINTLQLASQMALPG---SLSTGGHKRKAKPLSKSTRV 287
Query: 407 DGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
D + R+ +L+LFH+L K L NKR
Sbjct: 288 DMEKTLDVLARREVSLNLFHSLAKVLRNKRH 318
>gi|397509306|ref|XP_003825069.1| PREDICTED: LOW QUALITY PROTEIN: cell cycle checkpoint protein
RAD17-like [Pan paniscus]
Length = 681
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 165/374 (44%), Gaps = 41/374 (10%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN+ +LE + +G + + GL N + S + +KYKP S ELA
Sbjct: 50 KNEASTLESKILPARKIGNLSSLEQIYGLEN-----SKDYLSENEPXVDKYKPESXHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V KK+EEV W + ++ + + K ++L+ITG G GKT T + ++ G ++ EW P
Sbjct: 105 VHEKKIEEVETWXKAQVLERQPKQDGSILLITGPPGCGKTMTKKTLSKENGIQVQEWINP 164
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M + ++ Y S++ + F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKGMFHTESSFHMFPYQSQIAVCKEFLLRATKYNKLQMLGDHLRTDKKIIL 224
Query: 266 IDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
++DLP + + T E LR+ V+ P ++++ ++ QSF + I
Sbjct: 225 VEDLPNQFIXDSHTLHEVLRK----YVKIGRYPFICIISDSLSGEN----NQSFLFPKEI 276
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQA 375
+ ++ NP+ + + L++I E + ++++ Q GD+R A
Sbjct: 277 REEHSTSNISFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLEVLCQGCSGDMRSA 336
Query: 376 ITSLQFSSLKQDPML-----------NLSLSISKPNFPEEKADGHGGFSIQFGRDETLSL 424
I SLQ SS K + L N +LS SK ++ G+D +L L
Sbjct: 337 INSLQISSSKGEDNLWPRKKRMSLKSNATLSKSKRRKKTDRVFESQEVQATGGKDVSLFL 396
Query: 425 FHALGKFLHNKRET 438
F ALGK L++KR +
Sbjct: 397 FRALGKILYSKRAS 410
>gi|336465248|gb|EGO53488.1| hypothetical protein NEUTE1DRAFT_126784 [Neurospora tetrasperma
FGSC 2508]
Length = 944
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 151/344 (43%), Gaps = 62/344 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P +LEELAV ++KV +VR W E+ + + +LV+ G AG GKT T++ +
Sbjct: 238 WSERFAPTNLEELAVHKRKVGDVRKWLEDVIA---GRMRQRLLVLKGAAGTGKTTTLKLL 294
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG---------- 248
A + + EW P + + G Y S +FE F+ R R++G
Sbjct: 295 AEDMRCEVLEWRNPASS------YGVPQG--YQSASSQFEEFLGRGRKFGQLDLEGDSPL 346
Query: 249 -STSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ +P+ ++ ++LI++ P T R TA R + + + + P +
Sbjct: 347 PALAPTTNTSNQGRRVILIEEFPNTFMRSSTALTNFRNTIYEFL-AANTPALTPFGQTPP 405
Query: 306 ADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTLS 346
ADS+ ++A SF + IL G + NPI + + L
Sbjct: 406 ADSIVPIVMVISETLLTTTSASADSFTAHRLLGPEILRHPGTGVIEFNPIAPSLLAKALE 465
Query: 347 KICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFP 402
+ ++E LV + G GDIR AI SL+F +K D + SK F
Sbjct: 466 LVVKKEARRSGRRMTPGPLVLKRLGEIGDIRNAIASLEFLCVKGDDDADWG---SKIAFT 522
Query: 403 EEKADGHGGFSIQFG----------RDETLSLFHALGKFLHNKR 436
+ K G ++ G R+ TL +FHA+GK ++NKR
Sbjct: 523 KTK-KGSKDAALTKGEQESLELISQREATLGIFHAVGKVVYNKR 565
>gi|328713129|ref|XP_001948452.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Acyrthosiphon
pisum]
Length = 480
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 148/355 (41%), Gaps = 58/355 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W Y P+S+ +LAV K++EV+ WFE +S K + +L++TG G K TV+ I
Sbjct: 52 WCNIYTPQSVSKLAVHNGKIKEVKQWFESLNNNSLIK--SKILLVTGPTGCAKATTVKLI 109
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A EW TP TI Y C G Y + D+F++F+ RY S +
Sbjct: 110 AKQCDFICLEWITPM-TIEPIY-DQCTDGYFYQNVQDKFQDFIWGATRYRSLKCGV---- 163
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ LL+ D+P + ++ + P ++ + ST S E+
Sbjct: 164 SNGQFLLVKDIPNIFLDKP-DEFHDIMMRFNTPSQFPIVFIINNEKIIRDLFSTEIS-EK 221
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS------LSTEQIDLVAQASGGDI 372
L+ +++ NPIT S+ L +I + EQ ++ + + + + GD+
Sbjct: 222 LK-------VQQIKFNPITRKSVLAVLEQIVKSEQQKNKLVRLPNSSEFNAIYDETNGDL 274
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFL 432
R +I +L F+ +N+ ISK DE L LFH++G+ +
Sbjct: 275 RASIINLSFTC------MNIQNKISKK-------------CSSISMDENLDLFHSIGRVI 315
Query: 433 HNKRETDNLVKMDQDAFVVKDKFSRLPLKM-DAPEKVLSQAHGQARPVLDFLHEN 486
+ KRE N S L K P+K++ Q VL FL EN
Sbjct: 316 YPKREIVN---------------SSLQFKFTHNPDKLVENFAMQPTTVLGFLQEN 355
>gi|242213428|ref|XP_002472542.1| predicted protein [Postia placenta Mad-698-R]
gi|220728336|gb|EED82232.1| predicted protein [Postia placenta Mad-698-R]
Length = 638
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 164/359 (45%), Gaps = 57/359 (15%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKD---KFSTNVLVITGQ 186
S+ + LW ++ +P + ++LAV ++KV +VR W E K +L +TG
Sbjct: 53 SSGQYSDSLWVDRCEPVTQDDLAVHKRKVSDVRQWLLESFSGGPSGRLKQYRRILALTGP 112
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTG-----LEYTSKLDEFENFV 241
AG KTAT+R ++ L + EW T W G +EY S +D+F +F+
Sbjct: 113 AGTAKTATLRVLSRELNFEIMEWRNSTDEQWSRDTAFKDDGADVGHMEYESLVDKFRSFL 172
Query: 242 ERI-----------RRYGSTSPSIPGESKSS----AILLIDDLPVT---NGRTAFERLRQ 283
R + Y S+ S S + ++L++DLP + +F +
Sbjct: 173 ARAGTCQPLAQSSSQPYASSQASTVQSSVTPDGKRHVILLEDLPNILHLGTQASFHSAIE 232
Query: 284 CLLLLVRSTHIPTAVVLTECG-KADSVDSTAQSFE------ELQSILVDA-----GARKV 331
+ L ++ P +++++ G + + V++ S+ +++S+L + +V
Sbjct: 233 EFVSLPATSVAPLVIIVSDAGLRGEDVENDGGSWRRGKEAVDVRSVLPPSLINSPYVTQV 292
Query: 332 ALNPITNGSIKRTLSKICRQEQYSL-----STEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
NPI ++ L + + +S+ E ID++ ++S GDIR AI +LQF+ L +
Sbjct: 293 RFNPIAPSLMRPALQTLLDKHFHSVPDNLPPKEVIDVIVESSNGDIRSAIMALQFACLTK 352
Query: 387 DPMLNLSLSI--SKPNFPEEKADGHGGFSIQFG----RDETLSLFHALGKFLHNKRETD 439
++ K N + + + G R+++L+LFH LGK L+NKR+ D
Sbjct: 353 AGAQAGGATVKGGKQNISQAR--------VMLGAITRREQSLALFHLLGKLLYNKRKGD 403
>gi|195391236|ref|XP_002054269.1| GJ22898 [Drosophila virilis]
gi|194152355|gb|EDW67789.1| GJ22898 [Drosophila virilis]
Length = 512
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 161/363 (44%), Gaps = 48/363 (13%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E + P + ++LAV KKV +VR W + + K + ++TG AG GKTAT+R +
Sbjct: 76 WMEGFAPTTSDDLAVHPKKVCDVRNWLQH-CEAMRKKHPAQICLLTGPAGCGKTATLRVL 134
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVERIRRYGSTSPSIPGE 257
A G L EW PT + + Y S+L F++F+ R RY S
Sbjct: 135 AQEFGYELQEWINPTDCEEINALGDQPNEGSYMGSQLVAFKSFLLRASRYKSLL-----T 189
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+++ +LL++D P + A L V P ++ DS +++
Sbjct: 190 AQNKRLLLVEDFPNVLLKDATATFEDLLDEYVNYGKSPLVFIV--------ADSKSRALN 241
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTL--------SKICRQEQ----YSLSTEQI-DLV 364
+ D K+ + I+ SI T+ + + +Q+Q Y + T+ + D +
Sbjct: 242 ISYKLFTDQLKAKLRIEHISFNSIAATIMQKSMKRFATMMQQQQHKALYKVPTQTVLDSI 301
Query: 365 AQASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLS 423
+ GDIR A+ +L F SLK P M L+++ + ++ + SI GRDE+++
Sbjct: 302 VVCAQGDIRNALINLHFGSLKGAPSMATKQLNVTATSKGRKRKATNTLKSI--GRDESIT 359
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL 483
+ HALG+ + K DN DK + +PE++ + R ++F+
Sbjct: 360 MMHALGRVFNPKYNEDN------------DK-----CLLHSPEEIAEAFCIEPRNFINFV 402
Query: 484 HEN 486
H N
Sbjct: 403 HAN 405
>gi|357620856|gb|EHJ72893.1| hypothetical protein KGM_07855 [Danaus plexippus]
Length = 488
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 156/368 (42%), Gaps = 60/368 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W + + P ++E+LAV KKV E+ W + S + N+L+++G G GKTA+++ +
Sbjct: 59 WMKNFDPVNIEDLAVNNKKVLELEEWMKNTCLKSNN----NILLLSGPVGCGKTASIQTL 114
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE-------NFVERIRRYGSTS 251
AS ++ EW TP +EY S+ E+E F+E I + +
Sbjct: 115 ASKYNIKITEWITP-------------LDIEYPSEYGEYEFKEPQTKKFLEFIINSANYT 161
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+ ++ S ++L++D P RT E + L + P + +E D+
Sbjct: 162 SLV--DNNSCKLVLVEDFPNIFMRTPAE-FTEVLTQYKQRAKSPIVFICSE----SHTDT 214
Query: 312 TAQSFEELQSILVDA-GARKVALNPITNGSIKRTLSKICRQEQYSLST-------EQIDL 363
SF S L + + N +T +K L + S+ E ID
Sbjct: 215 KNTSFNLFSSSLKEQFQIHHIMFNAVTLTGLKAALKRASAIMNSKFSSTYNNPTNEIIDS 274
Query: 364 VAQASGGDIRQAITSLQFSSLKQDPMLNLSLSI-----SKPNFPEEKADGHGGFSIQFGR 418
V +SGGD+R AI +L F+ LK NL SI SK + + G+
Sbjct: 275 VVNSSGGDVRSAILNLHFACLKGS-TCNLETSIIKEKESKSKTTTRRKKNVSNKFMTLGK 333
Query: 419 DETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARP 478
D+T+S+ H +G+ L N +ET V ++ L P+ ++ Q
Sbjct: 334 DQTVSILHGVGRVL-NPKET-----------VTENGHKTL---THNPKDIIEQFLSHPSS 378
Query: 479 VLDFLHEN 486
++FLHEN
Sbjct: 379 FVNFLHEN 386
>gi|195036452|ref|XP_001989684.1| GH18931 [Drosophila grimshawi]
gi|193893880|gb|EDV92746.1| GH18931 [Drosophila grimshawi]
Length = 518
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 164/378 (43%), Gaps = 38/378 (10%)
Query: 121 LVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV 180
L + D + W E + P +ELAV KK+ +VR W + + K+ +
Sbjct: 60 LTDNGEDGGDTAPVVSDNWMESFAPSVSDELAVHPKKIADVRNWLQH-CEAMRKKYPAQI 118
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++TG AG GKTA VR + LG L EW P + + G S+L F++F
Sbjct: 119 CLLTGPAGCGKTAAVRVLTKELGYALQEWINPVDCEEINALGDQPEGSYVGSQLQAFKSF 178
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
+ R RY S + + +LL++D P + A L V P ++
Sbjct: 179 LLRASRYKSLL-----AAHNKRLLLVEDFPNALLKDAASTFEDLLDEYVNYGKSPLIFIV 233
Query: 301 TECGKADSVDSTAQSF-EELQSIL-VDAGARKVALNPITNGSIKRTLSKICRQEQ----Y 354
+ K+ ++ + + F ++L++ L ++ + + I S+KR + + +QEQ Y
Sbjct: 234 AD-SKSRMLNISYKLFTDQLKTKLRIEHISFNAIASTIMQKSMKRFATLMQQQEQHKALY 292
Query: 355 SLSTEQI-DLVAQASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPNFPEEKADGHGGF 412
T+ + D + + GDIR A+ +L F SL+ P M L+ N G
Sbjct: 293 KAPTQNVLDSIVVCAQGDIRNALINLHFGSLRGAPSMATKQLT----NITSAAGKGRKRK 348
Query: 413 SI----QFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKV 468
+ GRDE++++ HALG+ + K D KDK +L + +PE +
Sbjct: 349 ATSTLKSIGRDESITMMHALGRVFNPKYTED------------KDKDKQL---LHSPETL 393
Query: 469 LSQAHGQARPVLDFLHEN 486
+ R ++F+H N
Sbjct: 394 AEAFCTEPRNFVNFIHAN 411
>gi|350405848|ref|XP_003487570.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Bombus
impatiens]
Length = 460
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 166/399 (41%), Gaps = 78/399 (19%)
Query: 106 KENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWA--EKYKPRSLEELAVQRKKVEEVRA 163
K N+ + L S E V+ +D + L+A E RS EL V R+K +E+
Sbjct: 27 KRNISQVLETSALE--VSSTYDIMPKKKNANSLFALLEACDARSPSELVVSRQKQQEILN 84
Query: 164 WFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN 223
W + ++ K + +L+++G +G GKT +R +A G + EW TP I E
Sbjct: 85 WLQYKV----RKGTPAILILSGPSGCGKTTALRVLARENGFNITEWITPIDQIMDENNRI 140
Query: 224 CKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ 283
+ G D FE F+ R RY S + SS +LL+ D P +E
Sbjct: 141 MRQG-------DRFEEFLIRATRYSSVL-----SNYSSRLLLVKDFP----NVFYEEKES 184
Query: 284 CLLLLVRSTHI---PTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGS 340
LL R I P V TE G + + + +I G + +N +T +
Sbjct: 185 FFSLLQRYFEIGKEPIVFVCTEVGNSKLLQTLFSP-----NIREKFGIDLININSVTQTA 239
Query: 341 IKRTLSKICR------QEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSL 394
+K L +I + +S ++D + S GDIR A+ +L F SLK
Sbjct: 240 MKNALKRITKILNSIAGHMLHVSQNKVDEILSNSIGDIRNALLNLIFISLK--------- 290
Query: 395 SISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR-ETDNLVKMDQDAFVVKD 453
PEE+ + R+E+L L H +G+ ++ KR +T+N K D
Sbjct: 291 ------VPEERENKCN------IREESLGLLHGVGRVINPKRIQTENNWKFVHD------ 332
Query: 454 KFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIM 492
P+++ + QA L+FL EN +L+ M
Sbjct: 333 -----------PDEIAAFFQSQATVFLNFLQEN-YLNTM 359
>gi|380491689|emb|CCF35141.1| Rad17 cell cycle checkpoint protein [Colletotrichum higginsianum]
Length = 874
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 168/406 (41%), Gaps = 81/406 (19%)
Query: 81 LGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWA 140
+G ++R++ N S + QK FL P R D D + W+
Sbjct: 159 VGQNARKRFQDNTPASSSTTVGSSQK-----FLKPPRPTKPAALDDD--------LRPWS 205
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
E++ P +L+ELAV ++KV +VR W E+ + +L++ G AG GKT +R A
Sbjct: 206 ERFGPVNLDELAVHKRKVSDVRKWLEDVVAGRL---RQRLLLLKGAAGSGKTTAMRLXAK 262
Query: 201 HLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKS 260
+G L EW PT T+ L YTS +F+ F+ R ++G P E+
Sbjct: 263 DMGYELLEWRNPTNTLGAH--------LGYTSASAQFQEFLSRGGKFGQLDTDTPTEAPR 314
Query: 261 SA---------ILLIDDLPVTNGR--TAFERLRQCLLLLV-------------RSTHIP- 295
A I+LI++ P T R TA R L+ + RS P
Sbjct: 315 PASEKPDSAGKIILIEEFPNTFSRSSTALTSFRNTLVEYLATNTPSLTTSFGRRSASEPI 374
Query: 296 TAVVL--------TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSK 347
T VVL T ADS TA + IL G R + N I + + L
Sbjct: 375 TPVVLVISETLLTTTSASADSF--TAHRLLGPE-ILRHPGTRIIEFNAIAPTLLAKALEL 431
Query: 348 ICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLK--QDPMLNLSLSISKPNF 401
+ +E ++ L GDIR AI+SL+F LK QD +++SK
Sbjct: 432 VVLKEARKSGRKRTPGPQVLKRLGEIGDIRSAISSLEFMCLKGDQDADWGAKVALSK--- 488
Query: 402 PEEKADGHGGFSIQFG----------RDETLSLFHALGKFLHNKRE 437
+ G + G R+ +L +FHA+GK ++NKRE
Sbjct: 489 --QSKGAKAGIPLTKGEADTLELISQREASLGIFHAVGKVVYNKRE 532
>gi|194740986|ref|XP_001952970.1| GF17539 [Drosophila ananassae]
gi|190626029|gb|EDV41553.1| GF17539 [Drosophila ananassae]
Length = 520
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 157/361 (43%), Gaps = 44/361 (12%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E + P S EELAV KKV EVR+W + KF + ++TG G GKTAT+R +
Sbjct: 76 WIEGFAPSSSEELAVHPKKVGEVRSWLLH-CEAVRKKFPAQICLLTGPTGAGKTATLRVL 134
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVERIRRYGSTSPSIPGE 257
A +G ++ EW P + + +G Y S + F++F+ R RY S
Sbjct: 135 AREMGYQVQEWINPVDCEVVTVLGDQPSGSGYVGSHFEAFKSFLLRASRYKSLL-----V 189
Query: 258 SKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
S+ +LL++D P + G +FE L +S P ++ + K+ ++ + +
Sbjct: 190 SQEKRLLLVEDFPNIFLGEGEASFEELLDDYSSYGKS---PLIFIVADS-KSRGLNISFR 245
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-------YSLSTEQI-DLVAQ 366
F E + + NPI +++++ C Q Y + + + + +
Sbjct: 246 LFPE--QLKAKHRIEHITFNPIATTIMQKSMKSFCSVMQKPHNKTIYKVPAQTVLESIVV 303
Query: 367 ASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLF 425
+ GDIR A+ +L SSL P M L +S + + GRDE+++L
Sbjct: 304 GAQGDIRNALINLHLSSLLGVPSMPTKKLDVSVAATTKGRKTKAQSTLKSIGRDESITLM 363
Query: 426 HALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHE 485
HA+G+ ++ K + D RL +PE + + R ++F+H
Sbjct: 364 HAMGRVMNPK---------------INDS-KRL---QHSPEGITESFRTEPRNFVNFIHA 404
Query: 486 N 486
N
Sbjct: 405 N 405
>gi|429863058|gb|ELA37631.1| cell cycle checkpoint protein rad17 [Colletotrichum gloeosporioides
Nara gc5]
Length = 870
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 163/374 (43%), Gaps = 72/374 (19%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
+FL P+R D D + W+E++ P +L+ELAV ++KV +VR W E+ +
Sbjct: 182 KFLKPTRPTTPAALDDD--------LRPWSERFGPVNLDELAVHKRKVADVRKWLEDVVS 233
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+L++ G AG GKT T+R +A +GA L EW PT L Y
Sbjct: 234 GRL---RQRLLLLKGAAGSGKTTTMRLLAKDMGAELLEWRNPT--------SANGANLGY 282
Query: 231 TSKLDEFENFVERIRRYGSTSPSIPGES----------KSSAILLIDDLPVTNGR--TAF 278
+S +F+ F+ R ++G + E+ + I+L+++ P T R +A
Sbjct: 283 SSASGQFQEFLGRGGKFGQLDLDLTAEAPRPKTEKADPSTQKIILVEEFPNTFSRSSSAL 342
Query: 279 ERLRQCLLLLV------------RSTH---IPTAVVLTECGKADSVDSTAQSFEELQ--- 320
R +L + R +H P +V++E + ++A SF +
Sbjct: 343 TSFRNTILDYLATNTPALSAFGRRPSHEPITPIVLVISET-LLTTTSASADSFTAHRLLG 401
Query: 321 -SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQA 375
IL GA+ + N I + + L + +E ++ L GDIR A
Sbjct: 402 PDILRHPGAKVIEFNAIAPTLLAKALELVVMKEARKSGRKRTPGPQVLKRLGEIGDIRSA 461
Query: 376 ITSLQFSSLK--QDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDETLS 423
I+SL+F LK QD +++SK + G S+ G R+ +L
Sbjct: 462 ISSLEFMCLKGDQDADWGAKVALSK-----QSKGAKAGISMTKGEQDTLELISQREASLG 516
Query: 424 LFHALGKFLHNKRE 437
+FHA+GK ++NKRE
Sbjct: 517 IFHAVGKVVYNKRE 530
>gi|291395478|ref|XP_002714063.1| PREDICTED: RAD17 homolog [Oryctolagus cuniculus]
Length = 537
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 147/317 (46%), Gaps = 42/317 (13%)
Query: 150 ELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
ELAV +KK+EEV W + ++ + + K ++L+ITG G GKTAT++ ++ G + EW
Sbjct: 5 ELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTATIKILSKEHGIHVQEW 64
Query: 210 DTPTPTIWQ----EYMHNCKTG---LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSA 262
P + +Q + M N ++ L Y S+L F+ F+ R +Y +
Sbjct: 65 INPVLSDFQKDDFKEMFNPESSFPLLPYQSQLAAFKEFLLRATKYNKLQMLGDDLRTNKK 124
Query: 263 ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
I+L++DLP R + L + L V+ P ++++ D+ + +E+Q
Sbjct: 125 IILVEDLPNQFYRDS-PSLHEVLRKYVQIGQCPLVFIISDSVSGDN-NHRLLFPKEIQE- 181
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQA 375
+ ++ NP+ + + L++I E + ++ + Q GDIR A
Sbjct: 182 --ECSISNISFNPVAPTIMMKFLNRIVTIEANKNGRKVVVPDRSSLESLCQGCSGDIRSA 239
Query: 376 ITSLQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGR 418
I SLQFS SLK D +L+ S KP+ F ++A G G+
Sbjct: 240 INSLQFSSSKGENNLWPRKKGVSLKSDAVLSKSRRRRKPDRVFENQEAQAIG------GK 293
Query: 419 DETLSLFHALGKFLHNK 435
D +L LF ALGK L+ K
Sbjct: 294 DVSLFLFRALGKILYCK 310
>gi|299739111|ref|XP_001835061.2| hypothetical protein CC1G_06464 [Coprinopsis cinerea okayama7#130]
gi|298403627|gb|EAU86703.2| hypothetical protein CC1G_06464 [Coprinopsis cinerea okayama7#130]
Length = 657
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 159/331 (48%), Gaps = 41/331 (12%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDS-KDKFSTNVLVITGQAGVGKTA 193
QLW + ++P S ELAV +KVE+VR W +E G S K K +L +TG AG GKT+
Sbjct: 97 QLWVDLHEPASEAELAVHVRKVEDVRRWLKEAYEGGPSGKLKKYRRILTLTGPAGTGKTS 156
Query: 194 TVRQIASHLGARLYEWDTPTPTI---WQEYMHNCKTGLEYTSK----LDEFENFVERIRR 246
T++ +A L + EW + W + ++ +Y S +FE F R R
Sbjct: 157 TIKILAKELDFEIVEWRNAIGEVTSSWGQDSYSTGRYQDYDSDSETLFTKFETFFNRAAR 216
Query: 247 YGSTSPSIPGESKSSA-----ILLIDDLPVTNGRTAFERLRQCLLLLVR----STHIPTA 297
+ S P S SS+ ++L++DLP + CL LV +P
Sbjct: 217 CQGLAFSGPSSSSSSSKAKRQLVLLEDLPNILHPKTQSQFHDCLKSLVESPVSDPPVPVV 276
Query: 298 VVLTECG-KADSVD---STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICR--- 350
+++++ G + ++ D + + + + +VD V NPI +++ LS + +
Sbjct: 277 IIISDTGLRGEARDERIAGGFGWGKDKEQVVD-----VRFNPIAPTLMRKALSNMLQAHA 331
Query: 351 --QEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG 408
++ + S + +D+V ++S GDIR AI +LQF+ L Q P + + +A
Sbjct: 332 MHEDFVAPSKQALDIVIESSNGDIRSAIMALQFACLVQGPAAKKRVGANATTVMVTEAVT 391
Query: 409 HGGFSIQFGRDETLSLFHALGKFLHNKRETD 439
R+++L+LFH +GK L+NKR+ D
Sbjct: 392 R--------REQSLALFHLIGKVLYNKRKGD 414
>gi|388852839|emb|CCF53524.1| related to cell cycle checkpoint protein RAD17 [Ustilago hordei]
Length = 812
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 161/362 (44%), Gaps = 66/362 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS-TNVLVITGQAGVGKTATVR 196
LWAEK PRS ++LAV KKV +VR+W E VL +TG AG GK++TVR
Sbjct: 109 LWAEKLAPRSSDQLAVHPKKVAQVRSWLAEAFSSRAATVKYRKVLTLTGPAGAGKSSTVR 168
Query: 197 QIAS--HLGARLYEW---------DTPTPTIWQEYMHN-CKTGLEYTSKLDEFENFVERI 244
+A+ L + EW P P+ + + CK T L N
Sbjct: 169 ALATAPDLDFDILEWQNDQPAFDPSNPAPSFIERFADFLCKAAKFPTLDLKPPSNG---- 224
Query: 245 RRYGSTSPS------IPGESKSSAILLIDDLPVTNG-------RTAFER-LRQCLLLLVR 290
R S S S IP +K + ++L++DLP + + A E+ +RQ L R
Sbjct: 225 -RSNSASSSLLPLDEIPSSAKRNRLILLEDLPNLHHLPTKQLFQAAIEQYIRQSTHLTSR 283
Query: 291 -STHIPTAVVLTECGKADS-----VDSTAQSFEEL------------QSILVDAGARKVA 332
S ++P +++TE + D+++ ++++ ++I D +V
Sbjct: 284 GSANVPILLIVTESTPREDEDRWVADASSSNWQQRIASIIDTRSALGEAIRNDPAYAEVR 343
Query: 333 LNPITNGSIKRTLSKICRQE--------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSL 384
NP+ I + L + Q + E + VA+ S GD+R A+ LQF +
Sbjct: 344 FNPVAPTIIIKALKRAIEQAPPGSGRVLAKGMLMELLQAVAEDSNGDLRAAVNCLQFVGI 403
Query: 385 KQDPMLNLSLSI------SKPNFPEEKAD-GHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
+ +L+ + K EE+++ + GR+ +L+LFHALG+ L+NKRE
Sbjct: 404 NRG-LLHAAAGAKGRKTGKKGATQEERSNITRKLIPLVSGRESSLALFHALGRVLYNKRE 462
Query: 438 TD 439
D
Sbjct: 463 GD 464
>gi|395512077|ref|XP_003760273.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Sarcophilus
harrisii]
Length = 370
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 23/263 (8%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KYKP + ELAV +KK+EE+ W + + + + K ++L+ITG G GKTAT++ +
Sbjct: 85 WVDKYKPETQNELAVHKKKIEELETWLKAHVFEKEPKLGGSILIITGPPGCGKTATLQIL 144
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY---------TSKLDEFENFVERIRRYGS 249
LG L EW P H+ K + S++ F+ F+ R +Y
Sbjct: 145 VKELGITLQEWI--NPVFLDSRRHDMKDEFNHESSFHVVPNQSQVTIFQEFLLRANKYNK 202
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
++L++D+P R L + L V+ P ++++ DS
Sbjct: 203 LQMVGDCLHTDKKMILVEDMPNQFYRDP-STLHEILRRFVQLGRCPLIFIISDSLSGDS- 260
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-------YSLSTEQID 362
Q + I + ++ NP+ + + LS+I E ++
Sbjct: 261 ---NQRLLFPKEIQEECSISNISFNPVAPTIMMKVLSRIAVLEANMGGGKIVVPDKSSLE 317
Query: 363 LVAQASGGDIRQAITSLQFSSLK 385
L+ + GDIR AI SLQFSS K
Sbjct: 318 LLCKGCSGDIRSAINSLQFSSFK 340
>gi|407915681|gb|EKG09229.1| Checkpoint protein Rad24 [Macrophomina phaseolina MS6]
Length = 854
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 159/365 (43%), Gaps = 86/365 (23%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW------FEERLGDSKDKFSTNVLVI 183
S ++ + + W EKY P +L+ELAV +KKV +VRAW F ER +LV+
Sbjct: 143 SDANQSDRPWVEKYGPVNLDELAVHKKKVADVRAWLTNVFDFRER---------KRLLVL 193
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPT------------IWQEYMHNCKTG-LEY 230
G AG KT TV ++ H+G + EW P + +++++M K G L++
Sbjct: 194 KGPAGTAKTTTVNLLSKHVGFEINEWKNPIGSEFSSDTFVSLSALFEDFMGRSKFGSLDF 253
Query: 231 TSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCL--- 285
T+ +DE N + + + ILLI++ P T R TA + R +
Sbjct: 254 TTGVDERSNKPD-------------ADVTTKQILLIEEFPNTFTRSSTALQSFRLAIEQH 300
Query: 286 ---------LLLVRS--THIPTAVVL--------TECGKADSVDSTAQSFEELQSILVDA 326
+ R+ T PT VV+ T ADS TA I+
Sbjct: 301 LSASLPSLGSMFTRAADTSPPTPVVMIISETLLSTNTAAADSF--TAHRLLG-PDIINHP 357
Query: 327 GARKVALNPITNGSIKRTLSKICRQEQYS---LSTEQIDLVAQASG-GDIRQAITSLQFS 382
G + NPI + + L + +E +T ++ + S GD+R AI++L+F
Sbjct: 358 GTTIIEFNPIAPTFLTKALELVVAKEARQSGRKTTPGPQVIKKLSEIGDVRSAISTLEFL 417
Query: 383 SLKQDPMLNLSLSIS----------KPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFL 432
L+ D N S ++ KP E+ ++ R+ TL +FHA+GK +
Sbjct: 418 CLRGDDDANWSSRVTFKASKKGAREKPMTKMERES----LALVTQRESTLGIFHAVGKVV 473
Query: 433 HNKRE 437
+NKRE
Sbjct: 474 YNKRE 478
>gi|341038620|gb|EGS23612.1| putative checkpoint protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 970
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 148/349 (42%), Gaps = 60/349 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E++ P L+ELAV ++KV++VR W ++ ++ +LV+ G AG GKT TVR +
Sbjct: 259 WPERFAPADLDELAVHKRKVQDVRRWLDDVF---SNRLRQRLLVLKGPAGSGKTTTVRLL 315
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG---------S 249
A + + EW P + M Y S +FE F+ R ++G S
Sbjct: 316 ARDMHCEVLEWRNPASSFGAVGMAG------YQSAAAQFEEFLGRGGKFGQLDLEDEEES 369
Query: 250 TSPSI---------PGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRSTH----- 293
P PG ++LI++ P T R T R ++ + +
Sbjct: 370 PLPPASSSATAAAGPGSGSEKKLILIEEFPNTFMRSSTGLIAFRSAVMQYLEANTPPMTS 429
Query: 294 ----------IPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPITNG 339
P +V++E + ++A SF + IL G + NPI
Sbjct: 430 FGFGQPAGPITPIVMVVSET-LLTTTSASADSFTAHRLLGPEILRHPGTGVIEFNPIAPT 488
Query: 340 SIKRTLSKICRQEQYSLSTEQI--DLVAQ--ASGGDIRQAITSLQFSSLKQDPMLNLS-- 393
+ + L + ++E ++ LV Q A GDIR AI+SL+F LK D +
Sbjct: 489 FMTKALELVVQKEARKSGRKRTPGPLVLQRLAEIGDIRNAISSLEFLCLKGDHEADWGSK 548
Query: 394 LSISKP-----NFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
+ S+P + P + R+ TL +FHA+GK ++NKRE
Sbjct: 549 VGFSRPKRGAKDLPALTKGEQESLELVSQREATLGIFHAVGKVVYNKRE 597
>gi|340711171|ref|XP_003394153.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Bombus
terrestris]
Length = 460
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 175/425 (41%), Gaps = 79/425 (18%)
Query: 81 LGSSSRQQLWTNKNKPC-SLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLW 139
+ S+ + W + C S++ K N+ + L S E V+ +D + L+
Sbjct: 1 MASTKKNSSWLMSSFECESVKRTPGIKRNISQVLETSALE--VSSTYDIIPKKKNASSLF 58
Query: 140 A--EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
A E +S EL V R+K +E+ W + ++ K + +L+++G +G GKT +R
Sbjct: 59 ALLEACDAKSPSELVVSRQKQQEILNWLQYKV----RKGTPAILILSGPSGCGKTTALRV 114
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A G + EW TP I E + G D FE F+ R RY S
Sbjct: 115 LAKENGFNITEWITPIDQIMDENNRIMRQG-------DRFEEFLIRATRYSSVL-----S 162
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTAQ 314
+ SS +LL+ D P +E LL R I P V TE G + + +
Sbjct: 163 NYSSRLLLVKDFP----NVFYEEKESFFSLLQRYFEIGKEPIVFVCTEVGNSKLLQTLFS 218
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICR------QEQYSLSTEQIDLVAQAS 368
+I G + +N +T ++K L +I + +S ++D + S
Sbjct: 219 P-----NIREKFGIDLININSVTQTAMKNALKRITKILNSIAGHMLHVSQNKVDEILSNS 273
Query: 369 GGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHAL 428
GDIR A+ +L F SLK PEE+ + R+E L L H +
Sbjct: 274 IGDIRNALLNLIFISLK---------------VPEERENKCN------IREENLGLLHGV 312
Query: 429 GKFLHNKR-ETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENC 487
G+ ++ KR +T+N K D P+++ + QA L+FL EN
Sbjct: 313 GRVINPKRIQTENNWKFVHD-----------------PDEIAAFFQSQATVFLNFLQEN- 354
Query: 488 WLDIM 492
+L+ M
Sbjct: 355 YLNTM 359
>gi|426193223|gb|EKV43157.1| hypothetical protein AGABI2DRAFT_122074 [Agaricus bisporus var.
bisporus H97]
Length = 714
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 155/368 (42%), Gaps = 81/368 (22%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDS-KDKFSTNVLVITGQAGVGKTA 193
+LW + Y+P++ ELAV +KVE+VR WF E G S K + +L +TG +G GKTA
Sbjct: 90 RLWVDIYEPKTEAELAVHVRKVEDVRRWFLEAFDGGPSGKLRRYRRILALTGPSGSGKTA 149
Query: 194 TVRQIASHLGARLYEWDTPT----PTIWQEYMHNCKTGLEYTSKLDEFENFVERI----- 244
TVR +A +G + EW + T + W + +Y S +FE F+ R
Sbjct: 150 TVRLLAREMGFEVLEWKSATGEASSSTWDS---SFDFNGDYESAFSKFETFLNRAMSCRS 206
Query: 245 ---------------RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
+ S +PS P S ++L++DLP ++ L +
Sbjct: 207 VFDIPAATPPVSSTSTQRKSNTPSFP----SKHVILLEDLPNILHPKLQDQFHASLRAFI 262
Query: 290 RSTH-----IPTAV--------------VLTECGKADSVDSTAQSFEEL-------QSIL 323
+ST +P + VLT G A + + + L + +L
Sbjct: 263 KSTSQLSSPVPIVIIMSDATMRGETRDEVLTNGGGAGGYAWSREKNDILDIRTVLPRDLL 322
Query: 324 VDAGARKVALNPITNGSIKRTLSKICRQ------------EQYSLSTEQIDLVAQASGGD 371
+ ++A NPI +K+ L+ + + + + + E ID + ++S GD
Sbjct: 323 MGPYVTQIAFNPIAPTLMKKALTALIDRHFSQRSSSSSHSDIVTPTKEIIDAIVESSNGD 382
Query: 372 IRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKF 431
IR AI +LQF+S+ E R+ +L+LFH +G+
Sbjct: 383 IRSAIMALQFNSVASKKSKKGKKRGVGSTQVMEAVT---------RRESSLALFHLIGRV 433
Query: 432 LHNKRETD 439
L+NKR+ D
Sbjct: 434 LYNKRKGD 441
>gi|425773197|gb|EKV11565.1| Cell cycle checkpoint protein Rad17, putative [Penicillium
digitatum PHI26]
gi|425776601|gb|EKV14815.1| Cell cycle checkpoint protein Rad17, putative [Penicillium
digitatum Pd1]
Length = 834
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 152/358 (42%), Gaps = 56/358 (15%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA+++ P +L ELAV +KKV +V+ W E+ + + +LV+ G AG GKT TV +
Sbjct: 208 WAQRFAPANLSELAVHKKKVSDVQHWLEDAFAGRRFE---RLLVLRGPAGSGKTTTVSLL 264
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST-------- 250
+ +G + EW P + + + +Y FE F+ R ++G
Sbjct: 265 SESMGYDIVEWKNPPASQFGAH--------DYQPMSAHFEEFLGRGDKFGGLDLENASEF 316
Query: 251 SPSIPGESKSSAILLIDDLPVTNGR-----TAFERLRQCLLLLVRSTHI---------PT 296
P + + ILLI++ P GR TAF Q L + H P
Sbjct: 317 DPQQDKKPRDHRILLIEEFPTVIGRASSTLTAFRASLQRYLAASANDHARGSYGMHHPPV 376
Query: 297 AVVLTEC--GKADSVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKIC-RQE 352
++++E G A S+ L +I G + N I + + L I R+
Sbjct: 377 VIIVSETLLGSASSISDNLTVHRLLGPTIYNHPGTTILDFNSIAPTFMHKALRSILDREA 436
Query: 353 QYSLSTE-----QIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
Q S ID ++ GDIR AI+SL+F LK D S++K +K
Sbjct: 437 QNSRRVHIPGPGVIDSISDI--GDIRSAISSLEFICLKGDDTGRWGGSVAK----TKKGR 490
Query: 408 GH--------GGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSR 457
G + R+ +L +FHA+GK ++NKR +L++ D + ++ R
Sbjct: 491 GEVRLTAMEKESLKMITQREASLGMFHAVGKIVYNKRMDPSLIEGDAEILPPPPEYLR 548
>gi|452001802|gb|EMD94261.1| hypothetical protein COCHEDRAFT_1192389 [Cochliobolus
heterostrophus C5]
Length = 909
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 147/345 (42%), Gaps = 63/345 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EK+ P SL+ELAV +KKV VR W + L K +L++ G AG GKT T+ +
Sbjct: 226 WTEKFGPVSLDELAVHKKKVAHVRTWLTDVLAGKSRK---RLLLLKGPAGSGKTTTMALL 282
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS--------- 249
+ L ++EW PT + T S +FE+FV R +GS
Sbjct: 283 SKELDIDMHEWKNPTGAM--------STSDSLVSITAQFEDFVARTGTFGSLTFDTQVSA 334
Query: 250 --TSPSIPGESKSSAILLIDDLPVTNGRT--AFERLRQCLL-LLVRSTHIPTAVVLTECG 304
T+ + ++L+++ P T RT A + R +L L +T TA ++
Sbjct: 335 TQTASPATQTGRKQQLVLVEEFPNTFTRTSSAVQSFRSSVLKYLAANTQSATAFFSSQAD 394
Query: 305 KADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPITNGSIKRTL 345
SV + A SF + IL G V NPI + + L
Sbjct: 395 PTHSVTPIVMIISETLLSTNTAAADSFTAHRLLGPEILTHPGVSVVEFNPIAPTYMTKAL 454
Query: 346 SKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKP 399
I +E + +LS + I +A+ GDIR AI+SL+F L+ D +
Sbjct: 455 DTIILKEATRSGRKKTLSPQAIQRLAEL--GDIRSAISSLEFLCLRGDDAEGWGAKV--- 509
Query: 400 NFPEEKADG--------HGGFSIQFGRDETLSLFHALGKFLHNKR 436
NF ++K + R+ TL +FH++GK ++NKR
Sbjct: 510 NFTKKKTVKDTTMTKTEQESLEMVTQRESTLGIFHSVGKVVYNKR 554
>gi|296805840|ref|XP_002843744.1| cell cycle checkpoint protein rad17 [Arthroderma otae CBS 113480]
gi|238845046|gb|EEQ34708.1| cell cycle checkpoint protein rad17 [Arthroderma otae CBS 113480]
Length = 873
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 161/352 (45%), Gaps = 55/352 (15%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
S A ++ ++ WAE++ P +L+ELAV ++KV +V+ W E + + ++LV+ G A
Sbjct: 217 STPAQTTARRPWAEQFAPVNLDELAVHKRKVSDVQNWLNEVFAG---RSTRHILVLKGPA 273
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G GKT TV ++ LG + EW P T EY EY S +F++F+ R +Y
Sbjct: 274 GSGKTTTVSLLSKVLGYDIVEWRNPART---EYPTQ-----EYASTWTQFDDFLGRCEKY 325
Query: 248 GSTSPSIPGESKSSA-------------ILLIDDLP--VTNG-------RTAFERLRQCL 285
+ GE SSA ++L+++ P ++ G R+A +R
Sbjct: 326 NCLD--LDGEPPSSAFNNSTAVQSSRRRVILVEEFPPSLSPGSSGLIAFRSALQRHAASA 383
Query: 286 LLLVRS-------THIPTAVVLTEC--GKADSVDSTAQSFEELQSILVD-AGARKVALNP 335
L V + + P ++++E G S+ + L L + G + NP
Sbjct: 384 LPSVATRTASGSNSTTPVIIIVSEALLGDGASLSDHFTAHRLLGPELSNHPGISIIEFNP 443
Query: 336 ITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLN 391
I + + L + ++E ++I L A GD+R AI+SL+F L+
Sbjct: 444 IAPTFLTKALDLVLKKEARLSQRKRIPGPGVLKRFAEMGDVRSAISSLEFICLRGGDYEG 503
Query: 392 LSLSI-SKPNFPEEKADGHGGFSIQF-----GRDETLSLFHALGKFLHNKRE 437
S ++ S+P + A I+ R+ +L +FHA+GK ++NKR+
Sbjct: 504 YSGTVNSRPKRSGQTAVPPTAMEIETLEMVTQREASLGIFHAVGKIMYNKRD 555
>gi|71006172|ref|XP_757752.1| hypothetical protein UM01605.1 [Ustilago maydis 521]
gi|46097125|gb|EAK82358.1| hypothetical protein UM01605.1 [Ustilago maydis 521]
Length = 789
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 161/357 (45%), Gaps = 53/357 (14%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS-TNVLV 182
P+H S + + LW+E+ P S++ELA+ KKV +VR W +E + VL
Sbjct: 106 PNHPSQPDHADS--LWSERLAPLSIQELAIHPKKVAQVRTWLQESFSSTPALVKHRKVLA 163
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEW---------DTPTPTIWQEYMHNCKTGLEY-TS 232
+TG AG GK+ATVR +A+ L + EW + P P+ + + ++ T
Sbjct: 164 LTGPAGAGKSATVRALATDLDFDILEWHNDQPSFDANAPGPSFIERFTDFLSKAAKFPTL 223
Query: 233 KLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFE--------RLRQC 284
K E E+ + + S+S + S +L++DLP + E ++Q
Sbjct: 224 KFHEHEHEQKHEQEGESSSITCDAASNRRRAILLEDLPNLHHLPTKELFQTSLQYHIQQS 283
Query: 285 LLLLVRS-THIPTAVVLTECGKAD-----SVDSTAQSFEELQSILVDAGA---------- 328
+ L R ++P +++TE + + DST E L +I+ A
Sbjct: 284 IALTSRGFANVPVILIVTESTPREDQDRWAGDSTTTWRERLATIVDTRTALGQTIRQHPS 343
Query: 329 -RKVALNPITNGSIKRTLSKIC-----RQEQYSLSTEQIDLVAQASGGDIRQAITSLQFS 382
++ NP+ + + L + R ++ L E + VA+ S GD+R A+ LQF
Sbjct: 344 YTEMRFNPVAPTIVLKGLKRAMELTAGRNDKAWL--ELLHAVAEDSNGDLRAAVNCLQFL 401
Query: 383 SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETD 439
K L++ + N +K + GR+ +L+LFHALGK L+NKRE D
Sbjct: 402 GAKH---LDIKM-----NGSAKKRTMTKLIRMVSGRESSLALFHALGKVLYNKREGD 450
>gi|402087131|gb|EJT82029.1| hypothetical protein GGTG_02003 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 984
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 164/363 (45%), Gaps = 64/363 (17%)
Query: 128 SASASSSTQQL--WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITG 185
SA +S+ + L W+E++ P +LEELAV +KKV +VR W E + + +LV+ G
Sbjct: 235 SAVGNSTGEDLRPWSERFGPANLEELAVHKKKVADVRRWLENVM---DGRMRQRLLVLKG 291
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
AG GKT TV+ +A L + EW PT + G Y S +FE F+ R
Sbjct: 292 AAGSGKTTTVQFLAKELRCEVLEWRNPTSSY-------GAPGQRYQSAAAQFEEFMGRGG 344
Query: 246 RYG-------STSPS-IP----GESKSSA--------ILLIDDLPVTNGR--TAFERLRQ 283
R+G SP+ +P G S S + ++L+++ P T R +A R
Sbjct: 345 RFGQLDLEDDDGSPAPLPRRPAGGSASDSQTDAHTRRLMLVEEFPNTFMRSSSALTSFRS 404
Query: 284 CLLL--------LVRSTH-------IPTAVVLTECGKADSVDSTAQSFEELQ----SILV 324
+L LV H IP +V++E + ++A SF + IL
Sbjct: 405 AVLQFLATNTPSLVTFGHQTQQEPAIPVVMVISET-LLTTTSASADSFTAHRLLGPEILR 463
Query: 325 DAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQ 380
G + N I + + L + ++E + +V + G GDIR AI+SL+
Sbjct: 464 HPGTGIIEFNAIAPTFLLKALELVVQKEARKSGRRRTPGPMVLKKLGEIGDIRNAISSLE 523
Query: 381 FSSLKQDPMLN--LSLSISKPNFPEEKADGHGG----FSIQFGRDETLSLFHALGKFLHN 434
F LK D + ++ +KP +A G + R+ +L +FHA+GK ++N
Sbjct: 524 FLCLKGDTDADWGAKVTFTKPKKGAREAAMTKGERESLELVSQREASLGIFHAVGKVVYN 583
Query: 435 KRE 437
+R+
Sbjct: 584 RRD 586
>gi|350594383|ref|XP_003134068.3| PREDICTED: cell cycle checkpoint protein RAD17-like, partial [Sus
scrofa]
Length = 585
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 165/379 (43%), Gaps = 65/379 (17%)
Query: 150 ELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
ELAV +KK+EEV W + + + + ++L+ITG G GKTAT++ ++ G ++ EW
Sbjct: 2 ELAVHKKKIEEVETWLKVEVLERQPTQGGSILLITGPPGCGKTATIKILSKEHGIQVQEW 61
Query: 210 DTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSA 262
P +Q + + N ++ Y S++ F+ F+ R +Y +
Sbjct: 62 INPVLPEFQKDDFKEIFNPESSFHIFPYQSQIAVFKEFLLRATKYNKLQMLGDDLTTDKK 121
Query: 263 ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
I+L++DLP R L + L V+ P ++++ D+ + +E+Q
Sbjct: 122 IILVEDLPNQFYRDP-HILHEVLRRYVQVGRCPLIFIISDSLSGDN-NHRLLFPKEIQE- 178
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI-------DLVAQASGGDIRQA 375
+ ++ NP+ + + L++I +E + I +L+ Q GDIR A
Sbjct: 179 --ECAISNISFNPVAPTIMMKFLNRIVTKEANKNGGKIIVPDKTSLELLCQGCSGDIRSA 236
Query: 376 ITSLQF----------------SSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFG 417
I SLQF SSLK D L+ S KP+ F ++ G G
Sbjct: 237 INSLQFSSSTGKNNLWPRKKGTSSLKSDAALSKSKRRQKPDRVFENQEVQAIG------G 290
Query: 418 RDETLSLFHALGKFLHNKRET----------DNLVKMDQDAFVVKDKFSRLPLKMDAPEK 467
+D +L LF ALGK L+ KR + +L + ++D ++ PE+
Sbjct: 291 KDVSLFLFRALGKILYCKRASVTELDSPRLPSHLSEYERDTLLIH------------PEE 338
Query: 468 VLSQAHGQARPVLDFLHEN 486
V+ +H +LH+N
Sbjct: 339 VVEMSHMPGDLFNLYLHQN 357
>gi|336375456|gb|EGO03792.1| hypothetical protein SERLA73DRAFT_165385 [Serpula lacrymans var.
lacrymans S7.3]
Length = 671
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 159/354 (44%), Gaps = 65/354 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDS-KDKFSTNVLVITGQAGVGKTA 193
+LW + Y+P + +LAV ++KVE+VR WF E G S K K +L +TG AG KT
Sbjct: 60 RLWVDMYEPTTEADLAVHKRKVEDVRRWFIEAFEGGPSGKLKKYRRILALTGPAGTAKTT 119
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS--TS 251
TVR ++ LG + EW ++ EY ++ ++ + D+F+ F+ER + +S
Sbjct: 120 TVRVLSRELGFEILEWRN---SMNDEYGER-RSPVDNQTLFDKFQAFLERASACHNIFSS 175
Query: 252 PSIPGESKSSA-------------------------ILLIDDLPVTNGRTAFERLRQCLL 286
I + S+ I+L++DLP R R L
Sbjct: 176 QMIKNQEPQSSQTGTPACSGSSQSQSQSKKSSGPRHIILLEDLPNILHLPTQARFRAALQ 235
Query: 287 LLVRST---HIPTAVVLTECG-KADSVDSTAQSFEELQSILVDAGARKV---ALNPITNG 339
LV + P +++++ G + ++ D A + +VD R V A NP+ +
Sbjct: 236 SLVDNPPRDAAPIVIIVSDAGMRGEAQDERAANGFGWAKEVVD--VRTVLGPAFNPVAST 293
Query: 340 SIKRTLSKIC--------RQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLN 391
+K+ + + SL E +D++ ++S GDIR AI +LQF+
Sbjct: 294 LMKKAIQSLITIHFSSSSGHSVQSLPREVLDIIVESSNGDIRSAIMALQFAC-------- 345
Query: 392 LSLSISKPNFPEEKADGHGGFSIQF------GRDETLSLFHALGKFLHNKRETD 439
S S + + DG + + R+++L LFH +GK L+NKR+ D
Sbjct: 346 TSASKAGKGKKRVQNDGRSNVNARLVLEAVTRREQSLVLFHLMGKVLYNKRKGD 399
>gi|336274296|ref|XP_003351902.1| RAD17 protein [Sordaria macrospora k-hell]
gi|380096186|emb|CCC06233.1| putative RAD17 protein [Sordaria macrospora k-hell]
Length = 948
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 79/354 (22%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P +LEELAV ++KV +VR W EE + + +LV+ G AG GKT T++ +
Sbjct: 237 WSERFAPTNLEELAVHKRKVGDVRKWLEEVIA---GRMRQRLLVLKGAAGAGKTTTLKLL 293
Query: 199 ASHLGARLYEWDTPT-----PTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG----- 248
A + + EW P P WQ S +FE F+ R ++G
Sbjct: 294 AEDMRCEVLEWRNPASSYGDPRGWQ-------------SASSQFEEFLGRGGKFGQLDLE 340
Query: 249 ----------STSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRSTHIPT 296
T+ SIP + + ++LI++ P T R TA R +L + + + P+
Sbjct: 341 GGDSPPPAPAPTTSSIPKQGRR--LILIEEFPNTFMRSSTALTNFRNTILEFL-AANTPS 397
Query: 297 AVVLTECGKADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPIT 337
+ + ADS+ ++A SF + IL G + NPI
Sbjct: 398 -LAFGQAAPADSIVPIVMVISETLLTTTSASADSFTAHRLLGPEILRHPGTGVIEFNPIA 456
Query: 338 NGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQFSSLKQDPMLNLS 393
+ + L + R+E LV + G GDIR AI SL+F +K D +
Sbjct: 457 PSLLAKALELVVRKEARRSGRRMTPGPLVLKRLGEIGDIRNAIVSLEFLCVKGDDDADWG 516
Query: 394 LSISKPNFPEEKADGHGGFSIQFG----------RDETLSLFHALGKFLHNKRE 437
SK F + K G ++ G R+ TL +FHA+GK ++NKR+
Sbjct: 517 ---SKIAFTKTK-KGSKDTALTKGEQESLELISQREATLGIFHAVGKVVYNKRD 566
>gi|380013968|ref|XP_003691016.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Apis florea]
Length = 438
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 158/386 (40%), Gaps = 88/386 (22%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
E +P+ EL V R+K +E+ W + ++ K +LV++G +G GKTA +R +A
Sbjct: 39 EACEPQCSTELVVSRQKRQEILDWLQYKVKKGKPA----ILVLSGPSGCGKTAAIRVLAK 94
Query: 201 HLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKS 260
L EW TP + E K G D+FE F+ R RY S + S
Sbjct: 95 ENDFNLIEWITPIDQVMDENNRIMKQG-------DKFEEFLIRATRYNSILNNC-----S 142
Query: 261 SAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTAQSFE 317
S +LL+ D P ++ LL R I P V TE G +
Sbjct: 143 SRLLLVKDFP----NVFYDDKESFFSLLGRYFEIGKEPIVFVSTEAGNS----------- 187
Query: 318 ELQSILVDAGARK------VALNPITNGSIKRTLSKICR------QEQYSLSTEQIDLVA 365
+L IL R+ + +N +T ++K L + +S ++D +
Sbjct: 188 KLLQILFSTNIREKFGIDMININSVTQAAMKNALKRTANILNSIAGHMLHVSQHKVDEIL 247
Query: 366 QASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLF 425
+ GDIR A+ +L F SLK PEE+ + R+ETL L
Sbjct: 248 SNNVGDIRNALLNLIFISLK---------------VPEEQENKCN------IREETLGLL 286
Query: 426 HALGKFLHNKR-ETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLH 484
H +G+ ++ KR +T+N K D P+++++ QA L+FL
Sbjct: 287 HGVGRVINPKRIQTENNWKFVHD-----------------PDEIIAFFQSQATIFLNFLQ 329
Query: 485 E---NCWLDIMRQTMFYNLLRLQLLL 507
E N DI + + N+L L +L
Sbjct: 330 ENYLNTMGDIEKVNICTNILSLANIL 355
>gi|336388510|gb|EGO29654.1| hypothetical protein SERLADRAFT_445435 [Serpula lacrymans var.
lacrymans S7.9]
Length = 662
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 159/354 (44%), Gaps = 65/354 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDS-KDKFSTNVLVITGQAGVGKTA 193
+LW + Y+P + +LAV ++KVE+VR WF E G S K K +L +TG AG KT
Sbjct: 51 RLWVDMYEPTTEADLAVHKRKVEDVRRWFIEAFEGGPSGKLKKYRRILALTGPAGTAKTT 110
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS--TS 251
TVR ++ LG + EW ++ EY ++ ++ + D+F+ F+ER + +S
Sbjct: 111 TVRVLSRELGFEILEWRN---SMNDEYGER-RSPVDNQTLFDKFQAFLERASACHNIFSS 166
Query: 252 PSIPGESKSSA-------------------------ILLIDDLPVTNGRTAFERLRQCLL 286
I + S+ I+L++DLP R R L
Sbjct: 167 QMIKNQEPQSSQTGTPACSGSSQSQSQSKKSSGPRHIILLEDLPNILHLPTQARFRAALQ 226
Query: 287 LLVRST---HIPTAVVLTECG-KADSVDSTAQSFEELQSILVDAGARKV---ALNPITNG 339
LV + P +++++ G + ++ D A + +VD R V A NP+ +
Sbjct: 227 SLVDNPPRDAAPIVIIVSDAGMRGEAQDERAANGFGWAKEVVD--VRTVLGPAFNPVAST 284
Query: 340 SIKRTLSKIC--------RQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLN 391
+K+ + + SL E +D++ ++S GDIR AI +LQF+
Sbjct: 285 LMKKAIQSLITIHFSSSSGHSVQSLPREVLDIIVESSNGDIRSAIMALQFAC-------- 336
Query: 392 LSLSISKPNFPEEKADGHGGFSIQF------GRDETLSLFHALGKFLHNKRETD 439
S S + + DG + + R+++L LFH +GK L+NKR+ D
Sbjct: 337 TSASKAGKGKKRVQNDGRSNVNARLVLEAVTRREQSLVLFHLMGKVLYNKRKGD 390
>gi|391333911|ref|XP_003741353.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Metaseiulus
occidentalis]
Length = 436
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 159/357 (44%), Gaps = 42/357 (11%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSK-DKFSTNVLVITGQAGVGK 191
+S Q W +++ P+S E+LAV +KK+EEV +WF L K +K +L++ G G GK
Sbjct: 21 NSEAQSWIDRFAPQSKEKLAVHKKKIEEVESWFARNLISKKFEKGKAPILLLVGPTGSGK 80
Query: 192 TATVRQIASHLGARLYEW--------DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
T ++R +A L + EW +T + W+E + S ++ F +F+ +
Sbjct: 81 TTSLRVVAQDLDIHIKEWLHPITQESNTAQGSAWRE---GGQQDYPKESVVEHFMDFIFQ 137
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC 303
RY S ++ S I+L++++P R E + L P ++L E
Sbjct: 138 GSRYNSLF-----DNDSQRIILLEEIPSIFLRKP-EEFHEALRRYQAFGRCPLVIILCET 191
Query: 304 GKADSVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTL-------SKICRQEQYS 355
S+++ F+ I + ++ NPI N + + + SK+C +
Sbjct: 192 -------SSSREFKLFPPEIKRELQIHTISFNPIANTLLHKAIRDIIIEASKVCGKNFTH 244
Query: 356 LSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPML-NLSLSISKPNFPEEKADGHGGFSI 414
++ V Q+ GD+R A+ L+ + + L N K + G
Sbjct: 245 PMDSVVESVVQSCQGDLRLAVNLLEMNCMGTAKKLANFEKKKPKATKKSDSKAATTGIG- 303
Query: 415 QFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
+D +L LFH+LGK L++KRE + ++ Q + + R P K + PE+V +
Sbjct: 304 --AKDSSLYLFHSLGKILYSKREDKIIHELPQHLKL----YERPPTK-EVPEEVFER 353
>gi|452848356|gb|EME50288.1| hypothetical protein DOTSEDRAFT_68977 [Dothistroma septosporum
NZE10]
Length = 848
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 168/399 (42%), Gaps = 72/399 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E++ P L ELAV R+KV++VR W E L ++K VLV+ G AG GKT T R +
Sbjct: 197 WTEQFAPIDLSELAVHRRKVDDVRKWLEMALRGRRNK----VLVLKGPAGAGKTTTFRLL 252
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-----SKLDEFENFVERIRR------- 246
A + EW+ P +G +Y+ S +FE FV R+ +
Sbjct: 253 AQDMKVASIEWNDP-------------SGADYSPEGALSSAAQFEEFVSRVGKSSGLLLS 299
Query: 247 ----------YGSTSPSIPGESKSSAILLIDDLPVTNGRTAF------ERLRQCLLLLVR 290
Y S S + P E + LL+++ P T R + + Q + V
Sbjct: 300 SGSNQDKQPGYQSASEATPTERLQT--LLVEEFPNTFSRQSATLQSFRSTIAQYVSSFVP 357
Query: 291 STHIPTAVVL--------TECGKADSVDSTAQSFEELQSILVDA-GARKVALNPITNGSI 341
+ IPT +++ T ADS TA L L+D+ V NP+ +
Sbjct: 358 ADSIPTPLIMVISETLLSTNTAAADSF--TAHRL--LGPELIDSPNVNIVEFNPVAPTFL 413
Query: 342 KRTLSKI----CRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD------PMLN 391
+ L I R+ + + L A GDIR AI+SL+F ++ D ++
Sbjct: 414 IKALEVIVVKEARKSGRRRTPGPLVLKRLAETGDIRSAISSLEFLCIRGDQGDLWSSKVS 473
Query: 392 LSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR-ETDNLVKMDQDAFV 450
+ + N P + R+ +L +FH++GK ++NKR + + V + Q
Sbjct: 474 FTKTSKSKNVPLLTKAEEEALKLVTNRESSLGMFHSVGKVVYNKRIDVPSSVALSQPPPW 533
Query: 451 VKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWL 489
+ ++ R + + P+ ++ + L LHEN L
Sbjct: 534 LS-QYRRSKVPENDPDILMDELGTDTSTFLAALHENYAL 571
>gi|395825668|ref|XP_003786045.1| PREDICTED: cell cycle checkpoint protein RAD17 [Otolemur garnettii]
Length = 656
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 200/506 (39%), Gaps = 94/506 (18%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P LE G+ + + L N + S + W +KYKP + ELA
Sbjct: 50 KNVPFPLESSRFPAGKKGKLSSVEQIYSLEN-----SKEYLSENEPWVDKYKPETQHELA 104
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V +KK+EEV W + ++ + + K ++L+ITG G GKT TV+ ++ G ++ EW P
Sbjct: 105 VHKKKIEEVETWLKAQVLERQTKQGGSILLITGPPGCGKTTTVKILSKEHGIQVQEWINP 164
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + M N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 165 VLPDFQKDDFKEMFNPESSFHAFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 224
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L V+ P ++++ D+ Q + I +
Sbjct: 225 VEDLPNQFYRDSC-ILHEVLRKYVQIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 279
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQ---------YSLSTEQIDLVAQASGGDIRQAI 376
++ NP+ + + L++I E S+S + +L + G
Sbjct: 280 CSISNISFNPVAPTIMMKFLNRIVTIEANKFNLFIWLASVSQRENNLWPKKKG------- 332
Query: 377 TSLQFSSLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
S K D L+ S KP+ F ++ G G+D +L LF ALGK L+
Sbjct: 333 -----VSFKSDAALSKSKRRKKPDTVFENQEVQAIG------GKDVSLFLFRALGKILYC 381
Query: 435 KRET----------DNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLH 484
KR + +L + ++D +++ PE+V+ +H +LH
Sbjct: 382 KRASLTELGSPQLPSHLSEYERDTLLIQ------------PEEVVEMSHMPGELFNLYLH 429
Query: 485 ENC------WLDIMRQTMFYNLL-------RLQLLLVEYYLEI-------------LIQC 518
+N DI+R + F + + LL EY I C
Sbjct: 430 QNYVDFFMDIDDIVRASEFLSFADTLSGEWNTRSLLREYSTSIATRGVIHSNKARGFAHC 489
Query: 519 LLGGMLFVSQSSGEWTNLLCKKRRSC 544
+GG F +W + K R +C
Sbjct: 490 QVGGSSFRPLHKPQWFLINKKYRENC 515
>gi|393222242|gb|EJD07726.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 679
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 162/367 (44%), Gaps = 70/367 (19%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFST--NVLVIT 184
S++ S +LW + Y+P+S ELAV +KKVE+VR W +E G + K +LV+T
Sbjct: 79 SSTDSQHDDRLWIDVYEPQSEAELAVHKKKVEDVRRWLQEAFEGGNMGKLKKYRRILVLT 138
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER- 243
G AG KT TVR ++ LG + EW + T+ + Y+ N ++ ++FE F+ R
Sbjct: 139 GPAGTAKTTTVRVLSKELGFNILEWRS---TVEESYVEN---DTDWEGLNEKFEAFLARA 192
Query: 244 ------IRRYGSTSPS------------------IPGESKSSAILLIDDLPVT---NGRT 276
+ R G S IP E K ++L++DLP +
Sbjct: 193 AANRPLVGRLGQLPSSSSQTCLPSSSSTPSTSSPIPNEQKQ--VILLEDLPNVLHQPTQV 250
Query: 277 AFERLRQCLLLLVRSTHIPTAVVLTECGKADSV--DSTAQSFE--------ELQSILVDA 326
F + + L ST P +V+++ V + AQ +++++L +
Sbjct: 251 KFHAALESFVTLPNST--PLIIVISDASTRGEVRDERLAQGGGGRFLHDNVDIRTVLPPS 308
Query: 327 -----GARKVALNPITNGSIKRTLSKICRQ------EQYSLSTEQIDLVAQASGGDIRQA 375
+++ NPI + R L ++ + + L+ + ++ + Q S GDIR A
Sbjct: 309 LVNGPYVTQISFNPIAPTLMLRALQEMLSRYYSDVPQSIRLTKDDLNTIVQTSNGDIRSA 368
Query: 376 ITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK 435
+LQFS + + + +K + R+ L+LFH +GK L+NK
Sbjct: 369 AMALQFSCVLE--------TSKSKAAKGKKKGSRALMELITRRERALALFHLMGKVLYNK 420
Query: 436 RETDNLV 442
R+ D L
Sbjct: 421 RKGDPLA 427
>gi|116192441|ref|XP_001222033.1| hypothetical protein CHGG_05938 [Chaetomium globosum CBS 148.51]
gi|88181851|gb|EAQ89319.1| hypothetical protein CHGG_05938 [Chaetomium globosum CBS 148.51]
Length = 945
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 167/387 (43%), Gaps = 81/387 (20%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RFL PS+ P +D + + W+E++ P +L+ELAV ++KV++VR W +E
Sbjct: 247 RFLRPSKSSTPKTPSNDDDA------RPWSERFAPVNLDELAVHKRKVQDVRKWLDEVFA 300
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ +LV+ G AG GKT T+R +A + + EW P + G Y
Sbjct: 301 ---GRMRQRLLVLKGAAGSGKTTTLRLLARDMRCEVLEWRNPANSF-------GVAGHGY 350
Query: 231 TSKLDEFENFVERIRRY--------GSTSPSIPGESKSSA------------ILLIDDLP 270
S +FE F+ R ++ G T P +P +SA ++L+++ P
Sbjct: 351 QSAAAQFEEFLGRGGKFGQLDVESDGGTPPPVPPPPPASANGNGVPKGTERRLILVEEFP 410
Query: 271 VT-----NGRTAFERLRQCLLLLVRSTH---------------IPTAVVLTECGKADSVD 310
T +G T F R +L + + P +V++E +
Sbjct: 411 NTFMRSSSGLTGF---RNAILQFLAANTPALGGFAFGSNSEAITPIVMVISET-LLTTTS 466
Query: 311 STAQSFEELQ----SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLV 364
++A SF + IL G + NP+ + + L + ++E + LV
Sbjct: 467 ASADSFTAHRLLGPEILKHPGTGVIEFNPVAATFLTKALELVVQKEARKSGRRRTPGPLV 526
Query: 365 AQASG--GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----- 417
Q G GDIR AI+SL+F +K D + SK F + K G ++ G
Sbjct: 527 LQRLGEIGDIRNAISSLEFFCVKGDDEADWG---SKVAFTKPKRGAKGVPALTQGEQDTL 583
Query: 418 -----RDETLSLFHALGKFLHNKRETD 439
R+ TL +FHA+GK ++NKR ++
Sbjct: 584 ELVSQREATLGIFHAVGKVVYNKRGSE 610
>gi|119484048|ref|XP_001261927.1| cell cycle checkpoint protein rad17 [Neosartorya fischeri NRRL 181]
gi|119410083|gb|EAW20030.1| cell cycle checkpoint protein rad17 [Neosartorya fischeri NRRL 181]
Length = 858
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 152/352 (43%), Gaps = 70/352 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA+KY P +L ELAV +KK+ +V++W L D+ F +LV+ G AG GKT T+ +
Sbjct: 235 WAQKYSPVNLNELAVHKKKIADVQSW----LSDALRAFEKKLLVLRGPAGSGKTTTLSLL 290
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR------YGSTSP 252
+ LG + EW P+ + + +TS +FE F+ R R YG+T
Sbjct: 291 SDKLGFDVLEWRNPSGSEF--------AAKGFTSTTAQFEEFLTRGNRLRGLEFYGTTGL 342
Query: 253 SIPGESKSSA----ILLIDDLP-VTNGR----TAFERLRQCLLLLV------------RS 291
S + S ++LI++ P V +G TAF Q L + R
Sbjct: 343 SASKSNSSDHMRPRVILIEEFPTVFDGDSPSLTAFRLSLQRYLSVSPSPRSNTRDDIERH 402
Query: 292 THIPTAVVLTEC----GKADSVDSTAQSFEELQSILVDAGARKVALNPITNG----SIKR 343
P ++++E G + S + TA IL G V N I ++
Sbjct: 403 GSSPVVIIVSETMLNTGASYSDNLTAHRLLG-PDILSHPGTTIVDFNAIAPTFMFKALDL 461
Query: 344 TLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
L K R+ + + L + + GDIR AI+SL+F L+ + K FP
Sbjct: 462 VLEKHIRRYRSAKRPGPAMLKSLSEVGDIRSAISSLEFLCLRCE-------RFEKYPFPN 514
Query: 404 EKADGHGGFSIQ----------FGRDETLSLFHALGKFLHNKRE-----TDN 440
G G S+ R+ +L LFHA+GK ++NKRE TDN
Sbjct: 515 ATRTGRGNISLAPVEKEALQTITYRESSLGLFHAVGKIVYNKREDLSSTTDN 566
>gi|440635575|gb|ELR05494.1| hypothetical protein GMDG_07416 [Geomyces destructans 20631-21]
Length = 893
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 150/346 (43%), Gaps = 57/346 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA+++ P L+ELAV +KKV +VR W E + + K +L++ G AG GKT TV+ +
Sbjct: 218 WADRFAPMDLDELAVHKKKVSDVRGWLEAVM---EGKLRQRLLILKGAAGTGKTTTVQLL 274
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG---------S 249
A +GA + EW P ++ + + S +FE F+ R ++G
Sbjct: 275 AKSMGAEILEWRNPAGSMASDD--------GFVSMAAQFEEFMGRGGKFGQLDIFSEDEP 326
Query: 250 TSPSIPGE---SKSSAILLIDDLP--VTNGRTAFERLRQCLL------------------ 286
TSPS G ++ I+LI++ P +T TA + R LL
Sbjct: 327 TSPSTSGVKPLNRRKNIILIEEFPNTITRASTALQNFRSTLLQYLAANTPSLAETYTRPN 386
Query: 287 -LLVRSTHIPTAVVLTECGKADSVDSTAQSFEEL--QSILVDAGARKVALNP----ITNG 339
++ IP +V+TE + + + L IL + NP +
Sbjct: 387 TATAKAPIIPLIMVITETLLTTTATTDNFTSHRLLGPEILHHPAVATIEFNPAAPTLLAK 446
Query: 340 SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDP-----MLNLSL 394
++ T+ K R + + L A GD+R A+ SLQF L+ + + S
Sbjct: 447 ALDLTVQKEARASGRRKTAGPLVLKLLAEIGDVRSAVASLQFLCLRGEEGDWGGKVAFSA 506
Query: 395 SISKPNFPEEKADGHGGFSIQF--GRDETLSLFHALGKFLHNKRET 438
K E+ S++ R+ +L +FHA+GK ++NKR+T
Sbjct: 507 KRKKAAGKEQPMTKMEEESLELVTRREASLGIFHAVGKVVYNKRDT 552
>gi|398412033|ref|XP_003857348.1| hypothetical protein MYCGRDRAFT_34521 [Zymoseptoria tritici IPO323]
gi|339477233|gb|EGP92324.1| hypothetical protein MYCGRDRAFT_34521 [Zymoseptoria tritici IPO323]
Length = 696
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 168/395 (42%), Gaps = 72/395 (18%)
Query: 86 RQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKP 145
R Q + N+++P +K G + P G++N D ++ W E++ P
Sbjct: 8 RAQSFGNESQPSLAGSQKFRKAAGGERVPPF---GVLNND----------KRPWTEQFAP 54
Query: 146 RSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGAR 205
L ELAV ++KV +VR W E + K VL++ G AG GKT TV+ +A LG
Sbjct: 55 IDLTELAVHKRKVSDVRTWLEMTFSGRRQK----VLILKGAAGTGKTTTVQLLAKDLGVE 110
Query: 206 LYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS---------------- 249
L W P + E+ + + S FE+FV R + S
Sbjct: 111 LMHWRDPGSS---EHTEDG-----FVSSGCRFEDFVARAGKSSSLMISSDADAVPPADLK 162
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRT-----AFER-LRQCLLLLVRSTHIPTAVVL-- 300
T+ + P ++ A LLI++ P T RT AF + Q + + V S PT +++
Sbjct: 163 PTNTAAPSLNRPRA-LLIEEFPNTFSRTSTPLNAFRSTIAQYVSMTVPSDTKPTPMIMII 221
Query: 301 ------TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
T ADS + EL + + + NP+ + + L I +E
Sbjct: 222 SETLLSTNTAAADSFTAHRLLGPEL---ITNPWINVIEFNPVAPTYLVKALETIVVKEAR 278
Query: 355 SLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSI-------SKPNFPE 403
+ L A GD+R A++SL+F L+ D S + SK + P
Sbjct: 279 KSGRRRTPGPQVLKRLAETGDLRSAVSSLEFLCLRGDDGDTWSSKVTFTKPKQSKAHPPL 338
Query: 404 EKADGHGGFSIQFGRDETLSLFHALGKFLHNKRET 438
KA+ + R+ ++ +FH++GK ++NKR++
Sbjct: 339 TKAE-EDALRLITNRESSIGIFHSVGKVVYNKRKS 372
>gi|156063288|ref|XP_001597566.1| hypothetical protein SS1G_01760 [Sclerotinia sclerotiorum 1980]
gi|154697096|gb|EDN96834.1| hypothetical protein SS1G_01760 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 932
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 152/372 (40%), Gaps = 63/372 (16%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG 170
RF+ PS+ L + + WAE++ P +LEEL V +KKV +VR W E +
Sbjct: 209 RFVKPSQVPSL------ESIVEKEDMRPWAERFGPNNLEELGVHKKKVTDVRTWLENVI- 261
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
+ + +L++ G AG GKT TV+ +A +G + EW P ++ + +
Sbjct: 262 --RGQMRQQLLILKGAAGTGKTTTVQLLAKDMGCDILEWRNPVGSV--------ASSDGF 311
Query: 231 TSKLDEFENFVERIRRYGS------------TSPSIPGESKSSAILLIDDLPVTNGR--T 276
S +FE F+ R ++G P + + I+L+++ P T R +
Sbjct: 312 QSVAAQFEEFMGRGGKFGQLDLFSDDNADILGKPEVKPLDRKKQIILVEEFPNTFTRSSS 371
Query: 277 AFERLRQCLLLLVRSTHIPTAVVLTECGKADSV---------------DSTAQSFEELQ- 320
A + R +L + S P +V K D + ++A SF +
Sbjct: 372 ALQSFRSAILQYLASNTPPLSVPYNPKAKKDHITPVVMIVSETLLTTTSASADSFTAHRL 431
Query: 321 ---SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIR 373
IL G + N I + + L + ++E + L GDIR
Sbjct: 432 LGAEILQHPGVGIIEFNAIAPTILAKALEIVVQKESRKSGRRKTPGPQVLRRLGEVGDIR 491
Query: 374 QAITSLQFSSLKQD-------PMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFH 426
AI SL+F L+ D + SK + + + R+ +L +FH
Sbjct: 492 SAIGSLEFMCLRGDVDDWGGKVVFGKGKKKSKDTLLTKMEE--DSLELITRREASLGIFH 549
Query: 427 ALGKFLHNKRET 438
A+GK ++NKRE+
Sbjct: 550 AVGKVVYNKRES 561
>gi|409077350|gb|EKM77716.1| hypothetical protein AGABI1DRAFT_129999 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 715
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 168/405 (41%), Gaps = 82/405 (20%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDS-KDKFSTNVLVITGQAGVGKTA 193
+LW + Y+P++ ELAV +KVE+VR WF E G S K + +L +TG +G GKTA
Sbjct: 90 RLWVDVYEPKTEAELAVHVRKVEDVRRWFLEAFDGGPSGKLRRYRRILALTGPSGSGKTA 149
Query: 194 TVRQIASHLGARLYEWDTPT----PTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR--- 246
VR +A +G + EW + T + W + +Y S +FE F+ R
Sbjct: 150 AVRLLAREMGFEVLEWKSATGEASSSTWDS---SFDFNGDYESAFSKFETFLNRAMSCRS 206
Query: 247 ----YGSTSPSIPG----------ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRST 292
+ +PS+ S S ++L++DLP ++ L + ST
Sbjct: 207 VFDVPAAATPSMSSTSTQRKSNTPSSASKHVILLEDLPNILHPKIQDQFHASLRAFIEST 266
Query: 293 H-----IPTAVV--------------LTECGKADSVDSTAQSFEEL-------QSILVDA 326
+P ++ LT G A + + + L + +L+
Sbjct: 267 SQLSSPVPIVIIMSDATMRGETRDELLTNGGGAGGYAWSREKNDILDIRTVLPRDLLMGP 326
Query: 327 GARKVALNPITNGSIKRTLSKICRQ------------EQYSLSTEQIDLVAQASGGDIRQ 374
++A NPI +K+ L+ + + + + + E ID + ++S GDIR
Sbjct: 327 YVTQIAFNPIAPTLMKKALTALIDRHFSQRSSSSSHSDIVTPTKEIIDAIVESSNGDIRS 386
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
AI +LQF+S+ E R+ +L+LFH +G+ L+N
Sbjct: 387 AIMALQFNSVASKKSKKGKKHGVGSTQVMEAVT---------RRESSLALFHLIGRVLYN 437
Query: 435 KRETD--------NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
KR+ D +K ++D V SRLP + E+ S+
Sbjct: 438 KRKGDPSSTSASAKDIKREKDLDVKLKDPSRLPPHLKEHERRASR 482
>gi|383852326|ref|XP_003701679.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Megachile
rotundata]
Length = 458
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 167/411 (40%), Gaps = 79/411 (19%)
Query: 98 SLEEHAIQKENVGRFLTPSRFEGLVN--PD-HDSASASSSTQQLWA--EKYKPRSLEELA 152
S E +++K V + + FE ++ P HD +T L A E +PR EL
Sbjct: 13 SFECDSVRKSPVTKRTSSQAFESTMSEIPSIHDIVPKKKNTSSLSALLEACEPRQATELV 72
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
V ++K +E+ W ++ K +V++G +G GKTAT++ +A G + EW TP
Sbjct: 73 VSKRKQQEILDWLHFKVRRDKPY----AMVLSGPSGCGKTATIKVLAKENGFSVTEWITP 128
Query: 213 TPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVT 272
+ E + D FE F+ R RY S + S +LL+ D P
Sbjct: 129 IDQVMDE-------NYRVMRQADRFEEFLIRATRYKSVL-----NNNSRRLLLVKDFP-- 174
Query: 273 NGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTAQSFEELQSILVDAGAR 329
+E L LL R P V TE G + + S ++ G
Sbjct: 175 --NVFYEDSLSFLSLLERYFEYGKEPIVFVCTEVGNSKLLQSLFPP-----NVREKFGID 227
Query: 330 KVALNPITNGSIKRTLSKICR------QEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
+ +NP+T ++K L + + S++ +ID + S GDIR A+ +L F S
Sbjct: 228 LININPVTQAAMKNALKRASNILNSIAKHMLSVTQNKIDEILSNSIGDIRNALLNLIFIS 287
Query: 384 LKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR-ETDNLV 442
L+ PEE + R+ L L H +G+ ++ KR + +N
Sbjct: 288 LR---------------VPEENENSCN------SREVNLGLLHGIGQVINAKRIQEENRW 326
Query: 443 KMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMR 493
K D P+++ + QA L+FL EN +L+ MR
Sbjct: 327 KFVHD-----------------PDEIAAFFQSQATVFLNFLQEN-YLNTMR 359
>gi|296423760|ref|XP_002841421.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637659|emb|CAZ85612.1| unnamed protein product [Tuber melanosporum]
Length = 874
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 153/351 (43%), Gaps = 68/351 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN-VLVITGQAGVGKTATVRQ 197
W E++ P+S LAV +KKV EVR+WFE D FS +LV+ G AG GKTA +
Sbjct: 212 WPERFAPQSSNLLAVNQKKVAEVRSWFEHVF----DGFSKQRLLVLKGSAGSGKTAVLEV 267
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE-FENFVERIRRYG-----STS 251
++ +G + EW P+ I E G ++S L FE FV R R+G ST+
Sbjct: 268 LSKEMGFEVLEWKNPSGVIPTE---GPDEGNAFSSGLTGVFEEFVGRAGRFGSLNMVSTA 324
Query: 252 PS---------IPG-------ESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRST 292
PS + G ESK ++LI+D P T+ R + +
Sbjct: 325 PSRNNAGGKKPVSGGPLSETDESKKK-VILIEDFPNALFTSSPAPLASFRHTIKSFL--- 380
Query: 293 HIPT---------AVVLTECGKADSVDSTAQSFEELQS--ILVDAGARKVALNPITNGSI 341
+PT +VL A+ S A + L S IL A + N I +
Sbjct: 381 ALPTPPRFSPPVPPLVLIISESANISGSGAFTAHRLLSPEILHHPLATSITFNKIAPTFM 440
Query: 342 KRTLSKICRQEQYSLS----TEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSIS 397
+ LS I QE S L A +S GDIR AI L+F ++ + + S
Sbjct: 441 IKALSAIITQESRESSRRFGPSNPVLQALSSSGDIRSAIMGLEFLAVNGE---GGAFS-E 496
Query: 398 KPNFPE----EKADGHGG--------FSIQFGRDETLSLFHALGKFLHNKR 436
K +F E KA G GG + R+ +L LFHA+G+ ++NKR
Sbjct: 497 KVDFNERAKRRKASGEGGLNEVEREILNTVTQRESSLGLFHAVGRVVYNKR 547
>gi|367042786|ref|XP_003651773.1| hypothetical protein THITE_2112421 [Thielavia terrestris NRRL 8126]
gi|346999035|gb|AEO65437.1| hypothetical protein THITE_2112421 [Thielavia terrestris NRRL 8126]
Length = 1004
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 172/408 (42%), Gaps = 71/408 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P SL+ELAV ++KV++V+ W +E + +LV+ G AG GKT T+R +
Sbjct: 272 WSERFAPVSLDELAVHKRKVQDVKRWLDEVFA---GRMRQRLLVLKGPAGSGKTTTLRLL 328
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG---------- 248
A + + EW P + G Y S +FE F+ R ++G
Sbjct: 329 ARDMRCEVLEWRNPANSF-------GVAGQGYQSAAAQFEEFLGRGGKFGQLDFESDEAT 381
Query: 249 -------STSPSIPGESKSSA--ILLIDDLPVTNGR--TAFERLRQCLLLLVRSTHIPTA 297
++ S G + ++ ++L+++ P T R T R +L + + + P
Sbjct: 382 PPPMPPPPSAASRNGADRGASRRLILVEEFPNTFMRSSTGLTGFRNAILQFL-AANTPAL 440
Query: 298 VVLTECGKADSV---------------DSTAQSFEELQ----SILVDAGARKVALNPITN 338
AD + ++A SF + IL G + NPI
Sbjct: 441 AAFGLSSTADPITPVVMVVSETLLTTTSASADSFTAHRLLGPEILRHPGTGVIEFNPIAP 500
Query: 339 GSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--GDIRQAITSLQFSSLKQDPMLNLSL 394
+ + L + ++E + LV Q G GDIR AI+SL+F +K D +
Sbjct: 501 TFLTKALELVVQKEARKSGRRRTPGPLVLQRLGEIGDIRSAISSLEFLCVKGDDEADWG- 559
Query: 395 SISKPNFPEEKADGHGGFSIQFG----------RDETLSLFHALGKFLHNKRETDNLVKM 444
SK F + K G ++ G R+ TL +FHA+GK ++NKR +
Sbjct: 560 --SKVAFTKPKRGSKGVPALTKGEQESLELVSQREATLGIFHAVGKVVYNKRGDFPAGSV 617
Query: 445 DQDAFVVKDKFSRL--PLKMD-APEKVLSQAHGQARPVLDFLHENCWL 489
+ A ++ D + L P + + A + ++ + + LHEN L
Sbjct: 618 EAAAEMLPDYMAHLARPKRSEVAVDSLIDEIGTDTHTFISALHENYVL 665
>gi|410076218|ref|XP_003955691.1| hypothetical protein KAFR_0B02590 [Kazachstania africana CBS 2517]
gi|372462274|emb|CCF56556.1| hypothetical protein KAFR_0B02590 [Kazachstania africana CBS 2517]
Length = 662
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 166/351 (47%), Gaps = 72/351 (20%)
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITG 185
H S S + + W EK PR LE++A+ ++K+++VR + L KD S +L++TG
Sbjct: 57 HSSDSDTMIGKGSWYEKICPRCLEDVAIHKRKLDDVRQKLIQML---KDPESCRILLLTG 113
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTG----LEY-----TSKLDE 236
+G K+ ++Q LG L ++ Y N K G +EY ++L +
Sbjct: 114 PSGTSKSTLIKQ----LGRILVPMYKNNNRLYGIYGSNEKDGEGVVVEYCNDLVINELSQ 169
Query: 237 FENFVERIRRYGSTSPSIPGESKSSAILLIDDLP--VTNG-RTAFERLRQCLLLLVRST- 292
+NF E + S S G + S I+L++D P +G R AF+ Q LL + ST
Sbjct: 170 VKNFQE----FLSQSKYRVGSNLS--IILVEDFPNLFHDGTRVAFQ---QALLEWLYSTE 220
Query: 293 -HIPTAVVLTECGKADSVDSTAQSFEELQS-----------ILVDAGARKVALNPITNGS 340
+P V+ + +S DST +++ + + IL +++ NPI N
Sbjct: 221 EQLPPLVISLTESEIESSDSTDKNYLNIDTMFTAETLLGREILNHPKLQRIKFNPINNTL 280
Query: 341 IKRTLSKICRQEQYSLS-----TEQIDLVAQ--ASGGDIRQAITSLQFSSLKQDPMLNLS 393
+K+TLSKIC QEQ L T++ ++ + +S GDIR AI++L+F ++ + + L+
Sbjct: 281 LKKTLSKICIQEQNLLKLNDKWTQRTEITKEIASSTGDIRSAISALEFWAMTKSNIGILT 340
Query: 394 LSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKM 444
R E +S FHA+GK +H + ++ +M
Sbjct: 341 ------------------------RKEPVSFFHAVGKVIHGSHDIEDDNEM 367
>gi|393233167|gb|EJD40741.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 643
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 165/374 (44%), Gaps = 47/374 (12%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
SS+ LW + + P + ++L V +KK+E +R W E L K+ +L +TG AG GK
Sbjct: 86 SSANDSLWVDVHYPLTEDDLVVHKKKLETIRQWMCEALDGKLSKYR-RILALTGPAGAGK 144
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG--- 248
TA + +A L E W M + L+ + +F+NF+ R Y
Sbjct: 145 TAAIHVLARELDFEAVE--------WSNSMDDADDDLDRETLSRKFQNFLSRAASYRPLL 196
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVR---STHIPTAVVLTECG- 304
STS + P K I+L +DLP + LL + P +++++ G
Sbjct: 197 STSAAGPSARKRRVIVL-EDLPNILHPVVLQSFHAALLSFTEQPPAETCPLVLIVSDAGL 255
Query: 305 KADSVDSTAQSFEEL-------QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-- 355
+A+ D + Q +L +VA NP+ +++ L + +E+
Sbjct: 256 RAEDHDDRHARDAAINIRTVLPQQLLNSPYVTQVAFNPVAPTRLRKALQVVLAKEEPQRK 315
Query: 356 --LSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFS 413
+ E +D + S GD+R AI +LQF+ ++++ + +K D +
Sbjct: 316 GIAAAELLDAIVAGSNGDVRAAIMALQFAC-----VVDVKGAKAKGKKAARPKDILEAVT 370
Query: 414 IQFGRDETLSLFHALGKFLHNKRETD----NLVKMDQDAFVVKDKFSRLPLKMDAPE--K 467
R+ +L+LFH LGK L+NKR+ D +L D D DK R+P D P+ +
Sbjct: 371 ---KRECSLALFHLLGKLLYNKRKGDPPGASLSAKDADREREADK--RIP---DPPKLPR 422
Query: 468 VLSQAHGQARPVLD 481
L Q H +A +D
Sbjct: 423 HLRQEHHRAASRVD 436
>gi|328789952|ref|XP_001120448.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Apis
mellifera]
Length = 464
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 159/387 (41%), Gaps = 90/387 (23%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
E +PR EL V R+K +E+ W + ++ K +LV++G +G GKTA +R +A
Sbjct: 61 EACEPRCSTELVVSRQKRQEILDWLQYKVKKGKPA----ILVLSGPSGCGKTAAIRVLAK 116
Query: 201 HLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKS 260
L EW TP + E K G D+FE F+ R RY S + S
Sbjct: 117 ENDFNLTEWITPIDQVVDENNRIMKQG-------DKFEEFLIRATRYNSIL-----NNCS 164
Query: 261 SAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTAQSFE 317
+ +LL+ D P ++ LL + I P V TE G +
Sbjct: 165 NRLLLVKDFP----NVFYDDKESFFSLLGKYFEIGKEPIVFVCTEAGNS----------- 209
Query: 318 ELQSILVDAGARK------VALNPITNGSIKRTLSKICR------QEQYSLSTEQIDLVA 365
+L IL R+ + +N +T ++K L + +S ++D +
Sbjct: 210 KLLQILFSTNIREKFGIDMININSVTQVAMKNALKRTANILNSIAGHMLHVSQHKVDEIL 269
Query: 366 QASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLF 425
+ GDIR A+ +L F SLK PEE+ + R+ETL L
Sbjct: 270 SNNVGDIRNALLNLIFISLK---------------VPEEQENKCN------IREETLGLL 308
Query: 426 HALGKFLHNKR-ETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLH 484
H +G+ ++ KR +T N K D P+++++ QA L+FL
Sbjct: 309 HGVGRVINPKRIQTGNTWKFVHD-----------------PDEIITFFQSQATVFLNFLQ 351
Query: 485 ENCWL----DIMRQTMFYNLLRLQLLL 507
EN +L DI + + N+L L +L
Sbjct: 352 EN-YLNTMGDIEKVNICTNILSLANIL 377
>gi|195159392|ref|XP_002020563.1| GL13446 [Drosophila persimilis]
gi|194117332|gb|EDW39375.1| GL13446 [Drosophila persimilis]
Length = 531
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 154/322 (47%), Gaps = 27/322 (8%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
D++ + + + W E + P S EELAV KK+ E+R W + K + ++TG
Sbjct: 72 DNSESPPTVTEKWMESFAPTSSEELAVHPKKIGELRDWLRH-CEAMRWKVPAQICLLTGP 130
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY-TSKLDEFENFVERIR 245
G GKTAT++ +A G +L EW P + + +G Y S L+ F++F+ R
Sbjct: 131 TGAGKTATLQVLAKEFGYQLQEWINPVDCEVINTLGDQPSGGSYLGSHLEAFKSFLLRAS 190
Query: 246 RYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
RY S +++ ++L++D P +++ F+ L + + +S P ++ +
Sbjct: 191 RYKSLL-----NAQNKRLVLVEDFPNVLLSDAEANFDDLLEKYSIYGKS---PLVFIVAD 242
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-------YS 355
K+ ++ + + F + + ++ N I +++++ C Q Y
Sbjct: 243 -SKSRGLNISYKLFPD--QLKAKHRINHISFNSIAATIMQKSMKTFCAIMQQKGNKALYK 299
Query: 356 L-STEQIDLVAQASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPNFPEEKADGHGGFS 413
+ S+ +D + + GDIR A+ +L S+LK P M L++S + ++ S
Sbjct: 300 VPSSTVVDSIVVGAQGDIRNALINLHLSALKGVPNMPTKQLNVSVTSKGRQRKMQSTLKS 359
Query: 414 IQFGRDETLSLFHALGKFLHNK 435
I GRDE+++L HA+G+ L+ K
Sbjct: 360 I--GRDESITLMHAVGRVLNPK 379
>gi|154319373|ref|XP_001559004.1| hypothetical protein BC1G_02638 [Botryotinia fuckeliana B05.10]
gi|347832750|emb|CCD48447.1| similar to cell cycle checkpoint protein rad17 [Botryotinia
fuckeliana]
Length = 947
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 148/363 (40%), Gaps = 97/363 (26%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAE++ P +LEEL V +KKV +VR W + +G + +L++ G AG GKT TV+ +
Sbjct: 232 WAERFGPNNLEELGVHKKKVMDVRTWLDNVIG---GRMRQRLLILKGAAGTGKTTTVQLL 288
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG------STSP 252
A +G + EW P +I + G + S +FE+F+ R ++G
Sbjct: 289 AKDMGCDVLEWRNPVGSI------DSSDG--FQSMAAQFEDFMGRGGKFGQLDLFSDDHG 340
Query: 253 SIPGES------KSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRS-------THIP-- 295
IP E+ + I+L+++ P T R +A + R +L + S +H P
Sbjct: 341 DIPAEAEVKPLDQRKQIILVEEFPNTFTRSSSALQSFRSAILQYLASNTPLLSMSHNPHF 400
Query: 296 -----TAVVL--------TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
T VV+ T ADS TA + IL G + N I +
Sbjct: 401 KSDPITPVVMIVSETLLTTTSASADSF--TAHRLLGPE-ILQHPGVGVIEFNSIAPTILA 457
Query: 343 RTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
+ L + ++E + L GDIR AI SL+F L+ D
Sbjct: 458 KALETVVQKESRKSGRRKTPGPQVLKKLGEVGDIRSAIGSLEFMCLRGD----------- 506
Query: 399 PNFPEEKADGHGGFSIQFG------------------------RDETLSLFHALGKFLHN 434
D GG + FG R+ +L +FHA+GK ++N
Sbjct: 507 -------VDDWGG-KVVFGKGKKTSKDTSLTKMEEESLELITRREASLGIFHAVGKVVYN 558
Query: 435 KRE 437
KRE
Sbjct: 559 KRE 561
>gi|392562866|gb|EIW56046.1| Rad17-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 654
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 165/372 (44%), Gaps = 72/372 (19%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDS-KDKFSTNVLVITGQ 186
SA LW ++Y+P + +LAV ++K+++VR W E G S K K +LV+TG
Sbjct: 41 SADIGDDSLWVDRYEPMNEGDLAVHKRKIQDVRQWLLEAADGGPSGKLKKYRRILVLTGP 100
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCK-----TGLEYTSKLDEFENFV 241
AG KTAT+R ++ LG + EW ++ +++ N +G+EY ++F F+
Sbjct: 101 AGTAKTATLRVLSRELGYDILEWRN---SMDEQFSRNSDFSGGWSGVEYEGLSEKFSGFL 157
Query: 242 ERI---RRYGSTSPSIPGESKSSA-----------------------ILLIDDLPV---T 272
R R S++P S+++ ++L++DLP
Sbjct: 158 TRASSCRSIFSSTPDAQPLSQAAPSSQLPPSSSSSTTLHTPSPPKRQLILLEDLPNILHP 217
Query: 273 NGRTAFERLRQCLLLLVRSTHIPTAVVLTECG-KADSVDSTAQSFEELQSILVDAG---- 327
+ AF + + P +++++ G + ++ + Q ++ +D
Sbjct: 218 PTQAAFHTALESFTSSPEAGVAPLVIIISDAGVRGENPEDEGQRWKSRTKETMDVRNVLS 277
Query: 328 --------ARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ------IDLVAQASGGDIR 373
+++ NPI + ++ L + + S S+ +D++ ++S GDIR
Sbjct: 278 PNLLHSPYVTQISFNPIASTYMRSALKALLDRHFASSSSGARPTQAVLDVIVESSNGDIR 337
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF------GRDETLSLFHA 427
AI +LQF+ S KP +KA G S + R+++L+LFH
Sbjct: 338 SAIMALQFACTADS-------STRKPAKGTKKASKGQGPSARVMLEAVTRREQSLALFHL 390
Query: 428 LGKFLHNKRETD 439
LGK ++NKR+ D
Sbjct: 391 LGKIMYNKRKGD 402
>gi|157116587|ref|XP_001658564.1| cell cycle checkpoint protein rad17 [Aedes aegypti]
gi|108876412|gb|EAT40637.1| AAEL007649-PA [Aedes aegypti]
Length = 1080
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 148/330 (44%), Gaps = 45/330 (13%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDS-KDKFSTNVLVITGQAGVGKTATVRQ 197
W+ P+S+ +LAV KK+EEV+ WF R D K +L+++G AG GK++T++
Sbjct: 79 WSIDLAPKSVADLAVHFKKIEEVQQWF--RTYDRVKGTDPAAILLVSGPAGCGKSSTIKT 136
Query: 198 IASHLGARLYEWDTPTPT--IWQEYMHNCKTGLEYT---SKLDEFENFVERIRRYGSTSP 252
+A LG + EW TP + Y T + T S+ ++F++F+ + RY
Sbjct: 137 VAGELGYEVSEWTTPVDVDLFYHNYDFEGGTREDVTFRESQREQFDSFLYKTSRYC---- 192
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
SI + +LL+ D+P R E L+ L + P + T+ + +D
Sbjct: 193 SIFEGASDQKLLLVKDIPNVFLREP-EVLKASLEAYQETGASPLVFIATDTS-SKKLDIV 250
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICR-------QEQYSL-STEQIDLV 364
F +L D +A N ++ +K+ L +I Y + S + ID +
Sbjct: 251 YNLFPP--GVLQDFRIHHIAFNSVSTTLMKKALKRITSLMVGPEMTRHYRVPSQDLIDSI 308
Query: 365 AQASGGDIRQAITSLQFSSLKQDP-------------MLNLS-LSISKPNFPEEKADGHG 410
+S GD+R A ++ F+SLK P +LN S + +K E K G
Sbjct: 309 ILSSQGDLRSATLNVHFASLKNAPRLETEAVSGGSGTVLNTSGMRSTKGRKKETKLKSVG 368
Query: 411 GFSIQFGRDETLSLFHALGKFLHNKRETDN 440
G D +++L HALG+ + K E N
Sbjct: 369 G-------DGSITLMHALGRVFNPKFEDSN 391
>gi|449297400|gb|EMC93418.1| hypothetical protein BAUCODRAFT_42897, partial [Baudoinia
compniacensis UAMH 10762]
Length = 479
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 141/339 (41%), Gaps = 59/339 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E+Y P L ELAV ++KV +VR W E + K +LV+ G AG GKT V I
Sbjct: 5 WVEQYAPTDLPELAVHKRKVADVRQWLEGAFSGKRRK----ILVLKGCAGTGKTTAVHLI 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR---------YGS 249
A +G ++ EW P H L FE+F+ R R Y +
Sbjct: 61 ARGMGVKVSEWHNPIGVDSSSDAHPSTAAL--------FEDFISRAGRLTGLQLRPDYTT 112
Query: 250 TSP--------SIPGESKSSAILLIDDLPVTNGRTA--FERLRQCLLLLVRSTH----IP 295
P + G + +LL+++ P T RT+ + R L V ST +P
Sbjct: 113 RIPDSESNKDGDLEGLTNGKRLLLVEEFPNTFSRTSITLQSFRSTLSQYVSSTSGNEPVP 172
Query: 296 TAVVLTE------CGKADSVDSTAQSF---EELQSILVDAGARKVALNPITNGSIKRTLS 346
++++E ADS TA E + + L++ + NP+ + + L
Sbjct: 173 IVMIISETLLSTNTAAADSF--TAHRLLGPELMNNPLINT----IEFNPVAPTILIKALE 226
Query: 347 KICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQ--DPMLNLSLSISKPN 400
+ +E + L A GD+R A+++L+F L++ D + + +KP
Sbjct: 227 TVVVKEARKSGRRRTPGPAVLKRLAETGDVRSAVSALEFLCLREGNDDTWSSKVQFTKPK 286
Query: 401 FPEEKADGHG---GFSIQFGRDETLSLFHALGKFLHNKR 436
E + R+ +L +FHA+G+ ++N R
Sbjct: 287 KKSEPPMTEAEKEALKLISNRESSLGIFHAVGRVIYNNR 325
>gi|452988256|gb|EME88011.1| hypothetical protein MYCFIDRAFT_25692, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 482
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 172/402 (42%), Gaps = 77/402 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E++ P + ELAV ++K +VR W E + K +LV+ G AG GKT TVR +
Sbjct: 5 WTERFAPADISELAVHKRKAADVRGWLEATFKGKRHK----ILVLKGPAGTGKTTTVRLL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS------- 251
A LG L EW P TS FE FV R +
Sbjct: 61 AQELGIELLEWRDP----------GAVESDGTTSAAARFEEFVVRAGKLSGLKLTNGSHV 110
Query: 252 ------PSIPGES---KSSAILLIDDLPVTNGRTA--FERLRQCLLLLVRST----HIPT 296
P + E+ K +L+++ P T RT+ + R L V +T +PT
Sbjct: 111 NTKDLLPPVSEENDRKKRPQAILVEEFPNTFSRTSSTLQSFRSTLAQYVSATVSNDSMPT 170
Query: 297 AVVL--------TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI 348
+++ T ADS + EL + + + NPI + + + L I
Sbjct: 171 PMIMVISETLLSTNTATADSFTAHRLLGPELNT---NPYINIIEFNPIAHTYMVKALETI 227
Query: 349 CRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD------------PML 390
+E + + + I+ +A++ GDIR A++SL+F ++ D P
Sbjct: 228 VVKEARKSGRRRTPGPQIIERLAES--GDIRSAVSSLEFLCVRGDDGQWSSKVTFTKPKT 285
Query: 391 N-LSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR-ETDNLVKMDQ-D 447
+ LS S++ EE+A + R+ +L +FHA+GK ++NKR + ++ + Q
Sbjct: 286 SRLSKSLAPLTNAEEEA-----MKLISNRESSLGIFHAVGKVVYNKRTDPEHRSGLAQPP 340
Query: 448 AFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWL 489
A++ + + S++P P+ ++ + + LHEN L
Sbjct: 341 AWLPQHRRSKMP--ETNPDTLIDELGTDTSTFVASLHENYVL 380
>gi|390176925|ref|XP_002136949.2| GA26853 [Drosophila pseudoobscura pseudoobscura]
gi|388858841|gb|EDY67507.2| GA26853 [Drosophila pseudoobscura pseudoobscura]
Length = 535
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 34/335 (10%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
D++ + + + W E + P S EELAV KK+ E+R W + K + ++TG
Sbjct: 57 DNSESPPTVTEKWMESFAPTSSEELAVHPKKIGELRDWLRH-CEAMRWKVPAQICLLTGP 115
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY-TSKLDEFENFVERIR 245
G GKTAT++ +A G +L EW P + + +G Y S L+ F++F+ R
Sbjct: 116 TGAGKTATLQVLAKEFGYQLQEWINPVDCEVINTLGDQPSGGSYLGSHLEAFKSFLLRAS 175
Query: 246 RYGSTSPSIPGESKSSAILLIDDLP---VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
RY S +++ ++L++D P +++ F+ L + + L S+ +
Sbjct: 176 RYKSLL-----NAQNKRLVLVEDFPNVLLSDAEANFDDLLEQVPLKKHSSPVINTTFFYR 230
Query: 303 ----CGKADSV----DSTAQSFEELQSILVDAGARKVALNPITNGSI-----KRTLSKIC 349
GK+ V DS ++ + D K +N I+ SI ++++ C
Sbjct: 231 KYSIYGKSPLVFIVADSKSRGLNISYKLFPDQLKAKHRINHISFNSIAATIMQKSMKTFC 290
Query: 350 RQEQ-------YSL-STEQIDLVAQASGGDIRQAITSLQFSSLKQDP-MLNLSLSISKPN 400
Q Y + S+ +D + + GDIR A+ +L S+LK P M L++S +
Sbjct: 291 AIMQQKGNKALYKVPSSTVVDSIVVGAQGDIRNALINLHLSALKGVPNMPTKQLNVSVTS 350
Query: 401 FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK 435
++ SI GRDE+++L HA+G+ L+ K
Sbjct: 351 KGRQRKMQSTLKSI--GRDESITLMHAVGRVLNPK 383
>gi|453088266|gb|EMF16306.1| hypothetical protein SEPMUDRAFT_55499 [Mycosphaerella populorum
SO2202]
Length = 854
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 157/364 (43%), Gaps = 60/364 (16%)
Query: 117 RFEGLVNPDHDSASASS-STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDK 175
+F+ N + +A+A S W E++ P L ELAV ++KV +VR W + + K
Sbjct: 161 KFQKTSNGERVTAAAKSHDISTPWTERFAPNDLSELAVHKRKVADVRKWLDLAYRERHQK 220
Query: 176 FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLD 235
VL++ G AG KT T+R +A +G L E W+E + T + +
Sbjct: 221 ----VLILKGAAGTAKTTTLRLLARDIGIELIE--------WRESSASDNTSEGVIASVQ 268
Query: 236 EFENFVERIRRY---------GSTSPSI---PGESKSSA------ILLIDDLPVT--NGR 275
F +FV R + +P++ P +SSA LL+++ P T
Sbjct: 269 RFADFVARAGNVQGLTLSTDKNAVAPAVESQPDIGQSSAAREHRQALLVEEFPNTFSKAS 328
Query: 276 TAFERLRQCLLLLVRST----HIPTAVVL--------TECGKADSVDSTAQSFEELQSIL 323
+A + R L V ST PT VVL T ADS + EL S
Sbjct: 329 SALQSFRTTLARYVMSTVEADAWPTPVVLVISETLLSTNTASADSFTAHRLLGPELTS-- 386
Query: 324 VDAGARKVALNPITNGSIKRTLSKICRQEQY---SLSTEQIDLVAQ-ASGGDIRQAITSL 379
+ + NPI + + L I +E T D++ + A GDIR A++SL
Sbjct: 387 -NPNINTIEFNPIAPTILTKALEMIVVKEARKSGKRKTPGPDILKRLAECGDIRSAVSSL 445
Query: 380 QFSSLKQDPMLNLS--LSISKPNF-----PEEKADGHGGFSIQFGRDETLSLFHALGKFL 432
+F ++ D S ++ +KP P KA+ + R+ +L +FH++GK +
Sbjct: 446 EFLCVRGDEGDTWSSKVAFTKPKHARAPAPTTKAE-QDAMRLISNRESSLGIFHSVGKVV 504
Query: 433 HNKR 436
+NKR
Sbjct: 505 YNKR 508
>gi|320592057|gb|EFX04496.1| cell cycle checkpoint protein [Grosmannia clavigera kw1407]
Length = 979
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 153/357 (42%), Gaps = 75/357 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P +L+ELAV +KKV +VR W E+ L + +LV+ G AG GKT T++ +
Sbjct: 240 WSERFAPVNLDELAVHKKKVADVRRWLEDVLA---GRLRQRLLVVKGAAGTGKTTTLQLL 296
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY----------- 247
A LG + EW P+ + L +TS +F+ F+ R R+
Sbjct: 297 ARDLGLEILEWRNPSGS-------GAGASLGFTSAAVQFDEFLNRGSRFSQLDLDAGGSD 349
Query: 248 ----------GSTSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRSTHIP 295
GS +PS + I+LI++ P T R ++ R +L + +T P
Sbjct: 350 SDDDTARRLNGSLNPSDSNRQRRK-IILIEEFPNTFMRSSSSLTSFRNTVLEFL-ATKTP 407
Query: 296 TAVVLTECGKADSVD------------------STAQSFEELQ----SILVDAGARKVAL 333
+ + + + SVD ++A SF + IL G +
Sbjct: 408 SLAMFAQ--RQASVDNVSPVIMVVSETLLTTTSASADSFTAHRLLGPEILRHPGTGVIEF 465
Query: 334 NPITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPM 389
N I + R L + ++E ++ L GD+R AI SL+F +K D
Sbjct: 466 NAIAPSLLARALEIVVQKEARKSGRKRTPGPQVLKRLGEVGDVRSAIASLEFLCVKGDDD 525
Query: 390 LNLSLSISKPNF------PEEKADGHG---GFSIQFGRDETLSLFHALGKFLHNKRE 437
+ +K NF P+ A G + R+ +L +FHA+GK ++NKRE
Sbjct: 526 GDWG---AKVNFTKGRKGPKNAALTKGEAETLEMVSQREASLGVFHAVGKVVYNKRE 579
>gi|358054073|dbj|GAA99872.1| hypothetical protein E5Q_06575 [Mixia osmundae IAM 14324]
Length = 1215
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 176/408 (43%), Gaps = 70/408 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW + P + +ELAV +K+E+VR W E L K +LV++G G GKTA +R
Sbjct: 630 LWTDLCTPETADELAVHPRKIEDVRRWLREALEPGKLAKYRRLLVLSGPTGSGKTAVIRV 689
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV------ERIRRYGSTS 251
+A LGA L E+ T + L ++L + +FV E IR +
Sbjct: 690 LAKELGADLVEFKTGEEDGADSLSRALPSFLARVAQLPQL-SFVSIDSPKEPIR---IAT 745
Query: 252 PSIPGESKSSAILLIDDLP-VTNGRTAFERLRQCLLLLVRS----THIPTAVVLTEC--- 303
P E + I+L++DLP + + + E R +L V S IP ++++E
Sbjct: 746 PQSREERRK--IILVEDLPNIFSSQVTRETFRAAILNFVASRRIRAGIPLVLIISEAQIR 803
Query: 304 -------GKADSVDSTA--QSFEELQS-----------ILVDAGARKVALNPITNGSIKR 343
G SV +A QS S L DA ++ N I +K+
Sbjct: 804 SSTDEEQGILGSVSGSAGWQSGPSTGSQLSVRSVVPPDALGDARCLEIKFNAIAPTIMKK 863
Query: 344 TLSKI-----CRQEQYSLSTEQ-----IDLVAQASGGDIRQAITSLQFSSLKQDPMLNLS 393
L+++ S S E+ IDL + SGGDIR A+ +LQF+S + +L
Sbjct: 864 ALARMIESLFAANRHLSESIERPTAAAIDLATKLSGGDIRGALMNLQFASGAA--LRDLE 921
Query: 394 LSISKPNFPEEKADGHG----GFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQ--D 447
SK ++ G G I R+ L +FHALGK L++KR +N K D D
Sbjct: 922 QRASKLKLSSKRKRGKSSRDLGDVIHL-RESPLFIFHALGKILYSKRWGEN-AKDDAKGD 979
Query: 448 AFVVKDKF---------SRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
KD F R PL+ + + +LS + + +LH+N
Sbjct: 980 QIRPKDPFKLPKHLIHMKREPLRTNV-DAMLSDMPVDSDMFMAYLHQN 1026
>gi|326434933|gb|EGD80503.1| hypothetical protein PTSG_01094 [Salpingoeca sp. ATCC 50818]
Length = 711
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 27/328 (8%)
Query: 127 DSASASSSTQQ-----LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDK-FSTNV 180
D A SS+ ++ LW ++ +P + + LAV +KKV+EVR W + + ++ V
Sbjct: 39 DDAGGSSAPKRQDGAALW-DRCQPTTADALAVHKKKVDEVRGWLTHFFSRGQSQALASKV 97
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTG-LEYTSKLDEFEN 239
LV+ G +G GKTAT+R + L + EW P + Q+ + + G + + S+ +F++
Sbjct: 98 LVLIGPSGCGKTATLRVVCRELNCTILEWINP---VSQQRVAFDRAGEVWWESQRAQFQS 154
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHIPTAV 298
F+ R R+Y + S + S ++L++DLP + L + P
Sbjct: 155 FLLRSRKYRALSIGDTTATTSKQLILVEDLPNYLRSQHEVPAFHDLLRSYNAAAVAPLVF 214
Query: 299 VLTE---CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
VLTE +V + ELQ + + NP+ +++ L+ +C +
Sbjct: 215 VLTEEHLGSLGHAVSRLFPTVVELQGVF-----NTIRFNPVAPTKMEKALTTMCTIAKID 269
Query: 356 LSTEQIDLVAQASGGDIRQAITSLQF-------SSLKQDPMLNLSLSISKPNFPEEKADG 408
+ +A + GDIR A +LQF ++L + S ++ +
Sbjct: 270 APRSSLKEIALQADGDIRAACNALQFLHRPRRGAALPKQTRKRSKRSKTRAASSSSSSSA 329
Query: 409 HGGFSIQFGRDETLSLFHALGKFLHNKR 436
GRD ++ LFHA+G+ L +R
Sbjct: 330 PSAAKAVRGRDTSMRLFHAVGRILRARR 357
>gi|115449973|ref|XP_001218744.1| predicted protein [Aspergillus terreus NIH2624]
gi|114187693|gb|EAU29393.1| predicted protein [Aspergillus terreus NIH2624]
Length = 816
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 151/344 (43%), Gaps = 52/344 (15%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQA 187
++ S Q W ++Y P+ L+ELAV +KKV +V AW ++ L G+S+ + +LV+ G A
Sbjct: 180 STQSPDGQLPWTQRYPPQDLDELAVHKKKVADVNAWLKDALAGNSRRR----LLVLRGPA 235
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G GKT TV +A LG + EW P + + +Y S F+ F++R Y
Sbjct: 236 GSGKTTTVSLLAKSLGFEIVEWKNPPVSDYASS--------DYVSVGKRFDEFLDRGSSY 287
Query: 248 GS---TSPSIPGESKSSA-------ILLIDDLPVTNGRT----AFE-RLRQCLLL--LVR 290
G S + P ES S ++LI++ P N + AF L++CL +
Sbjct: 288 GGLELDSGASPRESDSDHVNTTSRRVILIEEFPALNRNSPSLAAFRLSLQRCLATSGIET 347
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRT------ 344
++ T +V+ + DS+ + +L R + I SI T
Sbjct: 348 GSNPETPIVMIVSETHLNSDSSLADNITVYRLLGAEICRHPSTTIIDFNSIAPTFMYKAL 407
Query: 345 ---LSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK--- 398
L K R + L A + GDIR AI SL+F L+ + L + K
Sbjct: 408 GLVLDKEARYSGHHTKPAHAVLQAISKTGDIRSAINSLEFLCLRPEAAKALKTNARKTKG 467
Query: 399 ------PNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
P E+ S+ R+ +L +FHA+GK ++NKR
Sbjct: 468 QRKTNASTLPTEE---QTLLSVS-QRESSLGIFHAVGKIVYNKR 507
>gi|326476968|gb|EGE00978.1| cell cycle checkpoint protein RAD17 [Trichophyton equinum CBS
127.97]
Length = 929
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 180/422 (42%), Gaps = 67/422 (15%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQ 186
S++ + +T + WAE++ P +L+ELAV ++KV +V+ W E LG S+ +VLV+ G
Sbjct: 270 SSAPAQTTGKPWAEQFAPVNLDELAVHKRKVADVQNWLNEVFLGRSR----RSVLVLKGP 325
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
AG GKT T+ ++ LG + EW T EY + Y S +F++F+ R +
Sbjct: 326 AGSGKTTTISLLSKALGYDIVEWRNSAGT---EY-----SAQGYASAGTQFDDFLGRGEK 377
Query: 247 YGSTSPSIPGE------------SKSSAILLIDDLP--VTNGRTAFERLRQCLLLLVRST 292
Y + GE S I+L+++ P +T G R LL S+
Sbjct: 378 YNCL--ELDGEASSTSSSNAALQSSRRRIMLVEEFPSSLTPGSPGLTAFRSALLRHAASS 435
Query: 293 ----------------HIPTAVVLTEC--GKADSVDSTAQSFEELQSILVD-AGARKVAL 333
+ P ++++E G S + L L + G +
Sbjct: 436 FPSIAARMAARPMETPNTPVVIIVSETLLGDGTSFSDSFTVHRLLGPELSNHPGVSIIEF 495
Query: 334 NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ----ASGGDIRQAITSLQFSSLKQDPM 389
NPI + + L + ++E ++I A A GD+R AI+SL+F L+
Sbjct: 496 NPIAPTFLTKALDLVLKKEARLSHRKRIPGPAVLKRFAEMGDVRSAISSLEFICLQGGDY 555
Query: 390 LNLSLSI-SKPNFPEEKADGHGGFSIQ-----FGRDETLSLFHALGKFLHNKRETDNLVK 443
S ++ S+P + ++ R+ +L +FHA+GK ++NKRE N
Sbjct: 556 EGYSGTLNSRPKRSSKTIVPPTAMELETLQMVTQREASLGIFHAVGKIMYNKREEPNPAP 615
Query: 444 MDQDAFVVKDKFSRLPLKMD-----APEKVLSQAHGQARPVLDFLHEN----CWLDIMRQ 494
+ K S+L D + E ++++ + L LHEN C D+ +
Sbjct: 616 STRTGSRAKKPASQLGDHHDLVSQVSVEDLINETGTDIQTFLSALHENYPPSCHGDLFTE 675
Query: 495 TM 496
+
Sbjct: 676 CL 677
>gi|367020772|ref|XP_003659671.1| hypothetical protein MYCTH_63866 [Myceliophthora thermophila ATCC
42464]
gi|347006938|gb|AEO54426.1| hypothetical protein MYCTH_63866 [Myceliophthora thermophila ATCC
42464]
Length = 916
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 163/379 (43%), Gaps = 77/379 (20%)
Query: 116 SRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDK 175
SR VN D D+ + W+E++ P SL+ELAV ++KV++VR W ++ L +
Sbjct: 222 SRTGASVNDDDDA--------RPWSERFAPVSLDELAVHKRKVQDVRRWLDDVL---SGR 270
Query: 176 FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLD 235
+LV+ G AG GKT T+R +A + + EW P + G Y S
Sbjct: 271 LRQRLLVLKGPAGSGKTTTLRLLARDMRCEVLEWKNPANSFGL-------AGHGYQSAAS 323
Query: 236 EFENFVERIRRYG--------STSPSIPGESKSSA------------ILLIDDLPVTNGR 275
+FE F+ R ++G +T +P S A ++L+++ P T R
Sbjct: 324 QFEEFLGRGGKFGQLDVESDDATPQPMPPPPPSGAAANGAGKATERRLMLVEEFPNTFMR 383
Query: 276 TA--FERLRQCLLLLVRSTH---------------IPTAVVLTECGKADSVDSTAQSFEE 318
++ R +L + + P +V++E + ++A SF
Sbjct: 384 SSSGLVGFRNAILQFLAANTPALAGFGFGYNSEPVTPIVMVISET-LLTTTSASADSFTA 442
Query: 319 LQ----SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI--DLVAQASG--G 370
+ IL G + NPI + + L + ++E + LV Q G G
Sbjct: 443 HRLLGPEILRHPGTGVIEFNPIAPTFLAKALELVVQKEARKSGRRRTPGPLVLQRLGEIG 502
Query: 371 DIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG----------RDE 420
DIR AI+SL+F LK D + S+ F + K G ++ G R+
Sbjct: 503 DIRNAISSLEFLCLKGDDEADWG---SRVAFTKPKRGAKGVPALTKGEQDSLELVSQREA 559
Query: 421 TLSLFHALGKFLHNKRETD 439
TL +FHA+GK ++NKR ++
Sbjct: 560 TLGIFHAVGKVVYNKRGSE 578
>gi|348688929|gb|EGZ28743.1| hypothetical protein PHYSODRAFT_309501 [Phytophthora sojae]
Length = 570
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 44/337 (13%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWA+ Y P++++EL V +KKV+E+ W E S F +L + G G GK+ VR
Sbjct: 40 LWADLYTPKTVDELCVNKKKVQEISEWLERNASPSAGVFQKRLLFLCGPPGSGKSTAVRC 99
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGL--EYTSKLDEFENFVERIRRYGS--TSPS 253
+A LG + EW+ + Y + S +D+F +F+ R Y + + S
Sbjct: 100 VARKLGLLVKEWEDNSAAGKLNYERKLRDDFWTPQVSSVDDFSDFIHRSSAYAALPIATS 159
Query: 254 IP----------------------GESKSSAILLIDDLPVTNGRTA------FERLRQCL 285
P S + ++LI+ P + + +R+ Q +
Sbjct: 160 RPTSSIGRKRRLSSSQQSLDSSQAASSGTGQLILIESWPQSWSKDPSQYEEKLQRIYQHV 219
Query: 286 LLLVRSTHIPTAVVLTEC-GKADSVDSTAQSF--EELQSILVDAGARKVALNPITNGSIK 342
+ P + ++ G +D ++ F E + S L + +N +T+ +K
Sbjct: 220 VDPAGGCRFPVVCIYSDVRGSKIDLDHLSRKFSREVMHSPLTTV----ININAVTSAQLK 275
Query: 343 RTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF---SSLKQDPMLNLSLSISKP 399
+ L+++ QE + +I V +S GD+R A+ LQ +LK+ P +N S K
Sbjct: 276 KHLTRVAAQENCASQPAEIQKVIDSSNGDMRHALNMLQLLQNPTLKR-PKVNPSKKAKKS 334
Query: 400 NFPEEKADGHGGFSIQFG-RDETLSLFHALGKFLHNK 435
++ S G RD LS FH +GK LH K
Sbjct: 335 GASSGSSESKSSVSTNPGARDPFLSDFHVVGKLLHGK 371
>gi|213405999|ref|XP_002173771.1| checkpoint protein rad17 [Schizosaccharomyces japonicus yFS275]
gi|212001818|gb|EEB07478.1| checkpoint protein rad17 [Schizosaccharomyces japonicus yFS275]
Length = 520
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 138/323 (42%), Gaps = 50/323 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
+LW +K+ P+ +LAV + KV VR W +E D S+ +LV++G +G GK+ V
Sbjct: 71 ELWTDKFAPQLSVDLAVHKAKVTAVRNWMKE------DHSSSRLLVLSGPSGCGKSTCVE 124
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A L A L EW P++ + + + S +F F+ Y S P
Sbjct: 125 VLARELNASLIEWS--NPSLDAGAVDDVNGRNDKASVWKKFGQFMATCETYPELPLSAPI 182
Query: 257 ESKSSA-------ILLIDDLPVTNGRTA-FERLRQCLLLLVRS---THIPTAVVLTECGK 305
+S+ + +D+LP+ + R + R LL ++S I + T+
Sbjct: 183 RGIASSRFHMSKKFVYLDELPMLSNRNGTIDTFRSLLLTALQSRGCNSIILNITETQYFM 242
Query: 306 ADSVDSTAQ--SFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICR-QEQYSLSTEQ- 360
A+ D Q ++ L IL D + NPI + +++ L ++ R Q Q S Q
Sbjct: 243 AEDADWQDQYTAYRLLGDDILKDPSVTHITFNPIASSFMRKALMRVMRLQTQVKQSAAQT 302
Query: 361 ---IDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG 417
I + + + GD+R AI +LQ+ S +
Sbjct: 303 SQVISQIIEGNEGDLRSAINNLQYVFT-----------------------CRAAVSSKSS 339
Query: 418 RDETLSLFHALGKFLHNKRETDN 440
RD L LFHA+GK + NKRE D+
Sbjct: 340 RDFGLGLFHAVGKVIWNKREGDD 362
>gi|302507079|ref|XP_003015496.1| cell cycle checkpoint protein Rad17, putative [Arthroderma
benhamiae CBS 112371]
gi|291179068|gb|EFE34856.1| cell cycle checkpoint protein Rad17, putative [Arthroderma
benhamiae CBS 112371]
Length = 930
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 174/412 (42%), Gaps = 69/412 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVRQ 197
WAE++ P +L+ELAV ++KV +V+ W E L G S+ ++LV+ G AG GKT T+
Sbjct: 282 WAEQFAPANLDELAVHKRKVADVQNWLNEVLIGRSR----RSILVLKGPAGSGKTTTISL 337
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
++ LG + EW T EY + Y S +F++F+ R +Y + GE
Sbjct: 338 LSKALGYDIVEWRNSAGT---EY-----SAQGYASAGTQFDDFLGRGEKYNCL--ELDGE 387
Query: 258 ------------SKSSAILLIDDLP--VTNGRTAFERLRQCLL-------------LLVR 290
S I+L+++ P +T G R LL + R
Sbjct: 388 TSSTSSNSAALQSSRRRIMLVEEFPSSLTPGSPGLTAFRSALLRHAASAFPSIAARIAAR 447
Query: 291 STHIP-TAVVL----TECGKADSVDSTAQSFEELQSILVD-AGARKVALNPITNGSIKRT 344
T IP T VV+ T G S + L L + G + NPI + +
Sbjct: 448 PTEIPNTPVVIIVSETLLGDGTSFSDSFTVHRLLGPELSNHPGVSIIEFNPIAPTFLTKA 507
Query: 345 LSKICRQEQYSLSTEQIDLVAQ----ASGGDIRQAITSLQFSSLKQDPMLNLSLSI---- 396
L + ++E ++I A A GD+R AI+SL+F L+ S ++
Sbjct: 508 LDLVLKKEARLSHRKRIPGPAVIKRLAEMGDVRSAISSLEFICLQGGDYEGYSGTLNSRL 567
Query: 397 ---SKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKD 453
SK P + + R+ +L +FHA+GK ++NKRE + + +
Sbjct: 568 KRSSKTAVPPTAMEAE-TLQMVTQREASLGIFHAVGKIMYNKREEPSPAPPARTGLRARK 626
Query: 454 KFSRLPLKMD-----APEKVLSQAHGQARPVLDFLHEN----CWLDIMRQTM 496
S+L D + E ++++ + L LHEN C D+ +++
Sbjct: 627 PPSQLGDHHDLVSQVSVEDLINETGTDIQTFLSALHENYPPSCHGDLFTESL 678
>gi|255577518|ref|XP_002529637.1| cell cycle checkpoint protein rad17, putative [Ricinus communis]
gi|223530863|gb|EEF32724.1| cell cycle checkpoint protein rad17, putative [Ricinus communis]
Length = 163
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 53/65 (81%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
S+ SS+ ++LW + YKPRSLEELAV +KKV+EV+ WFEERL SKDK S VLVITGQA
Sbjct: 90 SSHGSSNLKELWVDIYKPRSLEELAVHQKKVKEVKMWFEERLKASKDKLSNYVLVITGQA 149
Query: 188 GVGKT 192
GVGK+
Sbjct: 150 GVGKS 154
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 2 QISLSFEKFDEVLNGSKVSNVIWNQENDSALGSSSTQQLWTDKYKLCSLEEPDVQKKNVE 61
+I E FDE GS+VS W + S+ GSS+ ++LW D YK SLEE V +K V+
Sbjct: 62 EIKFPSEDFDEFFYGSEVSAANWKETCGSSHGSSNLKELWVDIYKPRSLEELAVHQKKVK 121
Query: 62 H 62
Sbjct: 122 E 122
>gi|389632077|ref|XP_003713691.1| hypothetical protein MGG_15566 [Magnaporthe oryzae 70-15]
gi|351646024|gb|EHA53884.1| hypothetical protein MGG_15566 [Magnaporthe oryzae 70-15]
gi|440474001|gb|ELQ42770.1| cell cycle checkpoint protein RAD17 [Magnaporthe oryzae Y34]
gi|440488302|gb|ELQ68031.1| cell cycle checkpoint protein RAD17 [Magnaporthe oryzae P131]
Length = 980
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 151/354 (42%), Gaps = 73/354 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W+E++ P +L+ELAV ++KV +VR W E+ + + +L++ G AG GKT T++ +
Sbjct: 259 WSERFGPANLDELAVHKRKVADVRRWLEDVM---DGRIRQRLLILKGAAGSGKTTTLKLL 315
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS--------- 249
A L + EW PT + G Y S +FE+F+ R ++G
Sbjct: 316 ARELKCEVLEWRNPTSSY-------GGPGQGYQSAAAQFEDFMGRGGKFGQLDFEEDDGM 368
Query: 250 ---TSPS----IPGESKSSAILLIDDLPVT-----NGRTAFERLRQCLLLLVRSTH---- 293
SP P E ++L+++ P T +G T+F R +L + S
Sbjct: 369 PSRASPGGRRQTPPEEGGRRLMLVEEFPNTFMRSSSGLTSF---RNAVLGFLASNTPSLA 425
Query: 294 ------------IPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPIT 337
P ++++E + ++A SF + IL G + N I
Sbjct: 426 AVGQHTQREQQITPVVMIISET-LLTTTSASADSFTAHRLLGPEILRHPGTGVIEFNAIA 484
Query: 338 NGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLS 393
+ + L + ++E + L GDIR AI+SL+F LK D +
Sbjct: 485 PTILSKALELVVQKEARKSGRRRTPGPQVLKRLGEIGDIRNAISSLEFLCLKGDQDADWG 544
Query: 394 LSISKPNFPEEKADGHGGFSIQFG----------RDETLSLFHALGKFLHNKRE 437
+S F + K G S+ G R+ +L +FHA+GK ++NKR+
Sbjct: 545 ARVS---FTKSKK-GAKDLSLTKGERESLEMVSQREASLGIFHAVGKVVYNKRD 594
>gi|326472169|gb|EGD96178.1| hypothetical protein TESG_03631 [Trichophyton tonsurans CBS 112818]
Length = 929
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 174/408 (42%), Gaps = 63/408 (15%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQ 186
S+ + +T + WAE++ P +L+ELAV ++KV +V+ W E LG S+ +VLV+ G
Sbjct: 270 SSVPAQTTGKPWAEQFAPVNLDELAVHKRKVADVQNWLNEVFLGRSR----RSVLVLKGP 325
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
AG GKT T+ ++ LG + EW T EY + Y S +F++F+ R +
Sbjct: 326 AGSGKTTTISLLSKALGYDIVEWRNSAGT---EY-----SAQGYASAGTQFDDFLGRGEK 377
Query: 247 YGSTSPSIPGE------------SKSSAILLIDDLP--VTNGRTAFERLRQCLLLLVRST 292
Y + GE S I+L+++ P +T G R LL S+
Sbjct: 378 YNCL--ELDGEASSTSSSNAALQSSRRRIMLVEEFPSSLTPGSPGLTAFRSALLRHAASS 435
Query: 293 ----------------HIPTAVVLTEC--GKADSVDSTAQSFEELQSILVD-AGARKVAL 333
+ P ++++E G S + L L + G +
Sbjct: 436 FPSIAARMAARPMETPNTPVVIIVSETLLGDGTSFSDSFTVHRLLGPELSNHPGVSIIEF 495
Query: 334 NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ----ASGGDIRQAITSLQFSSLKQDPM 389
NPI + + L + ++E ++I A A GD+R AI+SL+F L+
Sbjct: 496 NPIAPTFLTKALDLVLKKEARLSHRKRIPGPAVLKRFAEMGDVRSAISSLEFICLQGGDY 555
Query: 390 LNLSLSI-SKPNFPEEKADGHGGFSIQ-----FGRDETLSLFHALGKFLHNKRETDNLVK 443
S ++ S+P + ++ R+ +L +FHA+GK ++NKRE N
Sbjct: 556 EGYSGTLNSRPKRSSKTIVPPTAMELETLQMVTQREASLGIFHAVGKIMYNKREEPNPAP 615
Query: 444 MDQDAFVVKDKFSRLPLKMD-----APEKVLSQAHGQARPVLDFLHEN 486
+ K S+L D + E ++++ + L LHEN
Sbjct: 616 STRTGSRAKKPASQLGDHHDLVSQVSVEDLINETGTDIQTFLSALHEN 663
>gi|50306069|ref|XP_452996.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642129|emb|CAH01847.1| KLLA0C17820p [Kluyveromyces lactis]
Length = 648
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 148/330 (44%), Gaps = 72/330 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +K+ P+ ++++A+ +KK+EEVR + E + D+ +L+++G AG K+ V+ I
Sbjct: 63 WYDKFSPKRVDDIALHKKKIEEVRYYLEGMVSGKSDE---RILLLSGPAGCSKSTCVKLI 119
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE- 257
+ + R + +GL + + E NF E + S SPS +
Sbjct: 120 SDEIVPR----------------YRATSGLTVSGR--EVPNFTEYLTDMSSVSPSESFDD 161
Query: 258 ---------SKSSAILLIDDLPVTNGRTAFERLRQCLL-LLVRSTHIPTAVV-LTECGKA 306
++ ++LL++DLP + +R R+ +L L S +P V+ LTEC
Sbjct: 162 FLLQSKYLIGRNLSVLLVEDLPNVFHESTLKRFRESILSWLFASDRLPPLVICLTECQLL 221
Query: 307 DS--------VDSTAQSFEEL-QSILVDAGARKVALNPIT----NGSIKRTLSKICRQ-- 351
DS +DST S L + IL+ ++ NPI +K+ + K+ R+
Sbjct: 222 DSNSTNSSFGIDSTFISETILGKDILMHPLLHRIKFNPINATLMTKHLKQIIQKVRREIP 281
Query: 352 -EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG 410
E+Y S I +A +S GDIR I +LQF +F E +
Sbjct: 282 SEKYQRSGTFIKNLA-SSTGDIRSGIAALQF--------------WCTSSFDETNS---- 322
Query: 411 GFSIQFGRDETLSLFHALGKFLHNKRETDN 440
F R+ + S FH +GK ++ ++ +N
Sbjct: 323 ----IFTRESSTSYFHGIGKVIYGSKDNEN 348
>gi|403416769|emb|CCM03469.1| predicted protein [Fibroporia radiculosa]
Length = 708
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 188/464 (40%), Gaps = 84/464 (18%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFST--NVLVITGQAGVGKT 192
QLW ++Y+P + E+LAV ++K++EVR W E G K +L +TG AG GKT
Sbjct: 83 HQLWVDRYEPLTEEDLAVNKRKIQEVRQWLMEAFDGGPSGKLRKYRRILALTGPAGTGKT 142
Query: 193 ATVRQIASHLGARLYEWDTPTP---TIWQEYMHNC-KTGLEYTSKLDEFENFVERI---R 245
A +R +A L L EW T +++ + + +EY D+F F+ R
Sbjct: 143 AAIRVLARELNCDLLEWRNSMDEQFTRTDDFVLDLDEEPVEYEGLADKFRTFLTRASSCH 202
Query: 246 RYGSTSPSIPGESKSSA---------------------------ILLIDDLPVTNGRTAF 278
STS +PG S+ I+L++DLP A
Sbjct: 203 TIFSTSTVLPGSQTQSSQATVPSRSHTPELAHSTSTGEAQAKRQIILLEDLPNVL-HPAT 261
Query: 279 ERLRQCLLLLVRSTHI---PTAVVLTECG-KADSVDSTAQSFEELQ-----------SIL 323
+ + L +H+ P +++++ G + + ++ A + + S+L
Sbjct: 262 QAVVHAALQTFAFSHVLGAPLVLIISDTGFRGEDPENDAGGWRRAKEIIDIRTVLPPSLL 321
Query: 324 VDAGARKVALNPITNGSIKRTLSKICRQEQYSL-----STEQIDLVAQASGGDIRQAITS 378
++ +T +++ L + S S + +D + ++S GDIR A+ +
Sbjct: 322 NSPSVTQIGFRSLTPTFLRKALQNLLNAHYSSASGSPPSKDVLDAITESSNGDIRSAVMT 381
Query: 379 LQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF------GRDETLSLFHALGKFL 432
LQF+ + + K GG + R+++L+LFH LGK L
Sbjct: 382 LQFACTADTGKRSAKGTRKK----------RGGLQVGVLMEVVTRREQSLALFHLLGKIL 431
Query: 433 HNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQ--ARPVLDFLHENCWLD 490
+NKR+ D + +D+ L+ P Q H + +R +D L+ + +D
Sbjct: 432 YNKRKGDPESTSASAKDIQRDRMFDAQLRDPPPLPTHLQEHHRRASRVDVDTLYADSPID 491
Query: 491 IMRQTMFYNLLRLQLLLVEYYLEILIQC--LLGGMLFVSQSSGE 532
+++ Q Y L +C L + ++ S GE
Sbjct: 492 ASLLSLYVQQNYTQ------YCNTLDECAALADWLSYIDSSGGE 529
>gi|302664510|ref|XP_003023884.1| cell cycle checkpoint protein Rad17, putative [Trichophyton
verrucosum HKI 0517]
gi|291187904|gb|EFE43266.1| cell cycle checkpoint protein Rad17, putative [Trichophyton
verrucosum HKI 0517]
Length = 932
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 181/422 (42%), Gaps = 67/422 (15%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQ 186
S++ + + + WAE++ P +L+ELAV ++KV +V+ W E L G S+ ++LV+ G
Sbjct: 273 SSAPAQAAGKPWAEQFAPVNLDELAVHKRKVADVQNWLNEVLIGRSR----RSILVLKGP 328
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
AG GKT T+ ++ LG + EW T EY + YTS +F++F+ R +
Sbjct: 329 AGSGKTTTISLLSKALGYDIVEWRNSAGT---EY-----SAQGYTSAGAQFDDFLGRGEK 380
Query: 247 YGSTSPSIPGESKSSA------------ILLIDDLP--VTNGRTAFERLRQCLL------ 286
Y + GE+ S + I+L+++ P ++ G R LL
Sbjct: 381 YNCL--ELDGETSSISSSSTALQSSKRRIMLVEEFPSSLSPGSPGLTAFRSALLRHAASS 438
Query: 287 -------LLVRSTHIP-TAVVL----TECGKADSVDSTAQSFEELQSILVD-AGARKVAL 333
+ R T P T VV+ T G S+ + L L + G +
Sbjct: 439 FPSIAARIAARPTETPNTPVVIIVSETLLGDGTSLSDSFTVHRLLGPELSNHPGVSIIEF 498
Query: 334 NPITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQ--- 386
NPI + + L + ++E ++I L A GD+R AI+SL+F L+
Sbjct: 499 NPIAPTFLTKALDLVLKKEARLSHRKRIPGPAVLKRLAEMGDVRSAISSLEFICLQGGDY 558
Query: 387 ---DPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVK 443
MLN S A + R+ +L +FHA+GK ++NKRE +
Sbjct: 559 EGYSGMLNSRPKRSGKTAVPPTAMEAETLQMVTQREASLGIFHAVGKIMYNKREEPSPAP 618
Query: 444 MDQDAFVVKDKFSRLPLKMD-----APEKVLSQAHGQARPVLDFLHEN----CWLDIMRQ 494
+ + S+L D + E ++++ + L LHEN C D+ +
Sbjct: 619 PARTGLRARKPPSQLGDHHDLVSQVSVEDLINETGTDIQTFLSALHENYPPSCHGDLFTE 678
Query: 495 TM 496
++
Sbjct: 679 SL 680
>gi|343428285|emb|CBQ71815.1| related to cell cycle checkpoint protein RAD17 [Sporisorium
reilianum SRZ2]
Length = 803
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 66/365 (18%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST----NVLVITG 185
S+ + LW+E+ P + +ELAV KKV +VR W E G +K + VL +TG
Sbjct: 104 SSYNDADSLWSERLAPHTGDELAVHPKKVAQVRTWLE---GAFSNKVAVAKYRKVLALTG 160
Query: 186 QAGVGKTATVRQIASH--LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
AG GK+ATVR +AS+ L + EW P+ + G+ + ++ F +F+ +
Sbjct: 161 SAGAGKSATVRALASNQDLDFDILEWHNDQPSFDPD-----NPGISF---IERFTDFLSK 212
Query: 244 IRRY-----------GSTSPSIPGESKSSA----ILLIDDLPVTN---GRTAF-----ER 280
++ +++ S+ ES +S ++L++DLP + + F +
Sbjct: 213 AAKFPTLDLQASGDDDASNSSLTLESAASTNRRRVILLEDLPNLHHLPTKQLFQASIEQH 272
Query: 281 LRQCLLLLVRS-THIPTAVVLTECGKADSVD------STAQSFEELQSILVDA------- 326
++Q + L R ++P +V+TE + D S+ ++ E + ++D
Sbjct: 273 IQQSIQLTARGFPNVPIVIVVTESTPREDQDRWAGDSSSGNTWRERIASIMDTRTALGEH 332
Query: 327 -----GARKVALNPITNGSIKRTLSKICRQEQYSLST-------EQIDLVAQASGGDIRQ 374
+V NP+ + + L + + S S + + +A+ S GD+R
Sbjct: 333 IRKHPAYTEVRFNPVAPTIVLKGLRRAIERASSSTSKTTSKVWLQLLQAIAEDSNGDLRA 392
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
A+ LQF + ++ + + GR+ +L+LFHALGK L+N
Sbjct: 393 AVNCLQFVGANSKHLETIAKQRGATKGQDLGKAMRKMMPLVSGRESSLALFHALGKVLYN 452
Query: 435 KRETD 439
KRE D
Sbjct: 453 KREGD 457
>gi|321458943|gb|EFX70002.1| hypothetical protein DAPPUDRAFT_113048 [Daphnia pulex]
Length = 535
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 42/389 (10%)
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITG 185
+DSA ST+ P + EL VQ+KKV EV+ W E+ S+ L++TG
Sbjct: 33 YDSARVKQSTESTECTS-TPVNSSELVVQKKKVAEVKHWLEQAFSKSQQ---GQFLLLTG 88
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTI----WQEYMHNCKTGLEYTSK----LDEF 237
G GK T+ + L + W+ P W+ +N E K D
Sbjct: 89 PPGCGKYQTLSVLCKELNIEILAWEEPIKHFEASEWEYEQYNPHHYREPKQKDVNFYDHL 148
Query: 238 ENFVERIRRYGS-----TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRST 292
E F+ER R+ + S+ S ILLI + P + ER LL T
Sbjct: 149 EEFLERANRFSTLKMKDAKGSVAHNSNMRKILLIKEFPPMIFKN-LERWHNILLKYSHRT 207
Query: 293 HIPTAVVLTECGKADSVDSTAQSFEELQSILVDA-GARKVALNPITNGSIKRTLSKICRQ 351
P +LT +S + ++L + V + N + + L ++ +
Sbjct: 208 RTPAVFILTSTKAFNSTQ-----LKLFPTVLSERLMMSTVNFTGLANTFVLKALQRVSLK 262
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEK-----A 406
+ + E I+ + + GD+R A+ ++ + + ++++ KP +K
Sbjct: 263 SKQATPPEVIEGIVGSCNGDLRSALNAMHW-------ITTSNVNVKKPPAYSKKRKLASV 315
Query: 407 DGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPE 466
+ + + RD +L HA+GK LH+KR + + + ++F RLPLK D E
Sbjct: 316 EKKDSLNTMYVRDGSLDFMHAIGKILHSKRLDQVQGSLPELPKHLLEEF-RLPLKEDVNE 374
Query: 467 --KVLSQAHGQARPVLDFLHENCWLDIMR 493
K + +A + VL +LH+N L R
Sbjct: 375 LTKNIDEASSK---VLLYLHQNYPLYFNR 400
>gi|345485401|ref|XP_003425263.1| PREDICTED: cell cycle checkpoint protein RAD17-like isoform 2
[Nasonia vitripennis]
Length = 474
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 148/364 (40%), Gaps = 75/364 (20%)
Query: 145 PRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGA 204
P+ +LAV R+K +E+ WF+E + + K +LV++G +G GKT ++ IA
Sbjct: 78 PQKASDLAVSRQKQQEINRWFKETVKEGK----PTLLVVSGPSGCGKTEALKVIAKENNF 133
Query: 205 RLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAIL 264
+ EW TP EY + G + FE+F+ R RYGS S S +L
Sbjct: 134 DIVEWITPMDQAMDEYNRTMRQG-------ERFEDFLIRATRYGSVL------SDSRRLL 180
Query: 265 LIDDLP--VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
L+ D+P +G+ F L Q R P V TE G + + + QS
Sbjct: 181 LVKDIPNSYIDGKDDFSSLLQKYCQYGRE---PLIFVNTETGNSKLMTTLFS-----QSN 232
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICR------QEQYSLSTEQIDLVAQASGGDIRQAI 376
G + +N T ++K + ++ ++ +ID V + GD+R A+
Sbjct: 233 RDRYGIDTININAATPTALKNVMKRVTTILNSKASHMLYVTQSKIDEVLSNTIGDVRSAL 292
Query: 377 TSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+L FSSLK K F E R+ETL L H +G+ ++ K+
Sbjct: 293 LNLIFSSLK-----------VKHKFESECT----------VREETLGLLHGIGRVINPKK 331
Query: 437 ETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQTM 496
+ + V D P+ + S + + F+HEN TM
Sbjct: 332 NVEG-----KSWKFVHD-----------PDDLASSFQTHSNTFIKFVHEN-----YMNTM 370
Query: 497 FYNL 500
+N+
Sbjct: 371 GFNM 374
>gi|345485399|ref|XP_003425262.1| PREDICTED: cell cycle checkpoint protein RAD17-like isoform 1
[Nasonia vitripennis]
Length = 467
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 147/364 (40%), Gaps = 75/364 (20%)
Query: 145 PRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGA 204
P+ +LAV R+K +E+ WF+E + + K +LV++G +G GKT ++ IA
Sbjct: 71 PQKASDLAVSRQKQQEINRWFKETVKEGK----PTLLVVSGPSGCGKTEALKVIAKENNF 126
Query: 205 RLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAIL 264
+ EW TP EY + G + FE+F+ R RYGS S S +L
Sbjct: 127 DIVEWITPMDQAMDEYNRTMRQG-------ERFEDFLIRATRYGSVL------SDSRRLL 173
Query: 265 LIDDLP--VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
L+ D+P +G+ F L Q R P V TE G + + + QS
Sbjct: 174 LVKDIPNSYIDGKDDFSSLLQKYCQYGRE---PLIFVNTETGNSKLMTTLFS-----QSN 225
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICR------QEQYSLSTEQIDLVAQASGGDIRQAI 376
G + +N T ++K + ++ ++ +ID V + GD+R A+
Sbjct: 226 RDRYGIDTININAATPTALKNVMKRVTTILNSKASHMLYVTQSKIDEVLSNTIGDVRSAL 285
Query: 377 TSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+L FSSLK ++ R+ETL L H +G+ ++ K+
Sbjct: 286 LNLIFSSLKVKHKFESECTV---------------------REETLGLLHGIGRVINPKK 324
Query: 437 ETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQTM 496
+ + V D P+ + S + + F+HEN TM
Sbjct: 325 NVEG-----KSWKFVHD-----------PDDLASSFQTHSNTFIKFVHEN-----YMNTM 363
Query: 497 FYNL 500
+N+
Sbjct: 364 GFNM 367
>gi|401838006|gb|EJT41823.1| RAD24-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 657
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 66/338 (19%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQ 186
S + + + + W EK+KP +LE++A+ +KK+++VR + L +K + VL+++G
Sbjct: 55 SPNVNDNGDEQWYEKFKPTNLEQVAIHKKKLKDVREALDAMFLPHAKHR----VLLLSGP 110
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKT---GLEYTSKLDEFENFVER 243
+G K+ +R+++ L + Y + ++ H+ T G + L + E+F E
Sbjct: 111 SGCSKSTVIRELSKVLVPK-YRKKSNVTSLRSNSSHSDLTEFRGDSIVNDLPQMESFSEF 169
Query: 244 IR--RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTH---IPTAV 298
++ RY S + +++LI+DLP R +Q +L + S+ P +
Sbjct: 170 LKSARYLVMS--------NLSLILIEDLPNVFHMGTRHRFQQLILQWLYSSEPLLPPLVI 221
Query: 299 VLTECGKADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKI 348
LTEC +S DS ++F E + + IL +++ NPI + +K+ L I
Sbjct: 222 CLTECEIPES-DSNYRTFGIDYTFSSETVMNKEILAHPRLKRIRFNPINSTLLKKHLKLI 280
Query: 349 CRQEQ--------YSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPN 400
C + +S E I+ +AQ + GDIR AIT+LQF + + +L IS
Sbjct: 281 CVENMALLKENKIWSKREEAINHIAQGT-GDIRSAITTLQFWATSSE-----ALPIST-- 332
Query: 401 FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRET 438
R+ T+S FHA+GK +H T
Sbjct: 333 -----------------RESTISYFHAIGKVIHGSHST 353
>gi|301118304|ref|XP_002906880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108229|gb|EEY66281.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 572
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 52/347 (14%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWA+ Y P ++++L V + KV+E+ W E F +L++ G G GK+ VR
Sbjct: 64 LWADLYAPETVDDLCVNKTKVQEISEWLERNASPISGVFQKRLLILCGPPGSGKSTAVRC 123
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGL--EYTSKLDEFENFVERIRRYG------- 248
IA LG + EW+ + Y + S +D+F +F+ R YG
Sbjct: 124 IAPKLGLLIKEWEDNSAAGKLNYERMLREDFWTPQVSSVDDFSDFIHRSSAYGALPVATS 183
Query: 249 ------------STSPSIPGESKSSA-----ILLIDDLPV--TNGRTAFE----RLRQCL 285
S + + G ++ + ++LI+ P + ++ +E R+ Q +
Sbjct: 184 RHTSTIGRKRRLSNTQQVYGNFQTPSVSAGQVILIESWPQSWSKDKSLYEEKLQRVYQHV 243
Query: 286 LLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTL 345
+ P + ++ + +D S + + ++ + +N +T+ +K+ L
Sbjct: 244 VDPAGGCRYPVVCIYSDV-QGSKIDLHHLSRKFSREVIHSPLTSVININAVTSAQLKKHL 302
Query: 346 SKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEK 405
S+ QE I + +S GD+R A+ LQ + PN + +
Sbjct: 303 SRAATQESCPCQPADIQNIIDSSNGDMRHALNMLQL--------------LQNPNVKKHR 348
Query: 406 ADGHGGFSIQFGRDETLSLFHALGKFLH-----NKRETDNLVKMDQD 447
+ RD LS FH +GK LH NK ++ +K D D
Sbjct: 349 ISETSSATSSSARDPFLSDFHVVGKLLHGKMLQNKSADESALKNDVD 395
>gi|241835591|ref|XP_002415039.1| cell cycle checkpoint protein rad17, putative [Ixodes scapularis]
gi|215509251|gb|EEC18704.1| cell cycle checkpoint protein rad17, putative [Ixodes scapularis]
Length = 445
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 139/319 (43%), Gaps = 47/319 (14%)
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
+L++ G AG GKTATV +A LG L+EW +P T W M ++ FE
Sbjct: 25 LLLLCGPAGAGKTATVLCLAGQLGLTLHEWASPAKTEWAPRMQG---------PVEAFEA 75
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVV 299
F+ + RY DLP R A + Q L R+ P V
Sbjct: 76 FLFQCSRYRPL-----------------DLPNAFLRDA-DAFHQVLRRYRRTCRTPLVFV 117
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ--EQYSLS 357
++E +D+++ E ++ + G K+A NP+ S+ + L+ + + +Y +S
Sbjct: 118 VSE--SSDNLEYRLFPRE----LVAELGVSKIAFNPVAPTSMSKVLAAVVDKATARYKVS 171
Query: 358 ----TEQIDLVAQASGGDIRQAITSLQ-FSSLKQDPMLNL-SLSISKPNFPEEKADG--- 408
+ ++ +A +S GD+R AI +LQ F S +Q P + + KP + DG
Sbjct: 172 HLPTPDDLEQIAASSAGDVRNAINALQFFCSAEQGPAGPMQPAAAKKPRRRRKPRDGPQG 231
Query: 409 -HGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEK 467
GG + RD +L LFH+LGK L+ KR+ + D D P + PE+
Sbjct: 232 EAGGAAPAGSRDCSLQLFHSLGKMLYCKRDPSRMA--DSDRLPKHMAHLEKPPATEVPEE 289
Query: 468 VLSQAHGQARPVLDFLHEN 486
V + A FLH N
Sbjct: 290 VFGRTQVSADMFSLFLHHN 308
>gi|392862268|gb|EAS37097.2| cell cycle checkpoint protein rad17 [Coccidioides immitis RS]
Length = 898
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 157/354 (44%), Gaps = 66/354 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
WAE++ P L+ELAV +KKV +V+ W + +G SK + +LV+ G AG GKT TV
Sbjct: 233 WAERFGPADLDELAVHKKKVADVQRWLVDVFMGRSKRR----ILVLKGPAGSGKTTTVSL 288
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPS---- 253
++ +G + EW + EY + Y S +F++F+ R ++ S S S
Sbjct: 289 LSKTIGYEIIEWKN---SSGSEY-----SSAGYVSTSAQFDDFLSRTDKFRSLSMSQDSL 340
Query: 254 -----IPGESKSSA----ILLIDDLP--VTNGRTAFERLRQCLLLLVRST---------- 292
I ES S+ I+LI++ P +++G ++ R L + +T
Sbjct: 341 SAKSIIKDESTPSSNRRRIILIEEFPTSLSHGSSSLMAFRSSLERYLATTVPSMGFHSRP 400
Query: 293 -------HIPTAVVLTEC--GKADSVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIK 342
P ++++E G ++ F L I G + NP+ I
Sbjct: 401 PRPDNESDTPIVIIVSETLLGTGAALSDNFTVFRLLGPEISNHPGVSIIEFNPVAPTFIT 460
Query: 343 RTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
+ L + ++E ++ L + A GDIR AI SL+F ++ D + S +++
Sbjct: 461 KALDLVLKKEARISKRRRVPGPAALKSFAEMGDIRSAIASLEFLCIRGDKDGDWSGTVAS 520
Query: 399 PNFPEEKADGHGGFSIQ----------FGRDETLSLFHALGKFLHNKRETDNLV 442
K G+ ++ R+ +L LFHA+GK ++NKRE ++
Sbjct: 521 ----RLKRGGNTVAALTNMEKESLVAITHRESSLGLFHAVGKVVYNKREDPSIT 570
>gi|320040317|gb|EFW22250.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 898
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 156/354 (44%), Gaps = 66/354 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
WAE++ P L+ELAV +KKV +V+ W + +G SK + +LV+ G AG GKT TV
Sbjct: 233 WAERFGPADLDELAVHKKKVADVQRWLVDVFMGRSKRR----ILVLKGPAGSGKTTTVSL 288
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPS---- 253
++ LG + EW + EY + Y S +F++F+ R ++ S S S
Sbjct: 289 LSKTLGYEIIEWKN---SSGSEY-----SSAGYVSTSAQFDDFLSRTDKFRSLSMSQDSL 340
Query: 254 -----IPGESKSSA----ILLIDDLP--VTNGRTAFERLRQCLLLLVRST---------- 292
I +S S+ I+LI++ P +++G ++ R L + +T
Sbjct: 341 SAKSIINDKSTPSSNRRRIILIEEFPTSLSHGSSSLMAFRSSLERYLATTVPSMGFHSRP 400
Query: 293 -------HIPTAVVLTEC--GKADSVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIK 342
P ++++E G ++ F L I G + NP+ I
Sbjct: 401 PRPDNESDTPIVIIVSETLLGTGAALSDNFTVFRLLGPEISNHPGVSIIEFNPVAPTFIT 460
Query: 343 RTLSKICRQEQYSLSTEQIDLVAQASG----GDIRQAITSLQFSSLKQDPMLNLSLSISK 398
+ L + ++E ++ A G GDIR AI SL+F ++ D + S +++
Sbjct: 461 KALDLVLKKEARISKRRRVPGPAALKGFAEMGDIRSAIASLEFLCIRGDKDGDWSGTVAS 520
Query: 399 PNFPEEKADGHGGFSIQ----------FGRDETLSLFHALGKFLHNKRETDNLV 442
K G+ ++ R+ +L LFHA+GK ++NKRE ++
Sbjct: 521 ----RLKRGGNTVAALTNMEKESLVAITHRESSLGLFHAVGKVVYNKREDPSIT 570
>gi|427797485|gb|JAA64194.1| Putative checkpoint rad17-rfc complex rad17/rad24 component,
partial [Rhipicephalus pulchellus]
Length = 520
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 161/359 (44%), Gaps = 51/359 (14%)
Query: 158 VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTP-TI 216
V++V F+E+L + + ++++ G AG GKTAT+R +A+ G + EW P T
Sbjct: 1 VDQVSRCFKEKL-KAPATNAGAIILLCGPAGSGKTATLRCLAAEEGFTVCEWINPISLTA 59
Query: 217 WQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRT 276
EY N G + +++EFE+F+ + RY S + G+S + ++LI+DLP R
Sbjct: 60 KTEYNPNWDFG-RSSGQVEEFEDFLFQSSRYASL---LTGDS-AKRVVLIEDLPNIFIRD 114
Query: 277 AFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPI 336
E L + L + R P +++ DS D ++++ + K+ N I
Sbjct: 115 V-ESLHRVLRICHRVAVAPLVFIIS-----DSSDKLEHRLFP-EALIKELDITKITFNAI 167
Query: 337 TNGSIKRTLSKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPML 390
+ + L + + + + + ID + AS GDIR AI +L+F Q +
Sbjct: 168 ATTFVTKALCALLDKAVKLQAITHEPTADDIDSIVAASNGDIRSAINALEFFCSPQQCIG 227
Query: 391 NL-SLSISKPNF-------------PEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ S + +K + P+ + G GRD L+LFH+LGK LH KR
Sbjct: 228 PVKSKTAAKRQWSGACKKRRKKAAKPDVRNCG-------IGRDVPLTLFHSLGKILHCKR 280
Query: 437 ETDNLVKMD-------QDAFV--VKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ + K D D V VKD + P +PE+V +A FLH N
Sbjct: 281 KQPDCSKTDGGTEASTGDLSVSSVKDP-DKNPATDISPEEVFERAAISGEAFALFLHHN 338
>gi|119195841|ref|XP_001248524.1| hypothetical protein CIMG_02295 [Coccidioides immitis RS]
Length = 878
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 157/354 (44%), Gaps = 66/354 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
WAE++ P L+ELAV +KKV +V+ W + +G SK + +LV+ G AG GKT TV
Sbjct: 233 WAERFGPADLDELAVHKKKVADVQRWLVDVFMGRSKRR----ILVLKGPAGSGKTTTVSL 288
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPS---- 253
++ +G + EW + EY + Y S +F++F+ R ++ S S S
Sbjct: 289 LSKTIGYEIIEWKN---SSGSEY-----SSAGYVSTSAQFDDFLSRTDKFRSLSMSQDSL 340
Query: 254 -----IPGESKSSA----ILLIDDLP--VTNGRTAFERLRQCLLLLVRST---------- 292
I ES S+ I+LI++ P +++G ++ R L + +T
Sbjct: 341 SAKSIIKDESTPSSNRRRIILIEEFPTSLSHGSSSLMAFRSSLERYLATTVPSMGFHSRP 400
Query: 293 -------HIPTAVVLTEC--GKADSVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIK 342
P ++++E G ++ F L I G + NP+ I
Sbjct: 401 PRPDNESDTPIVIIVSETLLGTGAALSDNFTVFRLLGPEISNHPGVSIIEFNPVAPTFIT 460
Query: 343 RTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
+ L + ++E ++ L + A GDIR AI SL+F ++ D + S +++
Sbjct: 461 KALDLVLKKEARISKRRRVPGPAALKSFAEMGDIRSAIASLEFLCIRGDKDGDWSGTVAS 520
Query: 399 PNFPEEKADGHGGFSIQ----------FGRDETLSLFHALGKFLHNKRETDNLV 442
K G+ ++ R+ +L LFHA+GK ++NKRE ++
Sbjct: 521 ----RLKRGGNTVAALTNMEKESLVAITHRESSLGLFHAVGKVVYNKREDPSIT 570
>gi|190405728|gb|EDV08995.1| cell cycle exonuclease [Saccharomyces cerevisiae RM11-1a]
Length = 659
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 156/342 (45%), Gaps = 74/342 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYE-------WDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR--RYG 248
++ L + + TP E+ +C + L + E+F E ++ RY
Sbjct: 122 LSKILVPKYRQNSNGTSFRSTPNEHKVTEFRGDC-----IVNDLPQMESFSEFLKGARYL 176
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGK 305
S + +++LI+DLP R +Q +L + S+ P + +TEC
Sbjct: 177 VMS--------NLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEI 228
Query: 306 ADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQE--- 352
++ D+ + F E + + IL+ +++ NPI + +K+ L IC Q
Sbjct: 229 PEN-DNNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKM 287
Query: 353 -----QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
+++ E ID +AQ +G DIR AIT+LQF A
Sbjct: 288 LKEKNKWNKRQEVIDYIAQETG-DIRSAITTLQFW-----------------------AT 323
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
G I R+ T+S FHA+GK +H T+N +M + F
Sbjct: 324 SSGSLPIS-TRESTISYFHAIGKVIHGSHSTNNDNEMINNLF 364
>gi|242798516|ref|XP_002483186.1| cell cycle checkpoint protein Rad17, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716531|gb|EED15952.1| cell cycle checkpoint protein Rad17, putative [Talaromyces
stipitatus ATCC 10500]
Length = 916
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 63/346 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W+++Y P L++LAV +KKV +VR W L G ++ K +LV+ G AG GKTATV
Sbjct: 258 WSDQYPPTLLDQLAVHKKKVADVRQWLSIALSGRTRHK----ILVLHGPAGCGKTATVSL 313
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS---TSPSI 254
++ L + +W P + + G +Y+S +F+ F+ ++ +G + S
Sbjct: 314 LSDELNFDIVDWKNP-------FGTDTGNG-QYSSLSSQFDYFLGQLNSFGGLDLSDSSA 365
Query: 255 PGESKS------------SAILLIDDLP--VTNGRTAFERLRQCLLLLVRS--------- 291
P SK+ ++LI++ P ++ G TA + L + S
Sbjct: 366 PSASKTHITKQTSSPSAQKRVILIEEFPANLSWGSTALSSFQTSLRRYLASSSSNSRNIF 425
Query: 292 -----THIPTAVVLTE----CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
T P ++++E A S + TA + + G + NPI +
Sbjct: 426 GNTPDTTPPIVIIISETMLGTSGATSENLTAHRLLGPE-VYTHPGTTTIEFNPIAPTFML 484
Query: 343 RTLSKICRQE------QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLN----- 391
+ L I R+E Q+ E + +++ GDIR AI++L+F L+ D
Sbjct: 485 KALQLILRKEANQSKRQWIPGIEVLKKLSEL--GDIRSAISALEFLCLRNDTTNQGWSGR 542
Query: 392 LSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
++ SK P + + R+ +L LFHA+GK ++NKR+
Sbjct: 543 VAWKSSKTTAPLTAMEKE-SLELITQRETSLGLFHAVGKVVYNKRD 587
>gi|6321021|ref|NP_011100.1| Rad24p [Saccharomyces cerevisiae S288c]
gi|418428|sp|P32641.1|RAD24_YEAST RecName: Full=Checkpoint protein RAD24
gi|603414|gb|AAB64700.1| Rad24p: Check point protein [Saccharomyces cerevisiae]
gi|285811807|tpg|DAA07835.1| TPA: Rad24p [Saccharomyces cerevisiae S288c]
gi|392299878|gb|EIW10970.1| Rad24p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 659
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 72/341 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYE-------WDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR--RYG 248
++ L + + TP E+ +C + L + E+F E ++ RY
Sbjct: 122 LSKILVPKYRQNSNGTSFRSTPNEHKVTEFRGDC-----IVNDLPQMESFSEFLKGARYL 176
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGK 305
S + +++LI+DLP R +Q +L + S+ P + +TEC
Sbjct: 177 VMS--------NLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEI 228
Query: 306 ADS--------VDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICRQE---- 352
++ +D T + + + IL+ +++ NPI + +K+ L IC Q
Sbjct: 229 PENDNNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKML 288
Query: 353 ----QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG 408
+++ E ID +AQ +G DIR AIT+LQF A
Sbjct: 289 KEKNKWNKRQEVIDYIAQETG-DIRSAITTLQFW-----------------------ATS 324
Query: 409 HGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
G I R+ T+S FHA+GK +H T+N +M + F
Sbjct: 325 SGSLPIS-TRESTISYFHAIGKVIHGSHSTNNDNEMINNLF 364
>gi|365765948|gb|EHN07451.1| Rad24p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 659
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 156/342 (45%), Gaps = 74/342 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKXR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYE-------WDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR--RYG 248
++ L + + TP E+ +C + L + E+F E ++ RY
Sbjct: 122 LSKILVPKYRQNSNGTSFRSTPNEHKVTEFRGDC-----IVNDLPQMESFSEFLKGARYL 176
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGK 305
S + +++LI+DLP R +Q +L + S+ P + +TEC
Sbjct: 177 VMS--------NLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEI 228
Query: 306 ADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQE--- 352
++ D+ + F E + + IL+ +++ NPI + +K+ L IC Q
Sbjct: 229 PEN-DNNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKM 287
Query: 353 -----QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
+++ E ID +AQ +G DIR AIT+LQF A
Sbjct: 288 LKEKNKWNKRQEVIDYIAQETG-DIRSAITTLQFW-----------------------AT 323
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
G I R+ T+S FHA+GK +H T+N +M + F
Sbjct: 324 SSGSLPIS-TRESTISYFHAIGKVIHGSHSTNNDNEMINNLF 364
>gi|256271307|gb|EEU06377.1| Rad24p [Saccharomyces cerevisiae JAY291]
Length = 659
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 72/341 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYE-------WDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR--RYG 248
++ L + + TP E+ +C + L + E+F E ++ RY
Sbjct: 122 LSKILVPKYRQNSNGTSLRSTPNEHKVTEFRGDC-----IVNDLPQMESFSEFLKGARYL 176
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGK 305
S + +++LI+DLP R +Q +L + S+ P + +TEC
Sbjct: 177 VMS--------NLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEI 228
Query: 306 ADS--------VDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICRQE---- 352
++ +D T + + + IL+ +++ NPI + +K+ L IC Q
Sbjct: 229 PENDNNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKML 288
Query: 353 ----QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG 408
+++ E ID +AQ +G DIR AIT+LQF A
Sbjct: 289 KEKNKWNKRQEVIDYIAQETG-DIRSAITTLQFW-----------------------ATS 324
Query: 409 HGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
G I R+ T+S FHA+GK +H T+N +M + F
Sbjct: 325 SGSLPIS-TRESTISYFHAIGKVIHGSHSTNNDNEMINNLF 364
>gi|401625971|gb|EJS43943.1| rad24p [Saccharomyces arboricola H-6]
Length = 659
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 64/328 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W E+YKP LE +A+ +KK+++VR E L ++K + +L+++G +G K+ ++Q
Sbjct: 66 WYERYKPIQLEHVAIHKKKLKDVRDALEAMFLPNAKHR----ILLLSGPSGCSKSTVIKQ 121
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKT---GLEYTSKLDEFENFVERIR--RYGSTSP 252
++ L + Y T ++ H+ T G + L + E+F E ++ RY +S
Sbjct: 122 LSKVLVPK-YRRKTQVTSLRSSSNHSDVTEFRGDSIVNDLPQMESFSEFLKSTRYLVSS- 179
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTH---IPTAVVLTECG----- 304
+ +++LI+DLP R R +Q +L + S+ P + LTEC
Sbjct: 180 -------NLSLILIEDLPNVFHRDTRYRFQQLILQWLYSSEPLLPPLVICLTECEIPEND 232
Query: 305 ---KADSVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICRQ--------E 352
A +D T + + + IL +++ NPI + +K+ L IC +
Sbjct: 233 NDYHAFGIDYTFSAETVMNKEILTHPRLKRIKFNPINSTLLKKHLKLICTKNMALLKENN 292
Query: 353 QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGF 412
++S + I+ +A + GDIR AIT+LQF + ++ L IS
Sbjct: 293 KWSKKEKVINQIALET-GDIRSAITTLQFWATSRE-----GLPIS--------------- 331
Query: 413 SIQFGRDETLSLFHALGKFLHNKRETDN 440
R+ T+S FHA+GK +H T++
Sbjct: 332 ----TRESTISYFHAIGKVIHGSHNTED 355
>gi|207345781|gb|EDZ72489.1| YER173Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146102|emb|CAY79362.1| Rad24p [Saccharomyces cerevisiae EC1118]
Length = 659
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 156/342 (45%), Gaps = 74/342 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYE-------WDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR--RYG 248
++ L + + TP E+ +C + L + E+F E ++ RY
Sbjct: 122 LSKILVPKYRQNSNGTSFRSTPNEHKVTEFRGDC-----IVNDLPQMESFSEFLKGARYL 176
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGK 305
S + +++LI+DLP R +Q +L + S+ P + +TEC
Sbjct: 177 VMS--------NLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEI 228
Query: 306 ADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQE--- 352
++ D+ + F E + + IL+ +++ NPI + +K+ L IC Q
Sbjct: 229 PEN-DNNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKM 287
Query: 353 -----QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
+++ E ID +AQ +G DIR AIT+LQF A
Sbjct: 288 LKEKNKWNKRQEVIDYIAQETG-DIRSAITTLQFW-----------------------AT 323
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
G I R+ T+S FHA+GK +H T+N +M + F
Sbjct: 324 SSGSLPIS-TRESTISYFHAIGKVIHGSHSTNNDNEMINNLF 364
>gi|328851001|gb|EGG00160.1| hypothetical protein MELLADRAFT_93839 [Melampsora larici-populina
98AG31]
Length = 719
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 183/474 (38%), Gaps = 115/474 (24%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVR 196
LW+EKY P+ ELA+ KK E ++ W +E L G + + +L++ G AG GK+A +R
Sbjct: 124 LWSEKYTPKKPSELAIHPKKTELIQGWLKEALTGSTSIRKYRRLLILGGPAGSGKSAIIR 183
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT---------------------SKLD 235
+A+ + L PTPT+ + KT +E S+L
Sbjct: 184 SLAAQ-PSELQSDRKPTPTLNRNGKSKAKTDVEIQPIGYQILEWQEGGGDPTSLNFSRLS 242
Query: 236 EFENFVERIRRYG----------STSPSIPGESKSS----------------AILLIDDL 269
EF ++ R YG +T P ES ++ +LL+D+L
Sbjct: 243 EFPIWLMRA-SYGPTLLFDDPQDTTQNPTPLESSNNLKASQSSISSQSTPTRKLLLVDEL 301
Query: 270 PVTNGRTAFERLRQCLLLLV---RSTHIPTAVVLTECG------KADSVDSTAQSFEEL- 319
P + + L L + RS+ P V++++ AD+V S F +
Sbjct: 302 PNLHHDQTLSAFCEALKLHLNSTRSSTPPLVVIISDTTVRPGEEGADNVLSNQAQFGQRG 361
Query: 320 -----------------QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS------- 355
Q IL + LN + +K+ L+++ E+
Sbjct: 362 GRFNSEEKGMSVRSLISQDILEHPSCSFIKLNSVNKTMMKKMLNRVLEIEEEGVVGIPKR 421
Query: 356 --LSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD------ 407
L +++D + S GDIR A +LQF + Q P L S F D
Sbjct: 422 KKLGLKELDEIIGISNGDIRSAFNNLQF--MVQLPGLGKPYGSSSSKFKVLDQDDGLKNR 479
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEK 467
G S+ R+ +L LFH LGK L+NKR + D +KDK R D P
Sbjct: 480 GKKVESLLGSRESSLVLFHGLGKVLYNKR----MGWGDDPVEDLKDKRFRPTKPEDVP-- 533
Query: 468 VLSQAHGQARPVLDFLHENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLG 521
DFLHE + +T L + ++Y++ L Q LG
Sbjct: 534 -------------DFLHEFSRRQL--KTDIEALYSENGMSLDYFMGYLFQNYLG 572
>gi|151944890|gb|EDN63149.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 659
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 156/342 (45%), Gaps = 74/342 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYE-------WDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR--RYG 248
++ L + + TP E+ +C + L + E+F E ++ RY
Sbjct: 122 LSKILVPKYRQNSNGTSFRSTPNEHKVTEFRGDC-----IVNDLPQMESFSEFLKGARYL 176
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGK 305
S + +++LI+DLP R +Q +L + S+ P + +TEC
Sbjct: 177 VMS--------NLSLILIEDLPNLFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEI 228
Query: 306 ADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQE--- 352
++ D+ + F E + + IL+ +++ NPI + +K+ L IC Q
Sbjct: 229 PEN-DNNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKM 287
Query: 353 -----QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
+++ E ID +AQ +G DIR AIT+LQF A
Sbjct: 288 LKEKNKWNKRQEVIDYIAQETG-DIRSAITTLQFW-----------------------AT 323
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
G I R+ T+S FHA+GK +H T+N +M + F
Sbjct: 324 SSGSLPIS-TRESTISYFHAIGKVIHGSHSTNNDNEMINNLF 364
>gi|307178251|gb|EFN67036.1| Cell cycle checkpoint protein RAD17 [Camponotus floridanus]
Length = 468
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 72/362 (19%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
E +P+ L ELAV R+K E+ WF+ + K ++LV++G +G GKT ++ +A
Sbjct: 65 EACEPQKLSELAVSRQKQNEISNWFQYKAS----KRQPSMLVLSGPSGCGKTVAIKLLAK 120
Query: 201 HLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKS 260
G + EW TP I E + G D+FE+ + R RY + + S
Sbjct: 121 ENGFDIIEWITPIDQIEDENKRIMRQG-------DKFEDHMIRATRYRTVLSNC-----S 168
Query: 261 SAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTAQSFE 317
+LL+ DLP E + +L+ + I P + TE G + + +
Sbjct: 169 KQLLLVKDLP----NVYHEDHKSFFMLIEKYFQIGKEPVIFICTETGNSRLMQTLFAP-- 222
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICR-----QEQYSLSTEQIDLVAQASGGDI 372
I G +++N T ++K L ++ ++ ID + S GD+
Sbjct: 223 ---DIREKFGIDLISVNATTQAAMKTMLKRVSGVLNSIAGDMLYVSQHIDEILSNSVGDV 279
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFL 432
R A+ +L F SLK PE G R+ETL L H +G+
Sbjct: 280 RSAVLNLIFISLK---------------VPERHLKSECGL-----REETLGLLHGIGRVT 319
Query: 433 HNKRETD-NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDI 491
+ K++ D N +K D PE++ + Q+ + FL EN +L+
Sbjct: 320 NPKKKLDGNSLKFVHD-----------------PEEIAAFFQSQSVVFVQFLQEN-YLNT 361
Query: 492 MR 493
+R
Sbjct: 362 IR 363
>gi|255718741|ref|XP_002555651.1| KLTH0G14256p [Lachancea thermotolerans]
gi|238937035|emb|CAR25214.1| KLTH0G14256p [Lachancea thermotolerans CBS 6340]
Length = 638
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 163/351 (46%), Gaps = 75/351 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W K++PR+L++LA+ ++K+++VR + + G+S+ + +L++TG AG K+ +V
Sbjct: 59 WYLKHRPRNLQDLALHKQKLQDVRDVLQAMISGESEHR----ILLLTGPAGCSKSTSVHL 114
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY--------TSKLDEFENFV-ERIRRYG 248
++ L + + T T++Q + +EY +SKLD F++F+ + + + G
Sbjct: 115 LSEEL---VQNYREKTCTMFQMRESAAPSVVEYDSNNYSLGSSKLDHFDDFLGQSMYKIG 171
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGK 305
P++ I+LI+D P +Q LL + S+ P + LTEC
Sbjct: 172 ---PNL-------TIILIEDFPNVFNPQTRNLFQQSLLRWLYSSQKALPPLVISLTECA- 220
Query: 306 ADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
S ++T+ F E + + +L G +++ NPI +K+ L +C +E+ +
Sbjct: 221 IQSTETTSSFFSVDTQFICETVLGREVLSHPGVKRIKYNPINKTLLKKHLKNVCVKEREA 280
Query: 356 LST---EQIDLVAQA---SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGH 409
E+ ++ + GDIR AI++LQ + K+
Sbjct: 281 FFPGKWEKREVFIKKIIEHCGDIRSAISALQLWA---------------------KSGAQ 319
Query: 410 GGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPL 460
F I R++++S FH LGK L+ ++TD+ D + D + PL
Sbjct: 320 SAFDID-TREQSVSYFHGLGKLLYGSKDTDS------DNNTINDLMASTPL 363
>gi|349577834|dbj|GAA23002.1| K7_Rad24p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 659
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 157/342 (45%), Gaps = 74/342 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EK+KP LE++A+ ++K+++V+ + L ++K + +L+++G +G K+ +++
Sbjct: 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHR----ILLLSGPSGCSKSTVIKE 121
Query: 198 IASHLGARLYE-------WDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR--RYG 248
++ L + + TP E+ +C + L + E+F E ++ RY
Sbjct: 122 LSKILVPKYRQNSNGTSLRSTPNEHKVTEFRGDC-----IVNDLPQMESFSEFLKGARYL 176
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTH---IPTAVVLTECGK 305
S + +++LI+DLP R +Q +L + S+ P + +TEC
Sbjct: 177 VMS--------NLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEI 228
Query: 306 ADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQ---- 351
++ D+ + F E + + IL+ +++ NPI + +K+ L IC Q
Sbjct: 229 PEN-DNNYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKM 287
Query: 352 ----EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
+++ E ID +AQ + GDIR AIT+LQF SL IS
Sbjct: 288 LKEKNKWNKRQEVIDYIAQET-GDIRSAITTLQFWVTSSG-----SLPIST--------- 332
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
R+ T+S FHA+GK +H T+N +M + F
Sbjct: 333 ----------RESTISYFHAIGKVIHGSHSTNNDNEMINNLF 364
>gi|258575489|ref|XP_002541926.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902192|gb|EEP76593.1| predicted protein [Uncinocarpus reesii 1704]
Length = 899
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 164/387 (42%), Gaps = 74/387 (19%)
Query: 103 AIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVR 162
A + + V RFL PS+ + +P ++ + W E++ P +L+ELAV +KKV +V+
Sbjct: 201 ARESKPVKRFLLPSQADLGTSP----STVVGDQLKPWTERFVPTNLDELAVHKKKVADVQ 256
Query: 163 AWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH 222
W + + VLV+ G AG GKT T+ ++ LG + EW + EY+
Sbjct: 257 KWLVDVFTSRSKR---RVLVLKGPAGSGKTTTISLLSKALGYDIIEWKN---SSGMEYL- 309
Query: 223 NCKTGLEYTSKLDEFENFVERIRRYGSTS---------------PSIPGESKSSAILLID 267
TG Y S +F++F+ R ++ + + P+ PG + ++LI+
Sbjct: 310 --STG--YISMGAQFDDFLGRSGKFSNLTLSEDPTASQFTIDENPTPPGNHRR--VILIE 363
Query: 268 DLP--VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
+ P ++ G + R L + + +P+ V ++D S +++L
Sbjct: 364 EFPTSLSQGSSTLLGFRSALQRYL-AAAVPSMGVKGWLPQSDIGSSPPIIIIVSETLLGT 422
Query: 326 A---------------------GARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID-- 362
G + NP+ I + L + ++E S +I
Sbjct: 423 GAALSDNFTVYRLLGPEISNHPGVSIIEFNPVAPTFITKALDLVLKKEARSSGRRRIPGP 482
Query: 363 --LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ----- 415
L A GDIR AI S++F L+ D N S +++ K G ++
Sbjct: 483 SALKGFADMGDIRSAIASMEFLCLRGDEDGNWSGTVAS----RIKKSGRSAAALTNMEKE 538
Query: 416 -----FGRDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+GK ++NKRE
Sbjct: 539 SLLAITHRESSLGIFHAVGKVVYNKRE 565
>gi|327305395|ref|XP_003237389.1| hypothetical protein TERG_02109 [Trichophyton rubrum CBS 118892]
gi|326460387|gb|EGD85840.1| hypothetical protein TERG_02109 [Trichophyton rubrum CBS 118892]
Length = 926
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 180/422 (42%), Gaps = 67/422 (15%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQ 186
S + + + + WAE++ P +L+ELAV ++KV +V+ W E +G S+ ++LV+ G
Sbjct: 267 SPAPAQAAGKPWAEQFAPVNLDELAVHKRKVADVQNWLNEVFIGRSR----RSILVLKGP 322
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
AG GKT T+ ++ LG + EW T EY + Y S +F++F+ R +
Sbjct: 323 AGSGKTTTISLLSKALGYEIVEWRNSAGT---EY-----SAQGYASAGTQFDDFLGRGEK 374
Query: 247 YGSTSPSIPGESKSSA------------ILLIDDLP--VTNGRTAFERLRQCLL------ 286
Y + GE+ S++ I+L+++ P ++ G R LL
Sbjct: 375 YNCL--ELDGEASSTSSSSAALQSSKRRIMLVEEFPSSLSPGSPGLTAFRSALLRHAASS 432
Query: 287 -------LLVRSTHIP-TAVVL----TECGKADSVDSTAQSFEELQSILVD-AGARKVAL 333
+ R T P T VV+ T G S + L L + G +
Sbjct: 433 FSSIAARIAARPTETPNTPVVIIVSETLLGDGTSFSDSFTVHRLLGPELSNHPGVSIIEF 492
Query: 334 NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ----ASGGDIRQAITSLQFSSLKQ--- 386
NPI + + L + ++E ++I A A GD+R AI+SL+F L+
Sbjct: 493 NPIAPTFLTKALDLVLKKEARLSHRKRIPGPAVLKRFAEMGDVRSAISSLEFICLQGGDY 552
Query: 387 ---DPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVK 443
MLN S A + R+ +L +FHA+GK ++NKRE +
Sbjct: 553 EGYSGMLNCRPKRSGKTAVPPTAMEAETLQMVTQREASLGIFHAVGKVMYNKREEPSPAT 612
Query: 444 MDQDAFVVKDKFSRLPLKMD-----APEKVLSQAHGQARPVLDFLHEN----CWLDIMRQ 494
+ + ++L + D + E ++++ + L LHEN C D+ +
Sbjct: 613 STRTGSRARKPAAQLGDRHDLVSQVSVEDLINETGTDIQTFLSALHENYPPSCHGDLFTE 672
Query: 495 TM 496
++
Sbjct: 673 SL 674
>gi|412989242|emb|CCO15833.1| cell cycle checkpoint protein RAD17 [Bathycoccus prasinos]
Length = 614
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 168/413 (40%), Gaps = 84/413 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY PRS E+ V +KK E + + E++ SK VL + G +G GK +T +
Sbjct: 48 WPEKYHPRSCTEVVVPKKKAEVMIDFLEKQ--SSKTSKRPAVLFLVGPSGCGKASTFVTL 105
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKT-----GLEYTSKLDEFENFVERIRRYGS-TSP 252
A + EW P P+I+ E + G YTSK+++F NF+ R +Y + S
Sbjct: 106 AKEKCFSVLEWKPPAPSIYNENVSTTNENRFDGGDAYTSKIEDFVNFLNRSTKYNAIVSN 165
Query: 253 SIPGESKSS--AILLIDDLPVT-----NGRTAFERLRQCLLLLVRSTHIPTAV-VLTECG 304
I G +K S ++LI D+P GR+ F + L+ IP ++ G
Sbjct: 166 VIGGGNKRSRGTVILIRDVPTVAQGDERGRSKFVASIEGLVSSSAKNRIPVVFSSSSDVG 225
Query: 305 KADSV----DSTAQSFEELQSILVDAGAR--------------KVALNPITNGSIKRTLS 346
+ D V +S + + ++ I+ + R ++ LNP T S++
Sbjct: 226 EGDFVSFGNESKSDGLKFVRRIIHEKLERMGAQNRQNLSEYLVEIKLNPCTKKSLEDAAK 285
Query: 347 KICRQEQYSLST---------------------------EQIDLVAQASGGDIRQAITSL 379
++ E S T E ++ + GD+R + SL
Sbjct: 286 RVINLEFSSEMTKNGSFLESLPDEDDDFDGLSSIKSGMLENVENLVLECNGDVRSLMFSL 345
Query: 380 QF------SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
Q + N + K N E + D G + ++ ++SLFHALGKFL+
Sbjct: 346 QLLYARIVGDMYAKRKKNEKKNTKKRNREEARIDNADG-DKERKKESSISLFHALGKFLY 404
Query: 434 NKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
KR K DA + + + ++DA K V+DFL EN
Sbjct: 405 AKR------KPSDDALESEVEITLNRARVDAAPKT----------VIDFLFEN 441
>gi|302849083|ref|XP_002956072.1| hypothetical protein VOLCADRAFT_107059 [Volvox carteri f.
nagariensis]
gi|300258577|gb|EFJ42812.1| hypothetical protein VOLCADRAFT_107059 [Volvox carteri f.
nagariensis]
Length = 1153
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 140/361 (38%), Gaps = 92/361 (25%)
Query: 168 RLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN-CKT 226
RL + V++G AG GK+ +R +A G + EW P P +W EY +
Sbjct: 431 RLWQGSRALPCGLAVLSGPAGCGKSTCLRVLAEATGFEVVEWTPPAPMMWNEYQYQRSAA 490
Query: 227 GLEYT--------SKLDEFENFVERIR--------------------------------- 245
G EY SKLD+FE+FV R +
Sbjct: 491 GPEYGGGPPASYQSKLDDFESFVSRSKYPSLALTSTGAAALVSGESASGRAAPGGSQQTG 550
Query: 246 ----RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLT 301
+T+P G + +LL++DLP T+ RL L L + P +V T
Sbjct: 551 AVTTHRSATAPGSCGGAPRPKLLLVEDLPHTHDTERRLRLASALRDLAATARGPVVLVAT 610
Query: 302 EC-GKADSVDSTAQS-----------------FEELQSILVDAGARKVALNPITNGSIKR 343
E G+A +++ + L AGA ++ NP+T +I +
Sbjct: 611 EVEGQATGGGERGGGGGGAPDGGGSMGGAKGLHKDILAALQAAGATAISFNPVTANNIAK 670
Query: 344 TLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
L ++ E + L +A+A+ GD+R A+ +LQ +++ Q + + S
Sbjct: 671 LLMRVAAAEGHELMPATAMGLAEAADGDVRSALQALQMNAMLQKAARRGATAASGGRGGT 730
Query: 404 EKA----DGHGGFS-------IQFGRDETLS-----------------LFHALGKFLHNK 435
+ G+G + ++ GR + L+ LFHALGKFLHNK
Sbjct: 731 SGSRRSKKGNGKVTAASATAQLRVGRQQALTPGEVARLAAAQRDLGLPLFHALGKFLHNK 790
Query: 436 R 436
R
Sbjct: 791 R 791
>gi|121714775|ref|XP_001274997.1| cell cycle checkpoint protein rad17 [Aspergillus clavatus NRRL 1]
gi|119403153|gb|EAW13571.1| cell cycle checkpoint protein rad17 [Aspergillus clavatus NRRL 1]
Length = 770
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 141/336 (41%), Gaps = 54/336 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA++Y P +L ELAV ++KV EV+ W + K +LV+ G AG GKT T+ +
Sbjct: 145 WAQRYPPSNLNELAVHKRKVTEVQTWLSNAFTMNAKK----LLVLRGPAGSGKTTTISLL 200
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG-- 256
+ L L EW P T + YTS +F+ F+ R R S
Sbjct: 201 SDFLDFDLLEWKNPPATGFSTE--------GYTSIAAQFDEFLSRSNRLSGLELSANNLK 252
Query: 257 --ESKSSA------ILLIDDLPV-----TNGRTAFE-RLRQCLLLLVRSTHIPTAVVLTE 302
E+K + I+LI++ P + +AF L++ L + IP + ++
Sbjct: 253 VDETKRTIHHPRKRIVLIEEFPAVIRLGSPSLSAFRLSLQRYLAVSSAPNSIPRSPIVII 312
Query: 303 CGKADSVDSTAQSFEELQS-------ILVDAGARKVALNPITNGSIKRTL----SKICRQ 351
SVDS + + L + IL + N I + + L K R
Sbjct: 313 VSDT-SVDSASSYMDNLTAHRLLGVDILNHLSTTVIDFNSIAPTIMYKALELVVEKNARS 371
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGG 411
+ + + L + GDIR AI+SL+F +K + N + S + K
Sbjct: 372 SKSARRPGRNILKNISEAGDIRSAISSLEFIFVKNEAFENYARHFSA----KAKRPAGRN 427
Query: 412 FSIQFG----------RDETLSLFHALGKFLHNKRE 437
SI G R+ +L LFHA+GK ++NKRE
Sbjct: 428 TSITPGEEEVLKSISQREASLGLFHAVGKIIYNKRE 463
>gi|378731453|gb|EHY57912.1| cell cycle checkpoint protein [Exophiala dermatitidis NIH/UT8656]
Length = 911
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 154/367 (41%), Gaps = 52/367 (14%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQL--WAEKYKPRSLEELAVQRKKVEEVRAWFEER 168
RF + P H S + Q WA++Y P +L+EL V +KKV V+ W + +
Sbjct: 187 RFFKTAPAPSSSQPAHKSGTGHVPEVQYLPWADRYGPSNLDELVVHKKKVSNVQGWLQGK 246
Query: 169 LGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGL 228
+ ++ VLV+ G AG GKT T+ +A +G +L W P + G
Sbjct: 247 ISGRNNQ---KVLVLKGPAGSGKTTTLSLLAKAMGLQLVTWHNPA---------VSELGT 294
Query: 229 EYTSKLDEFENFVERIRRYGS---TSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQ 283
+S +FE F+ R R+GS + + S +L++++ P T R +A + R
Sbjct: 295 STSSIAHQFEEFLNRGGRFGSLVFDNDQATDTASSQRVLVVEEFPATISRQSSALQSFRS 354
Query: 284 CLL-LLVRSTHIPTA----------VVLTECGKADSVDSTAQSFEELQ----SILVDAGA 328
+L L RS P+ V++ S + + SF + IL
Sbjct: 355 VILQFLARSKATPSGFSGTDNLPPLVMIISETLLSSATAISDSFTAHRLLGPEILNHPFV 414
Query: 329 RKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ----ASGGDIRQAITSLQFSSL 384
+ NP+ + + + L + ++E ++ A A GD+R A+ SL+F +
Sbjct: 415 TVMEFNPVASTFVTKALDLVMQKEARDSLRRRVPGPAVIQRLAEMGDVRSAVNSLEFLCV 474
Query: 385 KQDPMLNL-------SLSISKPNFPEEKADG-------HGGFSIQFGRDETLSLFHALGK 430
+ +++++ ++K D I R+ TL +FHA GK
Sbjct: 475 RGSGAGGSGSADWSGTVAVTAAAKTKKKKDSAVLTEMEKNSLQIVTRRETTLDMFHAAGK 534
Query: 431 FLHNKRE 437
++NKRE
Sbjct: 535 VVYNKRE 541
>gi|170035055|ref|XP_001845387.1| cell cycle checkpoint protein rad17 [Culex quinquefasciatus]
gi|167876845|gb|EDS40228.1| cell cycle checkpoint protein rad17 [Culex quinquefasciatus]
Length = 530
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 34/321 (10%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFE--ERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
W+ P+ L +LAV KK+EE++ W + +R+ K +L+I+G G GK+ ++
Sbjct: 80 WSVDLAPKKLADLAVHPKKLEEIQHWLKTYDRV---KGTEPVAILLISGPPGCGKSTAIK 136
Query: 197 QIASHLGARLYEWDTPTPT-IWQEYMHNCKTGLEYTS----KLDEFENFVERIRRYGSTS 251
+ LG + EW TP ++ ++ + G E + + +FE F+ + RY S
Sbjct: 137 IVTEELGYEVTEWTTPVDVDMFFHDNYDFEGGREEVTYRENRKTQFEKFLYKSSRYCSI- 195
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+ +SK +LL+ D+P R E R L R P + TE +D
Sbjct: 196 --LEMDSKEK-LLLVKDIPNVFLRDP-EAFRSTLETYQRLGASPLVFIATETSN-KKLDI 250
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICR-------QEQYSLST-EQIDL 363
F ++L D + N ++ +K+ + ++ QY + + ID
Sbjct: 251 VFNLFTP--AVLNDFKVHHITFNAVSTTLMKKAIKRLTSLMVGPEMSRQYRVPPQDMIDS 308
Query: 364 VAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ-------F 416
V +S GD+R +L F+SLK P L+ I+ GG +
Sbjct: 309 VVLSSQGDLRSVTLNLHFASLKNAPRLSTE-QINAGVVLNSSGVATGGRGKKKESKLKSV 367
Query: 417 GRDETLSLFHALGKFLHNKRE 437
G E+L+LFHALG+ H K E
Sbjct: 368 GCAESLTLFHALGRVFHPKME 388
>gi|345569972|gb|EGX52797.1| hypothetical protein AOL_s00007g133 [Arthrobotrys oligospora ATCC
24927]
Length = 862
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 145/340 (42%), Gaps = 52/340 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
+ WA+KY P S +LAV ++KV++V++W E + S +LV++G +G GKTAT+
Sbjct: 235 KTWADKYAPTSTADLAVHKRKVDDVKSWLEAVF---RGVSSKRLLVLSGPSGTGKTATIT 291
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+AS L + +W+ P+ H+ + S +FE F+ R YG+ +
Sbjct: 292 ALASELDFDILKWENPS-------QHDIGGDGIFESLNAKFEEFMGRGMGYGALPLVVES 344
Query: 257 ESKSSA---------------ILLIDDLP--------VTNGRTAFERLRQCLLLLVRSTH 293
S+ A ++L++DLP + +F L +
Sbjct: 345 GSRGKASSKQMEDPIDPDRRKVILLEDLPNIFSSSSAGSAAMMSFRGAIHNFLATPQDGE 404
Query: 294 IPTAVVLTECGKADSVDSTAQSFEELQSILVD-AGARKVALNPITNGSIKRTLSKICRQE 352
+ ++++E S ++ L L++ G + N I G +++ L KI E
Sbjct: 405 LACILIISENLTTQSNATSITPHRLLGPQLLNHRGTTSITFNKIAAGIMQKALEKIVDTE 464
Query: 353 QYSLSTEQID----LVAQASGGDIRQAITSLQF--------SSLKQDPM----LNLSLSI 396
++ L + GDIR AI +L+F S+ K PM + S+
Sbjct: 465 MRMKGIKETPSPGLLAGIGACGDIRSAINTLEFMMVGRGKGSNKKLVPMPKTKRKIGRSM 524
Query: 397 SKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
S P E Q R+ +L +FHA+GK + NKR
Sbjct: 525 SDWGQPSESEKLTLELITQ--REASLGIFHAVGKIVWNKR 562
>gi|324508336|gb|ADY43520.1| Cell cycle checkpoint protein RAD17 [Ascaris suum]
Length = 643
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 158/377 (41%), Gaps = 72/377 (19%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-FEERLGDSKDKFSTNVLVITGQAGV 189
A SS + +++ P ++E LAV KKV++VR W R G + K +L++TG G
Sbjct: 144 AQSSCYESLIDRFPPTNVEHLAVHSKKVDQVREWMLNHRDGMKRSK----ILLLTGPCGS 199
Query: 190 GKTATVRQIASHLGARLYEWDTPTPTIWQEYM--HNCKTGLEYTSKLDEFENFVERIRRY 247
GKTATV+ + S L +L EW++P E+ N + L S++ F +F++ + R
Sbjct: 200 GKTATVKVLCSELRMKLVEWESPDH---YEFAVDENGEEILCEQSQVRVFADFLKSVDRN 256
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGR---------TAFERLRQCLLLLVRSTHIPTAV 298
+S + ++LI+ LP R + +C+ + V S+
Sbjct: 257 SL------DDSCAQRVVLIEHLPNIFYREPGLLHSLLCTYTLYSRCMFIFVLSS------ 304
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+ C + + F S+L D V NP + + + +I + + ++
Sbjct: 305 -IESCWTLNP----RRLFP--MSMLRDLHFDTVTFNPSALTFLSKAIRRILSELKIKATS 357
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGR 418
QI +A+++ GDIR AI +LQ +L +I FG
Sbjct: 358 TQIKYIAESAAGDIRCAINNLQLCIGDDGQLLK--------------------DAILFGS 397
Query: 419 DETLSLFHALGKFLHNKR---------ETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVL 469
FH++G+ LH KR E +NL+ ++++F R D E V+
Sbjct: 398 SSQTDPFHSIGRILHGKRAEQDSNEWLECENLLSKR-----LRERFHRPRPPKDVLEDVI 452
Query: 470 SQAHGQARPVLDFLHEN 486
+ + +L E+
Sbjct: 453 QKTAMSGDNIAAYLEEH 469
>gi|296194409|ref|XP_002744995.1| PREDICTED: cell cycle checkpoint protein RAD17 [Callithrix jacchus]
Length = 653
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 175/442 (39%), Gaps = 96/442 (21%)
Query: 93 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA 152
KN P +LE + G + + GL N + S + W +KYKP
Sbjct: 50 KNGPSTLESNIFPAGKRGNLSSLEQIYGLEN-----SEEYLSGNEPWVDKYKP------- 97
Query: 153 VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
E G S +L+ITG G GKT T++ ++ LG ++ EW P
Sbjct: 98 --------------ETQGGS-------ILLITGPPGCGKTTTIKILSKELGIQVQEWINP 136
Query: 213 TPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILL 265
+Q + + N ++ Y S++ F+ F+ R +Y I+L
Sbjct: 137 VLPDFQKDDFKEVFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIIL 196
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++DLP R + L + L V+ P ++++ D+ Q + I +
Sbjct: 197 VEDLPNQFYRDS-HTLHEVLRKYVKIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEE 251
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAITS 378
+ NP+ + + L++I E + ++L+ Q GDIR AI S
Sbjct: 252 CCISNINFNPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINS 311
Query: 379 LQFS---------------SLKQDPMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDET 421
LQFS SLK D +L+ S KP+ F ++ G G+D +
Sbjct: 312 LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIG------GKDVS 365
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMD---------APEKVLSQA 472
L LF ALGK L+ KR + L ++D SRLP + PE+V+ +
Sbjct: 366 LFLFRALGKILYCKRTS--LTELDS---------SRLPSHLSEYERDTLLVEPEEVVEMS 414
Query: 473 HGQARPVLDFLHENCWLDIMRQ 494
H +LH+N ++D +
Sbjct: 415 HMPGDLFNLYLHQN-YIDFFME 435
>gi|159123809|gb|EDP48928.1| cell cycle checkpoint protein Rad17, putative [Aspergillus
fumigatus A1163]
Length = 722
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 150/357 (42%), Gaps = 78/357 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS--TNVLVITGQAGVGKTATVR 196
WA+KY P SL ELAV +KKV +V++W L D+ F +LV+ G AG GKT T+
Sbjct: 95 WAQKYSPVSLNELAVHKKKVADVQSW----LSDALCAFEKVCKLLVLRGPAGSGKTTTLS 150
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY------GST 250
++ LG + EW P+ + + +TS +FE F+ R R+ G+T
Sbjct: 151 LLSDKLGFDVLEWRNPSGSEF--------AAKGFTSTTAQFEEFLTRGNRFRGLEFHGAT 202
Query: 251 SPSI----PGESKSSAILLIDDLPV-----TNGRTAFERLRQCLLLLV------------ 289
S + + ++LI++ P + G AF Q L +
Sbjct: 203 GSSASKFNSSDHMTPRVILIEEFPTVFDGDSPGLAAFRLSLQRYLSVSSSPRSNIRNDIE 262
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPITNG----SI 341
R P ++++E ++ S + +F + IL V N I ++
Sbjct: 263 RHGSSPVVIIVSET-MLNTEGSYSDNFTAHKLLGPDILSHPCTTIVDFNAIAPTFMFKAL 321
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKP-N 400
L K R+ + + L + + GDIR AI+SL+F L L +P
Sbjct: 322 NLVLEKHIRRYRSAKRPGPAMLKSLSEVGDIRSAISSLEF----------LCLRYERPEK 371
Query: 401 FPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNKRE-----TDN 440
+P A G +I R+ +L LFHA+GK ++NKRE TDN
Sbjct: 372 YPFHNATKTGQGNISLAPVEKEALQTITYRESSLGLFHAVGKIVYNKREDLSSTTDN 428
>gi|70982795|ref|XP_746925.1| cell cycle checkpoint protein Rad17 [Aspergillus fumigatus Af293]
gi|66844550|gb|EAL84887.1| cell cycle checkpoint protein Rad17, putative [Aspergillus
fumigatus Af293]
Length = 722
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 150/357 (42%), Gaps = 78/357 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS--TNVLVITGQAGVGKTATVR 196
WA+KY P SL ELAV +KKV +V++W L D+ F +LV+ G AG GKT T+
Sbjct: 95 WAQKYSPVSLNELAVHKKKVADVQSW----LSDALCAFEKVCKLLVLRGPAGSGKTTTLS 150
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY------GST 250
++ LG + EW P+ + + +TS +FE F+ R R+ G+T
Sbjct: 151 LLSDKLGFDVLEWRNPSGSEF--------AAKGFTSTTAQFEEFLTRGNRFRGLEFHGAT 202
Query: 251 SPSI----PGESKSSAILLIDDLPV-----TNGRTAFERLRQCLLLLV------------ 289
S + + ++LI++ P + G AF Q L +
Sbjct: 203 GSSASKFNSSDHMTPRVILIEEFPTVFDGDSPGLAAFRLSLQRYLSVSSSPRSNIRNDIE 262
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQ----SILVDAGARKVALNPITNG----SI 341
R P ++++E ++ S + +F + IL V N I ++
Sbjct: 263 RHGSSPVVIIVSET-MLNTEGSYSDNFTAHKLLGPDILSHPCTTIVDFNAIAPTFMFKAL 321
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKP-N 400
L K R+ + + L + + GDIR AI+SL+F L L +P
Sbjct: 322 NLVLEKHIRRYRSAKRPGPAMLKSLSEVGDIRSAISSLEF----------LCLRYERPEK 371
Query: 401 FPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNKRE-----TDN 440
+P A G +I R+ +L LFHA+GK ++NKRE TDN
Sbjct: 372 YPFHNATKTGQGNISLAPVEKEALQTITYRESSLGLFHAVGKIVYNKREDLSSTTDN 428
>gi|315046504|ref|XP_003172627.1| cell cycle checkpoint protein RAD17 [Arthroderma gypseum CBS
118893]
gi|311343013|gb|EFR02216.1| cell cycle checkpoint protein RAD17 [Arthroderma gypseum CBS
118893]
Length = 927
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 160/353 (45%), Gaps = 55/353 (15%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQ 186
S++ +T + WAE++ P +L+ELAV ++KV +V+ W E +G S+ + +LV+ G
Sbjct: 270 SSAPVQTTGKPWAEQFAPANLDELAVHKRKVADVQNWLNEVFIGRSRRR----ILVLKGP 325
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
AG GKT T+ ++ LG + EW T EY + Y S +F++F+ R +
Sbjct: 326 AGSGKTTTISLLSKALGYDIVEWRNSAGT---EY-----SAQGYASTGTQFDDFLGRGEQ 377
Query: 247 Y------GSTSPSIPGESKS-----SAILLIDDL-----PVTNGRTAFER--LRQCLLLL 288
Y G + S P S + I+L+++ P ++G TAF LR L
Sbjct: 378 YNCLDLDGEATASTPNSSAALQSSRRRIILVEEFPSSLSPGSSGLTAFRSALLRHAAPSL 437
Query: 289 -----------VRSTHIPTAVVLTEC--GKADSVDSTAQSFEELQSILVD-AGARKVALN 334
V + + P ++++E G S + L L + G + N
Sbjct: 438 PSSSARMTARSVETLNTPIVIIVSETLLGDGTSFSDSFTVHRLLGPELSNHPGVGIIEFN 497
Query: 335 PITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ----ASGGDIRQAITSLQFSSLKQDPML 390
PI + + L + ++E ++I A A GD+R AI+SL+F L+
Sbjct: 498 PIAPTFLTKALDLVLKKEARLSHRKRIPGPAVLKRFAEMGDVRSAISSLEFICLRGGDYE 557
Query: 391 NLSLSIS-KP-----NFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
S +++ +P P A + R+ +L +FHA+GK ++NKR+
Sbjct: 558 GYSGTLNGRPKRLGKTNPPPTAMEMETLEMVTQREASLGIFHAVGKIMYNKRD 610
>gi|224002336|ref|XP_002290840.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974262|gb|EED92592.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 935
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 174/440 (39%), Gaps = 117/440 (26%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW------------------------- 164
+A+ + ++W +K+ PR+ +EL + KK++EV++W
Sbjct: 342 AAAKGSSEMWIDKHAPRTTKELCIAPKKIDEVKSWLVSHINSRQSKRKPHSNSNNNNNNN 401
Query: 165 ------------FEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWD-- 210
++ LGD+ T ++++ G G+GK+A V+ +A + + W+
Sbjct: 402 NNNKAMSMHTTPYDNPLGDNPPP-DTKMMILIGSPGIGKSAMVKVLAREMNLEILMWNDD 460
Query: 211 ----TPTPTIWQEYMHNCKTGLEYTSKLDEFENF-------VERIRRYG----------- 248
+Q L Y S+L FE F ++ + G
Sbjct: 461 HVDYVDNSASFQIGCDGAGEYLPYQSQLASFEEFLNTGGLGMDSLEVAGLDSGGGGGGKS 520
Query: 249 ------STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
S + GE + S ++LI+++P + + R + +R T++PT V ++
Sbjct: 521 SKSGRTSLTSEKDGEYEGS-VILIEEIPNIYNAESAQAFRNIMERHIRRTNVPTVFVFSD 579
Query: 303 C--GKADSVDSTAQSFEEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-LS 357
GK D E L S+L + + + +T +K++L I ++E L
Sbjct: 580 VYEGKHKPED-----LERLIPSSMLYSLLVQTLQIQAVTKAKMKKSLEAIAKEEGLGRLP 634
Query: 358 TEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG 417
TE ++ + +SGGD+R AI +LQF F + G ++
Sbjct: 635 TELMEELHLSSGGDLRHAILALQF------------------RFGSGSSTGGRARAVDLD 676
Query: 418 ------RDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFS--------RLPLKMD 463
RD LS FHALGK L+ KR+ + QD + +K + R PL
Sbjct: 677 STKASKRDVKLSTFHALGKLLYAKRKPRS-----QDPYSTTEKRTGISAWDDGRGPLDF- 730
Query: 464 APEKVLSQAHGQARPVLDFL 483
PE+VL + + F+
Sbjct: 731 VPEQVLEKTDMATSSAISFI 750
>gi|118785611|ref|XP_314771.2| AGAP008673-PA [Anopheles gambiae str. PEST]
gi|116127817|gb|EAA10117.2| AGAP008673-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 139/326 (42%), Gaps = 51/326 (15%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
E +KP +LA+ KK+EEV+ W K +T +L++TG +G GK+ ++ +A
Sbjct: 2 EHFKPAQEADLAIHVKKIEEVKQWLT---AAKKLHPATQILLVTGPSGSGKSVCLKTLAK 58
Query: 201 HLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLD----------------EFENFVERI 244
LG ++EW TP L Y K D F++F+ +
Sbjct: 59 ALGYSIHEWTTPV-----------DVDLYYDDKFDFDQDRVEKQGRRPQKALFDDFLYKT 107
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
RY S S GE SS +LL+ D P + R+ E L S+ P + T+
Sbjct: 108 SRYCSLFASAAGE--SSKLLLVKDFPNSMLRSP-EEFHDSLDRFRDSSTDPIVFIATDTA 164
Query: 305 KADSVD--------STAQSFE--ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
+ S+D + +SF+ +++ V A K A+ I GS+ + I +Q Q
Sbjct: 165 -SKSLDVAYNLFPPAVLESFQIHQIKFNAVSATLLKKAIKRI--GSVMKADKDIAKQYQT 221
Query: 355 SLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD--PMLN-LSLSISKPNFPEEKADGH-- 409
S + + + +S GD+R + F+ +K D PM L L S KA
Sbjct: 222 VPSKQVEEDIIVSSQGDLRNCCLNYLFTCMKSDGGPMPKRLRLDGSSVGGKSGKASKATT 281
Query: 410 GGFSIQFGRDETLSLFHALGKFLHNK 435
G +E L++ HALG+ H K
Sbjct: 282 NRHKQPLGLNENLTIMHALGRIFHPK 307
>gi|332024688|gb|EGI64881.1| Cell cycle checkpoint protein RAD17 [Acromyrmex echinatior]
Length = 425
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 145/360 (40%), Gaps = 73/360 (20%)
Query: 144 KPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLG 203
+P L ELA+ ++K +E+ W + + K ++L+++G +G GKTA ++ +A
Sbjct: 63 EPERLSELAISKQKQKEISNWLQNKTLKGK----PSMLILSGPSGCGKTAAIKLLAKENS 118
Query: 204 ARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAI 263
+ EW TP + E H + G D FE+ + R RY ++ G+ +
Sbjct: 119 FDVIEWITPVDPVEDENKHIMRQG-------DRFEDHLIRATRYH----TVLGDCLKQ-L 166
Query: 264 LLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTAQSFEELQ 320
L+ D+P E + LL + + P V TE G +S
Sbjct: 167 FLVKDIP----NVYHEDYKNFFALLEKYFQMGREPVIFVFTETG-----NSKLMHILFPP 217
Query: 321 SILVDAGARKVALNPITNGSIKRTLSKICRQ------EQYSLSTEQIDLVAQASGGDIRQ 374
I + G + +N T S+K L ++ + +S ID + S GD+R
Sbjct: 218 DIRMKFGIDIININAATTTSMKNVLKRVSNTLNSISGDMLHVSQRHIDEILSNSIGDVRS 277
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
A+ +L F SL+ PE G R+ETL L H +G+ ++
Sbjct: 278 AVLNLIFVSLR---------------VPERHVKSECGI-----REETLGLLHGVGRVINP 317
Query: 435 KRETD-NLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMR 493
KR++ N K D PE+ + Q+ + FL EN +L+ +R
Sbjct: 318 KRQSHGNSFKFVHD-----------------PEETAAFFQSQSVVFVKFLQEN-YLNTIR 359
>gi|328767929|gb|EGF77977.1| hypothetical protein BATDEDRAFT_91219 [Batrachochytrium
dendrobatidis JAM81]
Length = 1014
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 153/408 (37%), Gaps = 113/408 (27%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN--VLVITGQAGVGKTAT 194
QLW +KYKP S E+A+ +KK+++VR W TN +LV++G +GVGKTA
Sbjct: 305 QLWVDKYKPNSEAEVAIHKKKLKDVRDWLIRAFSGHNGNGRTNGKLLVLSGPSGVGKTAA 364
Query: 195 VRQIASHLGARLYEWDTPT-----PTIWQEYMHNCKTG------LEYTSKLDEFENFV-- 241
+ +A L + EW+ P +IW + G +Y L F++F+
Sbjct: 365 LNVLACELDFEIVEWENPVNINTFQSIWDRHDSLGADGKVERFTSDYVPVLQRFQDFLTS 424
Query: 242 -----------------------ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAF 278
+ SP+I SK I+LI+D P ++
Sbjct: 425 SCKTPALHFTTTSVNSKSKSLTQSNLHTQSYNSPNIASTSKRK-IVLIEDWPQLGSMSSR 483
Query: 279 ERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEEL--------------QSILV 324
+ L + + S + +VL +D S F+ + I
Sbjct: 484 TSVHTALRMYLASKNSAYPLVLIISDTSDVHQSGNTMFKGMGFTDAPITLRTLISPDISS 543
Query: 325 DAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE-------QIDLVAQASGGDIRQAIT 377
A + N + + + L++I E S+S I+ ++++S GDIR AI
Sbjct: 544 QASYTHIKFNLVAPTILAKALTRIADIEFRSMSKRIHRPSKMMIEWISKSSSGDIRHAIH 603
Query: 378 SLQF------------------------------------------SSLKQDPMLNLSLS 395
LQF S+L D L+ LS
Sbjct: 604 RLQFLALIDPKSIPLSLQEEPQKYNKRGRNGRSLVSADDTSDRAVCSTLGGDGFLDAGLS 663
Query: 396 ISKPNFPEEKADGHGGFSIQFG-------RDETLSLFHALGKFLHNKR 436
S P ++++ G S RDE++S+F A+G+ +NKR
Sbjct: 664 KS----PHDRSNARGKSSTVRASLDQVDCRDESVSIFQAVGRIRYNKR 707
>gi|443899227|dbj|GAC76558.1| checkpoint RAD17-RFC complex, RAD17/RAD24 component [Pseudozyma
antarctica T-34]
Length = 796
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 160/370 (43%), Gaps = 74/370 (20%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN--VLVITGQAGVGKTATV 195
LW+E+ P++ EELAV +K+ +VR W EE + K + + +L +TG AG K+AT+
Sbjct: 104 LWSERLAPQNSEELAVHPRKIAQVRTWLEEAFSN-KPVLARHRKLLALTGPAGSAKSATI 162
Query: 196 RQIAS--HLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS---- 249
+ +AS L + EW TP+ + +S +D F +F+ + ++ S
Sbjct: 163 KALASPADLDYDILEWHNDTPS-----FDPTSAFVPGSSFVDRFTDFLSKAAKFPSLQLQ 217
Query: 250 ---------------------TSPSIPGESKSSAILLIDDLPVTN---GRTAF-----ER 280
T S +K + ++L+ DLP + R+ F +
Sbjct: 218 SSAHADIDESSAGAFASSSLDTLDSSAAAAKRNRLVLLQDLPNLHHAPTRSLFQAALEQH 277
Query: 281 LRQCLLLLVRST-HIPTAVVLTECGKADSVD-----STAQSFEELQSILVDAG---ARKV 331
L Q LL R ++P +++TE + D +++ ++ + + +VD +V
Sbjct: 278 LAQSTLLTSRGVPNVPIVIIVTESAPREDEDGWVAGASSSTWRDRIASIVDTRTVLGERV 337
Query: 332 ALNP-------------ITNGSIKRTLSKICRQ------EQYSLSTEQIDL---VAQASG 369
NP I +KR + + Q + L + +DL +A +
Sbjct: 338 RRNPAYAEVRYNTIAPSILLKGLKRAIDQAPAQLLRKNKPKAGLPKDILDLLGAIANDAN 397
Query: 370 GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALG 429
GD+R A+ LQF + + +++ + + + GR+ +L+LFHALG
Sbjct: 398 GDLRAALNCLQFMGASRHQLDHMAKEAASKPGRRGRTGVGRMLPLVAGRESSLALFHALG 457
Query: 430 KFLHNKRETD 439
+ L+NKR D
Sbjct: 458 RVLYNKRAGD 467
>gi|1586087|prf||2203263A rad17 gene
Length = 606
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 152/362 (41%), Gaps = 70/362 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
QLW EKY P+ +LAV + K+ ++ W L DS + +L+I G +G GK+ V+
Sbjct: 70 QLWFEKYIPQKAADLAVHKSKISAIKQWM---LTDS---LESRLLLICGPSGCGKSTAVQ 123
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-----------RIR 245
+A LG L EW P +E + L T K F + E I+
Sbjct: 124 VLAKELGYSLIEWLNPMNL--KEPSNQESDTLSLTEKFSRFMSLCETYPELELMDSNNIQ 181
Query: 246 RYGSTSPSIPGESKSSAILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHIPTAV-VLTEC 303
+ G + G+ K + +D++P ++ + + R + + S P+ + VLTE
Sbjct: 182 KRGKNA---QGKKK---FIFLDEIPHLSKFNGSLDAFRNVIRTALTSRGAPSIIMVLTEI 235
Query: 304 --GKADSVDSTAQ-SFEELQ----SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
+ ++S + SF +Q +L D + NPI +K+ L I R+E
Sbjct: 236 QLNNLEGINSQDRNSFNSVQIMGNDLLQDPRVTVLQFNPIAPTYMKKCLGSILRKEGVPK 295
Query: 357 STEQIDLV---AQASGGDIRQAITSLQFS---SLKQDPMLNL-----------SLSISKP 399
S + + LV AS GD+R AI LQ S S ++ N+ S+
Sbjct: 296 SPKLLSLVENICSASEGDLRSAINGLQLSISQSFEKKGTKNIREVKEGKGKGNDFSLEAA 355
Query: 400 NFPEE--KAD--------GHGGFSIQ---------FGRDETLSLFHALGKFLHNKRETDN 440
E K+D + G I F +D L + HA+GK + NKRE D+
Sbjct: 356 QVLERLSKSDSEAYARFKNYKGAYIPKSDKNENSFFKKDVGLGMMHAIGKVVWNKREGDD 415
Query: 441 LV 442
V
Sbjct: 416 EV 417
>gi|358374233|dbj|GAA90826.1| cell cycle checkpoint protein Rad17 [Aspergillus kawachii IFO 4308]
Length = 777
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 153/360 (42%), Gaps = 79/360 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSK----DKFST--NVL 181
WA+++ P S+EELAV KKV +V++W F+E L + D F T +L
Sbjct: 128 WAQQFAPSSIEELAVHHKKVSDVKSWLNNTFARGERQFKEELSSTMLRYIDSFLTEDKLL 187
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
V+ G AG GKTATV +++ L + EW P+ + H S F++F+
Sbjct: 188 VLRGPAGSGKTATVSLLSAVLNYDILEWKNPSSSESATKAH--------VSIASRFDDFL 239
Query: 242 ERIRRYGS------TSPSIPGESKSSA------ILLIDDLPVTNGRTAFERLRQCLLL-- 287
ER + TS PG++ ++A I+LI++ P G + L + LL
Sbjct: 240 ERGNEFKGLDLDEVTSSPGPGDNDNNADASRRRIILIEEFPTLTGSASGLTLFRLALLRY 299
Query: 288 LVRST------------HIPTAVVLTEC-GKADSVDSTAQSFEELQSILVDAGARKVAL- 333
L R++ + P ++++E + S S + + L ++ + L
Sbjct: 300 LDRTSQHNIDSETDVQRNSPIVLIVSETLLNSRSFPSDSLTVHRLLGPVLYNHPKTSILD 359
Query: 334 -NPITNGSIKRTLSKICRQEQYSLSTEQIDLVA----QASGGDIRQAITSLQFSSLKQDP 388
N I + + L + +E E+ A ++ GDIR AI+SL+F +
Sbjct: 360 FNSIAPTFMYKALHLVLEKEARLSKRERFPSPAILHNISTIGDIRSAISSLEFLCMN--- 416
Query: 389 MLNLSLSISKPNFPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNKR 436
S FP K G SI R+ +L LFHA+GK ++NKR
Sbjct: 417 ------SGGFKKFPPPKTRNSKGSSIPLTAFERETLDLVTQREASLGLFHAIGKVMYNKR 470
>gi|17534769|ref|NP_496793.1| Protein HPR-17 [Caenorhabditis elegans]
gi|3876586|emb|CAB04224.1| Protein HPR-17 [Caenorhabditis elegans]
gi|4019209|gb|AAC95522.1| Rad17-like protein [Caenorhabditis elegans]
Length = 514
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 58/355 (16%)
Query: 145 PRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGA 204
PR +EL + KK+ EV W + +S + V+ +TG AG GK+ TV + +
Sbjct: 15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLG--VMYLTGPAGSGKSTTVEVMCTEQNI 72
Query: 205 RLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAIL 264
+ E+ EY+HN E + F+ +RR+GS + G +L
Sbjct: 73 EIIEYSP-------EYLHNEDFECE-KPDFTQLRRFL--LRRHGS----LRGGGLKKRLL 118
Query: 265 LIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE---CGKADSVDSTAQSFEELQS 321
L+ +LP + E+ R+ L +++ P LT C + + F +
Sbjct: 119 LVTELP-DQAYSDAEKFREDLSEVLQHIWHPVIFCLTNSIACWNLNPDRLFTKDFNIMN- 176
Query: 322 ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
G V NP+ + +K+ L + LS +++++ + +GGD+R A+ LQ
Sbjct: 177 -----GIDTVTFNPVADSFMKKALVRASNCLSSPLSDAKLNVIGEEAGGDLRIAMNMLQM 231
Query: 382 SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSI----QFGRDETLSLFHALGKFLHNKRE 437
+S+ PN AD G S+ + R+E FH +G+ L+ KR
Sbjct: 232 NSI-------------GPN-----ADRRSGNSVICASKANREEA---FHMIGRILYAKRV 270
Query: 438 TDNLVKMD------QDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
N+ K + + + + R L+ D P +++ + + +LDFL +N
Sbjct: 271 NPNVPKPSRFSKRRRKSAPIPEPLVRTELEHD-PTDIITMSSMTSEKLLDFLFQN 324
>gi|303321680|ref|XP_003070834.1| hypothetical protein CPC735_039530 [Coccidioides posadasii C735
delta SOWgp]
gi|240110531|gb|EER28689.1| hypothetical protein CPC735_039530 [Coccidioides posadasii C735
delta SOWgp]
Length = 893
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 151/354 (42%), Gaps = 71/354 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEER-LGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
WAE++ P L+ELAV +KKV +V+ W + +G SK G AG GKT TV
Sbjct: 233 WAERFGPADLDELAVHKKKVADVQRWLVDVFMGRSKR---------VGPAGSGKTTTVSL 283
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPS---- 253
++ LG + EW + EY + Y S +F++F+ R ++ S S S
Sbjct: 284 LSKTLGYEIIEWKN---SSGSEY-----SSAGYVSTSAQFDDFLSRTDKFRSLSMSQDSL 335
Query: 254 -----IPGESKSSA----ILLIDDLP--VTNGRTAFERLRQCLLLLVRST---------- 292
I +S S+ I+LI++ P +++G ++ R L + +T
Sbjct: 336 SAKSIIKDKSTPSSNRRRIILIEEFPTSLSHGSSSLMAFRSSLERYLATTVPSMGFHSRP 395
Query: 293 -------HIPTAVVLTEC--GKADSVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIK 342
P ++++E G ++ F L I G + NP+ I
Sbjct: 396 PRPDNESDTPIVIIVSETLLGTGAALSDNFTVFRLLGPEISNHPGVSIIEFNPVAPTFIT 455
Query: 343 RTLSKICRQEQYSLSTEQIDLVAQASG----GDIRQAITSLQFSSLKQDPMLNLSLSISK 398
+ L + ++E ++ A G GDIR AI SL+F ++ D + S +++
Sbjct: 456 KALDLVLKKEARISKRRRVPGPAALKGFAEMGDIRSAIASLEFLCIRGDKDGDWSGTVAS 515
Query: 399 PNFPEEKADGHGGFSIQ----------FGRDETLSLFHALGKFLHNKRETDNLV 442
K G+ ++ R+ +L LFHA+GK ++NKRE ++
Sbjct: 516 ----RLKRGGNTVAALTNMEKESLVAITHRESSLGLFHAVGKVVYNKREDPSIT 565
>gi|409043715|gb|EKM53197.1| hypothetical protein PHACADRAFT_185902 [Phanerochaete carnosa
HHB-10118-sp]
Length = 732
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 137/343 (39%), Gaps = 61/343 (17%)
Query: 145 PRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGA 204
PR ELAV +KV +VR W E K + +L +TG AG KTAT+R ++ +G
Sbjct: 125 PRVQAELAVHVRKVRDVRHWITEAFESDKLRKYRRILALTGPAGTAKTATIRVLSREMGF 184
Query: 205 RLYEWDTPTPTIW-QEYMHNCKTGLEYTSKLDEFENFVERIRR-------------YGST 250
+ EW ++ Q + EY ++F F+ R + S
Sbjct: 185 DVLEWRNSMDEVYTQSDDFDPDYDTEYEGLSEKFHKFLTRAIQCPPLFSPQSVSAASTSH 244
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRST----HIPTAVVLTECG-- 304
SP+ ++L++DLP L LV S+ +IP V+L+ G
Sbjct: 245 SPTTKFAKSRKQVILLEDLPNVLHPGTQRSFHASLESLVSSSPSANNIPIIVILSSAGVR 304
Query: 305 KADSVDSTAQSFEELQSILV----------DAGARKVALNPITNGSIKRTLSKI-----C 349
+ D +S+ S+ + ++ NPI ++R L +
Sbjct: 305 GENPEDDGGRSWRAKDSVDIRMVIPSTLWGGPYVTHISFNPIAPTLMRRGLQSLLTTYFA 364
Query: 350 RQEQY------------SLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSIS 397
QE ++ E +DLV + S GDIR A+ +LQF+ +
Sbjct: 365 SQESKTSSKPKSKAPAGPVAKEILDLVIETSNGDIRSAVMTLQFA---------CTSPSL 415
Query: 398 KPNFPEEKADGHGGFSIQF-----GRDETLSLFHALGKFLHNK 435
+ +K GG + R+++L+LFH +GK L+NK
Sbjct: 416 ASSSLSKKGARKGGNTRALLEAVTRREQSLALFHLIGKILYNK 458
>gi|212541480|ref|XP_002150895.1| cell cycle checkpoint protein Rad17, putative [Talaromyces
marneffei ATCC 18224]
gi|210068194|gb|EEA22286.1| cell cycle checkpoint protein Rad17, putative [Talaromyces
marneffei ATCC 18224]
Length = 883
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 151/359 (42%), Gaps = 64/359 (17%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAG 188
S + ++ W+EKY P ++ LAV +KKV +VR W L G S+ K +LV+ G AG
Sbjct: 215 STEETDRRPWSEKYAPHVIDHLAVHKKKVADVREWLSAALSGRSRHK----ILVLHGPAG 270
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
GKT TV ++ L + +W +P + + G +YTS + ++F+ ++ +
Sbjct: 271 CGKTTTVSLLSDELKFDIIDWKSP-------FSTDSGNG-QYTSLSAQLDDFLSQLNGFS 322
Query: 249 S---------------------TSPSIPGESKSSAILLIDDLP--VTNGRTAFERLRQCL 285
S PG++ ++LI++ P ++ G T + L
Sbjct: 323 GLDLSYSSASSSSSSSSASKSSISKQTPGQTARKRVILIEEFPANLSWGSTTLSLFQTSL 382
Query: 286 LLLVRS--------------THIPTAVVLTEC--GKADSVDSTAQSFEEL-QSILVDAGA 328
+ S T P ++++E G + S + L + GA
Sbjct: 383 RRYLASSSPGSRSIFGSTTDTTPPIVIIISETMLGSSGSTSENLTAHRLLGPEVYTHPGA 442
Query: 329 RKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSL 384
+ NPI + + L I ++E +I L + GDIR AI++L+F +
Sbjct: 443 TTIEFNPIAPTFMLKALQVILKKETNKSGRREIPGTEVLKKLSELGDIRSAISALEFLCV 502
Query: 385 K-----QDPMLNLSL-SISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
+ Q S S +K P + + R+ +L LFHA+GK ++NKR+
Sbjct: 503 RDVRGSQGWSGRASWKSTTKSTVPLTAMEKE-SLELITQRETSLGLFHAVGKVVYNKRD 560
>gi|403176838|ref|XP_003335450.2| hypothetical protein PGTG_17303 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172421|gb|EFP91031.2| hypothetical protein PGTG_17303 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 778
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 159/401 (39%), Gaps = 74/401 (18%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAG 188
+ S + LW++K+ P +LAV KK+ + W + L G S + +L++ G AG
Sbjct: 98 NPSHANGMLWSDKFTPSDPSQLAVHPKKLALIHTWLNDALHGGSHTRKYRRLLILAGPAG 157
Query: 189 VGKTATVRQIA-SHLGARLYEWDTPTPTIWQEYMHNCKT-------GLEY---------- 230
GK+ + +A L +N KT G+ Y
Sbjct: 158 CGKSTIIHTLAEPALQTHAPGPSAAASANRSSKSNNSKTVSAPSVEGIGYEILEWKNTGN 217
Query: 231 ---TSKLDEFENFVERIRRYGSTS----------PSIPGES-----------KSSAILLI 266
SK EF ++ R + S S+P S K +LL+
Sbjct: 218 ESSVSKPQEFSLWLMRASAGPTLSFEDTEEESIDVSLPSTSDQVESDEKRRTKLPTLLLV 277
Query: 267 DDLP----VTNGRTAFERLRQCL-----------LLLVRSTHIPTAVVLTECGKADSVDS 311
DDLP GR +RQ L L++ +T P A L E S
Sbjct: 278 DDLPNLSHSETGRIFTNAIRQHLNSPRVSTPPLVLIVSDTTVTPGANGLEESFGGRSGGF 337
Query: 312 TAQSFEELQ-------SILVDAGARKVALNPITNGSIKRTLSKICRQ---EQYSLSTEQI 361
+ + IL + L P+ N +K+ L++I + ++ +
Sbjct: 338 SGAEDRGMNVHTLLPSDILHHPATCLLKLLPVNNTLMKKLLARIAQSAPTPSFNPGPKHF 397
Query: 362 DLVAQASGGDIRQAITSLQ-FSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF--GR 418
DLV +AS GD+R A+ +LQ F +L M N+ SK N P AD F+ Q R
Sbjct: 398 DLVVEASNGDLRAALNNLQLFFTLPTPKMENVG-GKSKRNLP--LADASSLFNRQLLSSR 454
Query: 419 DETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLP 459
DE+L +FH+LGK L+NKR D+ + +D V K LP
Sbjct: 455 DESLVIFHSLGKILYNKRWGDDAKEDAKDKRVRGPKPDPLP 495
>gi|392589176|gb|EIW78507.1| hypothetical protein CONPUDRAFT_167507 [Coniophora puteana
RWD-64-598 SS2]
Length = 880
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 160/431 (37%), Gaps = 128/431 (29%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFST--NVLVITGQAGVGKTA 193
QLW +KY+P +LAV ++KVE+VR W EE G K +L +TG AG KTA
Sbjct: 160 QLWVDKYQPTCEADLAVHKRKVEDVRRWLEEAFEGGPSGKLRKYRRILALTGPAGTAKTA 219
Query: 194 TVRQIASHLGARLYEW-DTPTPTIWQEYMHNCKTGLEYT---------SKLDEFENFVER 243
T+R +A +G + EW + W N ++ S +D+FE F+ R
Sbjct: 220 TLRVLAREMGFEIVEWRNGANERPWTANSMNIDGDVDADDLPALVDTESTMDKFEAFLLR 279
Query: 244 IRRY--------GSTSPSI----------PGESKSS--------AILLIDDLPVTNGRTA 277
S++P++ P S +S ++L++DLP
Sbjct: 280 ASACSNIFSAAPSSSTPAVSSASTSTSAAPLASVASTSSRPARRTLILLEDLPNVLHAPT 339
Query: 278 FERLRQCLLLLV------RSTHIPTAVVLTECGKADSVDSTAQ---------SFEELQSI 322
RLR L + P A+V+++ G TA+ ++ +
Sbjct: 340 QARLRTALAAFASPSSNNNTPGPPLALVISDSGAGTGAGDTAEWDTTGGRYAAWSRGRRE 399
Query: 323 LVDA------------GARKVALNPITNGSIKRTLSKICRQE------------------ 352
+VD G +VA NP+ + R L + +
Sbjct: 400 VVDVRSVLGPEVLGMPGVMQVAFNPVAKTIMGRALVGLVGRHFDGAGRGSGMGVGTGLSQ 459
Query: 353 ----------QYSL-------------------STEQIDLVAQASGGDIRQAITSLQFSS 383
Q SL S E +DL+ +++ GDIR AI +LQF+
Sbjct: 460 ELSRSSISNSQRSLGGKGKGKSRQKQKQKGKKPSREVLDLIVESANGDIRSAIMALQFAC 519
Query: 384 LKQDPMLNLSLSISK-----PN----------FPEEKADGHGGFSIQFGRDETLSLFHAL 428
L + P + S + PN R+++L LFH +
Sbjct: 520 LVELPGSSSSAATGGSSRKGPNKGGTGNAAAKAAGGGTSARAVLEAVTRREQSLVLFHLM 579
Query: 429 GKFLHNKRETD 439
GK L+NKR+ D
Sbjct: 580 GKVLYNKRKGD 590
>gi|19115830|ref|NP_594918.1| RFC related checkpoint protein Rad17 [Schizosaccharomyces pombe
972h-]
gi|1709996|sp|P50531.1|RAD17_SCHPO RecName: Full=Checkpoint protein rad17
gi|1054850|emb|CAA62993.1| rad17 [Schizosaccharomyces pombe]
gi|2330686|emb|CAB11206.1| RFC related checkpoint protein Rad17 [Schizosaccharomyces pombe]
Length = 606
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 148/362 (40%), Gaps = 70/362 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
QLW EKY P+ +LAV + K+ ++ W L DS + +L+I G +G GK+ V+
Sbjct: 70 QLWFEKYIPQKAADLAVHKSKISAIKQWM---LTDS---LESRLLLICGPSGCGKSTAVQ 123
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-----------RIR 245
+A LG L EW P +E + L T K F + E I+
Sbjct: 124 VLAKELGYSLIEWLNPMNL--KEPSNQESDTLSLTEKFSRFMSLCETYPELELMDSNNIQ 181
Query: 246 RYGSTSPSIPGESKSSAILLIDDLP-VTNGRTAFERLRQCL-LLLVRSTHIPTAVVLTEC 303
+ G + G+ K + +D++P ++ + + R + L +VLTE
Sbjct: 182 KRGKNA---QGKKK---FIFLDEIPHLSKFNGSLDAFRNVIRTALTSRGAFSIIMVLTEI 235
Query: 304 --GKADSVDSTAQ-SFEELQ----SILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
+ ++S + SF +Q +L D + NPI +K+ L I R+E
Sbjct: 236 QLNNLEGINSQDRNSFNSVQIMGNDLLQDPRVTVLQFNPIAPTYMKKCLGSILRKEGVPK 295
Query: 357 STEQIDLV---AQASGGDIRQAITSLQFS---SLKQDPMLNL-----------SLSISKP 399
S + + LV AS GD+R AI SLQ S S ++ N+ S+
Sbjct: 296 SPKLLSLVENICSASEGDLRSAINSLQLSISQSFEKKGTKNIREVKEGKGKGNDFSLEAA 355
Query: 400 NFPEE--KADGHGGFSIQ-----------------FGRDETLSLFHALGKFLHNKRETDN 440
E K+D + F +D L + HA+GK + NKRE D+
Sbjct: 356 QVLERLSKSDSEAYARFKNYKSAYIPKSDKNENSFFKKDVGLGMMHAIGKVVWNKREGDD 415
Query: 441 LV 442
V
Sbjct: 416 EV 417
>gi|145235841|ref|XP_001390569.1| cell cycle checkpoint protein rad17 [Aspergillus niger CBS 513.88]
gi|134058258|emb|CAK38450.1| unnamed protein product [Aspergillus niger]
Length = 756
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 138/343 (40%), Gaps = 66/343 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA+++ P S+EELAV +KKV +V++W + +LV+ G AG GKTAT+ +
Sbjct: 128 WAQQFAPSSIEELAVHQKKVSDVKSWLISTFA----RRERQLLVLRGPAGSGKTATISLL 183
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG-------STS 251
++ L + EW P+ + H S F+ F+ER + ++S
Sbjct: 184 SAVLNFDILEWKNPSSSESATKAH--------VSIASRFDEFLERGNEFKCLDLEEVASS 235
Query: 252 PSIPGESKSSA-----ILLIDDLPVTNGR-TAFERLRQCLLLLV---------------R 290
P + SK++ I+LI++ P G + R LL + R
Sbjct: 236 PGLEDNSKNAYASRHRIILIEEFPTLTGSASGLIPFRLALLRYLDRIPQQNINPETDVQR 295
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVA-LNPITNGSIKRTLSKIC 349
++ I V T + + L +L + + N I + + L +
Sbjct: 296 TSPIVLVVSETLLNSRSFPSDSLTAHRLLGPVLYNHPKTSILDFNSIAPTYMYKALHLVL 355
Query: 350 RQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEK 405
+E E+ L ++ GDIR AI+SL+F + S FP K
Sbjct: 356 EKEARLSKRERFPGPAILHNISTIGDIRSAISSLEFVCMN---------SGGFKKFPPPK 406
Query: 406 ADGHGGFSIQFG------------RDETLSLFHALGKFLHNKR 436
G SI R+ +L LFHA+GK ++NKR
Sbjct: 407 TKNSKGSSIPLTPLERETLDLITQREASLGLFHAVGKIMYNKR 449
>gi|350633057|gb|EHA21424.1| hypothetical protein ASPNIDRAFT_50787 [Aspergillus niger ATCC 1015]
Length = 662
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 140/351 (39%), Gaps = 70/351 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN--------VLVITGQAGVG 190
WA+++ P S+EELAV +KKV +V++W + + S +LV+ G AG G
Sbjct: 22 WAQQFAPSSIEELAVHQKKVSDVKSWLISTFARRERQVSYRPFPPPPHFLLVLRGPAGSG 81
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG-- 248
KTAT+ +++ L + EW P+ + H S F+ F+ER +
Sbjct: 82 KTATISLLSAVLNFDILEWKNPSSSESATKAH--------VSIASRFDEFLERGNEFKCL 133
Query: 249 -----STSPSIPGESKSSA-----ILLIDDLPVTNGR-TAFERLRQCLLLLV-------- 289
++SP + SK++ I+LI++ P G + R LL +
Sbjct: 134 DLEEVASSPGLEDNSKNAYASRHRIILIEEFPTLTGSASGLIPFRLALLRYLDRIPQQNI 193
Query: 290 -------RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVA-LNPITNGSI 341
R++ I V T + + L +L + + N I +
Sbjct: 194 NPETDVQRTSPIVLVVSETLLNSRSFPSDSLTAHRLLGPVLYNHPKTSILDFNSIAPTYM 253
Query: 342 KRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSIS 397
+ L + +E E+ L ++ GDIR AI+SL+F + S
Sbjct: 254 YKALHLVLEKEARLSKRERFPGPAILHNISTIGDIRSAISSLEFVCMN---------SGG 304
Query: 398 KPNFPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNKR 436
FP K G SI R+ +L LFHA+GK ++NKR
Sbjct: 305 FKKFPPPKTKNSKGSSIPLTPLERETLDLITQREASLGLFHAVGKIMYNKR 355
>gi|259486694|tpe|CBF84756.1| TPA: cell cycle checkpoint protein Rad17, putative (AFU_orthologue;
AFUA_8G02820) [Aspergillus nidulans FGSC A4]
Length = 766
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 147/356 (41%), Gaps = 92/356 (25%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA++Y P +L+ELAV ++KV +V W + L + K N+L++ G AG GKT T+ +
Sbjct: 131 WAQRYAPLNLDELAVHKRKVGDVERWLSDAL---EGKTRKNLLILRGPAGSGKTTTISLL 187
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS------TSP 252
+ L + EW TP+ + + +Y S +F+ F+ R +GS S
Sbjct: 188 SKKLRFDVLEWKTPSTVTY--------SSKDYVSFGAQFDGFLSRSHIFGSLTLDGHHSS 239
Query: 253 SIPGESKSSA---ILLIDDLPVTNGR--TAFERLRQCLLLLV------------RSTHIP 295
+P + ++ ++LI++ P R T R +L + R +P
Sbjct: 240 QVPLNNDHASQRRVILIEEFPTMAARNTTVLASFRLSILRYLSLNGPHGGNTYGREVRVP 299
Query: 296 TAVVLTECGKA--------------------DSVDSTAQSFEELQSILVDAGARKVALNP 335
V++ + + D+T F + + ALN
Sbjct: 300 PIVMVVSETFSSTESSFNNLTTHQLLGRELYNHPDTTIIEFNSIAPTFMHK-----ALNL 354
Query: 336 ITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ-------DP 388
+ +K++ + C + +L+ I+ +++ GDIR AI SL+F L DP
Sbjct: 355 V----LKKSSCQPCGNQ--TLTQSIIENISKI--GDIRNAIASLEFICLGNGNKGYWSDP 406
Query: 389 MLN--------LSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ + + EE A R+ +L LFHA+GK ++NKR
Sbjct: 407 TVKTRRTARTRMKNTAVGSEMREEIAQ----------REASLGLFHAVGKIIYNKR 452
>gi|67903778|ref|XP_682145.1| hypothetical protein AN8876.2 [Aspergillus nidulans FGSC A4]
gi|40744934|gb|EAA64090.1| hypothetical protein AN8876.2 [Aspergillus nidulans FGSC A4]
Length = 756
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 147/356 (41%), Gaps = 92/356 (25%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA++Y P +L+ELAV ++KV +V W + L + K N+L++ G AG GKT T+ +
Sbjct: 121 WAQRYAPLNLDELAVHKRKVGDVERWLSDAL---EGKTRKNLLILRGPAGSGKTTTISLL 177
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST------SP 252
+ L + EW TP+ + + +Y S +F+ F+ R +GS S
Sbjct: 178 SKKLRFDVLEWKTPSTVTY--------SSKDYVSFGAQFDGFLSRSHIFGSLTLDGHHSS 229
Query: 253 SIPGESKSSA---ILLIDDLPVTNGR--TAFERLRQCLLLLV------------RSTHIP 295
+P + ++ ++LI++ P R T R +L + R +P
Sbjct: 230 QVPLNNDHASQRRVILIEEFPTMAARNTTVLASFRLSILRYLSLNGPHGGNTYGREVRVP 289
Query: 296 TAVVLTECGKA--------------------DSVDSTAQSFEELQSILVDAGARKVALNP 335
V++ + + D+T F + + ALN
Sbjct: 290 PIVMVVSETFSSTESSFNNLTTHQLLGRELYNHPDTTIIEFNSIAPTFMHK-----ALNL 344
Query: 336 ITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ-------DP 388
+ +K++ + C + +L+ I+ +++ GDIR AI SL+F L DP
Sbjct: 345 V----LKKSSCQPCGNQ--TLTQSIIENISKI--GDIRNAIASLEFICLGNGNKGYWSDP 396
Query: 389 MLN--------LSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ + + EE A R+ +L LFHA+GK ++NKR
Sbjct: 397 TVKTRRTARTRMKNTAVGSEMREEIAQ----------REASLGLFHAVGKIIYNKR 442
>gi|67616494|ref|XP_667489.1| CG7825-PA [Cryptosporidium hominis TU502]
gi|54658625|gb|EAL37254.1| CG7825-PA [Cryptosporidium hominis]
Length = 701
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 73/344 (21%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDSKDKFSTNVLVITGQAGVGKTATV 195
LWA K++P++ +EL V + K+ EV+++ E +S + N+L+I G G GKT +
Sbjct: 3 LWANKFEPKTAQELLVNKHKIIEVKSFLENSFISANSINGSKKNILIIFGPNGAGKTTIL 62
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
R + ++ ++ EWD PT I E + + S N E++
Sbjct: 63 RCLCNN-NIKILEWDPPT--ILNEGLGASFYRFIFNSVFFSKSNLNEKV----------- 108
Query: 256 GESKSSAILLIDDLPVT----NGRTAFERLRQCL--LLLVRSTHIPTAVVLTECGKADSV 309
++LI DLP T N + E +R L ++L S+ IP + E
Sbjct: 109 -------LVLIKDLPFTLLQHNTQVLIE-IRHFLSKIILNDSSIIPIVFIAGE------- 153
Query: 310 DSTAQSFEELQSILV--------DAGARKVA-------LNPITNGSIKRTLSKICRQEQY 354
D ++ F L+SIL ++ +K+A +NP + +K L I ++
Sbjct: 154 DRNSRQF--LKSILPGELDIYTENSTDKKLAKQIKIVRVNPFPSTVVKSRLKHILNVKKI 211
Query: 355 SLSTEQ---IDLVAQASGGDIRQAITSLQFS-SLKQDPMLNLSLSISKPN----FPEEKA 406
+ + I+ + Q S GD+ AI+ LQF QD + +L N +K
Sbjct: 212 FVGMGEGNLIEGIVQTSNGDLFHAISQLQFYFEGNQDIFVKNNLRDLTANAEFFLSGKKR 271
Query: 407 DGHGGFSIQ-----------FGRDETLSLFHALGKFLHNKRETD 439
H + + FG++ ++F +GK L+NKRE +
Sbjct: 272 SNHLNYRDKPYQTPNSTLSNFGKEPVYNIFRTIGKILYNKREEN 315
>gi|298675294|ref|YP_003727044.1| AAA ATPase [Methanohalobium evestigatum Z-7303]
gi|298288282|gb|ADI74248.1| AAA ATPase central domain protein [Methanohalobium evestigatum
Z-7303]
Length = 499
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P +L ++ +K +E ++ W EE L + +K +++ G+AG+GKT+T +
Sbjct: 7 WAEKYRPSTLSDVVGNKKALESLKKWAEEWLDNVPEK---RAVILHGRAGIGKTSTAYAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G W+ +E + + +I S + S+ G
Sbjct: 64 ANDFG-----WEV----------------IELNASDQRTAEVINKIAGSASKTGSLFGSG 102
Query: 259 KSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC-GKADSVDSTAQS 315
I+L D+L TN R + + ++ T P ++ + G A S+ + Q
Sbjct: 103 GKRLIVLDEADNLHGTNDRGGARAISET----IKKTDQPVVLIANDVYGVASSIRN--QC 156
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
E + N + SI +L KIC++E + E I+ +AQ S GD+R A
Sbjct: 157 LE-------------IKFNNVQTRSIAASLKKICKKEDINCDDESIEKLAQDSDGDVRSA 203
Query: 376 ITSLQ 380
I LQ
Sbjct: 204 INDLQ 208
>gi|45201208|ref|NP_986778.1| AGR112Cp [Ashbya gossypii ATCC 10895]
gi|44986062|gb|AAS54602.1| AGR112Cp [Ashbya gossypii ATCC 10895]
Length = 623
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 66/323 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KY+PR L+E+A+ R K+E VR E L + T +L++TG AG K+ V+ +
Sbjct: 48 WYDKYRPRRLDEVAIHRNKLEGVRKALEAMLSGTS---QTRILLLTGPAGCSKSTVVKLL 104
Query: 199 ASHLGARLYEWDTPTPTIWQEYMH---NCKTGLEYTSK-----LDEFENFVERIR-RYGS 249
++ L + ++ + +E MH T +EY++ L++F+ F+++ + R G
Sbjct: 105 SAEL---VLQYRSAA----REDMHLPARANTYVEYSNDTDAPPLEQFDEFLQQAKYRIG- 156
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTAVVLTECGKAD 307
P++ A+ L+++LP R LL L + P + LTEC +
Sbjct: 157 --PNL-------AVALVEELPNVFHEETRHRFNMSLLQWLSMERELPPLVICLTECEINE 207
Query: 308 S-----VDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
S +D+ + L + +L ++ N I + + L I +E L +
Sbjct: 208 SNRRFGIDTMFVAETLLTKEVLTHHLLSRIKFNAINATLLTKRLRYIAARETQFLPHSKR 267
Query: 362 DLVAQ------ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ 415
LV GDIR AI +LQF G +
Sbjct: 268 ALVGSYIKELAGRSGDIRSAIAALQFW-----------------------CHSAGSSGLA 304
Query: 416 FGRDETLSLFHALGKFLHNKRET 438
GR+ +L+ FHA+GK ++ ++T
Sbjct: 305 LGRESSLNYFHAIGKVIYGSKDT 327
>gi|156838549|ref|XP_001642978.1| hypothetical protein Kpol_1046p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113562|gb|EDO15120.1| hypothetical protein Kpol_1046p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 662
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 148/334 (44%), Gaps = 70/334 (20%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
SSS W EKY P ++ E+A+ KK+E VR L + + +++L++TG +G K
Sbjct: 54 SSSDSLCWYEKYSPTNISEVAIHNKKLESVRNELTSMLDGTSN---SHILLLTGPSGSSK 110
Query: 192 TATVRQIASHLGARLYEWDT-----PTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR- 245
++ ++ +A H +Y T P + + + +G +S + F++F+ + +
Sbjct: 111 SSVIKHLA-HSLIPMYRSSTVGLTGSNPDLIEYQVDFVPSG---SSSISHFKHFLNQAKY 166
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTAVV-LTE 302
R G ++ +I++++DLP +R+ LL L +++P V+ TE
Sbjct: 167 RIG----------QNLSIVMVEDLPNMFHNNTRSEIRKALLQWLYDSESNLPPLVICFTE 216
Query: 303 CGKADSVDSTAQSFEEL------------QSILVDAGARKVALNPITNGSIKRTLSKICR 350
C S D+ Q+++ + IL +++ NPI +++ LS+IC
Sbjct: 217 CD-IPSDDNITQNYQYSVDTTFTAETVFGKDILQHPKLKRIKFNPINATLLRKYLSQICI 275
Query: 351 QEQYSLSTE-----QIDLVAQAS--GGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
+ ++ L + + + S GD+R AI +L+F
Sbjct: 276 KNKHLLMQNNKWSIKDTFIRELSLNSGDLRSAIATLEFW--------------------- 314
Query: 404 EKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
A H ++ F R E+LS FH +GK ++ E
Sbjct: 315 --ATSHSYVTL-FTRRESLSFFHIIGKIIYGSTE 345
>gi|66362942|ref|XP_628437.1| RAD24/Rf-C activator 1 AAA+ ATpase [Cryptosporidium parvum Iowa II]
gi|46229466|gb|EAK90284.1| RAD24/Rf-C activator 1 AAA+ ATpase [Cryptosporidium parvum Iowa II]
Length = 701
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 73/344 (21%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDSKDKFSTNVLVITGQAGVGKTATV 195
LWA K++P++ +EL V + K+ EV+++ E +S + N+L+I G G GKT +
Sbjct: 3 LWANKFEPKTAQELLVNKHKIIEVKSFLENSFISANSINGSKKNILIIFGPNGAGKTTIL 62
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
R + ++ ++ EWD PT I E + + S N E++
Sbjct: 63 RCLCNN-NIKILEWDPPT--IINEGLGASFYRFIFNSVFFSKSNLNEKV----------- 108
Query: 256 GESKSSAILLIDDLPVT----NGRTAFERLRQCL--LLLVRSTHIPTAVVLTECGKADSV 309
++LI DLP T N + E +R L ++L S+ IP + E
Sbjct: 109 -------LVLIKDLPFTLLQHNTQVLIE-IRHFLSKIILNDSSIIPIVFIAGE------- 153
Query: 310 DSTAQSFEELQSILV--------DAGARKVA-------LNPITNGSIKRTLSKICRQEQY 354
D ++ F L+SIL ++ +K+A +NP + +K L I ++
Sbjct: 154 DRNSRQF--LKSILPGELDIYTENSTDKKLAKQIKIVRVNPFPSTVVKSRLKHILNIKKI 211
Query: 355 SLSTEQ---IDLVAQASGGDIRQAITSLQFS-SLKQDPMLNLSLSISKPN----FPEEKA 406
+ + I+ + Q S GD+ AI+ LQF QD + +L N +K
Sbjct: 212 FVGVGEGNLIEEIVQTSNGDLFHAISQLQFYFEGNQDIFVKNNLRDLTANTEFFLSGKKR 271
Query: 407 DGHGGFSIQ-----------FGRDETLSLFHALGKFLHNKRETD 439
H + + FG++ ++F +GK L+NKRE +
Sbjct: 272 SNHLNYRDKPYQTPNSTLSNFGKEPVYNIFRTIGKILYNKREEN 315
>gi|374110027|gb|AEY98932.1| FAGR112Cp [Ashbya gossypii FDAG1]
Length = 623
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 143/323 (44%), Gaps = 66/323 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KY+PR L+E+A+ R K+E VR E L + T +L++TG AG K+ V+ +
Sbjct: 48 WYDKYRPRRLDEVAIHRNKLEGVRKALEAMLSGTS---QTRILLLTGPAGCSKSTVVKLL 104
Query: 199 ASHLGARLYEWDTPTPTIWQEYMH---NCKTGLEYTSK-----LDEFENFVERIR-RYGS 249
++ L + ++ + +E MH T +EY++ L++F+ F+++ + R G
Sbjct: 105 SAEL---VLQYRSAA----REDMHLPARANTYVEYSNDTDAPPLEQFDEFLQQAKYRIG- 156
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTAVVLTECGKAD 307
P++ A+ L+++LP R LL L + P + LTEC +
Sbjct: 157 --PNL-------AVALVEELPNVFHEETRHRFNMSLLQWLSMERELPPLVICLTECEINE 207
Query: 308 S-----VDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
S +D+ + L + +L ++ N I + + L I +E L +
Sbjct: 208 SNRRFGIDTMFVAETLLTKEVLTHHLLSRIKFNAINATLLTKRLRYIAARETQFLPHSKR 267
Query: 362 DLVAQ------ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ 415
LV GDIR AI +LQF + G G ++
Sbjct: 268 ALVGSYIKELAGRSGDIRSAIAALQFWC---------------------HSAGSSGLAL- 305
Query: 416 FGRDETLSLFHALGKFLHNKRET 438
GR+ +L+ FHA+GK ++ ++T
Sbjct: 306 -GRESSLNYFHAIGKVIYGSKDT 327
>gi|58264176|ref|XP_569244.1| RAD17 isoform 4 [Cryptococcus neoformans var. neoformans JEC21]
gi|57223894|gb|AAW41937.1| RAD17 isoform 4, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 789
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 150/370 (40%), Gaps = 77/370 (20%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGD-----------SKDKFST--NVL 181
T Q+WA+ Y P +LA + ++++V+ W E L ++DK +L
Sbjct: 174 TAQMWADLYAPTVEADLAPGKARIQKVKGWLHESLYGYPADVQPPPLPTRDKLRKYRRIL 233
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
++TG AG GKT TVR +A +G + EW +E+ + TG+E S + +F +F+
Sbjct: 234 LMTGPAGGGKTTTVRLLAEQMGVDIIEWGESV----EEW--SLGTGIERESSISKFSSFL 287
Query: 242 ER-------IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS-TH 293
R + + +S S ++L+ LP + + LL ++ TH
Sbjct: 288 SRNSYPSLNLSQSPLSSSSRSVSQSRPRLILLTALPNLTHLPTRDAFHEALLTFCQTFTH 347
Query: 294 --IPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALN-------------PITN 338
P ++ ++ G + + D G R+ A++ P+
Sbjct: 348 SSCPMIIIHSDAGSGGRAEESWMDR--------DKGGREGAVDLVGKDVKNGPCFIPVAP 399
Query: 339 GSIKRTLSKICRQEQYSLSTEQI----DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSL 394
I + L+++ + + L+AQ+S GD+R AI SLQ + +
Sbjct: 400 TFILKALNRVISLTPLPPAQRPVKATLQLIAQSSNGDLRSAINSLQLLCGGRKHGDKDKV 459
Query: 395 SISKPNFPEEKADGHG---GFSIQFGR--------------------DETLSLFHALGKF 431
+ EE A G G GR +++L+LFHALGK
Sbjct: 460 GKKRKEREEEVASAKGRGKGRGSMGGRGAKLDVSFELRAVLDAVTRKEQSLNLFHALGKV 519
Query: 432 LHNKRETDNL 441
+NKR+ D L
Sbjct: 520 FYNKRKHDPL 529
>gi|367008336|ref|XP_003678668.1| hypothetical protein TDEL_0A01250 [Torulaspora delbrueckii]
gi|359746325|emb|CCE89457.1| hypothetical protein TDEL_0A01250 [Torulaspora delbrueckii]
Length = 646
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 149/335 (44%), Gaps = 76/335 (22%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W + Y PR++ E+ + +KKV EV ++ L D T +L++TG +G K+ VRQ+
Sbjct: 67 WYQLYGPRTVIEVCLHKKKVTEVSEALQKLLQGESD---TRILLLTGPSGCCKSTIVRQL 123
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKT----------GLEYTSKLDEFENFVERIRRYG 248
A+ L + T + ++ ++ +C G+ Y + EF+ F+ + +
Sbjct: 124 ANELIPKYR--TTGSNSLSVKHHGDCNVIEFENDANANGISY---MTEFQEFLTQAKY-- 176
Query: 249 STSPSIPGESKSSAILLIDDLPVT---NGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ P++ +++L++DLP R AF+ L + P + LTEC +
Sbjct: 177 RSGPNL-------SLILVEDLPNIFHPGTRKAFQDQLLQWLYMSSDALPPLVICLTEC-E 228
Query: 306 ADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
D D+ +F E + + IL + +++ NPI +K+TL +C + + +
Sbjct: 229 IDHEDNKPNAFGVDYSLTAESILGKEILSHSRLKRIKFNPINTTLMKKTLMNLCIKNKAT 288
Query: 356 LSTEQ--------IDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
L + I+ VA+ S GDIR I LQF + + S+ P P
Sbjct: 289 LMSTNKWSEKERVINEVAR-STGDIRSGIMILQFWA---------TSSMDTP-LP----- 332
Query: 408 GHGGFSIQFGRDETLSLFHALGKFLHNKR--ETDN 440
R+ +S FHA+GK LH + E DN
Sbjct: 333 ---------VRESFVSYFHAMGKVLHGSKDFEDDN 358
>gi|307211202|gb|EFN87402.1| Cell cycle checkpoint protein RAD17 [Harpegnathos saltator]
Length = 365
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 147/370 (39%), Gaps = 72/370 (19%)
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
+LV++G +G GKTA ++ +A + EW TP + E + G D FE+
Sbjct: 1 MLVLSGPSGCGKTAAIKLLAQEHKFDIIEWITPLDPVEDENKRVMRQG-------DRFED 53
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVV 299
+ R RY + + S +LLI DLP E + LL + I +
Sbjct: 54 HLIRATRYHTVLGTC-----SKQLLLIKDLP----NVYQEDHKSFFSLLEKYFQIGREPI 104
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI------CRQEQ 353
+ C +A + F +I G + +N +T ++K + ++ +
Sbjct: 105 IFVCTEASNSRLVQTLFA--PTIREKFGIDFINVNAVTQTAMKNVMKRVSGILNSIASDM 162
Query: 354 YSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFS 413
+S + ID S GD+R A+ +L F SL+ PE + G
Sbjct: 163 LHISQQHIDETLSNSIGDVRSAMLNLIFISLR---------------VPERWSKNECGV- 206
Query: 414 IQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH 473
R+ETL L H +G+ ++ KR+ DN K D PE++
Sbjct: 207 ----REETLGLLHGVGRVINPKRDPDNPCKFAHD-----------------PEEITGFFQ 245
Query: 474 GQARPVLDFLHENCWLDIMR----QTMFYNLLRLQLLLVEYYLE------ILIQCLLGGM 523
QA + FL EN +L+ +R TM ++L L +L + + L+ C+ G M
Sbjct: 246 SQAVIFVQFLQEN-YLNTIRTIEEATMASDILSLGDVLNSEWRDRNLGKVALLYCIRGLM 304
Query: 524 LFVSQSSGEW 533
L + W
Sbjct: 305 LANEKPVSGW 314
>gi|317159335|ref|XP_001827724.2| cell cycle checkpoint protein rad17 [Aspergillus oryzae RIB40]
Length = 725
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 144/359 (40%), Gaps = 67/359 (18%)
Query: 125 DHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
++DS+ S +L WA++Y P +L+EL V ++KV +V++W + + +LV+
Sbjct: 78 NNDSSPIHSQAHKLPWAQQYSPTNLDELVVHKRKVSDVQSWLRNAFAGTGEH---KLLVL 134
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G AG GKT T+ ++ LG + EW P E+ Y S +FE F+ R
Sbjct: 135 RGPAGSGKTTTINILSQTLGFDILEWKNPP---VSEFATKA-----YVSVAAQFEEFLGR 186
Query: 244 IRRYGSTS-------PSIPGESKSSAILLIDDLPV-----TNGRTAFERLRQCLLLL--- 288
++ P I+LI++ P ++ AF Q L +
Sbjct: 187 GDQFRKLDLDELTEFPQDSNRYHRQRIILIEEFPTLLHRGSSSLAAFRLSLQRYLAMENT 246
Query: 289 ------------VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILV--DAGARKVALN 334
+++ P ++++E S + + L ++ G V N
Sbjct: 247 LPSHGLNRSGVKAQASSSPVVIIVSETHLTSGSSSESLTVHRLLGPVLFNHPGTTIVDFN 306
Query: 335 PITNG----SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPML 390
I ++K L K R + + L + + GDIR A+ SL+F
Sbjct: 307 SIAPTFMYKAMKLILEKEARHSRRNKDPGPAILQSISRSGDIRSAVASLEF--------- 357
Query: 391 NLSLSISKPNFPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNKRE 437
L L + + P +A ++ R+ +L +FHA+GK ++NKR+
Sbjct: 358 -LCLDVGRWGIPATRAKKSSRNNVILTSAEKETLKLVTQREASLGIFHAVGKVVYNKRD 415
>gi|238507547|ref|XP_002384975.1| cell cycle checkpoint protein Rad17, putative [Aspergillus flavus
NRRL3357]
gi|220689688|gb|EED46039.1| cell cycle checkpoint protein Rad17, putative [Aspergillus flavus
NRRL3357]
Length = 725
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 144/359 (40%), Gaps = 67/359 (18%)
Query: 125 DHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
++DS+ S +L WA++Y P +L+EL V ++KV +V++W + + +LV+
Sbjct: 78 NNDSSPIHSQAHKLPWAQQYSPTNLDELVVHKRKVSDVQSWLRNAFAGTGEH---KLLVL 134
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G AG GKT T+ ++ LG + EW P E+ Y S +FE F+ R
Sbjct: 135 RGPAGSGKTTTINILSQTLGFDILEWKNPP---VSEFATKA-----YVSVAAQFEEFLGR 186
Query: 244 IRRYGSTS-------PSIPGESKSSAILLIDDLPV-----TNGRTAFERLRQCLLLL--- 288
++ P I+LI++ P ++ AF Q L +
Sbjct: 187 GDQFRKLDLDELTEFPQDSNRYHRQRIILIEEFPTLLHRGSSSLAAFRLSLQRYLAMENT 246
Query: 289 ------------VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILV--DAGARKVALN 334
+++ P ++++E S + + L ++ G V N
Sbjct: 247 LPSHGLNRSGVKAQASSSPVVIIVSETHLTSGSSSESLTVHRLLGPVLFNHPGTTIVDFN 306
Query: 335 PITNG----SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPML 390
I ++K L K R + + L + + GDIR A+ SL+F
Sbjct: 307 SIAPTFMYKAMKLILEKEARHSRRNKDPGPAILQSISRSGDIRSAVASLEF--------- 357
Query: 391 NLSLSISKPNFPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNKRE 437
L L + + P +A ++ R+ +L +FHA+GK ++NKR+
Sbjct: 358 -LCLDVGRWGIPATRAKKSSRNNVILTSAEKETLKLVTQREASLGIFHAVGKVVYNKRD 415
>gi|406605452|emb|CCH43096.1| Checkpoint protein [Wickerhamomyces ciferrii]
Length = 675
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 147/334 (44%), Gaps = 66/334 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY P+++ ++A+ KK++EV+ E+ + S D +LV++G AG K+ I
Sbjct: 101 WVHKYTPKTVNQVALHNKKLKEVKEDIEQMVKGSSD---LRLLVLSGPAGASKST----I 153
Query: 199 ASHLGARLYEWDTPTPTIWQEYM-HNCKTGLEYT------SKLDEFENFVERIR-RYGST 250
AS LG L P + N LEYT S + +F F+ + R G
Sbjct: 154 ASCLGKEL------VPEVRHSSKDQNNDYVLEYTNDNASGSSITQFSEFLMSAKYRMG-- 205
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRST--HIPTAVVLTEC----- 303
K+ +++L++DLP E ++ L + + P + +TEC
Sbjct: 206 --------KNLSLILVEDLPNVFHEATREDFQKSLFHWIHNDLRTPPLIICITECEFSND 257
Query: 304 GKAD---SVDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICRQEQ---YSL 356
G A ++D+ + L + +L++ +++ NP+ KR L I E S+
Sbjct: 258 GNASQGYNIDNNYTAETILGRKLLMNPRVKRIKFNPVNTLLTKRVLKDIKSHEPSIFKSI 317
Query: 357 STEQID--LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSI 414
+ID + + GDIR +I++ QF + K N P G G +
Sbjct: 318 GKSEIDEKIKELSEFGDIRSSISAFQF------------WAEWKFNHP-----GLGKDML 360
Query: 415 QFGRDETLSLFHALGKFLHNKRE--TDNLVKMDQ 446
G++ ++SLFHA+GK L + D+L MD+
Sbjct: 361 HIGKESSVSLFHAIGKCLFGSKNEGEDDLAAMDK 394
>gi|83776472|dbj|BAE66591.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 843
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 146/362 (40%), Gaps = 73/362 (20%)
Query: 125 DHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
++DS+ S +L WA++Y P +L+EL V ++KV +V++W + + +LV+
Sbjct: 196 NNDSSPIHSQAHKLPWAQQYSPTNLDELVVHKRKVSDVQSWLRNAFAGTGEH---KLLVL 252
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIW--QEYMHNCKTGLEYTSK-------- 233
G AG GKT T+ ++ LG + EW P + + + Y+ E+ +
Sbjct: 253 RGPAGSGKTTTINILSQTLGFDILEWKNPPVSEFATKAYVSVAAQFEEFLGRGDQFRKLD 312
Query: 234 LDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPV-----TNGRTAFERLRQCLLLL 288
LDE F + RY I+LI++ P ++ AF Q L +
Sbjct: 313 LDELTEFPQDSNRY-----------HRQRIILIEEFPTLLHRGSSSLAAFRLSLQRYLAM 361
Query: 289 ---------------VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILV--DAGARKV 331
+++ P ++++E S + + L ++ G V
Sbjct: 362 ENTLPSHGLNRSGVKAQASSSPVVIIVSETHLTSGSSSESLTVHRLLGPVLFNHPGTTIV 421
Query: 332 ALNPITNG----SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD 387
N I ++K L K R + + L + + GDIR A+ SL+F
Sbjct: 422 DFNSIAPTFMYKAMKLILEKEARHSRRNKDPGPAILQSISRSGDIRSAVASLEF------ 475
Query: 388 PMLNLSLSISKPNFPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNK 435
L L + + P +A ++ R+ +L +FHA+GK ++NK
Sbjct: 476 ----LCLDVGRWGIPATRAKKSSRNNVILTSAEKETLKLVTQREASLGIFHAVGKVVYNK 531
Query: 436 RE 437
R+
Sbjct: 532 RD 533
>gi|327349483|gb|EGE78340.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis ATCC
18188]
Length = 1002
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITG 185
H S ++ + WAE+Y P +L+EL V ++KV +V+ W + G K VLV+ G
Sbjct: 303 HSSTKLAAQGMRPWAEEYAPANLDELVVNKRKVSDVQRWLVDVFG---GKSKQRVLVLRG 359
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
AG GK+ T+ ++ LG + EW P + EY Y S +FE+F+ R
Sbjct: 360 PAGSGKSTTISLLSKALGFEIVEWKNP---LGSEYSSQG-----YVSMGAQFEDFLGRSD 411
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAF 278
++GS S S G LP+ NG +
Sbjct: 412 KFGSLSLSSDGHEP--------QLPIANGEADY 436
>gi|154288086|ref|XP_001544838.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408479|gb|EDN04020.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 961
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 160/388 (41%), Gaps = 96/388 (24%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQL-------WAEKYKPRSLEELAVQRKKVEEVRA 163
RFL P G + A S S QL WAE+Y P +L+EL V ++KV +V+
Sbjct: 269 RFLLPG---GTATAEPSRARDSPSPTQLFTRGIRPWAEEYAPTNLDELVVNKRKVSDVQK 325
Query: 164 WFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN 223
W G AG GK++T+ +++ +G + EW +P+ + +
Sbjct: 326 W--------------------GPAGSGKSSTISLLSNTIGFEIVEWRSPSGSEF------ 359
Query: 224 CKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSA------------------ILL 265
+ Y S +FE+F+ R ++GS S G+ S + ++L
Sbjct: 360 --SSQGYVSMGAQFEDFLGRGDKFGSLFLSDGGQEPSQSATHGNAEPLNTSTIEKRRVIL 417
Query: 266 IDDLPVT-----NGRTAFERLRQCLLL-----------LVRSTHI---PTAVVLTECGKA 306
+++ P + +G AF Q L+ +R T+I P ++++E
Sbjct: 418 VEEFPSSLNQSSSGLRAFRLALQSYLVTATPRQPFDNQFIRDTNISSPPLIMIVSETMLG 477
Query: 307 -DSVDSTAQSFEEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID- 362
+ S + + L I + N + + + + + ++E +++
Sbjct: 478 WGGISSDSFTVHRLLGPEISSHPSVSIIDFNRVAPTFMAKAIDLVLKKEARRSKRKRVPG 537
Query: 363 ---LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ---- 415
L A A GDIR AI++L+F L+ + N S +++ K GG +
Sbjct: 538 PEVLKAFAQMGDIRSAISALEFMCLRGEENTNWSGTVAG----RMKRSSKGGIPLTSMEK 593
Query: 416 ------FGRDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+GK ++NKRE
Sbjct: 594 ESLETVTKREASLGIFHAVGKVVYNKRE 621
>gi|391866509|gb|EIT75781.1| checkpoint RAD17-RFC complex, RAD17/RAD24 component [Aspergillus
oryzae 3.042]
Length = 844
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 144/359 (40%), Gaps = 67/359 (18%)
Query: 125 DHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
++DS+ S +L WA++Y P +L+EL V ++KV +V++W + + +LV+
Sbjct: 197 NNDSSPIHSQAHKLPWAQQYSPTNLDELVVHKRKVSDVQSWLRNAFAGTGEH---KLLVL 253
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G AG GKT T+ ++ LG + EW P E+ Y S +FE F+ R
Sbjct: 254 RGPAGSGKTTTINILSQTLGFDILEWKNPP---VSEFATKA-----YVSVAAQFEEFLGR 305
Query: 244 IRRYGSTS-------PSIPGESKSSAILLIDDLPV-----TNGRTAFERLRQCLLLL--- 288
++ P I+LI++ P ++ AF Q L +
Sbjct: 306 GDQFRKLDLDELTEFPQDSNRYHRQRIILIEEFPTLLHRGSSSLAAFRLSLQRYLAMENT 365
Query: 289 ------------VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILV--DAGARKVALN 334
+++ P ++++E S + + L ++ G V N
Sbjct: 366 LPSHGLNRSGVKAQASSSPVVIIVSETHLTSGSSSESLTVHRLLGPVLFNHPGTTIVDFN 425
Query: 335 PITNG----SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPML 390
I ++K L K R + + L + + GDIR A+ SL+F
Sbjct: 426 SIAPTFMYKAMKLILEKEARHSRRNKDPGPAILQSISRSGDIRSAVASLEF--------- 476
Query: 391 NLSLSISKPNFPEEKADGHGGFSIQFG------------RDETLSLFHALGKFLHNKRE 437
L L + + P +A ++ R+ +L +FHA+GK ++NKR+
Sbjct: 477 -LCLDVGRWGIPATRAKKSSRNNVILTSAEKETLKLVTQREASLGIFHAVGKVVYNKRD 534
>gi|320163974|gb|EFW40873.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 549
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 65/308 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFE-------ERLGDSKDKFSTNVLVITGQAGVGK 191
W E++ P + EL V +K++EEV AW + R G + K + VL++TG G GK
Sbjct: 105 WVERFAPVAAAELCVHKKRIEEVEAWIQIAIQQAGRRAGATNGK-AHKVLLLTGPPGAGK 163
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT----------------SKLD 235
TA +R +AS L + EW P W+ M + T + S +
Sbjct: 164 TALIRSLASSLRFEICEWVNPVRESWKHSMASASTAAMLSASGTSEERASNQEANLSTVV 223
Query: 236 EFENFVERIRRYGSTS-------------------PSIPGESKSSA------ILLIDDLP 270
F+ F+ R RY + + P++ G++ S+ ++L++D+P
Sbjct: 224 AFQEFLGRSDRYNTVAVEANQTSTTSSNAGLLGVLPTV-GQADGSSPSNLGKVILVEDMP 282
Query: 271 --VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGA 328
V + +F + + R P ++++ +S + L+++
Sbjct: 283 HLVPSQYASFHDVVRNAAAHAR---YPVIFIISDTRNGESEVRNLFPLDVLETLPGYNAP 339
Query: 329 R--KVALNPITNGSIKRTLSKICR--------QEQYSLSTEQIDLVAQASGGDIRQAITS 378
R +++ N ++ ++ + ++++ + E L +I +A S GD+R AI +
Sbjct: 340 RVHRISFNAVSQTALVKAITRVHQLALRSSSILEVPQLDKSEIATLALTSSGDVRAAINA 399
Query: 379 LQFSSLKQ 386
LQF L+Q
Sbjct: 400 LQFYCLEQ 407
>gi|452819364|gb|EME26424.1| cell cycle checkpoint protein isoform 1 [Galdieria sulphuraria]
Length = 493
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 36/294 (12%)
Query: 149 EELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYE 208
+ LAVQ+ K +V F E D K+ + +LVI G G GKT V + LG +
Sbjct: 71 KNLAVQKTKTRKVIE-FIESWDDGKN--NKKLLVILGPCGCGKTTLVETVIQELGCNVIR 127
Query: 209 WDTPT--PTIWQEYMH-NCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSA--I 263
W +++E + ++ E T + + E+ VE + P + SSA +
Sbjct: 128 WKQSLFGGNLYKETKSWDTRSVFENTFQRSQVEDLVEDLALSLQYQPLTLEQESSSARYV 187
Query: 264 LLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSIL 323
+++DD ++ E++ L L+ T PT +++T A SV A++FE +
Sbjct: 188 VVVDDNVMSKRVRNVEQVLTHLELIAEQTVYPTIIIITCDSMASSV--VAKTFE--RHTH 243
Query: 324 VDAGARKVALNPITNGSIKRTLSKICRQEQYSL-STEQIDLVAQASGGDIRQAITSLQFS 382
+ + ++L+P+T +++ S CR +L E + L+ + GD+R AI+ LQ
Sbjct: 244 SSSNIQCLSLHPVTKTEMQKATSLYCRLHNIALPEKEALTLIVEQCRGDLRWAISQLQL- 302
Query: 383 SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ E D RD + + HA+GK HNKR
Sbjct: 303 ------------------YWESSCDR----MFDDTRDTSFDICHAIGKIFHNKR 334
>gi|366999408|ref|XP_003684440.1| hypothetical protein TPHA_0B03350 [Tetrapisispora phaffii CBS 4417]
gi|357522736|emb|CCE62006.1| hypothetical protein TPHA_0B03350 [Tetrapisispora phaffii CBS 4417]
Length = 690
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 153/351 (43%), Gaps = 85/351 (24%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY P++LE++ + ++K+E+V+ E L + ST VL+ITG +G K+ + ++
Sbjct: 74 WYSKYSPKTLEDVVIHKRKLEDVKNELENMLSG---RSSTRVLLITGPSGSSKSTIIEKL 130
Query: 199 ASHLGARLYEWDTPTPTIWQEY----MHNCKTGLEY--------TSKLDEFENFVERIRR 246
A L R Y ++ T + + +++ + +Y +S ++ F+ F+ R +
Sbjct: 131 AEKLIPR-YRFNQGVYTSLRSFSSPDINSNQFITKYENDTIELNSSTVNSFDQFL-RNAK 188
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVT---NGRTAFERLRQCLLLLVRSTHIPTAVVLTEC 303
Y + + +++L+++LP + R AF + + L + P V LTEC
Sbjct: 189 YKT--------GNNLSLILVEELPNIFHMDTRMAFRKSLEEWLYSNDARLPPLVVCLTEC 240
Query: 304 GKADSVDSTAQSF--------EEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQ 353
+ S SF E + + +L + +++ NPI +K+ L+
Sbjct: 241 EIKSTEKSNINSFSVDTIFNAETVLGRELLNNPRLKRLKFNPINATLMKKHLTM------ 294
Query: 354 YSLSTEQIDLVAQAS---------------GGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
L+TE DL+ Q + GD+R +I + +F + NLS+
Sbjct: 295 --LATENKDLLKQNNKWEVKELFIKELSLISGDLRSSIAAFEFWA---SSSTNLSM---- 345
Query: 399 PNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAF 449
F R+E +S FHA+GK +H +E + ++ D F
Sbjct: 346 -----------------FTRNEAISFFHAIGKIIHGSKEISDDNELINDLF 379
>gi|452819363|gb|EME26423.1| cell cycle checkpoint protein isoform 2 [Galdieria sulphuraria]
Length = 431
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 36/292 (12%)
Query: 151 LAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWD 210
LAVQ+ K +V F E D K+ + +LVI G G GKT V + LG + W
Sbjct: 73 LAVQKTKTRKVIE-FIESWDDGKN--NKKLLVILGPCGCGKTTLVETVIQELGCNVIRWK 129
Query: 211 TPT--PTIWQEYMH-NCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSA--ILL 265
+++E + ++ E T + + E+ VE + P + SSA +++
Sbjct: 130 QSLFGGNLYKETKSWDTRSVFENTFQRSQVEDLVEDLALSLQYQPLTLEQESSSARYVVV 189
Query: 266 IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
+DD ++ E++ L L+ T PT +++T A SV A++FE +
Sbjct: 190 VDDNVMSKRVRNVEQVLTHLELIAEQTVYPTIIIITCDSMASSV--VAKTFE--RHTHSS 245
Query: 326 AGARKVALNPITNGSIKRTLSKICRQEQYSL-STEQIDLVAQASGGDIRQAITSLQFSSL 384
+ + ++L+P+T +++ S CR +L E + L+ + GD+R AI+ LQ
Sbjct: 246 SNIQCLSLHPVTKTEMQKATSLYCRLHNIALPEKEALTLIVEQCRGDLRWAISQLQL--- 302
Query: 385 KQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
+ E D RD + + HA+GK HNKR
Sbjct: 303 ----------------YWESSCDRM----FDDTRDTSFDICHAIGKIFHNKR 334
>gi|134107940|ref|XP_777352.1| hypothetical protein CNBB1540 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260042|gb|EAL22705.1| hypothetical protein CNBB1540 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 813
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 148/366 (40%), Gaps = 77/366 (21%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGD-----------SKDKFST--NVL 181
T Q+WA+ Y P +LA + ++++V+ W E L ++DK +L
Sbjct: 174 TAQMWADLYAPTVEADLAPGKARIQKVKGWLHESLYGYPADVQPPPLPTRDKLRKYRRIL 233
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
++TG AG GKT TVR +A +G + EW +E+ + TG+E S + +F +F+
Sbjct: 234 LMTGPAGGGKTTTVRLLAEQMGVDIIEWGESV----EEW--SLGTGIERESSISKFSSFL 287
Query: 242 ER-------IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS-TH 293
R + + +S S ++L+ LP + + LL ++ TH
Sbjct: 288 SRNSYPSLNLSQSPLSSSSRSVSQSRPRLILLTALPNLTHLPTRDAFHEALLTFCQTFTH 347
Query: 294 --IPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALN-------------PITN 338
P ++ ++ G + + D G R+ A++ P+
Sbjct: 348 SSCPMIIIHSDAGSGGRAEESWMDR--------DKGGREGAVDLVGKDVKNGPCFIPVAP 399
Query: 339 GSIKRTLSKICRQEQYSLSTEQI----DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSL 394
I + L+++ + + L+AQ+S GD+R AI SLQ + +
Sbjct: 400 TFILKALNRVISLTPLPPAQRPVKATLQLIAQSSNGDLRSAINSLQLLCGGRKHGDKDKV 459
Query: 395 SISKPNFPEEKADGHG---GFSIQFGR--------------------DETLSLFHALGKF 431
+ EE A G G GR +++L+LFHALGK
Sbjct: 460 GKKRKEREEEVASAKGRGKGRGSMGGRGAKLDVSFELRAVLDAVTRKEQSLNLFHALGKV 519
Query: 432 LHNKRE 437
+NKR+
Sbjct: 520 FYNKRK 525
>gi|366990353|ref|XP_003674944.1| hypothetical protein NCAS_0B04880 [Naumovozyma castellii CBS 4309]
gi|342300808|emb|CCC68572.1| hypothetical protein NCAS_0B04880 [Naumovozyma castellii CBS 4309]
Length = 651
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 68/323 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E+Y+PR+L+E+ + ++K+++V E L + D + +L++TG +G K+ V ++
Sbjct: 68 WYEQYQPRTLDEVVIHKRKLKDVTEALENMLNGNSD---SRILLLTGPSGCSKSTVVTKL 124
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY--TSKLD---EFENFVERIR----RYGS 249
A L + T+ N +EY S L+ + E+F E +R R GS
Sbjct: 125 ADFLIPKYRNSYGMRTTLRNREKTNV---VEYGNDSILNGQPQTESFAEFLRQAKYRIGS 181
Query: 250 TSPSIPGESKSSAILLIDDLPV---TNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG-K 305
+ +++L++DLP + R +F+ + L T P + LTEC +
Sbjct: 182 ----------NLSLILVEDLPNVFHSGTRYSFQNILLEWLYSSDETLPPLVICLTECELE 231
Query: 306 ADS-------VDSTAQSFEEL-QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
DS +DST + L + IL +++ NPI +K+ L K+C + Q L
Sbjct: 232 NDSNTFNTFNIDSTFTAETILGKQILSHPRLKRIKFNPINMTLMKKHLMKLCSKNQSLLE 291
Query: 358 -----TEQIDLVAQ--ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG 410
+ + + V ++ GDIR I++L+F + S+ + P E
Sbjct: 292 QNKKWSHRTEFVTHLCSNCGDIRSGISALEF------------WAKSRHSIPLET----- 334
Query: 411 GFSIQFGRDETLSLFHALGKFLH 433
R++++S FHA+GK ++
Sbjct: 335 -------REQSISYFHAIGKIIY 350
>gi|321248684|ref|XP_003191205.1| RAD17 isoform 4 [Cryptococcus gattii WM276]
gi|317457672|gb|ADV19418.1| RAD17 isoform 4, putative [Cryptococcus gattii WM276]
Length = 814
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 149/378 (39%), Gaps = 72/378 (19%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG-----------DSKDKFST--NVL 181
T Q+W + Y P +LA + ++++V+AW E L ++DK +L
Sbjct: 175 TAQMWTDLYAPTLEADLAPGKARIQKVKAWLHESLYGYPPDVQPPPLSTRDKLRKYRRIL 234
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
++TG AG GKT TVR +A +G + EW +E+ TG+E S + +F +F+
Sbjct: 235 LMTGPAGGGKTTTVRLLAEQMGVDIIEWGESV----EEW--GLGTGIERESSISKFSSFL 288
Query: 242 ERIRRYGSTSPSI------------PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
R ++ PS+ ++L+ LP + LL
Sbjct: 289 SR-----NSYPSLNLSQSPSSSSSRSVSQSRPRLILLTALPNLTHLPTRDAFHVALLTFC 343
Query: 290 RS-TH--IPTAVVLTECGKADS-----VDSTAQSFEELQSILVDAGARKVALNPITNGSI 341
++ TH P ++ ++ G +D E + +I+ P+ I
Sbjct: 344 QTFTHSSCPMIIIHSDAGSGGRAEEGWMDRDKGGREGVVNIIGQDVKNGPCFIPVAPTFI 403
Query: 342 KRTLSKICR----QEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSIS 397
+ L+++ + + L+AQ+S GD+R AI SLQ + +
Sbjct: 404 LKALNRVISLNPLPPAQRPTKATLQLIAQSSNGDLRSAINSLQLLCGGRKHGDKDRVGKK 463
Query: 398 KPNFPEEKAD------------GHGGFSIQFG------------RDETLSLFHALGKFLH 433
+ EE G G + G ++++L LFHALGK +
Sbjct: 464 RKEREEEVVSGSKGRGKGRGSMGGRGAKLDVGSELRAVLDAVTRKEQSLHLFHALGKVFY 523
Query: 434 NKRETDNLVKMDQDAFVV 451
NKR D + D+D V+
Sbjct: 524 NKRLGDPDERKDEDQEVL 541
>gi|198414545|ref|XP_002123165.1| PREDICTED: similar to RAD17 homolog, partial [Ciona intestinalis]
Length = 184
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 126 HDSAS---ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLV 182
H+S++ + S+ W EKY P+ LE+LAV +KK++EV W K K +L
Sbjct: 24 HNSSAKLFPTKSSPDTWIEKYAPQHLEQLAVHKKKIQEVENWLIMNRHRGK-KGGAPILF 82
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
++G AG GKT T+ +A G + EW+ P Y ++ ++Y S++ FE F+
Sbjct: 83 LSGPAGCGKTTTLVMVARKNGIEIAEWNNPLSV---PYSVTKQSDVQYKSEVVLFEEFLF 139
Query: 243 RIRRYGS--TSPSIPGESKSSAILLIDDLP 270
R +Y S ++P + ++L+++ P
Sbjct: 140 RSGKYPSLFSNPENNNDKIEGKLVLLEEFP 169
>gi|254578946|ref|XP_002495459.1| ZYRO0B11880p [Zygosaccharomyces rouxii]
gi|238938349|emb|CAR26526.1| ZYRO0B11880p [Zygosaccharomyces rouxii]
Length = 605
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 147/350 (42%), Gaps = 83/350 (23%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN--VLVITGQAGVGKTATVR 196
W KY P+ LEE+A+ +KK+++V E L S +L++TG +G K+ T
Sbjct: 46 WYVKYAPKKLEEVAIHKKKLQDVCQILESMLKSSTYGIDDGPRILLMTGPSGCSKSTTTY 105
Query: 197 QIASHL-------GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS 249
++A L G ++ D + +E+ + D F+ F+ +
Sbjct: 106 KLAEELVPKYRGSGFQMLRSDRKGSHV-----------VEFV-ETDNFQEFLVEAKYL-- 151
Query: 250 TSPSIPGESKSSAILLIDDLPV---TNGRTAFERLRQCLLLLVRSTHI---PTAVVLTEC 303
P++ +++LI+DLP T+ R AF++ LL + S + P + +TEC
Sbjct: 152 RGPNL-------SVVLIEDLPNIFHTDTRHAFQK---SLLEWLYSPEVGSPPLVICITEC 201
Query: 304 --------GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
G + TA+S + IL ++ NPI +K+ L C QE
Sbjct: 202 SLGNENSQGFGVDYNFTAESVLG-REILAHPKLARIKFNPINTTLMKKHLRSKC-QENRK 259
Query: 356 LSTEQ---------IDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKA 406
L + ID +A ++ GDIR AI +LQ+ + S P +
Sbjct: 260 LLIQNGKWNSKDLVIDQLA-STTGDIRSAIANLQY------------WATSSVEVPLDT- 305
Query: 407 DGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFS 456
R+E+L+ FH +GK LH RE D+ ++Q F K +
Sbjct: 306 -----------REESLTYFHTIGKILHGSRECDDNEMINQLTFNSKSHLA 344
>gi|322790279|gb|EFZ15278.1| hypothetical protein SINV_12475 [Solenopsis invicta]
Length = 463
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 55/305 (18%)
Query: 144 KPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLG 203
+P+ EL + R+K E+ W + R + ++L+++G +G GKTA ++ +A G
Sbjct: 59 EPQKPSELGISRQKQNEISNWLQGRAMKKQ-----SMLILSGPSGCGKTAAIKLLAKENG 113
Query: 204 ARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAI 263
+ EW TP E + G D FE+ + R RY + + + +
Sbjct: 114 FDVIEWITPMDPAEDENKRVVRQG-------DRFEDHLIRATRYRTVLGNCHKQ-----L 161
Query: 264 LLIDDLPVT---NGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQ 320
LL+ DLP N ++ +E + + L P V TE + + +
Sbjct: 162 LLVKDLPNVYQENCKSFYELVEKYFQL----GREPVIFVCTETNNSRLMQTLFPP----- 212
Query: 321 SILVDAGARKVALNPITNGSIKRTLSKICRQ------EQYSLSTEQIDLVAQASGGDIRQ 374
I+ G + +N T ++K L+++ +S+ I+ + S GD+R
Sbjct: 213 DIIKKFGIDHINVNAATLPAMKNVLNRVSSTLNSIAGNMLHVSSGHINEILSNSIGDLRS 272
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
A+ +L F SLK PE A G R+ETL L H +G+
Sbjct: 273 AVLNLIFISLK---------------VPERHAKNECGI-----REETLGLLHGVGRVTFP 312
Query: 435 KRETD 439
K+E++
Sbjct: 313 KKESN 317
>gi|295672409|ref|XP_002796751.1| cell cycle checkpoint protein RAD17 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283731|gb|EEH39297.1| cell cycle checkpoint protein RAD17 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 987
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 145/355 (40%), Gaps = 92/355 (25%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAE+Y P +L+EL V ++K VLV+ G AG GK+ T+ +
Sbjct: 322 WAEEYAPVNLDELVVNKRK---------------------RVLVLRGPAGSGKSTTISLL 360
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
+ +G + EW P + E + +Y S +FE+F+ R ++GS + S G++
Sbjct: 361 SKAIGFEILEWKNP---LGSELLSQ-----QYASMGAQFEDFLGRGDKFGSLTLSAGGQN 412
Query: 259 KSSA-----------------ILLIDDLP-----VTNGRTAFE-RLRQCLLLLVRSTHI- 294
K+ ++LI++ P ++G F +++ L + V S I
Sbjct: 413 KAQEPMTNGQTHSFNIKETRRVILIEEFPSSLSQTSSGLRTFRLAIQRYLAMAVPSQSIG 472
Query: 295 -----------PTAVVLTECGKADSVDSTAQSF-------EELQSILVDAGARKVALNPI 336
P +++ S +A SF EL + G + N I
Sbjct: 473 NRLGWNSPLTGPPLIMIVSETMLGSGGISADSFTVHRLLGPELSN---HPGTSIIDFNKI 529
Query: 337 TNGSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNL 392
+ + L + ++E ++I L A A GD+R AI+ L+F L+ D
Sbjct: 530 APTFMTKALDLVLKKEARRSKRKRIPGPVILKAFAEMGDVRSAISGLEFICLRGDENGGW 589
Query: 393 SLSISKPNFPEEKADGHG----------GFSIQFGRDETLSLFHALGKFLHNKRE 437
S +++ K G G I R+ +L +FHA+G+ ++NKRE
Sbjct: 590 SGTVAG----RMKKSGKGRVPLTSMEKESLEIVTQREASLGIFHAVGRVVYNKRE 640
>gi|389738439|gb|EIM79637.1| hypothetical protein STEHIDRAFT_126330 [Stereum hirsutum FP-91666
SS1]
Length = 870
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 107 ENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE 166
E+ G F PS GL + ++W + Y+P + E+LAV ++KV +VR W
Sbjct: 76 ESNGGFKVPSIPAGLSGKGIAKVQEPVADDRMWVDVYEPETEEDLAVHKRKVNDVRQWLL 135
Query: 167 ERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
E SK + +LV+TG AG GKT T+R ++ LG + EW P
Sbjct: 136 EAFQPSKLQKYRRLLVLTGPAGSGKTTTLRVLSRELGFEILEWRNP 181
>gi|389738430|gb|EIM79628.1| Rad17-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 817
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%)
Query: 112 FLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGD 171
F PS GL A + +W + Y+P + E+LAV ++KV +VR W E
Sbjct: 80 FKVPSIHAGLSGKGKAKAQEPVADDLMWVDVYEPETEEDLAVHKRKVNDVRQWLLEAFQP 139
Query: 172 SKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP 212
SK + +LV+TG AG GKT T+R ++ LG + EW P
Sbjct: 140 SKLQKYRRLLVLTGPAGSGKTTTLRVLSRELGFEILEWRNP 180
>gi|209879996|ref|XP_002141438.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557044|gb|EEA07089.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 686
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 136/333 (40%), Gaps = 51/333 (15%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSK---DKFST-NVLVITGQAGVGKTA 193
LW + Y+P+S+ L V R K+ +++++ + + D D ST +L+++G G GKT+
Sbjct: 4 LWTQLYEPKSIYNLDVNRLKISQLQSFLKNIISDRVKPLDYLSTCPILILSGPCGSGKTS 63
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPS 253
+R + + EW+TP GL + F F+ Y
Sbjct: 64 MLRVLCQSEQIDIIEWETPCGV---------SEGLGIS-----FYRFIVNSIFYKPAKME 109
Query: 254 IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS-----THIPTAVVLTECGKADS 308
P I+LI +LP T + + LL ++ + +P + E + +
Sbjct: 110 TP----KPRIVLIKELPYTLVKYNSPICSEIKYLLTKNHMSGCSLVPIIFITNESKQDRN 165
Query: 309 VDSTAQSFEELQSILVDAGARK----VALNPITNGSIKRTLSKICRQEQYSLS---TEQI 361
+ + + RK + LNP T +IK+ L I +QE + + T +
Sbjct: 166 FLRCILPENRILTTRGNNRCRKNIETIKLNPFTQSAIKKRLYNILKQEGINCTDRETSIV 225
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSI--------SKPNFPEEKADGHGGFS 413
+ + ++ GD+ AI LQF + D LN + ++ S N K +
Sbjct: 226 NSITISANGDMSHAINQLQF-CISYDTFLNPTTNLNINEVRCKSNRNINNLKYKKYANLY 284
Query: 414 --------IQFGRDETLSLFHALGKFLHNKRET 438
I R+ ++F +GK L+NKRE+
Sbjct: 285 SETNMWSIISDTREHVGNIFSVIGKILYNKRES 317
>gi|395324541|gb|EJF56979.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 605
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGD---SKDKFSTNVLVITGQAGVGKTA 193
+LW ++Y P + ++LAV ++KV++VR W E G+ K K +LV+TG AG KTA
Sbjct: 7 RLWVDRYGPTNEDDLAVHKRKVQDVRHWLSEAFGNDPSGKLKKYRRILVLTGPAGTAKTA 66
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCK--TGLEYTSKLDEFENFVER 243
TVR ++ LG + EW T+ + + + G+EY ++F F+ R
Sbjct: 67 TVRMLSDELGFDVLEWRN---TMDERFSRSEGDWDGVEYEGLAEKFRTFLTR 115
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 330 KVALNPITNGSIKRTLSKICRQEQYSLST-------EQIDLVAQASGGDIRQAITSLQFS 382
+++ NPI ++ L + + S S + ++L+ ++S GDIR AI +LQF+
Sbjct: 244 QISFNPIAPTYMRTALKSMLDRHFSSPSAVGTRPTKDVLELIVESSNGDIRSAINALQFA 303
Query: 383 SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLV 442
+K + + R+++L+LFH LGK ++NKR+ D
Sbjct: 304 CTADH---GTHKPGAKGSKKGKGPSATVMLEAVTRREQSLALFHLLGKIMYNKRKGDPSG 360
Query: 443 KMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQ--ARPVLDFLHENCWLDIMRQTMFYNL 500
K V ++K LK P + H + +R ++ L+ + +D +++ +
Sbjct: 361 KSSSAKDVRREKEIDAGLKDPPPLPPHYKHHERRASRVDIETLYADTPIDASLLSLYIHQ 420
Query: 501 LRLQLLLVEYYLEILIQC--LLGGMLFVSQSSGE 532
Q Y + L +C L+ + +V S GE
Sbjct: 421 NYTQ------YCDTLDECEALMDSLSWVDSSGGE 448
>gi|405118658|gb|AFR93432.1| RAD17 isoform 4 [Cryptococcus neoformans var. grubii H99]
Length = 810
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 161/418 (38%), Gaps = 95/418 (22%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-----------GDSKDKFST--NVL 181
T Q+W + Y P +LA + ++++V+ W E L ++DK +L
Sbjct: 148 TAQMWTDLYAPTLEADLAPGKARIQKVKGWLHESLYGYPPDVRPPPLPTRDKLRKYRRIL 207
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
++TG AG GKT TVR +A +G + EW +E+ + G+E S + +F +F+
Sbjct: 208 LMTGPAGAGKTTTVRLLAEQMGVDIIEWGESV----EEW--SLGNGIERESSISKFSSFL 261
Query: 242 ER-------IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS-TH 293
R + + + S ++L+ LP + + LL ++ TH
Sbjct: 262 SRNSYPSLNLSQSPLSLSSRLVSQSRPRLILLTALPNLTHLPTRDAFHEALLTFCQTFTH 321
Query: 294 --IPTAVVLTEC----------------GKADSVDSTAQSF------EELQSILVDAGAR 329
P ++ ++ G+ +VD + +EL+ + +R
Sbjct: 322 SSCPMIIIHSDAGSGGRAEESWMDRDKGGREGAVDVVGKDVKNGPWCQELEQVATSISSR 381
Query: 330 KVA------LNPITNGSIKRTLSKICR----QEQYSLSTEQIDLVAQASGGDIRQAITSL 379
A P+ I + L+++ + L+AQ+S GD+R AI SL
Sbjct: 382 ARANKEPNSFIPVAPTFILKALNRVISLTPLPPAQRPGKATLQLIAQSSNGDLRSAINSL 441
Query: 380 QF--SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG-------------------- 417
Q K M + + EE A G G G
Sbjct: 442 QLLCGGRKHGDMDKVGK--KRREREEEVASGAKGTGKGRGSMGGRGAKLDVSSELRAVLD 499
Query: 418 ----RDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQ 471
++++L+LFHALGK +NKR D D+D V+ +LP PE L Q
Sbjct: 500 AVTRKEQSLNLFHALGKVFYNKRLGDPNEGKDEDQEVL-SAIRQLP-----PEDPLPQ 551
>gi|260943299|ref|XP_002615948.1| hypothetical protein CLUG_04830 [Clavispora lusitaniae ATCC 42720]
gi|238851238|gb|EEQ40702.1| hypothetical protein CLUG_04830 [Clavispora lusitaniae ATCC 42720]
Length = 643
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 145/342 (42%), Gaps = 63/342 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EKY+P S ++ + +K +E+R + G+S+ +F L +TG +G K+ V+
Sbjct: 62 WTEKYRPTSSSQVCINPRKAKEIRDALGSMINGESRVRF----LALTGPSGSSKSTLVKC 117
Query: 198 IASHL-----GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR-RYGSTS 251
++ L G R D + T E + ++ L + D F +F++ R R GS
Sbjct: 118 LSKELVGGKIGKRQSAQDF-SETADSEVVEYSESELLNIPQPDHFSDFLDGCRYRVGS-- 174
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTH--IPTAVVLTECGKADSV 309
+ A++LI++LP E R+ L + S+ P + LTE + S
Sbjct: 175 --------NLAVILIEELPNVFHPKTLESFRRSLASWIYSSAELPPLVLCLTEV-EIQSE 225
Query: 310 DSTAQSF--------------EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
D + E L++ + +++ + P+ +K+TL I E+
Sbjct: 226 DRNKSFYNIENNLTLETLLGSELLRTTIASGLVQRIKVLPVAKTFLKKTLGHIVASEKLR 285
Query: 356 LSTEQIDLVAQA--SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFS 413
+ D V Q GDIR +I +LQF ++ P+F + A
Sbjct: 286 IPPSLTDQVFQPMYESGDIRSSICNLQFWAM-------------SPSFMKVSAS------ 326
Query: 414 IQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKF 455
R+ +SLFHA+GK +H+ + L + D +++ F
Sbjct: 327 ---VRENHISLFHAIGKVIHSSSKFAGLDEDTNDYLSIQEVF 365
>gi|403216752|emb|CCK71248.1| hypothetical protein KNAG_0G01910 [Kazachstania naganishii CBS
8797]
Length = 698
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 165/390 (42%), Gaps = 69/390 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EK+ P + ++A+ ++K+++V ++ L + T +L++TG +G K+ + +
Sbjct: 60 WYEKHAPLVMSDVAIHQRKLKDVETVLQDMLSSGCE--GTRLLLLTGPSGSSKSTIAKVL 117
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLD--------EFENFVERIRRYGST 250
A+ L E + E+ N + +EY + L +F+ F++ +
Sbjct: 118 ANRLVRN--ERELLCAATKSEFALNKRAIVEYENSLSLTDLGQMSQFKEFLKSCKY--CV 173
Query: 251 SPSIPGESKSSAILLIDDLPVT---NGRTAFERLRQCLLLLVRSTHIPTAVVLTECG-KA 306
PS + +++L++DLP R F+R + L + P + LTEC +
Sbjct: 174 GPS------NLSVILVEDLPNVFHAETRRLFQRAIEEWLYSPDTRLPPLVICLTECEIET 227
Query: 307 DSVDSTAQSFEELQS----------ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
DS Q+F S IL +++ NPI ++RTL IC +E+ +L
Sbjct: 228 DSNAMNQQNFSVDTSFTAQTVFTSHILNHPRLKQIKFNPINKTLMRRTLGNICMRERDTL 287
Query: 357 S--------TEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADG 408
+ I +A+ GD+R AI +L+F + ++L P++K
Sbjct: 288 QRNGKWAYRNKYIGKLAEEM-GDLRAAIATLEFWCGTKSNRIDL--------IPKKK--- 335
Query: 409 HGGFSIQFGRDETLSLFHALGKFLHNKRET-DNLVKMDQDAFVVKDKFSRLPLKMDAPEK 467
++S FHA+GK +H ++T D+ V + + + S K+ E
Sbjct: 336 ------------SVSYFHAIGKVIHGSQDTVDDEVMVTELIDTTRGTVSNDTFKLGLLEN 383
Query: 468 VLSQAHGQ--ARPVLDFLHENCWLDIMRQT 495
S G+ R LD + D MR T
Sbjct: 384 YSSHNSGELSLRSALDISNALSLSDCMRST 413
>gi|50293753|ref|XP_449288.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528601|emb|CAG62262.1| unnamed protein product [Candida glabrata]
Length = 661
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 71/341 (20%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
+T W PR+++E+A+ ++K+ +V+ F L + +L++TG +G K+
Sbjct: 51 NTDGAWYITCSPRNIDEVALHKRKLADVKEAFLSMLQSNSSMQRPRILLLTGPSGCSKST 110
Query: 194 TVRQIA---------SHLGARLYEWDTP-TPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
++ +A +L A Y + T + EY +N + L S +D F ++ R
Sbjct: 111 VIKLLAEQYIPNIRKEYLTAGPYNYSTTDNRKVINEYNNN--SNLIGQSHMDSFAEYL-R 167
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVL 300
+Y + ++ +++L++DLP + ++ LL + S P + L
Sbjct: 168 HAKYLT--------GRNLSLMLVEDLPNVTHKETRREFQKLLLQWLYSPEALLPPLIICL 219
Query: 301 TECGKADSVDSTAQSFEEL-------------QSILVDAGARKVALNPITNGSIKRTLSK 347
TEC D+ ++F + Q IL +++ NPI +K+ L+
Sbjct: 220 TECELKPENDN--KNFNYIGTDYLFTAETVLGQQILSHPLLKRIKFNPINATLMKKHLNI 277
Query: 348 ICRQEQYSLSTE--------QIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKP 399
+ +L I VA+ + GDIR I++LQF + S S +K
Sbjct: 278 VSHMNAGTLKNNGKWNDVSGYISDVAKNT-GDIRSGISNLQFWA--------CSSSNNK- 327
Query: 400 NFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDN 440
I F R+ +S FHA+GK ++ RE DN
Sbjct: 328 --------------ISFLRENNVSYFHAIGKIIYGSREFDN 354
>gi|242020296|ref|XP_002430591.1| cell cycle checkpoint protein rad17, putative [Pediculus humanus
corporis]
gi|212515763|gb|EEB17853.1| cell cycle checkpoint protein rad17, putative [Pediculus humanus
corporis]
Length = 502
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 144/354 (40%), Gaps = 56/354 (15%)
Query: 144 KPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS-TNVLVITGQAGVGKTATVRQIASHL 202
+P+SL++L V +KV EVR W R F + +L+I G G GKT T++ +A
Sbjct: 37 EPKSLQDLTVNSRKVSEVRRWVSRR------NFELSPILLICGPPGSGKTTTLKLVAEAE 90
Query: 203 GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE---FENFVERIRRYGSTSPSIPGESK 259
G + EW TP + + + + G + + E FE+F+ R RY PS+ + K
Sbjct: 91 GMSVVEWITPISKVITDNIIEDEYGDKSFYDMSESKKFEDFIARSSRY----PSL-FQPK 145
Query: 260 SSAILLIDDLPVTNGRTAFERLRQCLLLLVRS-THIPTAVVLTECGKADSVDSTAQSFEE 318
+++ D+P N L L ++ P A V+T+ D +S +
Sbjct: 146 RPTFIIVKDIP--NVFIWKPDLFHSFLEKYKTFNKTPIAFVITDDETLDLHNSLFPN--- 200
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI-- 376
I V + NPI++ K L+ E ++ + + S GD+R A+
Sbjct: 201 --DIKVKLNISLIKFNPISDTLFK-------------LNAENLETIVKNSCGDLRSALLD 245
Query: 377 TSLQFSSLK-QDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK 435
T +Q + + D +N ++K N + + + S RD + +G+ L+ K
Sbjct: 246 TVIQLRTNEISDNQINKKRKLNKLN-DDTLSVSNNCLS---ARDHGYDFYKKMGRILYPK 301
Query: 436 RETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWL 489
R +N + D +L A + FLHEN L
Sbjct: 302 RSEENSSQCSSQT-------------GDLVHNILEIAENWNKSYQSFLHENYLL 342
>gi|409096242|ref|ZP_11216266.1| replication factor C large subunit [Thermococcus zilligii AN1]
Length = 498
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q++ +E+VRAW E L + K LV+ G G GKT TV +
Sbjct: 7 WVEKYRPRRLSEIVNQKEAIEQVRAWVEAWLHGNPPK--KKALVLAGPPGCGKTTTVYAL 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + E E+I RY + ++
Sbjct: 65 ANEYGFEVIELNASD------------------------ERTYEKIERYVQAAYTMDILG 100
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
KS ++ +D+ A E + +L+ P + A + E
Sbjct: 101 KSRKLIFLDEADNIEPSGAKE-----IAVLIDKARNPIIM-------------AANHYWE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + A A+ V +T G I + L++I E+ ++ E + +A+ + GD+R AI
Sbjct: 143 V-PWEIRAKAQIVEYKRLTQGDIVKALARILHMEKITVPKEVLYDIAKHANGDLRAAIND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|399218437|emb|CCF75324.1| unnamed protein product [Babesia microti strain RI]
Length = 874
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 56/306 (18%)
Query: 106 KENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELA---VQRKKVEE-V 161
KE++ ++ + E N ++ + S LW +KY PRS+EE +Q KK+ E +
Sbjct: 338 KEDICTNVSGEKIENTANFGNNCLTMSQKNSSLWVDKYAPRSIEEFVSNQLQLKKLMEWL 397
Query: 162 RAWFEERLGDS----KDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIW 217
+ W G+S +D+ S +++G GVGKT + R I + G + E++
Sbjct: 398 KTWKNLHSGNSDNKKRDRSSFKCALLSGPPGVGKTTSARLIVASCGYSILEFNASDQRNK 457
Query: 218 Q--EYMHNCKTG-----LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLP 270
Q E + TG +YT+KL ++ +++D++
Sbjct: 458 QAIEQIAIMATGGITLNFDYTNKL------------------------CANTCIVMDEV- 492
Query: 271 VTNGRTAFER-LRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGAR 329
+G ++ +R Q + L+ ++ P ++ C D Q L + +D
Sbjct: 493 --DGISSGDRGGSQAIHRLIENSICP---IICICN-----DRNLQKIRSLANKCLD---- 538
Query: 330 KVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+ +P + + + L KIC+ E +++ ++ + + GDIRQ I +LQFSS + P
Sbjct: 539 -LKFSPPSKMLLVQRLKKICQCENITVNDNTLNSLCDSRQGDIRQCINALQFSSNSKTPF 597
Query: 390 LNLSLS 395
+ S S
Sbjct: 598 MAKSTS 603
>gi|325180218|emb|CCA14621.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 603
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 20/267 (7%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG-DSKDKFSTNVLVITGQAGVGK 191
+S LWA KY P ++ +L VQ++K ++ W EE K +++++G G GK
Sbjct: 109 NSQSTLWANKYAPATISKLCVQKRKYNQLYRWVEENAQIRGKCMQRKRLMILSGPPGCGK 168
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKT-GLE--YTSKLDEFENFVER----- 243
+ V+ IA LG + +W +P ++ H E +T+ ++EF F+ +
Sbjct: 169 STLVQCIARTLGVNVRKWK-ESPNFYKNGNHALPIYSFENSFTTPMEEFTRFITQATTLS 227
Query: 244 -IRRYGSTSPSIPGESKSSAILLIDDLP--------VTNGRTAFERLRQCLLLLVRSTHI 294
+ Y + ++S +++I+ P + ++ L+ L +V +
Sbjct: 228 ALPLYEKAKVGLKIAAQSGQLVVIEYWPQFMQSKAGSSVTISSTSTLQTLLRQVVNDKRL 287
Query: 295 PTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKV-ALNPITNGSIKRTLSKICRQEQ 353
V+L D + E +V + V +N +T ++R L I + E
Sbjct: 288 KYPVILIYSNVRDGKSDMGKLKREFTEAVVSSTWTSVLHINRVTTAQLRRQLQTIAKSEN 347
Query: 354 YSLSTEQIDLVAQASGGDIRQAITSLQ 380
+L T ++ + GD+R AI +LQ
Sbjct: 348 LTLDTVTLESIIAECNGDMRHAINTLQ 374
>gi|308509998|ref|XP_003117182.1| CRE-HPR-17 protein [Caenorhabditis remanei]
gi|308242096|gb|EFO86048.1| CRE-HPR-17 protein [Caenorhabditis remanei]
Length = 506
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 57/361 (15%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
L + P+ +EL + KK+ EV W + S+D + VL +TG G GK+ +V
Sbjct: 6 LLTNETAPKRRDELQIHNKKLGEVSNWLKSAF--SEDHSAPGVLYLTGPTGSGKSTSVEV 63
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ L ++ TP E +H+ LEY E +F + IR S+ G
Sbjct: 64 LCKEKNIELIDY---TP----ELLHD--DFLEY-----EKHDFSQLIRFLIRRHASLMGG 109
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE---CGKADSVDSTAQ 314
SK IL + +LP + + A ER R+ + + P LT C + +
Sbjct: 110 SKKQ-ILFVTELPDQSYQDA-ERFREEMYEALHRIRHPVIFCLTNDIACWNLNPDKLFTR 167
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
F + A + NP+ + +K+ L + LS +++++ + + GD+R
Sbjct: 168 EF------IRKADISTITFNPVADTFMKKALIRASNLLPSPLSDTKLNIIKEEARGDLRT 221
Query: 375 AITSLQFSSLKQDPMLNLSLSI---SKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKF 431
A+ LQ +S+ + + + SK N +E+A FH LG+
Sbjct: 222 AMNMLQMNSVGLNANRRTGMKVICASKAN--KEEA------------------FHMLGRI 261
Query: 432 LHNKRETDNLVKMD------QDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHE 485
L+ KR N K+ + + + + R L+ D P +++ + + ++DFL E
Sbjct: 262 LYAKRVNPNAPKLTRFSQKRRSSVPIPEPTERTDLEND-PSDIITMSSMSSGKLVDFLFE 320
Query: 486 N 486
N
Sbjct: 321 N 321
>gi|339251740|ref|XP_003372892.1| cell cycle checkpoint protein RAD17 [Trichinella spiralis]
gi|316968739|gb|EFV52974.1| cell cycle checkpoint protein RAD17 [Trichinella spiralis]
Length = 399
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 109/261 (41%), Gaps = 44/261 (16%)
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
+ +L++TG +G GKT TVR + + R+ EW +C + +L +F
Sbjct: 15 SRILLVTGCSGCGKTITVRLLCEDMRIRVVEWKGCIDN------GDCVI----SEQLRQF 64
Query: 238 ENFVERIRRYGST--SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIP 295
E F+ R Y + + + + IL+ + LPV + L Q L + +IP
Sbjct: 65 EEFLLRSSHYSTIVQTDEYDNDYQDRVILVKEILPVFTRDPSL--LHQILKKFWSTFNIP 122
Query: 296 TAVVLTECGKADSVDSTAQSF-EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
+LTE D D + F E+Q L G V+ N I SI + L I QE
Sbjct: 123 VIFILTE----DGSDGSRAIFPPEVQQNL---GISTVSFNAIPVTSIIKHLKNILIQEAK 175
Query: 355 SLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSI 414
L+ + VA+ S GD+R A+ +LQ D S P +
Sbjct: 176 QLNASTLKAVAEFSQGDLRMAVNNLQLICQHDDT------SALTPCY------------- 216
Query: 415 QFGRDETLSLFHALGKFLHNK 435
RD LF +LGKFL++K
Sbjct: 217 ---RDNFCLLFPSLGKFLYDK 234
>gi|413956382|gb|AFW89031.1| hypothetical protein ZEAMMB73_227199, partial [Zea mays]
Length = 173
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
T++LW +KY P SL ELAV +KK+E+V+ W EE+L K LV+TGQ GVGK+
Sbjct: 99 TKELWVDKYTPHSLAELAVHKKKIEDVKKWMEEKLKAPKATVGGWTLVLTGQTGVGKS 156
>gi|261403496|ref|YP_003247720.1| replication factor C large subunit [Methanocaldococcus vulcanius
M7]
gi|261370489|gb|ACX73238.1| AAA ATPase central domain protein [Methanocaldococcus vulcanius M7]
Length = 509
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 42/249 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PRSL+++A K E+++ W E L K +++ G G GKT +
Sbjct: 4 WVEKYRPRSLKDVAGHEKVKEKLKTWIESYLKGENPK----PILLVGPPGCGKTTLAYAL 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E L + K + + ++++ + +TS SI G+
Sbjct: 60 ANDYGFEVIE-------------------LNASDKRNS--SAIKKVVGHAATSSSIFGKK 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D++ +G+ + + L+ +++ P ++LT + D+ A S
Sbjct: 99 ---FLIVLDEVDGISGKEDAGGVSE-LIKIIKKAKNP--IILT------ANDAYATSIRS 146
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L + + LNP+ SI + L KI ++E + + + ++AQ S GD+R AI
Sbjct: 147 LLPYV-----EIIQLNPVHTNSIYKVLKKIAQKEGLDVDDKTLKMIAQHSAGDLRSAIND 201
Query: 379 LQFSSLKQD 387
L+ +L D
Sbjct: 202 LEALALSGD 210
>gi|444320683|ref|XP_004180998.1| hypothetical protein TBLA_0E04250 [Tetrapisispora blattae CBS 6284]
gi|387514041|emb|CCH61479.1| hypothetical protein TBLA_0E04250 [Tetrapisispora blattae CBS 6284]
Length = 700
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 138/330 (41%), Gaps = 70/330 (21%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR- 196
+W +KP +LE++ + +KK ++ + + +D +L++TG +G K+ ++
Sbjct: 82 MWFNIFKPSTLEDVCIHKKKANDIITALKGIMSGKED---IRILLLTGPSGCSKSTFIKE 138
Query: 197 -------QIASHLGARLY--EWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR-R 246
Q +H L+ E P+ + EY ++ L S +D F F++ + R
Sbjct: 139 ASKILIPQYRAHGITSLFSEESGEHLPSTYIEYSNDA--VLNGISSIDSFYEFLKESKYR 196
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTEC 303
GS + +I+L++D P T + ++ +L + S+ + P + LTEC
Sbjct: 197 VGS----------NLSIILVEDFPNLFHITTRQNFQKVILEWLYSSELILPPLVICLTEC 246
Query: 304 GKADSVDSTAQSFEELQS----------ILVDAGARKVALNPITNGSIKRTLSKICRQEQ 353
D+ ++ SF S IL +++ NPI K+ L+ +C + +
Sbjct: 247 EIEDTENNFRHSFGIETSWTAPTVLGNEILNHPKLKQIKCNPINMTLTKKQLNFLCNENK 306
Query: 354 YSLST----EQIDLVAQ---ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKA 406
+ +Q D++ + S GDIR I +LQF + S + P
Sbjct: 307 TLIMANNKWQQKDIIIKDISQSTGDIRSGIAALQF------------WATSSSDLP---- 350
Query: 407 DGHGGFSIQFGRDETLSLFHALGKFLHNKR 436
R +S FHA+G+ +H +
Sbjct: 351 --------IITRKSPVSFFHAVGRIIHGSK 372
>gi|73669571|ref|YP_305586.1| replication factor C large subunit [Methanosarcina barkeri str.
Fusaro]
gi|110287808|sp|Q46AT6.1|RFCL_METBF RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|72396733|gb|AAZ71006.1| replication factor C large subunit [Methanosarcina barkeri str.
Fusaro]
Length = 642
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 42/245 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P++L+E+ +K V+ +R W E+ L D+ +V+ G AGVGKT+T
Sbjct: 7 WAEKYRPQTLKEIVGNKKAVQYLRTWAEKWLSGIPDR---RAVVLHGPAGVGKTST---- 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
+H AR +W+ +E + +ER+ ++ + G
Sbjct: 60 -AHALARDLDWEV----------------IELNASDQRTAGVIERVAGSAASMNTFFGGK 102
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++++D+ +G TA + + ++++T P ++ A+ + +
Sbjct: 103 R---LIILDEADNIHG-TADRGGMRAIAGIIKNTLQPIVLI------ANDIYGLTPTIRN 152
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L ++ + + S+ L K+C E S + I +A+ +GGD+R AI
Sbjct: 153 L--------CLEIKFGSVQSRSMVPALKKVCESEDILCSPDAIQQIAEGAGGDLRSAIND 204
Query: 379 LQFSS 383
LQ ++
Sbjct: 205 LQAAA 209
>gi|20090661|ref|NP_616736.1| replication factor C large subunit [Methanosarcina acetivorans C2A]
gi|42559496|sp|Q8TPU4.1|RFCL_METAC RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|19915708|gb|AAM05216.1| replication factor C, large subunit [Methanosarcina acetivorans
C2A]
Length = 607
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 48/248 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEE---RLGDSKDKFSTNVLVITGQAGVGKTATV 195
WAEKY+PR+LE++ +K V + RAW EE R+ + T +++ G AG+GKT++
Sbjct: 12 WAEKYRPRTLEDVVGNKKAVRDFRAWAEEWQSRIPE------TRAVILYGPAGIGKTSS- 64
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
+H AR +WD +E + +E+I ++ ++
Sbjct: 65 ----AHALARDMDWDV----------------IELNASDQRTAGVIEKIAGSAASMNTLF 104
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
G S ++++D+ +G TA + + +++ T P ++ A+ + +
Sbjct: 105 G---SKRLIILDEADNIHG-TADRGGMRAISGIIKGTLQPIVLI------ANDIYGLTPT 154
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
L ++ + + S+ L K+C E S E + +A+ +GGD R A
Sbjct: 155 IRNL--------CLEIKFGSVQSRSMVPALKKVCGAEGVYCSQEALLQIAENAGGDFRSA 206
Query: 376 ITSLQFSS 383
I LQ ++
Sbjct: 207 INDLQAAA 214
>gi|336476698|ref|YP_004615839.1| AAA ATPase [Methanosalsum zhilinae DSM 4017]
gi|335930079|gb|AEH60620.1| AAA ATPase [Methanosalsum zhilinae DSM 4017]
Length = 507
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 40/251 (15%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P SL E+ +K VE ++ W ++ +K +++ G+AG+GKT+ +
Sbjct: 7 WAEKYRPGSLSEIVGNKKAVENLQEWAQKWTYTIPEK---RAVILAGRAGIGKTSAAHAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G W+ +E + + VER+ S S+ G S
Sbjct: 64 ANDFG-----WEI----------------IELNASDKRTADAVERVAGSASKMHSLDG-S 101
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
S ++++D+ +G + R + +++ T P ++ + + ST +S
Sbjct: 102 TSRRLIILDEADNLHGSSDRGGTR-AIGNIIKRTKQPIVLIANDL---YGISSTVRS--- 154
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ ++ N I + S+ L KICR+E ++ +A+ + GD+R A+
Sbjct: 155 --------NSLEIKFNSIQSRSMVPALKKICREEGIMCGVGVLEKIAENADGDLRSAVND 206
Query: 379 LQFSSLKQDPM 389
LQ S+ +D +
Sbjct: 207 LQAVSMGRDEI 217
>gi|412990353|emb|CCO19671.1| predicted protein [Bathycoccus prasinos]
Length = 528
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 33/269 (12%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE---RLGDSKDKFSTNVLVITGQAGV 189
S ++QLWA+KYKP + EL + V ++R W E + G+ + K ++I+G G+
Sbjct: 17 SESKQLWADKYKPTRISELIGNGRCVADLRRWLLEWQNKQGNKEKKNKCKAVLISGPPGI 76
Query: 190 GKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS 249
GKT++ + + LG + E + + + +TGL ++ E R +
Sbjct: 77 GKTSSAIIVCTQLGFSVMEVNASDSR--NKASKDVQTGLSGSTSNQVKELVTNRGLNFLK 134
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTECGKADS 308
T+ + +L++D++ +G +A +R L+ ++ + IP +
Sbjct: 135 TTI------HKNQVLIMDEV---DGMSAGDRGGISDLIDTIKRSKIPIICICN------- 178
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
D +Q + LQ+ + ++ T I LS I ++E + + + ++D V ++
Sbjct: 179 -DRYSQKLKALQNHCFELNFQRP-----TKQQIHGRLSLIMKEENFHMQSNELDTVIESC 232
Query: 369 GGDIRQAITSLQFSSLKQDPMLNLSLSIS 397
GDIR + LQ L+ SLSIS
Sbjct: 233 NGDIRLILNQLQLRKLRTG-----SLSIS 256
>gi|289192746|ref|YP_003458687.1| AAA ATPase central domain protein [Methanocaldococcus sp. FS406-22]
gi|288939196|gb|ADC69951.1| AAA ATPase central domain protein [Methanocaldococcus sp. FS406-22]
Length = 515
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 113/249 (45%), Gaps = 42/249 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL+E+A K E+++ W E L K +++ G G GKT +
Sbjct: 4 WVEKYRPKSLKEVAGHDKVKEKLKTWIESYLKGEHPK----PILLVGPPGCGKTTLAYAL 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + +E + + ++++ + +TS SI G+
Sbjct: 60 ANDYGFEV---------------------IELNASDKRSASVIKKVVGHAATSSSIFGKK 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D++ +G+ + + + ++ ++ + ++LT + D+ A +
Sbjct: 99 ---FLIILDEVDGISGKEDAGGVSELIKVIKKAKN---PIILT------ANDAYAPAIRN 146
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L + + LNP+ S+ + L KI ++E + + + ++AQ S GD+R AI
Sbjct: 147 LLPYV-----EVIQLNPVHTNSVYKVLKKIAQKEGLDVDDKTLKMIAQHSAGDLRSAIND 201
Query: 379 LQFSSLKQD 387
L+ +L D
Sbjct: 202 LEALALSGD 210
>gi|389860408|ref|YP_006362647.1| replication factor C large subunit [Thermogladius cellulolyticus
1633]
gi|388525311|gb|AFK50509.1| replication factor C large subunit [Thermogladius cellulolyticus
1633]
Length = 427
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 114/243 (46%), Gaps = 43/243 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W KY+P++L+E Q + + +W+E+ + G+ K K + ++ G G GK++ V+
Sbjct: 7 WIIKYRPKNLDEFVDQEEAKKVFISWYEDWKKGEVKKKAA----LLYGPPGTGKSSFVQA 62
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
A+ G LYE + +Y K D ++R+ R ++S S+ G
Sbjct: 63 FAATYGLELYEMNAS----------------DYRRKGD-----IDRLLRVTASSGSLSGR 101
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K ++ +D++ N ++ L L L+ S H P + D+ + +
Sbjct: 102 GK---LIFLDEVDGLNPKSDAGGLEAILQLIENSKH-PVVMAAN-----DAYNPNIRPLR 152
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++ S+L++ + G++ + LS+IC +E+ + +D++A+ S GD+R AI
Sbjct: 153 DV-SLLIE-------FKRLREGAVVQLLSRICEKERVRCDKDALDVIAKRSEGDLRSAIN 204
Query: 378 SLQ 380
L+
Sbjct: 205 DLE 207
>gi|294657698|ref|XP_459997.2| DEHA2E15972p [Debaryomyces hansenii CBS767]
gi|199432882|emb|CAG88250.2| DEHA2E15972p [Debaryomyces hansenii CBS767]
Length = 604
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 150/350 (42%), Gaps = 62/350 (17%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
+ + + QQ W +KY P E++ + +K++EV+ + T +L++TG +G
Sbjct: 46 TCTDTFQQQWIDKYTPTRSEDICINPRKLKEVKETLSNMISGID---PTKLLILTGPSGS 102
Query: 190 GKTATVRQIASHLGAR----------LYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
K+ T++ +A+ + R + ++ + W EY+ T + + EF N
Sbjct: 103 SKSTTIKVLANEIIPRSATSNNFESYMTRQESTSHDNWIEYIDTIVTDTPQSKQFSEFLN 162
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVV 299
+ R GS + +I+LI+DLP + R L V + H +V
Sbjct: 163 --DARYRIGS----------NLSIILIEDLPNIFHADILSKFRGNLNEWVNTDHQLPPLV 210
Query: 300 LTECGKADSVDSTAQSFEELQSIL-VD-----------AGARKVALNPITNGSIKRTLSK 347
L + + Q + +++ L VD +++ N I +K++++K
Sbjct: 211 LCLSEIELTQEQRNQDYFNIENNLTVDTLLGREFLSQRGKVKQIKFNSIAASFMKKSMNK 270
Query: 348 ICRQEQYSLS----TEQIDLVAQ-ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFP 402
I +E+ + + T D + GDIR AI++LQF S +SK
Sbjct: 271 IVNEERRAFNGIAKTSINDFSSHIIESGDIRSAISNLQFWS-----------GLSK---- 315
Query: 403 EEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK 452
K G S+ R+ L+LFHA+GK +++ + +L + + D +K
Sbjct: 316 --KGRGEIFNSL---RENQLNLFHAIGKVIYSSSKYRDLDEEESDYLSIK 360
>gi|91774163|ref|YP_566855.1| replication factor C large subunit [Methanococcoides burtonii DSM
6242]
gi|121686603|sp|Q12TX1.1|RFCL_METBU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|91713178|gb|ABE53105.1| Replication factor C large subunit [Methanococcoides burtonii DSM
6242]
Length = 497
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 127/295 (43%), Gaps = 61/295 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL ++ +K V ++R W + L + +K +++ G AGVGKT+
Sbjct: 7 WVEKYRPQSLTDIVGNKKSVVDMREWAQSWLSGTPEK---RAIILHGPAGVGKTS----- 58
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+H AR +W+T +E + +ER+ S S+ G +
Sbjct: 59 AAHALARDLDWET----------------IELNASDQRTAGVIERVAGSASKMSSLTG-T 101
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC-GKADSVDSTAQSFE 317
+ ++++D+ +G R + ++++T P ++ + G SV
Sbjct: 102 TAKRLIILDEADNIHGNADRGGAR-AIGGIIKNTDQPIVLIANDLYGLTPSV-------- 152
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
+S+ ++ + N + S+ + +IC +E+ ++ +A+++GGD+R AI
Sbjct: 153 --RSLCIE-----LKFNSVQGRSMIPAMKRICVEEKIMCGVGVLEKLAESAGGDLRSAIK 205
Query: 378 SLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFL 432
LQ + +D + ++ S+ RD S+F LGK
Sbjct: 206 DLQAVATGRDEIHIEDIATSE-------------------RDTKESIFKVLGKIF 241
>gi|15669074|ref|NP_247879.1| replication factor C large subunit [Methanocaldococcus jannaschii
DSM 2661]
gi|42559434|sp|Q58294.1|RFCL_METJA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|1591562|gb|AAB98888.1| activator 1 (replication factor C), 53 KD subunit
[Methanocaldococcus jannaschii DSM 2661]
Length = 516
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 42/249 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL+++A K E+++ W E L K +++ G G GKT +
Sbjct: 4 WVEKYRPKSLKDVAGHEKVKEKLKTWIESYLKGETPK----PILLVGPPGCGKTTLAYAL 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E L + K + + ++++ + +TS SI G+
Sbjct: 60 ANDYGFEVIE-------------------LNASDKRNS--SAIKKVVGHAATSSSIFGKK 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D++ +G+ + + + ++ ++ + ++LT + D+ A S
Sbjct: 99 ---FLIVLDEVDGISGKEDAGGVSELIKVIKKAKN---PIILT------ANDAYAPSIRS 146
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L + + LNP+ S+ + L KI +E + + + ++AQ S GD+R AI
Sbjct: 147 LLPYV-----EVIQLNPVHTNSVYKVLKKIAEKEGLDVDDKTLKMIAQHSAGDLRSAIND 201
Query: 379 LQFSSLKQD 387
L+ +L D
Sbjct: 202 LEALALSGD 210
>gi|389738468|gb|EIM79666.1| hypothetical protein STEHIDRAFT_163490 [Stereum hirsutum FP-91666
SS1]
Length = 401
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 23/129 (17%)
Query: 107 ENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE 166
E+ G F PS GL A + ++W + Y+P + E+LAV ++KV +VR W
Sbjct: 75 ESNGGFKVPSIPAGLSGKGKAKAQEPVADDRMWVDVYEPETEEDLAVHKRKVNDVRQWLI 134
Query: 167 ERLGDSKD-----------------------KFSTNVLVITGQAGVGKTATVRQIASHLG 203
E SK + + +LV+TG AG GKT T+R ++ LG
Sbjct: 135 EAFQPSKPQKHRIGLFSSLVHYYQLLTSCFLRLTQRLLVLTGPAGSGKTTTLRVLSRELG 194
Query: 204 ARLYEWDTP 212
+ EW P
Sbjct: 195 FEILEWRNP 203
>gi|226288217|gb|EEH43729.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 912
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 134/323 (41%), Gaps = 71/323 (21%)
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
D + + +LV+ G AG GK+ T+ ++ +G + EW P + E++ +Y
Sbjct: 258 DRRKEKGIKILVLRGPAGSGKSTTISLLSKAIGFEILEWKNP---LGSEFLSQ-----QY 309
Query: 231 TSKLDEFENFVERIRRYGSTSPSIPGESKSSA-----------------ILLIDDLP--- 270
S +FE+F+ R ++GS + + G++K+ ++LI++ P
Sbjct: 310 ASMGAQFEDFLGRGDKFGSLTLAAAGQNKAKEPMTNGQTHSFNIRETRRVILIEEFPSSL 369
Query: 271 --VTNGRTAFE-RLRQCLLLLVRSTHI------------PTAVVLTECGKADSVDSTAQS 315
++G F +++ L + V S I P +++ S +A S
Sbjct: 370 SQTSSGLRTFRLAIQRYLAMAVPSQSIGNRLRWNTPLTGPPLIMIVSETMLGSGGISADS 429
Query: 316 F-------EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----LV 364
F EL + G + N I + + L + R+E ++I L
Sbjct: 430 FTVHRLLGPELSN---HPGTSIIDFNKIAPTFMTKALDLVLRKEARRSKRKRIPGPVVLK 486
Query: 365 AQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG----------GFSI 414
A A GD+R AI+ L+F L+ D S +++ K G G I
Sbjct: 487 AFAEMGDVRSAISGLEFMCLRGDENGGWSGTVAG----RMKKSGKGRVPLTSIEKESLEI 542
Query: 415 QFGRDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+G+ ++NKRE
Sbjct: 543 VTQREASLGIFHAVGRVVYNKRE 565
>gi|256811408|ref|YP_003128777.1| replication factor C large subunit [Methanocaldococcus fervens
AG86]
gi|256794608|gb|ACV25277.1| AAA ATPase central domain protein [Methanocaldococcus fervens AG86]
Length = 488
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 112/249 (44%), Gaps = 42/249 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL+E+A K E ++ W E L K +++ G G GKT +
Sbjct: 4 WVEKYRPKSLKEVAGHDKVKERLKTWIESYLRGENPK----PILLVGPPGCGKTTLAYAL 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + N + ++++ + +TS S+ G+
Sbjct: 60 ANDYGFEVIELNASDK-------RNASS--------------IKKVVGHAATSSSVFGKK 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D++ +G+ + + L+ +++ P ++LT + D+ A S
Sbjct: 99 ---FLIVLDEVDGISGKEDAGGVSE-LIKVIKKAKNP--IILT------ANDAYATSIRN 146
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L + + LNP+ S+ + L KI +E ++ + + ++AQ S GD+R AI
Sbjct: 147 LLPYV-----EVIQLNPVHTNSVYKVLKKIAEKEGLNVDDKILKMIAQHSAGDLRSAIND 201
Query: 379 LQFSSLKQD 387
L+ +L D
Sbjct: 202 LEALALSGD 210
>gi|21226355|ref|NP_632277.1| replication factor C large subunit [Methanosarcina mazei Go1]
gi|42559489|sp|Q8Q084.1|RFCL_METMA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|20904606|gb|AAM29949.1| replication factor C subunit [Methanosarcina mazei Go1]
Length = 610
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 44/246 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+PR+L ++ RK V+++R W EE +K +++ G AG+GKT++ +
Sbjct: 12 WAEKYRPRTLGDVVGNRKAVQDLRKWAEEWQSGIPEK---RAVILYGPAGIGKTSSAHAL 68
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A + EW+ +E + +E+I ++ + G
Sbjct: 69 AGDM-----EWEV----------------IELNASDQRTAGVIEKIAGSAASMNTFFGGK 107
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC-GKADSVDSTAQSFE 317
+ ++++D+ +G TA + + +++ST P ++ + G +V
Sbjct: 108 R---LIILDEADNLHG-TADRGGMRAISGIIKSTLQPIILIANDIYGLTPTV-------- 155
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++I ++ + + + S+ L K+C E S S E + +A+ +GGD R AI
Sbjct: 156 --RNICLE-----IKFGSVQSRSMVPALKKVCESEGVSCSQEAVLQIAENAGGDFRSAIN 208
Query: 378 SLQFSS 383
LQ ++
Sbjct: 209 DLQAAA 214
>gi|452208866|ref|YP_007488980.1| Replication factor C large subunit [Methanosarcina mazei Tuc01]
gi|452098768|gb|AGF95708.1| Replication factor C large subunit [Methanosarcina mazei Tuc01]
Length = 605
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 44/246 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+PR+L ++ RK V+++R W EE +K +++ G AG+GKT++ +
Sbjct: 7 WAEKYRPRTLGDVVGNRKAVQDLRKWAEEWQSGIPEK---RAVILYGPAGIGKTSSAHAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A + EW+ +E + +E+I ++ + G
Sbjct: 64 AGDM-----EWEV----------------IELNASDQRTAGVIEKIAGSAASMNTFFGGK 102
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC-GKADSVDSTAQSFE 317
+ ++++D+ +G TA + + +++ST P ++ + G +V
Sbjct: 103 R---LIILDEADNLHG-TADRGGMRAISGIIKSTLQPIILIANDIYGLTPTV-------- 150
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++I ++ + + + S+ L K+C E S S E + +A+ +GGD R AI
Sbjct: 151 --RNICLE-----IKFGSVQSRSMVPALKKVCESEGVSCSQEAVLQIAENAGGDFRSAIN 203
Query: 378 SLQFSS 383
LQ ++
Sbjct: 204 DLQAAA 209
>gi|430811893|emb|CCJ30648.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1026
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
S + QLW KY PR+L+E+ + VE+++ W + L +S ++I+G G+GKT
Sbjct: 276 SQSCQLWTTKYAPRTLKEICGNKSLVEKLQKWLHDWLSESDGLGFYRAVLISGPPGIGKT 335
Query: 193 ATVRQIASHLGARLYEW---DTPTPTIWQEYMHNC--KTGLEYTSKLDEFENFVERIRRY 247
+ +AS G + E+ DT + + +E ++ T L LDE
Sbjct: 336 TSAHLVASLEGYDVLEFNASDTRSRKLLEESLNKVYNNTSLNGFFLLDE----------- 384
Query: 248 GSTSPSIPGESKSSAILLIDDLP-VTNG-RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ K+ ++++D++ V++G + L ++ T IP + C
Sbjct: 385 -----QTAEKKKNKFVIIMDEVDGVSSGDQGGIGELNS----FIKKTQIPIICI---CN- 431
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
D ++ L D R+ +N S++ + I +E L + ID +A
Sbjct: 432 ----DRASRKLLPLDRTTFDLKFRRPDVN-----SLRSRIMSIAYREGLKLEPQAIDQLA 482
Query: 366 QASGGDIRQAITSLQFSSLKQDPM 389
+++ GDIRQ I L L Q+ M
Sbjct: 483 ESTHGDIRQIINILSSWKLSQNSM 506
>gi|449677025|ref|XP_002157860.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Hydra
magnipapillata]
Length = 545
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 33/251 (13%)
Query: 208 EWDTPT--------PTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS--PSIPGE 257
EW PT + W+E++ + S+ +F F+ R RY + I E
Sbjct: 7 EWINPTTNEYQERSSSNWREFL------VSQDSQSQQFTEFLLRANRYNQVAIFGDIKNE 60
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++LI+DLP E+ L + P +++++ ++SV
Sbjct: 61 NLQKKVVLIEDLP-NFALHKPEKFHNILREYLAGGRSPIIIIMSDGHSSESVHLVFP--- 116
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL-----STEQIDLVAQASGGDI 372
+ I V + ++ N ++ ++ +T++ I +E S S + ++A AS GDI
Sbjct: 117 --KHIQVMLNIKVISFNSVSMTALTKTMNSIIEKEMSSSNITIPSKDTCSMLATASNGDI 174
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGH----GGFSIQFGRDETLSLFHAL 428
R I SLQF L + L S +I K N K + H G ++ +D +L LF AL
Sbjct: 175 RSCINSLQF--LCTNCFLPKSKNIEKNNSKGRKYNSHKNKDGSGTLINCKDSSLFLFRAL 232
Query: 429 GKFLHNKRETD 439
GK L+ K+ ++
Sbjct: 233 GKILYCKKNSE 243
>gi|330507531|ref|YP_004383959.1| replication factor C large subunit [Methanosaeta concilii GP6]
gi|328928339|gb|AEB68141.1| replication factor C large subunit [Methanosaeta concilii GP6]
Length = 534
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 42/260 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L+++ K ++++R W L + + T +++ G AG GKT+ +
Sbjct: 7 WTEKYRPATLKQVLGNGKAIDDLREWA---LSWERSEPITGAVILYGPAGTGKTSAALAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A ++WD +E + +E+I S S + G+
Sbjct: 64 AHD-----FDWDY----------------IEMNASDARTAGMIEKIAVPASRSQTFSGKP 102
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++++D+ +G TA +L LVR+T P ++ E + E
Sbjct: 103 R---LVILDEADNLHG-TADRGGAAAMLRLVRNTLQPVILIANE-------------YYE 145
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L DA R + + + +I + L IC+ E + + + +A+ +GGD+R I
Sbjct: 146 IDKSLRDA-TRGIQFRSVRSTTIAQALRAICQAEGIDCNPDLLVTIAERAGGDMRSGIND 204
Query: 379 LQFSSLKQDPMLNLSLSISK 398
LQ ++ Q+ + L+ ++
Sbjct: 205 LQAAAEGQETLREEDLATAQ 224
>gi|340505325|gb|EGR31667.1| mitochondrial processing peptidase beta, putative [Ichthyophthirius
multifiliis]
Length = 778
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 53/263 (20%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFE---------ERLGDSKD---KFSTNVLVI 183
+ LW KY P+ L+ ++++++ W + E G SK+ S +I
Sbjct: 93 KHLWTHKYSPQYLDSCVGNFQQIKKIELWLQNWHSVVIKKETKGQSKNWKENTSAKACLI 152
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
+G G+GKT+TVR +A ++ EW+ + SK ++ E V+
Sbjct: 153 SGPPGIGKTSTVRLLAKKYEYQIIEWNAS----------------DVRSK-NQLEQLVKP 195
Query: 244 IRRYGSTSPSIPGESK--SSAILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
+ +S + G+S + AI+L+D++ +++G Q LL +++ T IP V
Sbjct: 196 L-----SSNCVLGQSNRNNKAIILMDEIDGMSSGDIGGS---QQLLKIIKETQIPIFCV- 246
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
C D Q + + + D + + LSKIC QE+
Sbjct: 247 --CN-----DRYNQKLKSIANYCYD-----IRFFKPQKQQVAALLSKICVQEKIKADNLG 294
Query: 361 IDLVAQASGGDIRQAITSLQFSS 383
++L+A+ + DIRQAI LQ S
Sbjct: 295 LELLAENANCDIRQAINYLQMES 317
>gi|441432354|ref|YP_007354396.1| putative replication factor C small subunit [Acanthamoeba polyphaga
moumouvirus]
gi|440383434|gb|AGC01960.1| putative replication factor C small subunit [Acanthamoeba polyphaga
moumouvirus]
Length = 322
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 59/274 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV-LVITGQAGVGKTATVRQ 197
W EKY+P +++E+ +++ + E++ NV L+ TG G+GKT+T R
Sbjct: 7 WIEKYRPATIDEIIFDINIRKQINIFLEDK---------KNVHLIFTGPPGIGKTSTARC 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
IA T+ EYM LE + D R S S IP
Sbjct: 58 IAK--------------TMLGEYME--AGYLEINAAED---------RGVRSMSTRIPPF 92
Query: 258 SK------SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
K +S I+L+D+ + + ++ + +++ T + T C DS
Sbjct: 93 CKKVVDFTTSKIILLDEADIMTSKCQYD-----INNMIKEFGKKTKFIFT-CN-----DS 141
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
T + E+LQS+ R + +T+ I LSKIC +E +D + S GD
Sbjct: 142 T-KIIEDLQSV-----CRILRFKKLTDQQISSYLSKICEKENIEYDKPGLDTICYISYGD 195
Query: 372 IRQAITSLQFSSLKQDPML-NLSLSISKPNFPEE 404
+R++I LQ ++ + + N L I + PEE
Sbjct: 196 MRKSINDLQKTACTYNKVTKNTVLKICRVPDPEE 229
>gi|240104120|ref|YP_002960429.1| replication factor C large subunit [Thermococcus gammatolerans EJ3]
gi|239911674|gb|ACS34565.1| Replication factor C, large subunit (rfcL) [Thermococcus
gammatolerans EJ3]
Length = 507
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 45/248 (18%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
+ T+ W EKY+PR L E+ Q K +E+VRAW E L + K L++ G GVGKT
Sbjct: 3 AMTEVPWVEKYRPRKLSEIVNQEKAIEQVRAWVEAWLHGNPPK--KKALILAGPPGVGKT 60
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
TV +A+ G + E + E E+I RY +
Sbjct: 61 TTVYALANEYGFEVIELNASD------------------------ERTYEKIERYVQAAY 96
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
++ K ++ +D+ N + R L+ R+ I +A E K + +
Sbjct: 97 TMDILGKRRKLIFLDE--ADNIEPSGAREIAKLIDRARNPIIMSANHYWEVPK--EIRNR 152
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
AQ E +T I + L +I ++E ++ E + +A+ + GD+
Sbjct: 153 AQIVE---------------YKRLTQRDIIKALVRILKREGKTVPKEILYEIAKRANGDL 197
Query: 373 RQAITSLQ 380
R AI LQ
Sbjct: 198 RAAINDLQ 205
>gi|393909555|gb|EFO19997.2| hypothetical protein LOAG_08495 [Loa loa]
Length = 547
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
+++ +++E+LAV KK++E+R W +++ G + +L++TG G GKT V+ +
Sbjct: 69 DRFPLQNVEQLAVNPKKIDELRRWMQKKKGRCR---GCKLLLLTGPTGSGKTTAVKMLCR 125
Query: 201 HLGARLYEWD-TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESK 259
L L EW+ + + ++ + G E + ++ + F E ++ S SI +S
Sbjct: 126 ELKLELIEWNCSESYDVFYD-----PEGEEVVYEENQVKKFAEFLK--SSDRGSIE-KSV 177
Query: 260 SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEEL 319
S ++L++ LP + L + + +R+T ++++ DS
Sbjct: 178 SQKVILVEQLPNVFYQNP-SILHETMTNTIRNTVCMYIFIMSD---IDSCWYLNPKRILP 233
Query: 320 QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSL 379
+I G ++ N + + L +I + + S QI +A S GDIR AI +L
Sbjct: 234 ANIRYQLGFEELTFNASATIFLSKALRRITSLLKVNASPLQIKRIADNSSGDIRTAIHNL 293
Query: 380 QFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFS--IQFGRDETLSLFHALGKFLHNKR- 436
Q DG+ F+ + +H+LGK L+ KR
Sbjct: 294 QLC-----------------------FDGYREFNEICPLHSSTLVDPYHSLGKLLYAKRC 330
Query: 437 -ETDNLVKMDQDAFVV--KDKFSR-LPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ D K ++ + + +SR P K D E VL ++ A ++ FLHE+
Sbjct: 331 NKADGDWKKAEEKLKIELRKVYSRDYPPKDDISE-VLDKSGMNADKLVIFLHEH 383
>gi|225683300|gb|EEH21584.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 929
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 71/323 (21%)
Query: 171 DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEY 230
D + + +LV+ G AG GK+ T+ ++ +G + EW P + E++ +Y
Sbjct: 275 DRRKEKGIKILVLRGPAGSGKSTTISLLSKAIGFEILEWKNP---LGSEFLSQ-----QY 326
Query: 231 TSKLDEFENFVERIRRYGSTSPSIPGESKSSA-----------------ILLIDDLP--- 270
S +FE+F+ R ++GS + + G++K+ ++LI++ P
Sbjct: 327 ASMGAQFEDFLGRGDKFGSLTLAAAGQNKAKEPMTNGQTHSFNIRETRRVILIEEFPSSL 386
Query: 271 --VTNGRTAFE-RLRQCLLLLVRSTHI------------PTAVVLTECGKADSVDSTAQS 315
++G F +++ L + V S I P +++ S +A S
Sbjct: 387 SQTSSGLRTFRLAIQRYLAMAVPSQSIGNRLRWNTPLTGPPLIMIVSETMLGSGGISADS 446
Query: 316 F-------EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID----LV 364
F EL + G + N I + + L + ++E ++I L
Sbjct: 447 FTVHRLLGPELSN---HPGTSIIDFNKIAPTFMTKALDLVLKKEARRSKRKRIPGPVVLK 503
Query: 365 AQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG----------GFSI 414
A A GD+R AI+ L+F L+ D S +++ K G G I
Sbjct: 504 AFAEMGDVRSAISGLEFMCLRGDENGGWSGTVAG----RMKKSGKGRVPLTSIEKESLEI 559
Query: 415 QFGRDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+G+ ++NKRE
Sbjct: 560 VTQREASLGIFHAVGRVVYNKRE 582
>gi|312083949|ref|XP_003144074.1| hypothetical protein LOAG_08495 [Loa loa]
Length = 526
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
+++ +++E+LAV KK++E+R W +++ G + +L++TG G GKT V+ +
Sbjct: 44 DRFPLQNVEQLAVNPKKIDELRRWMQKKKGRCR---GCKLLLLTGPTGSGKTTAVKMLCR 100
Query: 201 HLGARLYEWD-TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESK 259
L L EW+ + + ++ + G E + ++ + F E ++ S SI +S
Sbjct: 101 ELKLELIEWNCSESYDVFYD-----PEGEEVVYEENQVKKFAEFLK--SSDRGSIE-KSV 152
Query: 260 SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEEL 319
S ++L++ LP + L + + +R+T ++++ DS
Sbjct: 153 SQKVILVEQLPNVFYQNP-SILHETMTNTIRNTVCMYIFIMSD---IDSCWYLNPKRILP 208
Query: 320 QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSL 379
+I G ++ N + + L +I + + S QI +A S GDIR AI +L
Sbjct: 209 ANIRYQLGFEELTFNASATIFLSKALRRITSLLKVNASPLQIKRIADNSSGDIRTAIHNL 268
Query: 380 QFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFS--IQFGRDETLSLFHALGKFLHNKR- 436
Q DG+ F+ + +H+LGK L+ KR
Sbjct: 269 QLC-----------------------FDGYREFNEICPLHSSTLVDPYHSLGKLLYAKRC 305
Query: 437 -ETDNLVKMDQDAFVV--KDKFSR-LPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+ D K ++ + + +SR P K D E VL ++ A ++ FLHE+
Sbjct: 306 NKADGDWKKAEEKLKIELRKVYSRDYPPKDDISE-VLDKSGMNADKLVIFLHEH 358
>gi|294495084|ref|YP_003541577.1| replication factor C large subunit [Methanohalophilus mahii DSM
5219]
gi|292666083|gb|ADE35932.1| replication factor C large subunit [Methanohalophilus mahii DSM
5219]
Length = 489
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 41/247 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
Q WAEKY+P L ++ K ++ +R W EE +K + +++G AGVGKT+
Sbjct: 5 QDWAEKYRPAKLADVVGNNKPLQALRDWEEEWEHGVPEKKAA---ILSGPAGVGKTSAAH 61
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+ + +G W+ +E + +E++ S ++ G
Sbjct: 62 ALGNEMG-----WEI----------------IEMNASDQRTAGIIEKVAGSASRMSTLTG 100
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K ++++D+ +G +A + + +++ ++ P ++ + S
Sbjct: 101 IQKR--LIILDEADNMHG-SADRGGTRAITNVIKKSNQPIILIANDLYALSST------- 150
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L+S V+ + NPI SI L KIC+ E T ++ +A+ +GGD+R AI
Sbjct: 151 --LRSHCVN-----IKFNPIPQRSILPALKKICKMEGIMCGTGVLEKIAENTGGDLRSAI 203
Query: 377 TSLQFSS 383
LQ ++
Sbjct: 204 KDLQATA 210
>gi|430810977|emb|CCJ31500.1| unnamed protein product [Pneumocystis jirovecii]
Length = 659
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
S + QLW KY PR+L+E+ + VE+++ W + L +S ++I+G G+GKT
Sbjct: 106 SQSCQLWTTKYAPRTLKEICGNKSLVEKLQKWLHDWLSESDGLGFYRAVLISGPPGIGKT 165
Query: 193 ATVRQIASHLGARLYEW---DTPTPTIWQEYMHNC--KTGLEYTSKLDEFENFVERIRRY 247
+ +AS G + E+ DT + + +E ++ T L LDE
Sbjct: 166 TSAHLVASLEGYDVLEFNASDTRSRKLLEESLNKVYNNTSLNGFFLLDE----------- 214
Query: 248 GSTSPSIPGESKSSAILLIDDLP-VTNG-RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ K+ ++++D++ V++G + L ++ T IP + C
Sbjct: 215 -----QTAEKKKNKFVIIMDEVDGVSSGDQGGIGELNS----FIKKTQIPIICI---CN- 261
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
D ++ L D R+ +N S++ + I +E L + ID +A
Sbjct: 262 ----DRASRKLLPLDRTTFDLKFRRPDVN-----SLRSRIMSIAYREGLKLEPQAIDQLA 312
Query: 366 QASGGDIRQAITSLQFSSLKQDPM 389
+++ GDIRQ I L L Q+ M
Sbjct: 313 ESTHGDIRQIINILSSWKLSQNSM 336
>gi|383621832|ref|ZP_09948238.1| replication factor C large subunit [Halobiforma lacisalsi AJ5]
gi|448702682|ref|ZP_21700115.1| replication factor C large subunit [Halobiforma lacisalsi AJ5]
gi|445777243|gb|EMA28213.1| replication factor C large subunit [Halobiforma lacisalsi AJ5]
Length = 506
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K ++++ W E + D+ + +++ G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLKEWAE-----TWDEHR-DAVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + + +ERI S S ++ G
Sbjct: 58 ANDMG-----W----PV------------MELNASDNRQADVIERIAGEASKSGTLTGGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V++ + P +V E F +
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSRE-VTRVVKNANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E ++ +A+++ GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREGVEFEEEALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|91089075|ref|XP_971233.1| PREDICTED: similar to Rad17 CG7825-PA [Tribolium castaneum]
gi|270011521|gb|EFA07969.1| hypothetical protein TcasGA2_TC005551 [Tribolium castaneum]
Length = 460
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 46/336 (13%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF-STNVLVITGQAGVGKTATVRQ 197
+ ++ P+++ +LAV KK+ EV W + + D+K+ + L+I+G G GK+ T++
Sbjct: 49 FHQRLAPKTVPDLAVHSKKIAEVEHWLQNNVCDNKNNSPNAKFLLISGPPGSGKSITIQV 108
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ L + EW P + Q++ E ++ FVE + S G
Sbjct: 109 LCKKLSIDITEWVNP---LDQDF--------EVCRGANQVTRFVEFLTESKWNSLFSTGN 157
Query: 258 SKSSAILLIDDLPVTNGRTAFE---RLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K ++L+++ P T R E L +C + P V T D+ D+
Sbjct: 158 KK---VILVEEFPNTFLRNCDEFGPVLEECYY----KGNYPVIFVCT-----DTFDNKIN 205
Query: 315 SFEEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS------LSTEQIDLVAQ 366
E+L + + V ++ N +K L + Q + S + +
Sbjct: 206 LSEKLFSEDVRVKYKIATISFNGCAPTLMKSALKRAQNLVQGNPDLFKIPSQSTVTAIIS 265
Query: 367 ASGGDIRQAITSLQFSSL---KQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLS 423
+ GD++ A+ F++L P + S +K K D I RDE L
Sbjct: 266 TAMGDLKCALNQYYFAALLGTSDLPTIQTQKSGTK-----RKRDSSTSIQI-MSRDENLG 319
Query: 424 LFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLP 459
LFHALG+ L+ K + + D D V ++F+ P
Sbjct: 320 LFHALGRVLNPKLGENGRLACDFDRLV--NEFTTQP 353
>gi|390961473|ref|YP_006425307.1| replication factor C large subunit [Thermococcus sp. CL1]
gi|390519781|gb|AFL95513.1| replication factor C large subunit [Thermococcus sp. CL1]
Length = 498
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q K +E+VRAW E L + K L++ G GVGKT TV +
Sbjct: 6 WVEKYRPRKLSEIVNQEKAIEQVRAWVEAWLHGNPPK--KKALILAGPPGVGKTTTVYAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + E E+I RY + ++
Sbjct: 64 ANEYGFEVIELNASD------------------------ERTFEKIERYVQAAYTLDILG 99
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K ++ +D+ A R+ L+ R+ + + +A + E
Sbjct: 100 KRRKLIFLDEADNIEPSGA----REIAKLIDRAR--------------NPIIMSANHYWE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + + A+ V +T I + L +I ++E ++ E + +A+ + GD+R AI
Sbjct: 142 VPREIRNK-AQIVEYKRLTQRDIIKALIRILKREGKTVPKEILYEIAKRASGDLRAAIND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|365983348|ref|XP_003668507.1| hypothetical protein NDAI_0B02290 [Naumovozyma dairenensis CBS 421]
gi|343767274|emb|CCD23264.1| hypothetical protein NDAI_0B02290 [Naumovozyma dairenensis CBS 421]
Length = 748
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 153/353 (43%), Gaps = 83/353 (23%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-----GDSKDKFSTNVLVITGQAGVGKTA 193
W +KY+P SL+E+ V ++K+++V+ FE L D D + +L++TG +G K+
Sbjct: 90 WYKKYEPASLDEVVVHKQKLKDVKDVFESMLHSHISNDDADGYP-RILLLTGPSGSSKST 148
Query: 194 TVRQIASHLGARLYEWD--TPTPTI-----WQEYMHNCKTG--LEYTSKL--------DE 236
++Q+A L + + + TI ++ M + +T +EY++ L D
Sbjct: 149 LIKQLAKELIPKYRNTNGLNSSGTISLMGKTRKPMEDVETNDIIEYSNDLLLNGMKTMDA 208
Query: 237 FENFVERIRRYGSTSPSIPGESKSSAILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHI- 294
F F+ + + + S ++LI+DLP V + T + ++ LL + S+ I
Sbjct: 209 FREFLNQCKYKCGNNLS---------VILIEDLPNVFHAETRY-IFQKSLLEWLYSSDIK 258
Query: 295 --PTAVVLTEC------------GKADSVDSTAQSFEEL-QSILVDAGARKVALNPITNG 339
P + LTEC + ++DST + L + IL +++ N I
Sbjct: 259 LPPLVICLTECEIERDNSYSSFTTSSFNIDSTFTAETVLGREILSHPRLKRIKFNSINRT 318
Query: 340 SIKRTLSKIC--------RQEQYSLSTEQI-DLVAQAS------GGDIRQAITSLQFSSL 384
+K L K+C + +++ I DL++ S GDIR I SL+ +
Sbjct: 319 LMKSHLMKLCEVNKELLIKNDKWKDRIRFIKDLISSNSTTGTGGNGDIRSGIASLEMWAR 378
Query: 385 KQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
+ + SL I R+ ++S FH +G+ ++ ++
Sbjct: 379 SKSKTDDTSLLIDST------------------RESSISYFHGIGRIIYGSKD 413
>gi|225560144|gb|EEH08426.1| cell cycle control protein [Ajellomyces capsulatus G186AR]
Length = 967
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 152/388 (39%), Gaps = 99/388 (25%)
Query: 111 RFLTPSRFEGLVNPDHDSASASSSTQQL-------WAEKYKPRSLEELAVQRKKVEEVRA 163
RFL P + A S+S QL WAE+Y P L+EL
Sbjct: 269 RFLLPGGTSTAHGVEPSRARDSTSPTQLFTRGIRPWAEEYAPTDLDELV----------- 317
Query: 164 WFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN 223
VLV+ G AG GK+ T+ +++ +G + EW +P + E+
Sbjct: 318 ---------------RVLVLRGPAGSGKSTTISILSNTIGFEIVEWKSP---LGSEFSSQ 359
Query: 224 CKTGLEYTSKLDEFENFVERIRRYGS-------TSPS-----------IPGESKSSAILL 265
Y S +FE+F+ R ++GS PS I ++ ++L
Sbjct: 360 G-----YVSMGAQFEDFLGRSDKFGSLFLSGGGREPSHSATHGNSDHLIASTTEKRRVIL 414
Query: 266 IDDLPVT-----NGRTAFERLRQCLLL-----------LVRSTHI---PTAVVLTECGKA 306
+++ P + +G AF Q L+ +R T+I P ++++E
Sbjct: 415 VEEFPSSLNQSSSGLRAFRLALQSYLVTATPRQPFDNQFIRDTNISSPPLIMIVSETMLG 474
Query: 307 -DSVDSTAQSFEEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID- 362
+ S + + L I + N + + + + + ++E +++
Sbjct: 475 WGGISSDSFTVHRLLGPEISSHPSVSIIDFNRVAPTFMSKAIDLVLKKEARRSKRKRVPG 534
Query: 363 ---LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ---- 415
L A A GDIR AI++L+F L+ + N S +++ K GG +
Sbjct: 535 PEVLKAFAQMGDIRSAISALEFMCLRGEEDTNWSGTVAG----RMKRPSRGGIPLTSMEK 590
Query: 416 ------FGRDETLSLFHALGKFLHNKRE 437
R+ +L +FHA+GK ++NKRE
Sbjct: 591 ESLEMVTQREASLGIFHAVGKVVYNKRE 618
>gi|440804114|gb|ELR24992.1| replication factor rfc1 c terminal domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 977
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 49/272 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFE---------ERLGDSKDKFST--NVLVITG 185
+LW EKYKP+S +E+ V++++ W + + G++ + +T N +++G
Sbjct: 399 ELWVEKYKPKSTKEVIANPAAVKKLQDWLQGWQRSEVQRAKRGEAPARGATQKNAALLSG 458
Query: 186 QAGVGKTATVRQIASHLGARLYEW---DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
G+GKT T +A+ G E+ DT + + +E++ L EF F
Sbjct: 459 PPGIGKTTTAHLVAAECGYYALEFNASDTRSKKMIKEHLAQSTE----NRGLAEF--FTG 512
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLT 301
R G T +L++D++ +G ++ +R ++ L++ THIP ++
Sbjct: 513 RGGEDGKT------------VLIMDEV---DGMSSGDRGGMAEIIALIKKTHIP---IIC 554
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D + L + +D + L T I +++I ++E ++ +
Sbjct: 555 LCN-----DRASAKVRSLANYCLD-----IQLQKPTTQQILGRVTQILQRENIAIDNATL 604
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPMLNLS 393
+ AS GD+RQ + LQ ++K + LS
Sbjct: 605 TRIVDASNGDVRQLLNMLQMLTVKSKDLGTLS 636
>gi|371944962|gb|AEX62783.1| putative replication factor C small subunit [Moumouvirus Monve]
Length = 233
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 59/274 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV-LVITGQAGVGKTATVRQ 197
W EKY+P +++E+ +++ + E++ NV L+ TG G+GKT+T R
Sbjct: 7 WIEKYRPATIDEIIFDINIRKQINIFLEDK---------KNVHLIFTGPPGIGKTSTARC 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
IA T+ EYM LE + D R S S IP
Sbjct: 58 IAK--------------TMLGEYME--AGYLEINAAED---------RGVRSMSTRIPPF 92
Query: 258 SK------SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
K +S I+L+D+ + + ++ + +++ T + T C DS
Sbjct: 93 CKKVVDFTTSKIILLDEADIMTSKCQYD-----INNMIKEFGKKTKFIFT-CN-----DS 141
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
T + E+LQS+ R + +T+ I LSKIC +E +D + S GD
Sbjct: 142 T-KIIEDLQSV-----CRILRFKKLTDQQISSYLSKICEKENIEYDKPGLDTICYISYGD 195
Query: 372 IRQAITSLQFSSLKQDPML-NLSLSISKPNFPEE 404
+R++I LQ ++ + + N L I + PEE
Sbjct: 196 MRKSINDLQKTACTYNKVTKNTVLKICRVPDPEE 229
>gi|451927446|gb|AGF85324.1| replication factor C small subunit [Moumouvirus goulette]
Length = 322
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 59/274 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV-LVITGQAGVGKTATVRQ 197
W EKY+P +++E+ +++ + E++ NV L+ TG G+GKT+T R
Sbjct: 7 WIEKYRPATIDEIIFDINIRKQINIFLEDK---------KNVHLIFTGPPGIGKTSTARC 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
IA T+ E+M LE + D R S S IP
Sbjct: 58 IAK--------------TMLGEHMQ--AGYLEINAAED---------RGVRSMSTRIPPF 92
Query: 258 SK------SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
K +S I+L+D+ + + ++ + +++ T + T C DS
Sbjct: 93 CKKVIDFTTSKIILLDEADIMTSKCQYD-----INNMIKEFGNKTKFIFT-CN-----DS 141
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
T + E+LQS+ R + +T+ I LSKIC +E+ +D + S GD
Sbjct: 142 T-KIIEDLQSV-----CRILRFKKLTDNQISSYLSKICEKEKIEYDKSGLDTIYYISYGD 195
Query: 372 IRQAITSLQFSSLKQDPML-NLSLSISKPNFPEE 404
+R++I LQ ++ + + N L I + PEE
Sbjct: 196 MRKSINDLQKTACTYNKVTKNTVLKICRVPDPEE 229
>gi|229582087|ref|YP_002840486.1| replication factor C large subunit [Sulfolobus islandicus
Y.N.15.51]
gi|259585461|sp|C3NHF4.1|RFCL_SULIN RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|228012803|gb|ACP48564.1| AAA ATPase central domain protein [Sulfolobus islandicus Y.N.15.51]
Length = 405
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+PRSL+++ Q +E++ W E L K + +++ G GVGKT +
Sbjct: 4 WFLKYRPRSLKDVENQDGAKKELQEWIESWLNG---KPNAKAVLLHGPPGVGKTTLAEAV 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L E + + KL + + E+ YGS +
Sbjct: 61 AHDYNLELLEMNASD-----------------SRKLQDIKGVAEKASVYGSIFGT----- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++L+D++ N R + Q +L L+ T P +++T + D + E
Sbjct: 99 -RGKLILLDEVDGINVREDTGAI-QGILELIEKTKYP--IIMT------ANDPWNPALRE 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + V LN + ++R L KIC+ E+ E ++ + S GD R AI
Sbjct: 149 LRN-----KTKMVGLNKLGKYPLRRLLKKICQAEKIICDDEALNYIIDTSEGDTRYAINM 203
Query: 379 LQ 380
LQ
Sbjct: 204 LQ 205
>gi|150951255|ref|XP_001387546.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149388443|gb|EAZ63523.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 623
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 144/357 (40%), Gaps = 69/357 (19%)
Query: 106 KENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF 165
K N + + P++ + P S S W +KY P ++ + +K+ +VR
Sbjct: 63 KFNATKQVQPAKIINDLVPRVTSNQVEQSQSLQWIDKYAPSKSNDICINPQKLRQVRQLL 122
Query: 166 EERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARL--YEWD-------TPTPTI 216
+ + + K +LV+TG AG K+ TV+ +A + A L ++ D +
Sbjct: 123 YDMILNKSHK---RLLVLTGPAGSSKSTTVKLLADEIIASLPDHQLDEYGLLGTSSADPH 179
Query: 217 WQEYMHNCKTGLEYTSKLDEFENFVERIR-RYGSTSPSIPGESKSSAILLIDDLPVTNGR 275
W EY+ +E T++ D FE F+ + R GS + A++LI++LP
Sbjct: 180 WIEYLDG--NSVEGTNQSDSFEEFLTDAKYRVGS----------NMAVVLIEELPNVFHY 227
Query: 276 TAFERLRQCLL--LLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVD-------- 325
+ R + + T P + LT+ + S+ ++ +D
Sbjct: 228 ETLLKFRNKIREWIYCNETLPPLVICLTDVEYTSEQGTRDYSYTIDNNLTMDTLLGKELA 287
Query: 326 --AGARKVALNPITNGSIKRTLSKICRQEQ-------YSLSTEQIDLVAQASGGDIRQAI 376
A + N I N +K+T+ ++ + E+ Y TE +D + + GDIR I
Sbjct: 288 NSAQVEHIKFNSIANRFLKKTIGQLVKSERNVFNKIPYKELTEFMDEIIKI--GDIRSVI 345
Query: 377 TSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
+L + N+ +E + R+ ++LFHA+GK ++
Sbjct: 346 ---------------FNLEMWATNYSKEAK--------WYNRENQINLFHAIGKIIY 379
>gi|343959794|dbj|BAK63754.1| cell cycle checkpoint protein RAD17 [Pan troglodytes]
Length = 505
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 40/290 (13%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ FE F+ R +Y I+L++DLP R + L + L V
Sbjct: 13 YQSQIAVFEEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 71
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC 349
R P ++++ D+ Q + I + ++ NP+ + + L++I
Sbjct: 72 RIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEECSISDISFNPVAPTIMMKFLNRIV 127
Query: 350 RQEQYSLSTE-------QIDLVAQASGGDIRQAITSLQFS---------------SLKQD 387
E + ++L+ Q GDIR AI SLQFS SLK D
Sbjct: 128 TIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPTKKGMSLKSD 187
Query: 388 PMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMD 445
+L+ S KP+ F ++ G G+D +L LF ALGK L+ KR + L ++D
Sbjct: 188 AVLSKSKRRKKPDRVFENQEVQAIG------GKDVSLFLFRALGKILYCKRAS--LTELD 239
Query: 446 QDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
++ R L ++ PE+V+ +H +LH+N ++D +
Sbjct: 240 SPQLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFNLYLHQN-YIDFFME 287
>gi|448369733|ref|ZP_21556285.1| replication factor C large subunit [Natrialba aegyptia DSM 13077]
gi|445650908|gb|ELZ03824.1| replication factor C large subunit [Natrialba aegyptia DSM 13077]
Length = 512
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W D +D +++ G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDKLEEWAT-TWDDHRD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS +G W P +E + + +ERI + S ++ G
Sbjct: 58 ASDMG-----W----PV------------MELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+S + P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKSANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E ++ +A+ + GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREDIEFEEEALEKIAETTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|170116565|ref|XP_001889473.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635625|gb|EDQ99930.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 702
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--GDS-KDKFSTNVLVITGQAGVGKTA 193
+LW + Y+P + ELAV +KVE+VR W E G S K K +L +TG AG GKT+
Sbjct: 97 RLWVDIYEPTTEAELAVHVRKVEDVRRWLVEAFDGGPSGKLKKYRRILALTGPAGTGKTS 156
Query: 194 TVRQIASHLGARLYEW 209
T+R +A +G + EW
Sbjct: 157 TIRVLAREMGFDILEW 172
>gi|448545771|ref|ZP_21626182.1| replication factor C large subunit [Haloferax sp. ATCC BAA-646]
gi|448547884|ref|ZP_21627270.1| replication factor C large subunit [Haloferax sp. ATCC BAA-645]
gi|448556790|ref|ZP_21632384.1| replication factor C large subunit [Haloferax sp. ATCC BAA-644]
gi|445703581|gb|ELZ55507.1| replication factor C large subunit [Haloferax sp. ATCC BAA-646]
gi|445715695|gb|ELZ67450.1| replication factor C large subunit [Haloferax sp. ATCC BAA-645]
gi|445716139|gb|ELZ67890.1| replication factor C large subunit [Haloferax sp. ATCC BAA-644]
Length = 487
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 151/366 (41%), Gaps = 66/366 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W E D ++ +V+ G G+GKT+ +
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAEA-WDDHRE-----AVVVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W+T + +TG D E F R + + + S G S
Sbjct: 58 AADMG-----WETVELN-----ASDQRTG-------DVIERFAGRAAKNATLAGSSTGTS 100
Query: 259 KSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++++D+ +G ++R + LV+S+ P ++ E F
Sbjct: 101 -TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE-------------FY 144
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++ L +A +++ ++ SI L ICR+E + ++ +D +A+ + GD+R A+
Sbjct: 145 DMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLAFESDALDRIAEMNSGDLRSAVN 203
Query: 378 SLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
LQ +++ + EE + RD ++ LF L L +
Sbjct: 204 DLQ------------AIAEGREEITEEDV-------VMGDRDRSVGLFEFLDAVLKEESA 244
Query: 438 TDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIMRQTM 496
D L A+ V + L ++ ++ + AR DFL + + WL +R T
Sbjct: 245 QDALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRVRATQ 299
Query: 497 FYNLLR 502
Y+ R
Sbjct: 300 NYSYWR 305
>gi|238619813|ref|YP_002914639.1| replication factor C large subunit [Sulfolobus islandicus M.16.4]
gi|259585253|sp|C4KHA7.1|RFCL_SULIK RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|238380883|gb|ACR41971.1| AAA ATPase central domain protein [Sulfolobus islandicus M.16.4]
Length = 405
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+PRSL+++ Q +E++ W E L K + +++ G GVGKT +
Sbjct: 4 WFLKYRPRSLKDVENQDGAKKELQEWIESWLNG---KPNAKAVLLHGPPGVGKTTLAEAL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L E + + KL + ++ E+ YGS +
Sbjct: 61 AHDYNLELLEMNASD-----------------SRKLQDIKSVAEKASVYGSIFGT----- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++L+D++ N R + Q +L L+ T P +++T + D + E
Sbjct: 99 -RGKLILLDEVDGINVREDTGAI-QGILELIEKTKYP--IIMT------ANDPWNPALRE 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + V LN + ++R L KIC+ E+ E ++ + S GD R AI
Sbjct: 149 LRN-----KTKMVGLNKLGKYPLRRLLKKICQAEKIICDDEALNYIIDTSEGDARYAINM 203
Query: 379 LQ 380
LQ
Sbjct: 204 LQ 205
>gi|385773315|ref|YP_005645881.1| AAA ATPase [Sulfolobus islandicus HVE10/4]
gi|385775947|ref|YP_005648515.1| AAA ATPase [Sulfolobus islandicus REY15A]
gi|323474695|gb|ADX85301.1| AAA ATPase central domain protein [Sulfolobus islandicus REY15A]
gi|323477429|gb|ADX82667.1| AAA ATPase central domain protein [Sulfolobus islandicus HVE10/4]
Length = 405
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+PRSL+++ Q +E++ W E L K + +++ G GVGKT +
Sbjct: 4 WFLKYRPRSLKDVENQDGAKKELQEWIESWLNG---KPNAKAVLLHGPPGVGKTTLAEAL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L E + + KL + ++ E+ YGS +
Sbjct: 61 AHDYNLELLEMNASD-----------------SRKLQDIKSVAEKASVYGSIFGT----- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++L+D++ N R + Q +L L+ T P +++T + D + E
Sbjct: 99 -RGKLILLDEVDGINVREDTGAI-QGILELIEKTKYP--IIMT------ANDPWNPALRE 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + V LN + ++R L KIC+ E+ E ++ + S GD R AI
Sbjct: 149 LRN-----KTKMVGLNKLGKYPLRRLLKKICQAEKIICDDEALNYIIDTSEGDARYAINM 203
Query: 379 LQ 380
LQ
Sbjct: 204 LQ 205
>gi|336252282|ref|YP_004595389.1| Replication factor C large subunit [Halopiger xanaduensis SH-6]
gi|335336271|gb|AEH35510.1| Replication factor C large subunit [Halopiger xanaduensis SH-6]
Length = 511
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E + D+ + +++ G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLEEWAE-----TWDEHR-DAVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ER+ S S ++ G
Sbjct: 58 AADMG-----W----PV------------MELNASDSRGADVIERVAGEASKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V++ + P +V A F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKNANQPIVLV-------------ANEFYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L +A + ++ SI L ICR+E E ++ +A+++ GD+R A+
Sbjct: 143 MSNSLRNA-CETIEFRDVSKRSIVPVLRDICRREGVEFEEEALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|325968176|ref|YP_004244368.1| ATPase AAA [Vulcanisaeta moutnovskia 768-28]
gi|323707379|gb|ADY00866.1| AAA ATPase central domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 435
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 54/252 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q + + + W K K S +++ G G GKT +
Sbjct: 7 WIEKYRPRKLSEVVNQEEAKKALLDWINSW---EKGKPSRKAVMLVGSPGTGKTTLAYAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + + +TG ERIR+ I G
Sbjct: 64 ANEKGYEVLELNA----------SDVRTG--------------ERIRQI------IGGSM 93
Query: 259 KSSA-------ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
K + I+L D++ N R L ++ L+R + P +++T D
Sbjct: 94 KMGSLFGFRGRIILFDEVDGLNVREDRGGL-AAIVELIRESTWP--IIMTANNPWDP--- 147
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
F EL+ A + L P+ I L +IC E + + L+A+ASGGD
Sbjct: 148 ---KFRELRD-----EAEVIQLKPLRENDILTILRRICNNEGIKCEEDALKLIAEASGGD 199
Query: 372 IRQAITSLQFSS 383
+R AI LQ ++
Sbjct: 200 VRAAINDLQAAA 211
>gi|227830341|ref|YP_002832121.1| replication factor C large subunit [Sulfolobus islandicus L.S.2.15]
gi|229579158|ref|YP_002837556.1| replication factor C large subunit [Sulfolobus islandicus
Y.G.57.14]
gi|284997766|ref|YP_003419533.1| ATPase AAA, central domain protein [Sulfolobus islandicus L.D.8.5]
gi|259585236|sp|C3MQ13.1|RFCL_SULIL RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|259585591|sp|C3NE95.1|RFCL_SULIY RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|227456789|gb|ACP35476.1| AAA ATPase central domain protein [Sulfolobus islandicus L.S.2.15]
gi|228009872|gb|ACP45634.1| AAA ATPase central domain protein [Sulfolobus islandicus Y.G.57.14]
gi|284445661|gb|ADB87163.1| AAA ATPase, central domain protein [Sulfolobus islandicus L.D.8.5]
Length = 405
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+PRSL+++ Q +E++ W E L K + +++ G GVGKT +
Sbjct: 4 WFLKYRPRSLKDVENQDGAKKELQEWIESWLNG---KPNAKAVLLHGPPGVGKTTLAEAL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L E + + KL + + E+ YGS +
Sbjct: 61 AHDYNLELLEMNASD-----------------SRKLQDIKGVAEKASVYGSIFGT----- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++L+D++ N R + Q +L L+ T P +++T + D + E
Sbjct: 99 -RGKLILLDEVDGINVREDTGAI-QGILELIEKTKYP--IIMT------ANDPWNPALRE 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + V LN + ++R L KIC+ E+ E ++ + S GD R AI
Sbjct: 149 LRN-----KTKMVGLNKLGKYPLRRLLKKICQAEKIICDDEALNYIIDTSEGDARYAINM 203
Query: 379 LQ 380
LQ
Sbjct: 204 LQ 205
>gi|223477728|ref|YP_002582170.1| replication factor C large subunit [Thermococcus sp. AM4]
gi|214032954|gb|EEB73782.1| Replication factor C large subunit [Thermococcus sp. AM4]
Length = 498
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q K +E+VRAW E L + K L++ G GVGKT TV +
Sbjct: 5 WVEKYRPRKLSEIVNQEKAIEQVRAWIEAWLHGNPPK--KKALILAGPPGVGKTTTVYAL 62
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + E E+I RY + ++
Sbjct: 63 ANEYGFEVIELNASD------------------------ERTYEKIERYVQAAYTMDILG 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K ++ +D+ A R+ L+ R+ + + +A + E
Sbjct: 99 KRRKLIFLDEADNIEPSGA----REIAKLIDRAK--------------NPIIMSANHYWE 140
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + + A V +T I + L +I ++E ++ E + +A+ + GD+R AI
Sbjct: 141 VPREIRNR-ALIVQYKRLTQRDIIKALVRILKREGKTVPKEILYEIARRANGDLRAAIND 199
Query: 379 LQ 380
LQ
Sbjct: 200 LQ 201
>gi|363751186|ref|XP_003645810.1| hypothetical protein Ecym_3515 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889444|gb|AET38993.1| Hypothetical protein Ecym_3515 [Eremothecium cymbalariae
DBVPG#7215]
Length = 636
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 152/358 (42%), Gaps = 73/358 (20%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
++ S + W EKY P S+ ++A+ +KK+ +VR E L D+ +L++TG
Sbjct: 39 NTGGESFDVMEQWYEKYAPTSVADVAIHKKKLSDVRCSLEAMLSGQCDQ---RMLLLTGP 95
Query: 187 AGVGKTATVRQIASHL-------GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
AG K+ V+ ++ L G + + EY ++ S +D F +
Sbjct: 96 AGCSKSTVVKLLSDELVPKYRACGGLKIRRSLAADSTYIEYDNDITD----VSPMDSFGD 151
Query: 240 FVERIR-RYGSTSPSIPGESKSSAILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHIPTA 297
F+++ R + GS + +++L+++LP V + T + + L +P
Sbjct: 152 FLQQARYKIGS----------NLSVILVEELPNVFHDETRLRYNKFMMQWLHADIPLPPL 201
Query: 298 VV-LTEC-----GKADSVDS---TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI 348
V+ +TEC K S+D+ T F + +L ++ NPI I L I
Sbjct: 202 VLCITECELPSNSKTFSLDTSFVTETIFS--KDVLSHPLLTRIKFNPINATLITTRLKYI 259
Query: 349 --CRQEQYS------LSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPN 400
C + Q++ L + +L A GDIR AI LQF
Sbjct: 260 ANCEKSQFTKMKWKRLGSFIKELA--AGPGDIRSAIYMLQF------------------- 298
Query: 401 FPEEKADGHGGFSIQFGRDETLSLFHALGKFLH-NKRETD--NLVKMDQDAFVVKDKF 455
+ DG+ + R+ +L+ FHA+GK ++ +K +TD + K+ ++ D F
Sbjct: 299 WCYSTGDGN----LLSPRETSLNYFHAIGKVIYGSKDDTDEQTITKLMDTENLISDTF 352
>gi|388581933|gb|EIM22239.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 680
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 79/295 (26%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE--------RLGDS---------- 172
+SS +LW +KY+P +L + +V +W +E + DS
Sbjct: 82 VASSDTRLWTDKYRPHKFTDLMGDDRLNRQVMSWLKEWDQCVFGKKTADSLYKRKRDAEP 141
Query: 173 ---KDKFS-----TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNC 224
+D ++ V++I+G G+GKT IA G R++E + +
Sbjct: 142 FAYRDPYNLGRPQERVMLISGPPGLGKTTLAYVIAKQAGYRVFEVNASDDRSARTVDEKL 201
Query: 225 KTGLE-----YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFE 279
K+ L+ + K+D K ++LID++ G +
Sbjct: 202 KSALDVNPITFDGKID-----------------------KRPTLVLIDEIDGATGEGSGG 238
Query: 280 RLRQCLLLLVRSTHIPTA-------------VVLTECGKADSVDSTAQSFEELQSILVDA 326
+RQ L+ + + H+P ++ C D A S L+ I
Sbjct: 239 FVRQ--LINITNDHVPKKRKNGTTQPRLLLRPIICICN-----DLYAPSLRSLRPI---- 287
Query: 327 GARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
+R V P + S L IC +E+ T+ ++ +A+ASGGDIR + +LQF
Sbjct: 288 -SRIVRYKPPSMLSTVTRLKDICGEEEMYADTKSLNALAEASGGDIRNCLNTLQF 341
>gi|116753783|ref|YP_842901.1| replication factor C large subunit [Methanosaeta thermophila PT]
gi|121693813|sp|A0B6D7.1|RFCL_METTP RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|116665234|gb|ABK14261.1| replication factor C large subunit [Methanosaeta thermophila PT]
Length = 467
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 42/245 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P++L+ + K V E+RAW + K + L++ G GVGKT+ +
Sbjct: 4 WAEKYRPKNLDGILGNAKAVSELRAWA---MAWEKGRPEVKCLILYGPPGVGKTSAALAL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS + +WD +E + ++ I S + G
Sbjct: 61 ASEM-----DWDY----------------IELNASDQRTAEIIKSIAGPASQVSTFSGRR 99
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ + D+L T R +L ++++ P ++ E +
Sbjct: 100 RLVILDEADNLHGTYDRGGA----AAILRVIKNATQPVILIANE-------------YYN 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
++ L DA R V I +I L +ICR E E + +A SGGD+R AI
Sbjct: 143 IEKPLRDA-CRGVQFRSIRAQTIASLLREICRSEGIECEPEAVMHIAAMSGGDLRSAIND 201
Query: 379 LQFSS 383
L+ ++
Sbjct: 202 LEAAA 206
>gi|440302268|gb|ELP94590.1| replication factor C large subunit, putative [Entamoeba invadens
IP1]
Length = 762
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 48/259 (18%)
Query: 122 VNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVL 181
VN D+D +W EKY+P+++E+L + +V + + W E D+ +
Sbjct: 278 VNNDND----------IWTEKYRPQTIEDLVGNKTQVMKFKKWLESWKNVIPDR---QAV 324
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
++ G GVGKT T + +A +G E++ + + +++L
Sbjct: 325 LLAGSPGVGKTTTAKILARVMGYNAVEFNA----------SDVRNKKSVSAEL------- 367
Query: 242 ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLT 301
+++ G S GE+ A++++D++ +G ++ + R + LV+ T+ ++
Sbjct: 368 KKVLLNGQIS---RGETYKPALVIMDEV---DGMSSGD--RGGIAELVQFIKKTTSPIVC 419
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D +D QS LV+ + IT ++ LS I + E +++E+I
Sbjct: 420 ICN--DVMDKKMQS-------LVNV-CETINFVKITPNDLETRLSVILKNENIEVASEKI 469
Query: 362 DLVAQASGGDIRQAITSLQ 380
+ +A+ S GD+R AI LQ
Sbjct: 470 EEIAKKSHGDVRYAINVLQ 488
>gi|345006821|ref|YP_004809674.1| replication factor C large subunit [halophilic archaeon DL31]
gi|344322447|gb|AEN07301.1| Replication factor C large subunit [halophilic archaeon DL31]
Length = 494
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 39/246 (15%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K R FEE G S D T +++ G GVGKT+ +
Sbjct: 4 WTESYRPSTLSEVRGNNK----ARDAFEE-WGRSWDDH-TEAVILYGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W+ N D E F R R + S GE
Sbjct: 58 AADMG-------------WETVELNASD----QRTADAIERFAGRAARNATLGGSASGEV 100
Query: 259 KSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
L+I D N ++R Q + LV+ + P ++ E F
Sbjct: 101 GGGRQLVIVD-EADNIHGNYDRGGAQAVTNLVKEANQPIVLIANE-------------FY 146
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
E+ L +A + + ++ SI L ICR+E ++ ++ +A A+ GD+R A+
Sbjct: 147 EMSRGLRNA-CQDIEFRDVSARSIVPVLRDICRKEGIEFESDALERIADANSGDLRGAVK 205
Query: 378 SLQFSS 383
LQ ++
Sbjct: 206 DLQATA 211
>gi|374630528|ref|ZP_09702913.1| replication factor C large subunit [Methanoplanus limicola DSM
2279]
gi|373908641|gb|EHQ36745.1| replication factor C large subunit [Methanoplanus limicola DSM
2279]
Length = 497
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 132/307 (42%), Gaps = 66/307 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P++L+++ R V ++ W K + L++ G+ G+GKT+ +
Sbjct: 4 WVEKYRPKTLKDIVGNRSAVRQMVEWAR------KWESGKEPLLLYGKPGIGKTSAAYAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + EW+ LE + ++ +E++ +T+ S+ G
Sbjct: 58 ANDM-----EWEM----------------LELNASDQRTKSIIEKVAGSCATTMSLSGAE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC-GKADSVDSTAQSFE 317
+ +LL D+ +G +A + + +L +++ + P ++ + G A +
Sbjct: 97 RK--LLLFDEADNLHG-SADKGGARAILDIIKISKQPIILIANDSYGIA----------K 143
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
EL+S+ +V +T +I L IC E S + +A+ SGGD+R A+
Sbjct: 144 ELKSV-----CEQVQFRALTAKTISDHLRDICSLEDLKCSESTLAEIAEGSGGDMRSALN 198
Query: 378 SLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
L +SL +D + ++S + +DE S+F +G L + RE
Sbjct: 199 KLYAASLGEDTLREAAVSTA-------------------SKDERASIFDLVGSVLKS-RE 238
Query: 438 TDNLVKM 444
L+++
Sbjct: 239 DQRLMQL 245
>gi|227827645|ref|YP_002829425.1| replication factor C large subunit [Sulfolobus islandicus M.14.25]
gi|229584849|ref|YP_002843351.1| replication factor C large subunit [Sulfolobus islandicus M.16.27]
gi|259585252|sp|C3N5N1.1|RFCL_SULIA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|259585254|sp|C3MVD2.1|RFCL_SULIM RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|227459441|gb|ACP38127.1| AAA ATPase central domain protein [Sulfolobus islandicus M.14.25]
gi|228019899|gb|ACP55306.1| AAA ATPase central domain protein [Sulfolobus islandicus M.16.27]
Length = 405
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+PRSL+++ Q +E++ W E L K + +++ G GVGKT +
Sbjct: 4 WFLKYRPRSLKDVENQDGAKKELQEWIESWLNG---KPNAKAVLLHGPPGVGKTTLAEAL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L E + + KL + ++ E+ YGS +
Sbjct: 61 AHDYNLELLEMNASD-----------------SRKLQDIKSVAEKASVYGSIFGT----- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++L+D++ N R + Q +L L+ T P +++T + D + E
Sbjct: 99 -RGKLILLDEVDGINVREDTGAI-QGILELIEKTKYP--LIMT------ANDPWNPALRE 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + V LN + ++R L KIC+ E+ E ++ + S GD R AI
Sbjct: 149 LRN-----KTKMVGLNKLGKYPLRRLLKKICQAEKIICDDEALNYIIDTSEGDARYAINM 203
Query: 379 LQ 380
LQ
Sbjct: 204 LQ 205
>gi|448604825|ref|ZP_21657870.1| replication factor C large subunit [Haloferax sulfurifontis ATCC
BAA-897]
gi|445743146|gb|ELZ94629.1| replication factor C large subunit [Haloferax sulfurifontis ATCC
BAA-897]
Length = 486
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 151/366 (41%), Gaps = 66/366 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W E D ++ +V+ G G+GKT+ +
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEW-AETWDDHRE-----AVVVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W+T + + +TG D E F R + + + S G S
Sbjct: 58 AADMG-----WETV-----ELNASDQRTG-------DVIERFAGRAAKNATLAGSSTGTS 100
Query: 259 KSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++++D+ +G ++R + LV+S+ P ++ E F
Sbjct: 101 -TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE-------------FY 144
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++ L +A +++ ++ SI L ICR+E ++ +D +A+ + GD+R A+
Sbjct: 145 DMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLRSAVN 203
Query: 378 SLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
LQ +++ + EE + RD ++ LF L L +
Sbjct: 204 DLQ------------AIAEGREKITEEDV-------VMGDRDRSVGLFEFLDAVLKEESA 244
Query: 438 TDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIMRQTM 496
D L A+ V + L ++ ++ + AR DFL + + WL +R T
Sbjct: 245 QDALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRVRATQ 299
Query: 497 FYNLLR 502
Y+ R
Sbjct: 300 NYSYWR 305
>gi|342185694|emb|CCC95179.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 589
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 130/297 (43%), Gaps = 61/297 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
WAEKYKPR++ ++ ++R W EE + G+S+ T ++++G GVGKT +V
Sbjct: 14 WAEKYKPRTIAQMCYP-TYANKLRLWVEEFQAGNSR----TRGVLLSGPPGVGKTTSVYV 68
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI--RRYGSTSPSIP 255
+A+ LG + E++ ++ S+ EN + R + +TS S
Sbjct: 69 VAAELGLAVIEYNAS----------------DFRSRKSLRENVSSIVNNRTFSNTSSSY- 111
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
+ A+LL+D++ + E ++ ++++T IP ++ C ++
Sbjct: 112 ----ADALLLMDEVDGCDTGGVGE-----VIQMIKNTTIP---IVCTCNDRWNM------ 153
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+L+S+L +V P N K+ +E SLS + + + Q SG DIR
Sbjct: 154 --KLRSLLNHVEDIRVG-RPPCNIVANYLCDKVLAREGISLSKQLLQDIIQRSGSDIRSM 210
Query: 376 ITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFL 432
+ +LQ + + +L L+ ++Q +D + LF A FL
Sbjct: 211 LNNLQMWCINETTLLQKKLA---------------ECALQSAKDSDVGLFEAAEIFL 252
>gi|154301785|ref|XP_001551304.1| hypothetical protein BC1G_10044 [Botryotinia fuckeliana B05.10]
Length = 1054
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 41/268 (15%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLV 182
++ QLW KY P + ++ + +VE+++AW F++R D + ++
Sbjct: 459 TSSQLWTTKYAPTQMNQICGNKGQVEKIQAWLKGWETAHKYNFQKRGADGLGGY--RAII 516
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
I G G+GKT A+HL A+L +D I + + ++ + L E N
Sbjct: 517 IHGPPGIGKTT-----AAHLAAKLAGYD-----ILERNASDVRSKKLVETGLSEVLNNTS 566
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
+ + + ++K +L++D++ +G ++ +R L + ++T IP ++
Sbjct: 567 VLGYFAGDGKDV-DKTKKKLVLIMDEV---DGMSSGDRGGVGALAKICKTTDIPMILI-- 620
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D + + D R+ ++ ++ ++ IC +E L + I
Sbjct: 621 -CN-----DRKLPKMKPFDFVTFDMPFRRPTVD-----MVRSRIATICHREGMKLPVQVI 669
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPM 389
D + + S DIRQ I + L Q M
Sbjct: 670 DALIEGSNKDIRQIINMISTVKLDQTAM 697
>gi|322368972|ref|ZP_08043539.1| replication factor C large subunit [Haladaptatus paucihalophilus
DX253]
gi|320551703|gb|EFW93350.1| replication factor C large subunit [Haladaptatus paucihalophilus
DX253]
Length = 488
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 46/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFE--ERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
W EKY+P +L E+ K ++++ W + E GD+ +++ G GVGKT+
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDKLKQWADTWEDHGDA--------VILHGSPGVGKTSAAH 55
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A+ +G W PTI + + +TG + V+R+ + S ++ G
Sbjct: 56 ALANDMG-----W----PTI-ELNASDQRTG-----------DVVKRVAGEAAKSGTLTG 94
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ ++++D+ A + + +V+S + P ++ E F
Sbjct: 95 GTAGRRVVIMDEADNLT-HNADRGGSRAITDVVKSANQPLILIANE-------------F 140
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
++ + L +A + ++ SI L ICRQE +E ++ +A+ GD+R A+
Sbjct: 141 YDMSNSLRNA-CETIEFRNVSARSIVPALRDICRQENIEYESEALEAIAENDSGDLRSAV 199
Query: 377 TSLQ 380
LQ
Sbjct: 200 NDLQ 203
>gi|119571674|gb|EAW51289.1| RAD17 homolog (S. pombe), isoform CRA_g [Homo sapiens]
Length = 490
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 40/290 (13%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 13 YQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 71
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC 349
R P ++++ D+ Q + I + ++ NP+ + + L++I
Sbjct: 72 RIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIV 127
Query: 350 RQEQYSLSTE-------QIDLVAQASGGDIRQAITSLQFS---------------SLKQD 387
E + ++L+ Q GDIR AI SLQFS SLK D
Sbjct: 128 TIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSD 187
Query: 388 PMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMD 445
+L+ S KP+ F ++ G G+D +L LF ALGK L+ KR + L ++D
Sbjct: 188 AVLSKSKRRKKPDRVFENQEVQAIG------GKDVSLFLFRALGKILYCKRAS--LTELD 239
Query: 446 QDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
++ R L ++ PE+V+ +H +LH+N ++D +
Sbjct: 240 SPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFNLYLHQN-YIDFFME 287
>gi|410672033|ref|YP_006924404.1| replication factor C large subunit [Methanolobus psychrophilus R15]
gi|409171161|gb|AFV25036.1| replication factor C large subunit [Methanolobus psychrophilus R15]
Length = 497
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 48/255 (18%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGK 191
+ Q WAEKY+PR+L ++ +K + E+R W GDS + +V +++ GQAG+GK
Sbjct: 2 TMQMEWAEKYRPRTLADVVGHKKSIGELRKW-----GDSWAHGAPDVKAVILHGQAGIGK 56
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T++ +A+ Y+W+ +E + + +E++ S
Sbjct: 57 TSSAHAMAAD-----YDWEV----------------IELNASDQRTASVIEKVAGSASQM 95
Query: 252 PSIPGESKSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
++ G S I+L D+L T+ R + ++ ++++T P ++ A+ +
Sbjct: 96 RTLTGMSGKRLIILDEADNLHGTSDRGGA----RAIIDVIKNTSQPIILI------ANDI 145
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
+ S L ++ I S+ L +I R E ++ +A+ +
Sbjct: 146 YGISSSVRAL--------CLEIKFPAIQARSMIPALKEIARNEGLMCGIGALEKIAENAD 197
Query: 370 GDIRQAITSLQFSSL 384
GD R A+ LQ +++
Sbjct: 198 GDFRSAVNDLQAAAI 212
>gi|310794495|gb|EFQ29956.1| replication factor RFC1 C terminal domain-containing protein
[Glomerella graminicola M1.001]
Length = 1026
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P L + + +VE+++AW F+ R D T ++I+G
Sbjct: 449 QLWTSKYAPTQLNHICGNKAQVEKIQAWLKNWQKARKYDFQRRGADGMG--GTRAIIISG 506
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT A+HL A+L +D + + + ++ + + + N +
Sbjct: 507 PPGIGKT-----TAAHLAAKLAGFD-----VIESNASDTRSKKLVENGVSDVMNNTSLLG 556
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
+ + GE K + +L++D++ +G +A +R L + T IP +V E
Sbjct: 557 FFAGDGKKVDGE-KKNIVLIMDEV---DGMSAGDRGGVGALAKFCKKTEIPLILVCNE-- 610
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
+ + +D R+ + ++ + IC +E L +D +
Sbjct: 611 ------RKLPKMKPFDFVAMDVPFRRPTVE-----QVRSRIMTICHREGLKLPVPVVDAL 659
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM 389
+ S DIRQ I + + L Q M
Sbjct: 660 IEGSNKDIRQIINMISTAKLDQASM 684
>gi|347828480|emb|CCD44177.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1069
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 41/268 (15%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLV 182
++ QLW KY P + ++ + +VE+++AW F++R D + ++
Sbjct: 474 TSSQLWTTKYAPTQMNQICGNKGQVEKIQAWLKGWETAHKYNFQKRGADGLGGY--RAII 531
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
I G G+GKT A+HL A+L +D I + + ++ + L E N
Sbjct: 532 IHGPPGIGKTT-----AAHLAAKLAGYD-----ILERNASDVRSKKLVETGLSEVLNNTS 581
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
+ + + ++K +L++D++ +G ++ +R L + ++T IP ++
Sbjct: 582 VLGYFAGDGKDV-DKTKKKLVLIMDEV---DGMSSGDRGGVGALAKICKTTDIPMILI-- 635
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D + + D R+ ++ ++ ++ IC +E L + I
Sbjct: 636 -CN-----DRKLPKMKPFDFVTFDMPFRRPTVD-----MVRSRIATICHREGMKLPVQVI 684
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPM 389
D + + S DIRQ I + L Q M
Sbjct: 685 DALIEGSNKDIRQIINMISTVKLDQTAM 712
>gi|307596341|ref|YP_003902658.1| AAA ATPase [Vulcanisaeta distributa DSM 14429]
gi|307551542|gb|ADN51607.1| AAA ATPase central domain protein [Vulcanisaeta distributa DSM
14429]
Length = 435
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 48/249 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q + + + W + K K S +++ G G GKT +
Sbjct: 7 WVEKYRPRRLSEVVNQEEAKKALLDWINDW---EKGKPSKKAVMLVGPPGTGKTTLAYAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY--GSTSPSIPG 256
A+ G + E + + +TG ERIR+ GS
Sbjct: 64 ANERGYEVLELNA----------SDVRTG--------------ERIRQVMGGSMKMGSLF 99
Query: 257 ESKSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K IL +D L V R ++ L+R + P +++T D
Sbjct: 100 GFKGRIILFDEVDGLNVREDRGGL----AAIVELIRESTWP--IIMTANNPWDP------ 147
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
F EL+ A + L P+ I L +IC E + + L+A++SGGD+R
Sbjct: 148 KFRELRD-----EAEVIQLKPLDEDDILTILRRICNAEGIKCEEDALKLIAESSGGDVRA 202
Query: 375 AITSLQFSS 383
AI LQ ++
Sbjct: 203 AINDLQAAA 211
>gi|448362195|ref|ZP_21550807.1| replication factor C large subunit [Natrialba asiatica DSM 12278]
gi|445649065|gb|ELZ02009.1| replication factor C large subunit [Natrialba asiatica DSM 12278]
Length = 511
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W D +D +++ G GVGKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNNKARDKLEEWAT-TWDDHRD-----TVIVHGSPGVGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ERI + S ++ G
Sbjct: 57 ATDMG-----W----PV------------MELNASDSRGADVIERIAGEAAKSGTLTGGE 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+S + P +V E F +
Sbjct: 96 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKSANQPIVLVANE-------------FYD 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E + + +A+A+ GD+R A+
Sbjct: 142 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREDIEFDEDALKKIAEATSGDLRSAVND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|313215753|emb|CBY16330.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 142/355 (40%), Gaps = 64/355 (18%)
Query: 148 LEELAVQRKKVEEVRAWFEERLGDSK--DKFSTNVLVITGQAGVGKTATVRQIASHLGAR 205
++ELA +KK +EVR+W +G S S VL+++G G GK V+ +
Sbjct: 96 VKELACTKKKADEVRSWI---IGASTVGSAASQKVLLVSGPNGCGKFTAVKSVCHEERID 152
Query: 206 LYEWD-TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAIL 264
+ E+ + + +E + + + +F F+ + + S S +L
Sbjct: 153 IQEYVCAESSSTEEENIFDVSYNVFRDPSARDFMAFIYQRTLFRSES--------RKQLL 204
Query: 265 LIDDLPVTNGRTA--FERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSI 322
+I +LP + FE++ + L + HIPT V +T + + +F +Q +
Sbjct: 205 IIKELPFSLAENPLEFEKIAKTL----QKAHIPT-VFITNTPRL--YPNLLVTFRHVQFL 257
Query: 323 LVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFS 382
V A A K L G K SLST+ I + +A+ GD+RQAI + F+
Sbjct: 258 KVAATAMKKVL-----GKYK------------SLSTKDIKDIVEAADGDVRQAINMVHFN 300
Query: 383 SLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKR-ETDNL 441
S K G + G D L LF ALG+ L++KR +T
Sbjct: 301 S--------------------RKVSGTTKVTCAQG-DSKLLLFRALGRILYSKRLDTREP 339
Query: 442 VKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQTM 496
K F + R L+ PE + Q FLHEN I + M
Sbjct: 340 SKFRN--FSLDPVHQRRELQYPEPEAQCLNSGFQPSTFSQFLHENLPRCIPERNM 392
>gi|88602285|ref|YP_502463.1| replication factor C small subunit [Methanospirillum hungatei JF-1]
gi|110287812|sp|Q2FQT9.1|RFCS_METHJ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|88187747|gb|ABD40744.1| replication factor C small subunit [Methanospirillum hungatei JF-1]
Length = 323
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 54/279 (19%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T +W EKY+PR LE++ Q++ +E +R++ +R L+ TG AG GKT
Sbjct: 4 THAIWIEKYRPRVLEDIIGQQEIIERLRSYVAKR--------EMPHLLFTGNAGTGKTTA 55
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
A L + D WQ E +D N +I+++ TSP
Sbjct: 56 ----AVALAREFFGED------WQMNFRELNASDE--RGIDVVRN---QIKQFARTSPF- 99
Query: 255 PGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
+ IL +D D T+ ++A R + T+ T + C + +
Sbjct: 100 --GGSTFKILFLDEADALTTDAQSALRRTME--------TYAQTCRFILSC------NYS 143
Query: 313 AQSFEELQSILVDAGARKVAL---NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
A+ + +QS + A+ P+ ++ + +I + +++ E ID + +
Sbjct: 144 AKIIDPIQS--------RCAIYRFRPLGRQAVSEMVKRISADQNLTVTEEVIDAIFYVAQ 195
Query: 370 GDIRQAITSLQFSS-LKQDPMLNLSLSISKPNFPEEKAD 407
GD+R+AI +LQ ++ L +D ++ +I+ PEE D
Sbjct: 196 GDMRKAINALQGAAILGRDISPDMIFAITATARPEEIDD 234
>gi|42559517|sp|Q975D4.2|RFCL_SULTO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|342306207|dbj|BAK54296.1| replication factor C large subunit [Sulfolobus tokodaii str. 7]
Length = 440
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P++L E+ + +E+ W E L K K + +++ G GVGKT +
Sbjct: 5 WFLKYRPKTLNEVENEEDAKKELVEWIESWL---KGKPNYKAVLLYGPPGVGKTTLAEAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L+E + + L++ ER S + +I G
Sbjct: 62 ARDYKLELFEMNASD-----------------SRNLNDIRTMAER----ASITGTIFG-- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++L+D++ N R + +L L+ T P ++LT + D S
Sbjct: 99 IKGKLILLDEVDGLNARADAGAI-DAILELINKTKYP--IILT------ANDPWDPSLRP 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + + L +T +KR L KIC E+ + E +D + + S GD R AI
Sbjct: 150 LRN-----AVKMIELKRLTKYPLKRILKKICEAEKITCEDEALDFIIEQSEGDARYAINM 204
Query: 379 LQ 380
LQ
Sbjct: 205 LQ 206
>gi|19718788|ref|NP_579918.1| cell cycle checkpoint protein RAD17 isoform 3 [Homo sapiens]
gi|4050042|gb|AAC97950.1| RAD17 isoform 3 [Homo sapiens]
gi|119571667|gb|EAW51282.1| RAD17 homolog (S. pombe), isoform CRA_d [Homo sapiens]
Length = 505
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 40/290 (13%)
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV 289
Y S++ F+ F+ R +Y I+L++DLP R + L + L V
Sbjct: 13 YQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS-HTLHEVLRKYV 71
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC 349
R P ++++ D+ Q + I + ++ NP+ + + L++I
Sbjct: 72 RIGRCPLIFIISDSLSGDN----NQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIV 127
Query: 350 RQEQYSLSTE-------QIDLVAQASGGDIRQAITSLQFS---------------SLKQD 387
E + ++L+ Q GDIR AI SLQFS SLK D
Sbjct: 128 TIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLKSD 187
Query: 388 PMLNLSLSISKPN--FPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMD 445
+L+ S KP+ F ++ G G+D +L LF ALGK L+ KR + L ++D
Sbjct: 188 AVLSKSKRRKKPDRVFENQEVQAIG------GKDVSLFLFRALGKILYCKRAS--LTELD 239
Query: 446 QDAFVVK-DKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
++ R L ++ PE+V+ +H +LH+N ++D +
Sbjct: 240 SPRLPSHLSEYERDTLLVE-PEEVVEMSHMPGDLFNLYLHQN-YIDFFME 287
>gi|448350301|ref|ZP_21539120.1| replication factor C large subunit [Natrialba taiwanensis DSM
12281]
gi|445637808|gb|ELY90956.1| replication factor C large subunit [Natrialba taiwanensis DSM
12281]
Length = 512
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W D +D +++ G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDKLEEWAT-TWDDHRD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ERI + S ++ G
Sbjct: 58 ANDMG-----W----PV------------MELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+S + P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKSANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E ++ +A+ + GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREDIEYEEEALEKIAETTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|118384400|ref|XP_001025348.1| ATPase, AAA family protein [Tetrahymena thermophila]
gi|89307115|gb|EAS05103.1| ATPase, AAA family protein [Tetrahymena thermophila SB210]
Length = 1242
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 45/264 (17%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF----------EERLGDSKDKFSTNVLV 182
+S LW KY P+ L + +++++ W ++ G+ K+ + +
Sbjct: 636 NSIHSLWTHKYAPQELNDCVGNEAQIKKLENWLVNWENVVVHKQKVQGNWKENPGSRACL 695
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
I+G G+GKT+TVR +A + EW+ + + + L+ + L NF
Sbjct: 696 ISGPPGIGKTSTVRLLAQKYNMNIIEWNA-SDVRNKNAIETIINPLKDNTVL----NFKH 750
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHIPTAVVLT 301
+ S +I+L+D++ +++G Q L+ +++ T P V
Sbjct: 751 EV-------------SSQRSIILMDEVDGMSSGDIGG---NQALMKIIKETKNPIFCV-- 792
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D +Q L SI D V G I + L ++CR+E +
Sbjct: 793 -CN-----DRYSQKLRSLASICFD-----VRFYKPNKGQIAKRLLEVCRKEGLKSELNHL 841
Query: 362 DLVAQASGGDIRQAITSLQFSSLK 385
+ +A++ DIRQA+ LQ S K
Sbjct: 842 EFLAESVNNDIRQALNLLQMQSKK 865
>gi|240278892|gb|EER42398.1| cell cycle checkpoint protein rad17 [Ajellomyces capsulatus H143]
Length = 967
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 143/353 (40%), Gaps = 92/353 (26%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAE+Y P +L+EL VLV+ G AG GK+ T+ +
Sbjct: 304 WAEEYAPTNLDEL--------------------------VRVLVLRGPAGSGKSTTISLL 337
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS-------TS 251
++ +G + EW +P + E+ Y S +FE+F+ R ++GS
Sbjct: 338 SNTIGFEIVEWKSP---LGSEFSSQG-----YVSMGAQFEDFLGRSDKFGSLFLSGGGRE 389
Query: 252 PS-----------IPGESKSSAILLIDDLP-----VTNGRTAFE-RLRQCLLL------- 287
PS I ++ ++L+++ P ++G AF LR L+
Sbjct: 390 PSQSATHGNADHLIASTTEKRRVILVEEFPSSLNQSSSGLRAFRLALRSYLVTATPRQPF 449
Query: 288 ---LVRSTHI---PTAVVLTECGKA-DSVDSTAQSFEEL--QSILVDAGARKVALNPITN 338
+R T+I P ++++E + S + + L I + N +
Sbjct: 450 DNQFIRDTNISSPPLIMIVSETMLGWGGISSDSFTVHRLLGPEISSHPSVSIIDFNRVAP 509
Query: 339 GSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSL 394
+ + + + ++E +++ L A A GDIR AI++L+F L+ + N S
Sbjct: 510 TFMAKAIDLVLKKEARRSKRKRVPGPEVLKAFAQMGDIRSAISALEFMCLRGEEDTNWSG 569
Query: 395 SISKPNFPEEKADGHGGFSIQ----------FGRDETLSLFHALGKFLHNKRE 437
+++ K GG + R+ +L +FHA+GK ++NKRE
Sbjct: 570 TVAG----RMKRPSKGGIPLTSMEKESLEMVTQREASLGIFHAVGKVVYNKRE 618
>gi|57642154|ref|YP_184632.1| replication factor C large subunit [Thermococcus kodakarensis KOD1]
gi|62287361|sp|Q5JHP1.1|RFCL_PYRKO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|57160478|dbj|BAD86408.1| replication factor C, large subunit [Thermococcus kodakarensis
KOD1]
Length = 499
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 45/246 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T+ W EKY+PR L E+ Q K +E+VRAW E L + K L++ G GVGKT T
Sbjct: 2 TEVPWVEKYRPRKLSEIVNQEKALEQVRAWVEAWLHGNPPK--KKALLLAGPPGVGKTTT 59
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
V +A+ G + E + E E+I RY + ++
Sbjct: 60 VYALANEYGFEVIELNASD------------------------ERTYEKIERYVQAAYTM 95
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K ++ +D+ N + R L+ R+ I +A E + + + AQ
Sbjct: 96 DILGKRRKLIFLDE--ADNIEPSGAREIAKLIDKARNPIIMSANHYWEVPR--EIRNKAQ 151
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +T I + L +I ++E + E + +A+ + GD+R
Sbjct: 152 IVE---------------YKRLTQRDIIKALVRILKREGLEVPKEVLYEIAKRANGDLRA 196
Query: 375 AITSLQ 380
A+ LQ
Sbjct: 197 AVNDLQ 202
>gi|325090150|gb|EGC43460.1| cell cycle control protein [Ajellomyces capsulatus H88]
Length = 967
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 143/353 (40%), Gaps = 92/353 (26%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAE+Y P +L+EL VLV+ G AG GK+ T+ +
Sbjct: 304 WAEEYAPTNLDEL--------------------------VRVLVLRGPAGSGKSTTISLL 337
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS-------TS 251
++ +G + EW +P + E+ Y S +FE+F+ R ++GS
Sbjct: 338 SNTIGFEIVEWKSP---LGSEFSSQG-----YVSMGAQFEDFLGRSDKFGSLFLSGGGRE 389
Query: 252 PS-----------IPGESKSSAILLIDDLP-----VTNGRTAFE-RLRQCLLL------- 287
PS I ++ ++L+++ P ++G AF LR L+
Sbjct: 390 PSQSATHGNADHLIASTTEKRRVILVEEFPSSLNQSSSGLRAFRLALRSYLVTATPRQPF 449
Query: 288 ---LVRSTHI---PTAVVLTECGKA-DSVDSTAQSFEEL--QSILVDAGARKVALNPITN 338
+R T+I P ++++E + S + + L I + N +
Sbjct: 450 DNQFIRDTNISSPPLIMIVSETMLGWGGISSDSFTVHRLLGPEISSHPSVSIIDFNRVAP 509
Query: 339 GSIKRTLSKICRQEQYSLSTEQID----LVAQASGGDIRQAITSLQFSSLKQDPMLNLSL 394
+ + + + ++E +++ L A A GDIR AI++L+F L+ + N S
Sbjct: 510 TFMAKAIDLVLKKEARRSKRKRVPGPEVLKAFAQMGDIRSAISALEFMCLRGEEDTNWSG 569
Query: 395 SISKPNFPEEKADGHGGFSIQ----------FGRDETLSLFHALGKFLHNKRE 437
+++ K GG + R+ +L +FHA+GK ++NKRE
Sbjct: 570 TVAG----RMKRPSKGGIPLTSMEKESLEMVTQREASLGIFHAVGKVVYNKRE 618
>gi|448399879|ref|ZP_21571112.1| replication factor C large subunit [Haloterrigena limicola JCM
13563]
gi|445668332|gb|ELZ20962.1| replication factor C large subunit [Haloterrigena limicola JCM
13563]
Length = 493
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K ++++ W E + D +V+V G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLKEWAE-----TWDDHRQSVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ERI + S ++ G
Sbjct: 58 AADMG-----W----PV------------MELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V++ + P +V E F +
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSRE-VTRVVKNANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E + +A+++ GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREDIEFEEEALAKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|448082489|ref|XP_004195152.1| Piso0_005697 [Millerozyma farinosa CBS 7064]
gi|359376574|emb|CCE87156.1| Piso0_005697 [Millerozyma farinosa CBS 7064]
Length = 629
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 55/317 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
Q W + Y+P S +++ + +K++EVR + + + D T +L+++G AG K+ V+
Sbjct: 51 QQWIQTYQPNSAKDVCINPQKLKEVRNILDHMINGATD---TKLLILSGPAGCSKSTLVK 107
Query: 197 QIASHLGAR----LYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF-VERIRRYGSTS 251
+A+ L R + + T Y + +E T + + F F ++ R GS
Sbjct: 108 VLANELIQRKSPARFMFGASTYEKGNSYTEYSEQSIEGTGQSNHFSEFLMDSKYRTGS-- 165
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTAVVLTEC---GKA 306
+ +++LI++LP + RQ L+ L T P V LTE G+
Sbjct: 166 --------NLSLILIEELPNIYNLSTLLNFRQSLMEWLCTSETLPPLVVCLTEVELQGEN 217
Query: 307 DSVD----STAQSFEEL--QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS--- 357
D + + E L + IL + V P+ + +K+TL+ I +E+ +
Sbjct: 218 KYKDYFSIENSLTVETLFGKDILNRHQVKVVRFKPLASTFMKKTLNNIINRERKIFAPIP 277
Query: 358 --TEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ 415
+ Q L S GDIR AI +L+ I + K+ + +
Sbjct: 278 KKSVQEYLEGIISTGDIRSAICNLE---------------IWARQYKYTKS------TDE 316
Query: 416 FGRDETLSLFHALGKFL 432
R+ L FHA+GK +
Sbjct: 317 MYREVRLDFFHAIGKII 333
>gi|429193387|ref|YP_007179065.1| AAA ATPase [Natronobacterium gregoryi SP2]
gi|429137605|gb|AFZ74616.1| AAA ATPase [Natronobacterium gregoryi SP2]
Length = 535
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 111/273 (40%), Gaps = 47/273 (17%)
Query: 113 LTPSRFEGLVNPD----HDSASAS-SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE 167
+ P F+G P H +A + S W EKY+P +L E+ K ++++ W
Sbjct: 15 INPGHFDGRCIPHITYRHFNAYINLGSKMSDWTEKYRPTTLSEVRGNNKARDKLQEW--- 71
Query: 168 RLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTG 227
D+ D+ + +++ G G+GKT+ +A+ +G W
Sbjct: 72 --ADTWDEHR-DAVIVHGSPGIGKTSAAHALANDMG-----WPV---------------- 107
Query: 228 LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL 287
+E + + +ER+ + S ++ G ++++D+ +G + R+ +
Sbjct: 108 MELNASDSRGADVIERVAGEAAKSGTLTGGGAGRRLVILDEADNFHGNADYGGSRE-VTR 166
Query: 288 LVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSK 347
+V+ P +V E F E+ L +A + ++ SI L
Sbjct: 167 VVKEADQPVVLVANE-------------FYEMSQSLRNA-CEAIEFRDVSKRSIVPVLRD 212
Query: 348 ICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQ 380
ICR+E E + +A+ + GD+R A+ LQ
Sbjct: 213 ICRREGIEFEEEALKQIAEETSGDLRSAVNDLQ 245
>gi|448353083|ref|ZP_21541861.1| replication factor C large subunit [Natrialba hulunbeirensis JCM
10989]
gi|445641150|gb|ELY94233.1| replication factor C large subunit [Natrialba hulunbeirensis JCM
10989]
Length = 514
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K ++++ W E D +D +++ G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDKLKEWAE-TWDDHRD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ LG W P +E + + +ER+ + S ++ G
Sbjct: 58 ANDLG-----W----PV------------MELNASDSRGADVIERVAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+S + P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKSANQPMVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L A + ++ SI L ICR+E E + +A+ + GD+R A+
Sbjct: 143 MSQSLRSA-CETIEFRDVSKRSIVPVLRDICRREDIEFEDEALQKIAEDTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|355571069|ref|ZP_09042339.1| Replication factor C large subunit [Methanolinea tarda NOBI-1]
gi|354826351|gb|EHF10567.1| Replication factor C large subunit [Methanolinea tarda NOBI-1]
Length = 468
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 74/314 (23%)
Query: 139 WAEKYKPRSLEEL----AVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
WAEKY+P L+E+ A+ + ++ R W D+ K L++ G+ G GKT +
Sbjct: 3 WAEKYRPAHLDEIVGNTAILHQMLDWARGW------DAGKK----PLILYGKPGTGKTTS 52
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+AS +G W+ +E + +E++ GST+ S
Sbjct: 53 AHALASDMG-------------WE--------AIELNASDQRTRAVIEKVAGSGSTTASF 91
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G+ + +++ID+ +G TA + +L L+R P ++ +
Sbjct: 92 SGKRR---LVIIDEADNLHG-TADRGGARAILELLRVARQPVILIANDLYAVPG--EIRN 145
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E LQ I SI L IC E+ + S + +A++SGGD+R
Sbjct: 146 RCEALQ------------FRAIQARSIVPRLRFICSAEKIACSENALKKIAESSGGDMRA 193
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
AI LQ ++ +D L+ +SIS +D ++F +G L+
Sbjct: 194 AIHMLQAAAAGRD-RLDEDISIS-------------------AKDTRSTIFDVIGA-LYG 232
Query: 435 KRETDNLVKMDQDA 448
+ + ++L+++ DA
Sbjct: 233 RTDPESLLRLAYDA 246
>gi|448583744|ref|ZP_21646967.1| replication factor C large subunit [Haloferax gibbonsii ATCC 33959]
gi|445729097|gb|ELZ80696.1| replication factor C large subunit [Haloferax gibbonsii ATCC 33959]
Length = 487
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 149/370 (40%), Gaps = 74/370 (20%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E + W + R +V+ G G+GKT+
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAKTWDDHR----------EAVVVHGSPGIGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ +G W+T + +TG D E F R + + + S
Sbjct: 54 AHALAADMG-----WETVELN-----ASDQRTG-------DVIERFAGRAAKNATLAGSS 96
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G S + ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 AGTS-TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE----------- 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F ++ L +A +++ ++ SI L ICR+E + ++ +D +A+ + GD+R
Sbjct: 143 --FYDMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLAFESDALDRIAEMNSGDLR 199
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 200 SAVNDLQ------------AIAEGREEITEEDV-------VMGDRDRSVGLFEFLDAVLK 240
Query: 434 NKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIM 492
K + L A+ V + L ++ ++ + AR DFL + + WL +
Sbjct: 241 EKSAQEALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRV 295
Query: 493 RQTMFYNLLR 502
R T Y+ R
Sbjct: 296 RATQNYSYWR 305
>gi|448569391|ref|ZP_21638651.1| replication factor C large subunit [Haloferax lucentense DSM 14919]
gi|448600161|ref|ZP_21655874.1| replication factor C large subunit [Haloferax alexandrinus JCM
10717]
gi|445724524|gb|ELZ76156.1| replication factor C large subunit [Haloferax lucentense DSM 14919]
gi|445735571|gb|ELZ87120.1| replication factor C large subunit [Haloferax alexandrinus JCM
10717]
Length = 486
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 148/370 (40%), Gaps = 74/370 (20%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E + W + R +V+ G G+GKT+
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAKTWDDHR----------EAVVVHGSPGIGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ +G W+T + +TG D E F R + + + S
Sbjct: 54 AHALAADMG-----WETVELN-----ASDQRTG-------DVIERFAGRAAKNATLAGSS 96
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G S + ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 AGTS-TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE----------- 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F ++ L +A +++ ++ SI L ICR+E ++ +D +A+ + GD+R
Sbjct: 143 --FYDMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLR 199
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 200 SAVNDLQ------------AIAEGREKITEEDV-------VMGDRDRSVGLFEFLDAVLK 240
Query: 434 NKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIM 492
+ D L A+ V + L ++ ++ + AR DFL + + WL +
Sbjct: 241 EESAQDALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRV 295
Query: 493 RQTMFYNLLR 502
R T Y+ R
Sbjct: 296 RATQNYSYWR 305
>gi|289580410|ref|YP_003478876.1| ATPase AAA [Natrialba magadii ATCC 43099]
gi|448284079|ref|ZP_21475344.1| replication factor C large subunit [Natrialba magadii ATCC 43099]
gi|289529963|gb|ADD04314.1| AAA ATPase central domain protein [Natrialba magadii ATCC 43099]
gi|445572174|gb|ELY26716.1| replication factor C large subunit [Natrialba magadii ATCC 43099]
Length = 514
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K ++++ W E D +D +++ G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDKLKEWAE-TWDDHQD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ LG W P +E + + +ERI + S ++ G
Sbjct: 58 ANDLG-----W----PV------------MELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+S + P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKSANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E + + +A+ + GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREDIEFEDDALQKIAEDTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|340058742|emb|CCC53103.1| putative replication factor C, subunit 1 [Trypanosoma vivax Y486]
Length = 582
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 57/304 (18%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAG 188
S ++S WAEKYKPR++ ++ +++ W EE G SK + + +++G G
Sbjct: 2 STTASVPSQWAEKYKPRTIAQMCYP-ATANKLKLWVEEFDAGTSKMRGA----LLSGPPG 56
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
VGKT +V +A+ LG + E++ + L E + V R +
Sbjct: 57 VGKTTSVYVVAAELGRVVVEYNA--------------SDFRSRKSLREHVSDVVNNRTFN 102
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
+TS S S+ ILL+D++ + E ++ ++++T +P ++ C
Sbjct: 103 NTSTSY-----SNIILLMDEVDGCDIGGVGE-----VIQMIKTTTVP---IVCTCND--- 146
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+ +L+S+L +V+ P N KI +E SLS + + V Q S
Sbjct: 147 -----RWHTKLRSLLNHVEDIRVS-RPPCNIVANYICDKILAREGVSLSKQLLQDVIQRS 200
Query: 369 GGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHAL 428
G DIR + +LQ L ++ + E KA ++Q +D + LF A
Sbjct: 201 GSDIRSMLNNLQMWCLGRNTL-------------EPKA--LAACALQSAKDGDVGLFEAA 245
Query: 429 GKFL 432
FL
Sbjct: 246 EVFL 249
>gi|433425430|ref|ZP_20406706.1| replication factor C large subunit [Haloferax sp. BAB2207]
gi|432197824|gb|ELK54179.1| replication factor C large subunit [Haloferax sp. BAB2207]
Length = 488
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 148/370 (40%), Gaps = 74/370 (20%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E + W + R +V+ G G+GKT+
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAKTWDDHR----------EAVVVHGSPGIGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ +G W+T + +TG D E F R + + + S
Sbjct: 54 AHALAADMG-----WETVELN-----ASDQRTG-------DVIERFAGRAAKNATLAGSS 96
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G S + ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 AGTS-TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE----------- 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F ++ L +A +++ ++ SI L ICR+E ++ +D +A+ + GD+R
Sbjct: 143 --FYDMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLR 199
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 200 SAVNDLQ------------AIAEGREKITEEDV-------VMGDRDRSVGLFEFLDAVLK 240
Query: 434 NKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIM 492
+ D L A+ V + L ++ ++ + AR DFL + + WL +
Sbjct: 241 EESAQDALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRV 295
Query: 493 RQTMFYNLLR 502
R T Y+ R
Sbjct: 296 RATQNYSYWR 305
>gi|448609953|ref|ZP_21660803.1| replication factor C large subunit [Haloferax mucosum ATCC
BAA-1512]
gi|445745312|gb|ELZ96779.1| replication factor C large subunit [Haloferax mucosum ATCC
BAA-1512]
Length = 484
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 145/365 (39%), Gaps = 64/365 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P SL E+ K + + W +S D V V+ G G+GKT+ +
Sbjct: 4 WTEKYRPSSLSEVRGNNKARDALAEW-----ANSWDDHREAV-VVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS +G W+T + + +TG D E F R + + S S G S
Sbjct: 58 ASDMG-----WETV-----ELNASDQRTG-------DVIERFAGRAAKNATLSGSSTGTS 100
Query: 259 KSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++++D+ +G ++R + LV+S+ P ++ E F
Sbjct: 101 -TRQLVILDEADNIHGN--YDRGGSSAVTRLVKSSSQPIVLIANE-------------FY 144
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++ L +A +++ ++ SI L ICR+E + ++ +A + GD+R A+
Sbjct: 145 DMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFEPDALERIADMNSGDLRSAVN 203
Query: 378 SLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRE 437
LQ +++ + EE I RD ++ LF L L +
Sbjct: 204 DLQ------------AIAEGRDEITEEDV-------IMGDRDRSVGLFEFLDAVLKEESA 244
Query: 438 TDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQTMF 497
D L A+ V + L ++ ++ + AR + + WL +R T
Sbjct: 245 QDALYT----AYDVDETPDDLTKWIEDKVSLVYEPDELARAYEFLANADRWLGRVRATQN 300
Query: 498 YNLLR 502
Y+ R
Sbjct: 301 YSYWR 305
>gi|15897671|ref|NP_342276.1| replication factor C large subunit [Sulfolobus solfataricus P2]
gi|284174996|ref|ZP_06388965.1| replication factor C large subunit [Sulfolobus solfataricus 98/2]
gi|384434285|ref|YP_005643643.1| AAA ATPase [Sulfolobus solfataricus 98/2]
gi|42559540|sp|Q9UXF6.1|RFCL_SULSO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=SsoRFC large subunit
gi|6015707|emb|CAB57534.1| replication factor C, large subunit [Sulfolobus solfataricus P2]
gi|13813942|gb|AAK41066.1| Activator 1, replication factor C (RFC) large subunit (rfcL)
[Sulfolobus solfataricus P2]
gi|261602439|gb|ACX92042.1| AAA ATPase central domain protein [Sulfolobus solfataricus 98/2]
Length = 405
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W KY+PRSL+++ Q ++++ W E L G+S + +++ G GVGKT
Sbjct: 4 WFLKYRPRSLKDVENQDDAKKQLQEWIESWLNGNS----NVKAVLLHGPPGVGKTVLAEA 59
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A L E + + KL + ++ E+ YGS +
Sbjct: 60 LAHDYNFELLEMNASD-----------------SRKLQDIKSIAEKAAVYGSIFGT---- 98
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++L+D++ N R + Q +L L+ T P +++T + D
Sbjct: 99 --KGKLILLDEVDGINVREDTGAI-QGILELIEKTKYP--IIMT------ANDPWNPGLR 147
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
EL++ A+ + L+ + ++R L KIC+ E+ E ++ + +S GD R AI
Sbjct: 148 ELRN-----KAKMIELSKLGKYPLRRILKKICQAEKIICDDEALNYIIDSSEGDARYAIN 202
Query: 378 SLQ 380
LQ
Sbjct: 203 ILQ 205
>gi|88602207|ref|YP_502385.1| replication factor C large subunit [Methanospirillum hungatei JF-1]
gi|110287809|sp|Q2FQR4.1|RFCL_METHJ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|88187669|gb|ABD40666.1| replication factor C large subunit [Methanospirillum hungatei JF-1]
Length = 483
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 113/259 (43%), Gaps = 44/259 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+PR L E+ R+ + ++ W ++ + L++ G+ G+GKT++ +
Sbjct: 3 WAEKYRPRHLNEMVGNREALHQMSEWA------TRWTVESPPLILYGKPGIGKTSSAWAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A + W+ +E + + +E++ +++ S+ G +
Sbjct: 57 AHDM-----NWEV----------------VELNASDQRTKAVIEKVAGGSASTGSLTGAA 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++++D+ G R + ++R P ++ + +D T ++
Sbjct: 96 RK--LIILDEADNLQGNADRGGAR-AIAEVIRQARQPLILIANDLY---GLDGTIRNL-- 147
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
KV + S+ L +IC +EQ + S + + +A+ SGGDIR A+T
Sbjct: 148 ---------CTKVQFKALPAKSLVPRLREICSREQLTCSAQALTDIAEQSGGDIRSAVTM 198
Query: 379 LQFSSLKQDPMLNLSLSIS 397
L S++ +D + +SIS
Sbjct: 199 LYASAIGKDTVGEDDVSIS 217
>gi|383319999|ref|YP_005380840.1| replication factor C large subunit [Methanocella conradii HZ254]
gi|379321369|gb|AFD00322.1| replication factor C large subunit [Methanocella conradii HZ254]
Length = 533
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 123/286 (43%), Gaps = 46/286 (16%)
Query: 119 EGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST 178
EG V ++ + + WAEKY+P SL ++ V+ ++ W E DS
Sbjct: 10 EGYVRRMSEAEEGMAQNHEDWAEKYRPVSLNDIVGNEAAVKALKKWAENF--DS----GK 63
Query: 179 NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
+++ G GVGKT+ +A +G WD +E + +
Sbjct: 64 RAVILYGGPGVGKTSAALALAHDMG-----WDY----------------IEMNASDQRTK 102
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTA 297
+ + ++ S + + G ++ +L++D+ +G ++R + ++ +++S+ P
Sbjct: 103 DAINKVAGSASRTGTFGG-ARERRLLILDEADNLHG--TYDRGGESAMISVIKSSGQPIV 159
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
++ A + L L D A + PI + SI + L +IC +E+
Sbjct: 160 LI-------------ANDYYALSKQLRDI-AEPIQFRPILSSSIVKVLKRICTEERIRCE 205
Query: 358 TEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
E + +A+ + D+R AI LQ +++ +D + ++ + + PE
Sbjct: 206 PEALMKIAERT-HDLRSAINDLQAAAIGRDEVTLADVTTGERDVPE 250
>gi|305663892|ref|YP_003860180.1| AAA ATPase [Ignisphaera aggregans DSM 17230]
gi|304378461|gb|ADM28300.1| AAA ATPase central domain protein [Ignisphaera aggregans DSM 17230]
Length = 480
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 48/245 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P++L ++ Q + +V W ++ L++ G G GKT+ V I
Sbjct: 10 WIIKYRPKTLSDIVNQDEAKNKVLEWLKKW-----PNVQRKALLLYGPPGCGKTSLVEAI 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ L E + ++ + D +ERI S+ SI G
Sbjct: 65 ANEFKYELIEMNAS----------------DFRRRSD-----IERIAIRASSMQSIFG-- 101
Query: 259 KSSAILLIDDLPVTNGRT---AFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
K+ I+L+D++ + + E ++Q LV T +P V++T D S
Sbjct: 102 KTRKIILLDEVDGISAKEDEGGIEAIKQ----LVEKTSVP--VIMTANNPYDP------S 149
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
L+ I A V ++ ++ L+KICR E E ID + + + GD+R A
Sbjct: 150 LRVLREI-----AEMVQFKKLSKSDMRMVLNKICRAENLRCDEEAIDYIIERAEGDLRAA 204
Query: 376 ITSLQ 380
I LQ
Sbjct: 205 INDLQ 209
>gi|292656553|ref|YP_003536450.1| replication factor C large subunit [Haloferax volcanii DS2]
gi|448290554|ref|ZP_21481702.1| replication factor C large subunit [Haloferax volcanii DS2]
gi|291372005|gb|ADE04232.1| replication factor C large subunit [Haloferax volcanii DS2]
gi|445578464|gb|ELY32869.1| replication factor C large subunit [Haloferax volcanii DS2]
Length = 488
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 148/370 (40%), Gaps = 74/370 (20%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E + W + R +V+ G G+GKT+
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAKTWDDHR----------EAVVVHGSPGIGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ +G W+T + +TG D E F R + + + S
Sbjct: 54 AHALAADMG-----WETVELN-----ASDQRTG-------DVIERFAGRAAKNATLAGSS 96
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G S + ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 AGTS-TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE----------- 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F ++ L +A +++ ++ SI L ICR+E ++ +D +A+ + GD+R
Sbjct: 143 --FYDMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLR 199
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 200 SAVNDLQ------------AIAEGREKITEEDV-------VMGDRDRSVGLFEFLDAVLK 240
Query: 434 NKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIM 492
+ D L A+ V + L ++ ++ + AR DFL + + WL +
Sbjct: 241 EESAQDALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRV 295
Query: 493 RQTMFYNLLR 502
R T Y+ R
Sbjct: 296 RATQNYSYWR 305
>gi|448705304|ref|ZP_21700804.1| replication factor C large subunit [Halobiforma nitratireducens JCM
10879]
gi|445795705|gb|EMA46228.1| replication factor C large subunit [Halobiforma nitratireducens JCM
10879]
Length = 517
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 100/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K ++++ W E D +D +++ G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLKEWAE-TWDDHRD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G + +E + + + +ERI S + ++
Sbjct: 58 ANDMGWPM---------------------MELNASDNRQADVIERIAGEASKTGTLTAGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ ++ +T P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVVKNATQ-PVVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E + ++ +A+ + GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRKEGVEFEDDALEKIAEDTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|448565679|ref|ZP_21636546.1| replication factor C large subunit [Haloferax prahovense DSM 18310]
gi|445715423|gb|ELZ67179.1| replication factor C large subunit [Haloferax prahovense DSM 18310]
Length = 487
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 148/370 (40%), Gaps = 74/370 (20%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E + W + R +V+ G G+GKT+
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAKTWDDHR----------EAVVVHGSPGIGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ +G W+T + +TG D E F R + + + S
Sbjct: 54 AHALAADMG-----WETVELN-----ASDQRTG-------DVIERFAGRAAKNATLAGSS 96
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G S + ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 AGTS-TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE----------- 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F ++ L +A +++ ++ SI L ICR+E ++ +D +A+ + GD+R
Sbjct: 143 --FYDMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLR 199
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 200 SAVNDLQ------------AIAEGREKITEEDV-------VMGDRDRSVGLFEFLDAVLK 240
Query: 434 NKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIM 492
K + L A+ V + L ++ ++ + AR DFL + + WL +
Sbjct: 241 EKSAQEALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRV 295
Query: 493 RQTMFYNLLR 502
R T Y+ R
Sbjct: 296 RATQNYSYWR 305
>gi|448305471|ref|ZP_21495401.1| replication factor C large subunit [Natronorubrum sulfidifaciens
JCM 14089]
gi|445588241|gb|ELY42485.1| replication factor C large subunit [Natronorubrum sulfidifaciens
JCM 14089]
Length = 494
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 50/246 (20%)
Query: 139 WAEKYKPRSLEELAVQ---RKKVEE-VRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ R ++EE R W + R +++ G GVGKT+
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLEEWARTWDDHR----------EAVIVHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ LG W +E + + + +ERI + S ++
Sbjct: 54 AHALANDLG-------------W--------PAMELNASDNRQADVIERIAGEAAKSGTL 92
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++++D+ +G + R+ + +V++ + P +V E
Sbjct: 93 TAGGAGRRLVILDEADNFHGNADYGGSRE-VTRVVKNANQPIVLVANE------------ 139
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
F ++ L +A V ++ SI L ICR+E E + +A A+ GD+R
Sbjct: 140 -FYDMSQSLRNA-CETVEFRDVSKRSIVPVLRDICRREGIEFEAEALKKIADATSGDLRS 197
Query: 375 AITSLQ 380
A+ LQ
Sbjct: 198 AVNDLQ 203
>gi|340975788|gb|EGS22903.1| replication factor C subunit-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 1041
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 57/273 (20%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P L ++ ++ VE++++W F++R D + ++I+G
Sbjct: 447 QLWTTKYAPTQLNQICGNKQNVEKIQSWLRNWPKARKWNFQKRGADGMGGY--RAIIISG 504
Query: 186 QAGVGKTATVRQIASHLGARLYEW--------DTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
G+GKT A+HL A+L + DT + +E + + L TS L F
Sbjct: 505 PPGIGKTT-----AAHLAAKLEGYDVIESNASDTRNKKLVEEGVTDI---LNNTSLLGYF 556
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPT 296
+++ +K +L++D++ +G +A +R L L R T +P
Sbjct: 557 AGDGKKV-----------DATKKRIVLIMDEV---DGMSAGDRGGVGALAKLCRKTEVPM 602
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ D + + D ++ ++ I+ + IC +E +
Sbjct: 603 ILICN--------DRRLPKMKPFDHVAFDIKFQRPTVD-----QIRSRMMTICHREGLKM 649
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
S ++ + + SG DIRQ I L + L Q M
Sbjct: 650 SPPVLNALIEGSGKDIRQIINMLATAKLDQTTM 682
>gi|429962047|gb|ELA41591.1| hypothetical protein VICG_01339 [Vittaforma corneae ATCC 50505]
Length = 552
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 51/257 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P ++EE+ + +E++R + + + +++G GVGKT V +
Sbjct: 109 WAEKYRPATVEEIVGNKTAIEQLRLFIQ-------NGTEYKAALLSGPPGVGKTTAVLAV 161
Query: 199 ASHLGARLYEW---DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
G E+ D + + E + NC + L +
Sbjct: 162 CREQGITPIEFNASDLRSKKMLAETISNCTSNLSISKDW--------------------- 200
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
S S +++++D++ +G T+ + L+ +++ T +P V+ C D T Q
Sbjct: 201 --SVSKSVIVMDEV---DGMTSDKGGIPELVSIIKKTKVP---VICICN-----DKTHQK 247
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
L S +D RK L+P T I + + +E +L I+ + S GDIR
Sbjct: 248 MRTLSSYCLDIRFRK--LDPRT---IMPRIKIVLEKEGKTLPEGAINEIIMNSNGDIRYI 302
Query: 376 ITSLQFSSLKQDPMLNL 392
+ ++Q SL P+LNL
Sbjct: 303 LNTIQ--SLVMKPVLNL 317
>gi|448324332|ref|ZP_21513763.1| replication factor C large subunit [Natronobacterium gregoryi SP2]
gi|445619015|gb|ELY72562.1| replication factor C large subunit [Natronobacterium gregoryi SP2]
Length = 493
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K ++++ W D+ D+ + +++ G G+GKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDKLQEW-----ADTWDEHR-DAVIVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ER+ + S ++ G
Sbjct: 58 ANDMG-----W----PV------------MELNASDSRGADVIERVAGEAAKSGTLTGGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ P +V E F E
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSRE-VTRVVKEADQPVVLVANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E + +A+ + GD+R A+
Sbjct: 143 MSQSLRNA-CEAIEFRDVSKRSIVPVLRDICRREGIEFEEEALKQIAEETSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|448623358|ref|ZP_21669901.1| replication factor C large subunit [Haloferax denitrificans ATCC
35960]
gi|445752760|gb|EMA04182.1| replication factor C large subunit [Haloferax denitrificans ATCC
35960]
Length = 489
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 148/370 (40%), Gaps = 74/370 (20%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E + W + R +V+ G G+GKT+
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAKTWDDHR----------EAVVVHGSPGIGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ +G W+T + +TG D E F R + + + S
Sbjct: 54 AHALAADMG-----WETVELN-----ASDQRTG-------DVIERFAGRAAKNATLAGSS 96
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G S + ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 TGTS-TRQLVILDEADNIHGN--YDRGGASAVTRLVKSSSQPIVLIANE----------- 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F ++ L +A +++ ++ SI L ICR+E ++ +D +A+ + GD+R
Sbjct: 143 --FYDMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLR 199
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 200 SAVNDLQ------------AVAEGREKITEEDV-------VMGDRDRSVGLFEFLDAVLK 240
Query: 434 NKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFL-HENCWLDIM 492
+ D L A+ V + L ++ ++ + AR DFL + + WL +
Sbjct: 241 EESAQDALYT----AYDVDETPDDLTKWVEDKVSLVYEPDELAR-AYDFLANADRWLGRV 295
Query: 493 RQTMFYNLLR 502
R T Y+ R
Sbjct: 296 RATQNYSYWR 305
>gi|448739048|ref|ZP_21721068.1| replication factor C large subunit [Halococcus thailandensis JCM
13552]
gi|445800862|gb|EMA51210.1| replication factor C large subunit [Halococcus thailandensis JCM
13552]
Length = 491
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W E + D+ +V+ G GVGKT+ +
Sbjct: 3 WTEKYRPSTLSEVRGNNKARDALAEWAE-----TWDEHR-EAVVLHGAPGVGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + +W PTI E + ++ VER+ + S ++ G S
Sbjct: 57 AADM-----DW----PTI------------ELNASNQRTKSVVERVAGEAAKSGTLTGGS 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E F +
Sbjct: 96 AGRRLVIMDEADNLHGNVDRGGSR-AITGLVKEASQPMVLIANE-------------FYD 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E+ E +D +A+ + GD+R A+
Sbjct: 142 MSKSLRNA-CETIEFRDVSARSILPVLRDICRREEVEYDDEALDAIAERNSGDLRGAVND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|238881576|gb|EEQ45214.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 498
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 142/334 (42%), Gaps = 79/334 (23%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
P S + ++ QQ W +KY+P++ E+ + K+++V+ + + + + T VLV+
Sbjct: 42 PVKKSQTTINNNQQ-WIDKYRPKTTSEICINPTKLKQVKESMMKMINKTSN---TRVLVL 97
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
+G +G K+ TV+ +A L +D+ +EY DE E+F++
Sbjct: 98 SGPSGSSKSTTVKLLAEELITVRDAFDS--------------VVVEY----DESEDFLKF 139
Query: 244 IR--RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV----RSTHIPTA 297
++ RY KS ++L+++LP ++ R + + +P
Sbjct: 140 LQDCRY-----------KSKNVILVEELPNIYHLETLKKFRDAIRDWIYQDDNGFSLPPL 188
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVD----------AGARKVALNPITNGSIKRTLSK 347
++ + DS D S+ ++ VD + N I N +K T++K
Sbjct: 189 IICLSEIEYDSNDLRI-SYSIENNLTVDTLLGKEITGLTQVENIKFNSIANRFLKPTINK 247
Query: 348 ICRQEQY-SLSTEQI-----DLVAQASGGDIRQAITSLQ--FSSLKQDPMLNLSLSISKP 399
I +QE + +QI D + Q GDIR I +L+ ++KQ +S+
Sbjct: 248 IIKQEGILKIVNQQILMRFLDEIFQI--GDIRSIIFNLEMWIKNVKQSLTNRISID---- 301
Query: 400 NFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
F R+ +++LFHA+GK ++
Sbjct: 302 ---------------SFMRENSINLFHAIGKIIY 320
>gi|341883312|gb|EGT39247.1| CBN-RFC-1 protein [Caenorhabditis brenneri]
Length = 842
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 47/267 (17%)
Query: 139 WAEKYKPRSLEELAVQR-------KKVEEVRAWFEERLGD--------------SKDKFS 177
W +KYKP+ L EL Q K ++ +R W + LG+ S+D
Sbjct: 278 WVDKYKPKRLGELVGQHGEKSPMNKLMDWLRDWAKHNLGEGAKIKKPKPAPWMASQDGTP 337
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
+++G GVGKT LG +L E + + + +K+ E
Sbjct: 338 FKAALLSGSPGVGKTTCAYMACQQLGLKLVEMNA----------SDVRNKKHLEAKIGEL 387
Query: 238 ENFVERIRRYGSTSPSIP-GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
+I + S+P +SK +L++D++ +G + + L+ +++ + IP
Sbjct: 388 TG-SHQIEEFFGVKKSVPQDDSKVHHVLIMDEVDGMSGNQDRAGISE-LIQIIKESKIP- 444
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ C D L + D K + +I+ + IC QE+ +
Sbjct: 445 --IICICN-----DRMHPKIRSLANYCYDLRFSKPRVE-----TIRSRMMTICSQEKVKI 492
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSS 383
S E++D + + SG D+RQ I +LQ S
Sbjct: 493 SKEELDELIELSGHDVRQTIYNLQMRS 519
>gi|448317665|ref|ZP_21507213.1| replication factor C large subunit [Natronococcus jeotgali DSM
18795]
gi|445602591|gb|ELY56565.1| replication factor C large subunit [Natronococcus jeotgali DSM
18795]
Length = 486
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K +++R W E D K +++ G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDQLREWAE--TWDDHRK----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + D P +E + + +ER+ S S ++
Sbjct: 58 ANDM-------DWPV--------------MELNASDSRGADVIERVAGEASKSGTLTAGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+S + P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKSANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L DA + ++ SI L ICR+E E ++ +A+ + GD+R A+
Sbjct: 143 MSQSLRDA-CETIEFRDVSKRSIVPVLRDICRREGVEFEEEALEKIAEDTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|389847870|ref|YP_006350109.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
gi|448617850|ref|ZP_21666310.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
gi|388245176|gb|AFK20122.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
gi|445748218|gb|ELZ99668.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
Length = 485
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 49/256 (19%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P SL E+ K E ++W + R +V+ G G+GKT+
Sbjct: 4 WTEKYRPSSLSEVRGNNKARDALAEWAKSWDDHR----------EAVVVYGSPGIGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+AS +G W+T + + +TG D E F R + + S S
Sbjct: 54 AHALASDMG-----WETV-----ELNASDQRTG-------DVIERFAGRAAKNATLSGSS 96
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G S + ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 TGTS-TRQLVILDEADNIHGN--YDRGGSSAVTKLVKSSSQPIVLIANE----------- 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
F ++ L +A +++ ++ SI L ICR+E ++ + +A + GD+R
Sbjct: 143 --FYDMSRGLRNA-CQEIEFRDVSARSIVPVLRDICRKEGLEFESDALQAIADMNSGDLR 199
Query: 374 QAITSLQFSSLKQDPM 389
A+ LQ + +D +
Sbjct: 200 SAVNDLQAIAEGRDKI 215
>gi|145483719|ref|XP_001427882.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394965|emb|CAK60484.1| unnamed protein product [Paramecium tetraurelia]
Length = 929
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 55/261 (21%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSK----------DKFSTNVLVITGQ 186
QLW KY P + + + + V + W + + G + F+ L+++G
Sbjct: 382 QLWTNKYAPSKVSD-CLDQTHVPNIVKWLD-KWGKPQLEICPGSFQSQNFAAKALLLSGP 439
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR- 245
G+GKT +R IA +L EW+ + SKL + EN+V+ ++
Sbjct: 440 PGIGKTTIIRLIAKQKSYQLIEWNAS----------------DVRSKL-QIENYVKHLQD 482
Query: 246 ----RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER-LRQCLLLLVRSTHIPTAVVL 300
R+ + G++ I+L+D++ +G T +R +CL+ ++R T +P +
Sbjct: 483 NTVLRFKDANLISEGKT----IILMDEV---DGMTGSDRGGNKCLIDMIRLTKVPIVCI- 534
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
C D QS L + +D +K I + L IC+ E S +
Sbjct: 535 --CN-----DRNKQSMRSLANYCLDLQFKKP-----NQVEIFKKLEYICKSENISYDPAE 582
Query: 361 IDLVAQASGGDIRQAITSLQF 381
+ + S DIRQ + LQ
Sbjct: 583 LKQQIEVSQCDIRQLLNLLQM 603
>gi|324502655|gb|ADY41166.1| Replication factor C subunit 1 [Ascaris suum]
Length = 1002
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 45/267 (16%)
Query: 139 WAEKYKPRSLEELAVQR-------KKVEEVRAWFEERLGDS--------------KDKFS 177
W +KYKP SL++L Q K + +R W + LGD+ D S
Sbjct: 431 WVDKYKPTSLKQLVGQNGDKSPMNKLLGWLRDWPKYHLGDAAKQKRPRPPPWMAQSDGTS 490
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
++++G G+GKT LG + E + + ++++ + L ++DE+
Sbjct: 491 FKAILLSGPPGIGKTTCALMACKELGLQFVEMNA-SDARNKKFLESKVAELIGCHQIDEY 549
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTA 297
+G S + + +L++D++ +G L + L+ ++R T IP
Sbjct: 550 ---------FGGKSRKVAKADELGHVLIMDEVDGMSGNEDRAGLSE-LIQMIRETRIPII 599
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
+ D + L + D ++ + I+ + I QE+ LS
Sbjct: 600 CICN--------DRQSPKMRSLVNYCFDVRFQRPRVE-----QIRSRMQTIAFQEKLKLS 646
Query: 358 TEQIDLVAQASGGDIRQAITSLQFSSL 384
EQID V +AS D+RQ I +LQ S+
Sbjct: 647 KEQIDEVIEASNHDVRQTIYNLQLLSM 673
>gi|448087068|ref|XP_004196245.1| Piso0_005697 [Millerozyma farinosa CBS 7064]
gi|359377667|emb|CCE86050.1| Piso0_005697 [Millerozyma farinosa CBS 7064]
Length = 629
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 151/360 (41%), Gaps = 61/360 (16%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
+ DS + +S Q W + Y+P S++++ + +K++EVR ++ + K T +L+++
Sbjct: 42 EQDSETKNS---QQWIQTYQPNSVKDVCINPQKLKEVRNILDQMM---KGVTETKLLILS 95
Query: 185 GQAGVGKTATVRQIASHLGAR----LYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
G AG K+ V+ +A+ L R + + T T Y + +E T + + F F
Sbjct: 96 GPAGCSKSTLVKVLANELIQRKSPARFMFGTSTNERGNSYTEYSEQSIEGTGQSNHFSEF 155
Query: 241 -VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTA 297
++ R GS + +++LI++LP + R+ L+ L T P
Sbjct: 156 LMDSKYRTGS----------NLSLILIEELPNIYNLSTLLNFRKSLMEWLCASETLPPLV 205
Query: 298 VVLTEC---GKADSVD----STAQSFEEL--QSILVDAGARKVALNPITNGSIKRTLSKI 348
V L+E G+ D + + E L + IL + V P+ + +K+TL+ I
Sbjct: 206 VCLSEVELQGENKYQDYFSIENSLTVETLFGKDILNRKQVKVVRCKPLASTFMKKTLNNI 265
Query: 349 CRQEQYSLSTEQIDLVAQ-----ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPE 403
+E+ ++ V + S GDIR AI +L+ +
Sbjct: 266 INRERKIFASIPKKPVQEYLEDIISTGDIRSAICNLEIWA-------------------- 305
Query: 404 EKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK---DKFSRLPL 460
+ + + + R+ L FHA+GK + + D + D VK D +PL
Sbjct: 306 -RQYKYTKSTDEMYREVRLDFFHAIGKIIFSSSNFDTKDTNEIDCLSVKEVQDHNDNVPL 364
>gi|311977779|ref|YP_003986899.1| putative replication factor C small subunit [Acanthamoeba polyphaga
mimivirus]
gi|82050826|sp|Q5UQ47.1|RFCS1_MIMIV RecName: Full=Putative replication factor C small subunit R395;
Short=RFC small subunit R395; AltName: Full=Clamp loader
small subunit R395
gi|55417014|gb|AAV50664.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308204801|gb|ADO18602.1| putative replication factor C small subunit [Acanthamoeba polyphaga
mimivirus]
gi|339061329|gb|AEJ34633.1| hypothetical protein MIMI_R395 [Acanthamoeba polyphaga mimivirus]
Length = 319
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 59/274 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV-LVITGQAGVGKTATVRQ 197
W EKY+P +++++ + +++ + ++R NV L+ITG GVGKT+TVR
Sbjct: 7 WIEKYRPVNIDDVIIDDNISKQINIFLQDR---------ENVHLIITGSPGVGKTSTVRC 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
IA L + Q Y LE + D R S S IP
Sbjct: 58 IAKELLGE---------DMSQGY-------LEINAAED---------RGVRSISTIIPPF 92
Query: 258 SK------SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
K S I+L+D+ + + ++ + +++ T + T +
Sbjct: 93 CKKVFAANKSKIILLDEADIMTSKCQYD-----INNMIKKFGRKTKFIFT-------CND 140
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+++ E++QSI R + +T+ I + LSKIC E+ + + + S GD
Sbjct: 141 SSKIIEDIQSI-----CRILRFKKLTDEQINQYLSKICVNEKIPYDEQGLRTICYISNGD 195
Query: 372 IRQAITSLQFSSLKQDPML-NLSLSISKPNFPEE 404
+R++I LQ ++ + + NL L I K PE+
Sbjct: 196 MRKSINDLQKTAFTFEKITKNLVLKICKVPDPED 229
>gi|254567664|ref|XP_002490942.1| Checkpoint protein, involved in the activation of the DNA damage
and meiotic pachytene checkpoints [Komagataella pastoris
GS115]
gi|238030739|emb|CAY68662.1| Checkpoint protein, involved in the activation of the DNA damage
and meiotic pachytene checkpoints [Komagataella pastoris
GS115]
Length = 425
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 123/304 (40%), Gaps = 60/304 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY PR +E +AV +K+++V++ + L + ++ + G G GK+ R +
Sbjct: 25 WIEKYAPRKIESIAVNPQKIKQVQSALSQCL-----QGLIKIIFLVGPTGTGKSTVARAV 79
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL--DEFENFVERIRRYGSTSPSIPG 256
+ L ++ + + L+Y S + F F++ I
Sbjct: 80 SRLLLNEVFGKNEGLDRV-----------LDYESGKGSEHFAKFLQECL--------ILT 120
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTAVVLTECGKADSVDSTAQ 314
+K++ +++DDLP + E+ LL L R P + ++E + + + +
Sbjct: 121 HTKTAKSIIVDDLPNLSNDVTREKTSSALLRWLDYRGLTPPLIICVSENSQGEEANQYVE 180
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ Q +L + ++ N +T +++ L I R E + DL + +S GDI
Sbjct: 181 KMFDKQ-VLNHSKVVRINFNKVTQKILEKVLKNILRNE----GAQCKDLQSFSSMGDISS 235
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
AI + E+ HG + +D+ + LF A+GK L+
Sbjct: 236 AINGM------------------------EQNVKHGFSDV---KDDDIGLFDAIGKVLYG 268
Query: 435 KRET 438
R +
Sbjct: 269 SRNS 272
>gi|440297420|gb|ELP90114.1| cell cycle checkpoint protein rad17, putative [Entamoeba invadens
IP1]
Length = 432
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 119/297 (40%), Gaps = 77/297 (25%)
Query: 148 LEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLY 207
L+ L V +KKV EVRAW L S ++L++TG G GKT V+ IAS L
Sbjct: 14 LDSLVVNQKKVAEVRAWMATHLK------SASILILTGPPGCGKTTLVKTIASVDSIVLK 67
Query: 208 EWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE---NFVERIRRY---GSTSPSIPGESKSS 261
E + T T +L++ + + +E++RR+ S S+ G
Sbjct: 68 EVEDHT-----------------TFRLEDDKKPLDTIEKLRRWILCSSQMFSLFGGDWRR 110
Query: 262 AILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD-----SVDSTAQSF 316
+I+L ++ +T+ + + VRS IP V E K + D + F
Sbjct: 111 SIVLYEEGGITDW------FVEVFVDYVRSAKIPLIVTGNESMKNNINKLLDTDPLNEDF 164
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+ V ++LN I SIK+ L + E +D + ++ GD+R A+
Sbjct: 165 -----VSVKQSITYISLNAIPPTSIKKCLKGVV--------PEMVDTIVESCNGDLRVAL 211
Query: 377 TSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
+ Q + + F+ ++E ++ FH +G+ +H
Sbjct: 212 NTKQIVATNK------------------------TFAKVVAKNEAVNFFHLIGRIIH 244
>gi|268531838|ref|XP_002631047.1| C. briggsae CBR-HPR-17 protein [Caenorhabditis briggsae]
Length = 509
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 147/361 (40%), Gaps = 53/361 (14%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
+ L ++ P+ E+L + KK+ EV W + ++ VL +TG G GK+ V
Sbjct: 6 EDLLTTEFAPKRREDLHIHNKKIGEVSNWIKAAFA--QENRHQPVLYLTGPTGSGKSTAV 63
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK-LDEFENFVERIRRYGSTSPSI 254
+ H L ++ +P + + L+Y L + NF+ IRR+ S
Sbjct: 64 EVLCMHHNVELIDY---SPELLYD------DHLQYEKHDLSQLTNFL--IRRHASLK--- 109
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE---CGKADSVDS 311
+ S +L + +LP R LL + P LT C +
Sbjct: 110 --KGSSKIVLFVSELPDQAYLDPIT-FRNELLSALYGLRHPVIFCLTNDIACWTLNPDRL 166
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+ +++ +D + N + +K+ L + Q LS ++ ++A+ S GD
Sbjct: 167 LTNDY--IRTNYIDT----ITFNAVAVTFLKKALDRASNLLQTPLSNSKLLIIAEESRGD 220
Query: 372 IRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKF 431
+R A+ LQ +S+ ++P + K KA+ R+E FH +G+
Sbjct: 221 LRAAMNMLQMNSVGKNP----NRRTGKDVICASKAN----------REEA---FHMIGRI 263
Query: 432 LHNKRETDN------LVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHE 485
L+ KR N + + + V + R L+ + P +++ ++ + +++FL E
Sbjct: 264 LYAKRVNPNAPVISRITNKKRKSVPVPEPTERTDLEHN-PSDIITMSNMPSDKLIEFLFE 322
Query: 486 N 486
N
Sbjct: 323 N 323
>gi|435848165|ref|YP_007310415.1| AAA ATPase [Natronococcus occultus SP4]
gi|433674433|gb|AGB38625.1| AAA ATPase [Natronococcus occultus SP4]
Length = 495
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K +++ W E S D V+V G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDQLEEWAE-----SWDDHRKAVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ER+ S S ++
Sbjct: 58 ANDMG-----W----PV------------MELNASDSRGADVIERVAGEASKSGTLTAGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ P ++ E F E
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKDASQPMVLIANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L DA + ++ SI L ICR+E E ++ +A+++ GD+R A+
Sbjct: 143 MSQSLRDA-CETIEFRDVSKRSIVPVLRDICRREDVEFEEEALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|429857953|gb|ELA32790.1| chromosome transmission fidelity factor [Colletotrichum
gloeosporioides Nara gc5]
Length = 1038
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 41/265 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P L + + +VE+++AW F++R D T ++I+G
Sbjct: 452 QLWTSKYAPSQLNHICGNKSQVEKIQAWLRNWQKSRKYDFQKRGADGMG--GTRAIIISG 509
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT A+HL A+L +D + + + ++ + + E N +
Sbjct: 510 PPGIGKT-----TAAHLAAKLEGFD-----VIESNASDTRSKKLVENGVSEIMNNTSLLG 559
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
+ + G K + +L++D++ +G +A +R L + T +P ++ E
Sbjct: 560 YFAGDGKKVDG-VKKNIVLIMDEV---DGMSAGDRGGVGALAKFCKKTEVPLILICNE-- 613
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
+ + D R+ + ++ + IC +E L +D +
Sbjct: 614 ------RKLPKMKPFDFVTTDVPFRRPTVE-----QVRSRIMTICHREGLKLPVPVVDAL 662
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM 389
+ S DIRQ I + + L Q M
Sbjct: 663 IEGSNKDIRQIINMISTAKLDQANM 687
>gi|448728943|ref|ZP_21711263.1| replication factor C large subunit [Halococcus saccharolyticus DSM
5350]
gi|445795991|gb|EMA46508.1| replication factor C large subunit [Halococcus saccharolyticus DSM
5350]
Length = 488
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W E D ++ +++ G GVGKT+ +
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAET-WDDHRE-----AVILHGAPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + +W PTI E + + VER+ + S ++ G S
Sbjct: 58 AADM-----DW----PTI------------ELNASDQRTKAVVERVAGEAAKSGTLTGGS 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E F +
Sbjct: 97 AGRRLVVLDEADNLHGNVDRGGSR-AITSLVKEAGQPMVLIANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L +A + ++ SI L ICR+E+ +E ++ +A+++ GD+R A+
Sbjct: 143 MSNSLRNA-CETIEFRDVSARSILPVLRDICRREEVEYESEALEAIAESNSGDLRGAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|241954402|ref|XP_002419922.1| unnamed protein product [Candida dubliniensis CD36]
gi|223643263|emb|CAX42137.1| unnamed protein product [Candida dubliniensis CD36]
Length = 601
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 142/341 (41%), Gaps = 87/341 (25%)
Query: 122 VNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVL 181
+ P S + + Q W +KY+P+++ ++ + K+++V+ + + + + T VL
Sbjct: 38 IQPSPVKKSETINNNQQWIDKYRPKTINDICINPTKLKQVKDSMMKMINKTSN---TRVL 94
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+++G +G K+ TV+ +A L +D+ +EY D F NF+
Sbjct: 95 ILSGPSGSSKSTTVKLLAEELIIVRDAFDSIV--------------IEYNESED-FGNFL 139
Query: 242 ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS-----THIPT 296
+ R KS ++L+++LP ++ R + + + P
Sbjct: 140 QDCRY------------KSKNVILVEELPNIYHLETLKKFRDAIKHWIYQDDNGFSLPPL 187
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARK----------VALNPITNGSIKRTLS 346
+ LTE + DS D S+ ++ VD K + N I N +K T++
Sbjct: 188 IICLTEI-EYDSNDLRI-SYNIENNLTVDTLLGKEIIGLNQVEIIKFNSIANRFLKPTIN 245
Query: 347 KICRQEQY-SLSTEQI-----DLVAQASGGDIRQAITSL--------QFSSLKQDPMLNL 392
KI +QE + +Q+ D + Q GDIR I +L QFSS ++
Sbjct: 246 KIIKQEGILKIINQQVLMRFLDEIFQI--GDIRSIIFNLEMWIKNVKQFSSKQK------ 297
Query: 393 SLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
+SI F R+ +++LFHA+GK ++
Sbjct: 298 -ISID-----------------SFMRENSINLFHAIGKIIY 320
>gi|380484477|emb|CCF39974.1| replication factor RFC1 C terminal domain-containing protein
[Colletotrichum higginsianum]
Length = 1039
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 108/263 (41%), Gaps = 37/263 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF---------STNVLVITGQA 187
QLW KY P + + + +VE+++AW E K F +T ++I+G
Sbjct: 452 QLWTSKYAPTQINHICGNKAQVEKIQAWLENWHKAKKYDFQRRGADGMGATRSIIISGPP 511
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT + +HL A+L +D + + + ++ + + + N + +
Sbjct: 512 GIGKTTS-----AHLAAKLAGFD-----VIESNASDTRSKKLVENGVSDVMNNTSLLGFF 561
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGKA 306
+ G K + +L++D++ +G +A +R L + T IP ++ E
Sbjct: 562 AGDGKKVDG-GKKNIVLIMDEV---DGMSAGDRGGVGALAKFCKKTEIPLILICNE---- 613
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ + +D R+ + ++ + IC +E L + ID + +
Sbjct: 614 ----RKLPKMKPFDFVAMDVPFRRPTVE-----QVRSRIMTICHREGLKLPVQVIDALIE 664
Query: 367 ASGGDIRQAITSLQFSSLKQDPM 389
S DIRQ I + + L Q M
Sbjct: 665 GSNKDIRQIINMISTAKLDQASM 687
>gi|409721541|ref|ZP_11269713.1| replication factor C large subunit [Halococcus hamelinensis 100A6]
gi|448722652|ref|ZP_21705185.1| replication factor C large subunit [Halococcus hamelinensis 100A6]
gi|445789077|gb|EMA39770.1| replication factor C large subunit [Halococcus hamelinensis 100A6]
Length = 482
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K + +R W E D ++ +++ G GVGKT+ +
Sbjct: 3 WTETYRPSTLSEVRGNNKARDALREWAET-WEDHRE-----AVILHGAPGVGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + W PTI E + + +ER+ + S ++ G S
Sbjct: 57 ANDM-----SW----PTI------------ELNASNQRTKAIIERVAGEAAKSGTLSGGS 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E F E
Sbjct: 96 AGRRLVVMDEADNLHGNVDRGGSR-AITSLVKEAGQPMVLIANE-------------FYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L +A + ++ SI+ L ICRQE + ++ +A+ + GD+R A+
Sbjct: 142 MSNALRNA-CETIEFRDVSARSIRPVLRDICRQEGVEYEDDALEAIAEHNSGDLRGAVND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|315425404|dbj|BAJ47069.1| replication factor C large subunit [Candidatus Caldiarchaeum
subterraneum]
gi|343484217|dbj|BAJ49871.1| replication factor C large subunit [Candidatus Caldiarchaeum
subterraneum]
Length = 409
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 42/248 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
QLW EK++PR + E+ + E V+A+ E G K K S ++ G AGVGKT+ V
Sbjct: 3 QLWTEKHRPRKVSEIVGNK---EAVQAFLEWMAGWEKGKPSKKAALLYGPAGVGKTSLVH 59
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP- 255
AS G + E + S EN +ERI S S+
Sbjct: 60 AYASEKGYEVIETN--------------------ASDFRTREN-IERIVGAASGMASLTM 98
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
G+ K I+L+D++ + R + L ++ TH+P +V +
Sbjct: 99 GQRK---IILVDEVDGIDARADAGAV-TSLADIISKTHVPVVLVAND------------P 142
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
++ + L DA + I S+ L KI E + + + + + S GD+R A
Sbjct: 143 WDPRLAPLRDA-CLMIQFRRIPKPSVAAHLKKIAAAENVRVPEDVLRRIVENSEGDLRSA 201
Query: 376 ITSLQFSS 383
I LQ +S
Sbjct: 202 INDLQMAS 209
>gi|149236634|ref|XP_001524194.1| hypothetical protein LELG_04164 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451729|gb|EDK45985.1| hypothetical protein LELG_04164 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 550
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 127/316 (40%), Gaps = 70/316 (22%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
+ +Q W EKY P++ E+ + K+++VR L K + +LV+TG G K+
Sbjct: 42 NKSQVPWLEKYAPQNASEICINPTKLQQVRQLLNNML---KGRLPKKLLVLTGPCGSSKS 98
Query: 193 ATVRQIASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
TV+ +A L G ++ + +EY + F F++ R
Sbjct: 99 TTVKLLARELCGGDIFN----------------DSIVEYQES-ENFSVFLQSCR------ 135
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVR--STHIPTAVVLTECGKADSV 309
K+ +I+L++DLP + R+ L + P + L+E
Sbjct: 136 ------YKNGSIVLLEDLPNVYHFETLQLFREALRHWINYDGQLPPLVLCLSEFEYETDD 189
Query: 310 DSTAQSFEELQS--------ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
T + E + +LV + NP+ + + +T+ ++ + E SL+ ++
Sbjct: 190 QRTGYNLENTMTAETLLGRDLLVSEQVEVIKFNPLAHRFLSKTVKRVLKLE--SLAIDES 247
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDET 421
L GDIR + +L+ S ++ H + R+ +
Sbjct: 248 FLNDIYKTGDIRSVMFNLEMWS---------------------RSRSH----LSMIRENS 282
Query: 422 LSLFHALGKFLHNKRE 437
L++FHALGK +++ +E
Sbjct: 283 LNIFHALGKIIYSSKE 298
>gi|308322095|gb|ADO28185.1| replication factor c subunit 4 [Ictalurus furcatus]
Length = 358
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 51/273 (18%)
Query: 122 VNPDHDSASASSSTQQL------WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDK 175
V P D A+ASSS + W EKY+P+ ++E+A Q EEV A ++ L +
Sbjct: 12 VKPQKDKATASSSGENKRQKPVPWVEKYRPKCVDEVAFQ----EEVVAVLKKSL----EG 63
Query: 176 FSTNVLVITGQAGVGKTATVRQIASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL 234
L+ G G GKT+T+ A L G LY E + + G++
Sbjct: 64 ADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRV------LELNASDERGIQVIR-- 115
Query: 235 DEFENF----VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVR 290
++ +NF V R G + P I+++D+ G A LR+ + R
Sbjct: 116 EKVKNFAQLTVAGTRTDGKSCPPF-------KIIILDEADSMTG-AAQAALRRTMEKESR 167
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICR 350
+T C + V ++ E L S K P+TN + L +IC
Sbjct: 168 TTRF--------CLICNYV---SRIIEPLTS-----RCSKFRFKPLTNEVQQERLLEICA 211
Query: 351 QEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
+E S E ID + + S GD+R+AIT LQ ++
Sbjct: 212 KENLKYSKEGIDALVKVSEGDLRKAITLLQSTA 244
>gi|150400075|ref|YP_001323842.1| replication factor C large subunit [Methanococcus vannielii SB]
gi|166977386|sp|A6URV8.1|RFCL_METVS RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|150012778|gb|ABR55230.1| AAA ATPase central domain protein [Methanococcus vannielii SB]
Length = 492
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 46/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL ++A K E + W E + +K K +++ G G GKT I
Sbjct: 4 WVEKYRPKSLNDVAGHSKTKEALCYWIESFIRGNKQK----PVLLFGPPGSGKTTMAHAI 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ Y +D +E + ++ + ++ +TS S+ G
Sbjct: 60 AND-----YNFDV----------------IELNASDKRNKDVISQVVGTAATSKSLTG-- 96
Query: 259 KSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K + I+L +D L + R + + L ++ P V+LT A+ V A S
Sbjct: 97 KRTLIVLDEVDGLSGNDDRGGVSEIIKVL----KNAENP--VILT----ANDVYKPALSS 146
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+VDAG+ + SI L KI +E + + + I L++ +GGD+R AI
Sbjct: 147 LRNSVTMVDAGS-------VHTNSIPPVLRKIALKEGFEIDEKVIKLISSHAGGDLRAAI 199
Query: 377 TSLQ 380
LQ
Sbjct: 200 NDLQ 203
>gi|317575745|ref|NP_001187540.1| replication factor C subunit 4 [Ictalurus punctatus]
gi|308323307|gb|ADO28790.1| replication factor c subunit 4 [Ictalurus punctatus]
Length = 358
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 51/273 (18%)
Query: 122 VNPDHDSASASSSTQQL------WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDK 175
V P D A+ASSS + W EKY+P+ ++E+A Q EEV A ++ L +
Sbjct: 12 VKPQKDKATASSSGENKRQKPVPWVEKYRPKCVDEVAFQ----EEVVAVLKKSLEGA--- 64
Query: 176 FSTNVLVITGQAGVGKTATVRQIASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL 234
L+ G G GKT+T+ A L G LY E + + G++
Sbjct: 65 -DLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRV------LELNASDERGIQVIR-- 115
Query: 235 DEFENF----VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVR 290
++ +NF V R G + P I+++D+ G A LR+ + R
Sbjct: 116 EKVKNFAQLTVAGTRTDGKSCPPF-------KIIILDEADSMTG-AAQAALRRTMEKESR 167
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICR 350
+T C + V ++ E L S K P+TN + L +IC
Sbjct: 168 TTRF--------CLICNYV---SRIIEPLTS-----RCSKFRFKPLTNEVQQERLLEICA 211
Query: 351 QEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
+E S E ID + + S GD+R+AIT LQ ++
Sbjct: 212 KENLKYSKEGIDALVKVSEGDLRKAITLLQSTA 244
>gi|440635814|gb|ELR05733.1| hypothetical protein GMDG_07576 [Geomyces destructans 20631-21]
Length = 1046
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 50/308 (16%)
Query: 105 QKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW 164
+ EN R SR GL P + + + S QLW KY P + ++ + +V++++ W
Sbjct: 420 ESENAARKAAESR--GLAPPANKNLAGS----QLWTVKYAPSKMNQICGNKGQVDKIQTW 473
Query: 165 FE-----ERLG---DSKDKFST-NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPT 215
+ +LG KD +VI G G+GKT A+HL ++L +D
Sbjct: 474 LQGWPKAHKLGFQLPGKDGLGIYRSIVIYGPPGIGKT-----TAAHLASKLEGYD----- 523
Query: 216 IWQEYMHNCKTGLEYTSKLDEF--ENFVERIRRYGS-TSPSIPGESKSSAILLIDDLPVT 272
+ + + ++ KL EF ++ + G P +SK I+LI D
Sbjct: 524 VIESNASDTRS-----KKLVEFGFQDVLNNNSLLGFFAGHDEPVDSKKKKIVLIMD--EV 576
Query: 273 NGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKV 331
+G +A +R L + + T IP ++ E + ++ + R+
Sbjct: 577 DGMSAGDRGGVGALAKICKKTDIPIILICNEF--------RIPKMNPFRHVVAEVPFRRP 628
Query: 332 ALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM-L 390
++ ++ ++ IC +E LS E +D + + S DIRQ + L + L Q M
Sbjct: 629 TVD-----QVRSRVATICHREGLKLSREAMDALIEGSNKDIRQVVNMLSSAKLDQAAMDF 683
Query: 391 NLSLSISK 398
+ + S+SK
Sbjct: 684 DQTKSMSK 691
>gi|68470942|ref|XP_720478.1| hypothetical protein CaO19.2728 [Candida albicans SC5314]
gi|68471398|ref|XP_720247.1| hypothetical protein CaO19.10242 [Candida albicans SC5314]
gi|46442106|gb|EAL01398.1| hypothetical protein CaO19.10242 [Candida albicans SC5314]
gi|46442348|gb|EAL01638.1| hypothetical protein CaO19.2728 [Candida albicans SC5314]
Length = 589
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 142/334 (42%), Gaps = 79/334 (23%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
P S + ++ QQ W +KY+P++ E+ + K+++V+ + + + + T VLV+
Sbjct: 42 PVKKSQTTINNNQQ-WIDKYRPKTTSEICINPTKLKQVKESMMKMINKTSN---TRVLVL 97
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
+G +G K+ TV+ +A L +D+ +EY DE E+F++
Sbjct: 98 SGPSGSSKSTTVKLLAEELITVRDAFDS--------------VVVEY----DESEDFLKF 139
Query: 244 IR--RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTH----IPTA 297
++ RY KS ++L+++LP ++ R + + +P
Sbjct: 140 LQDCRY-----------KSKNVILVEELPNIYHLETLKKFRDAIRDWIYQDDNGFSLPPL 188
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVD----------AGARKVALNPITNGSIKRTLSK 347
++ + DS D S+ ++ VD + N I N +K T++K
Sbjct: 189 IICLSEIEYDSNDLRI-SYSIENNLTVDTLLGKEITGLTQVENIKFNSIANRFLKPTINK 247
Query: 348 ICRQEQY-SLSTEQI-----DLVAQASGGDIRQAITSLQ--FSSLKQDPMLNLSLSISKP 399
I +QE + +QI D + Q GDIR I +L+ ++KQ +S+
Sbjct: 248 IIKQEGILKIVNQQILMRFLDEIFQI--GDIRSIIFNLEMWIKNVKQSLTNRISID---- 301
Query: 400 NFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
F R+ +++LFHA+GK ++
Sbjct: 302 ---------------SFMRENSINLFHAIGKIIY 320
>gi|154338281|ref|XP_001565365.1| putative replication factor C, subunit 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062414|emb|CAM42275.1| putative replication factor C, subunit 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 664
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-----RLGDSKDKFSTNVLVITGQA 187
+S +LWA+KYKPRS+ E+ +++AW E GD K + ++++G
Sbjct: 17 TSRNELWADKYKPRSIAEMCYP-VCANKLKAWLENFTPIGSPGDDPKK--PHGVLLSGSP 73
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
GVGKT TV +A LG + E++ + K+ E S L F R Y
Sbjct: 74 GVGKTTTVYVVARELGRTVVEYNASD-------FRSRKSLRENVSDLINNRAFSARATSY 126
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
++ +LL+D++ + E ++ +++ST IP +L C
Sbjct: 127 ------------TTVVLLMDEVDGCDIGGVGE-----VIEMLKSTRIP---ILCTCN--- 163
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
D L + + D N + N R L++ E SLS + + +
Sbjct: 164 --DRWHPKLRSLLNYVEDMRFSHPPCNVVANYLCDRVLAR----EGISLSKPLLQDIIKT 217
Query: 368 SGGDIRQAITSLQFSSLKQ 386
SG DIR + +LQ L++
Sbjct: 218 SGSDIRSMLNNLQLWCLRR 236
>gi|448346404|ref|ZP_21535289.1| replication factor C large subunit [Natrinema altunense JCM 12890]
gi|445632607|gb|ELY85818.1| replication factor C large subunit [Natrinema altunense JCM 12890]
Length = 499
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E S D +V+V G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLEEWAE-----SWDDHRKSVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +E+I + S ++ G
Sbjct: 58 AADMG-----W----PV------------MELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ + P +V E F E
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSRE-VTRVVKDANQPIVLVANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E ++ +A+++ GD+R A+
Sbjct: 143 MSKSLRNA-CETIEFRDVSKRSIVPVLRDICRREGVEFEEGALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|403357582|gb|EJY78418.1| hypothetical protein OXYTRI_24424 [Oxytricha trifallax]
Length = 764
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 155/409 (37%), Gaps = 115/409 (28%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGK 191
S+ LW+ KY P+SL+EL +Q+ K++E FE+ + S NV ++ TG +G GK
Sbjct: 44 SSDDLWSVKYAPKSLDELIIQKPKIQE----FEKIM------ISDNVKLMIFTGPSGCGK 93
Query: 192 TA-------------TVRQIASH-------------------------LGARLYEWDTPT 213
+V Q+ S L + +Y ++ T
Sbjct: 94 NTLIDLYCQKHNIQKSVFQLESESKNYNFLQDNGIYQAKVGNLDYPEDLESLIYFINSST 153
Query: 214 PTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESK----------SSAI 263
+ KTGL+ T KL F R+ + T E + + I
Sbjct: 154 LSAQGSVSGTAKTGLKTTLKLSSFNTKPNRM-SHADTEMKSEDEMRPDNNLQQIQLNRKI 212
Query: 264 LLIDDLP------VTNGRTAFERLRQCLL-LLVRSTHIPTAVVL----TECGKA------ 306
L+I+ +P R + + CLL +L R T P ++ E KA
Sbjct: 213 LVINSVPQCLSLFSARRRELLKDFQTCLLNVLNRQTPTPLIIITFSDQAERSKAFLLRIF 272
Query: 307 --------DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ-YSLS 357
+ S A S Q ++ A+N SI + L +I E Y+++
Sbjct: 273 GKEILNFQGNSQSAANSQTYSQQNNSSPYVQQFAINSPHEKSIDKVLKQIVFNESIYNVA 332
Query: 358 TEQIDLVAQASGGDIRQAITSLQFS-SLKQDPMLNLSLSIS---KPNFPE---------- 403
+ + S D+R AI ++QF + K+ N+ + KPN +
Sbjct: 333 DSTLTEIRDQSNKDLRNAINTMQFKLAGKKAGGTNVQATAGKKLKPNTKKRKNTSDDEEF 392
Query: 404 -------------EKADGHGGFSIQ-FGRDETLSLFHALGKFLHNKRET 438
+K + + +++ F +D S+FH LGKFL+NKRE
Sbjct: 393 MMSDTQLQKVKGLKKQNSNQDLNVEAFEKDNNFSIFHGLGKFLYNKREN 441
>gi|156065801|ref|XP_001598822.1| hypothetical protein SS1G_00911 [Sclerotinia sclerotiorum 1980]
gi|154691770|gb|EDN91508.1| hypothetical protein SS1G_00911 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1047
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 41/268 (15%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLV 182
++ QLW KY P + ++ + +VE++++W F++R D + ++
Sbjct: 454 TSSQLWTTKYAPTQMNQICGNKGQVEKIQSWLKGWPNAHKYNFQKRGADGLGGY--RAII 511
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
I G G+GKT A+HL A+L +D I + + ++ + L E N
Sbjct: 512 IHGPPGIGKTT-----AAHLAAKLAGYD-----ILERNASDVRSKKLVETGLSEVLNNTS 561
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
+ + +I ++K +L++D++ +G ++ +R L + ++T P ++
Sbjct: 562 VLGYFAGDGKNI-DKTKKKIVLIMDEV---DGMSSGDRGGVGALAKICKTTDTPMILI-- 615
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D + + D ++ ++ ++ ++ IC +E L + I
Sbjct: 616 -CN-----DRRLPKMKPFDFVTFDMPFKRPTVD-----MVRSRIATICHREGIKLPVQVI 664
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPM 389
D + + S DIRQ I + L Q M
Sbjct: 665 DALIEGSNNDIRQIINMISTVKLDQTAM 692
>gi|284165192|ref|YP_003403471.1| ATPase AAA [Haloterrigena turkmenica DSM 5511]
gi|284014847|gb|ADB60798.1| AAA ATPase central domain protein [Haloterrigena turkmenica DSM
5511]
Length = 497
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E G + +++ G GVGKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNNKARDKLEEWAETWDG------HRDAVIVHGSPGVGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A +G W P +E + + +ERI S S ++ G
Sbjct: 57 AGDMG-----W----PV------------MELNASDSRGADVIERIAGEASKSGTLTGGE 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + + + +V+ + P +V E F +
Sbjct: 96 AGRRLVILDEADNFHGNADYGGSAE-VTRVVKDANQPIVLVANE-------------FYD 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L ++ + ++ SI L ICR+E E ++ +A+ + GD+R A+
Sbjct: 142 MSQSLRNS-CETIEFRDVSKRSIVPVLRDICRREDVEFEEEALEKIAEDTSGDLRSAVND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|448728046|ref|ZP_21710386.1| replication factor C large subunit [Halococcus morrhuae DSM 1307]
gi|445788712|gb|EMA39418.1| replication factor C large subunit [Halococcus morrhuae DSM 1307]
Length = 490
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 50/246 (20%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E W E R +V+ G GVGKT+
Sbjct: 3 WTEKYRPSTLSEVRGNNKARDAFAEWAETWEEHR----------EAIVLHGAPGVGKTSA 52
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ + +W PTI E + ++ VER+ + S ++
Sbjct: 53 AHALAADM-----DW----PTI------------ELNASNQRTKSVVERVAGEAAKSGTL 91
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G S ++++D+ +G R + LV+ P ++ E
Sbjct: 92 TGGSAGRRLVIMDEADNLHGNVDRGGSR-AITGLVKEASQPMVLIANE------------ 138
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
F ++ L +A + ++ SI L ICR+E + + +D +A+ + GD+R
Sbjct: 139 -FYDMSKSLRNA-CETIEFRDVSARSILPVLRDICRREDVAYDDDALDAIAERNSGDLRG 196
Query: 375 AITSLQ 380
A+ LQ
Sbjct: 197 AVNDLQ 202
>gi|435850859|ref|YP_007312445.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433661489|gb|AGB48915.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 500
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 44/249 (17%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
+T + WAEKY+P+SL ++ + ++R+W E+ L + ++ +++ G AGVGKT+
Sbjct: 2 TTPKEWAEKYRPKSLADVLGNPTAIRQLRSWAEQWLDGTPEQ---KAVLLHGPAGVGKTS 58
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPS 253
T +A + EW+ +E + + +ERI S +
Sbjct: 59 TAHALAQDM-----EWEV----------------IELNASDQRTADVIERIAGSASRMST 97
Query: 254 IPGESKSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+ G S I+L D++ T+ R + + +L +T P ++ + A + S
Sbjct: 98 LGGMSSKRLIVLDEADNMHGTSDRGGPKAIGNIIL----ATGQPIVLIAND---AYGIPS 150
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+ +S ++L ++ N + S+ L ++ ++E I+ +A+ + GD
Sbjct: 151 SVRS-----NLL------EIKFNALQTRSMIPALKQVAQKEGLMCGVGIIEKIAENADGD 199
Query: 372 IRQAITSLQ 380
+R AI LQ
Sbjct: 200 MRSAINDLQ 208
>gi|312376745|gb|EFR23745.1| hypothetical protein AND_12320 [Anopheles darlingi]
Length = 655
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 142 KYKPRSLEELAVQRKKVEEVRAWFEERLGDSK---DKFSTNVLVITGQAGVGKTATVRQI 198
+++P +LA+ KKVEE++ W E L DS+ + + +L++TG +G GK+ V+ I
Sbjct: 15 QFEPVKEADLAIHVKKVEEIKHWLEAALQDSEYEPEGIAKQILLVTGPSGSGKSVCVKTI 74
Query: 199 ASHLGARLYEWDTPT 213
A L + EW TP
Sbjct: 75 AKQLKCDVKEWTTPV 89
>gi|403358750|gb|EJY79030.1| BRCT domain containing protein [Oxytricha trifallax]
Length = 993
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 55/283 (19%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---EERL--GDSKD---- 174
P SA + QLW +KY P+S +L + + R W E+ + G KD
Sbjct: 339 PKLPSAKPLPTGTQLWTDKYAPQSFSDLVGNKSVIVNFREWLVDWEDVVIRGQKKDIQPK 398
Query: 175 ------------KFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH 222
K + +I+G G+GKT++VR IA LG L E++ + ++ +
Sbjct: 399 GGWGRAAYQDLPKINARACLISGPPGIGKTSSVRIIAKELGYNLMEFNA-SDNRSKKSIE 457
Query: 223 NCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR 282
N + +D+++ +Y S + K ++L+D++ +G +A +R
Sbjct: 458 NLLQNMTTCKSIDKYQ-------QYNLMSKN----KKEKTLILMDEV---DGVSANDRGG 503
Query: 283 -QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSI 341
L+L+++ T IP V + +L S+L K A P +
Sbjct: 504 LGALILIIKKTLIPIVCVANDS-----------KHRKLVSLLNHCYDLKFA-KPSNEDML 551
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQ---ASGGDIRQAITSLQF 381
KR + I +E +L +++D+ Q SG DIRQ I +Q
Sbjct: 552 KR-IKFIAEKE--NLKIDRLDIYTQIFDMSGQDIRQVINMIQM 591
>gi|351737548|gb|AEQ60583.1| replication factor C small subunit [Acanthamoeba castellanii
mamavirus]
gi|398257227|gb|EJN40835.1| hypothetical protein lvs_R331 [Acanthamoeba polyphaga
lentillevirus]
Length = 319
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 59/274 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV-LVITGQAGVGKTATVRQ 197
W EKY+P +++++ + +++ + ++R NV L+ITG GVGKT+TVR
Sbjct: 7 WIEKYRPVNIDDVIIDDNISKQINIFLQDR---------ENVHLIITGSPGVGKTSTVRC 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
IA L + Q Y LE + D R S S IP
Sbjct: 58 IAKELLGE---------DMSQGY-------LEINAAED---------RGVRSISTIIPPF 92
Query: 258 SK------SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
K S I+L+D+ + + ++ + +++ T + T +
Sbjct: 93 CKKVFAANKSKIILLDEADIMTSKCQYD-----INNMIKKFGRKTKFIFT-------CND 140
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+++ E++QSI R + +T+ I + LSKIC E+ + + + S GD
Sbjct: 141 SSKIIEDIQSI-----CRILRFKKLTDEQINQYLSKICVNEKIPYDEQGLRTICYISNGD 195
Query: 372 IRQAITSLQFSSLKQDPML-NLSLSISKPNFPEE 404
+R++I LQ ++ + NL L I K PE+
Sbjct: 196 MRKSINDLQKTAFTFGKITKNLVLKICKVPDPED 229
>gi|432331675|ref|YP_007249818.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
gi|432138384|gb|AGB03311.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
Length = 471
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 123/312 (39%), Gaps = 70/312 (22%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P L +L + V ++ W + S+ L++ G+ G+GKT+ +
Sbjct: 3 WAEKYRPAHLADLVGNKTPVMQIAEWAKTWTRKSRP------LLLYGKPGIGKTSAAYAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + W+ +E + +ERI GS + S+ G +
Sbjct: 57 ANDM-----NWEV----------------VELNASDQRTAAVIERIAGAGSVTASLTGAT 95
Query: 259 KSSAIL-LIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ +L D+L R + + +C +R P ++ +
Sbjct: 96 RKLIVLDEADNLQGNADRGGAKAILEC----IRQAQQPMILIAND--------------- 136
Query: 318 ELQSILVDAGAR--KVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
L I + AR V + SI L +C E+ S S + +A+++GGDIR A
Sbjct: 137 -LYGISPEIRARCEPVQFKAVPARSIVPRLRYLCSAEKISCSDAALQSIAESAGGDIRSA 195
Query: 376 ITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK 435
+ L S+L +D + + + S+ +DE +S+F +L L K
Sbjct: 196 VNMLYASALGRDSLDDGQVHTSQ-------------------KDERVSIF-SLITALFGK 235
Query: 436 RETDNLVKMDQD 447
D L+++ D
Sbjct: 236 TRDDELMRLSYD 247
>gi|212224564|ref|YP_002307800.1| replication factor C large subunit [Thermococcus onnurineus NA1]
gi|212009521|gb|ACJ16903.1| replication factor C, large subunit [Thermococcus onnurineus NA1]
Length = 500
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 45/250 (18%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVG 190
A S+ W EKY+PR L E+ Q K +E+VRAW E L + K L++ G G G
Sbjct: 2 AMPSSDVPWVEKYRPRRLSEIVNQNKALEQVRAWIEAWLHGNPPK--KKALLLAGSPGTG 59
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
KT T+ +A G + E + E E+I RY
Sbjct: 60 KTTTIYALAREYGFEVIELNASD------------------------ERTYEKIERYVQA 95
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
+ ++ K ++ +D+ N + R L+ R+ I +A E + +
Sbjct: 96 AYTMDILGKRRKLIFLDE--SDNIEPSGAREIAKLIDKARNPIIMSANHYWEVPR--EIR 151
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
+ AQ E ++ I + L +I + E ++ E + +A+ + G
Sbjct: 152 NKAQIVE---------------YKRLSQRDIMKALIRILKAEGVTVPKEILQEIAKRANG 196
Query: 371 DIRQAITSLQ 380
D+R AI LQ
Sbjct: 197 DLRAAINDLQ 206
>gi|448373527|ref|ZP_21557613.1| replication factor C large subunit [Halovivax asiaticus JCM 14624]
gi|445661479|gb|ELZ14262.1| replication factor C large subunit [Halovivax asiaticus JCM 14624]
Length = 511
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 54/294 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L + K + +R W E S D V+V G GVGKT+ +
Sbjct: 4 WTEKYRPDTLSAVRGNDKARDALREWAE-----SWDDHRKAVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + W P +E + ++ ++R+ S S ++ G +
Sbjct: 58 AADM-----NW----PV------------MELNASDHRGKDIIDRVAGEASKSGTLTGGT 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R + +V+S P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSR-AVTDVVKSASQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L +A + + ++ SI L ICR+E + + +A+ + GD+R A+
Sbjct: 143 MSNSLRNA-CKTIEFRDVSTRSIVPVLRDICRKEDIEFEADALRAIAENTSGDLRSAVND 201
Query: 379 LQFSS-----LKQDPMLNLSLSISKPNFP------EEKADGHGGFSIQFGRDET 421
LQ + L +D ++ S ++ F +EK D G + DET
Sbjct: 202 LQAIAESTERLTEDDVVTGSRDTTEGIFDYLDELIKEK-DAEGALKASYDVDET 254
>gi|367055380|ref|XP_003658068.1| hypothetical protein THITE_2124524 [Thielavia terrestris NRRL 8126]
gi|347005334|gb|AEO71732.1| hypothetical protein THITE_2124524 [Thielavia terrestris NRRL 8126]
Length = 1058
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 41/265 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P L ++ + VE ++AW F++R D + ++I+G
Sbjct: 467 QLWTTKYAPTQLNQICGNKSLVERIQAWLRNWPKSRKYNFQKRGADGMGGY--RAIIISG 524
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT A+HL ARL +D + + + ++ S + E N +
Sbjct: 525 PPGIGKT-----TAAHLAARLEGYD-----VLESNASDTRSKKLVESGVGEVLNNTSLLG 574
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
+ + SK +L++D++ +G +A +R L + T +P ++ C
Sbjct: 575 FFAGDGKKV-DASKKKIVLVMDEV---DGMSAGDRGGVGALAKFCKKTDVPLILI---CN 627
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
D + + D + T I+ + IC +E L ++ +
Sbjct: 628 -----DRRLPKMKPFDHVAFD-----IRFQRPTVDQIRSRIMTICHREGLKLPVPVVNAL 677
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM 389
+ SG DIRQ I L + L Q M
Sbjct: 678 IEGSGRDIRQIINMLSTAKLDQTTM 702
>gi|433590863|ref|YP_007280359.1| AAA ATPase [Natrinema pellirubrum DSM 15624]
gi|448331730|ref|ZP_21520981.1| replication factor C large subunit [Natrinema pellirubrum DSM
15624]
gi|433305643|gb|AGB31455.1| AAA ATPase [Natrinema pellirubrum DSM 15624]
gi|445628689|gb|ELY81992.1| replication factor C large subunit [Natrinema pellirubrum DSM
15624]
Length = 498
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E + D +V+V G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLEEWAE-----TWDDHRESVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +E+I S S ++
Sbjct: 58 ANDMG-----W----PV------------MELNASDSRGADVIEKIAGEASKSGTLTAGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ + P +V E F E
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKDANQPIVLVANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L +CR+E E ++ +A+++ GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDVCRREGIEFEEEALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|118431492|ref|NP_147998.2| replication factor C large subunit [Aeropyrum pernix K1]
gi|42559546|sp|Q9YBS5.2|RFCL_AERPE RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|116062817|dbj|BAA80523.2| replication factor C large subunit [Aeropyrum pernix K1]
Length = 479
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 71/314 (22%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVG 190
+ S++ W KY+P+ +E++ Q + + + WF+ L G DK + ++ G GVG
Sbjct: 5 ARSSRVPWVIKYRPKRVEDVVNQDQAKKILVPWFKAWLEGRKPDKRAA---LLYGPPGVG 61
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
KT+ V IAS + E + +Y + D +ERI S
Sbjct: 62 KTSLVEAIASEFNLEMIELNAS----------------DYRRRSD-----IERIVGAASR 100
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
S+ K ++L+D++ N R + + LL ++++T P +V+T D
Sbjct: 101 KRSM---FKRGVVILLDEVDGINPREDAGGI-EALLSVIKTTENP--IVMTAN---DPWK 151
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
+ E+ S++V+ P+T I L +IC E+ E + +A+ S G
Sbjct: 152 DFLRPLREV-SLMVE-------FRPLTLTHIVAVLQRICEAERIECEREALRYIAERSEG 203
Query: 371 DIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF------GRDETLSL 424
D+R AI LQ A+G+G ++ GR++++ +
Sbjct: 204 DLRSAINDLQAV-----------------------AEGYGRVTLTLAREIVRGREKSIDI 240
Query: 425 FHALGKFLHNKRET 438
+ L + + R+
Sbjct: 241 WRTLNQVFYKPRQA 254
>gi|374633941|ref|ZP_09706306.1| AAA ATPase [Metallosphaera yellowstonensis MK1]
gi|373523729|gb|EHP68649.1| AAA ATPase [Metallosphaera yellowstonensis MK1]
Length = 438
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 45/254 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P+ L+E+ Q +++R W E LG K T L++ G G GKT +
Sbjct: 6 WTIKYRPKVLDEVENQEDVKKQLREWIESWLGR---KPETKGLLLYGPPGTGKTTLAYAL 62
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G + E T + + N VER GS +
Sbjct: 63 ARTYGLEIIE-----------------TNASDSRNMTSLRNIVERASMAGSLF------N 99
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++ +D++ R F + +L ++R+T P + D D + E
Sbjct: 100 ERGKLIFLDEVDGIQPRQDFGAI-SAILEILRNTKYPILMAAN-----DPWDPNLRDLRE 153
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + + + ++R L +IC +E+ ID + AS GD R AI
Sbjct: 154 --------AVKMIEVKRLGKVPLRRLLKRICTEERIKCEDGAIDSIIDASDGDARYAINF 205
Query: 379 LQ-----FSSLKQD 387
L+ + +K+D
Sbjct: 206 LESIAEGYREVKED 219
>gi|403362369|gb|EJY80911.1| BRCT domain containing protein [Oxytricha trifallax]
Length = 993
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 55/283 (19%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---EERL--GDSKD---- 174
P SA + QLW +KY P+S +L + + R W E+ + G KD
Sbjct: 339 PKLPSAKPLPTGTQLWTDKYAPQSFSDLVGNKSVIVNFREWLVDWEDVVIRGQKKDIQPK 398
Query: 175 ------------KFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH 222
K + +I+G G+GKT++VR IA LG L E++ + ++ +
Sbjct: 399 GGWGRAAYQDLPKINARACLISGPPGIGKTSSVRIIAKELGYNLMEFNA-SDNRSKKSIE 457
Query: 223 NCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR 282
N + +D+++ +Y S + K ++L+D++ +G +A +R
Sbjct: 458 NLLQNMTTCKSIDKYQ-------QYNLMSKN----KKEKTLILMDEV---DGVSANDRGG 503
Query: 283 -QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSI 341
L+L+++ T IP V + +L S+L K A P +
Sbjct: 504 LGALILIIKKTLIPIVCVANDS-----------KHRKLVSLLNHCYDLKFA-KPSNEDML 551
Query: 342 KRTLSKICRQEQYSLSTEQIDLVAQ---ASGGDIRQAITSLQF 381
KR + I +E +L +++D+ Q SG DIRQ I +Q
Sbjct: 552 KR-IKFIAEKE--NLKIDRLDIYTQIFDMSGQDIRQVINMIQM 591
>gi|448307509|ref|ZP_21497404.1| replication factor C large subunit [Natronorubrum bangense JCM
10635]
gi|445595681|gb|ELY49785.1| replication factor C large subunit [Natronorubrum bangense JCM
10635]
Length = 495
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K ++++ W + D ++ +++ G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLKEWAQT-WDDHRE-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ LG W P + N K + +ERI + S ++
Sbjct: 58 ANDLG-----W----PVMELNASDNRKA------------DVIERIAGEAAKSGTLTAGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V++ + P +V E F +
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSRE-VTRVVKNANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A V ++ SI L ICR+E + + +A A+ GD+R A+
Sbjct: 143 MSQSLRNA-CETVEFRDVSKRSIVPVLRDICRREGIEFEEDALKKIADATSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|284161883|ref|YP_003400506.1| ATPase AAA [Archaeoglobus profundus DSM 5631]
gi|284011880|gb|ADB57833.1| AAA ATPase central domain protein [Archaeoglobus profundus DSM
5631]
Length = 499
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 32/243 (13%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P++L+++ + +E V AW + ++ L++ G GVGKT+
Sbjct: 2 LWVEKYRPKTLKDVVADKDILERVIAWAKR----WQEGIPQKPLLLGGPPGVGKTSLALA 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A+ G + E + WQ ++ F E I S + E
Sbjct: 58 LANTFGWEVVELNASDQRSWQ-----------IIRRIVGEAAFSETI---SSEGEFLSSE 103
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
S ++L+D++ + + F + LL R P ++LT A+ ++
Sbjct: 104 SGRLKLILLDEVDNISKKEDFGGESALIKLLKRKPRQP--IILT----ANDPYKLSKELR 157
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
+L V + I + L +IC E + L+AQ +GGD+R AI
Sbjct: 158 DLCEF--------VQFKRLRTDQIVKVLERICASEGIKADRNALRLIAQNAGGDLRAAIN 209
Query: 378 SLQ 380
LQ
Sbjct: 210 DLQ 212
>gi|339898374|ref|XP_001465928.2| putative replication factor C, subunit 1 [Leishmania infantum
JPCM5]
gi|321399537|emb|CAM68360.2| putative replication factor C, subunit 1 [Leishmania infantum
JPCM5]
Length = 660
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 44/259 (16%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-----RLGDSKDKFSTNVLV 182
+A+ S +LWA+KYKPRS+ E+ +++AW E GD K + ++
Sbjct: 11 TANPVPSRSELWADKYKPRSIAEMCYP-VCANKLKAWLETFTPIGSPGDDPKK--PHGVL 67
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
++G GVGKT TV +A LG + E++ ++ S+ EN +
Sbjct: 68 LSGSPGVGKTTTVYVVAHELGRTVVEYNAS----------------DFRSRKSLKENVSD 111
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
I + + S+ S ++ ILL+D++ + E ++ +++ST IP +L
Sbjct: 112 LI---SNRAFSVSATSYTNVILLMDEVDGCDIGGVGE-----VIEMLKSTRIP---ILCT 160
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D L + + D N + N R L++ E SLS +
Sbjct: 161 CN-----DRWHPKLRSLLNYVEDMRFSHPPCNIVANYLCDRVLAR----EGISLSKPLLQ 211
Query: 363 LVAQASGGDIRQAITSLQF 381
+ + SG DIR + +LQ
Sbjct: 212 DIIKNSGSDIRNMLNNLQL 230
>gi|374628364|ref|ZP_09700749.1| Replication factor C [Methanoplanus limicola DSM 2279]
gi|373906477|gb|EHQ34581.1| Replication factor C [Methanoplanus limicola DSM 2279]
Length = 332
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 57/280 (20%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P E++ Q + + + E G SK+ +++ G G GKT V+
Sbjct: 2 LWIEKYRPEKFEDIYGQEEVISHI-----EGFGRSKN---IPHMLLFGPHGTGKTCAVQS 53
Query: 198 IASHLGARLYEWDTPTPTIWQE--YMHNCKTGLE--------YTSKLDEFENFVERIRRY 247
+A + ++ ++ Q KT LE Y + NF ++ Y
Sbjct: 54 LAKEIYG---DYSDENLSVIQAGILFTQGKTWLENEERFSHLYKKEDSLINNFKHIVKWY 110
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERL-----RQC-LLLLVRSTHIPTAVVLT 301
S P + K A D LP + A R+ R C +LL R + + +
Sbjct: 111 ASMRP-FEADFKILAFEEADMLPFA-AQAALRRIMEKYSRTCRFILLTRRSSTIIPAIYS 168
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS---LST 358
C + P+ N ++ R + +I ++E+ S +
Sbjct: 169 RC-------------------------LPLFFKPLPNETVVRIMKEIMKKEEISGDKIPD 203
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
+ +DL+A+ S GD R+AIT LQ ++ K D + LS S+
Sbjct: 204 DDLDLIAEFSKGDCRKAITYLQITAAKSDEADIIELSRSE 243
>gi|198413031|ref|XP_002123161.1| PREDICTED: similar to RAD17 homolog (S. pombe), partial [Ciona
intestinalis]
Length = 328
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 293 HIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
+P +++++ DS S E + + NP++ + + LS++ E
Sbjct: 7 QMPLVIIISDGSTFDSFKRFLSSKE--------SSVTNIRFNPVSTTLLIKALSRVSTSE 58
Query: 353 QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGF 412
+ S + + + L+A AS GD+R AI +LQFS ++ K K G
Sbjct: 59 RCSTNKDDLSLIASASAGDVRSAINNLQFS----------CKTVGKST---RKTSGTKSK 105
Query: 413 SIQFGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQA 472
+I G+D +L +F ALGK + KRE K + V K+ R L + PE +L Q
Sbjct: 106 AIN-GKDTSLIMFRALGKVFYCKRE-----KRKKAESVESSKY-RDDLIV-QPEDILEQC 157
Query: 473 HGQARPVLDFLHEN 486
FLH+N
Sbjct: 158 CLSGSAFSLFLHQN 171
>gi|448392808|ref|ZP_21567438.1| replication factor C large subunit [Haloterrigena salina JCM 13891]
gi|445664127|gb|ELZ16847.1| replication factor C large subunit [Haloterrigena salina JCM 13891]
Length = 498
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E D +D +++ G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDKLEEWAES-WDDHRD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A +G W P +E + + +ER+ S S ++ G
Sbjct: 58 AGDMG-----W----PV------------MELNASDSRGADVIERVAGEASKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + + + +V+ + P +V E F +
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSAE-VTRVVKDANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L ++ + ++ SI L ICR+E E ++ +A+ + GD+R A+
Sbjct: 143 MSQSLRNS-CETIEFRDVSKRSIVPVLRDICRREDIEFEEEALEKIAEDTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|398411793|ref|XP_003857232.1| hypothetical protein MYCGRDRAFT_32502 [Zymoseptoria tritici IPO323]
gi|339477117|gb|EGP92208.1| hypothetical protein MYCGRDRAFT_32502 [Zymoseptoria tritici IPO323]
Length = 1078
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 57/300 (19%)
Query: 114 TPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE-----ER 168
P + + VNPD + +LW +Y P+SL ++ + +VE+++ W +R
Sbjct: 472 APQKAKAPVNPD-------APDSRLWTVRYAPQSLNQICGNKTQVEKIQTWLRMFPKNQR 524
Query: 169 LG---DSKDKFSTN-VLVITGQAGVGKTATVRQIASHLGARLYEWD----TPTPTIWQEY 220
G KD T+ ++I G G+GKT A+HL A+L +D + T ++
Sbjct: 525 TGFKMPGKDGSGTHRAIMIHGPPGIGKT-----TAAHLVAKLEGYDIVESNASDTRSKKL 579
Query: 221 MHNCKTG-LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFE 279
+ G L TS + F V+ + SK +L++D++ +G +A +
Sbjct: 580 VETGLKGVLSTTSLMGYFSRGVDDVE-----------ASKKKLVLIMDEV---DGMSAGD 625
Query: 280 RLRQCLLLLV-RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITN 338
R L V + T +P ++ C D + + D R+ P T+
Sbjct: 626 RGGVGALAAVCKKTQVPMILI---CN-----DRKLPKMKPFDFVTYDVPFRR----PTTD 673
Query: 339 GSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
I+ ++ I +E + I+ + + SG DIRQ + + + L + NLS SK
Sbjct: 674 -MIRSRITTIAYREGLKMPANVINALIEGSGADIRQVVNMISTAKLDEQ---NLSYEDSK 729
>gi|448578044|ref|ZP_21643479.1| replication factor C large subunit [Haloferax larsenii JCM 13917]
gi|445726585|gb|ELZ78201.1| replication factor C large subunit [Haloferax larsenii JCM 13917]
Length = 487
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 143/368 (38%), Gaps = 70/368 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W G S D ++ G G+GKT+ +
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEW-----GKSWDDHR-EAAIVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ LG W+T +E + + +ER + + ++ G S
Sbjct: 58 AADLG-----WET----------------VELNASDQRTADVIERFAGRAAKNATLAGSS 96
Query: 259 KSSA---ILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 SGTSTRQLVILDEADNIHGN--YDRGGASAITKLVKSSSQPIVLIANE------------ 142
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
F ++ L +A R++ ++ SI L ICR+E + ++ +A + GD+R
Sbjct: 143 -FYDMSRGLRNA-CREIEFRDVSARSIVPVLRDICRKEGVEFESAALERIADMNSGDLRS 200
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 201 AVNDLQ------------AIAEGRDQITEENV-------VMGDRDRSVGLFEFLDAVLKE 241
Query: 435 KRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
K + L A+ V + L ++ ++ + AR + + WL +R
Sbjct: 242 KPAQEALYT----AYDVDETPDDLTKWIEDKVSLVYEPDELARAYEFLANADRWLGRVRA 297
Query: 495 TMFYNLLR 502
T Y+ R
Sbjct: 298 TQNYSYWR 305
>gi|448339295|ref|ZP_21528323.1| replication factor C large subunit [Natrinema pallidum DSM 3751]
gi|445620524|gb|ELY74020.1| replication factor C large subunit [Natrinema pallidum DSM 3751]
Length = 500
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E S D +V+V G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLEEWAE-----SWDDHRKSVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +E+I + S ++ G
Sbjct: 58 ATDMG-----W----PV------------MELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ + P +V E F +
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSRE-VTRVVKDANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E ++ +A+++ GD+R A+
Sbjct: 143 MSKSLRNA-CETIEFRDVSKRSIVPVLRDICRREGVEFEEGALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|320583398|gb|EFW97611.1| hypothetical protein HPODL_0241 [Ogataea parapolymorpha DL-1]
Length = 684
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 54/272 (19%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAW--------FEERLGDSKDKFS---TNVLV 182
ST +LW EKY+P +L + ++ W F + ++ D ++ VL+
Sbjct: 99 STYKLWTEKYRPSGFLDLVGNERTNRQILQWINQWNQVVFGKPCAETTDFYNRPDRRVLL 158
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWD--------TPTPTIWQEYMHNCKTGLEYTSKL 234
I G G+GKT+ I+ LG + E + T I +N TG L
Sbjct: 159 IHGPPGIGKTSIAHVISKQLGYEVREINASDERAGATVQDKIKNAMKNNSLTGSPVCLIL 218
Query: 235 DEFENFVERIRRYGSTS---PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS 291
DE + E +G S I + + +A L +D T G+T E L++ ++ L
Sbjct: 219 DEIDGATE----HGFISILVDLINKDRRDTASLGLD----TKGKTQREILKRPIIALCND 270
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
+ P E+L+ +A +K L KIC++
Sbjct: 271 VYSPV-------------------LEKLR-----PHCETIAFRKSHPRLVKSKLKKICQR 306
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
E + +D + +++ GD+R I LQF+S
Sbjct: 307 EALVVDDRVLDAIIESTEGDLRNCINFLQFNS 338
>gi|392921918|ref|NP_001256606.1| Protein RFC-1, isoform a [Caenorhabditis elegans]
gi|3875243|emb|CAA99812.1| Protein RFC-1, isoform a [Caenorhabditis elegans]
Length = 839
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 45/266 (16%)
Query: 139 WAEKYKPRSLEELAVQR-------KKVEEVRAWFEERLGD--------------SKDKFS 177
W +KYKP+ + EL Q K +E ++ W + LG+ S+D S
Sbjct: 280 WVDKYKPKRMGELVGQNGDKSPINKLLEWIKDWAKHNLGEGAKIKKPKPAPWMSSQDGTS 339
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
+++G GVGKT LG +L E + + ++ +K+ E
Sbjct: 340 FKAALLSGSPGVGKTTCAYMACQQLGLQLVEMNA----------SDVRSKKHLEAKIGEL 389
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTA 297
+ + +G+ + K IL++D++ +G + + L+ +++ + IP
Sbjct: 390 SGSHQIEQFFGAKKCAPQDNQKVHHILIMDEVDGMSGNEDRAGISE-LIQIIKESKIPII 448
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
+ C D L + D K + +I+ + IC QE+ +
Sbjct: 449 CI---CN-----DRQHPKIRTLANYCYDLRFPKPRVE-----TIRSRMMTICSQEKMKIG 495
Query: 358 TEQIDLVAQASGGDIRQAITSLQFSS 383
E++D + + SG D+RQ I +LQ S
Sbjct: 496 KEELDEIIELSGHDVRQTIYNLQMRS 521
>gi|116205063|ref|XP_001228342.1| hypothetical protein CHGG_10415 [Chaetomium globosum CBS 148.51]
gi|88176543|gb|EAQ84011.1| hypothetical protein CHGG_10415 [Chaetomium globosum CBS 148.51]
Length = 1060
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P L ++ + VE ++ W F++R D + ++I+G
Sbjct: 455 QLWTTKYAPTQLNQICGNKANVERIQGWLDKWAMHRKYNFQKRGADGMGGY--RAIIISG 512
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT A+HL A+L +D + + + ++ + + + N +
Sbjct: 513 PPGIGKT-----TAAHLAAKLAGYD-----VLESNASDTRSKKLVENGVSDVLNNTSLMG 562
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
+ + I K +L++D++ +G +A +R L + T +P ++ E
Sbjct: 563 YFAADGKQIDA-GKKKIVLVMDEV---DGMSAGDRGGVGALAKFCKKTEVPLILICNE-- 616
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
+ +++ D A V T I+ + IC +E + + I+ +
Sbjct: 617 ---------RRLPKMKPF--DHVAFDVKFQRPTVDQIRSRIMTICHREGLKMPPQVINAL 665
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM 389
+ SG DIRQ I L + L Q M
Sbjct: 666 IEGSGKDIRQIINMLSTAKLDQTTM 690
>gi|145508475|ref|XP_001440187.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407393|emb|CAK72790.1| unnamed protein product [Paramecium tetraurelia]
Length = 933
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 55/264 (20%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSK----------DKFSTNVLVITGQ 186
QLW KY P + + + + V + W + + G ++ F+ L+++G
Sbjct: 388 QLWTNKYAPSKVSD-CLDQTHVSNIVKWLD-KWGKTQLEICPGSFQSQNFAAKALLLSGP 445
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR- 245
G+GKT +R IA +L EW+ + SKL + EN+V+ ++
Sbjct: 446 PGIGKTTIIRLIAKQKSYQLIEWNAS----------------DVRSKL-QIENYVKHLQD 488
Query: 246 ----RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER-LRQCLLLLVRSTHIPTAVVL 300
R+ + G++ I+L+D++ +G T +R +CL+ +++ T +P +
Sbjct: 489 NTVLRFKDANLISEGKT----IILMDEV---DGMTGSDRGGNKCLIDMIKLTKVPIVCIC 541
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
E K QS L + +D +K I++ L IC+ E + +
Sbjct: 542 NERNK--------QSMRTLANYCLDLQFKKP-----NQVEIQKKLEFICKSENINYDPAE 588
Query: 361 IDLVAQASGGDIRQAITSLQFSSL 384
+ + S DIRQ + LQ +
Sbjct: 589 LKQQIEFSQCDIRQLLNLLQMHKV 612
>gi|448592930|ref|ZP_21651977.1| replication factor C large subunit [Haloferax elongans ATCC
BAA-1513]
gi|445730956|gb|ELZ82543.1| replication factor C large subunit [Haloferax elongans ATCC
BAA-1513]
Length = 487
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 143/368 (38%), Gaps = 70/368 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W G S D ++ G G+GKT+ +
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEW-----GKSWDDHR-EAAIVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W+T +E + + +ER + + ++ G S
Sbjct: 58 AADMG-----WET----------------VELNASDQRTADVIERFAGRAAKNATLAGSS 96
Query: 259 KSSA---ILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
++ ++++D+ +G ++R + LV+S+ P ++ E
Sbjct: 97 AGTSTRQLVILDEADNIHGN--YDRGGASAITKLVKSSSQPIVLIANE------------ 142
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
F ++ L +A R++ ++ SI L ICR+E + ++ +A + GD+R
Sbjct: 143 -FYDMSRGLRNA-CREIEFRDVSARSIVPVLRDICRKEGVEFDSAALERIADMNSGDLRS 200
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
A+ LQ +++ + EE + RD ++ LF L L
Sbjct: 201 AVNDLQ------------AIAEGRDQITEENV-------VMGDRDRSVGLFEFLDAVLKE 241
Query: 435 KRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQ 494
K + L A+ V + L ++ ++ + AR + + WL +R
Sbjct: 242 KSAQEALYT----AYDVDETPDDLTKWIEDKVSLVYEPDELARAYEFLANADRWLGRVRA 297
Query: 495 TMFYNLLR 502
T Y+ R
Sbjct: 298 TQNYSYWR 305
>gi|407042462|gb|EKE41337.1| hypothetical protein ENU1_059290 [Entamoeba nuttalli P19]
Length = 430
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 73/292 (25%)
Query: 148 LEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLY 207
L +L +Q+KKVEEVR W E L K +L++ G G GKT ++ I ++
Sbjct: 16 LSKLVIQKKKVEEVRKWINENLTKPK------ILIVNGPNGCGKTTLIKSIGKEDRIQVK 69
Query: 208 EWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLID 267
E D+ + + + Y+S++ +G G+ + S IL +
Sbjct: 70 EMDSKINDKKGKSKEEMREWVLYSSEMRGL---------FG-------GDWRRSCILFEE 113
Query: 268 DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS------FEELQS 321
+ P E + VR+ +P + E K +S++ ++ +E+L+
Sbjct: 114 ECPS-------EWYVGLFVDYVRNGKMPLIITCNESIK-NSINKYIETNKGNYEYEKLKE 165
Query: 322 ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
V LNPIT IK+ L+ +S I+ +A+ GD+R A+ +
Sbjct: 166 -----SISYVTLNPITMNCIKKCLN--------GMSQGIINSIAEGCHGDLRIALNN--- 209
Query: 382 SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
+E + + F +E +S FH +G+ +H
Sbjct: 210 ---------------------KEIIEINSKFVQVISTNEAISFFHLIGRIIH 240
>gi|118431491|ref|NP_147997.2| replication factor C small subunit [Aeropyrum pernix K1]
gi|150421641|sp|Q9YBS7.3|RFCS_AERPE RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|116062816|dbj|BAA80521.2| replication factor C small subunit [Aeropyrum pernix K1]
Length = 325
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 59/260 (22%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
SS + LW EKY+PRSL+++ Q+ VE ++ + ++R + L+ G G GK
Sbjct: 2 SSVLEMLWVEKYRPRSLDDIVDQKHVVERLKQFVKQR--------NMPHLLFAGPPGTGK 53
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYG-- 248
T +A L Y ++YM LE + + N + E+++ +
Sbjct: 54 TTAAHALAHDLFGENY----------RQYM------LELNASDERGINVIREKVKEFARS 97
Query: 249 STSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTEC 303
T P IP + I+L+D D ++ + A RL + + R I P+ ++
Sbjct: 98 RTPPEIPFK-----IVLLDEADNMTSDAQQALRRLMELYSSVTRFILIANYPSKII---- 148
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
D + S F P++ + L I E E +D
Sbjct: 149 ---DPIQSRCAFFR---------------FQPLSKQDVIERLRYIAENEGVDYEEEALDA 190
Query: 364 VAQASGGDIRQAITSLQFSS 383
+ + S GD+R+AI LQ +S
Sbjct: 191 IYEISEGDMRKAINVLQAAS 210
>gi|401422850|ref|XP_003875912.1| putative replication factor C, subunit 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492152|emb|CBZ27426.1| putative replication factor C, subunit 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 659
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 47/265 (17%)
Query: 120 GLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE--ERLGD-SKDKF 176
G+ NP S +LWA+KYKPRS+ E+ +++AW E +G D
Sbjct: 10 GMANP-------VPSRSELWADKYKPRSIAEMCYP-VCANKLKAWLEGFTPIGSPGDDPK 61
Query: 177 STNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE 236
+ ++++G GVGKT TV +A LG + E++ + K+ E S L
Sbjct: 62 KPHGVLLSGSPGVGKTTTVYVVAHELGCTVVEYNASD-------FRSRKSLKENVSDLVN 114
Query: 237 FENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
F R Y ++ ILL+D++ + E ++ +++ST IP
Sbjct: 115 NRAFSARATSY------------TNVILLMDEVDGCDIGGVGE-----VIEMLKSTSIP- 156
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
+L C D L + + D N + N R L++ E SL
Sbjct: 157 --ILCTCN-----DRWHPKLRSLLNYVEDMRFSHPPCNIVANYLCDRVLAR----EGISL 205
Query: 357 STEQIDLVAQASGGDIRQAITSLQF 381
S + + + SG DIR + +LQ
Sbjct: 206 SKPLLQDIIKKSGSDIRSMLNNLQL 230
>gi|254168911|ref|ZP_04875751.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
gi|197622175|gb|EDY34750.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
Length = 437
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L ++ + + E+ W EE + K S L++ G+ G GKT T R +
Sbjct: 5 WVEKYRPKRLRDIVGNTQAINEILRWAEEW---EEGKPSYKALILVGKPGCGKTTTARAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G + E + ++ G Y + D+ + F+ R G I E+
Sbjct: 62 ANEMGWGVIELNASDVRNEEKIKQIALRGAIYETFTDDGK-FIS--TRKGGRKLIIFDEA 118
Query: 259 KSSAILLIDDL--PVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
D+L V +G ++ ++ ++++ P ++ D T+ ++
Sbjct: 119 --------DNLYEGVKDGDRGG---KKAIVETIKASKQPIILIGN-----DYYSITSGTW 162
Query: 317 EE-LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ L+S+ A+ V + I + L +IC E E + +A SGGD+R A
Sbjct: 163 GKVLKSV-----AKVVKFRAVNRAQIVKVLRRICAAEGIKCQDEVLKYIAGKSGGDLRAA 217
Query: 376 ITSLQ 380
I LQ
Sbjct: 218 INDLQ 222
>gi|14325757|dbj|BAB60660.1| replication factor C subunit [Thermoplasma volcanium GSS1]
Length = 330
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 47/246 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+P+SL E+ + + +++++++ E++ L+ G G GKT+T
Sbjct: 15 EIWTEKYRPKSLSEIYGEDENIQKLKSFVEKK--------ELPHLLFAGSVGTGKTSTAI 66
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A L W+E E + +D N ++ I R PS P
Sbjct: 67 ALAIELFGES----------WKENFIEMNASNE--NGIDVIRNKIKDIAR---IRPSNPL 111
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K IL +D+ A LR+ + + +T A C + + QS
Sbjct: 112 GFK---ILFLDEADQLTAE-AQAALRRTMEMYSETTRFVFA-----CNYSSKIIPPIQS- 161
Query: 317 EELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
R V + P+ + IK+ L++I + E +++ E ++ + + SGGD+R+
Sbjct: 162 ------------RTVVMRFRPVQDEFIKKKLNEIAKNEGFTIDDESMEAMVEVSGGDMRK 209
Query: 375 AITSLQ 380
AI LQ
Sbjct: 210 AINVLQ 215
>gi|159041491|ref|YP_001540743.1| replication factor C large subunit [Caldivirga maquilingensis
IC-167]
gi|157920326|gb|ABW01753.1| AAA ATPase central domain protein [Caldivirga maquilingensis
IC-167]
Length = 418
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 48/251 (19%)
Query: 134 STQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
ST++L W EKY+PRSL+++ Q + + + W + L + + ++++G G GKT
Sbjct: 2 STRRLPWFEKYRPRSLKDIVNQEEVKKTMEDWISKWLSGKEKR----AILLSGPPGTGKT 57
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY---GS 249
V +A G LYE + + +T RIR
Sbjct: 58 TMVHALAYDYGLELYEMNA----------SDVRTA--------------SRIRETIGKAL 93
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
T S+ G ++L D++ N R + + ++ +V+ +P A+
Sbjct: 94 TQGSLFG--FRGKLVLFDEVDGINVRADQGGIYE-IVDIVKEAKVPIAMTAN-------- 142
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
D L+ I V V + P+ N I L +IC E+ + + L+A++S
Sbjct: 143 DPWDPKLRPLRDICV-----VVQVKPLKNRDIIEMLRRICNAEKVKCEEDALRLIAESSM 197
Query: 370 GDIRQAITSLQ 380
GD+R AI LQ
Sbjct: 198 GDMRSAINDLQ 208
>gi|255721575|ref|XP_002545722.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136211|gb|EER35764.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 584
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 71/316 (22%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KY+P+++ ++ + K+++V+ E LG + +L+++G +G K+ T++ +
Sbjct: 76 WIDKYRPKNVSDICINPTKLKQVK---ESLLGMINHTSRSKILILSGPSGSSKSTTIKLL 132
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ L Q+ + K +EY +E E+F++ ++ +
Sbjct: 133 ANELLPH------------QDVFEDSKI-IEY----NESEDFLKFLQE---------CKY 166
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADSVDSTA-- 313
K +I+LI++LP + + RQ L + + P + L+E + D+
Sbjct: 167 KKESIVLIEELPNVYHQDTLIKFRQGLKNWIYQDILNLPPLVICLSELEYNSNGDNEGFR 226
Query: 314 QSFEELQSILVDAGARK----------VALNPITNGSIKRTLSKICRQEQY--SLSTEQI 361
S+ ++ VD K + N I N +K+T++KI + E S+ T ++
Sbjct: 227 NSYSIDNNLTVDTLLSKEISKLDQVENIKFNKIANRFLKKTINKIIKDEHLIRSIGTTRL 286
Query: 362 D--LVAQASGGDIRQAITSLQF--SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFG 417
+ L GDIR I +L+ ++K + + L +
Sbjct: 287 NEFLDEIFKIGDIRSIICNLEMWVKNVKSNSSIGLD---------------------SYL 325
Query: 418 RDETLSLFHALGKFLH 433
R+ +++LFHA+GK ++
Sbjct: 326 RENSINLFHAIGKIIY 341
>gi|448330039|ref|ZP_21519331.1| replication factor C large subunit [Natrinema versiforme JCM 10478]
gi|445612820|gb|ELY66538.1| replication factor C large subunit [Natrinema versiforme JCM 10478]
Length = 504
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E S D+ +V+V G G+GKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDKLEEWAE-----SWDEHRKSVIV-HGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +E++ + S ++ G
Sbjct: 58 AADMG-----W----PV------------MELNASDSRGADVIEKVAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ + P +V E F +
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSRE-VTRVVKDANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L ++ + ++ SI L ICR+E + ++ +A+++ GD+R A+
Sbjct: 143 MSKSLRNS-CETIEFRDVSKRSIVPVLRDICRREGVEFEEDALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|13542322|ref|NP_112010.1| replication factor C small subunit [Thermoplasma volcanium GSS1]
gi|73920753|sp|Q977Z9.2|RFCS_THEVO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
Length = 318
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 47/246 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+P+SL E+ + + +++++++ E++ L+ G G GKT+T
Sbjct: 3 EIWTEKYRPKSLSEIYGEDENIQKLKSFVEKK--------ELPHLLFAGSVGTGKTSTAI 54
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A L W+E E + +D N ++ I R PS P
Sbjct: 55 ALAIELFGES----------WKENFIEMNASNE--NGIDVIRNKIKDIAR---IRPSNPL 99
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K IL +D+ A LR+ + + +T A C + + QS
Sbjct: 100 GFK---ILFLDEADQLTAE-AQAALRRTMEMYSETTRFVFA-----CNYSSKIIPPIQS- 149
Query: 317 EELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
R V + P+ + IK+ L++I + E +++ E ++ + + SGGD+R+
Sbjct: 150 ------------RTVVMRFRPVQDEFIKKKLNEIAKNEGFTIDDESMEAMVEVSGGDMRK 197
Query: 375 AITSLQ 380
AI LQ
Sbjct: 198 AINVLQ 203
>gi|330834114|ref|YP_004408842.1| replication factor C large subunit [Metallosphaera cuprina Ar-4]
gi|329566253|gb|AEB94358.1| replication factor C large subunit [Metallosphaera cuprina Ar-4]
Length = 437
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P SL+E+ Q EE+R+W + + K K + +++ G G+GKT +
Sbjct: 5 WVVKYRPNSLDEIENQEDVKEELRSWIDSWI---KGKPNYKSVLLYGPPGIGKTTMALAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G + E + T + E+ GS S
Sbjct: 62 AKSYGLEIIEMNASD-----------------TRNVTSLRGIAEKASVTGSLF------S 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++ +D++ + F + +L L+ +T P +++ D + E
Sbjct: 99 DRGKLIFLDEIDGIQSKQDFGAI-STVLELISNTKYP--IIMAANNPWDP------NLRE 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + + + + ++R L KIC E+ ID++ +AS GD R AI
Sbjct: 150 LRN-----ATKMIEIKKLGKIPMRRLLKKICANEKVKCEDAAIDVIIEASDGDARYAINM 204
Query: 379 LQ 380
LQ
Sbjct: 205 LQ 206
>gi|302853225|ref|XP_002958129.1| DNA replication factor C complex subunit 1 [Volvox carteri f.
nagariensis]
gi|300256597|gb|EFJ40860.1| DNA replication factor C complex subunit 1 [Volvox carteri f.
nagariensis]
Length = 963
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 49/270 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE--------------RLGDSKDK-FSTNVL 181
QLW +KYKPR+ EL V ++ W E + G SK K S
Sbjct: 365 QLWVDKYKPRNSSELVGNNTLVANLKQWLESWEQVHLRGAAAPTAKGGGSKPKDLSKKAA 424
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+++G G+GKT+ IA G + E M+ T + T D
Sbjct: 425 LLSGPPGIGKTSAAHIIAREAGFEVVE------------MNASDTRNKSTKVSDGIAGKQ 472
Query: 242 ERIRRYGSTSPSIPGESKSSA-----ILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIP 295
+ + ++ ++PG + +L++D++ +G + +R Q L+ ++ + IP
Sbjct: 473 SNVIKEMVSNTTLPGLGDAGGKHRKQLLIMDEV---DGMSGGDRGGIQDLIDTIKRSKIP 529
Query: 296 TAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
++ C D Q L++ ++ RK + I + +S+IC++E
Sbjct: 530 ---IICICN-----DKYNQKLRSLRNHCMELEFRKPTVQ-----QISKRMSEICQKEGLQ 576
Query: 356 LSTEQIDLVAQASGGDIRQAITSLQFSSLK 385
++ +D + +GGD+R + LQ L+
Sbjct: 577 INQATMDALVSGAGGDLRLILGQLQMVRLR 606
>gi|124027779|ref|YP_001013099.1| replication factor C large subunit [Hyperthermus butylicus DSM
5456]
gi|150415659|sp|A2BL93.1|RFCL_HYPBU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|123978473|gb|ABM80754.1| Replication factor C large subunit [Hyperthermus butylicus DSM
5456]
Length = 484
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 47/246 (19%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W KY+P+ +E++ Q + + +R+W + R+ + K + G AGVGKT+
Sbjct: 7 WIIKYRPKRVEDVVDQEEAKKLFLPWLRSWLQGRIPERK------AALFYGPAGVGKTSL 60
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
V A+ G L E + ++ K D +ERI + +T S+
Sbjct: 61 VEAAANEYGLELIEMNAS----------------DFRRKSD-----IERIAKIAATQFSL 99
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G + I+L+D++ +G TA +L L+ T P +V+T + D Q
Sbjct: 100 FGRKRK--IILLDEVDGISG-TADRGGLDAILELINITKHP--IVMT------ANDPWDQ 148
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ L+ + V ++ + + L +IC E E + L+AQ + GD+R
Sbjct: 149 KLKPLRD-----ASLMVPFYRLSERYVVQVLKRICAAENIECEDEALKLIAQRAEGDLRS 203
Query: 375 AITSLQ 380
AI LQ
Sbjct: 204 AINDLQ 209
>gi|254166710|ref|ZP_04873564.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
gi|289596184|ref|YP_003482880.1| ATPase AAA [Aciduliprofundum boonei T469]
gi|197624320|gb|EDY36881.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
gi|289533971|gb|ADD08318.1| AAA ATPase central domain protein [Aciduliprofundum boonei T469]
Length = 437
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 30/245 (12%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L ++ + + E+ W EE K S L++ G+ G GKT T R +
Sbjct: 5 WVEKYRPKRLRDIVGNTQAINEILRWAEEW---EAGKPSYKALILVGKPGCGKTTTARAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G + E + ++ G Y + D+ + F+ R G I E+
Sbjct: 62 ANEMGWGVIELNASDVRNEEKIKQIALRGAIYETFTDDGK-FIS--TRKGGRKLIIFDEA 118
Query: 259 KSSAILLIDDL--PVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
D+L V +G ++ ++ ++++ P ++ D T ++
Sbjct: 119 --------DNLYEGVKDGDRGG---KKAIVETIKASKQPIILIGN-----DYYSITGGTW 162
Query: 317 EE-LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ L+S+ A+ V + I + L +IC E E + +A SGGD+R A
Sbjct: 163 GKVLKSV-----AKVVKFRAVNRAQIVKVLRRICAAEGIKCQDEVLKYIAGKSGGDLRAA 217
Query: 376 ITSLQ 380
I LQ
Sbjct: 218 INDLQ 222
>gi|154421566|ref|XP_001583796.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918040|gb|EAY22810.1| hypothetical protein TVAG_075570 [Trichomonas vaginalis G3]
Length = 460
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 66/321 (20%)
Query: 137 QLWAEKYKPRSLEELAVQ--RKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
QLWAE+Y P +++EL +KK E+R F + ++ ++VI G G GKT
Sbjct: 21 QLWAERYAPTTIDELPFYEVKKKPRELRDLFA--IVFNQQNAYKRIIVIQGPYGSGKTTL 78
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE----NFVERIRRYGST 250
V+ I ++ E+ + M E+ S DE + NF+ + + S
Sbjct: 79 VKTICKIDSIKILEFSPDNEIVSDSQM------FEFDSFEDERKHYRSNFIPTLSSFLSR 132
Query: 251 SP-SIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
+ S ILL+D++ + +G FE LR L + P +
Sbjct: 133 AQLSCVQNFDKRHILLLDNILIPDGCENNFFELLR--LYNISPEFRYPIIWI-------- 182
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
+D T F + I +G ++ + +KR L ++ QE ++ E ++ +
Sbjct: 183 -IDPTQNKFVDDNRI---SGIFRLQIKATPPTVMKRVLKRVGPQEGIRVTNELMEALMAD 238
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQF--GRDETLSLF 425
+ GDIR + QF+ QF G ++L+ F
Sbjct: 239 NIGDIRLLMNHFQFTR-------------------------------QFSSGSYDSLTFF 267
Query: 426 HALGKFLH--NKRETDNLVKM 444
A+G+ L+ KR +N++K+
Sbjct: 268 QAIGEILYQKKKRSPENIIKV 288
>gi|315427366|dbj|BAJ48976.1| replication factor C large subunit [Candidatus Caldiarchaeum
subterraneum]
Length = 409
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 42/248 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
QLW EK++PR + E+ + E V+A+ E G K K S ++ G AGVGKT+ V
Sbjct: 3 QLWTEKHRPRKVSEIVGNK---EAVQAFLEWMAGWEKGKPSKKAALLYGPAGVGKTSLVH 59
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP- 255
A G + E + S EN +ERI S S+
Sbjct: 60 AYAYEKGYEVIETN--------------------ASDFRTREN-IERIVGAASGMASLTM 98
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
G+ K I+L+D++ + R + L ++ TH+P +V +
Sbjct: 99 GQRK---IILVDEVDGIDARADAGAV-TSLADIISKTHVPVVLVAND------------P 142
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
++ + L DA + I S+ L KI E + + + + + S GD+R A
Sbjct: 143 WDPRLAPLRDA-CLMIQFRRIPKPSVAAHLKKIAAAENVRVPEDVLRRIVENSEGDLRSA 201
Query: 376 ITSLQFSS 383
I LQ +S
Sbjct: 202 INDLQMAS 209
>gi|432330746|ref|YP_007248889.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
gi|432137455|gb|AGB02382.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
Length = 331
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 105/258 (40%), Gaps = 45/258 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P + E+ Q + + ++ + ++ L++TG G GK+A V
Sbjct: 2 LWIEKYRPSAFAEIVGQDAVIHHLVSFATTK--------TSPHLILTGPHGTGKSAAVEC 53
Query: 198 IASHLGARLYEWDTPTPTIWQ--EYMHNCKTGLE--------YTSKLDEFENFVERIRRY 247
A L +E +T TI+Q + H K LE Y L NF I+ Y
Sbjct: 54 FARALYGENWEQNT---TIFQTSDIFHQGKALLEQDERYAHIYQKNLSLIANFKYIIKWY 110
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
S P + E K IL+ +D T +Q L ++ T + T +
Sbjct: 111 ASLRP-LDAEFK---ILVFED-----AHTLTRDAQQALRRIMEQTSSTCRFIFTTTNASA 161
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST---EQIDLV 364
+ + A L +PI S+ L +I E +S + +DL+
Sbjct: 162 IIPAIASRCLPL------------FFSPIDQDSMLPYLKRIMGTESSQISPCSEDDLDLI 209
Query: 365 AQASGGDIRQAITSLQFS 382
QASGGD+R+A+ LQ +
Sbjct: 210 VQASGGDLRKAVLLLQVA 227
>gi|397772592|ref|YP_006540138.1| AAA ATPase central domain protein [Natrinema sp. J7-2]
gi|397681685|gb|AFO56062.1| AAA ATPase central domain protein [Natrinema sp. J7-2]
Length = 500
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K +++ W E + D +V+V G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDQLEEWAE-----TWDDHRKSVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A +G W P +E + + +E+I + S ++ G
Sbjct: 58 AGDMG-----W----PV------------MELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ P +V E F E
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSRE-VTRVVKDASQPIVLVANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E ++ +A+++ GD+R A+
Sbjct: 143 MSKSLRNA-CETIEFRDVSKRSIVPVLRDICRREGVEFEEEALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|448340220|ref|ZP_21529193.1| replication factor C large subunit [Natrinema gari JCM 14663]
gi|445630526|gb|ELY83787.1| replication factor C large subunit [Natrinema gari JCM 14663]
Length = 500
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K +++ W E + D +V+V G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDQLEEWAE-----TWDDHRKSVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A +G W P +E + + +E+I + S ++ G
Sbjct: 58 AGDMG-----W----PV------------MELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ P +V E F E
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSRE-VTRVVKDASQPIVLVANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E ++ +A+++ GD+R A+
Sbjct: 143 MSKSLRNA-CETIEFRDVSKRSIVPVLRDICRREGVEFEEEALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|399217484|emb|CCF74371.1| unnamed protein product [Babesia microti strain RI]
Length = 820
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 58/267 (21%)
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
VI G +G GK T++ IA+ L L E+++ Y N +K F NF+
Sbjct: 290 VIQGHSGSGKKTTLQLIANQLAIELLEYNS-----IGNYNENV------ANKTQVFLNFL 338
Query: 242 ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTH--IPTAVV 299
+R+ + S +K++ I D+P T E L++ L L S + + ++
Sbjct: 339 SEVRKKRRLTISKNTSTKATVIY---DIPSTIELKFVESLKEELHYLTTSLNGLVSPFII 395
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLS----------KIC 349
L D++ + FE+ S + + I IK+ L+ KI
Sbjct: 396 LVNDSSRDTI-FLNKIFEDFTS---SPSIAYIKITNINKSKIKKLLTDWLDTRYGSTKIV 451
Query: 350 RQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGH 409
R T+ + ++ + GDIR AI+ LQF S+ NF
Sbjct: 452 RN-----LTQLTNYLSDIAKGDIRFAISMLQFYSIS--------------NFNN------ 486
Query: 410 GGFSIQFGRDETLSLFHALGKFLHNKR 436
+ G+D L+ FH LGK L+NKR
Sbjct: 487 ---YLPLGKDVLLTPFHTLGKILYNKR 510
>gi|398016007|ref|XP_003861192.1| replication factor C, subunit 1, putative [Leishmania donovani]
gi|322499417|emb|CBZ34490.1| replication factor C, subunit 1, putative [Leishmania donovani]
Length = 660
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-----RLGDSKDKFSTNVLV 182
+A+ S +LWA+KYKPRS+ E+ +++AW E GD K + ++
Sbjct: 11 TANPVPSRSELWADKYKPRSIAEMCYP-VCANKLKAWLETFTPIGSPGDDPKK--PHGVL 67
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
++G GVGKT TV +A LG + E++ ++ S+ EN +
Sbjct: 68 LSGSPGVGKTTTVYVVAHELGRTVVEYNAS----------------DFRSRKSLKENVSD 111
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
I + + S S ++ ILL+D++ + E ++ +++ST IP +L
Sbjct: 112 LI---SNRAFSASATSYTNVILLMDEVDGCDIGGVGE-----VIEMLKSTRIP---ILCT 160
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D L + + D N + N R L++ E SLS +
Sbjct: 161 CN-----DRWHPKLRSLLNYVEDMRFSHPPCNIVANYLCDRVLAR----EGISLSKPLLQ 211
Query: 363 LVAQASGGDIRQAITSLQF 381
+ + SG DIR + +LQ
Sbjct: 212 DIIKNSGSDIRNMLNNLQL 230
>gi|257052996|ref|YP_003130829.1| replication factor C small subunit [Halorhabdus utahensis DSM
12940]
gi|256691759|gb|ACV12096.1| Replication factor C [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 50/266 (18%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
++ SA + Q++W EKY+P++LE++A V ERLG + + ++ G
Sbjct: 3 EAESARAGRQEVWIEKYRPQTLEDIAGHEAIV--------ERLGSYVSRNDLSHMLFAGP 54
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIR 245
AGVGKT IA LY D W+E LE + + + V +R++
Sbjct: 55 AGVGKTTAATAIARE----LYGED------WEENF------LELNASDERGIDVVRDRVK 98
Query: 246 RYGSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC 303
+ TS I+ +D D + ++A R + VR +L
Sbjct: 99 SFARTSFG----GYDYRIIFLDEADALTADAQSALRRTMEQFSNNVR-------FIL--- 144
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
S + ++Q + +QS +P+ + +++ + +I ++E ++ + I+
Sbjct: 145 ----SCNYSSQIIDPIQSRCA-----VFRFSPLADEAVEAQIRQIAQEEVIDVTEDGIEA 195
Query: 364 VAQASGGDIRQAITSLQFSSLKQDPM 389
+ +GGD+R+AI LQ +S+ D +
Sbjct: 196 LVYVAGGDMRKAINGLQAASMSGDTV 221
>gi|448385340|ref|ZP_21563846.1| replication factor C large subunit [Haloterrigena thermotolerans
DSM 11522]
gi|445656835|gb|ELZ09667.1| replication factor C large subunit [Haloterrigena thermotolerans
DSM 11522]
Length = 496
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K +++ W E + D +V+V G GVGKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDQLAEWAE-----TWDDHRESVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +E+I S S ++
Sbjct: 58 ANDMG-----W----PV------------MELNASDSRGADVIEKIAGEASKSGTLTAGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ + P ++ E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKDANQPIVLIANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L +CR+E E ++ +A+++ GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDVCRREGIEFEEEALEKIAESTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|268559586|ref|XP_002637784.1| C. briggsae CBR-RFC-1 protein [Caenorhabditis briggsae]
Length = 825
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 47/275 (17%)
Query: 139 WAEKYKPRSLEELAVQ-------RKKVEEVRAWFEERLGD--------------SKDKFS 177
W +KYKP+ L EL Q K +E + W + LG+ S+D
Sbjct: 273 WVDKYKPKRLGELVGQFGDKSPMNKLMEWLNDWAKHNLGEGAKIKKPKPAPWMASQDGTP 332
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
+++G GVGKT LG +L E + + + +K+ E
Sbjct: 333 FKAALLSGSPGVGKTTCAYMACQQLGLKLVEMNA----------SDVRNKKHLEAKIGEL 382
Query: 238 ENFVERIRRYGSTSPSIPGE-SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
+I + +P + SK +L++D++ +G + + L+ +++ + IP
Sbjct: 383 SG-SHQIEEFFGVKKCVPQDNSKVHHVLIMDEVDGMSGNEDRAGISE-LIQIIKESKIP- 439
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ C D L + D K + I+ + IC QE+ +
Sbjct: 440 --IICICN-----DRMHTKIRSLANYCYDLRFPKPRVE-----MIRSRMMTICSQEKLKI 487
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLN 391
+ E +D + + SG D+RQ I +LQ S + +N
Sbjct: 488 TKEDLDEIIELSGHDVRQTIYNLQMRSKSSNAKVN 522
>gi|336122357|ref|YP_004577132.1| Replication factor C large subunit [Methanothermococcus okinawensis
IH1]
gi|334856878|gb|AEH07354.1| Replication factor C large subunit [Methanothermococcus okinawensis
IH1]
Length = 514
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 116/254 (45%), Gaps = 44/254 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+++ E+ K EE++ W E+ L K +++ G G GKT +
Sbjct: 3 WVEKYRPKTMAEVVGNTKIKEELKKWIEDYLQGKPVK----PVLLVGPPGCGKTTLANAL 58
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E L + K ++ + ++++ S S S+ G+
Sbjct: 59 ANDYGFEIIE-------------------LNASDKRNK--DVIKQVVGSASVSKSLSGKR 97
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
A++++D++ +G + + + +L ++++ P ++LT + D S
Sbjct: 98 ---ALIILDEVDGISGNSDRGGVSE-ILKIIKTAKNP--IILT------ANDIYKPSLMS 145
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + V + + SI L +I +E +++ + ++A+ +GGD+R AI
Sbjct: 146 LRN-----ACKIVKIGSVHTNSIVPVLRRIALKEGFNVDDSVLKIIAKHAGGDVRAAIND 200
Query: 379 LQFSSLKQDPMLNL 392
L+ +L D LNL
Sbjct: 201 LESLALGND--LNL 212
>gi|150401783|ref|YP_001325549.1| replication factor C large subunit [Methanococcus aeolicus
Nankai-3]
gi|166225152|sp|A6UWR5.1|RFCL_META3 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|150014486|gb|ABR56937.1| AAA ATPase central domain protein [Methanococcus aeolicus Nankai-3]
Length = 474
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 110/242 (45%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+++ E+ K EE++ W EE L + K +++ G G GKT +
Sbjct: 3 WVEKYRPKTMSEIVGNNKIKEELKNWIEEILHNEIPK----PVLLVGPPGCGKTTLTNAL 58
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G L E L + K ++ + + +I S+S SI G+
Sbjct: 59 ANDYGFELIE-------------------LNASDKRNK--DIIRQIVGGASSSKSITGKR 97
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D++ +G + + + ++ ++++ P ++LT + D S
Sbjct: 98 ---VLIVLDEVDGLSGNSDRGGVSE-IIKIIKNAKNP--IILT------ANDIYKPSLMS 145
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+++ V + + SI L +I +E + + + + ++A+ +GGD+R AI
Sbjct: 146 LRTV-----CNIVKIGSVHTNSIVPVLRRISLKEGFEVDDKILKIIAKHAGGDVRSAIND 200
Query: 379 LQ 380
L+
Sbjct: 201 LE 202
>gi|340522013|gb|EGR52246.1| replication factor C, subunit 1-like protein [Trichoderma reesei
QM6a]
Length = 1028
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 118/288 (40%), Gaps = 42/288 (14%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDS 172
P +++ QL KY P L ++ + +VE+++ W F++R D
Sbjct: 456 PSSTPVKPAAAPTQLLTSKYAPTQLNQICGNKAQVEKIQRWLHNWPKSKKYNFQKRGADG 515
Query: 173 KDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
++I+G G+GKT A+HL A+L +D + + + ++ +
Sbjct: 516 MG--GERAIIISGPPGIGKT-----TAAHLAAKLEGYD-----VLESNASDTRSKKLVEA 563
Query: 233 KLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRS 291
L + N + + S+ E K +L++D++ +G +A +R L R
Sbjct: 564 GLSDVMNNTSLLGFFAGDGKSVHSEKKK-IVLIMDEV---DGMSAGDRGGVGALAKFCRK 619
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
T +P ++ E + +++ D A + N T ++ + IC +
Sbjct: 620 TEVPLILICNE-----------RRLPKMKPF--DHVAFDIRFNRPTVDQVRSRIMTICHR 666
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM-LNLSLSISK 398
E + +D + + S DIRQ I + + L Q M + + S+SK
Sbjct: 667 EGLKMPPPVVDALIEGSNKDIRQIINMIATAKLDQSTMNFDQTKSMSK 714
>gi|341582781|ref|YP_004763273.1| replication factor C large subunit [Thermococcus sp. 4557]
gi|340810439|gb|AEK73596.1| replication factor C large subunit [Thermococcus sp. 4557]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L+E+ Q K +++V+AW L K L++ G G GKT TV +
Sbjct: 7 WVEKYRPRRLDEIVGQTKAIDQVKAWIGAWLEGKPPK--KKALILAGPPGTGKTTTVYAL 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G + E + E E+I RY + ++
Sbjct: 65 AREYGFEVIELNASD------------------------ERTYEKIERYVQAAYTMDILG 100
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K ++ +D+ A R+ L+ R+ + + +A + E
Sbjct: 101 KRRKLIFLDEADNIEPTGA----REIAKLIDRAR--------------NPIIMSANHYWE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + + ++ V +T I + L++I E + E + +A+ +GGD+R A+
Sbjct: 143 VPR-EIRSRSQIVEYKRLTQRDIIKALARILHHEGKRVPKELLYDIAKHAGGDLRAAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|449329772|gb|AGE96041.1| DNA helicase RuvB [Encephalitozoon cuniculi]
Length = 383
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 61/247 (24%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+PR EL + + W + + + +L++ G G GKTA
Sbjct: 5 LWTEKYRPRKYTELVFKGDVHHDALRWLRDYPSNGR------ILLLCGPPGTGKTALAHV 58
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
++S G L E+ N + EY SK+ + + +I G+
Sbjct: 59 LSSVFGMNLVEF-------------NASSDSEYVSKILD-------------SGGTINGK 92
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++L+D++ +G E R L ST + VV+T ++ V
Sbjct: 93 KN---LILVDEI---DGNPLIEVGR-----LASSTRLAHPVVMT----SNEVRLKDVYTL 137
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
E++ +D I+R + +ICR+E + + + + SGGD R I
Sbjct: 138 EIKRPGID--------------EIRRGIERICREEGIRVDNSVLTRMVEDSGGDFRAIIN 183
Query: 378 SLQFSSL 384
LQ SL
Sbjct: 184 HLQMCSL 190
>gi|85691113|ref|XP_965956.1| DNA helicase [Encephalitozoon cuniculi GB-M1]
gi|19068523|emb|CAD24991.1| similarity to DNA HELICASE RUVB [Encephalitozoon cuniculi GB-M1]
Length = 383
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 61/247 (24%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+PR EL + + W + + + +L++ G G GKTA
Sbjct: 5 LWTEKYRPRKYTELVFKGDVHHDALRWLRDYPSNGR------ILLLCGPPGTGKTALAHV 58
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
++S G L E+ N + EY SK+ + + +I G+
Sbjct: 59 LSSVFGMNLVEF-------------NASSDSEYVSKILD-------------SGGTINGK 92
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++L+D++ +G E R L ST + VV+T ++ V
Sbjct: 93 KN---LILVDEI---DGNPLIEVGR-----LASSTRLAHPVVMT----SNEVRLKDVYTL 137
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
E++ +D I+R + +ICR+E + + + + SGGD R I
Sbjct: 138 EIKRPGID--------------EIRRGIERICREEGIRVDNSVLTRMVEDSGGDFRAIIN 183
Query: 378 SLQFSSL 384
LQ SL
Sbjct: 184 HLQMCSL 190
>gi|305663891|ref|YP_003860179.1| replication factor C small subunit [Ignisphaera aggregans DSM
17230]
gi|304378460|gb|ADM28299.1| replication factor C small subunit [Ignisphaera aggregans DSM
17230]
Length = 323
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 99/255 (38%), Gaps = 61/255 (23%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+P++L E+ Q + V + + EE+ + L+ G G GKT
Sbjct: 4 LWAEKYRPKTLREIVNQEEIVNRLMKFVEEK--------NMPHLLFAGPPGTGKTTA--- 52
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLE-----YTSKLDEFENFVERIRRYGSTSP 252
A L LY + W+ Y+ E SK+ EF
Sbjct: 53 -ALALAHDLYGDE------WRRYLLELNASDERGIAVIRSKVKEF------------ARS 93
Query: 253 SIPGESKSSAILLID-DLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADS 308
+PG+ ++L + D + + A R+ + + R I P+ ++ D
Sbjct: 94 KLPGDIPFKIVILDEADNMTADAQQALRRIMEMYVETTRFILIANYPSKII-------DP 146
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+ S SF P+ + L IC QE+ + +D++ + S
Sbjct: 147 IQSRCASFR---------------FTPLKREDVTSRLRWICEQEKVKCDEDGLDVIYELS 191
Query: 369 GGDIRQAITSLQFSS 383
GGD+R+AI LQ +S
Sbjct: 192 GGDMRKAINILQSAS 206
>gi|71755451|ref|XP_828640.1| replication factor C subunit 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834026|gb|EAN79528.1| replication factor C, subunit 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261334525|emb|CBH17519.1| replication factor C large subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 587
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
S+ +S WAEKYKP+++ ++ +++ W EE +S +++G
Sbjct: 4 SSPSSIEVPHSWAEKYKPKTIAQMCYP-VTANKLKQWMEEFEANSSKMRGA---LLSGPP 59
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
GVGKT +V +AS LG + E++ + L E + V R +
Sbjct: 60 GVGKTTSVYVVASELGRVVVEYNA--------------SDFRSRKSLRENVSTVVNNRTF 105
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
+TS S ++ +LL+D++ + E ++ ++++T++P ++ C
Sbjct: 106 SNTS-----SSYANIVLLMDEVDGCDIGGVGE-----VIQMIKNTNVP---IICTCN--- 149
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
D L + + D A + N + N + L++ E SLS + + + Q
Sbjct: 150 --DRWHPKLRSLLNHVEDIRAGRPPCNIVANYLCDKVLAR----EGISLSKQLLQDIIQR 203
Query: 368 SGGDIRQAITSLQF-----SSLKQDPMLNLSLSISK 398
SG DIR + +LQ +SL+Q + +L +K
Sbjct: 204 SGSDIRSMLNNLQMWCINQTSLQQKKLAECALQSAK 239
>gi|392576894|gb|EIW70024.1| hypothetical protein TREMEDRAFT_30228, partial [Tremella
mesenterica DSM 1558]
Length = 614
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 126/342 (36%), Gaps = 57/342 (16%)
Query: 150 ELAVQRKKVEEVRAWFEERL---------------GDSKDKFST--NVLVITGQAGVGKT 192
ELA + ++ +V+ W E L SK++ +L++TG AG GKT
Sbjct: 1 ELAPGKARIAKVKNWLSEALYGYPADVVLPPAGMSNQSKERIRKYKRILLLTGPAGAGKT 60
Query: 193 ATVRQIASHLGARLYEWDTPTP--TIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
T+R +A +G L EW ++ H +L + + GS
Sbjct: 61 TTIRVLAKEMGVELVEWGDSMDEYSVGLGTYHRSHLPPSSLLRLCPPSSSLSSRPDPGSR 120
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKAD 307
SP + IL + LP E L+ ++ + P +V +E G
Sbjct: 121 SPF---NAFRPRILFMSSLPNLTHLPTREAFHSALVTFCKTFTLDSCPLVIVHSEAGSGG 177
Query: 308 SVDSTAQSFEEL----------QSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
+ + E + +L +++ P+ I + LS++ Q +
Sbjct: 178 RAEESWMDREGGGREGAVSVVGKEVLGSPYCQEIDFIPLAPTFITKALSRVLDQAIPDVK 237
Query: 358 TE----QIDLVAQASGGDIRQAITSLQF---------SSLKQDPMLNLSLSISKPNFPEE 404
+ L+A ++ GD+R AI SLQ + ++ ++ SK
Sbjct: 238 QRPPHSAVQLIALSANGDLRSAINSLQMLCGQNTRLTGNKRKRKNRDIGSGSSKTGRGSR 297
Query: 405 KADG---------HGGFSIQFGRDETLSLFHALGKFLHNKRE 437
G I R+ +L+LFH+LGK +NKR+
Sbjct: 298 GGKGARIDVSDDLRAVLDIVAKRENSLNLFHSLGKVFYNKRQ 339
>gi|313125638|ref|YP_004035908.1| replication factor c large subunit [Halogeometricum borinquense DSM
11551]
gi|448285477|ref|ZP_21476720.1| replication factor C large subunit [Halogeometricum borinquense DSM
11551]
gi|312292003|gb|ADQ66463.1| replication factor C large subunit [Halogeometricum borinquense DSM
11551]
gi|445576733|gb|ELY31183.1| replication factor C large subunit [Halogeometricum borinquense DSM
11551]
Length = 487
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 44/256 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W G + D V V+ G GVGKT+ +
Sbjct: 4 WTEKYRPSTLAEVRGNNKARDALAEW-----GKTWDDHREAV-VLHGAPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR----YGSTSPSI 254
A+ +G W+ N D E F R G+++
Sbjct: 58 ANDMG-------------WETVELNASD----QRTADVIERFAGRAAMNTTLAGASAGDA 100
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQ-CLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
GE + ++++D+ +G ++R + LV+ ++ P ++ E
Sbjct: 101 NGEREGRQLVIMDEADNIHGN--YDRGGAGAITRLVKKSNQPIVLIANE----------- 147
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
+ ++ S L A R++ ++ SI L I R+E ++ +D +A+ + GD+R
Sbjct: 148 --YYDMSSGLRSA-TREIEFRDVSARSIVPVLRDILRKEGIEFDSDALDRIAETNSGDLR 204
Query: 374 QAITSLQFSSLKQDPM 389
A+ LQ ++ D +
Sbjct: 205 SAVKDLQAAADGADRL 220
>gi|320100774|ref|YP_004176366.1| replication factor C large subunit [Desulfurococcus mucosus DSM
2162]
gi|319753126|gb|ADV64884.1| replication factor C large subunit [Desulfurococcus mucosus DSM
2162]
Length = 425
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 41/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+PR+LEE Q + E++ AW E K ++ G G GKT+ V +
Sbjct: 8 WVIKYRPRTLEEFEDQEEAKEKLIAWLESW---EKGVPGKKAALLHGPPGCGKTSLVEAV 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G +L+E + + K D ++RI + S S ++ G
Sbjct: 65 ARSKGYQLFEMNAS----------------DARRKED-----IDRIVKLASRSGALTGSR 103
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+L+D++ + R + + L+ ++++T P +++T + + +Q+
Sbjct: 104 K---IILLDEVDGMDPRADAGGI-EALVEVIKATANP--IIMT------ANNPYSQALRP 151
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+ + + + ++ + + L KIC E+ E + +A+ S GD+R AI
Sbjct: 152 LREL-----SEVIGFKRLSESVVVKVLKKICGAEKLFCEDEALREIARRSEGDLRSAIND 206
Query: 379 LQ 380
L+
Sbjct: 207 LE 208
>gi|448322580|ref|ZP_21512050.1| replication factor C large subunit [Natronococcus amylolyticus DSM
10524]
gi|445601338|gb|ELY55327.1| replication factor C large subunit [Natronococcus amylolyticus DSM
10524]
Length = 497
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K ++++ W E S D V+V G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDQLKEWAE-----SWDDHRKAVIV-HGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ER+ + S ++
Sbjct: 58 ANDMG-----W----PV------------MELNASDSRGADVIERVAGEAAKSGTLTAGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ P ++ E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKDASQPMVLIANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A V ++ SI L ICR+E E ++ +A ++ GD+R A+
Sbjct: 143 MSQSLRNA-CETVEFRDVSKRSIVPVLRDICRREGVEFEEEALEQIADSTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|403337686|gb|EJY68066.1| BRCT domain containing protein [Oxytricha trifallax]
Length = 1292
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 117/265 (44%), Gaps = 36/265 (13%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE---------------RLGDS-KD--KFS 177
+++W + Y P+S+ +L + ++++ W ++ R G S +D K +
Sbjct: 631 KEMWTDLYAPQSVRDLVGNQGVIDQLYEWLKDWDDVHVRGNKKQVHPRRGQSWQDLPKVN 690
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
++++G G+GKT++ R + LG + E + + T + ++N L +D F
Sbjct: 691 ATAVLLSGPPGIGKTSSARIVCKQLGFEVLETNA-SDTRNKNSINNMLQVLSSNKSIDYF 749
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPT 296
+ ++ S G+ +++++D++ +G A +R Q L+ +++ T P
Sbjct: 750 SVAGIKKQQANPVSSDSAGQQTKKSVIIMDEV---DGVGAGDRGGLQALIQVIKLTKTPI 806
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
+ + + +LQS+L + N + I + + IC+ E +
Sbjct: 807 ICICND-----------RQNRKLQSLL--NYCYDLKFNRPSQNEIAKRVQLICQSEGLQI 853
Query: 357 STEQIDLVAQASGGDIRQAITSLQF 381
I+ + ++SG DIRQ + LQ
Sbjct: 854 DNNTINKIIESSGSDIRQIVNILQM 878
>gi|371945111|gb|AEX62932.1| putative replication factor C small subunit [Moumouvirus Monve]
Length = 346
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 43/269 (15%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR ++++ ++ ++ + + + + L+ G +G GKT+T++
Sbjct: 21 WTEKYRPRDIDQIISHKQITRSLKNFIKSK--------TLPHLLFFGPSGSGKTSTIKCC 72
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI--PG 256
A+ L + Y+ NC S E +I+ + S SI P
Sbjct: 73 AAKL--------------YGSYL-NCMILELNASNERGIETVRTKIKNFVSNKNSIFLPP 117
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
E ++ L+I D + A LRQ + + T C D ++ QS
Sbjct: 118 ELRNIFKLVILDEIDSMTVEAQGMLRQTI-----EKNSSTTRFCLICNDIDKINLALQSR 172
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L +P+ N + + L IC E ST ID V S GD+R AI
Sbjct: 173 CAL-----------FRFSPLNNNEMHKRLKDICDIENVKYSTGVIDAVINISKGDMRSAI 221
Query: 377 TSLQFSSLKQDPMLNLS--LSISKPNFPE 403
+LQ +L + ++ ++ IS PE
Sbjct: 222 NTLQHVNLTVNDLITVNDVYKISGHCMPE 250
>gi|294932355|ref|XP_002780231.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
gi|239890153|gb|EER12026.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
Length = 829
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 106/273 (38%), Gaps = 49/273 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE---------------RLGD 171
D +S LW EKYKPR+L++L + ++R W ++ R
Sbjct: 279 DGSSGGDVKGILWTEKYKPRTLKDLVGNNAPITKLRTWLQDWEKVHVHGQKKPVTFRGRG 338
Query: 172 SKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT 231
+ + ++++G G+GKT R +A LG E++ + + + N +GL
Sbjct: 339 VPENVNAKAVLVSGPPGIGKTTACRLVARELGYMPMEFNA-SDQRNKATVDNLASGLATN 397
Query: 232 SKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS 291
+ + + + K L++D+ V L+ L++
Sbjct: 398 AVIGQNYSL------------------KQKPCLVMDE--VDGMSGGDRGGGAALIQLIKK 437
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
+ +P V+ C D + L + D + T + ++ I +
Sbjct: 438 SKMP---VMCICN-----DRMSTKVRSLANSCYD-----IRFTKPTGAQCSQRVAAIAKS 484
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSL 384
E + T+ + ++A+ GGD+RQ I +L+ SL
Sbjct: 485 EGVHVDTDAMAMLAEQLGGDMRQIINNLEMLSL 517
>gi|221052935|ref|XP_002257842.1| replication factor C subunit 1 [Plasmodium knowlesi strain H]
gi|193807674|emb|CAQ38378.1| replication factor C subunit 1, putative [Plasmodium knowlesi
strain H]
Length = 900
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 107/264 (40%), Gaps = 50/264 (18%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFE---------------ERLGDSKDKFSTNV 180
QLW EKY+PRSL EL + V +++ W + + +
Sbjct: 348 NQLWVEKYRPRSLNELVGNTQNVLKLKNWLASWDDVCIKGLKKQVTKTFRGVYENVNARC 407
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
+++G AG+GKT T + +A G + E++ K +E S++
Sbjct: 408 ALLSGSAGIGKTTTAKIVAESSGYNVIEFNASD--------ERNKAAVEKISEM------ 453
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVV 299
G + SI + +++D++ +G ++ ++ +L L+ T P +
Sbjct: 454 ----ATGGYSIASIKSRKLTKTCIIMDEV---DGMSSGDKGGSAAILKLIEKTKCPIICI 506
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
C D L + D +P N + R L +IC++E ++
Sbjct: 507 ---CN-----DRQNSKMRTLANKCYDLK----FTSPNKNSVVNRLL-EICKKEDITMEPN 553
Query: 360 QIDLVAQASGGDIRQAITSLQFSS 383
++L+ +++ GD+RQ + +LQ S
Sbjct: 554 ALELLWESTNGDMRQMLNALQLLS 577
>gi|70606692|ref|YP_255562.1| replication factor C large subunit [Sulfolobus acidocaldarius DSM
639]
gi|449066915|ref|YP_007433997.1| replication factor C large subunit [Sulfolobus acidocaldarius N8]
gi|449069187|ref|YP_007436268.1| replication factor C large subunit [Sulfolobus acidocaldarius
Ron12/I]
gi|73914010|sp|Q4JAB1.1|RFCL_SULAC RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|68567340|gb|AAY80269.1| replication factor C [Sulfolobus acidocaldarius DSM 639]
gi|449035423|gb|AGE70849.1| replication factor C large subunit [Sulfolobus acidocaldarius N8]
gi|449037695|gb|AGE73120.1| replication factor C large subunit [Sulfolobus acidocaldarius
Ron12/I]
Length = 437
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P+SL+E+ Q + EE++ W E L + +++ G GVGKT +
Sbjct: 5 WFLKYRPKSLQEVENQDEVKEELKKWIESWLNGEP---TAKAVLLYGPPGVGKTTLAEAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L E + + L + ++ ER S S S+ G
Sbjct: 62 ARDYKLELLEMNASD-----------------SRNLRDIKDVAER----ASISGSLFG-- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
I+L+D++ R + +L L+ T P V+LT D D + +S
Sbjct: 99 IKGKIILLDEIDGIYSRADAGAI-PAILELIEKTKYP--VILTAN---DPWDPSLRSLRN 152
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + +KR L +IC +E+ E +D + + S GD R I
Sbjct: 153 --------AVKMIELKRLGKYPLKRLLKRICEKEKIVCIDEALDHIIEQSEGDARYCINM 204
Query: 379 LQ 380
LQ
Sbjct: 205 LQ 206
>gi|168050549|ref|XP_001777721.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670941|gb|EDQ57501.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 850
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 121/264 (45%), Gaps = 36/264 (13%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---EERLGDS----KDKFSTN---VLV 182
+S + W K++P+S+ ++ + V++V+ W E+ G++ K ST+ ++
Sbjct: 283 ASGTESWPYKHRPQSINDIIGNQSIVKQVQDWLVQWEKHHGNAVKGKKGSSSTSQKKAVL 342
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
++G G+GKT T R + LG E + + N K G+ + E
Sbjct: 343 LSGPPGIGKTTTARLVCDLLGYEALEVNASD--TRGKSDSNVKNGIGGKTSNTIKEMISN 400
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLT 301
R +GS +S+ A+L++D++ +G + +R L+L ++S+HIP ++
Sbjct: 401 RSLGFGS-------KSERKAVLIMDEV---DGMSGGDRGGVADLILSIKSSHIP---IIC 447
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D +Q + L + + RK T + + L +I + E + +
Sbjct: 448 ICN-----DKYSQKLKSLINYCLPLPFRKP-----TKQQMAKRLQQIAKSEGLEVDDLAL 497
Query: 362 DLVAQASGGDIRQAITSLQFSSLK 385
+ +++ GD+R A+ LQ+ SL+
Sbjct: 498 EELSERVNGDMRMALNQLQYMSLR 521
>gi|353236695|emb|CCA68684.1| related to replication factor C protein [Piriformospora indica DSM
11827]
Length = 937
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 48/273 (17%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITG 185
+ QLW KY P++L ++ + VE+V+ W + K F L+I G
Sbjct: 360 SSQLWTTKYAPQNLSQICGNKANVEKVQLWLHDWPQSRKSGFKYGGKNAINGYRALLIYG 419
Query: 186 QAGVGKTATVRQIASHLGARLYEW--------DTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
G+GKT T +HL A+L + D + + + H T + TS LD +
Sbjct: 420 PPGIGKTTT-----AHLCAKLEGFTPIELNASDARSKKLIEACRHPNATNINNTS-LDGW 473
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL-LLVRSTHIPT 296
+ +G + S E +L++D++ +G +A +R L L++ T +P
Sbjct: 474 MS-------HGQVN-SAGIEITDRTVLIMDEV---DGMSAGDRGGVVALKALIKKTQVPI 522
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
+ D AQ + L I A + T IK ++ IC +E+ ++
Sbjct: 523 ICIAN--------DGQAQKLKPLMGI-----AASIHFTKPTAAQIKSRIASICYKEKLNI 569
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
I+ + + DIRQ + L L + M
Sbjct: 570 PPNVIEQLIAGAQSDIRQVLNMLSTWKLSKGSM 602
>gi|332796205|ref|YP_004457705.1| AAA ATPase [Acidianus hospitalis W1]
gi|332693940|gb|AEE93407.1| AAA ATPase central domain protein [Acidianus hospitalis W1]
Length = 450
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P+SL ++ Q +E++ W E L K L++ G G GKT + +
Sbjct: 5 WIIKYRPKSLNDVENQDDVKQELKRWIESWLSG---KPENKALLLYGPPGTGKTTLAQAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G L E + + L+ +N +R + S S+ G
Sbjct: 62 AHDYGLELLEMNASD-----------------SRNLEAIKNIAQR----AAVSGSLFG-- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++ +D++ N R + + LV+ T P + D S E
Sbjct: 99 TKGKLIFLDEVDGINARQDMGAI-PAIAELVQKTRYPVLLAAN--------DPWDPSLRE 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+++ A+ V + + ++++ L KIC E+ + +D + + S GD R AI
Sbjct: 150 LRNL-----AKLVEVKKLGKYALRKILGKICTSEKLQCDDDALDEIIEISDGDARYAINL 204
Query: 379 LQFSS 383
L+ ++
Sbjct: 205 LEATA 209
>gi|67472098|ref|XP_651913.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468704|gb|EAL46527.1| hypothetical protein EHI_082050 [Entamoeba histolytica HM-1:IMSS]
gi|449707917|gb|EMD47482.1| Hypothetical protein EHI5A_196300 [Entamoeba histolytica KU27]
Length = 430
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 116/292 (39%), Gaps = 73/292 (25%)
Query: 148 LEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLY 207
L +L +Q+KKVEEVR W E L K +L++ G G GKT ++ I ++
Sbjct: 16 LSKLVIQKKKVEEVRKWINENLTKPK------ILIVNGPNGCGKTTLIKSIGKEDRIQVK 69
Query: 208 EWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLID 267
E D+ + + + Y+S++ +G G+ + S IL +
Sbjct: 70 EMDSKINDKKGKSKEEMREWVLYSSEMRGL---------FG-------GDWRRSCILFEE 113
Query: 268 DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS------FEELQS 321
+ + + + + VR+ +P + E K +S++ ++ +E+L+
Sbjct: 114 E-------CSSDWYVELFVDYVRNGKMPLIITCNESIK-NSINKYIETNKGNYEYEKLKE 165
Query: 322 ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
V LNPIT IK+ L+ +S I+ +A+ GD+R A+ +
Sbjct: 166 -----SISYVTLNPITMNCIKKCLN--------GMSQGIINSIAEGCHGDLRIALNN--- 209
Query: 382 SSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLH 433
+E + + F +E +S FH +G+ +H
Sbjct: 210 ---------------------KEIIEINSKFVQVISTNEAISFFHLIGRIIH 240
>gi|320586272|gb|EFW98951.1| DNA replication factor c subunit [Grosmannia clavigera kw1407]
Length = 1507
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 37/268 (13%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLV 182
+ + QQLW KY P L ++ + +VE + +W + K F T ++
Sbjct: 913 TPTAQQLWTTKYAPTQLNQICGNKAQVERIASWLKNWPKAKKYDFMTKGADGLGASRAII 972
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
I+G G+GKT A+HL A L + D + + + ++ S + + +
Sbjct: 973 ISGPPGIGKT-----TAAHLAANLADHD-----VIETNASDTRSKKLVESGIGDTMDNTS 1022
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
+ + + +K + +L++D++ +G +A +R L + T +P ++
Sbjct: 1023 LLGFFAPDGKKV-DTTKKNVVLIMDEV---DGMSAGDRGGIGALAKFCKKTEVPLILICN 1078
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D A + N T I+ + IC +E L +
Sbjct: 1079 E-----------RRLPKMRPF--DHVAFDLRFNRPTVDQIRSRVMTICHREGLKLPPTVV 1125
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPM 389
D + + + DIRQ I L + L Q M
Sbjct: 1126 DALIEGTNKDIRQIINMLSTAKLDQSTM 1153
>gi|312136660|ref|YP_004003997.1| ATPase AAA [Methanothermus fervidus DSM 2088]
gi|311224379|gb|ADP77235.1| AAA ATPase [Methanothermus fervidus DSM 2088]
Length = 405
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 101/250 (40%), Gaps = 58/250 (23%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ +E RK VEEVR W + D K+ L++ G GVGKTA + I
Sbjct: 3 WVEKYRPKDFDEFIGNRKVVEEVRKW----IRDWKEGKPQPPLLLVGPTGVGKTALAQII 58
Query: 199 ASHL--GARLYEWDTPTPTIWQEYM-HNCKTG-----LEYTSKLDEFENFVERIRRYGST 250
++ L D + +I + + K+G E LDE +N
Sbjct: 59 SNKFSDSISLNASDKRSYSILMRIVGESSKSGSLFGKHERVIVLDEVDNI---------- 108
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
SI +SAIL I D+ S H +VLT A+ +
Sbjct: 109 -HSIEDRGGASAILKIIDI---------------------SKH---PIVLT----ANDIY 139
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
+ L I K+ P SI L +ICR+E+ + + +A+ + G
Sbjct: 140 T-----RHLARIRKKCKVLKLRRPPAR--SIVALLGRICRKEKIKFNRSVLMEIAKKASG 192
Query: 371 DIRQAITSLQ 380
D+RQAI L+
Sbjct: 193 DVRQAINMLE 202
>gi|254571541|ref|XP_002492880.1| Subunit of a complex with Ctf8p that shares some subunits with
Replication Factor C [Komagataella pastoris GS115]
gi|238032678|emb|CAY70701.1| Subunit of a complex with Ctf8p that shares some subunits with
Replication Factor C [Komagataella pastoris GS115]
gi|328353107|emb|CCA39505.1| Chromosome transmission fidelity protein 18 homolog [Komagataella
pastoris CBS 7435]
Length = 747
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 131/339 (38%), Gaps = 57/339 (16%)
Query: 72 LVNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKE---NVGRFLTPSRFEGLVNPDHDS 128
++N ++ L L + R L +N +E+ K + + +V P
Sbjct: 57 VINQEKTLHLQNGRRISLKRRENHALEIEDIVKNKSFDVGIKDIYQSMELQSMVEPTQQP 116
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF--------------EERLGDSKD 174
+ ++ +LWAEK++PR+ E+A + + W EE D
Sbjct: 117 KRSKRTSAELWAEKWRPRNFLEVAGNERTNRHLLNWLRKWSKAAHGEPLPSEEESVDPLQ 176
Query: 175 KFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPT----PTIWQEYMHNCKTGLEY 230
+ +L+I G G GKT IA LG + E + P + +E +H T +
Sbjct: 177 RPQKKILLIHGPPGAGKTTVAHIIAKQLGYEVAEINASDERAGPEV-REKVHTVLTTQSF 235
Query: 231 TSK-----LDEFENFVERIRRYGSTS---PSIPGESKSSAILLIDDLPVTNGRTAFERLR 282
+ K DE + E +G + ++KS+ L +L + RLR
Sbjct: 236 SKKPVCLIADEVDGSSE----HGFIKVLLDIVNNDAKSTKSLHYSNL----SKDKKARLR 287
Query: 283 QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
LL T ++ C D +S ++L+++ RK ++ S+K
Sbjct: 288 SKLL---------TRPIIAICN-----DVYTRSLDKLRAVSEIVAFRKSSIR-----SVK 328
Query: 343 RTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
L IC E+ +S ++ + + D+R ++ LQF
Sbjct: 329 ERLKLICDAEKIDISERNLNAIIDITDCDLRSSLNLLQF 367
>gi|156093631|ref|XP_001612854.1| replication factor C subunit 1 [Plasmodium vivax Sal-1]
gi|148801728|gb|EDL43127.1| replication factor C subunit 1, putative [Plasmodium vivax]
Length = 945
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 50/263 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFE---------------ERLGDSKDKFSTNVL 181
QLW EKY+P++L EL + V +++ W + + +
Sbjct: 394 QLWVEKYRPKNLNELVGNNQNVLKLKNWLASWDDVCIKGLKKQVTKTFRGVYENVNARCA 453
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+++G AG+GKT T + +A G + E++ K +E S++
Sbjct: 454 LLSGSAGIGKTTTAKIVAESSGYSVIEFNASD--------ERNKAAVEKISEM------- 498
Query: 242 ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVL 300
G + SI + +++D++ +G ++ ++ +L L+ T P +
Sbjct: 499 ---ATGGYSIASIKSRKLTKTCIIMDEV---DGMSSGDKGGSAAILKLIEKTKCPIICIC 552
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
+ A + + A +L+ P N +KR L +IC+QE +
Sbjct: 553 NDRQNA-KMRTLANKCYDLK-----------FTTPNKNSVVKRLL-EICKQEDIMMEPNA 599
Query: 361 IDLVAQASGGDIRQAITSLQFSS 383
++L+ +++ GD+RQ + +LQ S
Sbjct: 600 LELLWESTNGDLRQMLNALQLLS 622
>gi|282163105|ref|YP_003355490.1| replication factor C large subunit [Methanocella paludicola SANAE]
gi|282155419|dbj|BAI60507.1| replication factor C large subunit [Methanocella paludicola SANAE]
Length = 506
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 46/266 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P SL + V+ +R W E G K ++ G G+GKT+ +
Sbjct: 9 WAEKYRPVSLSGVLGNDAAVKALRKW-AETFGSGK-----KAAILYGGPGIGKTSAALAL 62
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A +G WD Y+ + +++ + +G T+
Sbjct: 63 AHDMG-----WD---------YIEMNASDQRTKDAINKVAGSASKTGTFGGTN------- 101
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+L++D+ +G ++R + ++ ++++T+ P ++ A F
Sbjct: 102 -ERRLLILDEADNLHGN--YDRGGEAAIINVIKNTNQPIILI-------------ANDFY 145
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
L L DA A + + + SI + L KIC E E + +A+ + D+R AI
Sbjct: 146 ALSKPLRDA-AEPIQFRALLSTSIVKALKKICAAENIKCQPEALMKIAERT-NDMRSAIN 203
Query: 378 SLQFSSLKQDPMLNLSLSISKPNFPE 403
LQ +++ ++ + +S + + PE
Sbjct: 204 DLQAAAMGREEVTLADVSTGERDVPE 229
>gi|403351956|gb|EJY75481.1| Replication factor C subunit protein, putative [Oxytricha
trifallax]
Length = 1043
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 112/279 (40%), Gaps = 62/279 (22%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEE----VRAWFEERLGDSKDKFST-------------- 178
QLW++KY P + EL ++++E+ +R W + L K + T
Sbjct: 504 QLWSDKYTPTCISELVGNQREIEQFYDWLRDWEDVHLKGHKKELYTRCNNKYQDIPKQNA 563
Query: 179 NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
+I+G G+GK++TVR +A LG L +E S + +
Sbjct: 564 KACIISGPPGIGKSSTVRVVAKELGYLL---------------------IENNSSDNRQK 602
Query: 239 NFVERIRRYGSTSPSI-------PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS 291
+E + + +TS SI G K + I+L+D++ +G +R L+ V S
Sbjct: 603 KTIENLLKDSTTSSSINRFQTDQTGHLKRT-IILMDEI---DGMCFKDRGGMNALIKVIS 658
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
T + V + G+A + + S EL+ N ++ I + + + +
Sbjct: 659 TTMIPIVCIANDGRARKLSNLLNSCYELR------------FNKPSSEDIMKRIRVLSQH 706
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPML 390
E++S+ + SG DIR + LQ D L
Sbjct: 707 EKFSIDPNALSRFFDQSGFDIRHILNMLQMHRTTSDKFL 745
>gi|367035834|ref|XP_003667199.1| hypothetical protein MYCTH_2312776 [Myceliophthora thermophila ATCC
42464]
gi|347014472|gb|AEO61954.1| hypothetical protein MYCTH_2312776 [Myceliophthora thermophila ATCC
42464]
Length = 945
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 45/267 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P L ++ + VE ++ W F++R D + ++I+G
Sbjct: 464 QLWTTKYAPTQLSQICGNKANVERIQNWLRKWPISRKYDFQKRGADGMGGY--RAIIISG 521
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT A+HL A+L +D + + + ++ + + N +
Sbjct: 522 PPGIGKT-----TAAHLVAKLEGYD-----VLESNASDTRSKKLVEGGVSDVLNNTSLMG 571
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE-- 302
+ + SK +L++D++ +G +A +R L + T +P ++ E
Sbjct: 572 YFAGDGKKV-DVSKKKIVLVMDEV---DGMSAGDRGGVGALAKFCKKTEVPLILICNERR 627
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
K D A + Q VD I+ + IC +E + + I+
Sbjct: 628 LPKMKPFDHVAFDI-KFQRPTVD--------------QIRSRIMTICHREGLKIPPQVIN 672
Query: 363 LVAQASGGDIRQAITSLQFSSLKQDPM 389
+ + SG DIRQ I L + L Q M
Sbjct: 673 ALIEGSGKDIRQIINMLSTAKLDQTTM 699
>gi|16082630|ref|NP_394950.1| replication factor C small subunit [Thermoplasma acidophilum DSM
1728]
gi|73920752|sp|Q9HI47.2|RFCS_THEAC RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
Length = 318
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+P+SL E+ + + +++++++ E++ L+ G G GKT+T
Sbjct: 3 EIWTEKYRPKSLSEIYGEDENIQKLKSFVEKK--------EIPHLLFAGSVGTGKTSTAI 54
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A L D+ W+E M E + +D N ++ I R PS P
Sbjct: 55 ALAIELFG-----DS-----WKENMVEMNASNE--NGIDVIRNKIKDIAR---IKPSNPL 99
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K IL +D+ A LR+ + + +T + C + + QS
Sbjct: 100 GFK---ILFLDEADQLTAE-AQAALRRTMEIYSETTRF-----IFSCNYSSKIIPPIQS- 149
Query: 317 EELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
R V + P+ + I R L +I + E + + E + + + S GD+R+
Sbjct: 150 ------------RTVVMRFRPVPDEYISRKLQEIAKNEGFQIDEESMHALVEVSAGDMRK 197
Query: 375 AITSLQ 380
AI LQ
Sbjct: 198 AINVLQ 203
>gi|154150617|ref|YP_001404235.1| replication factor C large subunit [Methanoregula boonei 6A8]
gi|166225153|sp|A7I781.1|RFCL_METB6 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|153999169|gb|ABS55592.1| AAA ATPase, central domain protein [Methanoregula boonei 6A8]
Length = 481
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 124/312 (39%), Gaps = 70/312 (22%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P L ++ V ++ W + SK L++ G+ G+GKT++V +
Sbjct: 3 WAEKYRPEHLADIVGNTSAVRQMADWAKTWTARSKP------LLLYGKPGIGKTSSVYAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A R WD +E + +ERI GST+ S+ G +
Sbjct: 57 A-----RDMNWDV----------------IELNASDQRTAAVIERIAGAGSTTASLTGSA 95
Query: 259 KSSAIL-LIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ I+ D+L T R + + +C +++ P ++ +
Sbjct: 96 RKLIIMDEADNLQGTADRGGAKAILEC----IKNARQPIVLIAND--------------- 136
Query: 318 ELQSILVDAGAR--KVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
L + + R V + SI L IC E+ + S + +A+++ GD+R A
Sbjct: 137 -LYGLAAELRLRCEPVQFRALPARSIAPRLKYICSSEKIACSESAVHEIAESAEGDMRSA 195
Query: 376 ITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK 435
+ L S++ + + DG + Q +DE +S+F +L + K
Sbjct: 196 VNMLYASAIGRQSL-----------------DGKNVHTSQ--KDERVSIF-SLVTAVFGK 235
Query: 436 RETDNLVKMDQD 447
+ L+++ +D
Sbjct: 236 TSDEELIRLSRD 247
>gi|10640840|emb|CAC12618.1| probable replication factor C, 40 KD subunit [Thermoplasma
acidophilum]
Length = 330
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+P+SL E+ + + +++++++ E++ L+ G G GKT+T
Sbjct: 15 EIWTEKYRPKSLSEIYGEDENIQKLKSFVEKK--------EIPHLLFAGSVGTGKTSTAI 66
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A L D+ W+E M E + +D N ++ I R PS P
Sbjct: 67 ALAIELFG-----DS-----WKENMVEMNASNE--NGIDVIRNKIKDIAR---IKPSNPL 111
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K IL +D+ A LR+ + + +T + C + + QS
Sbjct: 112 GFK---ILFLDEADQLTAE-AQAALRRTMEIYSETTRF-----IFSCNYSSKIIPPIQS- 161
Query: 317 EELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
R V + P+ + I R L +I + E + + E + + + S GD+R+
Sbjct: 162 ------------RTVVMRFRPVPDEYISRKLQEIAKNEGFQIDEESMHALVEVSAGDMRK 209
Query: 375 AITSLQ 380
AI LQ
Sbjct: 210 AINVLQ 215
>gi|433638675|ref|YP_007284435.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
gi|433290479|gb|AGB16302.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
Length = 507
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 137/369 (37%), Gaps = 75/369 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L + K + +R W + K ++ G GVGKT+ +
Sbjct: 4 WTEKYRPDTLSAVRGNDKARDALREWAQNWDDHRK------AAIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + W P +E + ++ ++R+ S S ++ G +
Sbjct: 58 AADM-----NW----PV------------MELNASDHRGKDIIDRVAGEASKSGTLTGGT 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R + +V+S P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSR-AVTDVVKSASQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L +A + ++ SI L ICR+E + + +A+ + GD+R A+
Sbjct: 143 MSNSLRNA-CETIEFRDVSTRSIVPVLRDICRKEGIEFEADALRAIAENTSGDLRSAVND 201
Query: 379 LQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRET 438
LQ +++ S EE + RD T +F L + + K +
Sbjct: 202 LQ------------AIAESTERLTEEDV-------VTGSRDTTEGIFDYLDELIKEK-DA 241
Query: 439 DNLVKMDQDAFVVKDKF-----SRLPLKMDAPEKVLSQAHGQARPVLDFLHENCWLDIMR 493
+ +K D D +P E L+ A+G + + WL +R
Sbjct: 242 EGALKASYDVDETPDDLINWIEDNVPKDYAGAE--LADAYGY------LSNADRWLGRVR 293
Query: 494 QTMFYNLLR 502
T Y+ R
Sbjct: 294 ATQEYSYWR 302
>gi|18976464|ref|NP_577821.1| replication factor C large subunit [Pyrococcus furiosus DSM 3638]
gi|397652194|ref|YP_006492775.1| replication factor C large subunit [Pyrococcus furiosus COM1]
gi|42559538|sp|Q9UWR2.1|RFCL_PYRFU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=PfuRFC large subunit
gi|6539526|dbj|BAA88155.1| replication factor C large subunit [Pyrococcus furiosus DSM 3638]
gi|18892003|gb|AAL80216.1| replication factor C, large subunit [Pyrococcus furiosus DSM 3638]
gi|393189785|gb|AFN04483.1| replication factor C large subunit [Pyrococcus furiosus COM1]
Length = 479
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 92/242 (38%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L E+ Q + +E+VRAW E L K L++ G G GKT TV +
Sbjct: 6 WVEKYRPKKLSEIVNQEEAIEKVRAWIESWLHGHPPK--KKALLLAGPPGSGKTTTVYAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + E + E E+I RY + ++
Sbjct: 64 ANEYNFEVIELNASD------------------------ERTYEKISRYVQAAYTMDILG 99
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+ +D+ A E + L+ P ++ K V + E
Sbjct: 100 KRRKIIFLDEADNIEPSGAKE-----IAKLIDKAKNP---IIMAANKYWEVPKEIREKAE 151
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L V +T + L +I ++E ++ E + +A+ S GD+R AI
Sbjct: 152 L-----------VEYKRLTQRDVMNALIRILKREGITVPKEILLEIAKRSSGDLRAAIND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|448358570|ref|ZP_21547250.1| replication factor C large subunit [Natrialba chahannaoensis JCM
10990]
gi|445645719|gb|ELY98718.1| replication factor C large subunit [Natrialba chahannaoensis JCM
10990]
Length = 510
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K +++ W E D +D +++ G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDKLEEWAE-TWDDHQD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ LG W P +E + + +ERI + S ++ G
Sbjct: 58 ANDLG-----W----PV------------MELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+S + P +V E F +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSRE-VTRVVKSANQPMVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E E ++ +A+ + GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREDIEYEEEALEEIAEGTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|386001561|ref|YP_005919860.1| replication factor C large subunit [Methanosaeta harundinacea 6Ac]
gi|357209617|gb|AET64237.1| Replication factor C large subunit [Methanosaeta harundinacea 6Ac]
Length = 509
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 95/253 (37%), Gaps = 64/253 (25%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAW---FEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
W EKY+PR L+E+ K V E+ AW +E + + + +V+ G AGVGKT+
Sbjct: 6 WTEKYRPRRLKEVLGNGKAVSELEAWARSWERGIPEKR------AVVLYGPAGVGKTSAA 59
Query: 196 RQIASHLGARLYEW---DTPTPTIWQEYMHNCKTGLEYTSK-----LDEFENFVERIRRY 247
+A +G E D+ T + + ++ K LDE +N R
Sbjct: 60 LALAEEMGWDQIEMNASDSRTAAAISKVAGAAARMMTFSGKKRLVILDEADNLYGSADRG 119
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
GS + +L LV+ P ++
Sbjct: 120 GSAA---------------------------------MLRLVKEADQPVVLI-------- 138
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A + L L + G + IT ++ L +ICR E + + E ++ +A
Sbjct: 139 -----ANDYYGLSKPLRE-GTLGIQFRRITKSTVLSALREICRAEGAACTPELVEEIADM 192
Query: 368 SGGDIRQAITSLQ 380
+ GD+R I LQ
Sbjct: 193 ANGDLRSGINDLQ 205
>gi|407860390|gb|EKG07394.1| hypothetical protein TCSYLVIO_001482 [Trypanosoma cruzi]
Length = 582
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
WAEKYKP+++ ++ +++AW E G S+ + + +++G GVGKT +V
Sbjct: 14 WAEKYKPKTIAQMCYP-SSANKLKAWIETFDSGSSRMRAA----LLSGPPGVGKTTSVYV 68
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A LG + E++ + + K+ E+ + F + Y
Sbjct: 69 VARELGRIVVEYNA-------SHFRSGKSLREHVTVSINNNTFNKNASSY---------- 111
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ +ILL+D++ + E ++ + ++T P ++ C D Q
Sbjct: 112 --AKSILLMDEVDGCDIGGVKE-----IIEMTKTTKTP---IVCTCN-----DRWNQKLR 156
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
L + + D + N + N + L++ E SLS + + + Q SG DIR +
Sbjct: 157 PLLNYVEDFRVSRPPCNIVANYLCDKVLAR----EGISLSKQLLQDIIQRSGSDIRSMLN 212
Query: 378 SLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFL 432
+LQ L + + E+KA ++Q +DE + LF A FL
Sbjct: 213 NLQMWCLNRTSL-------------EQKA--LAACAVQSAKDEDVGLFDAAEMFL 252
>gi|443916573|gb|ELU37592.1| Rad17 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 737
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGL--EYTSKLDEF 237
+L +TG +G GKTAT++ +A L A + EW + E+ G +Y S +
Sbjct: 264 ILALTGPSGSGKTATLQILARELEAEVVEWQANS----DEFSVAGDYGAFQDYESATTKL 319
Query: 238 ENFVERIRRYGSTS----------PSIPGESK----SSAILLIDDLP-VTNGR------T 276
+F+ER YG S P G+ + ILL++D P +++ R
Sbjct: 320 ASFLERAGVYGPLSLKAIRDSTPDPESKGKERRLESKHKILLLEDFPSISHPRVRGAFHA 379
Query: 277 AFERLRQCL---LLLVRSTHIPTAVVLTECG-KADSVDSTAQSFEELQSILVDAGARKVA 332
A R + + + + P +++++ G +AD D++ S +L R V
Sbjct: 380 ALTRFAEAVPPSAAVSSLVYPPLVLIISDAGLRAD--DTSPYSSSHRDDVL---DIRSV- 433
Query: 333 LNPITNGS--IKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFS 382
L P GS + + S + + + L E ID + +A+ GDIR AIT +QF+
Sbjct: 434 LPPALLGSHYVTQINSSNSKSKSHGLPKETIDALIEAANGDIRSAITGVQFA 485
>gi|110590957|pdb|2CHG|A Chain A, Replication Factor C Domains 1 And 2
gi|110590958|pdb|2CHG|B Chain B, Replication Factor C Domains 1 And 2
gi|110590959|pdb|2CHG|C Chain C, Replication Factor C Domains 1 And 2
gi|110590960|pdb|2CHG|D Chain D, Replication Factor C Domains 1 And 2
Length = 226
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 47/249 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+PR+L+E+ Q + ++ ++ + E + + L+ +G G GKTAT
Sbjct: 5 EIWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------NIPHLLFSGPPGTGKTATAI 56
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--FENFVERIRRYGSTSPSI 254
+A L + N + + DE + +I+ + T+P I
Sbjct: 57 ALARDL-----------------FGENWRDNFIEMNASDERGIDVVRHKIKEFARTAP-I 98
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G L D + + A LR+ + + +S C S + ++
Sbjct: 99 GGAPFKIIFLDEADALTADAQAA---LRRTMEMYSKS-----------CRFILSCNYVSR 144
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +QS P+ ++K+ L +IC +E ++ + ++ + SGGD R+
Sbjct: 145 IIEPIQSRCA-----VFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRK 199
Query: 375 AITSLQFSS 383
AI +LQ ++
Sbjct: 200 AINALQGAA 208
>gi|171689552|ref|XP_001909716.1| hypothetical protein [Podospora anserina S mat+]
gi|170944738|emb|CAP70849.1| unnamed protein product [Podospora anserina S mat+]
Length = 912
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 107/265 (40%), Gaps = 41/265 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P +L ++ + VE ++ W F++R D + ++I+G
Sbjct: 409 QLWTSKYAPTALNQICGNKANVERIQGWLKNWPKHKKYDFQKRGADGMGGY--RAVIISG 466
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT + +HL A+L +D + + + ++ + + E N +
Sbjct: 467 PPGIGKTTS-----AHLAAKLEGYD-----VIESNASDSRSKKLVENGVMEVVNNTSLLG 516
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
+ + +K +L++D++ +G +A +R L L + T +P ++ C
Sbjct: 517 YFAGDGKTA-DAAKKKIVLVMDEV---DGMSAGDRGGVGALAKLCKKTEVPMILI---CN 569
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
D + + D + T I+ + IC +E + ++ +
Sbjct: 570 -----DRRLPKMKPFDHVAFD-----IKFQRPTVDQIRSRVMTICHREGLKMPLPVVNAL 619
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM 389
+ SG DIRQ I L + L Q M
Sbjct: 620 IEGSGKDIRQIINMLATAKLDQTTM 644
>gi|336260371|ref|XP_003344981.1| hypothetical protein SMAC_06758 [Sordaria macrospora k-hell]
gi|380095054|emb|CCC07556.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1075
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 53/271 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QLW KY P +L ++ + VE+++ W F++R D + ++I+G
Sbjct: 478 QLWTTKYAPTALNQICGNKANVEKIQNWLRNWPKARKYDFQKRGADGSG--GSRAIIISG 535
Query: 186 QAGVGKTATVRQIASHLGARLYEWDT----PTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
G+GKT A+HL A+L +D + T ++ + N + + + L F F
Sbjct: 536 PPGIGKT-----TAAHLAAKLEGYDVIESNASDTRSKKLVENGVSDVMTNTSLLGF--FA 588
Query: 242 ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVL 300
++ + K +L++D++ +G +A +R L R T +P ++
Sbjct: 589 GDGKQVDA--------GKKKIVLIMDEV---DGMSAGDRGGVGALAKFCRKTEVPLILIC 637
Query: 301 TE--CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
E K D A + Q VD I+ + IC +E +
Sbjct: 638 NERRLPKMKPFDHVAFDI-KFQRPTVD--------------QIRSRIMTICHREGLKIPP 682
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
++ + + SG DIRQ I + + L Q M
Sbjct: 683 PVVNALIEGSGKDIRQIINMISTAKLDQSTM 713
>gi|390371027|dbj|GAB64908.1| replication factor C subunit 1 [Plasmodium cynomolgi strain B]
Length = 876
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 50/271 (18%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE---------------ERLGDSK 173
A S QLW EKY+P++L EL + V +++ W +
Sbjct: 380 ADQSKILNQLWVEKYRPKNLNELVGNNQNVLKLKNWLASWDDVCIKGLKKQVTKTFRGVY 439
Query: 174 DKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK 233
+ + +++G AG+GKT T + +A G + E++ K +E S+
Sbjct: 440 ENVNARCALLSGSAGIGKTTTAKIVAESSGYNVIEFNASD--------ERNKAAVEKISE 491
Query: 234 LDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRST 292
+ G + SI + + +++D++ +G ++ ++ +L ++ T
Sbjct: 492 M----------ATGGYSIASIKSKKLTKTCIIMDEV---DGMSSGDKGGSAAILKMIEKT 538
Query: 293 HIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
P + D L + D P N +KR L +IC+QE
Sbjct: 539 KCPIICICN--------DRQNSKMRTLANKCYDLK----FTTPNKNSVVKRLL-EICKQE 585
Query: 353 QYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
+ ++L+ +++ GD+RQ + +LQ S
Sbjct: 586 DIMMEPNALELLWESTNGDMRQMLNALQLLS 616
>gi|11499642|ref|NP_070884.1| replication factor C small subunit [Archaeoglobus fulgidus DSM
4304]
gi|42559325|sp|O28219.1|RFCS_ARCFU RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
AltName: Full=afRFC small subunit; Short=afRFCsm
gi|110590966|pdb|2CHQ|A Chain A, Replication Factor C Adpnp Complex
gi|110590967|pdb|2CHQ|B Chain B, Replication Factor C Adpnp Complex
gi|110590968|pdb|2CHQ|C Chain C, Replication Factor C Adpnp Complex
gi|110590969|pdb|2CHV|A Chain A, Replication Factor C Adpnp Complex
gi|110590970|pdb|2CHV|B Chain B, Replication Factor C Adpnp Complex
gi|110590971|pdb|2CHV|C Chain C, Replication Factor C Adpnp Complex
gi|110590972|pdb|2CHV|D Chain D, Replication Factor C Adpnp Complex
gi|110590973|pdb|2CHV|E Chain E, Replication Factor C Adpnp Complex
gi|110590974|pdb|2CHV|F Chain F, Replication Factor C Adpnp Complex
gi|2648471|gb|AAB89191.1| activator 1, replication factor C, 35 KD subunit [Archaeoglobus
fulgidus DSM 4304]
Length = 319
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 47/249 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+PR+L+E+ Q + ++ ++ + E + + L+ +G G GKTAT
Sbjct: 5 EIWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------NIPHLLFSGPPGTGKTATAI 56
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--FENFVERIRRYGSTSPSI 254
+A L + N + + DE + +I+ + T+P I
Sbjct: 57 ALARDL-----------------FGENWRDNFIEMNASDERGIDVVRHKIKEFARTAP-I 98
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G L D + + A LR+ + + +S C S + ++
Sbjct: 99 GGAPFKIIFLDEADALTADAQAA---LRRTMEMYSKS-----------CRFILSCNYVSR 144
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +QS P+ ++K+ L +IC +E ++ + ++ + SGGD R+
Sbjct: 145 IIEPIQS-----RCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRK 199
Query: 375 AITSLQFSS 383
AI +LQ ++
Sbjct: 200 AINALQGAA 208
>gi|395645578|ref|ZP_10433438.1| Replication factor C large subunit [Methanofollis liminatans DSM
4140]
gi|395442318|gb|EJG07075.1| Replication factor C large subunit [Methanofollis liminatans DSM
4140]
Length = 452
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 110/255 (43%), Gaps = 52/255 (20%)
Query: 137 QLWAEKYKPRSLEELA----VQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
Q W EKY+P+SL+E+ R+ V+ R+W + T L+ G+ G+GKT
Sbjct: 2 QDWTEKYRPQSLQEIVGNGPAVRQIVDWARSW----------RRGTPPLIFYGKPGIGKT 51
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
+ +A +G W+ +E + + +ER+ G++S
Sbjct: 52 SAAHALARDMG-----WEI----------------VELNASDQRTKAIIERV--AGTSST 88
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
+ ++++D+ +G TA + ++ ++++ P ++ A+ +
Sbjct: 89 TTSLSGAERKLIILDEADNLHG-TADRGGARAIMEIIKNARQPIVLI------ANDIYGL 141
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
A+ + L V I S+ L +ICR E + S E + +A+++GGD+
Sbjct: 142 AKEIKAL--------GEPVLFRAIQARSMVPRLREICRDEGLACSPEALTGIAESAGGDM 193
Query: 373 RQAITSLQFSSLKQD 387
R A+ L +++ ++
Sbjct: 194 RSAVNMLYAAAIGRE 208
>gi|402467377|gb|EJW02684.1| DNA polymerase III, subunit gamma and tau [Edhazardia aedis USNM
41457]
Length = 321
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 40/246 (16%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
L EKY+P+ LE++ VE +R + + + L+ TG G GKT +
Sbjct: 3 LLVEKYRPKKLEDVFGNTDAVETLRCILKAK--------NMPHLLFTGPPGTGKTTCAKI 54
Query: 198 IASHLGARLYEWDTPTPTIWQEYM--HNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSI 254
IA L I E M H + LE + D + + +RI+ + +
Sbjct: 55 IAKEL---------LCANITSEEMKNHYNQCCLELNASDDRGIDVIRDRIKMFATKKVDS 105
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K IL D T + A R V T + T +L ++ ++
Sbjct: 106 QDAIKKIIILDEADSMTTAAQQALRR--------VMETCVETRFILI-------CNTFSK 150
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
FE +QS + + + N +IK L++I +E LS + ++++ S GD+RQ
Sbjct: 151 IFEPIQS-----RCAVLKFDKLDNCAIKTYLARIGNEENIQLSDDALEMIITLSDGDMRQ 205
Query: 375 AITSLQ 380
I LQ
Sbjct: 206 GINILQ 211
>gi|347524285|ref|YP_004781855.1| Replication factor C [Pyrolobus fumarii 1A]
gi|343461167|gb|AEM39603.1| Replication factor C [Pyrolobus fumarii 1A]
Length = 327
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 63/263 (23%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVG 190
AS + LWAEKY+P++L+E+ Q + V ++ + EE+ + L+ G G G
Sbjct: 2 ASELAELLWAEKYRPKTLDEIVNQEEIVRRLKKFVEEK--------NMPHLLFVGPPGTG 53
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKT----GLE-YTSKLDEFENFVERIR 245
KT +A L Y ++YM G+E +K+ EF
Sbjct: 54 KTTAAHALAHDLFGENY----------RQYMLELNASDERGIETIRTKVKEFAR------ 97
Query: 246 RYGSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVL 300
T P IP + I+L+D D + + A RL + R I P+ ++
Sbjct: 98 --SRTPPGIPFK-----IVLLDEADNMTADAQQALRRLMEMYTASTRFILIANYPSKII- 149
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
+ + S F P+ + L IC QE E
Sbjct: 150 ------EPIQSRCAIFR---------------FTPLKKEDVVARLKWICEQEGCQYDEEA 188
Query: 361 IDLVAQASGGDIRQAITSLQFSS 383
++ + + S GD+R+AI LQ ++
Sbjct: 189 LETIYEISEGDMRRAINILQAAA 211
>gi|448298272|ref|ZP_21488302.1| replication factor C large subunit [Natronorubrum tibetense GA33]
gi|445591813|gb|ELY46010.1| replication factor C large subunit [Natronorubrum tibetense GA33]
Length = 503
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 102/249 (40%), Gaps = 42/249 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W + D K +++ G G+GKT+ +
Sbjct: 4 WTEKYRPTTLSEVRGNNKARDSLEEWA--KTWDDHRK----AVIVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W P +E + + +ER+ S S ++
Sbjct: 58 ANDMG-----W----PV------------MELNASDSRGADVIERVAGEASKSGTLTAGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R+ + +V+ + P +V E F +
Sbjct: 97 AGRRLVIMDEADNFHGNADYGGSRE-VTRVVKEANQPVILVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L ++ + ++ SI L ICR+E E ++ +++++ GD+R A+
Sbjct: 143 MSKSLRNS-CETIEFRDVSKRSIVPVLRDICRREGVEFEEEALEKISESTSGDLRSAVND 201
Query: 379 LQFSSLKQD 387
LQ + + D
Sbjct: 202 LQAVAEEAD 210
>gi|361124088|gb|EHK96209.1| putative Replication factor C subunit 1 [Glarea lozoyensis 74030]
Length = 1061
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 39/263 (14%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQAG 188
LW KY P ++ ++ + +VE+++ W + K +FS ++I G G
Sbjct: 469 LWTSKYAPTAINQICGNKGQVEKIQKWLKGWAQAHKYEFSKKGPDGLGGYRAIMIHGPPG 528
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE-FENFVERIRRY 247
+GKT A+HL A+L +D + + + ++ + L+E N R
Sbjct: 529 IGKTT-----AAHLAAKLAGYD-----VLENNASDTRSKKMVETGLNEVLSNNSLRGYYA 578
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGKA 306
G P +K + +L++D++ +G +A +R + + + T IP ++ E +
Sbjct: 579 GDGKPV--DATKKNIVLIMDEV---DGMSAGDRGGVGAMAKICKKTDIPMILICNEFNQ- 632
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
Q + + + + T ++ ++ IC +E L ID + +
Sbjct: 633 -------QKMKPFEHVTF-----PIPFKRPTVDMVRSRIATICHREGMKLPMNVIDALIE 680
Query: 367 ASGGDIRQAITSLQFSSLKQDPM 389
S DIRQ I + + L + M
Sbjct: 681 GSNKDIRQIINMISTAKLDESSM 703
>gi|424814735|ref|ZP_18239913.1| replication factor C large subunit [Candidatus Nanosalina sp.
J07AB43]
gi|339758351|gb|EGQ43608.1| replication factor C large subunit [Candidatus Nanosalina sp.
J07AB43]
Length = 395
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 46/254 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVR 196
+W EKY+P +L + K+ +E++ W + GD +++ GQAG GKT+ V
Sbjct: 1 MWVEKYRPETLSDYRGASKEKKEIKNWAQNWEQGDKP-------VLLHGQAGTGKTSLVE 53
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A+ LG L E + + + SKL E E R+ S G
Sbjct: 54 ALANDLGYELVETNA--------------SDVRTKSKLK--EELKEATRQ-----ASFYG 92
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K ++L+D++ +G + + + + +V T P VV+T D+ DS ++
Sbjct: 93 GQK---LILVDEVDGMSGNSDRGGVSE-ISDIVDETRFP--VVMTAN---DAYDSKIRTL 143
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
++ + L+ + SI L I E +A+++GG +R AI
Sbjct: 144 RN--------KSKTIKLDSVHTNSIAAHLRDILENEGIEYEDGAPKRIARSAGGQMRSAI 195
Query: 377 TSLQFSSLKQDPML 390
LQ ++ Q+ +L
Sbjct: 196 NDLQAVAMGQEELL 209
>gi|392595637|gb|EIW84960.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 369
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 96/249 (38%), Gaps = 35/249 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTAT 194
Q W EKY+P++++E++ Q V +R K FSTN+ ++ G G GKT+T
Sbjct: 20 QPWVEKYRPKTIDEVSAQEHAVAVLR----------KTLFSTNLPHMLFYGPPGTGKTST 69
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+ +A L+ D + + + + K+ F R + S +
Sbjct: 70 ILALARQ----LFGPDNFRNRVLELNASDDRGISIVREKIKNFARQTPRAQAVASDGKTY 125
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
P IL D + + A R+ + + R + C +
Sbjct: 126 PCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLV--------CNYVTRI----- 172
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E L S K P+ + S LS I QE +S E I + S GD+R+
Sbjct: 173 -IEPLAS-----RCSKFRFTPLDSSSTSNRLSHIAAQEHVDVSPEVIQALIDTSSGDLRR 226
Query: 375 AITSLQFSS 383
+IT LQ +S
Sbjct: 227 SITYLQSAS 235
>gi|124485323|ref|YP_001029939.1| replication factor C large subunit [Methanocorpusculum labreanum Z]
gi|150415663|sp|A2SQR6.1|RFCL_METLZ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|124362864|gb|ABN06672.1| replication factor C large subunit [Methanocorpusculum labreanum Z]
Length = 476
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 44/245 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WAEKY+P L ++ V ++ W + DS+ L+ TG+ G+GKT+ +
Sbjct: 3 WAEKYRPMHLADILGNGSAVRQIVDWAKTWTPDSRP------LLFTGKPGIGKTSAALAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A R +W+ LE + + +ER+ ST+ S+ G
Sbjct: 57 A-----RDMDWEV----------------LELNASDARTKTIIERVAGNSSTTTSLFGAG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ +++ID++ G R +L + + G +DS+
Sbjct: 96 RK--LIIIDEVDNLEGNADRGGARAIADILKEAKQPIVLIANDAYGVSDSIRR------- 146
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L D V I ++++ + +ICR E + + + +A++S GD+R A+
Sbjct: 147 ----LCDP----VPFRAIGVSTLQKRMKEICRFEDIACGEDALSAIAESSAGDMRTAVNM 198
Query: 379 LQFSS 383
L SS
Sbjct: 199 LFGSS 203
>gi|157870127|ref|XP_001683614.1| putative replication factor C, subunit 1 [Leishmania major strain
Friedlin]
gi|68126680|emb|CAJ04631.1| putative replication factor C, subunit 1 [Leishmania major strain
Friedlin]
Length = 661
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 40/251 (15%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAW---FEERLGDSKDKFSTNVLVITGQAGVG 190
S +LWA+KYKP S+ E+ +++AW F S D + ++++G GVG
Sbjct: 17 SRSELWADKYKPHSIAEMCYP-VCANKLKAWLEAFTPIASPSDDPKKPHGVLLSGSPGVG 75
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
KT TV +A LG + E++ ++ S+ EN + I + +
Sbjct: 76 KTTTVYVVAHELGRTVVEYNAS----------------DFRSRKSLKENVSDLINNHAFS 119
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
+ + S ++ ILL+D++ + E ++ +++ST IP +L C D
Sbjct: 120 ARAT---SYTNVILLMDEVDGCDIGGVGE-----VIEMLKSTRIP---ILCTCN-----D 163
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
L + + D + N R L++ E SLS + + + SG
Sbjct: 164 RWHPKLRSLLNYVEDMRFSHPPCTIVANYLCDRVLAR----EGISLSKPLLQDIIKNSGS 219
Query: 371 DIRQAITSLQF 381
DIR + +LQ
Sbjct: 220 DIRNMLNNLQL 230
>gi|302923420|ref|XP_003053672.1| hypothetical protein NECHADRAFT_30719 [Nectria haematococca mpVI
77-13-4]
gi|256734613|gb|EEU47959.1| hypothetical protein NECHADRAFT_30719 [Nectria haematococca mpVI
77-13-4]
Length = 1042
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 42/275 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITG 185
QL KY P L + + +VE+++ W F+ R D ++I+G
Sbjct: 458 QLLTSKYAPTQLSHICGNKAQVEKIQNWLRNWPKSKKYNFQRRGADGMG--GERAIIISG 515
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT A+HL A+L +D + + + ++ S + + N +
Sbjct: 516 PPGIGKTT-----AAHLAAKLEGYD-----VLESNASDTRSKKLVESGVSDVMNNTSLLG 565
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
+ + +K +L++D++ +G +A +R L R T IP ++ E
Sbjct: 566 YFAGDGKDV-DTTKKKIVLIMDEV---DGMSAGDRGGVGALAKYCRKTEIPLILICNE-- 619
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
+ +++ D A + N T ++ + IC +E L +D +
Sbjct: 620 ---------RKLPKMKPF--DHVAFDIRFNRPTVDQVRSRIMTICHREGLKLPPAVVDAL 668
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM-LNLSLSISK 398
+ S DIRQ I + + L Q M + S ++SK
Sbjct: 669 IEGSNKDIRQIINMISTAKLDQTSMDFDQSKAMSK 703
>gi|384497871|gb|EIE88362.1| hypothetical protein RO3G_13073 [Rhizopus delemar RA 99-880]
Length = 126
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 335 PITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSL 394
PIT ++ + L+KI E +S +++D + + S GD+R AI LQF S
Sbjct: 22 PITKKALLKVLNKIMTSEMIGVSKDKLDGIVELSHGDLRSAINMLQFYS----------- 70
Query: 395 SISKPNFPEEKADGHGGFSIQFGR-DETLSLFHALGKFLHNKRE 437
+ S+ N + K D G S F + L LFHA GK L+ KR+
Sbjct: 71 TPSRTNDRKRKRD---GISTLFDKVTGPLPLFHAAGKVLYAKRD 111
>gi|448734127|ref|ZP_21716354.1| replication factor C large subunit [Halococcus salifodinae DSM
8989]
gi|445800636|gb|EMA50985.1| replication factor C large subunit [Halococcus salifodinae DSM
8989]
Length = 493
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + + W E + D V ++ G GVGKT+ +
Sbjct: 4 WTEKYRPSTLSEVRGNNKARDALAEWAE-----TWDAHGEAV-ILHGAPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + +W PTI E + + VERI + S ++
Sbjct: 58 AADM-----DW----PTI------------ELNASDQRTKAVVERIAGEAAKSGTLTEGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E D +S + E
Sbjct: 97 AGRRLVVMDEADNLHGNVDRGGSR-AITSLVKEAGQPMILIANEF--YDMSNSLRNACET 153
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
++ D GAR SI L ICR+E ++ ++ +A+A+ GD+R A+
Sbjct: 154 IE--FRDVGAR----------SILPVLRDICRREDVEYESDALEAIAEANSGDLRGAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|238496567|ref|XP_002379519.1| DNA replication factor C subunit Rfc1, putative [Aspergillus flavus
NRRL3357]
gi|220694399|gb|EED50743.1| DNA replication factor C subunit Rfc1, putative [Aspergillus flavus
NRRL3357]
Length = 852
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 47/265 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P S+ + + VE++++W + ++K FS ++I G
Sbjct: 264 ELWTTKYAPTSMNMICGNKTAVEKLQSWLRDWHKNAKGNFSKPGKDGTGIYRAVMIHGPP 323
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+HL A+L +D + T ++ + G L+ TS F +
Sbjct: 324 GIGKTT-----AAHLVAKLEGYDIVETNASDTRSKKLVETGLLGVLDTTSLQGYFAADGQ 378
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ R K + +L++D++ +G +A +R L + + THIP ++
Sbjct: 379 KVHR-----------EKKNMVLIMDEV---DGMSAGDRGGVGALAAIAKKTHIPLILICN 424
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D ++ T I+ LS IC +E + +
Sbjct: 425 E-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLKIPPPVL 471
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQ 386
D + + + DIRQ I L L Q
Sbjct: 472 DSLIEGTHADIRQIINMLSTVKLDQ 496
>gi|448411517|ref|ZP_21575918.1| replication factor C large subunit [Halosimplex carlsbadense 2-9-1]
gi|445670089|gb|ELZ22693.1| replication factor C large subunit [Halosimplex carlsbadense 2-9-1]
Length = 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 48/252 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN--VLVITGQAGVGKTATVR 196
W EKY+P SL E+ K + +R W D + + +V+ G G+GKT+
Sbjct: 3 WTEKYRPSSLAEIRGNDKARDALREW--------ADTWEDHREAVVLHGSPGIGKTSAAH 54
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+AS G W T +E + ++ +ER+ + S ++
Sbjct: 55 ALASDEG-----WAT----------------IELNASDSRTKDVIERVAGEAAKSGTLTA 93
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKADSVDSTAQS 315
++++D+ +G +R + LV+ P ++ E
Sbjct: 94 GEAGRRVVILDEADNLHGN--VDRGGSAAITSLVKEASQPMILIANE------------- 138
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
F ++ + L +A + + ++ SI L +CR+E +D +A+ + GD+R A
Sbjct: 139 FYDMSNGLRNA-CQDIEFRDVSKRSIVPVLRDLCRKEGVEYDDAALDQIAEMNSGDLRGA 197
Query: 376 ITSLQFSSLKQD 387
I LQ + +D
Sbjct: 198 IKDLQAMAEGRD 209
>gi|424812315|ref|ZP_18237555.1| replication factor C small subunit [Candidatus Nanosalinarum sp.
J07AB56]
gi|339756537|gb|EGQ40120.1| replication factor C small subunit [Candidatus Nanosalinarum sp.
J07AB56]
Length = 317
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 58/259 (22%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+P +L+E+ Q+ VE ++A+ EE L+ +G AG GKT +
Sbjct: 6 IWTEKYRPDTLDEVVGQQDIVERLQAFVEEG--------QIPHLMFSGPAGTGKTTSAVS 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--FENFVERIRRYGSTSPSIP 255
+A L Y + + T+ DE + ++I+ + T P +
Sbjct: 58 VAKDL-----------------YGSEWRQNFKETNASDERGIDVVRDQIKSFARTKP-VN 99
Query: 256 GESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
E K ++ +D D T+ + A R + A + C +
Sbjct: 100 AEYK---MIFLDEADALTTDAQQALRRTMEQFS--------DNARFVLSCNYS------- 141
Query: 314 QSFEELQSILVDAGARKVAL---NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
S ++D + AL N + ++R ++++ E + +S E I V + SGG
Sbjct: 142 -------SKIIDPIQSRCALFRFNRLEEEQVRRYITRVAEGEGFRISEEAIQGVMRVSGG 194
Query: 371 DIRQAITSLQFSSLKQDPM 389
D+R+ LQ +L++D +
Sbjct: 195 DLRRTTNVLQTVALRKDEI 213
>gi|406863946|gb|EKD16992.1| hypothetical protein MBM_04569 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1072
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 37/263 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
QLW KY P ++ ++ + +VE+++AW + + F ++I G
Sbjct: 469 QLWTSKYAPTAINQICGNKAQVEKIQAWLKGWPKAHRHNFQMKGAEGLGGYRAIIIHGPP 528
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT A+H+ A+L +D + + + ++ S L E N +
Sbjct: 529 GIGKT-----TAAHMAAKLSGYD-----VIESNASDTRSKKLVESGLSEVLNNTSLNGFF 578
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV-RSTHIPTAVVLTECGKA 306
+ K +L++D++ +G +A +R L V + T IP ++ E
Sbjct: 579 AGDGKDV-NLQKKKIVLIMDEV---DGMSAGDRGGVGALAKVCKKTDIPMILICNE---- 630
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ + D R+ L ++ ++ IC +E L ID + +
Sbjct: 631 ----RKLPKMKPFDFVTFDIPFRRPTLE-----QVRSRIATICHREGLKLPGNVIDALIE 681
Query: 367 ASGGDIRQAITSLQFSSLKQDPM 389
S DIRQ I + + L Q M
Sbjct: 682 GSNRDIRQIINMISTAKLDQSAM 704
>gi|407425478|gb|EKF39450.1| hypothetical protein MOQ_000322 [Trypanosoma cruzi marinkellei]
Length = 582
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 57/306 (18%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQ 186
+ + +++ + WAEKYKP+++ ++ +++AW E G +K + + +++G
Sbjct: 3 AVTNAANVGEPWAEKYKPKTIAQMCYP-SSANKLKAWIEAFDSGTAKMRAA----LLSGP 57
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
GVGKT +V +A LG + E++ + + K+ E+ + F
Sbjct: 58 PGVGKTTSVYVVARELGRVVVEYNA-------SHFRSGKSLREHVTVAINNNIF------ 104
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
++ S + +ILL+D++ + E ++ + ++T IP ++ C
Sbjct: 105 ------NMNASSYAKSILLMDEVDGCDIGGVKE-----VIEMTKTTKIP---IVCTCN-- 148
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D Q L + + D + N + N + L++ E SLS + + + Q
Sbjct: 149 ---DRWNQKLRSLMNYVEDFRVSRPPCNIVANYLCDKVLAR----EGISLSKQLLQDIIQ 201
Query: 367 ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFH 426
SG DIR + +LQ L + + E+KA ++Q +D + LF
Sbjct: 202 RSGSDIRSMLNNLQMWCLNRTSL-------------EQKA--LAACAVQSAKDGDVGLFD 246
Query: 427 ALGKFL 432
A FL
Sbjct: 247 AAEMFL 252
>gi|374636438|ref|ZP_09708008.1| AAA ATPase central domain protein [Methanotorris formicicus
Mc-S-70]
gi|373558999|gb|EHP85314.1| AAA ATPase central domain protein [Methanotorris formicicus
Mc-S-70]
Length = 482
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 109/246 (44%), Gaps = 42/246 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P++L+E+A + E+++ W E+ + K +++ G G GKT
Sbjct: 4 WVEKYRPKTLKEVAGHNEIKEKLKKWIEDHIKGKNPK----PIILVGNPGCGKTTL---- 55
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
+H AR Y +D +E + + +I STS S+ G+
Sbjct: 56 -AHALARDYGFDV----------------IELNASDKRNRAAIRQIVGTASTSKSLTGK- 97
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++++D++ +G + + +L +++ P ++LT D T + +
Sbjct: 98 --NILIILDEVDGISGTEDSGGVSE-ILKVIKEAKNP--IILTAN---DIYKPTLKPLRD 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + + + + +I L +I ++E + + + ++A+ SGGD+R AI
Sbjct: 150 VCEV--------INVPNVHTNTILAVLKRIAKKENLDVDEKTLKIIAKHSGGDLRAAIND 201
Query: 379 LQFSSL 384
L+ +L
Sbjct: 202 LEALAL 207
>gi|68062632|ref|XP_673324.1| replication factor C subunit 1 [Plasmodium berghei strain ANKA]
gi|56491097|emb|CAH96916.1| replication factor C subunit 1, putative [Plasmodium berghei]
Length = 512
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 117/284 (41%), Gaps = 56/284 (19%)
Query: 119 EGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE------------ 166
+ + N + S QLW +KYKP +E+L + V +++ W
Sbjct: 82 QNMKNEQEQEQNVSHVLNQLWVDKYKPTKIEDLVGNTQNVFKLKTWLSSWDDVCIKGLKK 141
Query: 167 ---ERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN 223
+ + + + +++G AG+GKT T + +++ G +
Sbjct: 142 QVTKTFRGNFENVNAKCALLSGPAGIGKTTTAKIVSTSSGYNV----------------- 184
Query: 224 CKTGLEYTSKLDEFENFVERIRRY---GSTSPSIPGESKSSAILLIDDLPVTNGRTAFER 280
+E+ + + + VE+I G + S+ ++ +++D++ +G ++ ++
Sbjct: 185 ----IEFNASDERNKAAVEKIGDMATGGYSITSLNNKNLKKTCIIMDEV---DGMSSGDK 237
Query: 281 -LRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNG 339
+L L+ T P + + + + + A +L+ P N
Sbjct: 238 GGSSAILKLIEKTKCPIICICND-RQNSKMRTLANKCYDLK-----------FTTPNKNS 285
Query: 340 SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
+KR L +IC++E + ++L+ ++S GDIRQ + +LQ S
Sbjct: 286 VVKRLL-EICKKENIMMEPNALELLWESSNGDIRQILNALQLLS 328
>gi|295674213|ref|XP_002797652.1| replication factor C subunit 1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280302|gb|EEH35868.1| replication factor C subunit 1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1066
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 45/264 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW KY P SL + + VE++++W +K F ++I G
Sbjct: 467 RLWTSKYAPTSLNMICGNKTAVEKLQSWLRNWRNSAKADFKKGGKDGTGIYRAVMIHGPP 526
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 527 GIGKTT-----AAHLVAKLENYDVVETNASDTRSKGLLETGLRGVLDTTSLQGY--FSGE 579
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
++ S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 580 GKKVDS--------GKKNLVLIMDEV---DGMSAGDRGGVGALASVAKKTRIPMILICNE 628
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ ++ I+ LS IC +E + + +D
Sbjct: 629 --------RRLPKMRPFDSVTFDLPFRRPTVD-----QIRARLSTICYREGLRIPPQVLD 675
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ 386
+ Q + DIRQ I L + L Q
Sbjct: 676 SLIQGTHADIRQVINMLSTAKLDQ 699
>gi|300710704|ref|YP_003736518.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
gi|448295034|ref|ZP_21485107.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
gi|299124387|gb|ADJ14726.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
gi|445585004|gb|ELY39308.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
Length = 482
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K + R W E K +++ G GVGKT+ +
Sbjct: 4 WTETYRPSTLSEVRGNDKARDAFREWAESWEDHQK------AVILHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ LG W PTI E + + V+RI + S ++ G +
Sbjct: 58 ANDLG-----W----PTI------------ELNASDQRKADIVKRIAGEAAKSGTLTGGT 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + R + +++S + P ++ E F +
Sbjct: 97 AGRRLVILDEADNFHGNVDYGGSR-AVTDVIKSANQPVVLIANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L ++ V ++ SI L ICRQE E ++ +A+ + GD+R A+
Sbjct: 143 MSQNLRNS-CETVEFRDVSKRSIVPVLRDICRQEGIEFEAEALEAIAENTDGDLRSAVND 201
Query: 379 LQFSSLKQDPM 389
LQ + ++D +
Sbjct: 202 LQALAEREDRL 212
>gi|448427732|ref|ZP_21584007.1| replication factor C large subunit [Halorubrum terrestre JCM 10247]
gi|445677626|gb|ELZ30125.1| replication factor C large subunit [Halorubrum terrestre JCM 10247]
Length = 506
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 83/378 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A F ++ L +A +++ ++ SI L +CR+E ++ + +A+
Sbjct: 147 -----ANDFYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDVCRKEGIEFESDALQRIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D SI+ + + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATQGRD-------SITVEDV------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPV--LDFL-H 484
L L + + L Q A+ V + L + E L + A V DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLARWI---ENNLLDVYEPAEAVRAYDFLAN 294
Query: 485 ENCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 295 ADVWLGRVRATQNYSYWR 312
>gi|332158285|ref|YP_004423564.1| replication factor C large subunit [Pyrococcus sp. NA2]
gi|331033748|gb|AEC51560.1| replication factor C large subunit [Pyrococcus sp. NA2]
Length = 479
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 94/246 (38%), Gaps = 45/246 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T+ W EKY+P+ L E+ Q +E+VRAW E L + K L++ G G GKT T
Sbjct: 2 TEIPWIEKYRPKRLSEIVNQEDAIEKVRAWIEAWLHGNPPK--KKALLLAGPPGSGKTTT 59
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
V +A+ + E + E +I RY + ++
Sbjct: 60 VYALANEYNFEVIELNASD------------------------ERTYNKIARYVQAAYTM 95
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K I+ +D+ A E + L+ P + A
Sbjct: 96 DILGKRRKIIFLDEADNIEPSGAAE-----IAKLIDKARNPIIM-------------AAN 137
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ E+ + D A V +T + L +I R+E ++ E + +A+ + GD+R
Sbjct: 138 HYWEVPKEIRDR-AELVEYKRLTQRDVMSALIRILRREGITVPKEILTEIAKRASGDLRA 196
Query: 375 AITSLQ 380
AI LQ
Sbjct: 197 AINDLQ 202
>gi|307166495|gb|EFN60580.1| Replication factor C subunit 1 [Camponotus floridanus]
Length = 935
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 129/295 (43%), Gaps = 52/295 (17%)
Query: 105 QKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQ-------RKK 157
+K N+ + P + +N ++ S S Q EKY+P++++++ Q R
Sbjct: 355 EKINICAPVIPKQTLDAINYSQETTSIGS---QPLVEKYRPKTMKQIIGQQGDKSCARNL 411
Query: 158 VEEVRAWFEERL------GDSKDKF--STNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
+R W++ R G SK S +++G GVGKT TV+ + LG L E+
Sbjct: 412 HVWLRDWYKNRQNSKLKNGSSKQTHGESFKAALLSGPPGVGKTTTVQVVCKELGYDLVEF 471
Query: 210 ---DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLI 266
DT T+ +E + +GL + + ++ ++ ++ S +LL+
Sbjct: 472 NASDTRNKTLLKEEV----SGLLSNTTMKDYVTGTKQ-------------KTTSKHVLLM 514
Query: 267 DDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDA 326
D++ G L Q LL L+++T +P + C D ++ ++ +
Sbjct: 515 DEVDGMAGNEDRGGL-QELLTLIKNTEVPIICI---CN--DRFNTRVKT--------ISM 560
Query: 327 GARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
+ + + + I+ + +C +E + TE ++ + +++ DIRQ I L+F
Sbjct: 561 HSYDLRFHKLRVEQIRSAMLSLCYKENIKMPTEDLNRLIESTNYDIRQVINHLEF 615
>gi|336476385|ref|YP_004615526.1| replication factor C [Methanosalsum zhilinae DSM 4017]
gi|335929766|gb|AEH60307.1| Replication factor C [Methanosalsum zhilinae DSM 4017]
Length = 317
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 109/251 (43%), Gaps = 47/251 (18%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
+++W EKY+P L+++ Q++ +E ++++ + R + L+ +G GVGKTAT
Sbjct: 3 EEIWIEKYRPMKLDDVVGQKEAIERLKSYVKTR--------NLPHLLFSGPPGVGKTATA 54
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
IA L W+ + E + + G++ +I+ + TSP
Sbjct: 55 VAIAHELFGD--SWNEN----FTELNASDERGIDVVRT---------KIKNFAKTSPIGG 99
Query: 256 GESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
+ K I+ +D D ++ ++A R + R T C S + ++
Sbjct: 100 ADFK---IIFLDEADALTSDAQSALRRTME------RYT--------GNCRFILSCNYSS 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
+ E +QS P+ + +K + + E L+ + ID + + GD+R
Sbjct: 143 KIIEPIQS-----RCAVYRFRPLADEPVKERIRYVADAEGIKLADDAIDAIGYVAQGDMR 197
Query: 374 QAITSLQFSSL 384
+A+ +LQ +++
Sbjct: 198 KALNALQAAAM 208
>gi|448491336|ref|ZP_21608277.1| replication factor C large subunit [Halorubrum californiensis DSM
19288]
gi|445693107|gb|ELZ45269.1| replication factor C large subunit [Halorubrum californiensis DSM
19288]
Length = 506
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 146/377 (38%), Gaps = 81/377 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITELVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A + ++ L +A +++ ++ SI L +CR+E ++ + +A+
Sbjct: 147 -----ANDYYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDVCRKEGIEFESDALQRIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D S+++ G + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATQGRD-----SITV--------------GDVVTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH-GQARPVLDFL-HE 485
L L + + L Q A+ V + L ++ VL +A DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLMRWLE--NNVLDVYEPAEAVRAYDFLANA 295
Query: 486 NCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 296 DVWLGRVRATQNYSYWR 312
>gi|226286728|gb|EEH42241.1| replication factor C subunit 1 [Paracoccidioides brasiliensis Pb18]
Length = 1066
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 45/264 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW KY P SL + + VE++++W +K F ++I G
Sbjct: 467 RLWTSKYAPTSLNMICGNKTAVEKLQSWLRNWRNSAKADFKKGGKDGTGIYRAVMIHGPP 526
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 527 GIGKTT-----AAHLVAKLENYDVVETNASDTRSKGLLETGLRGVLDTTSLQGY--FSGE 579
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
++ S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 580 GKKVDS--------GKKNLVLIMDEV---DGMSAGDRGGVGALASVAKKTRIPMILICNE 628
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ ++ I+ LS IC +E + + +D
Sbjct: 629 --------RRLPKMRPFDSVTFDLPFRRPTVD-----QIRARLSTICYREGLRIPPQVLD 675
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ 386
+ Q + DIRQ I L + L Q
Sbjct: 676 SLIQGTHADIRQVINMLSTAKLDQ 699
>gi|260950765|ref|XP_002619679.1| hypothetical protein CLUG_00838 [Clavispora lusitaniae ATCC 42720]
gi|238847251|gb|EEQ36715.1| hypothetical protein CLUG_00838 [Clavispora lusitaniae ATCC 42720]
Length = 784
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 116/298 (38%), Gaps = 48/298 (16%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQ------RKKVEEVRAWFEERLG------DSKDK 175
S S+ + Q+W+EKY+P +L R + +R W G D+ D
Sbjct: 128 SKSSQAPLPQVWSEKYRPTKYMQLCSAGNERQYRAIMHWLRKWGSVVFGHAPTDLDAVDH 187
Query: 176 FST---NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
S VL++ G +G GKTA V IA +G + E + + MH G+E
Sbjct: 188 LSRPLRKVLLVHGPSGTGKTAAVHLIAQQMGYSVQELNAANS---MDSMH----GVESLD 240
Query: 233 KLDEFENFVERIR---RYGSTSPSIPGESKSSAILL---------------IDDLPVTNG 274
F N ++ + T+ S+ G K + +++ I +L +
Sbjct: 241 NAGRFANATAALKLKIKNALTTNSVTGGGKPTCLVIDEIDCSINAGDIIRVISELVALDS 300
Query: 275 RTAFERLRQCLLLLVR-----STHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGAR 329
R+ + ++ +L R + I T V D + + + + + R
Sbjct: 301 RSEDPKKKKSKFVLNRPIICIANDIYTQNVRLGPNPMDKLRPLCELVPFRRPVSSNNSGR 360
Query: 330 KVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD 387
+N S+K L + +E+ L ++I + + GDIR + +QFSS K D
Sbjct: 361 ---INIAAQKSVKEFLQNVNSKEKMGLDAKEIAEIFEVCEGDIRACLNHMQFSSRKLD 415
>gi|146304798|ref|YP_001192114.1| replication factor C small subunit [Metallosphaera sedula DSM 5348]
gi|145703048|gb|ABP96190.1| replication factor C small subunit [Metallosphaera sedula DSM 5348]
Length = 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+PRSL+++ QR VE ++ + +E+ + L+ G G GKT +
Sbjct: 6 LWAEKYRPRSLDDIVNQRDIVERLKHFVKEK--------NMPHLLFAGPPGTGKTTSALA 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ L YE +Y+ E +D N V+ R T S+P +
Sbjct: 58 LVHDLYGENYE----------QYLLELNASDE--RGIDVIRNKVKEFAR-TVTPGSVPFK 104
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ +L+D+ A + LR+ + L +T A C + QS
Sbjct: 105 T-----VLLDEADNMTA-DAQQALRRTMELYTETTRFILA-----CNYLSKIIDPIQSRT 153
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
L P+ + L I +QE + +D++ + GD+R+AI
Sbjct: 154 AL-----------FRFYPLKKEDVISRLEFIMKQEGVQYDPKALDVIYDVTNGDMRKAIN 202
Query: 378 SLQFSS 383
LQ +S
Sbjct: 203 VLQAAS 208
>gi|225684712|gb|EEH22996.1| replication factor C subunit 1 [Paracoccidioides brasiliensis Pb03]
Length = 1066
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 45/264 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW KY P SL + + VE++++W +K F ++I G
Sbjct: 467 RLWTSKYAPTSLNMICGNKTAVEKLQSWLRNWRNSAKADFKKGGKDGTGIYRAVMIHGPP 526
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 527 GIGKTT-----AAHLVAKLENYDVVETNASDTRSKGLLETGLRGVLDTTSLQGY--FSGE 579
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
++ S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 580 GKKVDS--------GKKNLVLIMDEV---DGMSAGDRGGVGALASVAKKTRIPMILICNE 628
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ ++ I+ LS IC +E + + +D
Sbjct: 629 --------RRLPKMRPFDSVTFDLPFRRPTVD-----QIRARLSTICYREGLRIPPQVLD 675
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ 386
+ Q + DIRQ I L + L Q
Sbjct: 676 SLIQGTHADIRQVINMLSTAKLDQ 699
>gi|367009250|ref|XP_003679126.1| hypothetical protein TDEL_0A05830 [Torulaspora delbrueckii]
gi|359746783|emb|CCE89915.1| hypothetical protein TDEL_0A05830 [Torulaspora delbrueckii]
Length = 856
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 37/253 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWF-----EERLG-DSKDKFSTNVL---VITGQA 187
+LW KY P +L+++ + V +++ W R G S + T V ++ G
Sbjct: 291 KLWTVKYAPTNLQQICGNKSSVSKLKNWLTNWEESRRNGFKSAGRHGTGVFRSAMLYGPP 350
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A LG + E + + K L+ S F+
Sbjct: 351 GIGKTTAAHLVAKELGYDILEQNASDVRSKSLLNNGIKNSLDNMSVFGYFK--------- 401
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKA 306
G T PS G + ++++D++ +G + +R L R T P ++ E
Sbjct: 402 GRTDPS--GSNGKKFVIIMDEV---DGMSGGDRGGVGQLASFCRKTSTPMILICNE---- 452
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ +D R+ N SIK L I +E++ L ID + Q
Sbjct: 453 ----RNLPKMRPFDRVCLDVQFRRPDAN-----SIKARLMTIAVREKFKLDPNVIDKLVQ 503
Query: 367 ASGGDIRQAITSL 379
A+ GDIRQ + L
Sbjct: 504 ATRGDIRQIVNLL 516
>gi|296241870|ref|YP_003649357.1| replication factor C large subunit [Thermosphaera aggregans DSM
11486]
gi|296094454|gb|ADG90405.1| replication factor C large subunit [Thermosphaera aggregans DSM
11486]
Length = 430
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+PR++E++ Q W E + K +++ G AG GKT+ V +
Sbjct: 7 WIIKYRPRTIEDVVNQEDAKNAFLNWLENWGKPGQKK----AVLLHGPAGCGKTSLVEAV 62
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G +L+E + ++ K D +E I + + + + G+
Sbjct: 63 ARSKGYQLFEMNAS----------------DFRRKSD-----IESIAKIAAQTSGLTGKR 101
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+L+D++ N R A E + ++ L+ + P +V+T + + +++
Sbjct: 102 K---IILLDEVDGINAR-ADEGGIEAIIELINVSKNP--IVMT------ANNPYSKNLLP 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+ +++ + + ++ + L KIC E+ S E + +A+ S GD+R AI
Sbjct: 150 LRQNVLE-----IPMKRLSETHVVTALKKICGAEKIECSDEALREIAKRSEGDLRSAIND 204
Query: 379 LQ 380
LQ
Sbjct: 205 LQ 206
>gi|344305152|gb|EGW35384.1| hypothetical protein SPAPADRAFT_131286 [Spathaspora passalidarum
NRRL Y-27907]
Length = 520
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 135/342 (39%), Gaps = 82/342 (23%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W +KY P S ++ + K+ +VR + + ++ VLV++G +G K+ T + +
Sbjct: 45 WIDKYAPISTSDICINPTKLTQVRNALTSMINHTS---TSRVLVLSGPSGCSKSTTAKLL 101
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR-RYGSTSPSIPGE 257
A +E + + +EY D E+F+ R R G P++
Sbjct: 102 A------------------KELIDSSDCLVEYNETFD-IEDFLSNCRYRIG---PNL--- 136
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCL--LLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
A++LI++LP E+ R L + P + LTE + +S
Sbjct: 137 ----AVVLIEELPNVFHAPTLEKFRNSLQQWISYDGELPPLVICLTEIEYGE-----GES 187
Query: 316 FEELQSIL-VD--------AGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA- 365
+ +++ L VD + + NP+ + +T+S I + E ++ L +
Sbjct: 188 WYNIENTLTVDTVFGRSLASQMNIIKFNPLAVRFLNKTISNIVKNEPVFNKINKVKLKSV 247
Query: 366 ---QASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETL 422
GDIR I++LQ ++ + L R+ +
Sbjct: 248 LDQMYKVGDIRSIISNLQLWTILNSDTVCL-------------------------RENQI 282
Query: 423 SLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSR----LPL 460
+LFHA+GK L++ E ++ K D D + S+ LPL
Sbjct: 283 NLFHAIGKILYSSSEFTHMNKEDVDHHSIDQVLSQFQDNLPL 324
>gi|448485438|ref|ZP_21606663.1| replication factor C large subunit [Halorubrum arcis JCM 13916]
gi|445818092|gb|EMA67959.1| replication factor C large subunit [Halorubrum arcis JCM 13916]
Length = 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 83/378 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A F ++ L +A +++ ++ SI L +CR+E ++ + +A+
Sbjct: 147 -----ANDFYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDVCRKEGIEFESDALQRIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D SI+ + + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATQGRD-------SITVEDV------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPV--LDFL-H 484
L L + + L Q A+ V + L + E L + A V DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLARWI---ENNLLDVYEPAEAVRAYDFLAN 294
Query: 485 ENCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 295 ADVWLGRVRATQNYSYWR 312
>gi|71662470|ref|XP_818241.1| replication factor C, subunit 1 [Trypanosoma cruzi strain CL
Brener]
gi|70883481|gb|EAN96390.1| replication factor C, subunit 1, putative [Trypanosoma cruzi]
Length = 582
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 57/306 (18%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQ 186
+ + +++ + WAEKYKP+++ ++ +++AW E G S+ + + +++G
Sbjct: 3 AVTNAANVGEPWAEKYKPKTIAQMCYP-SSANKLKAWIETFDSGSSRMRAA----LLSGP 57
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
GVGKT +V +A LG + E++ + + K+ E+ + F
Sbjct: 58 PGVGKTTSVYVVARELGRIVVEYNA-------SHFRSGKSLREHVTVSINNNTF------ 104
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
++ S + +ILL+D++ + E ++ + ++T IP ++ C
Sbjct: 105 ------NMNASSYAKSILLMDEVDGCDIGGVKE-----IIEMTKTTKIP---IVCTCN-- 148
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D Q L + + D + N + N + L++ E SLS + + + Q
Sbjct: 149 ---DRWNQKLRPLLNYVEDFRVSRPPCNIVANYLCDKVLAR----EGISLSKQLLQDIIQ 201
Query: 367 ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFH 426
SG DIR + +LQ L + + E+KA ++Q +D + LF
Sbjct: 202 RSGSDIRSMLNNLQMWCLNRTSL-------------EQKA--LAACAVQSAKDGDVGLFD 246
Query: 427 ALGKFL 432
A FL
Sbjct: 247 AAEMFL 252
>gi|384252312|gb|EIE25788.1| putative replication factor C 37 kDa subunit [Coccomyxa
subellipsoidea C-169]
Length = 329
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 50/272 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTAT 194
Q W +KY+P+S+ E+A Q + V ++ E S N+ L+ G G GKT+T
Sbjct: 6 QPWVDKYRPKSVNEVAHQEEVVHTLQKALE----------SANLPHLLFYGPPGTGKTST 55
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPS 253
+A L P + + + E + + N V E+I+ + +TS
Sbjct: 56 ALAMARQLYG---------PELAKARVK------ELNASDERGINVVREKIKSFAATSVG 100
Query: 254 --IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+PG LLI D + A LR+ + H + C +
Sbjct: 101 QPVPGYPCPPFKLLILDEADAMTQDAQNALRRTM-----EAHSKVTRFIFICNYVSRI-- 153
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
E L S K P+ G + +S IC +E L ++ + + SGGD
Sbjct: 154 ----IEPLASRCA-----KFRFRPLHGGIMSARISHICNEEGVQLQEGAMETLGKVSGGD 204
Query: 372 IRQAITSLQ----FSSLKQDPMLNLSLSISKP 399
+R+AIT+LQ L+ +P L +S + P
Sbjct: 205 LRKAITTLQSAVRLKGLQVEPQTLLDVSGAVP 236
>gi|448453326|ref|ZP_21593769.1| replication factor C large subunit [Halorubrum litoreum JCM 13561]
gi|445807646|gb|EMA57729.1| replication factor C large subunit [Halorubrum litoreum JCM 13561]
Length = 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 83/378 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A F ++ L +A +++ ++ SI L +CR+E ++ + +A+
Sbjct: 147 -----ANDFYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDVCRKEGIEFESDALQRIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D SI+ + + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATQGRD-------SITVEDV------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPV--LDFL-H 484
L L + + L Q A+ V + L + E L + A V DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPEDLARWI---ENNLLDVYEPAEAVRAYDFLAN 294
Query: 485 ENCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 295 ADVWLGRVRATQNYSYWR 312
>gi|389744152|gb|EIM85335.1| DNA replication factor C large subunit [Stereum hirsutum FP-91666
SS1]
Length = 804
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 36/261 (13%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STNV-- 180
A + QLW ++Y P++L+E+ + +VE ++ W K F N+
Sbjct: 219 AKVVDAKTQLWTDRYAPQTLKEICGNKAQVERLQNWLSSWPNSLKANFKKPGKDGMNIFR 278
Query: 181 -LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
++++G G+GKT + +A G E + + T ++ + N T + TS LD +
Sbjct: 279 GVMLSGPPGIGKTTSAHLVAKLAGFTPIELNA-SDTRSKKLVENS-TNITNTS-LDGWMG 335
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAV 298
E + G IP KS L++D++ +G +A +R L L++ T IP
Sbjct: 336 GGEMMNAAG-----IPITDKS--CLIMDEV---DGMSAGDRGGVGALAALIKKTKIPIIC 385
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+ D +AQ + L ++ D RK +I+ + I +E+ +
Sbjct: 386 IAN--------DRSAQKMKPLTNVTFDLKFRKP-----DAAAIRSRMLTIAFKEKMKIPA 432
Query: 359 EQIDLVAQASGGDIRQAITSL 379
ID + DIRQ + L
Sbjct: 433 NVIDQLVTGVNSDIRQVLNML 453
>gi|321264327|ref|XP_003196881.1| DNA replication activator 1 subunit1 (Replication factor C subunit
1) [Cryptococcus gattii WM276]
gi|317463358|gb|ADV25094.1| DNA replication activator 1 subunit1 (Replication factor C subunit
1), putative [Cryptococcus gattii WM276]
Length = 991
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 35/256 (13%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVIT 184
++ QLW KY P SL+E+ + VE + W ++ + K F ++I+
Sbjct: 407 ASAQLWTTKYAPTSLKEICGNKAPVERLGQWLKDWQNNYKANFKKPGKDGMGIYRAVLIS 466
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G G+GKT + +A G E + + T ++ + N +T ++ S LD F
Sbjct: 467 GPPGIGKTTSAHLMAKEAGYTPLELNA-SDTRSKKLIEN-ETNVDNKS-LDGF------F 517
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTEC 303
+ G + + + S L++D++ +G +A +R L L+R T IP ++ C
Sbjct: 518 KGQGIGTNAAGLKIGSRTCLIMDEV---DGMSAGDRGGVGALNTLIRKTKIPMILI---C 571
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
D T Q + LQS + R+ N I+ + I +E+ + +D
Sbjct: 572 N-----DRTLQKMKPLQSTTFNMTFRRPQPN-----EIRSRIMSILHKEKLKIPPNVVDE 621
Query: 364 VAQASGGDIRQAITSL 379
+ + DIRQ + L
Sbjct: 622 LIKGVNSDIRQVLNML 637
>gi|297620228|ref|YP_003708333.1| AAA ATPase central domain-containing protein [Methanococcus voltae
A3]
gi|297379205|gb|ADI37360.1| AAA ATPase central domain protein [Methanococcus voltae A3]
Length = 510
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+S+ ++A Q K E++ W EE + ++ L++ G G GKT +
Sbjct: 3 WVEKYRPKSMNDVAGQNKTKEQLITWIEEYI---QNGGYHKPLLLAGPPGCGKTTLAYAL 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ Y ++ +E + +N ++++ + S S+ G
Sbjct: 60 AND-----YNFEV----------------IELNASDKRNKNVIQQVVGTAAVSKSLSG-- 96
Query: 259 KSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ S I+L +D L + R ++ + ++ P ++L TA
Sbjct: 97 RRSLIILDEVDGLSGNDDRGGVSE----IIKVAKTAKNP--IIL-----------TANDP 139
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+L + V ++ + SI L KI QE Y + + I ++A + GD+R AI
Sbjct: 140 YKLNLSTLRNSVHLVNVSSVHTNSIPPVLRKIALQEGYEVDPKAIKMIASHASGDLRAAI 199
Query: 377 TSLQ 380
L+
Sbjct: 200 NDLE 203
>gi|134046379|ref|YP_001097864.1| replication factor C large subunit [Methanococcus maripaludis C5]
gi|166977384|sp|A4FZL6.1|RFCL_METM5 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|132664004|gb|ABO35650.1| replication factor C large subunit [Methanococcus maripaludis C5]
Length = 484
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL ++A K + + W E + K K +++ G G GKT
Sbjct: 4 WVEKYRPKSLNDVAGHNKTKQALINWIESFVNGQKQK----PILLAGPPGSGKTTL---- 55
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
+H A+ Y +D +E + ++ + ++ +TS S+ G
Sbjct: 56 -AHAIAKDYAFDV----------------IELNASDKRNKDVIAQVVGTAATSKSLTG-- 96
Query: 259 KSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K + I+L +D L + R + + L ++ P V+LT A+ V A
Sbjct: 97 KRTLIVLDEVDGLSGNDDRGGVAEIIKVL----KTAENP--VILT----ANDVYKPALMT 146
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L++ G+ + SI L KI +E + + + I +A SGGD+R AI
Sbjct: 147 LRNNVNLINVGS-------VHTNSIPPVLRKIALKEGFEIDEKVIKTIASHSGGDLRAAI 199
Query: 377 TSLQ 380
LQ
Sbjct: 200 NDLQ 203
>gi|448504659|ref|ZP_21614000.1| replication factor C large subunit [Halorubrum distributum JCM
9100]
gi|448519106|ref|ZP_21617882.1| replication factor C large subunit [Halorubrum distributum JCM
10118]
gi|445701869|gb|ELZ53841.1| replication factor C large subunit [Halorubrum distributum JCM
9100]
gi|445704122|gb|ELZ56040.1| replication factor C large subunit [Halorubrum distributum JCM
10118]
Length = 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 83/378 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A F ++ L +A +++ ++ SI L +CR+E ++ + +A+
Sbjct: 147 -----ANDFYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDVCRKEGIEFESDALQRIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D SI+ + + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATQGRD-------SITVEDV------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHGQARPV--LDFL-H 484
L L + + L Q A+ V + L + E L + A V DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLTRWI---ENNLLDVYEPAEAVRAYDFLAN 294
Query: 485 ENCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 295 ADVWLGRVRATQNYSYWR 312
>gi|159905016|ref|YP_001548678.1| replication factor C large subunit [Methanococcus maripaludis C6]
gi|226739139|sp|A9A6N2.1|RFCL_METM6 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|159886509|gb|ABX01446.1| AAA ATPase central domain protein [Methanococcus maripaludis C6]
Length = 484
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 96/242 (39%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL ++A K E + W E + K K +++ G G GKT I
Sbjct: 4 WVEKYRPKSLNDVAGHNKTKETLIEWIESFVSGQKQK----PILLAGPPGSGKTTLAYAI 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A Y +D +E + ++ + ++ +TS SI G
Sbjct: 60 AKD-----YAYDV----------------IELNASDKRNKDVISQVVGTAATSKSITGRR 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ +D L + R + + L ++ P V+LT A+ V A
Sbjct: 99 TLIVLDEVDGLSGNDDRGGVAEIIKVL----KTAENP--VILT----ANDVYKPALMTLR 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ G+ + SI L KI +E + + + I +A +GGD+R AI
Sbjct: 149 NNVNLINVGS-------VHTNSIPPVLRKIALKEGFEIDEKVIKTIASHAGGDLRAAIND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|358386822|gb|EHK24417.1| hypothetical protein TRIVIDRAFT_168290 [Trichoderma virens Gv29-8]
Length = 1045
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 41/273 (15%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFS 177
A + + L KY P L + + +VE+++ W F+ R D
Sbjct: 451 AEPARAPDVLLTSKYAPTQLNHICGNKAQVEKIQNWLRNWPKSKKYNFQRRGADGMG--G 508
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
++I+G G+GKT A+HL A+L +D + + + ++ + + +
Sbjct: 509 ERAIIISGPPGIGKT-----TAAHLAAKLEGYD-----VLESNASDTRSKKLVEAGVSDV 558
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPT 296
N + + S+ +K +L++D++ +G +A +R L R T +P
Sbjct: 559 MNNTSLLGFFAGDGKSV-DATKKKIVLIMDEV---DGMSAGDRGGVGALAKFCRKTEVPL 614
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ E + +++ D A + N T ++ + IC +E L
Sbjct: 615 ILICNE-----------RKLPKMKPF--DHAAFDIRFNRPTVDQVRSRIMTICHREGLKL 661
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+D + + S DIRQ I + + L Q M
Sbjct: 662 PPPVVDALIEGSNKDIRQIINMISTAKLDQSSM 694
>gi|170106533|ref|XP_001884478.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640824|gb|EDR05088.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 950
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 45/281 (16%)
Query: 125 DHDSASASSS---TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF----- 176
DH +A + + + QLW +Y P+SL+E+ + +VE+++ W + K F
Sbjct: 398 DHIAAQSGKTIDPSTQLWTTRYAPQSLKEVCGNKSQVEKLQLWLHDWPNSLKSGFKKPGK 457
Query: 177 -STNV---LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN--CKTGLEY 230
NV ++ITG G+GKT + +HL A+L E TP + + G+
Sbjct: 458 NGMNVFRSVLITGSPGIGKTTS-----AHLCAKL-EGFTPIELNASDARSKKLVENGMNI 511
Query: 231 TSK-LDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLL 288
+K LD + N G + L++D++ +G +A +R L L
Sbjct: 512 NNKSLDGYINGAHDTNSLGV-------QITDKTCLIMDEV---DGMSAGDRGGVGALNAL 561
Query: 289 VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI 348
++ T IP + D AQ + L + + +K +N SI+ + I
Sbjct: 562 IKKTKIPIICIAN--------DRQAQKLKPLVATTFNLTFQKPQVN-----SIRSRILTI 608
Query: 349 CRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+E+ + ID + + DIRQ + L L D M
Sbjct: 609 AFKEKMKIPANVIDQLITGTQSDIRQVLNMLSTWKLSNDAM 649
>gi|257387805|ref|YP_003177578.1| replication factor C large subunit [Halomicrobium mukohataei DSM
12286]
gi|257170112|gb|ACV47871.1| AAA ATPase central domain protein [Halomicrobium mukohataei DSM
12286]
Length = 497
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E+Y+P +L E+ K + +R W E + +++ G G+GKT+ +
Sbjct: 4 WTERYRPTTLAEVRGNDKARDALREWAESW------EDHREAVILHGAPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + EW PTI E + ++ +E++ + S ++
Sbjct: 58 ANDM-----EW----PTI------------ELNASDSRTKDVIEKVAGEAAKSGTLTAGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ + P ++ E F E
Sbjct: 97 AGRRLVVMDEADNIHGNADRGGAR-AITSLVKEANQPMILIANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L +A + + SI L + RQE+ + E + +A+ + GD+R AI
Sbjct: 143 MSNGLRNA-CDDIEFRDVGKRSIVPVLRDVLRQEEIAFDDEALTEIAEMNDGDLRGAIKD 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|315230689|ref|YP_004071125.1| replication factor C large subunit [Thermococcus barophilus MP]
gi|315183717|gb|ADT83902.1| replication factor C large subunit [Thermococcus barophilus MP]
Length = 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 46/242 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L E+ QR+ +E+V AW ++ + + K L++ G G GKT TV +
Sbjct: 5 WVEKYRPKRLREIVNQRQALEKVEAWIKQWVHGTPKK---KALLLAGPPGSGKTTTVYAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + E + E E+IRRY + ++
Sbjct: 62 ANEYKFEVIELNASD------------------------ERTFEKIRRYLDAAYTMDIFG 97
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++ +D+ A E + L+ P ++ K V + ++ E
Sbjct: 98 RRRKLIFLDEADNIEPSGAHE-----IAKLIDRARNP---IIMAANKYWEVPAEIRNKAE 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ V +T I + L +I + E + E + +A+ + GD+R AI
Sbjct: 150 V-----------VEYKRLTQRDIMQALFRIIKAEGIFVPKEIVAEIAKRASGDLRAAIND 198
Query: 379 LQ 380
LQ
Sbjct: 199 LQ 200
>gi|121715788|ref|XP_001275503.1| chromosome transmission fidelity factor [Aspergillus clavatus NRRL
1]
gi|119403660|gb|EAW14077.1| chromosome transmission fidelity factor [Aspergillus clavatus NRRL
1]
Length = 1068
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST--------- 178
S+ A+ + QLW KY P S+ + + VE++++W + ++K FS
Sbjct: 471 SSQAARTDDQLWTAKYAPTSINMICGNKTAVEKLQSWLHDWHKNAKVNFSRPGKDGSGIY 530
Query: 179 NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
++I G G+GKT + +HL A++ +D + + + ++ S L +
Sbjct: 531 RAVMIHGPPGIGKTTS-----AHLVAKIEGFD-----VVETNASDTRSKKLVESGLGDIL 580
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTA 297
+ ++ Y S+ +K + +L++D++ +G +A +R L + + THIP
Sbjct: 581 DTTS-LQGYFSSEGKKVDSAKKNLVLIMDEV---DGMSAGDRGGVGALAAIAKKTHIPLI 636
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
++ E + +++ D ++ T I+ LS IC +E +
Sbjct: 637 LICNE-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLKIP 683
Query: 358 TEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
+D + + + DIRQ I L L Q
Sbjct: 684 PPVLDGLIEGTNSDIRQVINMLSTVKLDQ 712
>gi|400600327|gb|EJP68001.1| replication factor RFC1 C terminal domain-containing protein
[Beauveria bassiana ARSEF 2860]
Length = 1026
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 109/270 (40%), Gaps = 41/270 (15%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNV 180
S + QL KY P L + + +VE+++AW F++R D
Sbjct: 444 SDTPTQLLTSKYAPTQLNHICGNKGQVEKIQAWLRNWPKAKKYNFQKRGADGMG--GERA 501
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++I+G G+GKT A+HL A+L +D + + + ++ + + + N
Sbjct: 502 IIISGPPGIGKT-----TAAHLAAKLEGYD-----VLESNASDARSKRLVEAGVTDVMNN 551
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVV 299
+ + S+ +K +L++D++ +G + +R + + T IP ++
Sbjct: 552 TSLLGFFAGDGKSV-DITKKKIVLIMDEV---DGMSGGDRGGVGAMAKFCKKTEIPLILI 607
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
E + +++ D A V N T ++ + IC +E L
Sbjct: 608 CNE-----------RRLPKMKPF--DHVAFDVRFNRPTVDQVRSRIMTICHREGLKLPPP 654
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+D + + S DIRQ I + + L Q M
Sbjct: 655 VVDALIEGSNKDIRQIINMISTAKLDQTSM 684
>gi|14590059|ref|NP_142123.1| replication factor C large subunit [Pyrococcus horikoshii OT3]
gi|42559336|sp|O57853.1|RFCL_PYRHO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|3256499|dbj|BAA29182.1| 468aa long hypothetical replication factor C subunit [Pyrococcus
horikoshii OT3]
Length = 468
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 93/242 (38%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q + +E+VRAW E L + K L++ G G GKT TV +
Sbjct: 6 WIEKYRPRKLSEIVNQEQALEKVRAWIESWLHGNPPK--KKALLLAGPPGSGKTTTVYAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A + E + E +I RY + ++
Sbjct: 64 AHEYNFEVIELNASD------------------------ERTYNKIARYVQAAYTMDIMG 99
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+ +D+ N + + P L + + + + A + E
Sbjct: 100 KRRKIIFLDE--ADN---------------IEPSGAPEIAKLIDKAR-NPIIMAANHYWE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + D A V + + L +I ++E ++ E + +A+ S GD+R AI
Sbjct: 142 VPKEIRDR-AELVEYKRLNQRDVISALVRILKREGITVPKEILTEIAKRSSGDLRAAIND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|241959612|ref|XP_002422525.1| replication factor C subunit, putative [Candida dubliniensis CD36]
gi|223645870|emb|CAX40533.1| replication factor C subunit, putative [Candida dubliniensis CD36]
Length = 323
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ LE++ + VE ++ ++ G+ + ++++G G+GKT ++ +
Sbjct: 11 WVEKYRPKKLEDIVGNEETVERLKLIVQD--GNMPN------MILSGLPGIGKTTSIHCL 62
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK--LDEFENFVERIRRYGSTSPSIPG 256
A L + +EY H L + +D N +I+++ T S+P
Sbjct: 63 AYEL-------------LGEEYYHQATMELNASDDRGIDVVRN---KIKQFAQTKISLP- 105
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I+L + +T G A + LR+ + + +T A C ++ +
Sbjct: 106 PGRQKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CNQSSKI------I 152
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E LQS + N +++ + L +I + E +TE + + + GD+RQAI
Sbjct: 153 EPLQS-----RCAILRYNRLSDEEVLARLLEIIKMEDVQYNTEGLQALVFTAEGDMRQAI 207
Query: 377 TSLQ 380
+LQ
Sbjct: 208 NNLQ 211
>gi|255946327|ref|XP_002563931.1| Pc20g14550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588666|emb|CAP86784.1| Pc20g14550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1053
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 117/292 (40%), Gaps = 53/292 (18%)
Query: 117 RFEGLVNPDHDSASAS--------SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEER 168
R + P +A+AS +S+ LW KY P S+ + + VE+++ W
Sbjct: 444 RKTAMAQPSKTAATASQTPPSPQPASSGDLWTTKYAPTSISMICGNKGAVEKIQTWLRNW 503
Query: 169 LGDSKDKFSTN---------VLVITGQAGVGKTATVRQIASHLGARLYEWDT----PTPT 215
++ F ++I G G+GKT A+HL A+L +D + T
Sbjct: 504 HASAQADFKKGGKDGSGIYRAVIIHGPPGIGKT-----TAAHLVAKLEGFDVVETNASDT 558
Query: 216 IWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGR 275
++ + + G+ T+ L + F ++ S K +L++D++ +G
Sbjct: 559 RSKKLVESSTLGVLDTTSLQGY--FAGHGKQVES--------EKRKLVLIMDEV---DGM 605
Query: 276 TAFERLR-QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALN 334
+A +R + +V+ T IP ++ E Q + I D R+
Sbjct: 606 SAGDRGGVGAVAAIVKKTKIPVILICNE--------RKIQKMKPFDFITYDVPFRRP--- 654
Query: 335 PITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
T I+ LS IC +E + +D + + + DIRQ I L + L Q
Sbjct: 655 --TAEQIRARLSTICFREGLKIPPPVLDGLIEGTHADIRQVINMLSTARLDQ 704
>gi|82541068|ref|XP_724804.1| replication factor C, 140 kDa subunit [Plasmodium yoelii yoelii
17XNL]
gi|23479576|gb|EAA16369.1| replication factor C, 140 kDa subunit [Plasmodium yoelii yoelii]
Length = 888
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 106/263 (40%), Gaps = 50/263 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFE---------------ERLGDSKDKFSTNVL 181
QLW +KYKP LE+L + V +++ W + + + +
Sbjct: 336 QLWVDKYKPTKLEDLVGNTQNVFKLKTWLSSWDDVCIKGLKKQVTKTFRGNFENINAKCA 395
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+++G AG+GKT T + ++ G + E++ K +E S++
Sbjct: 396 LLSGPAGIGKTTTAKIVSMDSGYNVIEFNASD--------ERNKAAVEKISEM------- 440
Query: 242 ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER-LRQCLLLLVRSTHIPTAVVL 300
G + S+ +S +++D++ +G ++ ++ +L L+ T P +
Sbjct: 441 ---ATGGYSITSLNNKSLKKTCIIMDEV---DGMSSGDKGGSSAILKLIEKTKCPIICI- 493
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
C D L + D P N +KR L +IC+ E +
Sbjct: 494 --CN-----DRQNSKMRTLANKCYDLK----FTTPNKNSVVKRLL-EICKNENLMMEPNA 541
Query: 361 IDLVAQASGGDIRQAITSLQFSS 383
++L+ ++S GDIRQ + +LQ S
Sbjct: 542 LELLWESSNGDIRQILNALQLLS 564
>gi|18376023|emb|CAB91757.2| related to replication factor C protein [Neurospora crassa]
Length = 1092
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFS 177
A+ + QLW KY P ++ ++ + VE+++ W F++R D +
Sbjct: 480 AALPPPSSQLWTTKYAPTAMNQICGNKANVEKIQNWLKNWPKSRKYNFQKRGADGSGGY- 538
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
++I+G G+GKT A+HL A++ +D + + + ++ S + E
Sbjct: 539 -RAIIISGPPGIGKT-----TAAHLAAKMEGYD-----VIESNASDTRSKKLIESGVSEV 587
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPT 296
+ +G K +L++D++ +G +A +R + + T +P
Sbjct: 588 MTNTSLLGFFGGDGKHADAR-KKKIVLVMDEV---DGMSAGDRGGVGTMAKFCKKTEVPL 643
Query: 297 AVVLTE--CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
++ E K D A + Q VD I+ + IC +E
Sbjct: 644 ILICNERRLPKMKPFDHVAFDI-KFQRPTVD--------------QIRSRIMTICHREGL 688
Query: 355 SLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+ ++ + + SG DIRQ I + + L Q M
Sbjct: 689 KIPPPVVNALIEGSGRDIRQIINMISTAKLDQTTM 723
>gi|395646102|ref|ZP_10433962.1| Replication factor C [Methanofollis liminatans DSM 4140]
gi|395442842|gb|EJG07599.1| Replication factor C [Methanofollis liminatans DSM 4140]
Length = 332
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 111/271 (40%), Gaps = 57/271 (21%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTATV 195
LW+EKY+P +LE + Q + V + ++ E S NV L+I G G GK+ V
Sbjct: 2 LWSEKYRPSTLEGVLGQEEAVRVLSSFAE----------SGNVPHLLIVGPTGTGKSIAV 51
Query: 196 RQIASHL-GARLYEWDTPTPTIWQEYMHNCKTGLE------YTSKLDE--FENFVERIRR 246
+A L GA E T P + K LE + K DE NF ++
Sbjct: 52 EALARTLYGANWQENTTVFPA--ADLFEQGKKYLEADERFGHIYKKDESFLTNFKYLVKW 109
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTAVVLTECG 304
Y + P G L V G +A R Q L ++ R + V LT G
Sbjct: 110 YAAIRPLDAGFK----------LMVFEGASAISREAQQGLRRIMERYSGTCRFVFLTTNG 159
Query: 305 KADSVDSTAQSFEELQSILVDAGARK---VALNPITNGSIKRTLSKICRQEQYS---LST 358
A ++ A A + + P+ + I+R L+ I E + +S
Sbjct: 160 SA----------------IIPAIASRCLPITFVPVDDDLIRRRLTAILEGEGVAADRVSA 203
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+ +DL+ A+GGD+R+A LQ + + P+
Sbjct: 204 DDLDLIVPAAGGDLRRATILLQVFAESKGPV 234
>gi|358399726|gb|EHK49063.1| hypothetical protein TRIATDRAFT_289887 [Trichoderma atroviride IMI
206040]
Length = 1033
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 42/274 (15%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITGQ 186
L KY P L ++ + +VE+++ W F+ R D ++I+G
Sbjct: 449 LLTSKYAPTQLNQICGNKAQVEKIQNWLRNWPKSKKYNFQRRGADGMG--GERAIIISGP 506
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT A+HL A+L +D + + + ++ + + + N +
Sbjct: 507 PGIGKT-----TAAHLAAKLEGYD-----VLESNASDTRSKKLVETGVSDVMNNTSLLGF 556
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGK 305
+ S+ +K +L++D++ +G +A +R L R T +P ++ E
Sbjct: 557 FAGDGKSV-DNAKKKIVLIMDEV---DGMSAGDRGGVGALAKFCRKTEVPLILICNE--- 609
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ +++ D A + N T ++ + IC +E L +D +
Sbjct: 610 --------RRLPKMKPF--DHAAFDIRFNRPTVDQVRSRIMTICHREGLKLPPPVVDALI 659
Query: 366 QASGGDIRQAITSLQFSSLKQDPM-LNLSLSISK 398
+ S DIRQ I + + L Q M + S ++SK
Sbjct: 660 EGSNKDIRQIINMISTAKLDQSSMSFDQSKAMSK 693
>gi|346972444|gb|EGY15896.1| replication factor C subunit 1 [Verticillium dahliae VdLs.17]
Length = 1040
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 108/270 (40%), Gaps = 41/270 (15%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNV 180
++ QLW KY P L + + +VE+++ W F++R D +
Sbjct: 450 AAPVAQLWTSKYAPTQLSHICGNKAQVEKIQNWLKNWQKSRKWDFQKRGADGMG--AERA 507
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++I+G G+GKT A+HL A+L +D + + + ++ + E N
Sbjct: 508 IIISGPPGIGKT-----TAAHLAAKLEGFD-----VIESNASDTRSKRLVEEGVSEVMNN 557
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVV 299
+ + + K + +L++D++ +G +A +R L + T +P ++
Sbjct: 558 TSLLGFFSGDGKKLDA-GKKNIVLIMDEV---DGMSAGDRGGVGALAKYCKKTEVPLILI 613
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
E + + +D R+ ++ ++ + IC +E L
Sbjct: 614 CNE--------RRLPKMKPFDHVAMDIQFRRPTVD-----QVRSRIMTICHREGLKLPPP 660
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+D + + S DIRQ I + + L Q M
Sbjct: 661 VVDALIEGSNKDIRQIINMISTAKLDQSAM 690
>gi|257054072|ref|YP_003131905.1| replication factor C large subunit [Halorhabdus utahensis DSM
12940]
gi|256692835|gb|ACV13172.1| AAA ATPase central domain protein [Halorhabdus utahensis DSM 12940]
Length = 507
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E ++P +L E+ K + +R W E D ++ +V+ G G+GKT+
Sbjct: 4 WTEIHRPSTLAEVRGNDKARDALREWAES-WPDHRE-----AVVLYGSPGIGKTS----- 52
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+H A +W PTI E + ++ +E++ + S ++
Sbjct: 53 AAHALANDMDW----PTI------------ELNASDSRTKDVIEQVAGEAAKSGTLAQGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E F E
Sbjct: 97 SGRRLVILDEADNLHGNVDRGGTR-AITSLVKEAQQPIVLIANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A R + ++ SI L ICRQE E + +A+ + GD+R AI
Sbjct: 143 MSKGLRNA-CRDIEFRDVSTRSIVPVLRDICRQEDVGFEKEALRKIAEMNDGDLRGAIND 201
Query: 379 LQFSSLKQDPM 389
LQ + +D +
Sbjct: 202 LQAIAEGRDTV 212
>gi|126458632|ref|YP_001054910.1| replication factor C large subunit [Pyrobaculum calidifontis JCM
11548]
gi|158513487|sp|A3MS27.1|RFCL_PYRCJ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|126248353|gb|ABO07444.1| transcriptional regulator, Fis family [Pyrobaculum calidifontis JCM
11548]
Length = 421
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 55/258 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAW----------FEERLGDSKDK--FSTNVLVITGQ 186
W EKY+P+S E+ Q + + + +W F R +DK +++ G
Sbjct: 5 WVEKYRPKSFSEIVNQEEAKQILASWICTRFKAPQEFCARWAKRRDKEIKEARAVLLWGP 64
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT V +A +G L E + + +TG ERIR+
Sbjct: 65 PGIGKTTLVHALAKEIGYELVELNA----------SDVRTG--------------ERIRQ 100
Query: 247 Y---GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC 303
G S+ G + I+L D++ + + L + +L L+ + +P +VLT
Sbjct: 101 VVGRGLREASLFG--YAGKIVLFDEVDGLHVKEDLGGL-EAILNLIETAKVP--IVLT-- 153
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
+ D + ++ + V L ++ + L +IC E E +
Sbjct: 154 -ANNPFDPKLRPLRDISLV--------VGLKRLSEDEVVEVLKRICASEGAKCEEEALRS 204
Query: 364 VAQASGGDIRQAITSLQF 381
+A++S GD+R AI LQ
Sbjct: 205 LAKSSYGDLRAAINDLQL 222
>gi|164424568|ref|XP_963539.2| hypothetical protein NCU06767 [Neurospora crassa OR74A]
gi|157070569|gb|EAA34303.2| hypothetical protein NCU06767 [Neurospora crassa OR74A]
Length = 1086
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFS 177
A+ + QLW KY P ++ ++ + VE+++ W F++R D +
Sbjct: 474 AALPPPSSQLWTTKYAPTAMNQICGNKANVEKIQNWLKNWPKSRKYNFQKRGADGSGGY- 532
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
++I+G G+GKT A+HL A++ +D + + + ++ S + E
Sbjct: 533 -RAIIISGPPGIGKT-----TAAHLAAKMEGYD-----VIESNASDTRSKKLIESGVSEV 581
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPT 296
+ +G K +L++D++ +G +A +R + + T +P
Sbjct: 582 MTNTSLLGFFGGDGKHADAR-KKKIVLVMDEV---DGMSAGDRGGVGTMAKFCKKTEVPL 637
Query: 297 AVVLTE--CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
++ E K D A + Q VD I+ + IC +E
Sbjct: 638 ILICNERRLPKMKPFDHVAFDI-KFQRPTVD--------------QIRSRIMTICHREGL 682
Query: 355 SLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+ ++ + + SG DIRQ I + + L Q M
Sbjct: 683 KIPPPVVNALIEGSGRDIRQIINMISTAKLDQTTM 717
>gi|395327638|gb|EJF60036.1| DNA replication factor C, large subunit [Dichomitus squalens
LYAD-421 SS1]
Length = 718
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STNV---LVITGQAG 188
LW +Y P+SL+E+ + +VE+++ W + + +F NV ++ITG G
Sbjct: 147 LWTARYAPQSLKEICGNKGQVEKLQTWLGSWAANVRSEFKKPGKDGMNVFRAVMITGPPG 206
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL--DEFENFVERIRR 246
+GKT + +HL A+L + TP K +E ++ + + ++ ++
Sbjct: 207 IGKTTS-----AHLCAKLAGF---TPVELNASDARSKKLVENSTNIMNTSLDGWMSGGQK 258
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGK 305
+ +I +S L++D++ +G +A +R L+ L++ T IP + + G
Sbjct: 259 TNAAGVTITDKS----CLIMDEV---DGMSAGDRGGVGALVALIKRTKIPIICIANDRG- 310
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
AQ + L S + R+ +N ++ + I +E + +D +
Sbjct: 311 -------AQKLKPLVSATYNLTFRRPEVN-----MVRSRIMSILFKEGMKIPANVVDQLV 358
Query: 366 QASGGDIRQAITSLQFSSLKQDPM 389
Q + DIRQ + L L + M
Sbjct: 359 QGAQADIRQVLNMLSTWRLANNTM 382
>gi|357608191|gb|EHJ65870.1| putative replication factor C large subunit [Danaus plexippus]
Length = 989
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 48/268 (17%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEV-------RAWFEERL---------GD 171
S S S +W +KYKP++L+++ Q + V + W+ R
Sbjct: 430 SCSTEVSNSLMWVDKYKPKNLKQIIGQHGEASNVNKLLNWLKKWYANRKAKLPKPSPWAK 489
Query: 172 SKDKFSTNVLVITGQAGVGKTATVRQIASHLG---ARLYEWDTPTPTIWQEYMHNCKTGL 228
+ D +++G GVGKT TV + LG L DT + T+ +E + L
Sbjct: 490 NDDGGYYRAALLSGPPGVGKTTTVSLVCKELGFDTVELNASDTRSKTLLKEQLGE----L 545
Query: 229 EYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLL 288
T+ L + +T + G +L++D++ G L++ L+ L
Sbjct: 546 LSTNTLQAY-----------ATGCAGKGAVSKKHVLVMDEVDGMAGNEDRGGLQE-LISL 593
Query: 289 VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI 348
+++T +P V+ C D ++ L + D + L IK + I
Sbjct: 594 IKTTSVP---VICMCN-----DRNSEKMRSLVNYCYDLKFARPRLE-----QIKSAMMSI 640
Query: 349 CRQEQYSLSTEQIDLVAQASGGDIRQAI 376
C +E +S E + + +SG DIRQ +
Sbjct: 641 CFKEGIKISPEALSQLIVSSGQDIRQTV 668
>gi|328863808|gb|EGG12907.1| hypothetical protein MELLADRAFT_46497 [Melampsora larici-populina
98AG31]
Length = 937
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 49/257 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
QLW KY P++L EL + +VE ++ W + + K KF+ +V++G
Sbjct: 348 QLWTMKYAPKALNELCGNKTQVERLQTWLRDWPKNRKAKFTKPGKDGLGLYRCIVLSGPP 407
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF--ENFVERIR 245
GVGKT T +HL ++L +D + + N + + KL E ++ +
Sbjct: 408 GVGKTTT-----AHLVSKLEGYD-----VIEMNASNTR-----SKKLLEVGCKDITGNVG 452
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
G S P K +L++D++ +G +A +R L L+R T IP + +
Sbjct: 453 IGGFLESSEPKNEK--LVLIMDEV---DGMSAGDRGGVGALNSLIRKTQIPIIAIANDMS 507
Query: 305 --KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
K + ST S V P N +I+ + I +E+ + ID
Sbjct: 508 IPKMKPLKSTTHSL--------------VFRRPDAN-AIRSRIMCIAFREKLKVPAIAID 552
Query: 363 LVAQASGGDIRQAITSL 379
+ S DIRQ I L
Sbjct: 553 QLVMGSQSDIRQIINML 569
>gi|389851689|ref|YP_006353923.1| replication factor C large subunit [Pyrococcus sp. ST04]
gi|388248995|gb|AFK21848.1| replication factor C large subunit [Pyrococcus sp. ST04]
Length = 481
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L E+ Q + +E+V+AW E L + K L++ G G GKT TV I
Sbjct: 6 WVEKYRPKRLSEIVNQEQAIEKVKAWIESWLHGNPPK--KKALLLAGPPGSGKTTTVYAI 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + E + E E+I RY + ++
Sbjct: 64 ANEYNFEVIELNASD------------------------ERTYEKIARYVQAAYTMDIFG 99
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K ++ +D+ A E + L+ P ++ K V + E
Sbjct: 100 KRRKLIFLDEADNIEPSGAKE-----IAKLIDKARNP---IIMAANKYWEVPKEIREKAE 151
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L V +T + + +I ++E ++ E + +A+ + GD+R AI
Sbjct: 152 L-----------VEYKRLTQRDLMTAMVRILKKEGITIPKEILVEIAKRASGDLRAAIND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|425765331|gb|EKV04031.1| DNA replication factor C subunit Rfc1, putative [Penicillium
digitatum Pd1]
gi|425766812|gb|EKV05409.1| DNA replication factor C subunit Rfc1, putative [Penicillium
digitatum PHI26]
Length = 1055
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 45/272 (16%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE---------RLGDSKDKFSTN 179
+S +S+ LW KY P S + + VE+V++W + G +
Sbjct: 466 SSQPASSGDLWTTKYAPTSTSMICGNKGAVEKVQSWLRNWHASAQADFKKGGKDGSGTYR 525
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLD 235
++I G G+GKT A+HL A+L +D + T ++ + + G+ T+ L
Sbjct: 526 AVIIHGPPGIGKT-----TAAHLVAKLEGFDVVETNASDTRSKKLVESSTLGVLDTTSLQ 580
Query: 236 EFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHI 294
+ F + ++ S K +L++D++ +G +A +R + +V+ T I
Sbjct: 581 GY--FAGQGKQVES--------EKKKLVLIMDEV---DGMSAGDRGGVGAVAAIVKKTKI 627
Query: 295 PTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
P ++ E Q + I D R+ T I+ LS IC +E
Sbjct: 628 PIILICNE--------RKLQKMKPFDFITYDVPFRRP-----TAEQIRARLSTICFREGL 674
Query: 355 SLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
+ +D + + + DIRQ I L + L Q
Sbjct: 675 KIPPPVLDGLIEGTHADIRQVINMLSTARLDQ 706
>gi|328770979|gb|EGF81020.1| hypothetical protein BATDEDRAFT_653 [Batrachochytrium dendrobatidis
JAM81]
Length = 696
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 65/321 (20%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-----RLG---DSKDKFST-NVLV 182
+SS LW +KYKP S E+ + +E++ W + + G D KD +T +
Sbjct: 125 TSSMTPLWVDKYKPISYSEVIGNKGLIEKLSKWLKNWESNRQYGFPKDVKDDSATFRACL 184
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
++G G+GKT + +HL ARL ++D + + + LDE V
Sbjct: 185 LSGSPGLGKTTS-----AHLVARLEDFDV---------VEFNASDVRSKKALDESTGTVS 230
Query: 243 RIRRYGSTSPSIP---GES-------KSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRS 291
+G+ S S+ G+S K +L++D++ +G +A +R L+ +++
Sbjct: 231 IASLFGTASSSLSKVLGKSAAPVNHKKRGRVLIMDEV---DGMSAGDRGGSAELISIIKQ 287
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
T IP ++ C D ++ L + D R+ I+ + IC++
Sbjct: 288 TKIP---IICICN-----DRSSPKIRSLANHCFDLRFRRPDARMIS-----ARVEMICKK 334
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGG 411
E +S I + ++ DIRQ + L L + + + E K
Sbjct: 335 EGLDISPNVIAELVDSTSADIRQILNILSTYKLTNNRL----------TYDEAKT----- 379
Query: 412 FSIQFGRDETLSLFHALGKFL 432
S ++ T+S F +GK L
Sbjct: 380 LSANTRKNSTMSPFDIIGKLL 400
>gi|448671289|ref|ZP_21687228.1| replication factor C large subunit [Haloarcula amylolytica JCM
13557]
gi|445765892|gb|EMA17029.1| replication factor C large subunit [Haloarcula amylolytica JCM
13557]
Length = 508
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W D+ D V +I G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKKW-----ADTWDDHREAV-IIHGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W PTI E + ++ + R+ + S ++
Sbjct: 57 ANDMG-----W----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE +E + +A+ + GD+R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESEALQELAEQNSGDLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|448440147|ref|ZP_21588395.1| replication factor C large subunit [Halorubrum saccharovorum DSM
1137]
gi|445690664|gb|ELZ42874.1| replication factor C large subunit [Halorubrum saccharovorum DSM
1137]
Length = 503
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 145/381 (38%), Gaps = 89/381 (23%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A + ++ L DA +++ ++ SI L +CR+E ++ ++ +A+
Sbjct: 147 -----ANDYYDMARGLRDA-TQEIEFRDVSARSIVPVLRDVCRKESIEFESDALERIAER 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D SI+ + + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATEGRD-------SIAVEDV------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPL-----KMDAPEKVLSQAHGQARPVLDF 482
L L + + L Q A+ V + L +D E + +A DF
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLTKWIENNVLDVYEPM------EAVRAYDF 291
Query: 483 L-HENCWLDIMRQTMFYNLLR 502
L + + WL +R T Y R
Sbjct: 292 LANADVWLGRVRATQNYTYWR 312
>gi|30314655|dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
Length = 1021
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 130/317 (41%), Gaps = 36/317 (11%)
Query: 83 SSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEK 142
+S +QQ K+ P +E + G+ ++P +G + D+ + W EK
Sbjct: 352 NSEKQQKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSLQWTEK 411
Query: 143 YKPRSLEELAVQRKKVEEVRAWFEE---------RLGDSK---DKFSTNVLVITGQAGVG 190
Y+P+ ++ + V+++ W + + G K D + ++++G G+G
Sbjct: 412 YRPKVPNDIVGNQSMVKQLHDWLKSWEDQFLHSGQKGKGKKQADSGAKKAVLLSGPPGIG 471
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
KT T + ++ LG + E + + G ++ + E Y +
Sbjct: 472 KTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKEL--ISNATLNYSNN 529
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTECGKADSV 309
P A+L++D++ +G +A +R L+ ++ + IP ++ C
Sbjct: 530 RLKRP-----KAVLVMDEV---DGMSAGDRGGVADLIASIKMSKIP---IICICN----- 573
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
D +Q + L + + RK T + + L +I ++E ++ +A+
Sbjct: 574 DRYSQKLKSLVNYCLLLNFRKP-----TKQQMGKRLMEIAKKEGLQAQENAMEELAERVH 628
Query: 370 GDIRQAITSLQFSSLKQ 386
GDIR A+ LQ+ SL Q
Sbjct: 629 GDIRMALNHLQYMSLSQ 645
>gi|340623509|ref|YP_004741962.1| replication factor C large subunit [Methanococcus maripaludis X1]
gi|339903777|gb|AEK19219.1| replication factor C large subunit [Methanococcus maripaludis X1]
Length = 486
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL ++A K + + W E +G K +++ G G GKT I
Sbjct: 4 WVEKYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQK----PILLAGPPGSGKTTLAYAI 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ Y +D +E + ++ + ++ +TS S+ G
Sbjct: 60 AND-----YAFDV----------------IELNASDKRNKDVISQVVGTAATSKSLTGRR 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ +D L + R + + L ++ P V+LT A+ V A
Sbjct: 99 TLIVLDEVDGLSGNDDRGGVAEIIKVL----KTAENP--VILT----ANDVYKPALMTLR 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ G+ + SI L +I +E + + + I ++A SGGD+R AI
Sbjct: 149 NSVNLINVGS-------VHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAIND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|118397505|ref|XP_001031085.1| BRCT domain containing protein [Tetrahymena thermophila]
gi|89285407|gb|EAR83422.1| BRCT domain containing protein [Tetrahymena thermophila SB210]
Length = 1123
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE----------------------RLGDSK 173
+Q+W EKY P S+ +K E++ W + + D+
Sbjct: 498 EQIWTEKYAPSSINLCIGNQKNYEKMMEWLHDWVEVVIKGNKKQVKNSFFNRAQGVPDNS 557
Query: 174 DKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK 233
+ +++G G+GKT +VR IA +G + EW+ + ++ ++N L+ S
Sbjct: 558 SNVNAKACLLSGPPGIGKTTSVRLIAKFMGYEIREWNA-SDERNKKSVNNILGDLKSNSI 616
Query: 234 LDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER-LRQCLLLLVRST 292
L+ + + + ++ I+L+D++ +G ++ +R Q L+ +++T
Sbjct: 617 LNLLKKNNTSDQTNNKADDEVEAKTNKKFIILMDEV---DGMSSGDRGGNQALIDAIKNT 673
Query: 293 HIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
++P + C D L + D K A + + + +C QE
Sbjct: 674 NVPIFCI---CN-----DRMNPKIRSLANHCYDIKFIKPAKQDVA-----KYMKNVCEQE 720
Query: 353 QY-SLSTEQIDLVAQASGGDIRQAITSLQF 381
+ + E ++ +++ G D+RQ + L+
Sbjct: 721 GFKDVEIESLEAISERFGNDLRQTLNFLEM 750
>gi|401825233|ref|XP_003886712.1| replication factor C large subunit [Encephalitozoon hellem ATCC
50504]
gi|395459857|gb|AFM97731.1| replication factor C large subunit [Encephalitozoon hellem ATCC
50504]
Length = 385
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 61/244 (25%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
Q+W EKY+PR +L + +V W + + +L++ G G GKT+ V
Sbjct: 4 QIWFEKYRPRKYTDLVFKEDVHHDVLRWLRDYPAHGR------ILLLKGPPGTGKTSLVH 57
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
++S G L E+ N +Y K+ YG +I G
Sbjct: 58 VLSSVFGLNLVEF-------------NASDDPKYIEKISG---------AYG----TIDG 91
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I ID +P+ + ER LV S + VV+T S
Sbjct: 92 KKNLIFIDEIDSIPLAD----LER-------LVSSIKLVYPVVMT---------SNEIHL 131
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E++ ++ + ++ ++ I G + +IC++E + + +A+ SGGD R I
Sbjct: 132 EDVYTVEI----KRPGISEIRKG-----IERICKEEGVYVGNSALLQMAEDSGGDFRAII 182
Query: 377 TSLQ 380
LQ
Sbjct: 183 NHLQ 186
>gi|150403244|ref|YP_001330538.1| replication factor C large subunit [Methanococcus maripaludis C7]
gi|166977385|sp|A6VIW1.1|RFCL_METM7 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|150034274|gb|ABR66387.1| AAA ATPase central domain protein [Methanococcus maripaludis C7]
Length = 482
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 46/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL ++A K E + W E + K K +++ G G GKT I
Sbjct: 4 WVEKYRPKSLNDVAGHNKTKESLIEWIESFINGQKQK----PILLAGPPGSGKTTLAYAI 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A Y +D +E + ++ + ++ +TS S+ G
Sbjct: 60 AKD-----YAFDV----------------IELNASDKRNKDVISQVVGTAATSKSLTG-- 96
Query: 259 KSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K + I+L +D L + R + + L ++ P V+LT A+ V A
Sbjct: 97 KRTLIVLDEVDGLSGNDDRGGVAEIIKVL----KTAENP--VILT----ANDVYKPALMT 146
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L++ G+ + SI L KI +E + + + I +A +GGD+R AI
Sbjct: 147 LRNSVNLINVGS-------VHTNSIPPVLRKIALKEGFEIDEKVIKTIASHAGGDLRAAI 199
Query: 377 TSLQ 380
LQ
Sbjct: 200 NDLQ 203
>gi|45357885|ref|NP_987442.1| replication factor C large subunit [Methanococcus maripaludis S2]
gi|50400880|sp|Q6M0E9.1|RFCL_METMP RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|45047445|emb|CAF29878.1| replication factor C, large subunit [Methanococcus maripaludis S2]
Length = 486
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL ++A K + + W E +G K +++ G G GKT I
Sbjct: 4 WVEKYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQK----PILLAGPPGSGKTTLAYAI 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ Y +D +E + ++ + ++ +TS S+ G
Sbjct: 60 AND-----YAFDV----------------IELNASDKRNKDVISQVVGTAATSKSLTGRR 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ +D L + R + + L ++ P V+LT A+ V A
Sbjct: 99 TLIVLDEVDGLSGNDDRGGVAEIIKVL----KTAENP--VILT----ANDVYKPALMTLR 148
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ G+ + SI L +I +E + + + I ++A SGGD+R AI
Sbjct: 149 NSVNLINVGS-------VHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAIND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|66808577|ref|XP_638011.1| replication factor C subunit [Dictyostelium discoideum AX4]
gi|74853625|sp|Q54MH9.1|RFC1_DICDI RecName: Full=Probable replication factor C subunit 1; AltName:
Full=Activator 1 subunit 1
gi|60466460|gb|EAL64515.1| replication factor C subunit [Dictyostelium discoideum AX4]
Length = 1401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 29/251 (11%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVR 196
LW EKY+P+ +E++ +E W ++ +D N ++++G G+GKT+
Sbjct: 850 LWVEKYRPKVIEDIVGNPGIFQEFGKWLDQWNSTAPRDASKKNAVLLSGPPGIGKTSAAL 909
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS----P 252
I G E + E + +G+ + +F +G+T+
Sbjct: 910 LICKQKGFEAIELNASDARSKSE-IKRLLSGVSDNQNITKF---------FGTTNQDTGK 959
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
+ K +++D++ ++G + + + ++ L++ + +P + C D
Sbjct: 960 DVQANKKIKTAIILDEIDGSSGNSDRGGIAE-IIGLIKKSKMP---FICLCN-----DYY 1010
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
+ L++ +D RK LN +++ R L+ I + E +S+ I+ V +S DI
Sbjct: 1011 SSKVTSLRNHCMDLKLRKPTLNQVSS----RLLA-IAKHEGMKVSSYMIEKVYTSSHSDI 1065
Query: 373 RQAITSLQFSS 383
RQ+I +LQ S
Sbjct: 1066 RQSINTLQMMS 1076
>gi|448311841|ref|ZP_21501594.1| replication factor C large subunit [Natronolimnobius
innermongolicus JCM 12255]
gi|445603462|gb|ELY57424.1| replication factor C large subunit [Natronolimnobius
innermongolicus JCM 12255]
Length = 507
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 97/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E Y+P +L E+ K + + W + D +D +++ G GVGKT+ +
Sbjct: 4 WTETYRPTTLSEVRGNNKARDNLEQWAKT-WDDHRD-----AVIVHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS +G W P +E + + +ER+ + S ++ G
Sbjct: 58 ASDMG-----W----PV------------MELNASDSRGADVIERVAGEAAKSGTLTGGE 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G + + + +V+ + P +V E F +
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSAE-VTRVVKDANQPIVLVANE-------------FYD 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ L +A + ++ SI L ICR+E + ++ +A + GD+R A+
Sbjct: 143 MSQSLRNA-CETIEFRDVSKRSIVPVLRDICRREGIEFEEDALEKIAADTSGDLRSAVND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|410898978|ref|XP_003962974.1| PREDICTED: replication factor C subunit 2-like [Takifugu rubripes]
Length = 350
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 51/263 (19%)
Query: 123 NPDHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVL 181
N D D SA + T +L W EKY+P L E+ + V + + E G+ + +
Sbjct: 17 NTDADEPSAKNPTYELPWVEKYRPLKLNEVVGNEETVSRLEVFARE--GNVPN------I 68
Query: 182 VITGQAGVGKTATVRQIA-SHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
+I G G GKT ++ +A + LGA + LE + D +
Sbjct: 69 IIAGPPGTGKTTSILCLARALLGASTKD-----------------AVLELNASNDRGIDV 111
Query: 241 VE-RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVV 299
V +I+ + ++P + I+L + +T+G A + LR+ + + ++T A
Sbjct: 112 VRNKIKMFAQQKVTLP-RGRHKIIILDEADSMTDG--AQQALRRIMEIYSKTTRFALA-- 166
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLS 357
C +D + E +QS R L + +T+G I L ++ +E S+S
Sbjct: 167 ---CNASDKI------IEPIQS-------RCAVLRYSKLTDGQILARLQEVVEKEALSVS 210
Query: 358 TEQIDLVAQASGGDIRQAITSLQ 380
+ ++ V + GD+RQA+ +LQ
Sbjct: 211 DDGLEAVIFTAQGDMRQALNNLQ 233
>gi|83769742|dbj|BAE59877.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1054
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 47/265 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P S+ + + VE++++W + ++K FS ++I G
Sbjct: 466 ELWTTKYAPTSMNMICGNKTAVEKLQSWLRDWHKNAKGNFSKPGKDGTGIYRAVMIHGPP 525
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+HL A+L +D + T ++ + G L+ TS F +
Sbjct: 526 GIGKT-----TAAHLVAKLEGYDIVETNASDTRSKKLVETGLLGVLDTTSLQGYFAADGQ 580
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ R K + +L++D++ +G +A +R L + + THIP ++
Sbjct: 581 KVHR-----------EKKNMVLIMDEV---DGMSAGDRGGVGALAAIAKKTHIPLILICN 626
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D ++ T I+ LS IC +E + +
Sbjct: 627 E-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLKIPPPVL 673
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQ 386
D + + + DIRQ I L L Q
Sbjct: 674 DSLIEGTHADIRQIINMLSTVKLDQ 698
>gi|115485959|ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|108864532|gb|ABA94349.2| BRCA1 C Terminus domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|215697840|dbj|BAG92033.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1021
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 83 SSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEK 142
+S +QQ K+ P +E + G+ ++P +G + D+ + W EK
Sbjct: 352 NSEKQQKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSLQWTEK 411
Query: 143 YKPRSLEELAVQRKKVEE----VRAWFEERL-----GDSK---DKFSTNVLVITGQAGVG 190
Y+P+ ++ + V++ +R+W ++ L G K D + ++++G G+G
Sbjct: 412 YRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLLSGPPGIG 471
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
KT T + ++ LG + E + + G ++ + E Y +
Sbjct: 472 KTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKEL--ISNATLNYSNN 529
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTECGKADSV 309
P A+L++D++ +G +A +R L+ ++ + IP ++ C
Sbjct: 530 RLKRP-----KAVLVMDEV---DGMSAGDRGGVADLIASIKMSKIP---IICICN----- 573
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
D +Q + L + + RK T + + L +I ++E ++ +A+
Sbjct: 574 DRYSQKLKSLVNYCLLLNFRKP-----TKQQMGKRLMEIAKKEGLQAQENAMEELAERVH 628
Query: 370 GDIRQAITSLQFSSLKQ 386
GDIR A+ LQ+ SL Q
Sbjct: 629 GDIRMALNHLQYMSLSQ 645
>gi|448499266|ref|ZP_21611280.1| replication factor C large subunit [Halorubrum coriense DSM 10284]
gi|445697603|gb|ELZ49665.1| replication factor C large subunit [Halorubrum coriense DSM 10284]
Length = 500
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 146/377 (38%), Gaps = 81/377 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVVLDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A + ++ L +A +++ ++ SI L +CR+E ++ + +A+
Sbjct: 147 -----ANDYYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDVCRKEGIEFESDALQRIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R A+ LQ ++ +D S++++ + RD+ L LF
Sbjct: 201 NRGDLRGAVNDLQAATQGRD-----SITVAD--------------VVTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH-GQARPVLDFL-HE 485
L L + + L Q A+ V + L ++ VL +A DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLTAWIE--NNVLDVYEPAEAVRAYDFLANA 295
Query: 486 NCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 296 DVWLGRVRATQNYSYWR 312
>gi|374628354|ref|ZP_09700739.1| replication factor C small subunit [Methanoplanus limicola DSM
2279]
gi|373906467|gb|EHQ34571.1| replication factor C small subunit [Methanoplanus limicola DSM
2279]
Length = 325
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 57/275 (20%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+ +W EKY+P+ L+++ Q++ V ++++ + + S L+ TG AG+GKT +
Sbjct: 4 SNTIWIEKYRPKRLDDVVGQKEIVSRLKSYVKTK--------SLPHLLFTGTAGIGKTTS 55
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A W+ ++E + + G++ +I+++ T+P
Sbjct: 56 AVALAKEFYGE--HWNVN----FREMNASDERGIDVVRN---------QIKQFARTAPIG 100
Query: 255 PGESK----SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
E K A L +D RT R C +L S + + ++ D +
Sbjct: 101 GAEFKILFLDEADALTNDAQAALRRTMENYARTCRFIL--SCNYSSKII-------DPIQ 151
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
S + P+ +I L I E +LS + I + S G
Sbjct: 152 SRCAIYR---------------FRPLDREAITEELMHIAENEGLTLSEDAISAIIYVSAG 196
Query: 371 DIRQAITSLQFSS-----LKQDPMLNLSLSISKPN 400
D+R+AI +LQ ++ +K++ + ++ S +KP+
Sbjct: 197 DMRKAINALQGAAIIDPEIKEEMIFEIT-STAKPD 230
>gi|358056932|dbj|GAA97282.1| hypothetical protein E5Q_03960 [Mixia osmundae IAM 14324]
Length = 932
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 106/266 (39%), Gaps = 41/266 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS---------TNVLVITGQA 187
QLW KY P+ ++++ + VE+++ W E + K F + ++I+G
Sbjct: 352 QLWTVKYAPKQIKDICGNKGNVEKLKTWLETFDTNRKSGFKKPGKDGMGVSRAVMISGPP 411
Query: 188 GVGKTATVRQIASHLGARLYEW---DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G+GKT +A+ G + E DT + + Q + T + LD +
Sbjct: 412 GIGKTTAAHVVANACGYNVVELNASDTRSKKLLQTAFKSTIT----NTSLDGY------- 460
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTEC 303
+G ++ G++ + L+ L +G + +R L ++ T IP +
Sbjct: 461 --FGEGRLNLNGDAITDKTCLV--LDEVDGMSGGDRGGVGALNDFIKKTKIPIICIAN-- 514
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
D+ +Q Q A + T ++ + IC +E+ +S E ++
Sbjct: 515 ------DAKSQKMRPFQ-----ATCHSLPFRRPTAVELRSRMMSICYKEKLKVSAEVVEQ 563
Query: 364 VAQASGGDIRQAITSLQFSSLKQDPM 389
+A + DIRQ I L L + M
Sbjct: 564 LASGAQSDIRQIINMLSTFKLSAEQM 589
>gi|330834115|ref|YP_004408843.1| replication factor C small subunit [Metallosphaera cuprina Ar-4]
gi|329566254|gb|AEB94359.1| replication factor C small subunit [Metallosphaera cuprina Ar-4]
Length = 325
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 50/267 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+PR+L+++ Q+ V+ ++ + +ER + L+ G G GKT +
Sbjct: 5 LWAEKYRPRTLDDIVNQKDIVDRLKRFVKER--------NMPHLLFAGPPGTGKTTSALA 56
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVERIRRYGSTSPSIPG 256
+ L Y+ + E + + G+ +K+ +F V PG
Sbjct: 57 LVHDLYGENYDQ------FFLELNASDENGINVIRTKVKDFARTV------------TPG 98
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+LL + +T+ A + LR+ + L ST A C + QS
Sbjct: 99 NVPFKTVLLDEADNMTSD--AQQALRRTMELYTESTRFILA-----CNYLSKIIDPIQSR 151
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L P+ + L I ++E+ + +++V +GGD+R+AI
Sbjct: 152 TAL-----------FRFYPLKKEDVILRLENILKEEKVQYDVKSLEVVYDVTGGDMRKAI 200
Query: 377 TSLQ----FSSLKQDPMLNLSLSISKP 399
LQ + + D +L + L +++P
Sbjct: 201 NVLQAAAAYGKVTTDSVLKV-LGLAQP 226
>gi|303388197|ref|XP_003072333.1| replication factor C large subunit [Encephalitozoon intestinalis
ATCC 50506]
gi|303301472|gb|ADM10973.1| replication factor C large subunit [Encephalitozoon intestinalis
ATCC 50506]
Length = 383
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
QLWAE+Y+PR EL + + W ++ K +L++ G +G GKT+
Sbjct: 4 QLWAERYRPRKYTELVFKGDVHHDALKWLKDYPEHGK------ILLLRGPSGTGKTSLAY 57
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCK---TGLEYTSKLDEFEN--FVERIRRYGSTS 251
++S LG L E++ W + M N G + +DE + F+ + S
Sbjct: 58 VLSSALGFDLVEFNADNDPDWMDRMLNSNRIINGRKNIILVDEIDGNPFLNVDKLISSPK 117
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQ 283
P S+ + L D V R FE +R+
Sbjct: 118 LVCPLVMTSNEMCLKDVYTVEIQRPGFEEVRR 149
>gi|218185964|gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indica Group]
Length = 1014
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 83 SSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEK 142
+S +QQ K+ P +E + G+ ++P +G + D+ + W EK
Sbjct: 345 NSEKQQKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSLQWTEK 404
Query: 143 YKPRSLEELAVQRKKVEE----VRAWFEERL-----GDSK---DKFSTNVLVITGQAGVG 190
Y+P+ ++ + V++ +R+W ++ L G K D + ++++G G+G
Sbjct: 405 YRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLLSGPPGIG 464
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
KT T + ++ LG + E + + G ++ + E Y +
Sbjct: 465 KTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKEL--ISNATLNYSNN 522
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTECGKADSV 309
P A+L++D++ +G +A +R L+ ++ + IP ++ C
Sbjct: 523 RLKRP-----KAVLVMDEV---DGMSAGDRGGVADLIASIKMSKIP---IICICN----- 566
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
D +Q + L + + RK T + + L +I ++E ++ +A+
Sbjct: 567 DRYSQKLKSLVNYCLLLNFRKP-----TKQQMGKRLMEIAKKEGLQAQENAMEELAERVH 621
Query: 370 GDIRQAITSLQFSSLKQ 386
GDIR A+ LQ+ SL Q
Sbjct: 622 GDIRMALNHLQYMSLSQ 638
>gi|302510945|ref|XP_003017424.1| hypothetical protein ARB_04305 [Arthroderma benhamiae CBS 112371]
gi|302657578|ref|XP_003020508.1| hypothetical protein TRV_05402 [Trichophyton verrucosum HKI 0517]
gi|291180995|gb|EFE36779.1| hypothetical protein ARB_04305 [Arthroderma benhamiae CBS 112371]
gi|291184348|gb|EFE39890.1| hypothetical protein TRV_05402 [Trichophyton verrucosum HKI 0517]
Length = 362
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
D + A + + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 DVSGAPVNYELPWVEKYRPIFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT ++ +A L DT + + + + L Y L + RI+
Sbjct: 70 PGIGKTTSILCLARQLLG-----DTYKEAVLELNASDERGLLNYALNLFRIDVVRNRIKG 124
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
+ ++P + ++L + +T+G A + LR+ + + +T A C ++
Sbjct: 125 FAQKKVTLP-PGRHKLVILDEADSMTSG--AQQALRRTMEIFSTTTRFAFA-----CNQS 176
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ + E LQS + + +T+ + + L +IC E+ S + I +
Sbjct: 177 NKI------IEPLQS-----RCAILRYSRLTDAQVVKRLMQICEAEKVKYSDDGIAALVF 225
Query: 367 ASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 226 SAEGDMRQAINNLQ 239
>gi|19173693|ref|NP_597496.1| DNA REPLICATION FACTOR C SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|19170899|emb|CAD26673.1| DNA REPLICATION FACTOR C SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 568
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 115/278 (41%), Gaps = 43/278 (15%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
S++ +W+EKY+P +E+ + V+++ + + R ++++GQ G+GKT
Sbjct: 107 SASSGVWSEKYRPSKRDEIVGNQGIVKQLEDYLQGRT-------KYKAVLLSGQPGIGKT 159
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
T + LG + E++ + ++ LE ++K+ F S S
Sbjct: 160 TTAHVVCKSLGLNVIEFNA----------SDVRSKLEISNKVKAF---------VSSQSI 200
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
PG SKS +++ + +++ R L+ +V+ T +P + D
Sbjct: 201 LRPGSSKSKVLIMDEVDGMSSDRGGIPE----LISIVKETVVPIICICN--------DRN 248
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
L S +D RK P + R + +I E + ++ + GDI
Sbjct: 249 NPKIRTLSSYCLDLRFRK----PDARQILSR-VKQILDMEGKKIPDGLLNEIISRGAGDI 303
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG 410
R I+ +Q +L++ L ++ ++ + N + D G
Sbjct: 304 RYTISMVQSIALRKALNLKVAENLVRKNVVKNVFDVAG 341
>gi|308807567|ref|XP_003081094.1| replication factor C 37 kDa subunit (ISS) [Ostreococcus tauri]
gi|116059556|emb|CAL55263.1| replication factor C 37 kDa subunit (ISS) [Ostreococcus tauri]
Length = 342
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 44/263 (16%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
+H + A S+ Q W EKY+P+++ ++A Q E+V E+ L + + +
Sbjct: 4 EHGARDARSTAHQPWVEKYRPKTVRDVASQ----EQVVRVLEQAL----ETGNMPHCLFY 55
Query: 185 GQAGVGKTATVRQIASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVE 242
G G GKT IA L G LY+ +E + + G+ K+ F +
Sbjct: 56 GPPGTGKTTCALAIAKQLYGPELYKQRV------KELNASDERGISVVRDKVKTFASLA- 108
Query: 243 RIRRYGSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
G+ +P P S IL++D D T+ ++A R+ + + R + V
Sbjct: 109 ----VGAPAPGYP--SPPYKILILDEADAMTTDAQSAMRRMMETYSKVTRFFLLCNYVTK 162
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
D + S F P+ ++ L I QE LS +
Sbjct: 163 I----IDPITSRCAKFR---------------FQPLALETMTTRLKYIAEQESLELSDDV 203
Query: 361 IDLVAQASGGDIRQAITSLQFSS 383
++ SGGD+R+AIT LQ ++
Sbjct: 204 FPACSKHSGGDMRKAITLLQSAA 226
>gi|317147094|ref|XP_001821879.2| replication factor C subunit 1 [Aspergillus oryzae RIB40]
Length = 1056
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 47/265 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P S+ + + VE++++W + ++K FS ++I G
Sbjct: 468 ELWTTKYAPTSMNMICGNKTAVEKLQSWLRDWHKNAKGNFSKPGKDGTGIYRAVMIHGPP 527
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+HL A+L +D + T ++ + G L+ TS F +
Sbjct: 528 GIGKT-----TAAHLVAKLEGYDIVETNASDTRSKKLVETGLLGVLDTTSLQGYFAADGQ 582
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ R K + +L++D++ +G +A +R L + + THIP ++
Sbjct: 583 KVHR-----------EKKNMVLIMDEV---DGMSAGDRGGVGALAAIAKKTHIPLILICN 628
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D ++ T I+ LS IC +E + +
Sbjct: 629 E-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLKIPPPVL 675
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQ 386
D + + + DIRQ I L L Q
Sbjct: 676 DSLIEGTHADIRQIINMLSTVKLDQ 700
>gi|242209061|ref|XP_002470379.1| predicted protein [Postia placenta Mad-698-R]
gi|220730549|gb|EED84404.1| predicted protein [Postia placenta Mad-698-R]
Length = 697
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STNV---LVITGQA 187
QLW +Y P++L+E+ + +VE+++ W ++ + K F NV ++ITG
Sbjct: 144 QLWTNRYAPQTLKEICGNKGQVEKLQRWLDDWPSNLKANFKKPGKDGMNVFRAVLITGPP 203
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE---YTSKLDEFENFVERI 244
G+GKT + +HL A+L + TP K +E +T DE
Sbjct: 204 GIGKTTS-----AHLCAKLQGF---TPIELNASDARSKKLVEVGSFTCSSDE-------- 247
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTEC 303
TS ++ L++D++ +G +A +R L L+R T IP + +
Sbjct: 248 ----RTSNAVGVTITDKTCLIMDEV---DGMSAGDRGGVGALAALIRKTKIPIICIANDR 300
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
G A + L + + R+ I + R LS I +E+ + ID
Sbjct: 301 G--------APKMKPLSNAAYNLTFRRPEATTIRS----RILS-IAFKEKMKIPANVIDQ 347
Query: 364 VAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLS 423
+ + + DIRQ + L L D M NF E KA + ++G +
Sbjct: 348 LIEGAQSDIRQVLNMLSTWKLSNDTM----------NFDEGKALAKA--NEKYGIMTPFN 395
Query: 424 LFH-ALGKFLHN--KRETDN----LVKMDQD---AFVVKDKFSRLPLK---MDAPEKVLS 470
+ LG ++ + RET N L D F+ ++ P K +D PEK+L
Sbjct: 396 IIQKMLGPYMFSPTARETLNDKMELYFHDHSFVPLFIQENYLKTQPAKIRNIDGPEKILK 455
Query: 471 Q 471
Q
Sbjct: 456 Q 456
>gi|409049495|gb|EKM58972.1| hypothetical protein PHACADRAFT_157248 [Phanerochaete carnosa
HHB-10118-sp]
Length = 677
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 46/258 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF---------STNVLVITGQA 187
QLW ++Y P +L+E+ + ++E+++ W + K F ++ ++ITG
Sbjct: 154 QLWVDRYSPHTLKEVCGNKGQIEKLQQWLNDWPSSLKSGFKKPGKNAMNTSRAVLITGPP 213
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK-----LDEFENFVE 242
G+GKT A+HL A+L + TP K +E ++ LD + + E
Sbjct: 214 GIGKTT-----AAHLCAKLAGF---TPIELNASDARSKRLVENSTNVSNTSLDGWMHGTE 265
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
G + + L++D++ +G +A +R L+ L+R T IP +
Sbjct: 266 ATNAAGV-------KITDKSCLIMDEV---DGMSAGDRGGVVALVALIRKTKIPIICIAN 315
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
+ G AQ + L A A + +I+ L I +E+ + I
Sbjct: 316 DRG--------AQKLKPLI-----ANAFNLPFRRPEAAAIRSRLLTIAFKEKMKVPANVI 362
Query: 362 DLVAQASGGDIRQAITSL 379
D + + DIRQ + L
Sbjct: 363 DQLVMGAQSDIRQVLNML 380
>gi|337285092|ref|YP_004624566.1| replication factor C large subunit [Pyrococcus yayanosii CH1]
gi|334901026|gb|AEH25294.1| replication factor C large subunit [Pyrococcus yayanosii CH1]
Length = 482
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 48/243 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EKY+PR L E+ Q + +E VRAW E L G K K L++ G G GKT TV
Sbjct: 4 WVEKYRPRRLSEIINQEQALERVRAWIEAWLHGRPKKK----ALLLAGPPGSGKTTTVYA 59
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A + E + E E+I RY + ++
Sbjct: 60 LAHEYRFEVIELNASD------------------------ERTYEKIERYVQAAYTMDIL 95
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K ++ +D+ A E + L+ P ++ K V +
Sbjct: 96 GKRRKLIFLDEADNIEPSGAKE-----IAKLIDKAKNP---IIMAANKYWEVPREIREKA 147
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
EL V +T I + L +I + E+ + + + +A+ + GD+R AI
Sbjct: 148 EL-----------VEYKRLTQRDIVKALLRILKAERLEIPKDLLYEIAKRASGDLRAAIN 196
Query: 378 SLQ 380
LQ
Sbjct: 197 DLQ 199
>gi|308480266|ref|XP_003102340.1| CRE-RFC-1 protein [Caenorhabditis remanei]
gi|308262006|gb|EFP05959.1| CRE-RFC-1 protein [Caenorhabditis remanei]
Length = 835
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 108/271 (39%), Gaps = 47/271 (17%)
Query: 139 WAEKYKPRSLEELAVQR-------KKVEEVRAWFEERLGDS--------------KDKFS 177
W +KYKP+ +++L Q K ++ ++ W LG+ D
Sbjct: 273 WVDKYKPKRMDQLVGQNGEKSPMNKLMDWLKNWARHNLGEGAKIKKPKPPPFMAQSDGTP 332
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
+++G GVGKT LG +L E + + + +K+ E
Sbjct: 333 FKAALLSGTPGVGKTTCAYMACQQLGYQLVEMNA----------SDVRNKKHLEAKIGEL 382
Query: 238 ENFVERIRRYGSTSPSIPGES-KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
+I ++ +P ++ K +L++D++ +G + + L+ +++ + IP
Sbjct: 383 SG-SHQIEQFFGVKKCVPQDNLKVHHVLIMDEVDGMSGNEDRAGISE-LIQIIKDSKIP- 439
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ C D L + D K + SI+ + IC QE+ +
Sbjct: 440 --IICICN-----DRQHPKIRSLANHCFDLRFSKPRVE-----SIRSRMMTICSQEKLKI 487
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQD 387
E++D + + SG D+RQ I +LQ S D
Sbjct: 488 KVEELDELIELSGHDVRQTIYNLQMRSKSAD 518
>gi|146322944|ref|XP_755554.2| DNA replication factor C subunit Rfc1 [Aspergillus fumigatus Af293]
gi|129558538|gb|EAL93516.2| DNA replication factor C subunit Rfc1, putative [Aspergillus
fumigatus Af293]
gi|159129617|gb|EDP54731.1| DNA replication factor C subunit Rfc1, putative [Aspergillus
fumigatus A1163]
Length = 1085
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 44/287 (15%)
Query: 117 RFEGLVNPDHDSAS-ASSSTQ------QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL 169
+ +G + P + S A S+TQ QLW KY P ++ + + VE+++ W
Sbjct: 451 KAKGSMTPKASAGSQAPSATQGAKVDDQLWTTKYAPTAINMICGNKGAVEKLQTWLHNWH 510
Query: 170 GDSKDKFST---------NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEY 220
++K FS ++I G G+GKT +A G + E + +
Sbjct: 511 KNAKFNFSRPGKDGSGVYRAVMIHGPPGIGKTTAAHLVAKLEGYDVVETNASDTRSKKLV 570
Query: 221 MHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER 280
N L+ TS F ++I +K + +L++D++ +G +A +R
Sbjct: 571 ESNLLDILDTTSLQGYFSGEGKKIE-----------STKKNLVLIMDEV---DGMSAGDR 616
Query: 281 LR-QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNG 339
L+ L + THIP ++ E + +++ D ++ T
Sbjct: 617 GGVGALVSLAKKTHIPLILICNE-----------RRLPKMKPF--DHVTYELPFRRPTAE 663
Query: 340 SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
I+ LS IC +E + +D + + + DIRQ I L L Q
Sbjct: 664 QIRARLSTICFREGLKIPPPVLDSLIEGTNADIRQVINMLSTVKLDQ 710
>gi|410720679|ref|ZP_11360032.1| DNA polymerase III, gamma/tau subunit [Methanobacterium sp.
Maddingley MBC34]
gi|410600390|gb|EKQ54918.1| DNA polymerase III, gamma/tau subunit [Methanobacterium sp.
Maddingley MBC34]
Length = 500
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 101/262 (38%), Gaps = 47/262 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVR 196
LW EKY P++++++ +K +EE+ W E GD + L++ G G GKT
Sbjct: 2 LWTEKYSPQTMKDVLGNKKAIEEIENWVESWDHGDPQ-----KCLLLVGPPGTGKTTLAH 56
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A + E + + M+ S S S+ G
Sbjct: 57 LVAGEFSDHI-ELNASDKRSYDIIMNTVGE---------------------ASASVSLFG 94
Query: 257 ESKSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
+ I+L +D L R + + +++ H P ++ D ++
Sbjct: 95 QGGRKLIILDEVDGLHGNEDRGGIRAINK----IIKEGHHPMIMMAN--------DLYSK 142
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ L+S + + +N + SI L +IC +E + +A+ S GD+R
Sbjct: 143 RIQSLKS-----KCQLIKINKVHTNSIVALLKRICAKEGVDFEEHVLRTLAKRSRGDLRS 197
Query: 375 AITSLQFSSLKQDPMLNLSLSI 396
AI LQ + +D + + L +
Sbjct: 198 AINDLQVIAQGKDSVTSEDLEV 219
>gi|124485340|ref|YP_001029956.1| replication factor C small subunit [Methanocorpusculum labreanum Z]
gi|158512813|sp|A2SQT3.1|RFCS_METLZ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|124362881|gb|ABN06689.1| replication factor C small subunit [Methanocorpusculum labreanum Z]
Length = 321
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 44/272 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+P++L E+ Q+ VE +R++ + + L+ TG AGVGKT
Sbjct: 6 EIWIEKYRPKNLAEVVGQQDVVERLRSYVATK--------ALPHLLFTGSAGVGKTTCAV 57
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A + + + ++E + + G++ +I+++ T+P
Sbjct: 58 ALAREMFGDTWNMN------FRELNASDERGIDVVRN---------QIKQFARTAPLGDA 102
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K IL +D+ A + Q L + T + C + + QS
Sbjct: 103 TFK---ILFLDEAD------ALTQDAQAALRRTMENYAETCRFILSCNYSSKIIDPIQSR 153
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+ P+T+ +I +++I ++E ++ + S GD+R+AI
Sbjct: 154 CAIYR-----------FRPLTDEAISEEIARIAKKEGITIDEGAYVAITYVSLGDMRKAI 202
Query: 377 TSLQFSSLKQDPMLNLSL-SISKPNFPEEKAD 407
+LQ +++ D + ++ +I+ P+E D
Sbjct: 203 NALQGAAIVSDHVTAENIYAITSNAKPQEITD 234
>gi|449329092|gb|AGE95366.1| DNA replication factor c subunit [Encephalitozoon cuniculi]
Length = 568
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 114/278 (41%), Gaps = 43/278 (15%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
S++ +W+EKY+P +E+ + V+++ + + R ++++GQ G+GKT
Sbjct: 107 SASSGVWSEKYRPSKRDEIVGNQGIVKQLEDYLQGRT-------KYKAVLLSGQPGIGKT 159
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
T + LG + E++ + ++ LE ++K+ F S S
Sbjct: 160 TTAHVVCKSLGLNVIEFNA----------SDVRSKLEISNKVKAF---------VSSQSI 200
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
PG SKS +++ + +++ R L+ +V+ T +P + D
Sbjct: 201 LRPGSSKSKVLIMDEVDGMSSDRGGIPE----LISIVKETVVPIICICN--------DRN 248
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
L S +D RK I + + +I E + ++ + GDI
Sbjct: 249 NPKIRTLSSYCLDLRFRKPDARQIFS-----RVKQILDMEGKKIPDGLLNEIISRGAGDI 303
Query: 373 RQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG 410
R I+ +Q +L++ L ++ ++ + N + D G
Sbjct: 304 RYTISMVQSIALRKALNLKVAENLVRKNVVKNVFDVAG 341
>gi|408392832|gb|EKJ72146.1| hypothetical protein FPSE_07684 [Fusarium pseudograminearum CS3096]
Length = 1050
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 111/273 (40%), Gaps = 38/273 (13%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF---------STNVLVITGQA 187
QL KY P L + + +VE++++W + K F ++++G
Sbjct: 463 QLLTSKYAPTQLSHICGNKAQVEKIQSWLRNWPKNKKYNFQRRGADGMGGERAIIVSGPP 522
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT A+HL A L +D + + + ++ + + + N + +
Sbjct: 523 GIGKT-----TAAHLAATLEGYD-----VLESNASDSRSKKLVENGVSDVMNNTSLLGYF 572
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGKA 306
++ +K +L++D++ +G +A +R L + T IP ++ E
Sbjct: 573 AGDGKNV-DATKKKIVLIMDEV---DGMSAGDRGGVGALAKFCKKTEIPLILICNE---- 624
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ +++ D A + N T ++ + IC +E L +D + +
Sbjct: 625 -------RKLPKMKPF--DHAAFDIRFNRPTVDQVRSRIMTICHREGLKLPPTVVDALIE 675
Query: 367 ASGGDIRQAITSLQFSSLKQDPM-LNLSLSISK 398
S DIRQ I + + L Q M + S ++SK
Sbjct: 676 GSNKDIRQIINMISTAKLDQTSMDFDQSKAMSK 708
>gi|391868818|gb|EIT78027.1| replication factor C, subunit RFC1 [Aspergillus oryzae 3.042]
Length = 1078
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 47/265 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P S+ + + VE++++W + ++K FS ++I G
Sbjct: 486 ELWTTKYAPTSMNMICGNKTAVEKLQSWLRDWHKNAKGNFSKPGKDGTGIYRAVMIHGPP 545
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+HL A+L +D + T ++ + G L+ TS F +
Sbjct: 546 GIGKT-----TAAHLVAKLEGYDIVETNASDTRSKKLVETGLLGVLDTTSLQGYFAADGQ 600
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ R K + +L++D++ +G +A +R L + + THIP ++
Sbjct: 601 KVHR-----------EKKNMVLIMDEV---DGMSAGDRGGVGALAAIAKKTHIPLILICN 646
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D ++ T I+ LS IC +E + +
Sbjct: 647 E-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLKIPPPVL 693
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQ 386
D + + + DIRQ I L L Q
Sbjct: 694 DSLIEGTHADIRQIINMLSTVKLDQ 718
>gi|154151216|ref|YP_001404834.1| replication factor C small subunit [Methanoregula boonei 6A8]
gi|166225154|sp|A7I8Y0.1|RFCS_METB6 RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|153999768|gb|ABS56191.1| Replication factor C [Methanoregula boonei 6A8]
Length = 322
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 110/273 (40%), Gaps = 55/273 (20%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKT 192
+ +W EKY+P L ++ Q VE + ++ + S N+ L+ TG AGVGKT
Sbjct: 4 SHTIWIEKYRPAKLADIVGQDDIVERLSSYVK----------SGNLPHLLFTGSAGVGKT 53
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
+ AR + D+ WQ E +D N +I+ + T P
Sbjct: 54 TAAVTL-----AREFFGDS-----WQMNFRELNASDE--RGIDVVRN---QIKEFARTRP 98
Query: 253 SIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
+ K IL +D D T+ + A R + ++ T + C + +
Sbjct: 99 AGDAAFK---ILFLDEADALTTDAQAALRRTME--------SYAKTCRFILSCNYSSKII 147
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
QS + P+ ++K +++I +E ++ E +D + + G
Sbjct: 148 DPIQSRCAIYR-----------FRPLGPQAVKEEITRIAAREHLDVTPEAMDAMVYIAQG 196
Query: 371 DIRQAITSLQ----FSSLKQDPMLNLSLSISKP 399
D+R+AI +LQ S+ + PM+ S ++P
Sbjct: 197 DMRKAINALQGAAILSATIEAPMVYAITSNARP 229
>gi|389860407|ref|YP_006362646.1| replication factor C small subunit [Thermogladius cellulolyticus
1633]
gi|388525310|gb|AFK50508.1| replication factor C small subunit [Thermogladius cellulolyticus
1633]
Length = 334
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 102/255 (40%), Gaps = 61/255 (23%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+PR+L+E+ Q++ V ++ + EE+ + L+ G G GKT
Sbjct: 15 LWAEKYRPRTLDEVVNQKEVVARLKKFVEEK--------NMPHLLFAGPPGTGKTT---- 62
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLE-----YTSKLDEFENFVERIRRYGSTSP 252
+A L LY + +++YM E SK+ EF R R
Sbjct: 63 LAHCLAHDLYGDN------YRQYMLELNASDERGIDVIRSKVKEF----ARTR------- 105
Query: 253 SIPGESKSSAILLID-DLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTECGKADS 308
+ GE ILL + D + + A RL + R I P+ ++ +
Sbjct: 106 -VAGEVPFKIILLDEADNMTADAQQALRRLMELYTATTRFILIANYPSKII-------EP 157
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+ S F P++ + L I +E +TE ++ + + S
Sbjct: 158 IQSRCAVFR---------------FTPLSREDVVERLKYIAEKENVKYNTEALETIHELS 202
Query: 369 GGDIRQAITSLQFSS 383
GD+R+AI LQ +S
Sbjct: 203 EGDMRKAINILQAAS 217
>gi|359415520|ref|ZP_09207967.1| replication factor C large subunit [Candidatus Haloredivivus sp.
G17]
gi|358034123|gb|EHK02581.1| replication factor C large subunit [Candidatus Haloredivivus sp.
G17]
Length = 394
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 55/257 (21%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+P SLE+ + +E++ W E K + +++ GQAG GKT+ V
Sbjct: 1 MWVEKYRPESLEDYRGASNQKKELKDWAE------KWEQGGQAVLLHGQAGTGKTSLVEA 54
Query: 198 IASHLGARLYEW---DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ L L E D T + +E + + S
Sbjct: 55 LANDLDFELVETNASDVRTKSALKEELKGA------------------------TRQASF 90
Query: 255 PGESKSSAILLIDDLPVT--NGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
G +K ++L+D++ + R +++ ++ + P VV+T + D+
Sbjct: 91 FGGNK---LILVDEVDGMGRSDRGGIAEMKE----IISESRFP--VVMT------ANDAY 135
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
Q L++I +++V L+ + SI L I QE + VA+ +GG +
Sbjct: 136 DQKIRPLRNI-----SKQVKLDSVHTNSINAHLKWILEQEGIGYDEGAVKRVARRAGGQM 190
Query: 373 RQAITSLQFSSLKQDPM 389
R AI L+ +L ++ +
Sbjct: 191 RSAINDLEAVALGREKL 207
>gi|307354393|ref|YP_003895444.1| AAA ATPase central domain-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307157626|gb|ADN37006.1| AAA ATPase central domain protein [Methanoplanus petrolearius DSM
11571]
Length = 477
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 46/250 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EKY+P+SL ++ V ++ W ++GD ++I G+ G+GKT+ V
Sbjct: 14 WVEKYRPKSLGDIVGNNAAVRQLAEWAANWKIGDEP-------VLIYGKPGIGKTSAVYA 66
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A+ + W+ +E + D ++ +++I +T+ S+ G
Sbjct: 67 LAADMN-----WEV----------------VELNASDDRTKSVIDKIAGSTATTMSLTGA 105
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
S+ +++ D+ +G R +L ++++ P ++ A+ + A+
Sbjct: 106 SRK--LIVFDEADNLHGNADRGGAR-AILDTIKNSCQPIVLI------ANDIYGVAK--- 153
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
EL+S+ + +V + SI L IC E + +A S GD+R AI
Sbjct: 154 ELKSVCI-----QVQFRSLQARSIVPRLKYICSSEGIKCEENALLDIADESSGDLRSAIN 208
Query: 378 SLQFSSLKQD 387
L +S D
Sbjct: 209 MLHAASAGAD 218
>gi|255513870|gb|EET90135.1| Replication factor C [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 316
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 47/253 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+SL+E+ Q++ VE ++A+ ++ G+ + ++ G AGVGKT + +
Sbjct: 3 WTEKYRPKSLDEVIGQKQIVERLKAFVKQ--GNFPN------MIFAGSAGVGKTTSAIAM 54
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L +D T ++E + G++ E +NF + I + +P
Sbjct: 55 AKDL------YDDDLNTAFKELNASDARGIDVIR--GEVKNFAKTI-----SIARVP--- 98
Query: 259 KSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
I+ +D D + + A R + T +L S + ++
Sbjct: 99 --VKIIFLDEADALTADAQHALRRTMEKF-------SAETRFIL-------SANYASKII 142
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E +QS V P+T +K +++I + E +L ++ + GD+R+
Sbjct: 143 EPIQSRCV-----VFRFKPLTEDDMKEYVNRIVKGEGITLEKNAMEALIYVGDGDLRKLT 197
Query: 377 TSLQFSSLKQDPM 389
LQ +++K + +
Sbjct: 198 NVLQSAAMKSEKI 210
>gi|125543072|gb|EAY89211.1| hypothetical protein OsI_10707 [Oryza sativa Indica Group]
Length = 181
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 462 MDAPEKVLSQAHGQARPVLDFLHENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLG 521
MD PEKVLSQAHG+ R V DFLHEN LD + + + L E CLL
Sbjct: 1 MDIPEKVLSQAHGKVRTVADFLHENV-LDFIDNDAIDDAWSVASYLSE------ADCLLA 53
Query: 522 G 522
G
Sbjct: 54 G 54
>gi|371943672|gb|AEX61500.1| putative replication factor C small subunit [Megavirus courdo7]
gi|425701258|gb|AFX92420.1| putative replication factor C small subunit [Megavirus courdo11]
Length = 344
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ + + + ++++ E + S L+ G +G GKT+T++
Sbjct: 19 WIEKYRPKDMNHIISHEEITLALKSFIETK--------SLPHLLFFGPSGSGKTSTIKCC 70
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS L +D T + E + + G+E + +NFV + +P E
Sbjct: 71 ASKL------YDKYTDCMILELNASNERGIETVRT--KIKNFVS-----SKNTIFLPMEL 117
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++ L+I D + A LRQ + ++T C D ++ QS
Sbjct: 118 RNIFKLVILDEIDSMTVEAQGMLRQTIEKNSKTTRFCLI-----CNDIDKINLALQSRCS 172
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L +P+ + + + L IC+ E + I+ + S GD+R AI +
Sbjct: 173 L-----------FRFSPLGDNDMYKRLKDICKIENVKYTKGVIEAIINISKGDMRSAINT 221
Query: 379 LQFSSLKQDPMLNLS--LSISKPNFPE 403
LQ +L + M+ ++ IS PE
Sbjct: 222 LQHVNLTVNDMITVNDVYKISGHCMPE 248
>gi|46105398|ref|XP_380503.1| hypothetical protein FG00327.1 [Gibberella zeae PH-1]
Length = 1049
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 111/273 (40%), Gaps = 38/273 (13%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF---------STNVLVITGQA 187
QL KY P L + + +VE++++W + K F ++++G
Sbjct: 462 QLLTSKYAPTQLSHICGNKAQVEKIQSWLRNWPKNKKYNFQRRGADGMGGERAIIVSGPP 521
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT A+HL A L +D + + + ++ + + + N + +
Sbjct: 522 GIGKT-----TAAHLAATLEGYD-----VLESNASDSRSKKLVENGVSDVMNNTSLLGYF 571
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGKA 306
++ +K +L++D++ +G +A +R L + T IP ++ E
Sbjct: 572 AGDGKNV-DATKKKIVLIMDEV---DGMSAGDRGGVGALAKFCKKTEIPLILICNE---- 623
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ +++ D A + N T ++ + IC +E L +D + +
Sbjct: 624 -------RKLPKMKPF--DHAAFDIRFNRPTVDQVRSRIMTICHREGLKLPPTVVDALIE 674
Query: 367 ASGGDIRQAITSLQFSSLKQDPM-LNLSLSISK 398
S DIRQ I + + L Q M + S ++SK
Sbjct: 675 GSNKDIRQIINMISTAKLDQTSMDFDQSKAMSK 707
>gi|328790808|ref|XP_397246.4| PREDICTED: replication factor C subunit 1 [Apis mellifera]
Length = 1009
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 47/264 (17%)
Query: 134 STQQLWAEKYKPRSLEEL-------AVQRKKVEEVRAWFEERLGDSK-----------DK 175
STQ L EKY+P++++++ ++ +K + W + + G K D
Sbjct: 449 STQAL-VEKYRPKTMKQILGQQGDKSIAKKLYAWLINWHKNQSGQVKHIKPNPWTKNSDG 507
Query: 176 FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLD 235
+++G G+GKT TV+ I + LG L E++ + L T+
Sbjct: 508 AFFKAALLSGPPGIGKTTTVQVICNELGFDLIEFNASDTRSKKLLEEEVSELLSNTT--- 564
Query: 236 EFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIP 295
++ Y + S P S +LL+D++ G L++ L+ L++ST IP
Sbjct: 565 --------LKNYFQDNKSKPS---SKHVLLMDEVDGMAGNEDRGGLQE-LIKLIKSTDIP 612
Query: 296 TAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
+ C D L + D K L I+ + IC +E +
Sbjct: 613 IVCI---CN-----DRNHSKMRTLANYTFDLRFSKPRLE-----QIRAAMKSICFKENIN 659
Query: 356 LSTEQIDLVAQASGGDIRQAITSL 379
++ E +DL+ +++ DIRQ I L
Sbjct: 660 ITNEDLDLLIESTNQDIRQIINHL 683
>gi|336468521|gb|EGO56684.1| hypothetical protein NEUTE1DRAFT_65451 [Neurospora tetrasperma FGSC
2508]
Length = 928
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 108/277 (38%), Gaps = 57/277 (20%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVL 181
+ + QLW KY P ++ ++ + VE+++ W F++R D + +
Sbjct: 320 TPSSQLWTTKYAPTAMNQICGNKANVEKIQNWLKNWPKSRKYNFQKRGADGSGGY--RAI 377
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+I+G G+GKT A+HL A++ +D ++ T EN V
Sbjct: 378 IISGPPGIGKT-----TAAHLAAKMEGYDV------------IESNASDTRSKKLIENGV 420
Query: 242 ERIRRYGSTSPSIPGESKSS------AILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHI 294
+ S G+ K + +L++D++ +G +A +R + + T +
Sbjct: 421 SEVMTNTSLLGFFGGDGKHADARKKKIVLVMDEV---DGMSAGDRGGVGTMAKFCKKTEV 477
Query: 295 PTAVVLTE--CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
P ++ E K D A + Q VD I+ + IC +E
Sbjct: 478 PLILICNERRLPKMKPFDHVAFDI-KFQRPTVD--------------QIRSRIMTICHRE 522
Query: 353 QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+ ++ + + SG DIRQ I + + L Q M
Sbjct: 523 GLKIPPPVVNALIEGSGRDIRQIINMIFTAKLDQTTM 559
>gi|294496335|ref|YP_003542828.1| replication factor C small subunit [Methanohalophilus mahii DSM
5219]
gi|292667334|gb|ADE37183.1| replication factor C small subunit [Methanohalophilus mahii DSM
5219]
Length = 318
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 110/253 (43%), Gaps = 51/253 (20%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTA 193
+++W EKY+P LE++ Q +E +R++ + + N+ L+ +G GVGKTA
Sbjct: 3 EEIWIEKYRPYRLEDVVGQSDAIERLRSYIK----------TNNLPHLLFSGPPGVGKTA 52
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPS 253
T IA L +W + E + + G++ +I+ + TSP
Sbjct: 53 TAVSIARELFGD--DWREN----FTELNASDERGIDVVRT---------KIKNFAKTSPI 97
Query: 254 IPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
+ K I+ +D D + ++A R + R T+ C S +
Sbjct: 98 GGADFK---IIFLDEADALTPDAQSALRRTME------RYTN--------NCRFILSCNY 140
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+++ E +QS P+++ +I + I +E ++ + I+ + + GD
Sbjct: 141 SSKIIEPIQSRCA-----VYRFRPLSDDAIGKRCRHIAEKEGLDIADDGIEAIKYVAEGD 195
Query: 372 IRQAITSLQFSSL 384
+R+AI ++Q +S+
Sbjct: 196 MRKAINAVQAASM 208
>gi|288931716|ref|YP_003435776.1| Replication factor C [Ferroglobus placidus DSM 10642]
gi|288893964|gb|ADC65501.1| Replication factor C [Ferroglobus placidus DSM 10642]
Length = 321
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 43/244 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+P++L+E+ Q + ++ ++++ +++ + L+ G G GKTAT
Sbjct: 4 EIWVEKYRPKTLDEVVGQDEIIQRLKSYVKQK--------NIPHLLFAGPPGTGKTATAI 55
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A L +W+E E +D + +I+ + T+P I G
Sbjct: 56 ALARDLFGE----------VWRENFIEMNASDE--RGIDVVRH---KIKEFARTAP-IGG 99
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
L D + + A L R+ + + V C S + ++
Sbjct: 100 APFKIIFLDEADALTADAQAA----------LRRTMEMYSKV----CRFILSCNYVSRII 145
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E +QS P+ ++K+ L +I E + E ++++ SGGD R+AI
Sbjct: 146 EPIQS-----RCAVFKFKPVPKEAMKKRLKEIAENEGLEIDDEALEVLIYISGGDFRKAI 200
Query: 377 TSLQ 380
+LQ
Sbjct: 201 NALQ 204
>gi|58260802|ref|XP_567811.1| purine nucleotide binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117247|ref|XP_772850.1| hypothetical protein CNBK2210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255468|gb|EAL18203.1| hypothetical protein CNBK2210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229892|gb|AAW46294.1| purine nucleotide binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1001
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVIT 184
++ QLW KY P SL+E+ + VE + W ++ + K F ++I+
Sbjct: 416 ASAQLWTTKYAPTSLKEICGNKAPVERLGQWLQDWQKNYKANFKKPGKDGMGIYRAVLIS 475
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G G+GKT + +A G E + + T ++ + N +T ++ S LD F
Sbjct: 476 GPPGIGKTTSAHLMAKEAGYTPLELNA-SDTRSKKLIEN-ETNVDNKS-LDGF------F 526
Query: 245 RRYGSTSPSIPG-ESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
+ G + G + S L++D++ +G +A +R L L++ T IP ++
Sbjct: 527 KGQGVGDINAAGLKIDSRTCLIMDEV---DGMSAGDRGGVGALNTLIKKTKIPMILI--- 580
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D T Q + LQS + R+ N I+ + I +E+ + +D
Sbjct: 581 CN-----DRTLQKMKPLQSTTFNMTFRRPQPN-----EIRSRIMSILHKEKLKIPPNVVD 630
Query: 363 LVAQASGGDIRQAITSL 379
+ + DIRQ + L
Sbjct: 631 ELVKGVNSDIRQVLNML 647
>gi|402076630|gb|EJT72053.1| replication factor C subunit 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1081
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 50/267 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE----RLGDSKDKFSTNV-----LVITGQA 187
QLW KY P + + + +V+ ++AW E R D K + + + ++I+G
Sbjct: 477 QLWTSKYAPTQISHICGNKAQVDRIKAWLENWPKSRKYDFKKRGADGMGGERAIIISGPP 536
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+H+ ARL +D + T ++ + N + + TS L F +
Sbjct: 537 GIGKT-----TAAHMAARLAGYDVIESNASDTRSKKLVENGVSDVINNTSLLGFFSGEGK 591
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ E+K + +L++D++ +G +A +R L + + +P ++
Sbjct: 592 KVD-----------ETKKNIVLIMDEV---DGMSAGDRGGVGALAKFCKKSEVPLILICN 637
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-LSTEQ 360
E + +++ D A + N T I+ + IC +E + +
Sbjct: 638 E-----------RRLPKMKPF--DHAAFDIRFNRPTVEQIRSRIMTICHREGLGKMPAQV 684
Query: 361 IDLVAQASGGDIRQAITSLQFSSLKQD 387
ID + + DIRQ I L S+K D
Sbjct: 685 IDALIEGCNKDIRQIINMLH--SIKLD 709
>gi|395645923|ref|ZP_10433783.1| Replication factor C small subunit [Methanofollis liminatans DSM
4140]
gi|395442663|gb|EJG07420.1| Replication factor C small subunit [Methanofollis liminatans DSM
4140]
Length = 322
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 54/276 (19%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+P++LE++ Q + VE +R++ R G S L+ TG AGVGKT
Sbjct: 7 IWIEKYRPQTLEDMVGQEEIVERLRSYV--RSG------SLPHLLFTGPAGVGKTTAAVA 58
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A ++ + ++E + + G++ +I+++ TSP
Sbjct: 59 LAREFFGETWQMN------FRELNASDERGIDVVRN---------QIKQFARTSPLGGAT 103
Query: 258 SKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
K +L +D D + + A R + + T + C + + QS
Sbjct: 104 FK---VLFLDEADALTPDAQAALRRTME--------NYAQTCRFILSCNYSSKIIDPIQS 152
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ + ++ + ++ E+ SL+ + + +A + GD+R+A
Sbjct: 153 RCAIYR-----------FKGLDEAAVAEQVRRVAAAEEISLTDDAVHAIAYIAEGDMRKA 201
Query: 376 ITSLQFSSLKQD----PMLNLSLSISKPNFPEEKAD 407
+ +LQ +++ D M+ + S +K PEE AD
Sbjct: 202 LNALQGAAILSDRIDARMIYETTSTAK---PEEIAD 234
>gi|448630971|ref|ZP_21673426.1| replication factor C large subunit [Haloarcula vallismortis ATCC
29715]
gi|445755345|gb|EMA06735.1| replication factor C large subunit [Haloarcula vallismortis ATCC
29715]
Length = 503
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W D+ D V +I G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKEW-----ADTWDDHREAV-IIHGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W PTI E + ++ + R+ + S ++
Sbjct: 57 ANDMG-----W----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE ++ + +A+ + GD+R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQELAEQNSGDLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|363540633|ref|YP_004894429.1| mg378 gene product [Megavirus chiliensis]
gi|448825330|ref|YP_007418261.1| putative replication factor C small subunit [Megavirus lba]
gi|350611798|gb|AEQ33242.1| putative replication factor C small subunit [Megavirus chiliensis]
gi|444236515|gb|AGD92285.1| putative replication factor C small subunit [Megavirus lba]
Length = 344
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ + + + ++++ E + S L+ G +G GKT+T++
Sbjct: 19 WIEKYRPKDMNHIISHEEITLALKSFIETK--------SLPHLLFFGPSGSGKTSTIKCC 70
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS L +D T + E + + G+E + +NFV + +P E
Sbjct: 71 ASKL------YDKYTDCMILELNASNERGIETVRT--KIKNFVS-----SKNTIFLPMEL 117
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++ L+I D + A LRQ + ++T C D ++ QS
Sbjct: 118 RNIFKLVILDEIDSMTVEAQGMLRQTIEKNSKTTRFCLI-----CNDIDKINLALQSRCS 172
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L +P+ + + + L IC+ E + I+ + S GD+R AI +
Sbjct: 173 L-----------FRFSPLGDNDMYKRLKDICKIENVKYTKGVIEAIINISKGDMRSAINT 221
Query: 379 LQFSSLKQDPMLNLS--LSISKPNFPE 403
LQ +L + M+ ++ IS PE
Sbjct: 222 LQHVNLTVNDMITVNDVYKISGHCMPE 248
>gi|344212534|ref|YP_004796854.1| replication factor C large subunit [Haloarcula hispanica ATCC
33960]
gi|343783889|gb|AEM57866.1| replication factor C large subunit [Haloarcula hispanica ATCC
33960]
Length = 508
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W D+ D V +I G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKKW-----ADTWDDHREAV-IIHGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W PTI E + ++ + R+ + S ++
Sbjct: 57 ANDMG-----W----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE ++ + +A+ + GD+R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQELAEQNSGDLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|322778907|gb|EFZ09323.1| hypothetical protein SINV_15414 [Solenopsis invicta]
Length = 1027
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 135/331 (40%), Gaps = 74/331 (22%)
Query: 70 EGLVNPKRDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSA 129
E LV+PK+ + +S + T + P S + A+ N + +T E LV
Sbjct: 427 ELLVSPKK---IKTSQSSPVKTETSSPVS--KQALDTSNTEQIITSIGSEPLV------- 474
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQR--KKVEE-----VRAWFEERLGDSKDKFST---- 178
EKY+P++++++ Q+ K +R W + R D K K T
Sbjct: 475 -----------EKYRPKTMKQIVGQQGDKSCAHNLYIWLRDWHKNR-QDPKVKNGTAKQT 522
Query: 179 -----NVLVITGQAGVGKTATVRQIASHLGARLYEW---DTPTPTIWQEYMHNCKTGLEY 230
+++G GVGKT TV+ + LG L E+ DT T+ +E + L
Sbjct: 523 HGQSFKAALLSGPPGVGKTTTVQVVCKELGYDLLEFNASDTRNKTLLKEAISGL---LSN 579
Query: 231 TSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVR 290
T+ D ++I S +LL+D++ G L Q L+ L++
Sbjct: 580 TTMKDYVTGTKQKIT--------------SKHVLLMDEVDGMAGNEDRGGL-QELVGLIK 624
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICR 350
T +P + C D + + + D K+ + I+ ++ +C
Sbjct: 625 HTEVPIICI---CN-----DRFNTKVKTISTHSYDLKYSKLRVE-----QIRSSMKSLCF 671
Query: 351 QEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
+E +STE +D + +++ DIRQ I L+F
Sbjct: 672 KENIKISTEDLDRLIESTNHDIRQVINHLEF 702
>gi|164659418|ref|XP_001730833.1| hypothetical protein MGL_1832 [Malassezia globosa CBS 7966]
gi|159104731|gb|EDP43619.1| hypothetical protein MGL_1832 [Malassezia globosa CBS 7966]
Length = 371
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L ++ VE +RA E G+ L+++G G+GKT +V +
Sbjct: 17 WVEKYRPRYLRDVVGNSATVERLRAIEEH--GNCPH------LLLSGLPGIGKTTSVHCL 68
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPGE 257
A L Y+ + LE + D + V +I+ + S+P
Sbjct: 69 AHALLGDAYK----------------EAVLELNASDDRGIDVVRSKIKAFAQKKVSLP-P 111
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ I+L + +T G A + LR+ + + PT C +++ + QS
Sbjct: 112 GRHKIIVLDEADSMTPG--AQQALRRTM-----EIYAPTTRFCFACNQSNKIIEPIQSRC 164
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
+ + I++ + R L +IC E S E + V + GD+RQA+
Sbjct: 165 AI-----------LRFGRISDEELLRRLLQICEAEHVKYSDEGLAAVVFTAEGDMRQAVN 213
Query: 378 SLQ 380
+LQ
Sbjct: 214 NLQ 216
>gi|146304797|ref|YP_001192113.1| replication factor C large subunit [Metallosphaera sedula DSM 5348]
gi|145703047|gb|ABP96189.1| replication factor C large subunit [Metallosphaera sedula DSM 5348]
Length = 443
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 40/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P++L+++ Q +E+R+W + L S S+ +++ G G GKT+ +
Sbjct: 5 WVVKYRPKTLDDVENQEDVKDELRSWIDSWLKGSP---SSTAVMLYGPPGTGKTSLAIAL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ L E T T L VER S S S+ G
Sbjct: 62 ANTYKLELVE-----------------TNASDTRNLTSLRAIVER----ASISGSLFG-- 98
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++ +D++ + + + +L ++++T P + D + +
Sbjct: 99 IRGKLIFLDEVDGIQPKQDYGAV-SAILEIIKNTKYPILMAAN--------DPWNPNLRD 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L++ + + + + +++R L KIC E+ +D + +AS GD R AI
Sbjct: 150 LRN-----AVKMIEVKKLGKIAMRRLLKKICSGEKIKCEDNALDQIIEASDGDSRYAINF 204
Query: 379 LQ 380
LQ
Sbjct: 205 LQ 206
>gi|344231186|gb|EGV63068.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 325
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+ + + VE RL + + ++I+G G+GKT ++ +
Sbjct: 13 WVEKYRPHKLDNIVGNEETVE--------RLKLIANDGNMPHMIISGLPGIGKTTSIHCL 64
Query: 199 ASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A L G LY+ T LE + D + V RI+++ T +P
Sbjct: 65 ALELLGPELYKSAT----------------LELNASDDRGIDVVRNRIKQFAQTKIQLP- 107
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I+L + +T G A + LR+ + + +T A C ++ +
Sbjct: 108 PGRHKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CNQSSKI------I 154
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E LQS + N + + + L ++C+ E +TE + + + GD+RQAI
Sbjct: 155 EPLQS-----RCAILRYNKLADDQVLTRLLEVCKLENVQFNTEGLQALIFTAEGDMRQAI 209
Query: 377 TSLQ 380
+LQ
Sbjct: 210 NNLQ 213
>gi|150864993|ref|XP_001384033.2| hypothetical protein PICST_35815 [Scheffersomyces stipitis CBS
6054]
gi|149386249|gb|ABN66004.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 764
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 35/262 (13%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITG 185
+++LW KY P +++L + +V++++ W ++K F +I+G
Sbjct: 204 SEKLWTVKYAPSRIDQLCGNKGQVQKLQNWLSNWFDNAKKDFKVPGRDGSGIYRACLISG 263
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT+ +A LG + E + N K+ L TS + F++ E I+
Sbjct: 264 PPGIGKTSAAHLVAKSLGFDILEKNASDVRSKSLLNSNLKSVLTNTSVVGFFKHRDENIQ 323
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ-CLLLLVRSTHIPTAVVLTECG 304
++ L++D++ +G ++ + L + TH+P ++ C
Sbjct: 324 HT---------QNDRRFCLIMDEV---DGMSSGDHGGAGALSAFCKITHMPMILI---CN 368
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
D + + +D R+ + +K L I +E+ L I +
Sbjct: 369 -----DKSLPKMRTFDRVTLDLPFRRP-----SEAEMKSRLMSIALREKIKLDPTVIGQL 418
Query: 365 AQASGGDIRQAITSLQFSSLKQ 386
QA+G DIRQ I L S Q
Sbjct: 419 VQATGNDIRQIINLLSTVSKTQ 440
>gi|408383245|ref|ZP_11180782.1| replication factor C large subunit [Methanobacterium formicicum DSM
3637]
gi|407814027|gb|EKF84665.1| replication factor C large subunit [Methanobacterium formicicum DSM
3637]
Length = 505
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 102/261 (39%), Gaps = 45/261 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY P++++++ +K +EE+ W E K L++ G G GKT
Sbjct: 2 LWTEKYSPQTMKDVLGNKKAIEEIENWLENWDHGEPQK----CLLLVGPPGTGKTTL--- 54
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+HL AR E+ + + D N + S S S+ G+
Sbjct: 55 --AHLVAR-------------EFSDHIELNASDKRSYDIIMNTIGE----ASASVSLFGQ 95
Query: 258 SKSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
I+L +D L R + + +++ H P ++ D ++
Sbjct: 96 GGRKLIILDEVDGLHGNEDRGGIRAINK----IIKEGHHPMIMMAN--------DLYSKR 143
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ L+S RKV N SI L KIC +E + +A+ S GD+R A
Sbjct: 144 IQSLKSKCQLIKIRKVHTN-----SIVALLKKICIKEGVDFEEHVLRTLAKRSRGDLRSA 198
Query: 376 ITSLQFSSLKQDPMLNLSLSI 396
I LQ + +D + + L +
Sbjct: 199 INDLQVIAQGKDSITSDDLKV 219
>gi|358056280|dbj|GAA97763.1| hypothetical protein E5Q_04442 [Mixia osmundae IAM 14324]
Length = 382
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 117/271 (43%), Gaps = 50/271 (18%)
Query: 113 LTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDS 172
+T S+ +G N D D + + W EKY+P L+++ + +E ++ R G+
Sbjct: 39 MTESKGKGRANGDTDDGPVA--YEMPWVEKYRPAVLDDIVGNEETIERLKVI--ARDGNC 94
Query: 173 KDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
++I+GQ G+GKT ++ +A L + Y K G+ +
Sbjct: 95 PH------IIISGQPGIGKTTSILALAHALLGKAY-----------------KEGVLELN 131
Query: 233 KLDE--FENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVR 290
DE + RI+ + ++P + I+L + +T G A + LR+ + +
Sbjct: 132 ASDERGIDVVRNRIKTFAQKKVTLPA-GRHKIIILDEADSMTPG--AQQALRRTMEIYSN 188
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQS-ILVDAGARKVALNPITNGSIKRTLSKIC 349
+T A C +++ + E +QS + AR +++ + + + +IC
Sbjct: 189 TTRFALA-----CNQSNKI------IEPIQSRCAILRYAR------LSDKQLLKRIVEIC 231
Query: 350 RQEQYSLSTEQIDLVAQASGGDIRQAITSLQ 380
EQ S + + + S GD+RQAI +LQ
Sbjct: 232 DMEQVKYSDDALASLIFTSDGDMRQAINNLQ 262
>gi|297527206|ref|YP_003669230.1| AAA ATPase central domain-containing protein [Staphylothermus
hellenicus DSM 12710]
gi|297256122|gb|ADI32331.1| AAA ATPase central domain protein [Staphylothermus hellenicus DSM
12710]
Length = 423
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 41/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P+ + ++ Q K ++ W E L K K S ++ G AG GKT+ V
Sbjct: 7 WIIKYRPKKIADVVNQDKAKKQFIQWLESWL---KGKPSKKAALLYGPAGCGKTSLVEAA 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + ++ + D +ERI + ++ S+
Sbjct: 64 ANEYGLEIVEMNAS----------------DFRRRQD-----IERIAKTAASMRSLFARG 102
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+L+D++ +G TA + +L L+ T P VV+T D Q
Sbjct: 103 K---IILLDEVDGISG-TADKGAIYAILHLLEITRYP--VVMTANNPWD------QKLRP 150
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+ + ++ +T ++ L +IC+ E+ + +A+ S GD+R AI
Sbjct: 151 LRD-----ASLMISFKRLTERNVVIVLKRICQFEKLECEDAALKEIARRSEGDLRSAIND 205
Query: 379 LQ 380
LQ
Sbjct: 206 LQ 207
>gi|164654986|ref|XP_001728625.1| hypothetical protein MGL_4224 [Malassezia globosa CBS 7966]
gi|159102506|gb|EDP41411.1| hypothetical protein MGL_4224 [Malassezia globosa CBS 7966]
Length = 621
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 105/277 (37%), Gaps = 64/277 (23%)
Query: 138 LWAEKYKPRSLEELA----VQRKKVEEVRAWFEERLG--------------------DSK 173
+W EKY+PR+ +L + R+ + ++ W G D
Sbjct: 1 MWVEKYRPRAFTDLMGDDRLHRETLRWLKTWDPCVFGRDAPPPSARSARGNEPSTTTDQH 60
Query: 174 DKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK 233
+ VL+++G G+GKT +A H G R+YE + + + ++ LE
Sbjct: 61 GRPHERVLLMSGPPGLGKTTLAHVVAQHAGYRVYEMNASDARTAGDVHNRVRSALE---- 116
Query: 234 LDEFENFVERIRRYGSTSPSIPGESKSSAILL--IDDLPVTN---GRTAFER-LRQCLLL 287
S S+ G + + +++ ID N G T F R L Q +
Sbjct: 117 -----------------SDSLQGHGRPTLVVIDEIDGAMGGNEALGTTGFVRALVQLIER 159
Query: 288 LVRSTHIPTAV---VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRT 344
RS+H + ++ C D A + L+ + AR V + I R
Sbjct: 160 GARSSHKTRPLLRPIVCICN-----DLYAPALRPLRPL-----ARIVRFHRPPTPMITRR 209
Query: 345 LSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
L +IC +E + + ++ S GDIR + +L+
Sbjct: 210 LREICARECLAADARGLTMLCDVSHGDIRACLHTLEL 246
>gi|237839249|ref|XP_002368922.1| replication factor C subunit, putative [Toxoplasma gondii ME49]
gi|211966586|gb|EEB01782.1| replication factor C subunit, putative [Toxoplasma gondii ME49]
Length = 1260
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 46/283 (16%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-------------RLG 170
PD + +S T LWAEKY+P+ +++ R+ + ++ W +
Sbjct: 593 PDRHHSDENSGTL-LWAEKYRPKRADDVVGNREHLRTLQTWLADWADVCLHGIKKKPPPR 651
Query: 171 DSKDKFS-----------TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE 219
S FS +++G G+GKT R A G + E++ + +
Sbjct: 652 SSAPSFSPYGFAPTINLNARAALLSGPPGIGKTTAARLAAEAAGYDVLEYNA---SDARN 708
Query: 220 YMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFE 279
H G TS +F+++ SP + A +L+D++ +G + +
Sbjct: 709 KAHIEDIG-NMTSGGLTLHSFLDQKNEASRGSPGRNAKRPMGACVLMDEV---DGLSGGD 764
Query: 280 RL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITN 338
R Q ++ L+ ++ P + D + S +D + +P
Sbjct: 765 RGGAQAIVKLIETSKCPIICICN--------DRMHPKVRTIASKCLD-----LRFHPPHM 811
Query: 339 GSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
+++ + KI E SL + +D + +++GGD+RQ +TSLQ
Sbjct: 812 AALRSRVEKIAAAEDLSLDPQAVDYLCESAGGDLRQILTSLQM 854
>gi|346326610|gb|EGX96206.1| DNA replication factor C subunit Rfc1, putative [Cordyceps
militaris CM01]
Length = 1028
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 110/270 (40%), Gaps = 41/270 (15%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNV 180
S++ QL KY P L + + +VE+++AW F++R D
Sbjct: 446 SATPTQLLTSKYAPTQLNHICGNKGQVEKIQAWLRNWPKAKKYNFQKRGADGLG--GERA 503
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++I+G G+GKT A+HL A+L +D + + + ++ + + + N
Sbjct: 504 IIISGPPGIGKT-----TAAHLAAKLEGYD-----VLESNASDARSKKLVETGVSDVMNN 553
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVV 299
+ + ++ +K +L++D++ +G + +R + + T +P ++
Sbjct: 554 TSLLGFFAGDGKNV-DTTKKKIVLIMDEV---DGMSGGDRGGVGAMAKFCKKTEVPLILI 609
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
E + +++ D A V N T ++ + IC +E L
Sbjct: 610 CNE-----------RRLPKMKPF--DHVAFDVRFNRPTVEQVRSRIMTICHREGLKLPPP 656
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+D + + S DIRQ I + + L Q M
Sbjct: 657 VVDALIEGSNKDIRQIINMISTAKLDQTSM 686
>gi|354545639|emb|CCE42366.1| hypothetical protein CPAR2_200090 [Candida parapsilosis]
Length = 320
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 43/243 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + +E ++ ++ G+ + ++I+G G+GKT +V +
Sbjct: 9 WVEKYRPHVLDDIVGNEETIERLKIIVQD--GNMPN------MIISGLPGIGKTTSVHCL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIPGE 257
A L + +E+ H + LE + D + V +I+++ T S+P
Sbjct: 61 AYEL-------------LGKEHYH--QATLELNASDDRGIDVVRNKIKQFAQTKISLP-P 104
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++ I+L + +T G A + LR+ + + +T A C ++ + E
Sbjct: 105 GRTKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CNQSSKI------IE 151
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
LQS + N +++ + + L I + E + E + + ++ GD+RQAI
Sbjct: 152 PLQS-----RCAILRYNKLSDEEVLKRLLDIIKSENVQYNNEGLQALIFSAEGDMRQAIN 206
Query: 378 SLQ 380
+LQ
Sbjct: 207 NLQ 209
>gi|218884001|ref|YP_002428383.1| replication factor C large subunit [Desulfurococcus kamchatkensis
1221n]
gi|218765617|gb|ACL11016.1| replication factor C large subunit [Desulfurococcus kamchatkensis
1221n]
Length = 426
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 63/318 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P++L+E+ Q + ++ W K K S ++ G G GKT+ V +
Sbjct: 8 WIIKYRPKTLDEVVNQDEAKSKLLEWLSSW---EKGKPSKKAALLHGPPGCGKTSLVEAL 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G +L LE + + +ERI + S S ++ G
Sbjct: 65 ARSKGYQL---------------------LEMNASDARRKEDIERIVKLASRSGALTGSR 103
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+L+D++ + R + + L+ +++ + P +++T + + +Q
Sbjct: 104 K---IILLDEVDGMDVRADAGGV-EALVEVIKVSANP--IIMT------ANNPYSQMLRP 151
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+ + + +A +T + L +IC E+ + +D +A+ S GD+R AI
Sbjct: 152 LREL-----SEMIAFKRLTPRDVVTVLKRICSAEKLVCEDQALDEIAKRSEGDLRSAIND 206
Query: 379 LQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK--- 435
L+ + + ++L + K S RD T + + AL K +++
Sbjct: 207 LEAMAGASE---RITLGLVK--------------SFSTYRDRTYAPYEALQKLFNSRYIF 249
Query: 436 --RETDNLVKMDQDAFVV 451
RE + D F+V
Sbjct: 250 QAREAPTSTDLTPDEFMV 267
>gi|429220520|ref|YP_007182164.1| AAA ATPase [Deinococcus peraridilitoris DSM 19664]
gi|429131383|gb|AFZ68398.1| AAA ATPase [Deinococcus peraridilitoris DSM 19664]
Length = 427
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 69/299 (23%)
Query: 140 AEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIA 199
AE+ +PR+L+E+ QR+ + + RL +S N L++ G GVGKT R +A
Sbjct: 11 AERLRPRTLDEVVGQRQLLGPGKPL--RRLLESG---RLNSLILWGPPGVGKTTLARLVA 65
Query: 200 SHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESK 259
++ A T + + + +DE E V R R
Sbjct: 66 QYVKAHFISLSAVTAGVK-----------DVRAAVDEAERRVARGER------------- 101
Query: 260 SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ--SFE 317
IL +D++ F + +Q LL H+ E G + +T + SFE
Sbjct: 102 --TILFLDEI------HRFNKAQQDALL----PHV-------ERGLLTLIGATTENPSFE 142
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ----YSLSTEQIDLVAQASGGDIR 373
++ + AR + L P++ ++ LS+ R E+ S E +DL+A+ S GD R
Sbjct: 143 VNPAL--RSRARTLVLEPLSFEDVRDLLSRALRDERGLPGVDASDEALDLLARLSDGDAR 200
Query: 374 QAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGF--SIQFGRDETLSLFHALGK 430
+A+ +L+ ++ S+ P PE D +G ++ G ++ +L AL K
Sbjct: 201 RALGTLEVAA-----------SLGNPVTPELVTDAYGKHLPAMDKGGEDFYNLISALHK 248
>gi|241955893|ref|XP_002420667.1| AAA ATPase family member, putative; replication factor C (RF-C)
subunit, putative [Candida dubliniensis CD36]
gi|223644009|emb|CAX41749.1| AAA ATPase family member, putative [Candida dubliniensis CD36]
Length = 339
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 47/248 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +LEE+ Q++ V+ VR + E R L+ G G GKT+T+ +
Sbjct: 11 WVEKYRPDNLEEVKGQQEIVDTVRKFVETR--------KLPHLLFYGPPGTGKTSTIIAL 62
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A + + D + E + G++ ++ +NF R+ + + SI +
Sbjct: 63 AKEIYGSINYKD-----MILELNASDDRGIDVVR--NQIKNFAST-RQIFTKNNSINNDQ 114
Query: 259 KSSAILLIDDLPVTNGRTAFERL-----RQC-LLLLVRSTHIPTAVVLTECGKADSVDST 312
IL D + + R+ + C +L +H +++ C
Sbjct: 115 FKLIILDEADAMTNIAQNSLRRVIEKFTKNCRFCILANYSHKLNPALISRC--------- 165
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
+ PI +IK L+ + +E ++S++ ID + + S GD+
Sbjct: 166 ----------------TRFRFTPIDISAIKDRLNIVIIKENVNISSDAIDALLKLSNGDM 209
Query: 373 RQAITSLQ 380
R+A+ LQ
Sbjct: 210 RRALNVLQ 217
>gi|354610609|ref|ZP_09028565.1| Replication factor C large subunit [Halobacterium sp. DL1]
gi|353195429|gb|EHB60931.1| Replication factor C large subunit [Halobacterium sp. DL1]
Length = 495
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 48/245 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN--VLVITGQAGVGKTATVR 196
W EKY+P SL E+ K + +R W D ++ + ++ G G+GKT+
Sbjct: 4 WTEKYRPSSLSEVRGNNKARDALREW--------ADTWADHGEAAILHGSPGIGKTSAAH 55
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A+ G WD +E + + VER+ + S ++ G
Sbjct: 56 ALAADEG-----WDV----------------VELNASDQRTADVVERVAGEAAKSGTLTG 94
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKADSVDSTAQS 315
S ++++D+ +G +R + LV+ P ++ E
Sbjct: 95 GSGGRKLVVMDEADNLHGN--VDRGGSAAITRLVKEATQPIVLIANE------------- 139
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ ++ + + +A R + ++ SI L ICR+E + E ++ +A+ + GD+R A
Sbjct: 140 YYDMSNGVRNA-CRDIEFRDVSKRSIVPVLRDICRREDVAYDDEALEAIAEQNSGDLRSA 198
Query: 376 ITSLQ 380
+ LQ
Sbjct: 199 VNDLQ 203
>gi|327311922|ref|YP_004338819.1| replication factor C small subunit [Thermoproteus uzoniensis
768-20]
gi|326948401|gb|AEA13507.1| replication factor C small subunit [Thermoproteus uzoniensis
768-20]
Length = 322
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 49/252 (19%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
++ W EKY+PRS EE+ +EEV+A RL + + L+ G G GKT
Sbjct: 2 SELFWFEKYRPRSFEEVV----DLEEVKA----RLKEFVKAGNMPHLLFYGPPGTGKTTM 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPS 253
+A L W+E LE + + N + ER++ + T+P
Sbjct: 54 ALVLARELYG----------DAWRE------NTLELNASDERGINVIRERVKEFARTAPV 97
Query: 254 IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE--CGKADSVDS 311
K+ L+I D A + LR+ + + +T ++L G + + S
Sbjct: 98 ----GKAPFKLVILDEADNMTSDAQQALRRIMEMYANTTRF---ILLANYVSGIIEPIQS 150
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
F +P+ ++ L I QE +S E +D + + GD
Sbjct: 151 RCAIFR---------------FSPLPKEAVLSRLRFIAEQEGVKISQEALDAIFDFTQGD 195
Query: 372 IRQAITSLQFSS 383
+R+AIT+LQ +S
Sbjct: 196 MRRAITALQIAS 207
>gi|405119275|gb|AFR94048.1| purine nucleotide binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 1003
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVIT 184
++ QLW KY P SL+E+ + VE + W ++ + K F ++I+
Sbjct: 418 ASAQLWTTKYAPTSLKEICGNKAPVERLGQWLQDWQKNYKANFKKPGKDGMGVYRAVLIS 477
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G G+GKT + +A G E + + T ++ + N +T ++ S LD F
Sbjct: 478 GPPGIGKTTSAHLMAKEAGYIPLELNA-SDTRSKKLIEN-ETNVDNKS-LDGF------F 528
Query: 245 RRYGSTSPSIPG-ESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
+ G + G + S L++D++ +G +A +R L L++ T IP ++
Sbjct: 529 KGQGVGEINAAGLKIDSRTCLIMDEV---DGMSAGDRGGVGALNTLIKKTKIPMILI--- 582
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D T Q + LQS + R+ N I+ + I +E+ + +D
Sbjct: 583 CN-----DRTLQKMKPLQSTTFNMTFRRPQPN-----EIRSRIMSILHKEKLKIPPNVVD 632
Query: 363 LVAQASGGDIRQAITSL 379
+ + DIRQ + L
Sbjct: 633 ELVKGVNSDIRQVLNML 649
>gi|432328759|ref|YP_007246903.1| DNA polymerase III, gamma/tau subunit [Aciduliprofundum sp.
MAR08-339]
gi|432135468|gb|AGB04737.1| DNA polymerase III, gamma/tau subunit [Aciduliprofundum sp.
MAR08-339]
Length = 320
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 101/254 (39%), Gaps = 43/254 (16%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
+ +W EKY+P++L+E+ Q++ VE ++++ + + S L+ G AG GKT
Sbjct: 2 EDVWVEKYRPKNLDEVVGQKEIVERLKSYVKAK--------SMPHLLFAGPAGTGKTTCA 53
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
+A L W+ H E + +I+ Y T+ P
Sbjct: 54 IALARELFG----------DNWRSSFHELNASDERGIGI-----VRTKIKEYARTAA--P 96
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
+ I L + +T A LR+ + + R+ C S + +++
Sbjct: 97 NDVGFKIIFLDEADALTPDAQA--ALRRTMEMYSRT-----------CRFILSCNYSSKI 143
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
E +QS P+ IK+ L I E ++ + +D + S GD+R+A
Sbjct: 144 IEPIQS-----RCAVFRFTPLKAEDIKKRLRYIAENEGKEITDDALDAIVYISSGDMRKA 198
Query: 376 ITSLQFSSLKQDPM 389
I LQ S+ D +
Sbjct: 199 INILQMSAAISDTI 212
>gi|190345075|gb|EDK36893.2| hypothetical protein PGUG_00991 [Meyerozyma guilliermondii ATCC
6260]
Length = 708
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 43/268 (16%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLV 182
++S+ LW KY P+ +L + ++ ++++W ++K F +
Sbjct: 148 TTSSADLWTVKYAPKDTSQLCGNKGQINKLQSWLASWFDNAKSGFKNPGSDGSGVFRACL 207
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
I+G G+GKT+ +A +LG + E + N K+ L TS + F++ +
Sbjct: 208 ISGPPGIGKTSAAHLVAHNLGYDVLEKNASDVRSKSLLNSNLKSVLSNTSVVGFFKHQHD 267
Query: 243 RI----RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAV 298
+ RR+ + G S D +AF R+ L+L+
Sbjct: 268 QASVNDRRFCIIMDEVDGMSSG-------DHGGAGALSAFCRITSMPLILI--------- 311
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
C D + + +D R+ T ++ L I +E+ L
Sbjct: 312 ----CN-----DKSLPKMRTFDRVTLDLPFRRP-----TENEVRSRLMTIALREKIKLDP 357
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQ 386
I + QA+G DIRQ IT L S Q
Sbjct: 358 TVIGQLVQATGNDIRQMITMLATVSRTQ 385
>gi|344228229|gb|EGV60115.1| DNA replication factor C, large subunit [Candida tenuis ATCC 10573]
Length = 774
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 51/313 (16%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVI 183
S+ +LW KY P S +L + +V ++R+W ++K+ F +I
Sbjct: 220 SNDDKLWTTKYAPTSTLQLCGNKGQVNKLRSWLLHWFDNAKNDFKDPGADGSGVFRACLI 279
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
+G G+GKT IA LG + E + + K+ L TS + F+N
Sbjct: 280 SGPPGIGKTTAAHLIAEDLGFDVLEKNASDVRSKSLLNSDIKSVLNNTSVMGFFQN---- 335
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ-CLLLLVRSTHIPTAVVLTE 302
R+ + E++ L++D++ +G ++ + L R T +P ++
Sbjct: 336 --RHA----DVHQENERRFCLIMDEV---DGMSSGDHGGAGALSQFCRITKMPMILICN- 385
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
D + + D R+ + N +K + IC +E+ + I
Sbjct: 386 -------DKSLPKMRTFDRVTYDLAFRRPSEN-----EVKARIMTICHREKIKIDPSIIG 433
Query: 363 LVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETL 422
+ Q + DIRQ M+NL ++SK A+ FS + + L
Sbjct: 434 QLVQTTNNDIRQ--------------MINLLSTVSKTQ-KTIGAEQSKDFSKSWQKQTVL 478
Query: 423 SLFHALGKFLHNK 435
F +GK L+ +
Sbjct: 479 KPFDIVGKLLNGQ 491
>gi|154281839|ref|XP_001541732.1| hypothetical protein HCAG_03830 [Ajellomyces capsulatus NAm1]
gi|150411911|gb|EDN07299.1| hypothetical protein HCAG_03830 [Ajellomyces capsulatus NAm1]
Length = 1066
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 46/269 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW KY P SL + + VE+++ W S F ++I G
Sbjct: 468 RLWTSKYAPTSLSMICGNKGAVEKLQTWLRNWRNSSMADFKKGGKDGTGIYRAVMIHGPP 527
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 528 GIGKT-----TAAHLVAKLENYDVVESNASDTRSKSLVETGLRGVLDTTSLQGY--FSGE 580
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
++ S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 581 GKKVES--------GKKNLVLIMDEV---DGMSAGDRGGVGALAAVAKKTRIPMILICNE 629
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ + I+ LS IC +E + + +D
Sbjct: 630 --------RRLPKMRPFDSVTFDLPFRRPTVE-----QIRARLSTICYREGLKIPPQVLD 676
Query: 363 LVAQASGGDIRQAITSLQFSSLKQDPMLN 391
+ Q + DIRQ I L + L Q P L+
Sbjct: 677 NLIQGTHADIRQVINMLSTAKLDQ-PTLD 704
>gi|164656897|ref|XP_001729575.1| hypothetical protein MGL_3119 [Malassezia globosa CBS 7966]
gi|159103468|gb|EDP42361.1| hypothetical protein MGL_3119 [Malassezia globosa CBS 7966]
Length = 480
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 126/335 (37%), Gaps = 104/335 (31%)
Query: 147 SLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARL 206
+L LAV ++KV +VR W E L
Sbjct: 104 TLATLAVHKRKVADVRVWLTEALDG----------------------------------- 128
Query: 207 YEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS---------------TS 251
TPT+ + ++ + S +D F F++ + R+ ++
Sbjct: 129 ------TPTLAKYRAEPEQSVTPFFSVVDRFSAFLQSVLRFAPLPLASRDSNRSWRARST 182
Query: 252 PSIPGESKSS---------AILLIDDLP-VTNGRT------AFERL----RQCLLLLVRS 291
S+ KS+ I+L++D P +T+ RT A ER Q L+L+ S
Sbjct: 183 ASVSLTEKSNDEQKRHRQRRIILVEDWPNLTHERTREGVHRALERFIHSAGQVPLVLIVS 242
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEEL-------QSILVDAGARKVALNPITNGSIKRT 344
+P A T+ D+ ++ ++ +S+ + ++ NP+T I
Sbjct: 243 DTVPRAD--TDANANDTFSWRSRRAVQMNIRMAVPESVRMHPALTEIRFNPLTTRMI--- 297
Query: 345 LSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEE 404
L + Q + ++ +A+A+GGDIR A ++ LK P N+ E
Sbjct: 298 LGALTAQAPSHIPRHVLNAIAEAAGGDIRSATNAVAM--LKNVPPNNVC---------HE 346
Query: 405 KADGHGGFSIQFGRDETLSLFHALGKFLHNKRETD 439
A G S + L LFHALG+ L+NKR D
Sbjct: 347 SAAALGNES-----ESALVLFHALGRVLYNKRAGD 376
>gi|449478938|ref|XP_002194995.2| PREDICTED: ATPase family AAA domain-containing protein 5 [Taeniopygia
guttata]
Length = 2063
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 52/156 (33%)
Query: 88 QLWTNKN-KPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPR 146
L NK KP S+ EH G PS G+ D LW EKY+P+
Sbjct: 1248 HLGKNKTQKPHSVTEHP------GCLSDPSALSGVEKED-----------MLWTEKYQPQ 1290
Query: 147 SLEELAVQRKKVEEVRAW---------------------------------FEERLGDSK 173
EL +K++E + +W F++ D++
Sbjct: 1291 DSSELVGNKKEIERLHSWLKEWKKRADLEEKRNQKREKEDKEQEDSLSSLDFKDNKSDTE 1350
Query: 174 DKFS-TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
++ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1351 EEITLCNTVLITGPPGVGKTAAVYACAQELGFKIFE 1386
>gi|345564995|gb|EGX47951.1| hypothetical protein AOL_s00081g278 [Arthrobotrys oligospora ATCC
24927]
Length = 1029
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 49/265 (18%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVL 181
A QLW KY P +++E+ + +V++++ W + + K F +
Sbjct: 424 AKDPNSQLWTVKYSPATMKEICGNKGQVDKLQKWLQNWPRNLKKNFKMPGPDGSGLYRAV 483
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDT----PTPTIWQEYMHNCKTG-LEYTSKLDE 236
+I G GVGKT A+HL A+L +D + T ++ + G L+ S +
Sbjct: 484 MIHGPPGVGKT-----TAAHLVAKLEGYDVLESNASDTRSKKLLDTSLKGVLDNRSLMGY 538
Query: 237 FENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER--LRQCLLLLVRSTHI 294
F +++ +K +L++D++ +G + +R + Q + + R T I
Sbjct: 539 FNAGDKKV-----------DAAKQKIVLIMDEV---DGMSGGDRGGVGQ-MAAICRKTQI 583
Query: 295 PTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
P V+ C D + + D R+ T I+ + IC +E
Sbjct: 584 P---VICICN-----DRRLPKMKPFDHVTYDLQFRRP-----TATEIRTRMMTICYREGL 630
Query: 355 SLSTEQIDLVAQASGGDIRQAITSL 379
LS + ID + + S DIRQ I L
Sbjct: 631 KLSPQAIDSLTEGSHSDIRQIINML 655
>gi|320100775|ref|YP_004176367.1| replication factor C small subunit [Desulfurococcus mucosus DSM
2162]
gi|319753127|gb|ADV64885.1| replication factor C small subunit [Desulfurococcus mucosus DSM
2162]
Length = 347
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 51/267 (19%)
Query: 121 LVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV 180
++ P S S + LWAEKY+PR+L+E+ Q++ V ++ + EE+ S
Sbjct: 12 IIYPWRLKVSGLSEAELLWAEKYRPRTLDEVVNQKEIVVRLKKFVEEK--------SIPH 63
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++ G G GKT +A L LY D +++YM E K++
Sbjct: 64 MLFAGPPGTGKTT----MAHCLAHDLYGDD------YKKYMLELNASDE--RKIEVIRGK 111
Query: 241 VERIRRYGSTSPSIPGESKSSAILLID-DLPVTNGRTAFERLRQCLLLLVR---STHIPT 296
V+ R + GE +LL + D + + A RL + R + + P+
Sbjct: 112 VKEFAR-----SRVVGEVPFKIVLLDEADNMTADAQQALRRLMELYSATTRFILTANYPS 166
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ + + S F +P+ + L IC E+
Sbjct: 167 KII-------EPIQSRTAIFR---------------FSPLRKEDVVERLRYICNAEKVKC 204
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSS 383
++ + + S GD+R+AI LQ ++
Sbjct: 205 DERALETIYELSEGDMRRAINILQTTA 231
>gi|449705511|gb|EMD45540.1| replication factor C large subunit, putative [Entamoeba histolytica
KU27]
Length = 718
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---EERLGDSKDKFSTNVLVI 183
+S + +S + +W EKY+P++ +L + ++ + W E+ + D + +++
Sbjct: 234 ESTTVINSNEIIWTEKYRPQTKSDLIGNKNQIAKFYTWINKWEKVIPDRR------AVLL 287
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G GVGKT + + LG E++ T E ++R
Sbjct: 288 AGAPGVGKTTVSKIVGKTLGFNPIEFNASD-----------------TRNKSSIELAIKR 330
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTE 302
I G SI G ++++D++ +G ++ +R L+ ++ T P
Sbjct: 331 IFLNGQI--SIDGSKNKKPLIIMDEV---DGMSSGDRGGITELVKYIKETEQPIV----- 380
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D +D Q L ++ K++++ +T L IC +E +S E ++
Sbjct: 381 CICNDIMDKKMQP---LINVCETINFSKISVSELT-----ERLKYICDKEGVHVSDENLN 432
Query: 363 LVAQASGGDIRQAITSLQ 380
+A + GD+R I LQ
Sbjct: 433 QIASKAHGDVRYGINMLQ 450
>gi|221483441|gb|EEE21760.1| replication factor C subunit, putative [Toxoplasma gondii GT1]
Length = 1260
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 113/283 (39%), Gaps = 46/283 (16%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-------------RLG 170
PD + +S T LWAEKY+P+ ++ R+ + ++ W +
Sbjct: 593 PDRHHSDENSGTL-LWAEKYRPKRADDFVGNREHLRTLQTWLADWADVCLHGIKKKPPPR 651
Query: 171 DSKDKFS-----------TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE 219
S FS +++G G+GKT R A G + E++ + +
Sbjct: 652 SSAPSFSPYGFAPTINLNARAALLSGPPGIGKTTAARLAAEAAGYDVLEYNA---SDARN 708
Query: 220 YMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFE 279
H G TS +F+++ SP + A +L+D++ +G + +
Sbjct: 709 KAHIEDIG-NMTSGGLTLHSFLDQKNEASRGSPGRNAKRPMGACVLMDEV---DGLSGGD 764
Query: 280 RL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITN 338
R Q ++ L+ ++ P + D + S +D + +P
Sbjct: 765 RGGAQAIVKLIETSKCPIICICN--------DRMHPKVRTIASKCLD-----LRFHPPHM 811
Query: 339 GSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
+++ + KI E SL + +D + +++GGD+RQ +TSLQ
Sbjct: 812 AALRSRVEKIAAAEDLSLDPQAVDYLCESAGGDLRQILTSLQM 854
>gi|291333464|gb|ADD93165.1| putative ATPase family associated with various cellular activities
AAA [uncultured archaeon MedDCM-OCT-S05-C724]
Length = 321
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 117/307 (38%), Gaps = 63/307 (20%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
+Q+W EKY+P +L E+ Q ++ + +E S L+ G AG+GKT +
Sbjct: 2 EQIWIEKYRPNNLSEVVGQEAVTTRLKNYVKES--------SMPHLLFAGPAGIGKTTSA 53
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
+A + L WQ +H E +D +I+ + T+P
Sbjct: 54 LALAREMFGEL----------WQHNLHELNASDE--RGIDVVRG---KIKEFARTAPL-- 96
Query: 256 GESKSSAILLIDDLPVTNG-------RTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
GE K I+ +D+ G RT + R C ++ S + + ++ D
Sbjct: 97 GE-KGFKIIFLDEADALTGAAQAALRRTMEKYSRTCRFVM--SCNYSSKII-------DP 146
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+ S F PI +++ L + +E ++ E + + +
Sbjct: 147 IQSRCAVFR---------------FRPIKAEDLEKYLKFVASKENVKVTKEAFESLTYLA 191
Query: 369 GGDIRQAITSLQF-SSLKQDPMLNLSLSISKPNFPEEKADG-----HGGFSIQFGRDETL 422
GD+R+AI LQ ++ K + ++ PEE D G FS + +TL
Sbjct: 192 QGDLRRAINGLQMAAAAKTEVTPDVVYQAVAAARPEEVKDALESALAGNFSTAREKLDTL 251
Query: 423 SLFHALG 429
+ + L
Sbjct: 252 QITYGLA 258
>gi|392569013|gb|EIW62187.1| DNA replication factor C large subunit [Trametes versicolor
FP-101664 SS1]
Length = 1006
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 36/262 (13%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGD------SKDKFSTNV- 180
+++ +++ QLW ++Y P++L+E+ + +VE+++ W G K N+
Sbjct: 421 TSAKPAASNQLWTQRYAPQTLKEICGNKGQVEKLQEWLGSWSGSLQCGFKKPGKNGMNIY 480
Query: 181 --LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
+++TG G+GKT + +HL A+L + TP K +E ++ +
Sbjct: 481 RAVMVTGPPGIGKTTS-----AHLCAKLAGF---TPIELNASDARSKKLVENSTNI--MN 530
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTA 297
++ G + ++ + L++D++ +G +A +R L L++ T IP
Sbjct: 531 ASLDGWMHGGHATNAVGMTITDKSCLIMDEV---DGMSAGDRGGVGALCALIKKTKIPII 587
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
+ + G AQ + L ++ + R+ I + R LS I +E+ +
Sbjct: 588 CIANDRG--------AQKLKPLTNVTFNLSYRRPEATAIRS----RILS-IAFKEKLKIP 634
Query: 358 TEQIDLVAQASGGDIRQAITSL 379
ID + Q + DIRQ + L
Sbjct: 635 ANVIDQLVQGAQSDIRQVLNML 656
>gi|52317098|ref|NP_999902.2| replication factor C subunit 4 [Danio rerio]
gi|49619077|gb|AAT68123.1| replication factor C subunit RFC4 [Danio rerio]
Length = 358
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ ++E+A Q EEV A ++ L + L+ G G GKT+T+
Sbjct: 35 WVEKYRPKCVDEVAFQ----EEVVAVLKKSLEGA----DLPNLLFYGPPGTGKTSTILAA 86
Query: 199 ASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENF-VERIRRYGSTSPSIP 255
A L G LY E + + G++ K+ F V R G T P
Sbjct: 87 ARELYGPDLYRQRV------LELNASDERGIQVVREKVKRFAQLTVAGTRPDGKTCPPF- 139
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
I+++D+ A LR+ + R+T C + V ++
Sbjct: 140 ------KIIILDEADSMTS-AAQAALRRTMEKESRTTRF--------CLICNYV---SRI 181
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
E L S K P+ N + + +ICR+E +TE +D + + S GD+R+A
Sbjct: 182 IEPLTS-----RCSKFRFKPLANDVQQERILEICRKENLKYTTEGVDALVRVSEGDLRKA 236
Query: 376 ITSLQ 380
IT LQ
Sbjct: 237 ITFLQ 241
>gi|390594938|gb|EIN04346.1| DNA replication factor C large subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 869
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 36/271 (13%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STNV-- 180
A ++ QLW ++Y P++L+E+ + +VE+++ W + K F NV
Sbjct: 327 AKPVDASTQLWTQRYAPQTLKEICGNKSQVEKLQQWLHDWPNSLKAGFKKPGKNGMNVFR 386
Query: 181 -LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
++ITG G+GKT + +HL A+L + TP K +E ++ +
Sbjct: 387 AILITGPPGIGKTTS-----AHLVAKLEGY---TPIELNASDARSKKLVESSTNI--MNQ 436
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAV 298
++ G + + + + L++D++ +G +A +R L L+R T IP
Sbjct: 437 SLDGWMGGGDATNAAGIKITEKSCLIMDEV---DGMSAGDRGGIGALNALIRKTRIPIIC 493
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+ D TAQ + LQ ++ +I+ + I +E+ +
Sbjct: 494 IAN--------DRTAQKMKPLQGSTFSLTFKRPEA-----ATIRSRIMSIAFREKLKVPA 540
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+D + ++ DIRQ + L L D M
Sbjct: 541 NVVDQLINSAQSDIRQVLNMLSTWKLSSDSM 571
>gi|124801451|ref|XP_001349697.1| replication factor C subunit 1, putative [Plasmodium falciparum
3D7]
gi|3845304|gb|AAC71968.1| replication factor C subunit 1, putative [Plasmodium falciparum
3D7]
Length = 904
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 50/264 (18%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------------EERLGDSKDKFSTNV 180
QLW EKY+P++L EL + V +++ W ++ + +
Sbjct: 350 NQLWVEKYRPKNLNELVGNNQNVIKLQNWLASWEDVCIKGIKKPAQKTFRGIFENVNARC 409
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
+++G AG+GKT T + ++ G + E++ K +E S++
Sbjct: 410 ALLSGPAGIGKTTTAKIVSEASGYNVIEFNASD--------ERNKAAVEKISEM------ 455
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER-LRQCLLLLVRSTHIPTAVV 299
G + S+ + +++D++ +G ++ ++ +L L+ T P +
Sbjct: 456 ----ATGGYSIMSLNNRKLTKTCIIMDEV---DGMSSGDKGGSTAILKLIEKTKCPIICI 508
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
C D L + D K ++ P N +KR L +IC++E +
Sbjct: 509 ---CN-----DRQNNKMRTLANKCYDL---KFSM-PQKNSVVKRLL-EICKKEGIMMEPN 555
Query: 360 QIDLVAQASGGDIRQAITSLQFSS 383
++L+ +++ GDIRQ + +LQ S
Sbjct: 556 ALELLWESTCGDIRQMLNTLQLLS 579
>gi|432328446|ref|YP_007246590.1| AAA ATPase [Aciduliprofundum sp. MAR08-339]
gi|432135155|gb|AGB04424.1| AAA ATPase [Aciduliprofundum sp. MAR08-339]
Length = 434
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 28/244 (11%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR ++ K + E+ W ++ + K LV+ G+ G GKT + +
Sbjct: 5 WVEKYRPRRFRDIVGNNKAINEILRWAQDW---ERGKPRYKALVLVGKPGCGKTTVAKVL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A +G + E + Q+ G Y + D+ E I +
Sbjct: 62 AEEMGWGVIELNASDIRNEQKIKEIALRGAVYETFTDDGE--------------FISSKK 107
Query: 259 KSSAILLIDDLP-VTNGRTAFER-LRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+++ D+ + G +R ++ + +++T P ++ + S + ++
Sbjct: 108 GGRKLIIFDEADNLYEGVKDGDRGGKKAIAETIKNTRQPIILIGNDYYSLFS-GTWGKAL 166
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+ L + + +T I + L +IC E + +A SGGD+R AI
Sbjct: 167 KSLAYV--------IRFKALTRAQIMKVLKRICMAEGIKCQDTALAYIAGRSGGDLRAAI 218
Query: 377 TSLQ 380
LQ
Sbjct: 219 NDLQ 222
>gi|390938547|ref|YP_006402285.1| AAA ATPase [Desulfurococcus fermentans DSM 16532]
gi|390191654|gb|AFL66710.1| AAA ATPase central domain protein [Desulfurococcus fermentans DSM
16532]
Length = 426
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 63/318 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P++L+E+ Q + ++ W K K S ++ G G GKT+ V +
Sbjct: 8 WIIKYRPKTLDEVVNQDEAKSKLLEWLSSW---EKGKPSKKAALLHGPPGCGKTSLVEAL 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A G +L LE + + +ERI + S S ++ G
Sbjct: 65 ARSKGYQL---------------------LEMNASDARRKEDIERIVKLASRSGALTGSR 103
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+L+D++ + R + + L+ +++ + P +++T + + +Q
Sbjct: 104 K---IILLDEVDGMDVRADTGGV-EALVEVIKVSANP--IIMT------ANNPYSQMLRP 151
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+ + + +A +T + L +IC E+ + +D +A+ S GD+R AI
Sbjct: 152 LREL-----SEMIAFKRLTPRDVITVLKRICSAEKLVCEDQALDEIAKRSEGDLRSAIND 206
Query: 379 LQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNK--- 435
L+ + + ++L + K S RD T + + AL K +++
Sbjct: 207 LEAMAGASE---RITLGLVK--------------SFSTYRDRTYAPYEALQKLFNSRYIF 249
Query: 436 --RETDNLVKMDQDAFVV 451
RE + D F+V
Sbjct: 250 QAREAPTSTDLTPDEFMV 267
>gi|146423370|ref|XP_001487614.1| hypothetical protein PGUG_00991 [Meyerozyma guilliermondii ATCC
6260]
Length = 708
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 106/268 (39%), Gaps = 43/268 (16%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLV 182
++S+ LW KY P+ +L + ++ ++++W ++K F +
Sbjct: 148 TTSSADLWTVKYAPKDTSQLCGNKGQINKLQSWLASWFDNAKSGFKNPGSDGSGVFRACL 207
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE 242
I+G G+GKT+ +A +LG + E + N K+ L TS + F++ +
Sbjct: 208 ISGPPGIGKTSAAHLVAHNLGYDVLEKNASDVRSKSLLNSNLKSVLSNTSVVGFFKHQHD 267
Query: 243 RI----RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAV 298
+ RR+ + G S D +AF R+ L+L+
Sbjct: 268 QASVNDRRFCIIMDEVDGMSSG-------DHGGAGALSAFCRITSMPLILI--------- 311
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
C D + ++F+ + +D R+ T ++ L I +E+ L
Sbjct: 312 ----CN--DKLLPKMRTFDR---VTLDLPFRRP-----TENEVRSRLMTIALREKIKLDP 357
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQ 386
I + QA+G DIRQ IT L S Q
Sbjct: 358 TVIGQLVQATGNDIRQMITMLATVSRTQ 385
>gi|366996252|ref|XP_003677889.1| hypothetical protein NCAS_0H02320 [Naumovozyma castellii CBS 4309]
gi|342303759|emb|CCC71542.1| hypothetical protein NCAS_0H02320 [Naumovozyma castellii CBS 4309]
Length = 790
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 106/284 (37%), Gaps = 76/284 (26%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSK-----------------DKFSTNV- 180
W +KP+S++E+ ++ K +V W E K D+F+ +
Sbjct: 276 WPNLFKPKSIKEVMLEPKLKTQVEIWLNESFDKLKKPTTRNKLQKKLAKEEVDEFANFII 335
Query: 181 ---------------------LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE 219
L I G+GK + I LG +++E +T
Sbjct: 336 HGDADVDDSDNDETQTIDFVPLAILYGEGIGKNTLIELIMEDLGGQIFEVNT-------- 387
Query: 220 YMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVT--NGRTA 277
++ + KL+EF ST+ + G S I+L DD+ V
Sbjct: 388 --SENRSKKDILDKLNEF-----------STTHYVKGRG-SKGIILFDDVDVIFKEHDKF 433
Query: 278 FERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPIT 337
F + LLL R P ++ C + + +T + E ++ L A +
Sbjct: 434 FWNAVEKLLLTARR---PIILI---CRDLNFIPTTLINVAEEENSLFSAKV-------VA 480
Query: 338 NGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
++K L K C+ L +E ID + QA+ DIR+ + SLQF
Sbjct: 481 TKTVKAFLLKYCQILNLQLDSEIIDNIIQANNKDIRKCLMSLQF 524
>gi|119872171|ref|YP_930178.1| replication factor C large subunit [Pyrobaculum islandicum DSM
4184]
gi|150415668|sp|A1RSA3.1|RFCL_PYRIL RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|119673579|gb|ABL87835.1| replication factor C large subunit [Pyrobaculum islandicum DSM
4184]
Length = 423
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 98/259 (37%), Gaps = 57/259 (22%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAW----------FEERLGDSKDK--FSTNVLVITGQ 186
W EKY+P++ EE+ Q + + +W F R KDK +++ G
Sbjct: 5 WVEKYRPKTFEEIVNQEEAKYTLASWICAKFKAPREFCTRWAKKKDKEIVEAKAVLLAGP 64
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT V +A + L E + + +TG ERI++
Sbjct: 65 PGIGKTTIVHALAREIKYELIELNA----------SDVRTG--------------ERIKQ 100
Query: 247 Y---GSTSPSIPG-ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
G S+ G E K +D L V E + + ++ +P V++T
Sbjct: 101 VVGRGLREASLFGYEGKLVLFDEVDGLHVKEDLGGLETIVE----IIEIAKVP--VIMTA 154
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
D F L+ I A + L ++ + L +IC E E +
Sbjct: 155 NNPYDP------KFRPLRDI-----ALVINLKRLSEDDVVEVLRRICANEGAKCEEEALR 203
Query: 363 LVAQASGGDIRQAITSLQF 381
+A++S GD+R AI LQ
Sbjct: 204 SIAKSSLGDLRAAINDLQM 222
>gi|449550173|gb|EMD41138.1| hypothetical protein CERSUDRAFT_131701, partial [Ceriporiopsis
subvermispora B]
Length = 920
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 36/265 (13%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STNV---LVITG 185
+ QLW ++Y P++L+E+ + +VE+++ W + K F NV ++ITG
Sbjct: 341 SSQLWTDRYAPQTLKEICGNKGQVEKLQQWLHDWSASLKSGFKKPGKSGMNVFRAVLITG 400
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT + +HL A+L + TP K +E ++ + ++
Sbjct: 401 PPGIGKTTS-----AHLCAKLEGF---TPIELNASDARSKKLVESSTNI--MNASLDGWM 450
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
G+ + + + L++D++ +G +A +R L L++ T IP + + G
Sbjct: 451 VGGAATNAAGVAITDKSCLIMDEV---DGMSAGDRGGVGALTALIKKTKIPIICIANDRG 507
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
A + L ++ + RK N I + R LS I +E + ID +
Sbjct: 508 --------AMKLKPLANVTYNLTFRKPEANVIRS----RILS-IAFKENMKIPANVIDQL 554
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM 389
+ DIRQ + L L D M
Sbjct: 555 ITGAQSDIRQVLNMLSTWRLSSDTM 579
>gi|324500315|gb|ADY40152.1| Replication factor C subunit 2 [Ascaris suum]
Length = 364
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 46/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L+++ + ++ RLG + + +VI+G G GKT ++ +
Sbjct: 48 WLEKYRPQKLQDVVGNKLAIQ--------RLGMFAKQGNLPNIVISGPPGCGKTTSIWAL 99
Query: 199 ASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A L G ++ E LE + D + V +I+ + T S+P
Sbjct: 100 ARELLGTQIRE-----------------ACLELNASDDRGIDVVRNKIKSFAQTKVSLP- 141
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
E + I+L + +T G A + LR+ + + ++T + C ++D + QS
Sbjct: 142 EGRHKIIILDEADSMTEG--AQQALRRTMEIYSKTTRFALS-----CNQSDKIIEPIQSR 194
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+ + + + + I L ++C EQ ID + + GD+RQA+
Sbjct: 195 CAI-----------LRFSKLKDEEIATRLLQVCTYEQVVYDESGIDALIFTAQGDMRQAL 243
Query: 377 TSLQ 380
+LQ
Sbjct: 244 NNLQ 247
>gi|119481305|ref|XP_001260681.1| chromosome transmission fidelity factor [Neosartorya fischeri NRRL
181]
gi|119408835|gb|EAW18784.1| chromosome transmission fidelity factor [Neosartorya fischeri NRRL
181]
Length = 1064
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 44/287 (15%)
Query: 117 RFEGLVNPDHDSASASSST-------QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL 169
+ +G + P + S + S QLW KY P ++ + + VE+++ W
Sbjct: 448 KAKGTMTPKASAGSQAPSAFQGAKVDDQLWTTKYAPTAMNMICGNKGAVEKLQTWLHNWH 507
Query: 170 GDSKDKFST---------NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEY 220
++K FS ++I G G+GKT +A+ G + E + +
Sbjct: 508 KNAKFNFSRPGKDGSGVYRAVMIHGPPGIGKTTAAHLVANLEGYDVVETNASDTRSKKLV 567
Query: 221 MHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER 280
N L+ TS F ++I +K + +L++D++ +G +A +R
Sbjct: 568 ESNLLDILDTTSLQGYFSGEGKKIE-----------STKKNLVLIMDEV---DGMSAGDR 613
Query: 281 LR-QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNG 339
L+ L + THIP ++ E + +++ D ++ T
Sbjct: 614 GGVGALVSLAKKTHIPLILICNE-----------RRLPKMKPF--DHVTYELPFRRPTAE 660
Query: 340 SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
I+ LS IC +E + +D + + + DIRQ I L L Q
Sbjct: 661 QIRARLSTICFREGLKIPPPVLDSLIEGTNADIRQVINMLSTVKLDQ 707
>gi|68473223|ref|XP_719417.1| hypothetical protein CaO19.7658 [Candida albicans SC5314]
gi|46441233|gb|EAL00532.1| hypothetical protein CaO19.7658 [Candida albicans SC5314]
gi|238880430|gb|EEQ44068.1| activator 1 37 kDa subunit [Candida albicans WO-1]
Length = 323
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ LE++ + VE ++ ++ G+ + ++I+G G+GKT ++ +
Sbjct: 11 WVEKYRPKKLEDIVGNEETVERLKLIVQD--GNMPN------MIISGLPGIGKTTSIHCL 62
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK--LDEFENFVERIRRYGSTSPSIPG 256
A L + E+ H L + +D N +I+++ T S+P
Sbjct: 63 AYEL-------------LGDEHYHQATMELNASDDRGIDVVRN---KIKQFAQTKISLP- 105
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I+L + +T G A + LR+ + + +T A C ++ +
Sbjct: 106 PGRQKIIILDEADSMTPG--AQQALRRTIEIYSNTTRFAFA-----CNQSSKI------I 152
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E LQS + N +++ + L +I + E +TE + + + GD+RQAI
Sbjct: 153 EPLQS-----RCAILRYNRLSDEEVLARLLEIIKMEDVKYNTEGLQALIFTAEGDMRQAI 207
Query: 377 TSLQ 380
+LQ
Sbjct: 208 NNLQ 211
>gi|340505502|gb|EGR31822.1| hypothetical protein IMG5_101260 [Ichthyophthirius multifiliis]
Length = 183
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW--------FEERLGD--SKDKFSTNVL 181
S QQLW +KY P+ +EL K E W F L D S K +V+
Sbjct: 23 SKKNQQLWVDKYMPKRFDELLSNDKINREALCWLKSWDPILFFYDLNDEYSLQKMQNSVI 82
Query: 182 VITGQAGVGKTATVRQIASHLGARLYE 208
++ G G GKT R IA H G + E
Sbjct: 83 LLAGPPGSGKTTLARNIAKHCGYKTIE 109
>gi|320582361|gb|EFW96578.1| Replication factor C subunit [Ogataea parapolymorpha DL-1]
Length = 804
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 104 IQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRA 163
+++E G+F P R S T++LW KY P ++++ + VE +++
Sbjct: 234 LKQERAGQFSQPER-----------PSDKPDTEKLWTVKYAPTDIKQICGNKGNVELLQS 282
Query: 164 WFEERLGDSKDKF------STNVLVITGQAGVGKTATVRQIASHLGARLYE 208
W E ++K F ++I+G G+GKT +A LG + E
Sbjct: 283 WLEHWFDNAKTGFKGPGIHGYRAVMISGPPGIGKTTAAHIVAKSLGFDVIE 333
>gi|352683022|ref|YP_004893546.1| replication factor C, large subunit [Thermoproteus tenax Kra 1]
gi|350275821|emb|CCC82468.1| replication factor C, large subunit [Thermoproteus tenax Kra 1]
Length = 423
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 49/255 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAW----------FEERLGDSKDK--FSTNVLVITGQ 186
W EK++PRS +++ Q + + +W F + SKDK +++ G
Sbjct: 4 WVEKHRPRSFKDIVDQEQAKYALASWVCAKFKVSEHFCRQWARSKDKEILEARSILLAGP 63
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
GVGKT V +A+ + L E + + + ++++ E V R R
Sbjct: 64 PGVGKTTLVHALANEINYELIELNA--------------SDVRTSARIKE---VVGRGLR 106
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
GS S I+L D++ N + L ++ ++ + +P +++T
Sbjct: 107 EGSLF------GYSGRIVLFDEVDGLNPKEDLGGL-DSIVDMIETARVP--IIMTANNPY 157
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D Q L+ I + V L + + L +IC E+ + + +A+
Sbjct: 158 D------QRLRPLREI-----SYVVNLKKLDEEDVVEVLRRICSTEKIKCEEDALRALAR 206
Query: 367 ASGGDIRQAITSLQF 381
+S GD+R AI LQ
Sbjct: 207 SSNGDLRAAINDLQL 221
>gi|335436421|ref|ZP_08559216.1| replication factor C large subunit [Halorhabdus tiamatea SARL4B]
gi|334897733|gb|EGM35862.1| replication factor C large subunit [Halorhabdus tiamatea SARL4B]
Length = 498
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E ++P +L E+ K + ++ W + D ++ +++ G GVGKT+
Sbjct: 4 WTETHRPSTLTEVRGNDKARDALQEWAD-TWPDHRE-----AVILYGSPGVGKTS----- 52
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+H A +W PTI E + ++ +ER+ + S ++
Sbjct: 53 AAHALANDMDW----PTI------------ELNASDSRTKDVIERVAGEAAKSGTLTQGG 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E F E
Sbjct: 97 SGRRLVILDEADNLHGNVDRGGTR-AITSLVKEAQQPMVLIANE-------------FYE 142
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L +A R + ++ SI L ICRQE + + +A+ + GD+R AI
Sbjct: 143 MSNGLRNA-CRDIEFRDVSARSIVPVLRDICRQEDVGFEEDALRKIAEMNDGDLRGAIND 201
Query: 379 LQ 380
LQ
Sbjct: 202 LQ 203
>gi|350289217|gb|EGZ70442.1| DNA replication factor C, large subunit [Neurospora tetrasperma
FGSC 2509]
Length = 1090
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 108/277 (38%), Gaps = 57/277 (20%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVL 181
+ + QLW KY P ++ ++ + VE+++ W F++R D + +
Sbjct: 482 TPSSQLWTTKYAPTAMNQICGNKANVEKIQNWLKNWPKSRKYNFQKRGADGSGGY--RAI 539
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+I+G G+GKT A+HL A++ +D ++ T EN V
Sbjct: 540 IISGPPGIGKT-----TAAHLAAKMEGYDV------------IESNASDTRSKKLIENGV 582
Query: 242 ERIRRYGSTSPSIPGESKSS------AILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHI 294
+ S G+ K + +L++D++ +G +A +R + + T +
Sbjct: 583 SEVMTNTSLLGFFGGDGKHADARKKKIVLVMDEV---DGMSAGDRGGVGTMAKFCKKTEV 639
Query: 295 PTAVVLTE--CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
P ++ E K D A + Q VD I+ + IC +E
Sbjct: 640 PLILICNERRLPKMKPFDHVAFDI-KFQRPTVD--------------QIRSRIMTICHRE 684
Query: 353 QYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+ ++ + + SG DIRQ I + + L Q M
Sbjct: 685 GLKIPPPVVNALIEGSGRDIRQIINMIFTAKLDQTTM 721
>gi|19113399|ref|NP_596607.1| DNA replication factor C complex subunit Rfc1 [Schizosaccharomyces
pombe 972h-]
gi|30913227|sp|O60182.1|RFC1_SCHPO RecName: Full=Replication factor C subunit 1; Short=Replication
factor C1
gi|3116125|emb|CAA18875.1| DNA replication factor C complex subunit Rfc1 [Schizosaccharomyces
pombe]
Length = 934
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 37/263 (14%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST-------- 178
DS S Q+W KY P SL+++ + V++++ W ++ + K F+
Sbjct: 349 DSNKKESQPSQIWTSKYAPTSLKDICGNKGVVQKLQKWLQDYHKNRKSNFNKPGPDGLGL 408
Query: 179 -NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
++++G G+GKT A+HL A+L +D + + + ++ +L
Sbjct: 409 YKAVLLSGPPGIGKTT-----AAHLVAKLEGYD-----VLELNASDTRSKRLLDEQLFGV 458
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL-LLVRSTHIPT 296
+ +G+ + + +KS +L++D++ +G ++ +R L ++++ + IP
Sbjct: 459 TDSQSLAGYFGTKANPV-DMAKSRLVLIMDEI---DGMSSGDRGGVGQLNMIIKKSMIP- 513
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ C D L D R+ N S++ + I +E L
Sbjct: 514 --IICICN-----DRAHPKLRPLDRTTFDLRFRRPDAN-----SMRSRIMSIAYREGLKL 561
Query: 357 STEQIDLVAQASGGDIRQAITSL 379
S + +D + Q + D+RQ I L
Sbjct: 562 SPQAVDQLVQGTQSDMRQIINLL 584
>gi|448652146|ref|ZP_21681159.1| replication factor C large subunit [Haloarcula californiae ATCC
33799]
gi|445769549|gb|EMA20623.1| replication factor C large subunit [Haloarcula californiae ATCC
33799]
Length = 508
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W E D ++ +++ G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKKWAE-TWDDHRE-----AVILYGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W PTI E + ++ + R+ + S ++
Sbjct: 57 ANDMG-----W----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE ++ + +A+ + GD+R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQELAEQNSGDLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|240275879|gb|EER39392.1| chromosome transmission fidelity factor [Ajellomyces capsulatus
H143]
Length = 1071
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE----RLGDSKD--KFSTNV---LVITGQA 187
+LW KY P SL + + VE+++ W + D K K T + ++I G
Sbjct: 473 RLWTSKYAPTSLSMICGNKGAVEKLQTWLRNWRTSSMADFKKGGKDGTGIYRAVMIHGPP 532
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 533 GIGKT-----TAAHLVAKLENYDVVESNASDTRSKSLVETGLRGVLDTTSLQGY--FSGE 585
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
++ S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 586 GKKVES--------GKKNLVLIMDEV---DGMSAGDRGGVGALAAVAKKTRIPMILICNE 634
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ + I+ LS IC +E + + +D
Sbjct: 635 --------RRLPKMRPFDSVTFDLPFRRPTVE-----QIRARLSTICYREGLKIPPQVLD 681
Query: 363 LVAQASGGDIRQAITSLQFSSLKQDPMLN 391
+ Q + DIRQ I L + L Q P L+
Sbjct: 682 NLIQGTHADIRQVINMLSTAKLDQ-PTLD 709
>gi|354545670|emb|CCE42397.1| hypothetical protein CPAR2_200400 [Candida parapsilosis]
Length = 873
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 27/107 (25%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG--------------------- 170
+ S +QLW +K++P+S ++L + R+ +E + W ++ G
Sbjct: 411 NDSGKQLWVDKFRPKSTQDLLMHRQNIELITNWIKDSFGKIQTQAPVKNLNRKLKKRRLD 470
Query: 171 ------DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDT 211
D++++FS+ L+I G +G GK+ V L ++E ++
Sbjct: 471 SFIVYEDTEEEFSSPFLIIQGSSGSGKSTAVYTAMKELDGYVHEINS 517
>gi|11999114|gb|AAG43050.1|AF139827_1 replication factor C subunit 1 [Plasmodium falciparum]
Length = 904
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 50/264 (18%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------------EERLGDSKDKFSTNV 180
QLW EKY+P++L EL + V +++ W ++ + +
Sbjct: 350 NQLWVEKYRPKNLNELVGNNQNVIKLQNWLASWEDVCIKGIKKPAQKTFRGIFENVNARC 409
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
+++G AG+GKT T + ++ G + E++ K +E S++
Sbjct: 410 ALLSGPAGIGKTTTAKIVSEASGYNVIEFNASD--------ERNKAAVEKISEM------ 455
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER-LRQCLLLLVRSTHIPTAVV 299
G + S+ + +++D++ +G ++ ++ +L L+ T P +
Sbjct: 456 ----ATGGYSIMSLNNRKLTKTCIIMDEV---DGMSSGDKGGSTAILKLIEKTKCPIICI 508
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
C D L + D K ++ P N +KR L +IC++E +
Sbjct: 509 ---CN-----DRQNNKMRTLANKCYDL---KFSM-PQKNSVVKRLL-EICKKEGIMMEPN 555
Query: 360 QIDLVAQASGGDIRQAITSLQFSS 383
++L+ +++ GDIRQ + +LQ S
Sbjct: 556 ALELLWESTCGDIRQMLNTLQLLS 579
>gi|402899264|ref|XP_003912623.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Papio
anubis]
Length = 1834
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1040 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1099
Query: 170 ------------GDSKDKFS--TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ S N ++ITG GVGKTA V A LG +++E
Sbjct: 1100 KQEDFLGGIDFKGSSDDEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1152
>gi|110668631|ref|YP_658442.1| replication factor C large subunit [Haloquadratum walsbyi DSM
16790]
gi|121687203|sp|Q18GQ9.1|RFCL_HALWD RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|109626378|emb|CAJ52837.1| replication factor C large subunit [Haloquadratum walsbyi DSM
16790]
Length = 516
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E+Y+P +L + +E W E S D +V V+ G GVGKT+ +
Sbjct: 4 WTERYRPTTLSAVRGNNAARDEFIEWAE-----SWDDHHESV-VLHGAPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS +G W+ N + TS D E R + + + ++ G +
Sbjct: 58 ASDMG-------------WETVELNASD--QRTS--DVIERLAGRAAKNATLAGAVSGTT 100
Query: 259 KSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++++D+ N ++R +Q + L++ + P ++ E +
Sbjct: 101 STRQLIIMDE--ADNIHYQYDRGGKQAVTTLLKDANQPIVLIANE-------------YY 145
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++ L +A A+ + I+ SI L I R+E + +A+ + GD+R AI
Sbjct: 146 DMSRGLRNA-AQDIEFRDISARSIVPVLRNILRKENIEFEEAALKQIAEVNSGDLRAAIK 204
Query: 378 SLQ 380
LQ
Sbjct: 205 DLQ 207
>gi|375082750|ref|ZP_09729797.1| replication factor C large subunit [Thermococcus litoralis DSM
5473]
gi|374742598|gb|EHR78989.1| replication factor C large subunit [Thermococcus litoralis DSM
5473]
Length = 486
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q K +E+V+AW E + K L++ G G GKT TV +
Sbjct: 4 WVEKYRPRRLVEIVNQEKALEKVKAWIESWFHGTPKK---KALLLAGPPGSGKTTTVYAL 60
Query: 199 ASH 201
A+
Sbjct: 61 ANE 63
>gi|169865629|ref|XP_001839413.1| purine nucleotide binding protein [Coprinopsis cinerea
okayama7#130]
gi|116499532|gb|EAU82427.1| purine nucleotide binding protein [Coprinopsis cinerea
okayama7#130]
Length = 920
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 41/257 (15%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITG 185
+ QLW +Y P++L+E+ + +VE+++ W + K F ++ITG
Sbjct: 351 STQLWTTRYAPQNLKEICGNKGQVEKLQQWLNDWQSSMKAGFKKPGKNGMNIYRAVLITG 410
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--FENFVER 243
G+GKT + +HL A+L + TP K +E ++ + F++
Sbjct: 411 SPGIGKTTS-----AHLCAKLAGY---TPIELNASDARSKKLVENGMNINNTSLDGFIK- 461
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
G++ S+ + L++D++ +G +A +R L L++ T +P +
Sbjct: 462 ----GASKNSVGVDITDRTCLIMDEV---DGMSAGDRGGVGALNALIKKTKVPIICIAN- 513
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
D AQ + LQ K +N I+ + I +E+ + ID
Sbjct: 514 -------DRNAQKLKPLQGTTFSLPFHKPQVN-----MIRSRILTIAFKEKLKIPPNVID 561
Query: 363 LVAQASGGDIRQAITSL 379
+ + DIRQ + L
Sbjct: 562 QLIAGAQSDIRQVLNML 578
>gi|325093242|gb|EGC46552.1| chromosome transmission fidelity protein [Ajellomyces capsulatus
H88]
Length = 1071
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE----RLGDSKD--KFSTNV---LVITGQA 187
+LW KY P SL + + VE+++ W + D K K T + ++I G
Sbjct: 473 RLWTSKYAPTSLSMICGNKGAVEKLQTWLRNWRTSSMADFKKGGKDGTGIYRAVMIHGPP 532
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 533 GIGKT-----TAAHLVAKLENYDVVESNASDTRSKSLVETGLRGVLDTTSLQGY--FSGE 585
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
++ S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 586 GKKVES--------GKKNLVLIMDEV---DGMSAGDRGGVGALAAVAKKTRIPMILICNE 634
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ + I+ LS IC +E + + +D
Sbjct: 635 --------RRLPKMRPFDSVTFDLPFRRPTVE-----QIRARLSTICYREGLKIPPQVLD 681
Query: 363 LVAQASGGDIRQAITSLQFSSLKQDPMLN 391
+ Q + DIRQ I L + L Q P L+
Sbjct: 682 NLIQGTHADIRQVINMLSTAKLDQ-PTLD 709
>gi|225563290|gb|EEH11569.1| chromosome transmission fidelity factor [Ajellomyces capsulatus
G186AR]
Length = 1071
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE----RLGDSKD--KFSTNV---LVITGQA 187
+LW KY P SL + + VE+++ W + D K K T + ++I G
Sbjct: 473 RLWTSKYAPTSLSMICGNKGAVEKLQTWLRNWRTSSMADFKKGGKDGTGIYRAVMIHGPP 532
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 533 GIGKT-----TAAHLVAKLENYDVVESNASDTRSKSLVETGLRGVLDTTSLQGY--FSGE 585
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
++ S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 586 GKKVES--------GKKNLVLIMDEV---DGMSAGDRGGVGALAAVAKKTRIPMILICNE 634
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ + I+ LS IC +E + + +D
Sbjct: 635 --------RRLPKMRPFDSVTFDLPFRRPTVE-----QIRARLSTICYREGLKIPPQVLD 681
Query: 363 LVAQASGGDIRQAITSLQFSSLKQDPMLN 391
+ Q + DIRQ I L + L Q P L+
Sbjct: 682 SLIQGTHADIRQVINMLSTAKLDQ-PTLD 709
>gi|392592440|gb|EIW81766.1| DNA replication factor C, large subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 999
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 44/266 (16%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST--------- 178
SA A + LW KY P++L+E+ + +VE+++ W ++ K F
Sbjct: 396 SAKAIDMSSALWTTKYAPQNLKEICGNKGQVEKLQQWLKDWKSSYKSGFKKPGKNGMNIF 455
Query: 179 NVLVITGQAGVGKTATVRQIASHLGARLYEWDTP----TPTIWQEYMHNCKTGLEYTSKL 234
++ITG G+GKT + +H+ ARL E TP + + M + TS L
Sbjct: 456 RAVLITGPPGIGKTTS-----AHMCARL-EGFTPIEMNASDVRSKRMVESGLNINNTS-L 508
Query: 235 DEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTH 293
D + E G + L++D++ +G +A +R L L++ +
Sbjct: 509 DGWMGGPEATNASGVA-------ITDRSCLIMDEV---DGMSAGDRGGVGALNALIKKSR 558
Query: 294 IPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ 353
IP + + G AQ + L + + RK +I+ + I +E+
Sbjct: 559 IPIICIANDRG--------AQKLKPLIATTFNLPFRKPDAT-----AIRSRMMSIAYKEK 605
Query: 354 YSLSTEQIDLVAQASGGDIRQAITSL 379
+ +D + Q S DIRQ + L
Sbjct: 606 MQIPPNVVDALVQGSQSDIRQVLNML 631
>gi|304320347|ref|YP_003853990.1| DNA polymerase III subunits gamma and tau [Parvularcula bermudensis
HTCC2503]
gi|303299249|gb|ADM08848.1| DNA polymerase III subunits gamma and tau [Parvularcula bermudensis
HTCC2503]
Length = 607
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 39/264 (14%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
D S +S ++ A KY+P+S ++L V +R F + D+ + + ++T
Sbjct: 3 DDLSPPPTSPGYRVLARKYRPQSFDDLLGHEAMVRTLRNAF------AADRIA-HAFILT 55
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE------ 238
G GVGKT T R IA L D PT + E H C+ + + D +E
Sbjct: 56 GVRGVGKTTTARIIARALNYETETIDRPTVDMPVEGRH-CR-AIAESRHPDVYEMDAASR 113
Query: 239 NFVERIRRY--GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
V IR G I G K + +ID++ + + AF L + L H+
Sbjct: 114 TGVGDIRELIEGVRYAPIEGRYK---VYIIDEVHMLS-TNAFNALLKT--LEEPPAHVKF 167
Query: 297 AVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
TE K +V S Q F+ L S+ L+ I +E+ +
Sbjct: 168 IFATTEIRKVPVTVLSRCQRFD---------------LRRFDITSLSAHLAGIAEKEEAA 212
Query: 356 LSTEQIDLVAQASGGDIRQAITSL 379
+S E +D++AQA+ G +R A++ L
Sbjct: 213 ISKEALDMIAQAAEGSVRDALSLL 236
>gi|262401171|gb|ACY66488.1| replication factor C 2 (40kD) isoform 2 [Scylla paramamosain]
Length = 332
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 112/257 (43%), Gaps = 44/257 (17%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVIT 184
+ D AS S ++ W EKY+P + ++ + V + + ++ G+ + ++I
Sbjct: 18 NKDKASPSETSHAPWIEKYRPTTFPDIVGNEETVARLEVFAKQ--GNVPN------IIIA 69
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-R 243
G GVGKT T+ +A L P+ + M E + D + V +
Sbjct: 70 GPLGVGKTTTILCLARALLG---------PSFREAVM-------ELNASNDRGIDVVRNK 113
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC 303
I+ + ++P + K I+L + +T+G A + LR+ + + +T
Sbjct: 114 IKMFAQQKVTLP-KGKHKIIILDEADSMTDG--AQQALRRTMEIYSNTTRF--------- 161
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
A + +S+ + E +QS + + +T+ I L +C +E S + + ++
Sbjct: 162 --ALACNSSEKIIEPIQS-----RCAMLRYSKLTDAQILNKLQHVCSKEDLSYTDDGLEA 214
Query: 364 VAQASGGDIRQAITSLQ 380
+ + GD+RQA+ +LQ
Sbjct: 215 ILFTAQGDMRQALNNLQ 231
>gi|261195366|ref|XP_002624087.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
SLH14081]
gi|239587959|gb|EEQ70602.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
SLH14081]
Length = 1065
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 45/264 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW +Y P SL + + VE++++W + F ++I G
Sbjct: 469 RLWTSRYAPTSLSMICGNKGAVEKLQSWLRNWRNSAMADFKKGGKDGTGLYRAVMIHGPP 528
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 529 GIGKT-----TAAHLVAKLENYDVVESNASDTRSKSLVETGLQGVLDTTSLQGY--FSGE 581
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
+R S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 582 GKRVES--------GKKNLVLIMDEV---DGMSAGDRGGVGALAAVAKKTRIPMILICNE 630
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ + I+ LS IC +E ++ + +D
Sbjct: 631 --------RRLPKMRPFDSVTFDLQFRRPTVE-----QIRARLSTICYREGLKITPQVLD 677
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ 386
+ Q + DIRQ I L + L Q
Sbjct: 678 NLIQGTHADIRQVINMLSTAKLDQ 701
>gi|383421711|gb|AFH34069.1| ATPase family AAA domain-containing protein 5 [Macaca mulatta]
Length = 1834
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1040 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1099
Query: 170 ------------GDSKDKFS--TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ S N ++ITG GVGKTA V A LG +++E
Sbjct: 1100 KQEDFSGGIDFKGSSDDEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1152
>gi|345842218|dbj|BAK78873.1| enhanced level of genomic instability gene 1 [Gallus gallus]
Length = 1816
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 34/116 (29%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE------------RLGDSKD 174
D+ + S LW EKY+P+ EL +K++E + +W +E + G+ +D
Sbjct: 1026 DTNALSGVEDVLWTEKYQPQDSSELVGNKKEIERLHSWLKEWKKRADWEEKRNQKGEKED 1085
Query: 175 KFS----------------------TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
K N ++ITG GVGKTA V A LG +++E
Sbjct: 1086 KEHQDSLDSLDFKDDKSDIEEENNLCNTVLITGPPGVGKTAAVYACAQELGFKIFE 1141
>gi|193605856|ref|XP_001945771.1| PREDICTED: replication factor C subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328696454|ref|XP_003240029.1| PREDICTED: replication factor C subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 363
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 60/251 (23%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST--NV--LVITGQAGVGKTAT 194
W EKY+P+S ++ + V + +KFS+ NV ++I G GVGKT T
Sbjct: 48 WIEKYRPKSFTDIVGNEETVLRL------------EKFSSCGNVPNIIIAGPPGVGKTTT 95
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK----LDEFENFVERIRRYGST 250
+ +A L ++ + LE + +D N ++ + T
Sbjct: 96 ILALARILLGGAFK----------------EAVLELNASSDRGIDTVRNKIKMFAQQKVT 139
Query: 251 SPSIPGESKSSAILLIDDL-PVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSV 309
P PG K I+++D+ +T+G A + LR+ + L +T A C +D +
Sbjct: 140 LP--PGRHK---IIILDEADSMTDG--AQQALRRTMELWSNTTRFALA-----CNNSDKI 187
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
QS + ++ G +++ + + K+C+ E+ S S + ++ V +
Sbjct: 188 IEAIQS----RCAMLRYGK-------LSDQEVMTQMLKVCKSEEVSFSADGLEAVVFTAQ 236
Query: 370 GDIRQAITSLQ 380
GD+RQA+ +LQ
Sbjct: 237 GDMRQALNNLQ 247
>gi|448685123|ref|ZP_21693133.1| replication factor C large subunit [Haloarcula japonica DSM 6131]
gi|445782326|gb|EMA33173.1| replication factor C large subunit [Haloarcula japonica DSM 6131]
Length = 508
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W E D ++ +++ G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKKWAE-TWDDHRE-----AVILYGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W PTI E + ++ + R+ + S ++
Sbjct: 57 ANDMG-----W----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE ++ + +A+ + GD+R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQELAEQNSGDLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|448681247|ref|ZP_21691380.1| replication factor C large subunit [Haloarcula argentinensis DSM
12282]
gi|445767780|gb|EMA18873.1| replication factor C large subunit [Haloarcula argentinensis DSM
12282]
Length = 508
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W D+ D +++ G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKEW-----ADTWDDHR-EAVILYGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ +G W PTI E + ++ + R+ + S ++
Sbjct: 57 ANDMG-----W----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE ++ + +A+ + GD+R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQELAEQNSGDLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|398303837|ref|NP_001257654.1| ATPase family AAA domain-containing protein 5 [Gallus gallus]
Length = 1816
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 34/116 (29%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE------------RLGDSKD 174
D+ + S LW EKY+P+ EL +K++E + +W +E + G+ +D
Sbjct: 1026 DTNALSGVEDVLWTEKYQPQDSSELVGNKKEIERLHSWLKEWKKRADWEEKRNQKGEKED 1085
Query: 175 KFS----------------------TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
K N ++ITG GVGKTA V A LG +++E
Sbjct: 1086 KEHQDSLDSLDFKDDKSDIEEENNLCNTVLITGPPGVGKTAAVYACAQELGFKIFE 1141
>gi|126178781|ref|YP_001046746.1| replication factor C large subunit [Methanoculleus marisnigri JR1]
gi|150415664|sp|A3CTR4.1|RFCL_METMJ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|125861575|gb|ABN56764.1| replication factor C large subunit [Methanoculleus marisnigri JR1]
Length = 454
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%), Gaps = 64/306 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L+++ V + W + S+ K L++ G+ G GKT++ +
Sbjct: 3 WVEKYRPQHLQDVVGNSGAVRLIYEWARDW---SRQK---KPLILYGKPGTGKTSSAYAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + W+ +E + + +ER+ GST+ S+ G S
Sbjct: 57 ANDM-----NWEV----------------VELNASDQRTKAALERVAGAGSTTASLSGAS 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++L+D+ +G+ A + ++ ++ + P ++ A +
Sbjct: 96 RK--LILLDEADNLHGQ-ADRGGAKAIVEIIAAAQQPIILI-------------ANDYYS 139
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L L A V + SI L +IC E + +D +A +GGD+R A+
Sbjct: 140 LTREL-KAVTEPVQFRALQARSIVPRLRQICAAEGVACDPAALDDIANRAGGDMRAAVNM 198
Query: 379 LQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRET 438
L +++ ++ + + S +DE ++F +G KR+
Sbjct: 199 LYAAAIGKEHLAAGDVHTS-------------------AKDERSTIFELVGATFKGKRDA 239
Query: 439 DNLVKM 444
D L++M
Sbjct: 240 D-LLRM 244
>gi|435850632|ref|YP_007312218.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433661262|gb|AGB48688.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 333
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 47/251 (18%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
+++W EKY+P L+++ Q + + ++++ + R + L+ +G GVGKTAT
Sbjct: 18 EEIWIEKYRPMRLDDIVGQTEAIARLKSYVKSR--------NLPHLLFSGPPGVGKTATA 69
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
IA L A D+ W+E E +D +I+ + TSP
Sbjct: 70 VSIAKELFA-----DS-----WRENFTELNASDE--RGIDVVRT---KIKSFAKTSPIGG 114
Query: 256 GESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
+ K I+ +D D ++ + A R + R T+ C S + ++
Sbjct: 115 ADFK---IIFLDEADALTSDAQAALRRTME------RYTN--------NCRFILSCNYSS 157
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
+ E +QS P+++ ++ + + E ++T+ ++ + + GD+R
Sbjct: 158 KIIEPIQS-----RCAVYRFRPLSDDAVTERVRFVASNEGIEVATDGMEAIKYVAQGDMR 212
Query: 374 QAITSLQFSSL 384
+AI +LQ +SL
Sbjct: 213 KAINALQAASL 223
>gi|409082644|gb|EKM83002.1| hypothetical protein AGABI1DRAFT_69120 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 372
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 35/246 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTAT 194
Q W EKY+P+++E+++ Q V +R K STN+ ++ G G GKT+T
Sbjct: 25 QPWVEKYRPKTIEDVSAQEHTVAVLR----------KTLTSTNLPHMLFYGPPGTGKTST 74
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+ +A L + D + + + + K+ F R + S +
Sbjct: 75 ILALARQL----FGPDNFKNRVLELNASDERGISIVREKIKNFARQTPRAQAVASDGKTY 130
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
P IL D + + A R+ + + R + C +
Sbjct: 131 PCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLV--------CNYVTRI----- 177
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E L S K P+ + S L+ I ++EQ + T ID + S GD+R+
Sbjct: 178 -IEPLAS-----RCSKFRFTPLDSESATSRLTYIAKEEQIDVDTSVIDALITVSNGDLRR 231
Query: 375 AITSLQ 380
AIT LQ
Sbjct: 232 AITYLQ 237
>gi|302307023|ref|NP_983504.2| ACR102Wp [Ashbya gossypii ATCC 10895]
gi|299788800|gb|AAS51328.2| ACR102Wp [Ashbya gossypii ATCC 10895]
Length = 840
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 96/261 (36%), Gaps = 42/261 (16%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NV 180
+A + QLW KY P SL ++ + V ++ W E + ++ F T
Sbjct: 273 AAPRESDQLWTVKYAPTSLSQICGNKSSVGKLHKWLSEWDNNQRNGFKTPGRDGTGIYRA 332
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++ G G+GKT +A+ LG + E + + K L+ TS + F
Sbjct: 333 AMLYGPPGIGKTTAAHLVANELGYDVLEQNASDVRSKKLLNEGIKNALDNTSVIGYFNKK 392
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAV 298
R R ++++D++ +G R ++ Q R T P +
Sbjct: 393 EHRNSR--------------KFVIIMDEVDGMSGGDRGGVGQMAQ----FCRKTSSPLIL 434
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+ E T ++ D R+ S+K L I +E + L
Sbjct: 435 ICNE--------RTLPKMRPFDRVVCDIQFRRPDAQ-----SMKARLMTIAVREGFKLDP 481
Query: 359 EQIDLVAQASGGDIRQAITSL 379
+D + A+ GDIRQ I L
Sbjct: 482 TVVDQLVAATRGDIRQIINLL 502
>gi|213402719|ref|XP_002172132.1| replication factor C subunit 1 [Schizosaccharomyces japonicus
yFS275]
gi|212000179|gb|EEB05839.1| replication factor C subunit 1 [Schizosaccharomyces japonicus
yFS275]
Length = 930
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW +KY P SL+++ + V+++++W FS ++I+G
Sbjct: 347 RLWTDKYAPTSLKDICGNKGLVQKLQSWLHSWPNARAANFSRPGPDGLGLYRAVLISGPP 406
Query: 188 GVGKTATVRQIASHLGARLYEWDT----PTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A L ++D + T + + G+ + L +
Sbjct: 407 GIGKTT-----AAHLVAHLEDYDVLEFNASDTRSKRMLDEHLLGVTDSRSLAGY------ 455
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL-LLVRSTHIPTAVVLTE 302
++ G P +K +L++D++ +G +A +R L +++ T IP ++
Sbjct: 456 LQGPGGKRPD---ANKQRLVLIMDEV---DGMSAGDRGGVGQLNTIIKKTRIP---IICI 506
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D + L D R+ N S++ + I +EQ L+ +D
Sbjct: 507 CN-----DRASPKLRPLDRTTFDMRFRRPDAN-----SLRSRIMSIAYREQLKLAPAAVD 556
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ 386
+ Q + DIRQ I L L Q
Sbjct: 557 QLVQGTHSDIRQIINILSAWRLGQ 580
>gi|448413827|ref|ZP_21577134.1| replication factor C large subunit [Halosarcina pallida JCM 14848]
gi|445682883|gb|ELZ35294.1| replication factor C large subunit [Halosarcina pallida JCM 14848]
Length = 500
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + W + GD ++ +V+ G GVGKT+ +
Sbjct: 4 WTEKYRPSTLAEVRGNNKARDAFAEWGKT-WGDHRE-----AVVLHGAPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR----YGSTSPSI 254
A+ +G W+ N D E F R + G+ +
Sbjct: 58 AADMG-------------WETVELNASD----QRTADVIERFAGRAAKNATLAGAAAGDA 100
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQ-CLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
GE + ++++D+ +G ++R + LV+ ++ P ++ E
Sbjct: 101 NGEREGRQLVILDEADNIHGN--YDRGGAGAVTRLVKESNQPIVLIANE----------- 147
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
+ ++ + L +A AR++ ++ SI L I R+E + +D +A+ + GD+R
Sbjct: 148 --YYDMSNGLRNA-AREIEFRDVSARSIVPVLRDILRKEGIEFDDDALDRIAEVNSGDLR 204
Query: 374 QAITSLQFSS 383
A+ LQ ++
Sbjct: 205 SAVNDLQAAA 214
>gi|350634492|gb|EHA22854.1| hypothetical protein ASPNIDRAFT_52205 [Aspergillus niger ATCC 1015]
Length = 1035
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 47/265 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P S+ + + VE+++ W + ++K F+ ++I G
Sbjct: 447 RLWTTKYAPTSMNMICGNKGVVEKLQNWLRDWHKNAKAGFNKPGKDGSGMYRSVMIHGPP 506
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+HL A+L +D + T ++ + N G L+ TS F +
Sbjct: 507 GIGKT-----TAAHLVAKLEGYDVVETNASDTRSKKLVENGLLGVLDTTSLQGYFSGVGK 561
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ +K + +L++D++ +G +A +R L + + THIP ++
Sbjct: 562 KVE-----------SAKKNLVLIMDEV---DGMSAGDRGGVGALASIAKKTHIPLILICN 607
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D ++ T I+ LS IC +E + + +
Sbjct: 608 E-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLRIPPQVL 654
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQ 386
D + + + DIRQ I L L Q
Sbjct: 655 DSLIEGTNADIRQVINMLSTVKLDQ 679
>gi|327349015|gb|EGE77872.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
ATCC 18188]
Length = 1065
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 45/264 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW +Y P SL + + VE++++W + F ++I G
Sbjct: 469 RLWTSRYAPTSLSMICGNKGAVEKLQSWLRNWRNSAMADFKKGGKDGTGLYRAVMIHGPP 528
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 529 GIGKT-----TAAHLVAKLENYDVVESNASDTRSKSLVETGLQGVLDTTSLQGY--FSGE 581
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
+R S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 582 GKRVES--------GKKNLVLIMDEV---DGMSAGDRGGVGALAAVAKKTRIPMILICNE 630
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ + I+ LS IC +E ++ + +D
Sbjct: 631 --------RRLPKMRPFDSVTFDLQFRRPTVE-----QIRARLSTICYREGLKITPQVLD 677
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ 386
+ Q + DIRQ I L + L Q
Sbjct: 678 NLIQGTHADIRQVINMLSTAKLDQ 701
>gi|327311518|ref|YP_004338415.1| replication factor C large subunit [Thermoproteus uzoniensis
768-20]
gi|326947997|gb|AEA13103.1| replication factor C large subunit [Thermoproteus uzoniensis
768-20]
Length = 422
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 101/255 (39%), Gaps = 49/255 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL----------GDSKDK--FSTNVLVITGQ 186
W EKY+PR+ +E+ Q + + +W R +KDK +++ G
Sbjct: 4 WVEKYRPRTFKEVVDQEEAKYALASWVCARFRAPEQFCKAWAKNKDKKISEAKAVLLAGP 63
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT V +A+ + L E + + +T + V R R
Sbjct: 64 PGIGKTTLVHALANEINYELVELNA----------SDVRTA-------ERIREVVGRGLR 106
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
GS + ++L D++ N + L ++ L+ + +P +V+T
Sbjct: 107 EGSLF------GYAGRLILFDEVDGLNPKEDLGGL-NSIIDLIETARVP--IVMTANNPW 157
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D Q L+ + + R++A + + L +IC E+ + + +A+
Sbjct: 158 D------QRLRPLRDVSLVVSLRRLAEDDVVE-----VLRRICDSEKIKCEEDALRALAR 206
Query: 367 ASGGDIRQAITSLQF 381
+S GD+R AI LQ
Sbjct: 207 SSDGDLRAAINDLQL 221
>gi|297272307|ref|XP_002800432.1| PREDICTED: ATPase family AAA domain-containing protein 5-like [Macaca
mulatta]
Length = 1635
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 999 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1058
Query: 170 ------------GDSKDKFS--TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ S N ++ITG GVGKTA V A LG +++E
Sbjct: 1059 KQEDFSGGIDFKGSSDDEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1111
>gi|407917716|gb|EKG11020.1| BRCT domain-containing protein [Macrophomina phaseolina MS6]
Length = 1072
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 44/281 (15%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE---------RLGDSKDKFSTNVLV 182
S +LW KY P L ++ + +VE+++ W +LG ++
Sbjct: 485 SGPDSRLWTVKYAPTQLAQICGNKGQVEKLQRWLRNFPKSQRKGFKLGGVDGSGLFRAVM 544
Query: 183 ITGQAGVGKTATVRQIASHLGARLYE---WDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
I G G+GKT +A G + E DT + + QE + LE TS L F
Sbjct: 545 IHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVQEGLQGV---LETTSLLGYFAG 601
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV-RSTHIPTAV 298
+++ ES+ +L++D++ +G +A +R L V + + IP +
Sbjct: 602 DGKKVE-----------ESRKKLVLIMDEV---DGMSAGDRGGVGALAAVCKKSQIPMIL 647
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+ C D + + D R+ P T+ I+ + I +E +
Sbjct: 648 I---CN-----DRRLPKMKPFDYVTYDLPFRR----PTTD-QIRSRIMTIAYREGLKMPK 694
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPM-LNLSLSISK 398
+D + + + DIRQ + + + L ++ M + S S+SK
Sbjct: 695 NVVDALIEGTNADIRQVVNMVSTAKLDEEAMDFDRSKSMSK 735
>gi|14520329|ref|NP_125804.1| replication factor C large subunit [Pyrococcus abyssi GE5]
gi|42559542|sp|Q9V2G3.3|RFCL_PYRAB RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=PabRFC large subunit
gi|5457544|emb|CAB49035.1| rfcL activator 1, replication factor C, large subunit [Pyrococcus
abyssi GE5]
gi|380740853|tpe|CCE69487.1| TPA: replication factor C large subunit [Pyrococcus abyssi GE5]
Length = 479
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 45/242 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L E+ Q + +V+AW E L + K L++ G G GKT TV +
Sbjct: 6 WVEKYRPRRLSEIINQEDAISKVKAWIEAWLHGNPPK--KKALLLAGPPGSGKTTTVYAL 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A + E + E ++I RY + ++
Sbjct: 64 AREYNFEVIELNASD------------------------ERTYDKIARYVQAAYTMDILG 99
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+ +D+ N + + P L + + + + A + E
Sbjct: 100 KRRKIIFLDE--ADN---------------IEPSGAPEIAKLIDRAR-NPIIMAANHYWE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + D A V +T + L +I ++E ++ E + +A+ + GD+R AI
Sbjct: 142 VPKEIRDR-AELVEYKRLTQRDVINALVRILKREGITVPKEVLVEIAKRASGDLRAAIND 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|148683676|gb|EDL15623.1| RIKEN cDNA C130052G03 [Mus musculus]
Length = 1746
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF--------------------- 165
D + S + LW EKY+P++ EL V+++ +W
Sbjct: 1027 DPSRDSGTEDMLWTEKYQPQNSNELIGNELAVKKLHSWLKDWKRRAELEERHNLKGKRDE 1086
Query: 166 -EERLGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
EE L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1087 KEEDLSDSTDFKGSSDDEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1139
>gi|126179196|ref|YP_001047161.1| replication factor C small subunit [Methanoculleus marisnigri JR1]
gi|150415672|sp|A3CUX9.1|RFCS_METMJ RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|125861990|gb|ABN57179.1| replication factor C small subunit [Methanoculleus marisnigri JR1]
Length = 322
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 52/272 (19%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTATV 195
+W EKY+PR L+E+ Q+ V ++++ + + N+ L+ TG AG+GKT
Sbjct: 7 IWIEKYRPRRLDEMVGQKDIVVRLQSYVK----------TGNLPHLLFTGSAGIGKTT-- 54
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
A+ AR + D+ WQ E +D N +I+ + TSP
Sbjct: 55 ---AAVALAREFFGDS-----WQTNFREMNASDE--RGIDVVRN---QIKEFARTSPLAG 101
Query: 256 GESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
K IL +D D T+ + A R + T+ T + C + +
Sbjct: 102 ATFK---ILFLDEADALTTDAQAALRRTME--------TYARTCRFILSCNYSSKIIDPI 150
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
QS + P+ ++ +I E +++ +D + + GD+R
Sbjct: 151 QSRCAIYR-----------FRPLDREAVIEETRRIAAAEGLTVTEGALDAIVYVASGDMR 199
Query: 374 QAITSLQFSS-LKQDPMLNLSLSISKPNFPEE 404
+AI +LQ ++ L+ D I+ PEE
Sbjct: 200 KAINALQGAAILRTDIDEETIFEITATARPEE 231
>gi|448534442|ref|ZP_21621737.1| replication factor C large subunit [Halorubrum hochstenium ATCC
700873]
gi|445704627|gb|ELZ56538.1| replication factor C large subunit [Halorubrum hochstenium ATCC
700873]
Length = 504
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 145/377 (38%), Gaps = 81/377 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHH----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A + ++ L +A +++ ++ SI L ICR+E ++ + +A+
Sbjct: 147 -----ANDYYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDICRKEGIEFESDALQQIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R A+ LQ ++ +D S++++ + RD+ L LF
Sbjct: 201 NRGDLRGAVNDLQAATQGRD-----SITVAD--------------VVTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH-GQARPVLDFL-HE 485
L L + + L Q A+ V + L ++ VL +A DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLAAWIE--NNVLDVYEPTEAVRAYDFLANA 295
Query: 486 NCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 296 DVWLGRVRATQNYSYWR 312
>gi|221507917|gb|EEE33504.1| replication factor C subunit, putative [Toxoplasma gondii VEG]
Length = 1260
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 113/283 (39%), Gaps = 46/283 (16%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-------------RLG 170
PD + +S T LWAEKY+P+ ++ R+ + ++ W +
Sbjct: 593 PDRQHSDENSGTL-LWAEKYRPKRADDFVGNREHLRTLQTWLADWADVCLHGIKKKPPPR 651
Query: 171 DSKDKFS-----------TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE 219
S FS +++G G+GKT R A G + E++ + +
Sbjct: 652 SSAPSFSPYGFAPTINLNARAALLSGPPGIGKTTAARLAAEAAGYDVLEYNA---SDARN 708
Query: 220 YMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFE 279
H G TS +F+++ SP + A +L+D++ +G + +
Sbjct: 709 KAHIEDIG-NMTSGGLTLHSFLDQKNEASRGSPGRNAKRPMGACVLMDEV---DGLSGGD 764
Query: 280 RL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITN 338
R Q ++ L+ ++ P + D + S +D + +P
Sbjct: 765 RGGAQAIVKLIETSKCPIICICN--------DRMHPKVRTIASKCLD-----LRFHPPHM 811
Query: 339 GSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
+++ + KI E SL + +D + +++GGD+RQ +TSLQ
Sbjct: 812 TALRSRVEKIAAAEDLSLDPQAVDYLCESAGGDLRQILTSLQM 854
>gi|358365643|dbj|GAA82265.1| chromosome transmission fidelity factor [Aspergillus kawachii IFO
4308]
Length = 1058
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 47/265 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P S+ + + VE+++ W + ++K F+ ++I G
Sbjct: 470 RLWTTKYAPTSMNMICGNKGVVEKLQNWLRDWHKNAKAGFNKPGKDGSGMYRSVMIHGPP 529
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+HL A+L +D + T ++ + N G L+ TS F +
Sbjct: 530 GIGKT-----TAAHLVAKLEGYDVVETNASDTRSKKLVENGLLGVLDTTSLQGYFSGVGK 584
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ +K + +L++D++ +G +A +R L + + THIP ++
Sbjct: 585 KVE-----------SAKKNLVLIMDEV---DGMSAGDRGGVGALASIAKKTHIPLILICN 630
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D ++ T I+ LS IC +E + + +
Sbjct: 631 E-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLRIPPQVL 677
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQ 386
D + + + DIRQ I L L Q
Sbjct: 678 DSLIEGTNADIRQVINMLSTVKLDQ 702
>gi|397780149|ref|YP_006544622.1| Replication factor C small subunit [Methanoculleus bourgensis MS2]
gi|396938651|emb|CCJ35906.1| Replication factor C small subunit Short=RFC small subunit
[Methanoculleus bourgensis MS2]
Length = 324
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 104/249 (41%), Gaps = 47/249 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+PR L+E+ Q+ V ++++ R G+ L+ TG AG+GKT
Sbjct: 9 IWIEKYRPRRLDEMVGQQDIVVRLQSYV--RTGNLPH------LLFTGSAGIGKTTAAVA 60
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A L ++ + ++E + + G++ +I+ + TSP
Sbjct: 61 LARELFGDSWQMN------FREMNASDERGIDVVRN---------QIKEFARTSPLAGAT 105
Query: 258 SKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
K +L +D D T+ + A R + T+ T + C + + QS
Sbjct: 106 FK---VLFLDEADALTTDAQAALRRTME--------TYARTCRFILSCNYSSKIIDPIQS 154
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ P+ ++ +++I E +++ +D + + GD+R+A
Sbjct: 155 RCAIYR-----------FRPLDREAVIEEITRIAAIEGLTVTEGALDAIVYVASGDMRKA 203
Query: 376 ITSLQFSSL 384
I +LQ +++
Sbjct: 204 INALQGAAI 212
>gi|374106711|gb|AEY95620.1| FACR102Wp [Ashbya gossypii FDAG1]
Length = 840
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 96/261 (36%), Gaps = 42/261 (16%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NV 180
+A + QLW KY P SL ++ + V ++ W E + ++ F T
Sbjct: 273 AAPRESDQLWTVKYAPTSLSQICGNKSSVGKLHKWLSEWDNNQRNGFKTPGRDGTGIYRA 332
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++ G G+GKT +A+ LG + E + + K L+ TS + F
Sbjct: 333 AMLYGPPGIGKTTAAHLVANELGYDVLEQNASDVRSKKLLNEGIKNALDNTSVIGYFNKK 392
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAV 298
R R ++++D++ +G R ++ Q R T P +
Sbjct: 393 EHRNSR--------------KFVIIMDEVDGMSGGDRGGVGQMAQ----FCRKTSSPLIL 434
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+ E T ++ D R+ S+K L I +E + L
Sbjct: 435 ICNE--------RTLPKMRPFDRVVCDIQFRRPDAQ-----SMKARLMTIAVREGFKLDP 481
Query: 359 EQIDLVAQASGGDIRQAITSL 379
+D + A+ GDIRQ I L
Sbjct: 482 TVVDQLVAATRGDIRQIINLL 502
>gi|344303413|gb|EGW33662.1| hypothetical protein SPAPADRAFT_59031 [Spathaspora passalidarum
NRRL Y-27907]
Length = 324
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + VE ++ +KD N ++I+G G+GKT +V +
Sbjct: 13 WVEKYRPYKLQDIVGNEETVERLKII-------AKDGNMPN-MIISGLPGIGKTTSVHCL 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPGE 257
A L EY H + LE + D + V +I+++ T +P
Sbjct: 65 AHEL--------------LGEYYH--QATLELNASDDRGIDVVRNKIKQFAQTKIVLP-P 107
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ I+L + +T G A + LR+ + + ST A C ++ + E
Sbjct: 108 GRHKIIILDEADSMTPG--AQQALRRTMEIYSNSTRFAFA-----CNQSSKI------IE 154
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
LQS + N + + + L +I + E+ ++E + + + GD+RQAI
Sbjct: 155 PLQS-----RCAILRYNKLADEEVLARLLEIAKMEEVKYNSEGLQALIFTAEGDMRQAIN 209
Query: 378 SLQ 380
+LQ
Sbjct: 210 NLQ 212
>gi|218884000|ref|YP_002428382.1| replication factor C small subunit [Desulfurococcus kamchatkensis
1221n]
gi|218765616|gb|ACL11015.1| replication factor C small subunit [Desulfurococcus kamchatkensis
1221n]
Length = 326
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 51/256 (19%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
S + LWAEKY+PR+L+E+ Q++ V ++ + EE+ + ++ G G GK
Sbjct: 2 SEEVELLWAEKYRPRTLDEVVNQKEVVVRLKKFVEEK--------NIPHMLFAGPPGTGK 53
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T IA L LY D +++YM E + E +++ + T
Sbjct: 54 TT----IAHCLAHDLYGDD------YRKYMLELNASDE-----RKIEVIRGKVKEFART- 97
Query: 252 PSIPGESKSSAILLID-DLPVTNGRTAFERLRQCLLLLVR---STHIPTAVVLTECGKAD 307
+ G+ +LL + D + + A RL + R + + P+ ++ +
Sbjct: 98 -RVVGDVPFKIVLLDEADNMTADAQQALRRLMELYSATTRFILTANYPSKII-------E 149
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
+ S F +P++ + L IC E+ + + ++ + +
Sbjct: 150 PIQSRTAIFR---------------FSPLSREDVVGRLKYICNAEKIECAEKALETIYEL 194
Query: 368 SGGDIRQAITSLQFSS 383
S GD+R+AI LQ ++
Sbjct: 195 SEGDMRRAINILQTAA 210
>gi|347965669|ref|XP_321857.5| AGAP001290-PA [Anopheles gambiae str. PEST]
gi|333470404|gb|EAA01207.6| AGAP001290-PA [Anopheles gambiae str. PEST]
Length = 1053
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 50/289 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVR-------AWFEERLG-------------DSKDKFST 178
W EKYKP S +++ Q V+ +W++ G DS F
Sbjct: 480 WVEKYKPSSTKQIIGQMGANSNVQRLTVWLSSWYKNNDGTKKHAKPNPWVKNDSGAAFKA 539
Query: 179 NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
+L +G GVGKT T + LG E++ + ++ ++ E
Sbjct: 540 ALL--SGPPGVGKTTTATLVCKELGFDTVEFNA----------SDTRSKRLLKEEVSELL 587
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAV 298
N +G S + S +LL+D++ G + Q L+ L++ +HIP
Sbjct: 588 NSKSLAGYFGGRSEKV----SSKHVLLMDEVDGMAGNEDRGGM-QELIALIKESHIP--- 639
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
V+ C D L + D + N IK + +C +EQ LS
Sbjct: 640 VICMCN-----DRNHPKIRSLVNYCFD-----LRFNRPRVEQIKGAMMSVCFKEQLKLSP 689
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKAD 407
++ + +GGD+RQ + L S + +LS+ +K + K D
Sbjct: 690 GVLEEIIAGTGGDVRQTLNHLALYSAGKSMAASLSVDSAKKHADSAKKD 738
>gi|326930974|ref|XP_003211612.1| PREDICTED: ATPase family AAA domain-containing protein 5-like
[Meleagris gallopavo]
Length = 1862
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 34/105 (32%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEE------------RLGDSKDKFS-------- 177
LW EKY+P+ EL +K++E + +W +E + G+ +DK
Sbjct: 1091 LWTEKYQPQDSSELVGNKKEIERLHSWLKEWKKRADWEEKRNQKGEKEDKEHQDSLDSLD 1150
Query: 178 --------------TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
N ++ITG GVGKTA V A LG +++E
Sbjct: 1151 FKDDKSDIEEENNLCNTVLITGPPGVGKTAAVYACAQELGFKIFE 1195
>gi|149235013|ref|XP_001523385.1| activator 1 37 kDa subunit [Lodderomyces elongisporus NRRL YB-4239]
gi|146452794|gb|EDK47050.1| activator 1 37 kDa subunit [Lodderomyces elongisporus NRRL YB-4239]
Length = 321
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L+++ + VE ++ +KD + ++I+G G+GKT +V +
Sbjct: 10 WVEKYRPRVLDDIVGNEETVERLKII-------AKDG-NIPHMIISGLPGIGKTTSVHCL 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK--LDEFENFVERIRRYGSTSPSIPG 256
A L + +EY H L + +D N +I+++ T IP
Sbjct: 62 AYEL-------------LGKEYYHQATMELNASDDRGIDVVRN---KIKQFAQTKILIP- 104
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
++ I+L + +T G A + LR+ + + +T A C ++ +
Sbjct: 105 PGRTKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFVFA-----CNQSLKI------I 151
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E LQS + N +++ + L +I + E + E + + ++ GD+RQAI
Sbjct: 152 EPLQS-----RCAILRYNKLSDEEVLARLLEIIKAEDVKFNNEGLQALIFSAEGDMRQAI 206
Query: 377 TSLQ 380
+LQ
Sbjct: 207 NNLQ 210
>gi|448637179|ref|ZP_21675555.1| replication factor C large subunit [Haloarcula sinaiiensis ATCC
33800]
gi|445764726|gb|EMA15870.1| replication factor C large subunit [Haloarcula sinaiiensis ATCC
33800]
Length = 508
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W E D ++ +++ G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKKWAE-TWDDHRE-----AVILYGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + EW PTI E + ++ + R+ + S ++
Sbjct: 57 ANDM-----EW----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE ++ + +A+ + GD+R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQELAEQNSGDLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|351710373|gb|EHB13292.1| ATPase family AAA domain-containing protein 5 [Heterocephalus glaber]
Length = 1829
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 38/154 (24%)
Query: 86 RQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKP 145
R + T K+K L E+++ E + P + N S S + LW EKY+P
Sbjct: 997 RMETETQKSKRKKLNEYSVNPEKISE--KPEELDRSNN-----FSDSGTEDMLWTEKYQP 1049
Query: 146 RSLEELAVQRKKVEEVRAWF---------EERLG------DSKDKFS------------- 177
++ EL ++++ +W EER + ++ FS
Sbjct: 1050 QNASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDEKQEDFSDSIDFQGSSDEEE 1109
Query: 178 ---TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
N ++ITG GVGKTATV A LG +++E
Sbjct: 1110 SRLCNTVLITGPTGVGKTATVYACAQELGFKIFE 1143
>gi|322705232|gb|EFY96819.1| putative replication factor C protein [Metarhizium anisopliae ARSEF
23]
Length = 1030
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 110/281 (39%), Gaps = 51/281 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITGQ 186
L KY P L + + +VE+++ W F+ R D ++I+G
Sbjct: 453 LLTSKYAPTQLSHICGNKAQVEKIQTWLRNWPKAKKYNFQRRGADGLG--GERAIIISGP 510
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT A+HL A+L +D + + + ++ + + + N +
Sbjct: 511 PGIGKT-----TAAHLAAKLEGYD-----VLESNASDVRSKKLVENGVSDVMNNTSLLGY 560
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGK 305
+ S+ +K +L++D++ +G +A +R L + T +P ++ E
Sbjct: 561 FAGDGKSV-DAAKKKIVLVMDEV---DGMSAGDRGGVGALAKFCKKTEVPLILICNE--- 613
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ +++ D A + N T ++ + IC +E L +D +
Sbjct: 614 --------RRLPKMKPF--DHVAFDIRFNRPTVDQVRSRIMTICHREGLKLPPPVVDALI 663
Query: 366 QASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKA 406
+ S DIRQ I + + L Q M NF E KA
Sbjct: 664 EGSNKDIRQIINMISAAKLDQTTM----------NFDEGKA 694
>gi|239610551|gb|EEQ87538.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
ER-3]
Length = 1068
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 45/264 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW +Y P SL + + VE++++W + F ++I G
Sbjct: 472 RLWTSRYAPTSLSMICGNKGAVEKLQSWLRNWRNSAMADFKKGGKDGTGLYRAVMIHGPP 531
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T + + G+ T+ L + F
Sbjct: 532 GIGKT-----TAAHLVAKLENYDVVESNASDTRSKSLVETGLQGVLDTTSLQGY--FSGE 584
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTE 302
+R S K + +L++D++ +G +A +R L + + T IP ++ E
Sbjct: 585 GKRVES--------GKKNLVLIMDEV---DGMSAGDRGGVGALAAVAKKTRIPMILICNE 633
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
S+ D R+ + I+ LS IC +E ++ + +D
Sbjct: 634 --------RRLPKMRPFDSVTFDLQFRRPTVE-----QIRARLSTICYREGLKITPQVLD 680
Query: 363 LVAQASGGDIRQAITSLQFSSLKQ 386
+ Q + DIRQ I L + L Q
Sbjct: 681 NLIQGTHADIRQVINMLSTAKLDQ 704
>gi|448524726|ref|XP_003869003.1| Rfc4 heteropentameric replication factor C subunit [Candida
orthopsilosis Co 90-125]
gi|380353356|emb|CCG22866.1| Rfc4 heteropentameric replication factor C subunit [Candida
orthopsilosis]
Length = 320
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 110/243 (45%), Gaps = 43/243 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + +E ++ ++ G+ + ++I+G G+GKT ++ +
Sbjct: 9 WVEKYRPHVLDDIVGNEETIERLKVIVQD--GNMPN------MIISGLPGIGKTTSIHCL 60
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIPGE 257
A L + +E+ H + LE + D + V +I+++ T S+P
Sbjct: 61 AYEL-------------LGKEHYH--QATLELNASDDRGIDVVRNKIKQFAQTKISLP-P 104
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++ I+L + +T G A + LR+ + + +T A C ++ + E
Sbjct: 105 GRTKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CNQSSKI------IE 151
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
LQS + N +++ + + L I + E + E + + ++ GD+RQAI
Sbjct: 152 PLQS-----RCAILRYNKLSDEEVLKRLLDIIKLENVQYNNEGLQALIFSAEGDMRQAIN 206
Query: 378 SLQ 380
++Q
Sbjct: 207 NMQ 209
>gi|222480222|ref|YP_002566459.1| replication factor C large subunit [Halorubrum lacusprofundi ATCC
49239]
gi|254797629|sp|B9LPV1.1|RFCL_HALLT RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|222453124|gb|ACM57389.1| AAA ATPase central domain protein [Halorubrum lacusprofundi ATCC
49239]
Length = 500
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 145/379 (38%), Gaps = 85/379 (22%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + W R D + +V+ G GVGKT+ +
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFADW--ARSWDDHHE----AVVLHGSPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS------TSP 252
A+ +G W+ N D E F R R +
Sbjct: 58 ANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSAAGGG 100
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKADSVDS 311
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 101 AAGGDTASRQLVILDEADNIHGN--YDRGGASAITELVKESGQPIVLI------------ 146
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
A + ++ L +A +++ ++ SI L ICR+E ++ ++ +A+ + GD
Sbjct: 147 -ANDYYDMARGLRNA-TQEIEFRDVSARSIVPVLRDICRKEGIEFESDALERIAERNRGD 204
Query: 372 IRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKF 431
+R AI LQ ++ +D SI+ + + RD+ L LF L
Sbjct: 205 LRGAINDLQAATEGRD-------SIAVEDV------------VTGDRDKALGLFPYLDAV 245
Query: 432 LHNKRETDNLVKMDQDAFVVKDKFSRLP-------LKMDAPEKVLSQAHGQARPVLDFL- 483
L + + L Q A+ V + L L + P +V+ DFL
Sbjct: 246 LKEESAEEAL----QSAYAVDETPDDLTKWIENNVLDVYDPSEVVR--------AYDFLA 293
Query: 484 HENCWLDIMRQTMFYNLLR 502
+ + WL +R T Y+ R
Sbjct: 294 NADVWLGRVRATQNYSYWR 312
>gi|67467166|ref|XP_649703.1| Activator 1 140 kDa subunit [Entamoeba histolytica HM-1:IMSS]
gi|56466194|gb|EAL44317.1| Activator 1 140 kDa subunit, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 718
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---EERLGDSKDKFSTNVLVI 183
++ + +S + +W EKY+P++ +L + ++ + W E+ + D + +++
Sbjct: 234 ENTTVINSNEIIWTEKYRPQTKSDLIGNKNQIAKFYTWINKWEKVIPDRR------AVLL 287
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G GVGKT + + LG E++ T E ++R
Sbjct: 288 AGAPGVGKTTVSKIVGKTLGFNPIEFNASD-----------------TRNKSSIELAIKR 330
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTE 302
I G S I G ++++D++ +G ++ +R L+ ++ T P
Sbjct: 331 IFLNGQIS--IDGSKNKKPLIIMDEV---DGMSSGDRGGITELVKYIKETEQPIV----- 380
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D +D Q L ++ K++++ +T L IC +E +S E ++
Sbjct: 381 CICNDIMDKKMQP---LINVCETINFSKISVSELT-----ERLKYICDKEGVHVSDENLN 432
Query: 363 LVAQASGGDIRQAITSLQ 380
+A + GD+R I LQ
Sbjct: 433 QIASKAHGDVRYGINMLQ 450
>gi|350590646|ref|XP_003131787.3| PREDICTED: ATPase family AAA domain-containing protein 5 [Sus scrofa]
Length = 1719
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 914 DSSKDSGTEDMLWTEKYQPQNSSELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 973
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ T N ++ITG GVGKTA V A LG +++E
Sbjct: 974 KQEDPLDSIDFKGSSDDEEETRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1027
>gi|432102190|gb|ELK29996.1| ATPase family AAA domain-containing protein 5 [Myotis davidii]
Length = 1788
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 47/166 (28%)
Query: 80 ALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSST---- 135
+L S +R++ T + C +E A++ +V +++ D S S SS
Sbjct: 944 SLYSKTRRKTQTAVSTTCEVESEAVEDSDVL----------IIDDDKASTSEISSVPDSG 993
Query: 136 --QQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER-------------LGD 171
LW EKY+P++ EL ++++ +W EER L D
Sbjct: 994 TEDMLWTEKYQPQNSSELIGNELAIKKLYSWLKDWKRRAELEERQNLKGKRDEKQEDLSD 1053
Query: 172 SKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
S D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1054 SIDFKGSSDEEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1099
>gi|426200510|gb|EKV50434.1| hypothetical protein AGABI2DRAFT_200125 [Agaricus bisporus var.
bisporus H97]
Length = 349
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 55/256 (21%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTAT 194
Q W EKY+P+++E+++ Q + +R K STN+ ++ G G GKT+T
Sbjct: 25 QPWVEKYRPKTIEDVSAQEHTIAVLR----------KTLTSTNLPHMLFYGPPGTGKTST 74
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL--DEFENFVERIRRY----- 247
+ +A L P ++ + E + ++ +NF + R
Sbjct: 75 ILALARQLFG---------PDNFKNRVLELNASDERGISIVREKIKNFARQTPRAQAVAS 125
Query: 248 -GSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
G T P P + I+++D D + + A R+ + + R + C
Sbjct: 126 DGKTYPCPPYK-----IIILDEADSMTQDAQGALRRIMETYARITRFCLV--------CN 172
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
+ E L S K P+ + S L+ I ++EQ + T ID +
Sbjct: 173 YVTRI------IEPLAS-----RCSKFRFTPLDSESATSRLTYIAKEEQIDVDTSVIDAL 221
Query: 365 AQASGGDIRQAITSLQ 380
S GD+R+AIT LQ
Sbjct: 222 ITVSNGDLRRAITYLQ 237
>gi|402591965|gb|EJW85894.1| hypothetical protein WUBG_03196, partial [Wuchereria bancrofti]
Length = 171
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
+++ +++E+LAV KK++E+R W + + G + +L++TG G GKT V+ +
Sbjct: 70 DRFPLQNVEQLAVNPKKIDELRRWMQMKEGRCR---RCKLLLLTGPTGSGKTTAVKMLCR 126
Query: 201 HLGARLYEWD 210
L L EW+
Sbjct: 127 ELKLELIEWN 136
>gi|11498795|ref|NP_070024.1| replication factor C large subunit [Archaeoglobus fulgidus DSM
4304]
gi|42559326|sp|O29072.1|RFCL_ARCFU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=afRFC large subunit; Short=afRFCla
gi|2649392|gb|AAB90051.1| activator 1, replication factor C, 53 KD subunit [Archaeoglobus
fulgidus DSM 4304]
Length = 479
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 48/250 (19%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P++LEE+ + + V W + SK L++ G GVGKT+
Sbjct: 2 LWVEKYRPKTLEEVVADKSIITRVIKWAKSWKRGSKP------LLLAGPPGVGKTSLALA 55
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP-- 255
+A+ +G E + W+ +ERI G+ + +I
Sbjct: 56 LANTMGWEAVELNASDQRSWR---------------------VIERIVGEGAFNETISDE 94
Query: 256 GESKSSAI-----LLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
GE SS I +++D++ + + + L+ R P ++ + K
Sbjct: 95 GEFLSSRIGKLKLIILDEVDNIHKKEDVGGEAALIRLIKRKPAQPLILIANDPYKLSP-- 152
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
EL+++ + +T + R L +I +E + + +A+ +GG
Sbjct: 153 -------ELRNL-----CEMINFKRLTKQQVARVLERIALKEGIKVDKSVLLKIAENAGG 200
Query: 371 DIRQAITSLQ 380
D+R AI Q
Sbjct: 201 DLRAAINDFQ 210
>gi|15790579|ref|NP_280403.1| replication factor C large subunit [Halobacterium sp. NRC-1]
gi|10581095|gb|AAG19883.1| replication factor C large subunit [Halobacterium sp. NRC-1]
Length = 501
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P SL E+ + + W E D ++ +V+ G G+GKT+ +
Sbjct: 34 WTEKYRPASLSEVRGNDTARDALAEWAET-WPDHRE-----AVVVHGSPGIGKTSAAHAL 87
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G WD +E + + VER+ + S ++ G S
Sbjct: 88 ANDAG-----WDV----------------VELNASDQRTADVVERVAGEAARSGTLTGGS 126
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++L+D+ +G +R + LV P +V E +
Sbjct: 127 GGRKLVLLDEADNLHGN--IDRGGSAAITRLVDDAPQPIVLVANE-------------YY 171
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
E+ S L A R++ ++ SI L +CR+E + + + +A+ + GD+R A+
Sbjct: 172 EMSSSLRSA-CREIEFRDVSKRSIVPVLRDVCRREDVTYEEDALAAIAEQNAGDLRSAVN 230
Query: 378 SLQ 380
LQ
Sbjct: 231 DLQ 233
>gi|333911577|ref|YP_004485310.1| replication factor C large subunit [Methanotorris igneus Kol 5]
gi|333752166|gb|AEF97245.1| Replication factor C large subunit [Methanotorris igneus Kol 5]
Length = 502
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 104/246 (42%), Gaps = 42/246 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P++L+E+A + E+++ W E+ + K +++ G G GKT +
Sbjct: 4 WVEKYRPKTLKEVAGHNEIKEKLKKWIEDHIKGKNPK----PIILVGNPGCGKTTLAHAL 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + H T ++S S+ G+
Sbjct: 60 ANDYGFDVIELNASDKRNRAAIRHIVGT---------------------AASSKSLTGK- 97
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
+ ++++D++ +G + + +L +++ P ++LT D T + +
Sbjct: 98 --NILIILDEVDGISGTEDSGGVSE-ILKVIKEAKNP--IILTAN---DIYKPTLKPLRD 149
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + + + + +I L +I +E + + + ++A+ SGGD+R AI
Sbjct: 150 VCEV--------INVPNVHTNTILAVLKRIAEKEGLDVDEKTLKIIAKHSGGDLRAAIND 201
Query: 379 LQFSSL 384
L+ +L
Sbjct: 202 LEALAL 207
>gi|145232225|ref|XP_001399565.1| replication factor C subunit 1 [Aspergillus niger CBS 513.88]
gi|134056478|emb|CAK37567.1| unnamed protein product [Aspergillus niger]
Length = 1058
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 47/265 (17%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P S+ + + VE+++ W + ++K F+ ++I G
Sbjct: 470 RLWTTKYAPTSMNMICGNKGVVEKLQNWLRDWHKNAKAGFNKPGKDGSGMYRSVMIHGPP 529
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+HL A+L +D + T ++ + N G L+ TS F +
Sbjct: 530 GIGKT-----TAAHLVAKLEGYDVVETNASDTRSKKLVENGLLGVLDTTSLQGYFSGVGK 584
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ +K + +L++D++ +G +A +R L + + THIP ++
Sbjct: 585 KVE-----------SAKKNLVLIMDEV---DGMSAGDRGGVGALASIAKKTHIPLILICN 630
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
E + +++ D ++ T I+ LS IC +E + + +
Sbjct: 631 E-----------RRLPKMKPF--DHVTYELPFRRPTAEQIRARLSTICFREGLRIPPQVL 677
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQ 386
D + + + DIRQ I L L Q
Sbjct: 678 DSLIEGTNADIRQVINMLSTVKLDQ 702
>gi|331246527|ref|XP_003335896.1| replication factor C subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1470
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 109/268 (40%), Gaps = 41/268 (15%)
Query: 122 VNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST--- 178
+ P S S +S QLW KY P++L +L + ++++++AW + + F+
Sbjct: 165 LGPPKGSVSEKTSAGQLWTVKYAPKNLGDLCGNKTQIDKIQAWLRDWSKFRRSNFTKPGK 224
Query: 179 ------NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
+V++G GVGKT+ +A G + E + + T ++ + +TG +
Sbjct: 225 DGLGMYRCVVLSGPPGVGKTSAAHLVAKAEGYEVIELNA-SDTRSKKLL---ETGFKDII 280
Query: 233 KLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRS 291
F+E + +S ++LI D +G +A +R L L++
Sbjct: 281 GNSSIAGFLETSTK------------RSEKLVLIMD--EVDGMSAGDRGGVGALNALIKK 326
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
+ IP + D + + L++ + R+ +N I+ + I +
Sbjct: 327 SQIPIIAIAN--------DMSIPKMKPLKATALSLVFRRPNVN-----MIRSRMMSIAFK 373
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSL 379
E + ID + S DIRQ I L
Sbjct: 374 EGMKIPPNAIDQLVAGSQSDIRQIINML 401
>gi|300175670|emb|CBK20981.2| unnamed protein product [Blastocystis hominis]
Length = 344
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 124/291 (42%), Gaps = 56/291 (19%)
Query: 100 EEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVE 159
EE+A+QKE E L+ DHD S+ L+ KY P S++E+ +E
Sbjct: 84 EENAVQKE-----------ETLMK-DHDFVSSD-----LFTVKYAPSSIKEIIGNEGIIE 126
Query: 160 EVRAWFEE----------RLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW 209
V+ W + + + ++++G G+GKT + IA G + E
Sbjct: 127 NVKQWLTQWDDVFIHKRITVKHTSQNPDAKAVLLSGPPGIGKTTSAHIIAKECGYEIVEL 186
Query: 210 ---DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLI 266
DT Q + ++ + T + +F + + + P + G + + ++++
Sbjct: 187 NASDTRNRKSVQRFFND----MIVTKNVHQFFSDHSSAKTDSQSKPKV-GNANAKILVVM 241
Query: 267 DDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDA 326
D++ G L+ ++ ++ IP ++ C D+ +++QS+
Sbjct: 242 DEVDGMGGGDRGGIGE--LIQVIEASMIP---IICICNDRDN--------KKIQSL---- 284
Query: 327 GARKV---ALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
ARK + + ++ L IC++E+ ++S + + ++SGGD+RQ
Sbjct: 285 -ARKCYDCSFGKLPQDAMITRLQFICKKEEIAMSKADLAELVESSGGDMRQ 334
>gi|50292909|ref|XP_448887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528200|emb|CAG61857.1| unnamed protein product [Candida glabrata]
Length = 854
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 97/254 (38%), Gaps = 40/254 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P SL+++ + V +++ W + + F T ++ G
Sbjct: 296 KLWTVKYAPTSLQQVCGNKTSVNKLKTWLSNWEANKSNGFKTPGRDGTGIYRAAMLYGPP 355
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A LG + E + K L+ S + +N
Sbjct: 356 GIGKTTAAHLVAKELGYDVLEQNASDVRSKSLLNGGVKNALDNFSIVGLLQN-------- 407
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
T+ S + + ++++D++ +G R +L Q R T P ++ E
Sbjct: 408 DKTANS----NGTKFVIVMDEVDGMSGGDRGGVGQLAQ----FCRKTSTPLILICNE--- 456
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
T + +D R+ N SIK L I +E++ L ID +
Sbjct: 457 -----RTLPKMRPFDRVCLDIQFRRPDAN-----SIKARLMTIAVREKFKLDPNVIDKLV 506
Query: 366 QASGGDIRQAITSL 379
QA+ GDIRQ I L
Sbjct: 507 QATRGDIRQIINLL 520
>gi|169236316|ref|YP_001689516.1| replication factor C large subunit [Halobacterium salinarum R1]
gi|42559531|sp|Q9HPI4.2|RFCL_HALSA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|226739138|sp|B0R601.1|RFCL_HALS3 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|167727382|emb|CAP14170.1| replication factor C large subunit [Halobacterium salinarum R1]
Length = 471
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P SL E+ + + W E D ++ +V+ G G+GKT+ +
Sbjct: 4 WTEKYRPASLSEVRGNDTARDALAEWAET-WPDHRE-----AVVVHGSPGIGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G WD +E + + VER+ + S ++ G S
Sbjct: 58 ANDAG-----WDV----------------VELNASDQRTADVVERVAGEAARSGTLTGGS 96
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++L+D+ +G +R + LV P +V E +
Sbjct: 97 GGRKLVLLDEADNLHGN--IDRGGSAAITRLVDDAPQPIVLVANE-------------YY 141
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
E+ S L A R++ ++ SI L +CR+E + + + +A+ + GD+R A+
Sbjct: 142 EMSSSLRSA-CREIEFRDVSKRSIVPVLRDVCRREDVTYEEDALAAIAEQNAGDLRSAVN 200
Query: 378 SLQ 380
LQ
Sbjct: 201 DLQ 203
>gi|332796204|ref|YP_004457704.1| DNA replication factor C, small subunit [Acidianus hospitalis W1]
gi|332693939|gb|AEE93406.1| DNA replication factor C, small subunit [Acidianus hospitalis W1]
Length = 326
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 43/246 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+PRSL+++ Q+ VE ++ + +E+ + L+ G G GKT
Sbjct: 6 LWAEKYRPRSLDDIVNQKDIVERLKRFVKEK--------NMPHLLFAGPPGTGKTTAALA 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ L YE + E + + G +D N V+ R S S+P +
Sbjct: 58 LVHDLYGDSYEQ------FFLELNASDERG------IDVIRNKVKEFAR-TMVSSSVPFK 104
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
++L+D+ A + LR+ + L ST A C + QS
Sbjct: 105 -----VILLDEADNMTA-DAQQALRRTMELYTESTRFILA-----CNYLSKIIDPIQSRT 153
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
L P+ + L I ++E+ + ++ + + GD+R+AI
Sbjct: 154 AL-----------FRFYPLKKEDVVSRLEFIAKEEKVEYDEKALETIYDVTMGDMRKAIN 202
Query: 378 SLQFSS 383
+LQ +S
Sbjct: 203 TLQAAS 208
>gi|402466617|gb|EJW02070.1| hypothetical protein EDEG_03494 [Edhazardia aedis USNM 41457]
Length = 453
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 103/250 (41%), Gaps = 46/250 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+P+ +E+L + +++++ + K + +++G G+GKT +
Sbjct: 129 MWCEKYRPQKIEDLVGNQTVIDQLKKYLT-------GKVNKQAALLSGNPGIGKTTSALV 181
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ LG + E++ + +K + +R+ Y +S SI
Sbjct: 182 VCRDLGFEVVEFNAS----------------DVRNKGEISRQIKDRLNVYALSSSSI--- 222
Query: 258 SKSSAILLIDDLP-VTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+L++D++ +T+ R L +++ T +P + D + Q
Sbjct: 223 --KKRVLIMDEIDGMTSDRGGLAELSN----IIKKTSVPIICICN--------DRSNQKI 268
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L + VD RK+ + IK L K E ++ I+ + + S GD+R +
Sbjct: 269 RTLANYCVDLRFRKLDARQMV-PRIKWILEK----EGKNIRENMINEIVKNSNGDLRYCL 323
Query: 377 TSLQFSSLKQ 386
+LQ +++
Sbjct: 324 NTLQNMCIRE 333
>gi|398826287|ref|ZP_10584537.1| DNA polymerase III, subunit gamma/tau, partial [Bradyrhizobium sp.
YR681]
gi|398221397|gb|EJN07815.1| DNA polymerase III, subunit gamma/tau, partial [Bradyrhizobium sp.
YR681]
Length = 450
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 37/265 (13%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLV 182
P+ DSAS + + ++ A KY+P S ++L Q V V FE R+ +
Sbjct: 8 PNADSASPAGTPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRI--------PQAWI 59
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH-NCKTGLEYTSKLDEFE--- 238
+TG GVGKT T R +A L + + PTI + +C+ +E + +D E
Sbjct: 60 LTGVRGVGKTTTARILARALNYEMPDGSVKGPTIHMPTLGVHCQAIME-SRHMDVLEMDA 118
Query: 239 ---NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIP 295
V+ +R+ + P ++ + +ID++ + + AF + L H
Sbjct: 119 ASHTGVDDVRQINDSVRYAPASARYK-VYIIDEVHMLST-AAFNAFLKTLEE--PPEHAK 174
Query: 296 TAVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
TE K +V S Q F +L+ + D + + L+ I +E
Sbjct: 175 FVFATTEIRKVPVTVLSRCQRF-DLRRVEADV--------------LMKHLANIAAKENV 219
Query: 355 SLSTEQIDLVAQASGGDIRQAITSL 379
+ E + ++A+A+ G +R +++ L
Sbjct: 220 EIEPEALGIIARAAEGSVRDSLSLL 244
>gi|307353132|ref|YP_003894183.1| Replication factor C [Methanoplanus petrolearius DSM 11571]
gi|307156365|gb|ADN35745.1| Replication factor C [Methanoplanus petrolearius DSM 11571]
Length = 324
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+P++L+++ Q++ V ++++ + S L+ TG AG+GKT +
Sbjct: 7 IWTEKYRPKTLDDVVGQKEIVARLKSYVK--------TGSLPHLLFTGPAGIGKTTSAVA 58
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A ++ + ++E + + G++ +I+++ T+P E
Sbjct: 59 LAREFFGENWQVN------FRELNASDERGIDVVRN---------QIKQFARTAPMGGAE 103
Query: 258 SKSSAILLIDDL-PVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K IL +D+ +TN A LR+ + + T + C + + QS
Sbjct: 104 FK---ILFLDEADALTNDAQA--ALRRTM-----ENYAYTCRFILSCNYSSKIIDPIQSR 153
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L P+ ++ L++I + E S++ + + + + GD+R+AI
Sbjct: 154 CALYR-----------FRPLDREAVTEELNRIAKTEGLSITEDAMSAIIYVAQGDMRKAI 202
Query: 377 TSLQFSSL 384
+LQ ++
Sbjct: 203 NALQGGAI 210
>gi|322797318|gb|EFZ19436.1| hypothetical protein SINV_09794 [Solenopsis invicta]
Length = 353
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 48/248 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR+++++ Q + V +R E GD + ++ G G GKT+ +
Sbjct: 67 WVEKYRPRNVDDIVEQTEVVNVIRQAMEH--GDFPN------MLFYGPPGTGKTSIIHAA 118
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A + +Y+ E + G++ D+ ++F +RR +P+ P
Sbjct: 119 ARQMFGSMYK------DRILELNASDDRGIQVVR--DKIKSFA--LRR---ANPNGPDGK 165
Query: 259 KSSA--ILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K I+++D+ G +TA R+ + + +H ++
Sbjct: 166 KCPPFKIVILDEADSMTGAAQTALRRIME------KESHSTRFCLVCN------------ 207
Query: 315 SFEELQSILVDAGAR--KVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
L I+ +R K P+T+ L IC +E ++ + QASGGD+
Sbjct: 208 ---YLSRIIKPIASRCTKFRFKPLTDEKSIARLEYICNEENLKADRSVLEKIVQASGGDL 264
Query: 373 RQAITSLQ 380
RQA+ LQ
Sbjct: 265 RQAVMCLQ 272
>gi|374724606|gb|EHR76686.1| replication factor C large subunit [uncultured marine group II
euryarchaeote]
Length = 511
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 139 WAEKYKP---RSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTAT 194
W E+++P R LE VQR+K+ RAW ++ + G K K +++ G GVGKT+
Sbjct: 7 WTERHRPTSERHLEGNEVQRRKI---RAWLDDWQNGTPKKK----AILLAGPPGVGKTSV 59
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
R IA LG W+ +E + + + GST S+
Sbjct: 60 ARAIAQDLG-----WNV----------------IELNASDARNAAAIRKAATQGSTHRSL 98
Query: 255 ---PGESKSSAILLIDDLPVTNG--------------RTAFERLRQC-----------LL 286
P K ++L+D++ +G + A E R+ LL
Sbjct: 99 FHDPSAKKQRTLILLDEVDHISGGLRAVSQDRIDKAMQGADESGREVKLHGDSGGKAELL 158
Query: 287 LLVRSTHIPTAVVLTEC----GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
L+ +T P + E GK + +T F+ I + +N +++
Sbjct: 159 HLLANTKQPVILACNEIMGLWGKGSTWRNTRDRFKPHLEI--------ITFERASNEALR 210
Query: 343 RTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQ-FSSLKQDPMLNLSLSISKPNF 401
R ++ R+E + + ++ GD+R + LQ +S Q SI+K
Sbjct: 211 RIAKRVLREENLDFDDAAVSALVTSNPGDLRALVRDLQVLASTAQG-------SITKAMV 263
Query: 402 PEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETD 439
+ G RD TL +F L RETD
Sbjct: 264 VAQAESGR--------RDTTLEVFPGLDALY---RETD 290
>gi|299472502|emb|CBN77287.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 978
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 114/281 (40%), Gaps = 54/281 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLG---------DSKDKFSTNVLVITGQA 187
Q+W +KYKP S + +V++++ W + G KD +++G
Sbjct: 444 QMWVDKYKPTSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPTGKDNPGARAALLSGVP 503
Query: 188 GVGKTATVRQIASHLGARLYEW---DTPTPTIWQEYMHNCKTG--LEYTSKLDEFENFVE 242
GVGK++T +A +G + E DT + E + + L +T+
Sbjct: 504 GVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGGGGGTTTG 563
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
R+ ++++D++ +G +R Q L+LL++ + +P ++
Sbjct: 564 GFRKQ---------------LVVMDEV---DGMGGSDRGGIQELILLIKKSRVP---IIA 602
Query: 302 ECGKADSVDSTAQSFEELQSILVD---AGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
C D Q L + D A +KV +I + + + + E +
Sbjct: 603 ICN-----DRQHQKIRSLVNHCYDLRFARPQKV--------TIAKRVKAVAKMEGMDVDD 649
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPM--LNLSLSIS 397
+++ +A+G DIRQ + +LQ S K M +NL IS
Sbjct: 650 NAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNLKGGIS 690
>gi|426348833|ref|XP_004042028.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Gorilla
gorilla gorilla]
Length = 1796
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 994 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1053
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1054 KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1107
>gi|390938548|ref|YP_006402286.1| replication factor C [Desulfurococcus fermentans DSM 16532]
gi|390191655|gb|AFL66711.1| Replication factor C [Desulfurococcus fermentans DSM 16532]
Length = 326
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 53/257 (20%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
S + LWAEKY+PR+L+E+ Q++ V ++ + EE+ + ++ G G GK
Sbjct: 2 SEEVELLWAEKYRPRTLDEVVNQKEVVVRLKKFVEEK--------NIPHMLFAGPPGTGK 53
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T IA L LY D +++YM E K++ V+ R
Sbjct: 54 TT----IAHCLAHDLYGDD------YRKYMLELNASDE--RKIEVIRGKVKEFAR-ARVV 100
Query: 252 PSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVR---STHIPTAVVLTECGKA 306
+P + I+L+D D + + A RL + R + + P+ ++
Sbjct: 101 GDVPFK-----IVLLDEADNMTADAQQALRRLMELYSATTRFILTANYPSKII------- 148
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ + S F +P++ + L IC E+ + + ++ + +
Sbjct: 149 EPIQSRTAIFR---------------FSPLSREDVVGRLKYICNAEKIECAEKALETIYE 193
Query: 367 ASGGDIRQAITSLQFSS 383
S GD+R+AI LQ ++
Sbjct: 194 LSEGDMRRAINILQTAA 210
>gi|145552042|ref|XP_001461697.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429533|emb|CAK94324.1| unnamed protein product [Paramecium tetraurelia]
Length = 384
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 52/248 (20%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+P++L+E+ V+++RA ++G+ + +++ G G+GKT++V
Sbjct: 6 IWLEKYRPKTLDEVHGNSDIVDKLRAI--AKMGNLPN------IILVGPPGIGKTSSVLC 57
Query: 198 IASH-LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE-FENFVERIRRYGSTSPSIP 255
+A LG + E + LE + D E E+I+ + ++
Sbjct: 58 LARQILGDSIKE-----------------SVLELNASDDRGIETVREQIKGFAQKKVNLQ 100
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
E + ++L + +T G +Q L +++ T VL+ C DST
Sbjct: 101 -EGQHKIVILDEADSLTEGA------QQALRMIISDYSTSTRFVLS-CN-----DSTK-- 145
Query: 316 FEELQSILVDAGARKVAL---NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
L+DA + + N + I+ L +I QE + + + +D + + GD+
Sbjct: 146 -------LIDAIQSRCCILRFNRLGEKEIRDRLLEIISQESVTYTKDGLDALTFTAEGDM 198
Query: 373 RQAITSLQ 380
RQAI +LQ
Sbjct: 199 RQAINNLQ 206
>gi|213406089|ref|XP_002173816.1| chromosome transmission fidelity protein [Schizosaccharomyces
japonicus yFS275]
gi|212001863|gb|EEB07523.1| chromosome transmission fidelity protein [Schizosaccharomyces
japonicus yFS275]
Length = 825
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 111/303 (36%), Gaps = 62/303 (20%)
Query: 119 EGLVNPDHDSASASSSTQQ----LWAEKYKPRSLEELAVQRKKVEEVRAWFEE------- 167
E L++PD S S S T + LW +KY+P+ +L + W +E
Sbjct: 197 ERLLDPDTSSVSVYSQTSKTDGLLWTDKYRPQLFRDLVGDERVHRSAMHWIKEWDSCVFG 256
Query: 168 ------RLGDSKDKFSTN--------VLVITGQAGVGKTATVRQIASHLGARLYEW---- 209
R G +K + + VL++TG G GKT IA G + E
Sbjct: 257 LSPPPSRNGTAKPQLKLDPYGRPEKRVLLLTGPPGSGKTTLAHVIARQAGYNVVEVNASD 316
Query: 210 DTPTPTIWQEYMHNCKTGLEYTSK-----LDEFENFVERIRRYGSTSPSIPGESKSSAIL 264
D T+ Q+ T ++S+ DE + PG +++ A L
Sbjct: 317 DRTANTVKQKIAEAINTHTAFSSRPTCIVADEIDG-------------GDPGFARALADL 363
Query: 265 LIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILV 324
LI D T+ T ++ + R+T+ + C D + ++
Sbjct: 364 LIGDERATSAITNSQKRK-------RNTNRKLILRPIICICNDVFTPSLRTLRPY----- 411
Query: 325 DAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSL 384
AR V P ++ L +CR + + + + ++ DIR ++ +LQ S
Sbjct: 412 ---ARIVYFKPAPQAALVGRLRTVCRLQGLNADSRSLTVLTDLCKFDIRSSLNALQMLSR 468
Query: 385 KQD 387
D
Sbjct: 469 HSD 471
>gi|403418247|emb|CCM04947.1| predicted protein [Fibroporia radiculosa]
Length = 972
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 30/256 (11%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T QLW ++Y P++++E+ K +++ F++ D + F ++ITG G+GKT +
Sbjct: 408 TNQLWTDRYAPQTVKEI-CGNKGPSSLKSSFKKPGKDGMNVF--RAVLITGPPGIGKTTS 464
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+H+ A+L + TP K +E ++ + N G T+ +
Sbjct: 465 -----AHMCAKLEGF---TPIELNASDARSKKLVENSTNI---ANTSLDGWMTGGTATNA 513
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
G + + LI D +G +A +R L L+R T IP + + G A
Sbjct: 514 AGVTITDKTCLIMD--EVDGMSAGDRGGVGALSALIRKTKIPIICIANDRG--------A 563
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
+ L ++ + RK +N I + R LS I +E+ + ID + + + DIR
Sbjct: 564 LKLKPLANVAFNLTYRKPEVNAIRS----RILS-IAFKEKMKVPANVIDQLIEGAQSDIR 618
Query: 374 QAITSLQFSSLKQDPM 389
Q + L L D M
Sbjct: 619 QVLNMLSTWKLSSDTM 634
>gi|26080431|ref|NP_079133.3| ATPase family AAA domain-containing protein 5 [Homo sapiens]
gi|296439460|sp|Q96QE3.4|ATAD5_HUMAN RecName: Full=ATPase family AAA domain-containing protein 5; AltName:
Full=Chromosome fragility-associated gene 1 protein
gi|21615526|emb|CAC44537.2| ATP(GTP)-binding protein [Homo sapiens]
gi|49175359|gb|AAT52049.1| chromosome fragility associated gene 1 [Homo sapiens]
gi|151556414|gb|AAI48344.1| ATPase family, AAA domain containing 5 [synthetic construct]
gi|261857508|dbj|BAI45276.1| ATPase family, AAA domain containing 5 [synthetic construct]
Length = 1844
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1042 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1101
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|242398095|ref|YP_002993519.1| Replication factor C large subunit [Thermococcus sibiricus MM 739]
gi|242264488|gb|ACS89170.1| Replication factor C large subunit [Thermococcus sibiricus MM 739]
Length = 487
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 98/244 (40%), Gaps = 50/244 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EKY+P+ L ++ Q K +E+++ W EE L G K K L++ G G GKT TV
Sbjct: 4 WTEKYRPKRLVDIVNQDKALEKIKPWIEEWLHGIPKKK----ALLLAGPPGSGKTTTVYA 59
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A+ + E + + +I RY + + ++
Sbjct: 60 LANEYKFEVIELNASDDRTFG------------------------KIERYLNAAYTMDVF 95
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA-DSVDSTAQSF 316
+ ++ +D++ A E + GKA + + +A +
Sbjct: 96 GRRRKLIFLDEVDNIEPSGAKE-------------------IAKLIGKAQNPIMMSANRY 136
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E+ I + A V ++ I + L +I + E + E + ++AQ + GD+R AI
Sbjct: 137 WEV-PIEIRNKAEIVQYKRLSQRDILKALFRITKAEGIFVPKEVLQMIAQRARGDLRAAI 195
Query: 377 TSLQ 380
LQ
Sbjct: 196 NDLQ 199
>gi|397481609|ref|XP_003812033.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Pan
paniscus]
Length = 1847
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1042 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1101
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|288932435|ref|YP_003436495.1| ATPase AAA [Ferroglobus placidus DSM 10642]
gi|288894683|gb|ADC66220.1| AAA ATPase central domain protein [Ferroglobus placidus DSM 10642]
Length = 506
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 32/243 (13%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P++++++ ++ V W E + K L+ G GVGKT+
Sbjct: 2 LWVEKYRPKTIKDVVAPSDIIKTVVTWAE----NWKRGVKQKPLLFAGPPGVGKTSLALA 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A+ G + E + W G F E + G S G+
Sbjct: 58 LANTYGWEVVELNASDQRNWSVIYRIVGEG-----------AFNETLSDEGDFLSSREGK 106
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K ++++D++ + + F + +L R+ P ++ E
Sbjct: 107 LK---LIVLDEVDNISKKEDFGGESALIKILKRNPPQPMILIANEPYNLSP--------- 154
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
EL++++ R+ +T + + L +I + E + + + +A +GGD+R AI
Sbjct: 155 ELRNLVTMVNFRR-----LTRDQVVKVLERIAKLEGIEIDKKALYAIADNAGGDLRAAIN 209
Query: 378 SLQ 380
LQ
Sbjct: 210 DLQ 212
>gi|384501081|gb|EIE91572.1| hypothetical protein RO3G_16283 [Rhizopus delemar RA 99-880]
Length = 343
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 50/246 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + V + +KD N L++TG G+GKT ++ +
Sbjct: 26 WVEKYRPLYLKDIVGNEEAVSRLMTI-------AKDGNMPN-LILTGMPGIGKTTSIVCL 77
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIP-G 256
A + Y+ LE + D + + RI+ + ++P G
Sbjct: 78 AHEMLGASYK----------------DAVLELNASDDRGIDVIRSRIKTFAQKKVTLPPG 121
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
K I+++D+ G A + LR+ + + +T A C +++ +
Sbjct: 122 MHK---IIILDEADSMTG-GAQQALRRTMEIYSNTTRFALA-----CNQSNKI------I 166
Query: 317 EELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +QS R L +TN + + L +IC+ E+ + + E ++ + + GD+RQ
Sbjct: 167 EPIQS-------RTAVLRYTKLTNEEVLKRLLEICQMEKVNYNDEGLEALIFTADGDMRQ 219
Query: 375 AITSLQ 380
AI +LQ
Sbjct: 220 AINNLQ 225
>gi|114668257|ref|XP_511388.2| PREDICTED: ATPase family AAA domain-containing protein 5 [Pan
troglodytes]
Length = 1844
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1042 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1101
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|158520559|ref|YP_001528429.1| DNA polymerase III subunits gamma and tau [Desulfococcus oleovorans
Hxd3]
gi|158509385|gb|ABW66352.1| DNA polymerase III, subunits gamma and tau [Desulfococcus
oleovorans Hxd3]
Length = 570
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 60/270 (22%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+ A KY+P++ EE+ Q ++V + + + ++ TG G GKT R
Sbjct: 5 VLARKYRPQTFEEVVEQ----QQVTRTLTNAIASGR---VAHAILFTGPRGTGKTTIARI 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS--KLDEFE------NFVERIRRYGS 249
+A + + TPTP C++ LE S D FE N V+++R
Sbjct: 58 LAKAMNCE--KGPTPTPCCA------CRSCLEIASGNATDVFEIDGASNNSVDQVRELRG 109
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCL---------LLLVRSTHIPTAVVL 300
+P S I +ID++ + +G AF L + L H +L
Sbjct: 110 NVKFMPAHSPYK-IYIIDEVHMLSG-PAFNALLKTLEEPPAHVMFFFATTEPHKIPVTIL 167
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
+ C + D SF V ++P+ L +C +E + +
Sbjct: 168 SRCQRHD------LSF--------------VGIDPLVA-----HLETLCEKENIPIEKKS 202
Query: 361 IDLVAQASGGDIRQAITSL-QFSSLKQDPM 389
++L+A +GG +R +++ L Q S Q P+
Sbjct: 203 LELIAHEAGGSVRDSLSLLDQVMSSAQGPV 232
>gi|410254730|gb|JAA15332.1| ATPase family, AAA domain containing 5 [Pan troglodytes]
Length = 1844
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1042 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1101
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|219852692|ref|YP_002467124.1| replication factor C small subunit [Methanosphaerula palustris
E1-9c]
gi|219546951|gb|ACL17401.1| Replication factor C [Methanosphaerula palustris E1-9c]
Length = 326
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 57/254 (22%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W E+Y+P L ++ Q + E + ++ + R S L+ TG AG+GKT
Sbjct: 8 IWIERYRPTRLADIVGQDEITERLISYVKGR--------SLPHLLFTGSAGIGKTTAAVA 59
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A + + ++E + + G++ +I+++ TSP E
Sbjct: 60 LAREFFGEAWHIN------FREMNASDERGIDVVRN---------QIKQFARTSPLEGAE 104
Query: 258 SKSSAILLID--DLPVTNGRTAFERL-----RQCLLLLVRSTHIPTAVVLTECGKADSVD 310
K IL +D D T+ + A R R C +L S + + ++ D +
Sbjct: 105 FK---ILFLDEADALTTDAQAALRRTMETYSRGCRFIL--SCNYSSKII-------DPIQ 152
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
S + P+T +I + KI +E +++ + I+ + + G
Sbjct: 153 SRCAIYR---------------FRPLTPEAISEEIGKIAGKEGITVTPDAIEAIVYIAQG 197
Query: 371 DIRQAITSLQFSSL 384
D+R+AI +LQ +S+
Sbjct: 198 DMRKAINALQGASI 211
>gi|154276822|ref|XP_001539256.1| activator 1 37 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150414329|gb|EDN09694.1| activator 1 37 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 354
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 46/254 (18%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A A + + W EKY+P L+++ + +E ++ R G+ ++I+G G
Sbjct: 20 AGAPADYELPWVEKYRPVFLDDIVGNTETIERLK--IIARNGNMPH------VIISGMPG 71
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRY 247
+GKT ++ +A + Y+ + LE + + + V RI+ +
Sbjct: 72 IGKTTSILCLARQMLGNSYK----------------EAVLELNASDERGIDVVRNRIKGF 115
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
++P + + ++L + +T+G A + LR+ + + +T A C +++
Sbjct: 116 AQKKVTLP-QGRHKLVILDEADSMTSG--AQQALRRTMEIYSTTTRFAFA-----CNQSN 167
Query: 308 SVDSTAQSFEELQS-ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ E LQS + AR +T+G I + L++IC E+ S + ++ +
Sbjct: 168 KI------IEPLQSRCAILRYAR------LTDGQILKRLTQICEAEKVKYSEDGLEALIF 215
Query: 367 ASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 216 SAEGDMRQAINNLQ 229
>gi|444721021|gb|ELW61778.1| ATPase family AAA domain-containing protein 5 [Tupaia chinensis]
Length = 1299
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER--------- 168
DS+ S LW EKY+P++ EL ++++ +W EER
Sbjct: 617 DSSKDSGIEDMLWTEKYQPQNASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGRRDE 676
Query: 169 ----LGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 677 KQEDLSDSIDFKGSSDDEEGRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 729
>gi|392331829|ref|XP_001080963.3| PREDICTED: ATPase family AAA domain-containing protein 5 isoform 1
[Rattus norvegicus]
gi|392351410|ref|XP_220750.6| PREDICTED: ATPase family AAA domain-containing protein 5 isoform 2
[Rattus norvegicus]
Length = 1834
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF--------------------- 165
D + S + LW EKY+P++ EL ++++ +W
Sbjct: 1036 DPSKESGTEDMLWTEKYQPQNSNELVGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1095
Query: 166 -EERLGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
EE L D D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1096 KEEDLSDGTDFKGSSDDEEYRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1148
>gi|433637069|ref|YP_007282829.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
gi|433288873|gb|AGB14696.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
Length = 329
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 49/270 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+W EKY+P SL+++ V +R + E +D L+ G AGVGKTA+
Sbjct: 17 IWIEKYRPESLDDVKGHENIVPRLRKYVE------QDDLPH--LMFAGPAGVGKTASAGA 68
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIPG 256
IA LY D W+E+ LE + + + V +RI+ + +S G
Sbjct: 69 IARE----LYGED------WREHF------LELNASDERGIDVVRDRIKNFARSS---FG 109
Query: 257 ESKSSAILLID-DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
K I L + D ++ ++A R + +H T +L S + ++Q
Sbjct: 110 GVKYRIIFLDEADALTSDAQSALRRTMEQF------SH-NTRFIL-------SCNYSSQI 155
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ +QS +++ +I+ +I E SL+ + +D + A+ GD+R+A
Sbjct: 156 IDPIQSRCA-----VFRFTELSDEAIEAQTREIAETEGISLTDDGVDALVYAAAGDMRKA 210
Query: 376 ITSLQFSSLKQDPMLNLSL-SISKPNFPEE 404
I LQ +++ + + ++ +I+ PEE
Sbjct: 211 INGLQAAAVMGEEVDEAAVFAITSTARPEE 240
>gi|61680955|pdb|1SXJ|A Chain A, Crystal Structure Of The Eukaryotic Clamp Loader
(Replication Factor C, Rfc) Bound To The Dna Sliding
Clamp (Proliferating Cell Nuclear Antigen, Pcna)
Length = 516
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 39/257 (15%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVIT 184
++ +LW KY P +L+++ + V +++ W K+ F ++
Sbjct: 24 ASDKLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLY 83
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G G+GKT +A LG + E + K L+ S + F
Sbjct: 84 GPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYF------- 136
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTE 302
++ + ++ G+ ++++D++ +G R +L Q R T P ++ E
Sbjct: 137 -KHNEEAQNLNGK---HFVIIMDEVDGMSGGDRGGVGQLAQ----FCRKTSTPLILICNE 188
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
+ +D R+ N SIK L I +E++ L ID
Sbjct: 189 --------RNLPKMRPFDRVCLDIQFRRPDAN-----SIKSRLMTIAIREKFKLDPNVID 235
Query: 363 LVAQASGGDIRQAITSL 379
+ Q + GDIRQ I L
Sbjct: 236 RLIQTTRGDIRQVINLL 252
>gi|15920689|ref|NP_376358.1| replication factor C large subunit [Sulfolobus tokodaii str. 7]
Length = 413
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 40/217 (18%)
Query: 164 WFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHN 223
W E L K K + +++ G GVGKT +A L+E +
Sbjct: 3 WIESWL---KGKPNYKAVLLYGPPGVGKTTLAEALARDYKLELFEMNASD---------- 49
Query: 224 CKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ 283
+ L++ ER S + +I G ++L+D++ N R +
Sbjct: 50 -------SRNLNDIRTMAER----ASITGTIFG--IKGKLILLDEVDGLNARADAGAI-D 95
Query: 284 CLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKR 343
+L L+ T P ++LT + D S L++ + + L +T +KR
Sbjct: 96 AILELINKTKYP--IILT------ANDPWDPSLRPLRN-----AVKMIELKRLTKYPLKR 142
Query: 344 TLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQ 380
L KIC E+ + E +D + + S GD R AI LQ
Sbjct: 143 ILKKICEAEKITCEDEALDFIIEQSEGDARYAINMLQ 179
>gi|332260726|ref|XP_003279432.1| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing
protein 5 [Nomascus leucogenys]
Length = 1844
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1042 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1101
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KQEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|45185248|ref|NP_982965.1| ABR019Cp [Ashbya gossypii ATCC 10895]
gi|44980906|gb|AAS50789.1| ABR019Cp [Ashbya gossypii ATCC 10895]
gi|374106168|gb|AEY95078.1| FABR019Cp [Ashbya gossypii FDAG1]
Length = 730
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 43/294 (14%)
Query: 117 RFEGLVNPDHDSASASSST-QQLWAEKYKPRSLEEL----AVQRKKVEEVRAW----FEE 167
R EG +A A Q LWAEK++P+ +L + RK + +R W F E
Sbjct: 97 RIEGAAEGAQRAARAPGRVPQALWAEKWRPQRFVDLVGNESNNRKVMRWLRQWSALVFGE 156
Query: 168 RLG-------------DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEW---DT 211
L D + +L++ G G+GKT+ +A G + E D
Sbjct: 157 ALPGRASANAAAEQPEDPLQRPQKRILLLHGPPGIGKTSVAHVLARQAGYAVMELNASDE 216
Query: 212 PTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPV 271
T +E + NC + S+ + I G +++ I + D+
Sbjct: 217 RGGTRLREKVRNCLFNDTFNSQP------------VCLVADEIDGSAENGLIRTLVDIVN 264
Query: 272 TNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARK 330
+ R E L R R+ H + VL A + A++ E+L+ +
Sbjct: 265 ADARATSELLGRLEHGKRKRARHKYSGKVLVRPIVAICNNVYARALEDLRP-----HCQI 319
Query: 331 VALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSL 384
VA P ++ L +C +E + + +A+ S GDIR A+ +LQF S+
Sbjct: 320 VAFRPPGELALLERLELVCEKEGVPADKKTLKQMAELSQGDIRNALNNLQFMSV 373
>gi|444323297|ref|XP_004182289.1| hypothetical protein TBLA_0I01110 [Tetrapisispora blattae CBS 6284]
gi|387515336|emb|CCH62770.1| hypothetical protein TBLA_0I01110 [Tetrapisispora blattae CBS 6284]
Length = 676
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 46/272 (16%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELA----VQRKKVEEVRAW----FEERLGDSKDK 175
P HD QLW EK++P +L R+ + +R W F+ + +
Sbjct: 65 PRHD---------QLWVEKWRPHRFIDLVGNEKFNRRLLTWLRQWSSVVFQSKDTEPSID 115
Query: 176 F----STNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT 231
F +L+I G G+GKT+ +A LG + E + Q+ N L +
Sbjct: 116 FLNRPVKKILLIHGPPGIGKTSIAHIMAKQLGYSIVEINASNERNTQQLKLNLTNSLFHD 175
Query: 232 SKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS 291
+ F N I + I G S I L+ ++ ++ R R +
Sbjct: 176 ---NLFSNPTCLI------ADEIDGAQDSGLIKLLLEILHSDKRATLTRKNS------KK 220
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
+ ++ C S S E L+ RK P+ + I+R L I ++
Sbjct: 221 NKLLKRPIVAICNNIYS-----HSLERLKPFCEIIPLRK----PLDSAIIER-LQLIAQK 270
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
E SLS + + + +S GDIR I +LQF++
Sbjct: 271 EHLSLSLQALKDIIISSQGDIRNCINNLQFNA 302
>gi|149053590|gb|EDM05407.1| similar to novel protein (predicted) [Rattus norvegicus]
Length = 1757
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF--------------------- 165
D + S + LW EKY+P++ EL ++++ +W
Sbjct: 1036 DPSKESGTEDMLWTEKYQPQNSNELVGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1095
Query: 166 -EERLGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
EE L D D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1096 KEEDLSDGTDFKGSSDDEEYRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1148
>gi|354546576|emb|CCE43308.1| hypothetical protein CPAR2_209530 [Candida parapsilosis]
Length = 850
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 97/258 (37%), Gaps = 33/258 (12%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--------GDSKDKFSTNVLVITGQAG 188
+LW +K+ P+ +L + +V+++R+W E G S + S +I+G G
Sbjct: 301 KLWTDKHAPKDFNQLCGNKGQVQKLRSWLEHWFENKAKNFPGGSDNPSSYRAALISGPPG 360
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
+GKT +A+ LG + E + N K+ L TS + F++ + +
Sbjct: 361 IGKTTAAHLVANSLGFDVLEKNASDVRSKSLLNANIKSVLNNTSVIGFFKHRDDEQQ--- 417
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
S S I LI D V + L R T++P ++ C
Sbjct: 418 --------SSNSRKICLIMD-EVDGMSSGDHGGAGALSQFCRITNMPMILI---CN---- 461
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
D + + D R+ T +K L I +E L I + QA+
Sbjct: 462 -DKSLPKMRTFDRVTYDLPFRRP-----TENEVKSRLMTIALREGIKLDPNIIGQLVQAT 515
Query: 369 GGDIRQAITSLQFSSLKQ 386
DIRQ I L S Q
Sbjct: 516 SNDIRQMINLLSTVSKTQ 533
>gi|302348723|ref|YP_003816361.1| Replication factor C small subunit [Acidilobus saccharovorans
345-15]
gi|302329135|gb|ADL19330.1| Replication factor C small subunit [Acidilobus saccharovorans
345-15]
Length = 329
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 94/251 (37%), Gaps = 53/251 (21%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+PRSL+E+ Q++ VE + + E+ + L+ G G GKT
Sbjct: 9 LWTEKYRPRSLKEIVNQKEIVERLSKFVAEK--------NMPHLLFAGPPGTGKTTAAHA 60
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+A L Y +YM E +D V+ R T P IP +
Sbjct: 61 LAHDLYGDNY----------TQYMLELNASDE--RGIDTIREKVKEFAR-SKTPPDIPFK 107
Query: 258 SKSSAILLID--DLPVTNGRTAFERLRQCL---LLLVRSTHIPTAVVLTECGKADSVDST 312
I+L+D D + + A RL + + + + P+ ++ D + S
Sbjct: 108 -----IVLLDEADNMTADAQQALRRLMELYSANTRFILAANFPSKII-------DPIQSR 155
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
F P+ + L I +E + ++ + S GD+
Sbjct: 156 CAFFR---------------FTPLGKDDVVGRLRYIAEKENVKYDEDALEAIYDISEGDM 200
Query: 373 RQAITSLQFSS 383
R+AI LQ ++
Sbjct: 201 RKAINILQTAA 211
>gi|47213597|emb|CAG07263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 350
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 50/270 (18%)
Query: 115 PSRFEGLVNPDHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSK 173
P++ +G P S +++ T +L W EKY+P L+++ + V + + E G+
Sbjct: 10 PTKGDGEAGP---SGRSTAGTYELPWVEKYRPLKLDQIVGNEETVSRLEVFARE--GNVP 64
Query: 174 DKFSTNVLVITGQAGVGKTATVRQIA-SHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
+ ++I G G GKT ++ +A + LGA + ++ + +
Sbjct: 65 N------IIIAGPPGTGKTTSILCLARALLGASM-----------KDAVLELNASNDRHR 107
Query: 233 KLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRST 292
+D N +I+ + ++P + + I+L + +T+G A + LR+ + + ++T
Sbjct: 108 GIDVVRN---KIKMFAQQKVTLP-KGRHKIIILDEADSMTDG--AQQALRRIMEIYSKTT 161
Query: 293 HIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVAL--NPITNGSIKRTLSKICR 350
A C +D + E +QS R L + +T+G I L +
Sbjct: 162 RFALA-----CNASDKI------IEPIQS-------RCAVLRYSKLTDGQILARLQDVVE 203
Query: 351 QEQYSLSTEQIDLVAQASGGDIRQAITSLQ 380
+E S+S + ++ V + GD+RQA+ +LQ
Sbjct: 204 KEGLSVSEDGLEAVIFTAQGDMRQALNNLQ 233
>gi|395748791|ref|XP_003778829.1| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing
protein 5 [Pongo abelii]
Length = 1835
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW +KY+P++ EL ++++ +W EER
Sbjct: 1046 DSSKDSGTEDMLWTDKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1105
Query: 170 ------------GDSKDKFS--TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ S N ++ITG GVGKTA V A LG +++E
Sbjct: 1106 KHEDFSGGIDFKGSSDDEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1158
>gi|167390687|ref|XP_001739454.1| replication factor C large subunit [Entamoeba dispar SAW760]
gi|165896833|gb|EDR24155.1| replication factor C large subunit, putative [Entamoeba dispar
SAW760]
Length = 576
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 45/257 (17%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW---FEERLGDSKDKFSTNVLVIT 184
S + +S + +W EKY+P++ +L + ++ + W +E+ + D + +++
Sbjct: 264 STNVINSNEIIWTEKYRPQTKSDLIGNKNQIAKFYTWINKWEKVIPDRR------AVLLA 317
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G GVGKT + + LG E++ T E ++RI
Sbjct: 318 GAPGVGKTTVSKIVGKTLGFNPIEFNASD-----------------TRNKSSIELAIKRI 360
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTEC 303
G SI G ++++D++ +G ++ +R L+ ++ T P + C
Sbjct: 361 FLNGQI--SIDGSKNKKPLIIMDEV---DGMSSGDRGGITELVKYIKETEQPIVCI---C 412
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
D + + L ++ K+++ +T L IC +E +S E +
Sbjct: 413 N-----DVMDKKMQPLINVCETINFSKISVLELT-----ERLKYICDKEGVQVSDENLSQ 462
Query: 364 VAQASGGDIRQAITSLQ 380
+A + GD+R I LQ
Sbjct: 463 IASKAHGDVRYGINMLQ 479
>gi|449299008|gb|EMC95022.1| hypothetical protein BAUCODRAFT_35017 [Baudoinia compniacensis UAMH
10762]
Length = 782
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 37/258 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFE-----ERLG---DSKDKFSTN-VLVITGQA 187
+LW +Y P+ L ++ + +V++++ W +R+G D T+ ++I G
Sbjct: 281 RLWTVRYAPQQLSQICGNKAQVDKLQRWLRNFPKSQRVGFKMPGPDGSGTHRAVMIHGPP 340
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT A+HL A+L +D I + + ++ + L + + +
Sbjct: 341 GIGKTT-----AAHLVAKLEGYD-----IVESNASDTRSKKLVDTGLKGVLSTTSLMGYF 390
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV-RSTHIPTAVVLTECGKA 306
S + S+ SK +L++D++ +G +A +R L V + T IP ++
Sbjct: 391 ASGTDSVEA-SKKKLVLIMDEV---DGMSAGDRGGVGALAAVCKKTQIPMILICN----- 441
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D + + D R+ P T+ I+ +S I +E + I+ + +
Sbjct: 442 ---DRKLPKMKPFDFVTYDLAFRR----PTTD-QIRSRISTIAFREGLKMPANVINALIE 493
Query: 367 ASGGDIRQAITSLQFSSL 384
SG DIRQ + + + L
Sbjct: 494 GSGADIRQVVNMISTAKL 511
>gi|322695637|gb|EFY87442.1| putative replication factor C protein [Metarhizium acridum CQMa
102]
Length = 1062
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 104/264 (39%), Gaps = 41/264 (15%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAW-----------FEERLGDSKDKFSTNVLVITGQ 186
L KY P L + + +VE ++ W F+ R D ++I+G
Sbjct: 487 LLTSKYAPTQLSHICGNKAQVERIQTWLRNWPKAKKYNFQRRGADGLG--GERAIIISGP 544
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT A+HL A+L +D + + + ++ + + + N +
Sbjct: 545 PGIGKTT-----AAHLAAKLEGYD-----VLESNASDVRSKKLVENGVSDVMNNTSLLGY 594
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECGK 305
+ ++ +K +L++D++ +G +A +R L + T +P ++ E
Sbjct: 595 FAGDGKTV-DAAKKKIVLVMDEV---DGMSAGDRGGVGALAKFCKKTEVPLILICNE--- 647
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ +++ D A + N T ++ + IC +E L +D +
Sbjct: 648 --------RRLPKMKPF--DHVAFDIRFNRPTVDQVRSRIMTICHREGLKLPPAVVDALI 697
Query: 366 QASGGDIRQAITSLQFSSLKQDPM 389
+ S DIRQ I + + L Q M
Sbjct: 698 EGSNKDIRQIINMISTAKLDQTTM 721
>gi|363756402|ref|XP_003648417.1| hypothetical protein Ecym_8322 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891617|gb|AET41600.1| Hypothetical protein Ecym_8322 [Eremothecium cymbalariae
DBVPG#7215]
Length = 806
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 98/254 (38%), Gaps = 39/254 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P SL+++ + V +++ W + ++ F T ++ G
Sbjct: 214 KLWTVKYAPTSLQQICGNKGAVNKLKNWLTNWAINQQNGFKTPGKDGTGIYRAAMLYGPP 273
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A LG + E + K L+ TS + F+N ++
Sbjct: 274 GIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNSGVKNALDNTSVVGFFKNQDANVK-- 331
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
++++ ++++D++ +G R ++ Q R T P ++ E
Sbjct: 332 ---------DNRNKFVIIMDEVDGMSGGDRGGVGQMAQ----FCRKTSSPLILICNE--- 375
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ ++ D R+ S+K L I +E + L ID +
Sbjct: 376 -----RSLPKMRPFDRVVCDIQFRRPDAQ-----SMKARLMTIAVREGFKLDPTVIDQLV 425
Query: 366 QASGGDIRQAITSL 379
A+ GDIRQ I L
Sbjct: 426 AATRGDIRQIINLL 439
>gi|452824090|gb|EME31095.1| replication factor C subunit 1 [Galdieria sulphuraria]
Length = 758
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 180/424 (42%), Gaps = 86/424 (20%)
Query: 124 PDHDSASASSST-QQLWAEKYKPRSLEELAVQRKKVEEVRAW--------FEERLGDSKD 174
P D+ A S+T +LW KY P L EL ++ ++ W + +K
Sbjct: 198 PTIDNNIAQSATCSELWTYKYAPCDLSELCANPGAIKSLKEWLVNWKAASLSQEGSKNKG 257
Query: 175 KFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL 234
K S ++++G G+GKT ++ LG E++ + T + + + + L
Sbjct: 258 KSSPKAVLLSGPPGIGKTTAALLVSKELGYFPMEFNA-SDTRNRAIVSSTVGSVINNQTL 316
Query: 235 DEFENFVERIRRYGSTSPSIPGESK-SSAILLIDDLPVTNGRTAFERLR-QCLLLLVRST 292
++F G+ K +S+++++D++ +G +A +R Q L+ L++ T
Sbjct: 317 NQF------------------GKDKTTSSVIIMDEV---DGMSAGDRGGIQELIQLIKKT 355
Query: 293 HIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE 352
+P + D ++ L + + R+ P+ + ++ L +IC++E
Sbjct: 356 SVPIVCICN--------DDSSVKVRSLANYCLKLKWRR----PLAS-QLRSRLLEICKKE 402
Query: 353 QY-SLSTEQIDLVAQASGGDIRQAITSLQ-FSSLKQDPMLNLSLSISKPNFPEEKADGHG 410
+ ++ T+ ++ + ++ GD+RQ + LQ + S + NL+ S K DG
Sbjct: 403 GFENVDTQTLEKIVESCHGDMRQILNLLQSWRSHSR----NLTYS---DVLERMKQDGK- 454
Query: 411 GFSIQFGRDETLSLFHAL------GKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDA 464
E +S+F + G++L R DN MD D +PL M A
Sbjct: 455 -------TYEEMSIFELVKSLFSPGEWLS--RRLDNYF-MDPDL---------MPL-MVA 494
Query: 465 PEKVLSQAHGQARPVLD----FLHENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLL 520
++S+ + +++ + + D++R+ +NL+ +Q L Y L+Q
Sbjct: 495 ENYIISREASDLKKLVEASTSIAEGDIFNDLIRRQQAWNLMPVQALFSGIYPGQLLQGPF 554
Query: 521 GGML 524
G M+
Sbjct: 555 GDMI 558
>gi|410980458|ref|XP_003996594.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Felis
catus]
Length = 1885
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER--------- 168
DS S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1081 DSCKDSGTEDMLWTEKYQPQNSSELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKKDE 1140
Query: 169 ----LGDSKD-KFST---------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1141 KQEDLSDSIDFKGSSDDEEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1194
>gi|225459599|ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
gi|302141794|emb|CBI18997.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 44/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEV-RAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EKY+P+SL ++A R V+ + R E RL L++ G G GKT+T+
Sbjct: 39 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPH---------LLLYGPPGTGKTSTILA 89
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIPG 256
+A L + E HN LE + D + V ++I+ + ST G
Sbjct: 90 VARKL--------------YGEQFHNMI--LELNASDDRGIDVVRQQIQDFASTQSFSFG 133
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
S ++L+D+ F LR+ + ++T A++ C + + QS
Sbjct: 134 AKSSVKLVLLDEADAMTKDAQFA-LRRVIEKYTKNTRF--ALI---CNHVNKIIPALQS- 186
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+ P+ + L + E+ +S + + + S GD+R+A+
Sbjct: 187 ----------RCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKAL 236
Query: 377 TSLQ 380
LQ
Sbjct: 237 NILQ 240
>gi|20093445|ref|NP_613292.1| replication factor C large subunit [Methanopyrus kandleri AV19]
gi|42559499|sp|Q8TZC5.1|RFCL_METKA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|19886264|gb|AAM01222.1| Replication factor C (ATPase involved in DNA replication)
[Methanopyrus kandleri AV19]
Length = 510
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 112/305 (36%), Gaps = 61/305 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PRSL+EL Q + +E+ AW E S + +++ G G GKT+ +
Sbjct: 4 WVEKYRPRSLKELVNQDEAKKELAAWANEWARGSIPE--PRAVLLHGPPGTGKTSAAYAL 61
Query: 199 ASHLGARLYEW---DTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
A G + E D T + ++ + T + + R G +
Sbjct: 62 AHDFGWDVIELNASDKRTRNVIEKIVGGASTS----------RSLLRMTREAGGDYEHVE 111
Query: 256 GESKSSAILL-----IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
G S +L+ ID G TA R VR P +V
Sbjct: 112 GHSDRVLVLVDEVDGIDPREDRGGVTALTR-------AVRQARNPMVLV----------- 153
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
A L L DA R + + I L +IC +E + +A+ + G
Sbjct: 154 --ANDPWVLPKSLRDA-VRMIEFRRLRVNDIVEALRRICEREGIEYEEVALRRIAKRARG 210
Query: 371 DIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHG-GFSIQFGRDETLSLFHALG 429
D+R AI L+ ++++P D G+ RD+ +++F ALG
Sbjct: 211 DLRAAINDLE--------------ALARPTGRVTSDDVEALGW-----RDKEITIFEALG 251
Query: 430 KFLHN 434
+ +
Sbjct: 252 RIFNK 256
>gi|366989649|ref|XP_003674592.1| hypothetical protein NCAS_0B01320 [Naumovozyma castellii CBS 4309]
gi|342300456|emb|CCC68216.1| hypothetical protein NCAS_0B01320 [Naumovozyma castellii CBS 4309]
Length = 871
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 97/254 (38%), Gaps = 39/254 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STNVL---VITGQA 187
+LW KY P +L+++ + V ++++W + K+KF T V ++ G
Sbjct: 306 KLWTVKYAPTNLQQICGNKSSVAKLKSWLSNWEINKKNKFKNAGRDGTGVFRTAMLYGPP 365
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A LG + E + K L+ S + F++
Sbjct: 366 GIGKTTAAHLVAKELGYDILEQNASDVRSKSLLNAGVKNALDNMSVVGFFKH-------- 417
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ E+ ++++D++ +G R +L Q R T P ++ E
Sbjct: 418 ---KDDLADENGKRFVIIMDEVDGMSGGDRGGVGQLAQ----FCRKTSTPMILICNE--- 467
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ +D R+ N S+K L I +E + L ID +
Sbjct: 468 -----RNLPKMRPFDRVCLDLQFRRPDAN-----SVKSRLMTIAIREGFKLDPNVIDKLI 517
Query: 366 QASGGDIRQAITSL 379
Q + GDIRQ I L
Sbjct: 518 QTTRGDIRQIINLL 531
>gi|407399789|gb|EKF28431.1| replication factor C, subunit 4, putative [Trypanosoma cruzi
marinkellei]
Length = 340
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 45/257 (17%)
Query: 135 TQQL--WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
+QQL W EKY+P+S+E++ V +R +E G+ + L++ G G GKT
Sbjct: 2 SQQLVPWVEKYRPKSMEDIVGNADAVSRLRVISKE--GNLPN------LLLCGPPGTGKT 53
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTS 251
+V +A L L + D T +E + LE + D + V E+I+ + T
Sbjct: 54 TSVLCLARTL---LSDQDGGDTTALKEAV------LELNASDDRGLDVVREKIKLFAQTK 104
Query: 252 PSIPGESKSSA--------ILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC 303
++P + S+ I+++D+ A + LR+ + L +T A C
Sbjct: 105 KTLPQKVNESSQQKMNLHKIVILDEADSMTP-AAQQALRRTMELHSSTTRFAFA-----C 158
Query: 304 GKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
+ + E +QS V +T+ I + L+ I +QE + + + ++
Sbjct: 159 NNSHKI------IEPIQS-----RCAVVRFKKLTHADILKRLTYIIQQENVTYTDDGLEA 207
Query: 364 VAQASGGDIRQAITSLQ 380
+ + GD+R A+ +LQ
Sbjct: 208 LLYLAEGDLRSAVNALQ 224
>gi|392574887|gb|EIW68022.1| hypothetical protein TREMEDRAFT_32699, partial [Tremella
mesenterica DSM 1558]
Length = 720
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 112/273 (41%), Gaps = 35/273 (12%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST-------- 178
++A A + QLW KY P++ ++L + + + W ++ + K F
Sbjct: 145 EAAKAIPISSQLWTTKYAPQTAKDLCGNKAPIGRLLDWLKDWDKNFKSGFKKPGKEGLGI 204
Query: 179 -NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
++I+G G+GKT + +A G E + + H+ T ++ S LD F
Sbjct: 205 FRAVLISGPPGIGKTTSAHLMAKEAGYNPIELNASDARSKKLIEHH--TNIDNAS-LDGF 261
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPT 296
+ G+ + + + S L++D++ +G +A +R L L++ T IP
Sbjct: 262 ------FQGAGAKTTVVDMKVDSKTCLIMDEV---DGMSAGDRGGVGALNALIKKTRIPM 312
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ C D + Q + L + ++ N ++ + I +E+ +
Sbjct: 313 ILI---CN-----DKSLQKMKPLINTTYGMPFKRPGPN-----EVRSRIMSILYKEKLKI 359
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
T +D + Q + DIRQ + L L + M
Sbjct: 360 PTNVVDQLVQGANSDIRQVLNMLSTFKLGKSEM 392
>gi|255323655|ref|ZP_05364785.1| ATPase, AAA family [Campylobacter showae RM3277]
gi|255299369|gb|EET78656.1| ATPase, AAA family [Campylobacter showae RM3277]
Length = 394
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 121/298 (40%), Gaps = 62/298 (20%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
Q +A K++PRSL+E+ QR+ V + + E + K ++ G AG GKT+ R
Sbjct: 2 QNFALKFRPRSLDEICGQRELVGVFKKFIENK------KIPHSIFY--GPAGCGKTSFAR 53
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A + YE+D I +E+ K + + L + F++ I R T
Sbjct: 54 VVARSMEYDFYEFDGGNLKI-EEFRKILKN---HENALSKPLFFIDEIHRLSKT------ 103
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ A+L +P+ N R A ++ ST P + + + S + F
Sbjct: 104 --QQEALL----IPMENYRAA---------IIGASTENPYITL------SSGIRSRSMLF 142
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E P+ + ++ L ++ + ++ +S E + ++SGGD R +
Sbjct: 143 E---------------FKPLASEDFEKLLERVRDEVKFDISDEAKAYLVKSSGGDARGLL 187
Query: 377 TSLQFSSLKQDPMLNLSLSISKPNFPEEKA---DGHGGFSIQF-----GRDETLSLFH 426
L+F+ + + +L + N E D H G + F G DE +++
Sbjct: 188 NLLEFAVSLDEKITLENLKTLRANAVSEGVSDDDVHYGLASAFIKSLRGSDENAVMYY 245
>gi|389638292|ref|XP_003716779.1| replication factor C subunit 1 [Magnaporthe oryzae 70-15]
gi|351642598|gb|EHA50460.1| replication factor C subunit 1 [Magnaporthe oryzae 70-15]
gi|440465129|gb|ELQ34469.1| replication factor C subunit 1 [Magnaporthe oryzae Y34]
gi|440488577|gb|ELQ68294.1| replication factor C subunit 1 [Magnaporthe oryzae P131]
Length = 1084
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 50/267 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE----RLGDSKDKFSTNV-----LVITGQA 187
QLW KY P +L + + +VE+++ W E R D K + + + ++I+G
Sbjct: 485 QLWTTKYAPTALNHICGNKAQVEKIKNWLENWPKSRKYDFKKRGADGLGGERAIIISGPP 544
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG-LEYTSKLDEFENFVE 242
G+GKT A+H+ A+L +D + T ++ + N + + TS L F +
Sbjct: 545 GIGKT-----TAAHMAAKLAGYDVLESNASDTRSKKLVENGVSDVINNTSLLGYFSGDGK 599
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLT 301
++ +++ + +L++D++ +G +A +R L + T +P ++
Sbjct: 600 KV-----------DQARKNIVLIMDEV---DGMSAGDRGGVGALAKFCKKTEVPLILICN 645
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS-LSTEQ 360
E + +++ D A + N T I+ + IC +E + +
Sbjct: 646 E-----------RRLPKMKPF--DHVAFDIRFNRPTVDQIRSRIMTICHREGLGKMPPQV 692
Query: 361 IDLVAQASGGDIRQAITSLQFSSLKQD 387
ID + + DIRQ I + S+K D
Sbjct: 693 IDALIEGCNKDIRQIINMVH--SIKLD 717
>gi|448474345|ref|ZP_21602204.1| replication factor C large subunit [Halorubrum aidingense JCM
13560]
gi|445817652|gb|EMA67521.1| replication factor C large subunit [Halorubrum aidingense JCM
13560]
Length = 491
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 144/377 (38%), Gaps = 81/377 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEE----VRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K + R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFATWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++ E
Sbjct: 97 AGGGAAGGDTASRQLVILDEADNIHGN--YDRGGASAITELVKESGQPIVLIANE----- 149
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
F ++ L +A +++ ++ SI L +CR+E + + +A+
Sbjct: 150 --------FYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDVCRKEGIEFEPDALQRIAER 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D SI+ + + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATEGRD-------SIAVEDV------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHG-QARPVLDFL-HE 485
L L + + L Q A+ V + L ++ VL +A DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLTKWVE--NNVLDVYDPMEAVRAYDFLANA 295
Query: 486 NCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 296 DVWLGRVRATQNYSYWR 312
>gi|225554309|gb|EEH02609.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|240277074|gb|EER40584.1| activator 1 37 kDa subunit [Ajellomyces capsulatus H143]
gi|325095015|gb|EGC48325.1| activator 1 37 kDa subunit [Ajellomyces capsulatus H88]
Length = 354
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 46/254 (18%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A A + + W EKY+P L+++ + +E ++ R G+ ++I+G G
Sbjct: 20 AGAPADYELPWVEKYRPVFLDDIVGNTETIERLK--IIARNGNMPH------VIISGMPG 71
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRY 247
+GKT ++ +A + Y+ + LE + + + V RI+ +
Sbjct: 72 IGKTTSILCLARQMLGDSYK----------------EAVLELNASDERGIDVVRNRIKGF 115
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
++P + + ++L + +T+G A + LR+ + + +T A C +++
Sbjct: 116 AQKKVTLP-QGRHKLVILDEADSMTSG--AQQALRRTMEIYSTTTRFAFA-----CNQSN 167
Query: 308 SVDSTAQSFEELQS-ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ E LQS + AR +T+G I + L++IC E+ S + ++ +
Sbjct: 168 KI------IEPLQSRCAILRYAR------LTDGQILKRLTQICEAEKVKYSEDGLEALIF 215
Query: 367 ASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 216 SAEGDMRQAINNLQ 229
>gi|50949440|emb|CAH10412.1| hypothetical protein [Homo sapiens]
Length = 1224
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1042 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1101
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|357463515|ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
gi|355491087|gb|AES72290.1| Replication factor C subunit [Medicago truncatula]
Length = 355
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 44/245 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEV-RAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
LW EKY+P+SL+++A R V+ + R E RL L++ G G GKT+T+
Sbjct: 33 LWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPH---------LLLYGPPGTGKTSTIL 83
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIP 255
+A L Y HN LE + D + V ++I+ + ST
Sbjct: 84 AVARKLYGAQY--------------HNMI--LELNASDDRGIDVVRQQIQDFASTQSLSF 127
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
G S ++L+D+ F LR+ + +ST A++ C + + QS
Sbjct: 128 GVKPSVKLVLLDEADAMTKDAQFA-LRRVIEKYTKSTRF--ALI---CNHVNKIIPALQS 181
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ P+ + L + E+ + + + + S GD+R+A
Sbjct: 182 -----------RCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKA 230
Query: 376 ITSLQ 380
+ LQ
Sbjct: 231 LNILQ 235
>gi|321264352|ref|XP_003196893.1| sister chromatid cohesion-related protein [Cryptococcus gattii
WM276]
gi|317463371|gb|ADV25106.1| sister chromatid cohesion-related protein, putative [Cryptococcus
gattii WM276]
Length = 887
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 100/276 (36%), Gaps = 62/276 (22%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEE---------------RLGDSKD--KFSTN- 179
+W +KY+P+ +L + + EV +W +E R D+ D F+ +
Sbjct: 266 MWVDKYRPKRFTDLLGEDRVHREVMSWLKEWDKCVFKRQRTQAKKRPFDASDSKPFAVDP 325
Query: 180 -------VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
VL+++G G GKT +A H G R+ E + +Q + +E +
Sbjct: 326 LGRPHERVLLLSGPPGYGKTTLASVVAHHAGYRILEINASDDRSYQTVQTRIRNAIEAGT 385
Query: 233 KLDEFEN----FVERIRRYGSTSPSIPGESK--SSAILLIDDLPV-TNGRTAFERLRQCL 285
L V+ + G GES + I LI D P T + LR+ +
Sbjct: 386 SLGAEGKPTCVVVDEVDGAGG------GESGFIKALIKLIQDAPARRKSSTPAKLLRRPI 439
Query: 286 LLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTL 345
+ + + P L AR + S+ L
Sbjct: 440 ICICNDIYAPALRPLRPY------------------------ARIIRFRKPQAQSLVVRL 475
Query: 346 SKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
IC++E T ++ + + + GD+R + +LQF
Sbjct: 476 RDICQREGLQADTRSLNTLVEMTSGDVRSCLNTLQF 511
>gi|385804106|ref|YP_005840506.1| replication factor C large subunit [Haloquadratum walsbyi C23]
gi|339729598|emb|CCC40868.1| replication factor C large subunit [Haloquadratum walsbyi C23]
Length = 515
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W E+Y+P +L + +E W E S D +V V+ G GVGKT+ +
Sbjct: 4 WTERYRPTTLSAVRGNNAARDEFIEWAE-----SWDDHHESV-VLHGAPGVGKTSAAHAL 57
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
AS +G W+ N + TS D E R + + + + G +
Sbjct: 58 ASDMG-------------WETVELNASD--QRTS--DVIERLAGRAAKNATLAGAASGTT 100
Query: 259 KSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++++D+ N ++R +Q + L++ + P ++ E +
Sbjct: 101 STRQLIIMDE--ADNIHYQYDRGGKQAVTTLLKDANQPIVLIANE-------------YY 145
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
++ L +A A+ + I+ SI L I R+E + +A+ + GD+R AI
Sbjct: 146 DMSRGLRNA-AQDIEFRDISARSIVPVLRNILRKEDIEFEEAALKQIAEVNSGDLRAAIK 204
Query: 378 SLQ 380
LQ
Sbjct: 205 DLQ 207
>gi|334324610|ref|XP_001368308.2| PREDICTED: ATPase family AAA domain-containing protein 5 [Monodelphis
domestica]
Length = 1779
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 32/103 (31%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER-------------------- 168
LW EKY+P+ EL R ++++ +W EE+
Sbjct: 990 LWTEKYQPQDSSELIDNRIAIQKLHSWLKDWKRRAELEEKGNGKVRSDDKEQDLSFSMDF 1049
Query: 169 --LGDSKDKFS-TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
L D +D+ S N ++ITG GVGKTA V A LG +++E
Sbjct: 1050 KDLSDDEDESSLCNTVLITGPPGVGKTAAVYACAQELGFKIFE 1092
>gi|388583076|gb|EIM23379.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 331
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 37/249 (14%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
SS + + W EKY+PR++E++A Q + +++LG++ ++ G G GK
Sbjct: 2 SSESIKPWVEKYRPRTIEDVAAQDHTIR----VLKKQLGNANLPH----MLFYGPPGTGK 53
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T+T+ L +L+ D + E + + G+ ++ +NF ++ + STS
Sbjct: 54 TSTILA----LSRQLFGQDLVKSRVL-ELNASDERGINVVR--EKIKNFAKQAPK-ASTS 105
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
S+P I+++D+ + + A LR+ + +ST C + V
Sbjct: 106 ASVPAYK----IIILDEAD-SMTQDAQSALRRTMETYSKSTRF--------CLVCNYVTR 152
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+ V + K P+ K L I ++E L+ ID + + GD
Sbjct: 153 IIEP--------VASRCSKFRFKPLDESDSKARLEYIAQEENIPLNEGVIDALIDNTHGD 204
Query: 372 IRQAITSLQ 380
+RQAIT LQ
Sbjct: 205 LRQAITYLQ 213
>gi|303322344|ref|XP_003071165.1| activator 1 subunit, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240110864|gb|EER29020.1| activator 1 subunit, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 283
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 112/257 (43%), Gaps = 43/257 (16%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
++A A + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 NAAGAPPDYELPWVEKYRPVFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT ++ +A + +Y +E + E L + RI+
Sbjct: 70 PGIGKTTSILCLARQMLGDVY----------KEAVLELNASDERVRFLAGIDVVRNRIKG 119
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
+ ++P K ++L + +T+G A + LR+ + + +T A C ++
Sbjct: 120 FAQKKVTLP-PGKHKLVILDEADSMTSG--AQQALRRTMEIYSATTRFAFA-----CNQS 171
Query: 307 DSVDSTAQSFEELQSILVDAGARKVAL---NPITNGSIKRTLSKICRQEQYSLSTEQIDL 363
+ + E LQS + A+ + +T+ I + L +IC E S + I
Sbjct: 172 NKI------IEPLQS--------RCAILRYSRLTDAQIVKRLMQICEAEDVKHSDDGIAA 217
Query: 364 VAQASGGDIRQAITSLQ 380
+ ++ GD+RQAI +LQ
Sbjct: 218 LVFSAEGDMRQAINNLQ 234
>gi|352682669|ref|YP_004893193.1| replication factor C small subunit [Thermoproteus tenax Kra 1]
gi|350275468|emb|CCC82115.1| replication factor C small subunit [Thermoproteus tenax Kra 1]
Length = 321
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 47/251 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T W EKY+P+S E+ +EE++A RL + + L+ G G GKT T
Sbjct: 2 TDLFWFEKYRPKSFAEIV----DLEEIKA----RLAEFIKAGNMPHLLFYGPPGTGKTTT 53
Query: 195 VRQIASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSP 252
+A L G R W+E LE + + N + ER++ + T+P
Sbjct: 54 ALVLARELYGER-----------WRE------NTLELNASDERGINVIRERVKEFARTAP 96
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
+ G +L D ++ + A R+ + R + V G + + S
Sbjct: 97 A-GGAPFKLVVLDEADNMTSDAQQALRRIMEMYAATTRFVLLANYV----SGIIEPIQSR 151
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
F +P+ ++ L I QE ++ + ++ + + GD+
Sbjct: 152 CAVFR---------------FSPLPKDAVVARLRYIAEQEGLKVTQDALEAIFDFTQGDM 196
Query: 373 RQAITSLQFSS 383
R+AIT+LQ +S
Sbjct: 197 RRAITALQIAS 207
>gi|406607392|emb|CCH41183.1| Replication factor C subunit 1 [Wickerhamomyces ciferrii]
Length = 905
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 40/270 (14%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE---ERLGDSKDKFSTN---V 180
+S+ + +++LW +Y P ++ ++ + V+++++W E + G+ K + +
Sbjct: 376 NSSKLKTDSEKLWTVRYAPTNISQICGNKSSVQKLQSWLESWPSKFGNRKPQKGESELRA 435
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++I G G+GKT +A LG + E + + + + N G N
Sbjct: 436 VLIHGPPGIGKTTAAHLVAKSLGYDVLEKN--ASDVRSKGLLNSGVG-----------NI 482
Query: 241 VERIRRYGSTSPSIPGESKSSA--ILLIDDLPVTNGRTAFER--LRQCLLLLVRSTHIPT 296
+ G +P +++ A L++D++ +G + +R + Q L R+T +P
Sbjct: 483 LNNTSVMGYFNPEAHATAENGAKFCLIMDEV---DGMSGGDRGGVGQ-LASYCRTTQVPM 538
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ C D + + +D R+ + +K L I +E+ L
Sbjct: 539 ILI---CN-----DKSLPKMRPFDRVTIDLPFRRPSAR-----EMKSRLMTIALREKIKL 585
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
ID + QA+ DIRQ I L S Q
Sbjct: 586 DPNIIDQLVQATSNDIRQIINLLSTVSSTQ 615
>gi|71654812|ref|XP_816018.1| replication factor C, subunit 4 [Trypanosoma cruzi strain CL
Brener]
gi|70881118|gb|EAN94167.1| replication factor C, subunit 4, putative [Trypanosoma cruzi]
Length = 340
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 43/256 (16%)
Query: 135 TQQL--WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
+QQL W EKY+P+S+E++ V +R +E G+ + L++ G G GKT
Sbjct: 2 SQQLVPWVEKYRPKSMEDIVGNADAVSRLRVISKE--GNLPN------LLLCGPPGTGKT 53
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTS 251
+V +A L L + D T +E + LE + D + V E+I+ + T
Sbjct: 54 TSVLCLARTL---LSDQDGGDTTALKEAV------LELNASDDRGLDVVREKIKLFAQTK 104
Query: 252 PSIP---GESKSSAI----LLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
++P ES I ++I D + A + LR+ + L +T A C
Sbjct: 105 KTLPQKVNESSQQKINLHKIVILDEADSMTPAAQQALRRTMELHSSTTRFAFA-----CN 159
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
+ + E +QS V +T+ I + L+ I +QE + + + ++ +
Sbjct: 160 NSHKI------IEPIQS-----RCAVVRFKKLTHADILKRLTYIIQQENVTYTDDGLEAL 208
Query: 365 AQASGGDIRQAITSLQ 380
+ GD+R A+ +LQ
Sbjct: 209 LYLAEGDLRSAVNALQ 224
>gi|407033664|gb|EKE36933.1| activator 1 140 kda subunit, putative [Entamoeba nuttalli P19]
Length = 718
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 105/258 (40%), Gaps = 45/258 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---EERLGDSKDKFSTNVLVI 183
++ + +S + +W EKY+P++ +L + ++ + W E+ + D + +++
Sbjct: 234 ENTTVINSNEIIWTEKYRPQTKSDLIGNKNQIAKFYTWINKWEKVIPDRR------AVLL 287
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G GVGKT + + LG E++ T E ++R
Sbjct: 288 AGAPGVGKTTVSKIVGKTLGFNPIEFNASD-----------------TRNKSSIELAIKR 330
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTE 302
I G SI G ++++D++ +G ++ +R L+ ++ T P
Sbjct: 331 IFLNGQI--SIDGSKNKKPLIIMDEV---DGMSSGDRGGITELVKYIKETEQPIV----- 380
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D +D Q L++ + + I+ + L IC +E +S E ++
Sbjct: 381 CICNDIMDKKMQP-------LINV-CETINFSKISVIELTERLKYICDKEGVHVSDENLN 432
Query: 363 LVAQASGGDIRQAITSLQ 380
+A + GD+R I LQ
Sbjct: 433 QIASKAHGDVRYGINMLQ 450
>gi|7493936|pir||T18306 replication factor C protein - Emericella nidulans
gi|2258283|gb|AAB63574.1| replication factor C like protein [Emericella nidulans]
gi|27735373|gb|AAB63523.2| replication factor C like protein [Emericella nidulans]
Length = 1092
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 49/276 (17%)
Query: 120 GLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST- 178
G D + +++ QLW KY P SL + + VE+++AW +K F+
Sbjct: 452 GQTTQDVKAKKENNADDQLWTSKYAPTSLNMICGNKGAVEKLQAWLRNWRKSAKANFTKP 511
Query: 179 --------NVLVITGQAGVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKT 226
++I G G+GKT A+HL A+L +D + T ++ + +
Sbjct: 512 GKDGSGLYRSVMIHGPPGIGKT-----TAAHLVAKLEGYDVVESNASDTRSKKLVESGLL 566
Query: 227 GLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCL 285
G+ T+ L + Y STS K + +L++D++ +G +A +R +
Sbjct: 567 GVLDTTSL----------QGYFSTSNKKVESGKKNLVLIMDEV---DGMSAGDRGGVGAM 613
Query: 286 LLLVRSTHIPTAVVLTE--CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKR 343
+ + T IP ++ E K D +FE + T ++
Sbjct: 614 AAIAKKTQIPLILICNERRLPKMKPFDHV--TFE-------------IPFRRPTVEQVRA 658
Query: 344 TLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSL 379
L IC +E+ + + +D + + + DIRQ I L
Sbjct: 659 RLLTICFREKMKIPPQVLDSLIEGTHADIRQVINML 694
>gi|431890931|gb|ELK01810.1| ATPase family AAA domain-containing protein 5 [Pteropus alecto]
Length = 1839
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERLG------- 170
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1049 DSSRDSGTEDMLWTEKYQPQNSNELIGNELAIKKLHSWLKDWKRRAEWEERQNLKGKRDE 1108
Query: 171 ---------------DSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYE 208
D ++ N ++ITG GVGKTA V A LG +++E
Sbjct: 1109 KQEDLSERIDFKGSSDEEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1161
>gi|403177362|ref|XP_003888779.1| replication factor C subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172838|gb|EHS64742.1| replication factor C subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 776
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 42/269 (15%)
Query: 122 VNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF-----EERLGD----S 172
+ P S S +S QLW KY P++L +L + ++++++AW E R +
Sbjct: 165 LGPPKGSVSEKTSAGQLWTVKYAPKNLGDLCGNKTQIDKIQAWLRDWSVEFRRSNFTKPG 224
Query: 173 KDKFST-NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT 231
KD +V++G GVGKT+ +A G + E + + T ++ + TG +
Sbjct: 225 KDGLGMYRCVVLSGPPGVGKTSAAHLVAKAEGYEVIELNA-SDTRSKKLLE---TGFKDI 280
Query: 232 SKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVR 290
F+E + +S ++LI D +G +A +R L L++
Sbjct: 281 IGNSSIAGFLETSTK------------RSEKLVLIMD--EVDGMSAGDRGGVGALNALIK 326
Query: 291 STHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICR 350
+ IP + D + + L++ + R+ +N I+ + I
Sbjct: 327 KSQIPIIAIAN--------DMSIPKMKPLKATALSLVFRRPNVN-----MIRSRMMSIAF 373
Query: 351 QEQYSLSTEQIDLVAQASGGDIRQAITSL 379
+E + ID + S DIRQ I L
Sbjct: 374 KEGMKIPPNAIDQLVAGSQSDIRQIINML 402
>gi|10434406|dbj|BAB14248.1| unnamed protein product [Homo sapiens]
Length = 801
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
DS+ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 639 DSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 698
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 699 KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 752
>gi|294654838|ref|XP_456919.2| DEHA2A13574p [Debaryomyces hansenii CBS767]
gi|199429188|emb|CAG84897.2| DEHA2A13574p [Debaryomyces hansenii CBS767]
Length = 327
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + VE ++ E+ G+ ++I+G G+GKT ++ +
Sbjct: 13 WVEKYRPHKLDDIVGNEETVERLKLLVED--GNMPH------MIISGLPGIGKTTSIHCL 64
Query: 199 ASH-LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A LG LY+ T LE + D + V +I+++ T S+P
Sbjct: 65 AYELLGPELYQQAT----------------LELNASDDRGIDVVRNKIKQFAQTKISLPA 108
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I+L + +T G A + LR+ + + +T A C ++ +
Sbjct: 109 -GRHKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CNQSSKI------I 154
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E LQS + +++ + L ++ + E ++E + + + GD+RQAI
Sbjct: 155 EPLQS-----RCAILRYTKLSDEQVLERLLEVTKLEDVKYNSEGLQALIFTAEGDMRQAI 209
Query: 377 TSLQ 380
+LQ
Sbjct: 210 NNLQ 213
>gi|448737973|ref|ZP_21720004.1| replication factor C small subunit [Halococcus thailandensis JCM
13552]
gi|445802557|gb|EMA52861.1| replication factor C small subunit [Halococcus thailandensis JCM
13552]
Length = 326
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 46/255 (18%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
S S ++W EKY+P +L E+A Q E +R++ ++D L+ +G AGV
Sbjct: 5 SGSGGRGEIWIEKYRPSALAEVAGQDDITERLRSYV------AQDDLPH--LLFSGPAGV 56
Query: 190 GKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYG 248
GKT + IA +Y D W+E LE + + + V +RI+ +
Sbjct: 57 GKTTSAMAIARE----IYGDD------WRENF------LELNASDERGIDVVRDRIKNFA 100
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
T S G L D ++ ++A LR+ + +T + C ++
Sbjct: 101 RT--SFGGYDYRVIFLDEADALTSDAQSA---LRRTMEQFANNTRF-----ILSCNYSN- 149
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
Q + +QS P+ ++ + +I +E ++ + +D + A+
Sbjct: 150 -----QIIDPIQSRCA-----VFRFGPLPETAVAEYVERIAGEEGIEITDDGVDALVYAA 199
Query: 369 GGDIRQAITSLQFSS 383
GD+R+AI LQ ++
Sbjct: 200 DGDMRKAINGLQAAA 214
>gi|384214919|ref|YP_005606083.1| DNA polymerase III subunit tau [Bradyrhizobium japonicum USDA 6]
gi|354953816|dbj|BAL06495.1| DNA polymerase III, tau subunit [Bradyrhizobium japonicum USDA 6]
Length = 606
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 37/265 (13%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLV 182
P+ DSA +S+ ++ A KY+P S ++L Q V V FE R+ +
Sbjct: 8 PNPDSAGQASTPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRI--------PQAWI 59
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH-NCKTGLEYTSKLDEFE--- 238
+TG GVGKT T R +A L + + PTI + +C+ +E + +D E
Sbjct: 60 LTGVRGVGKTTTARILARALNYEMPDGSVKGPTIHMPTLGVHCQAIME-SRHMDVLEMDA 118
Query: 239 ---NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIP 295
V+ +R+ + P ++ + +ID++ + + AF + L H
Sbjct: 119 ASHTGVDDVRQINDSVRYAPASARYK-VYIIDEVHMLS-TAAFNAFLKT--LEEPPEHAK 174
Query: 296 TAVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
TE K +V S Q F +L+ + D + + L+ I +E
Sbjct: 175 FVFATTEIRKVPVTVLSRCQRF-DLRRVEADV--------------LMKHLANIAAKESV 219
Query: 355 SLSTEQIDLVAQASGGDIRQAITSL 379
+ E + ++A+A+ G +R +++ L
Sbjct: 220 EIEPEALGIIARAAEGSVRDSLSLL 244
>gi|379005451|ref|YP_005261123.1| ATPase related to the helicase subunit of the Holliday junction
resolvase [Pyrobaculum oguniense TE7]
gi|375160904|gb|AFA40516.1| ATPase related to the helicase subunit of the Holliday junction
resolvase [Pyrobaculum oguniense TE7]
Length = 422
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 49/255 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAW----------FEERLGDSKDK--FSTNVLVITGQ 186
W EKY+P+S ++ Q + + +W F R KDK +++ G
Sbjct: 5 WVEKYRPKSFADVVDQEEAKYVLASWICARFRAPKDFCTRWAKKKDKEILDARAVLLAGP 64
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
GVGKT V +A +G L E + + +T + + V R R
Sbjct: 65 PGVGKTTLVHALAREIGYELIELNA----------SDVRTA-------ERLKEVVGRGLR 107
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
GS I+L D++ + + L + ++ ++ ++ +P +V+T
Sbjct: 108 EGSLF------GYGGKIVLFDEVDGLHVKEDAGGL-EAIIEIIENSKVP--IVMTANNPY 158
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D F L+ I + V L ++ + L +IC E E + +A+
Sbjct: 159 DP------RFRPLRDI-----SLVVNLKRLSEEEVVEVLRRICTSEGAKCEEEALRSIAK 207
Query: 367 ASGGDIRQAITSLQF 381
+S GD+R AI LQ
Sbjct: 208 SSLGDLRAAINDLQM 222
>gi|217976468|ref|YP_002360615.1| DNA polymerase III subunits gamma and tau [Methylocella silvestris
BL2]
gi|217501844|gb|ACK49253.1| DNA polymerase III, subunits gamma and tau [Methylocella silvestris
BL2]
Length = 628
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 49/260 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++ A KY+P S ++L Q V + F+ LG + ++TG GVGKT T R
Sbjct: 36 RVLARKYRPSSFDDLIGQEAMVRTLSNAFD--LGRIHQAY-----ILTGVRGVGKTTTAR 88
Query: 197 QIASHLGARLYEWDTPT---------PTIWQE-YMHNCKTGLEYTSKLDEFE------NF 240
+ AR + ++ PT PTI + +C+ +E + +D E
Sbjct: 89 IL-----ARAFNYELPTGDGRPAVDGPTIHMAGFGAHCQAIME-SRHVDVIEMDAASHTG 142
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
++ +R + P ++ + +ID++ + + R AF L + L H+
Sbjct: 143 IDDVREIIEGARYKPVMARFK-VYIIDEVHMLS-RQAFNGLLKT--LEEPPDHVKFLFAT 198
Query: 301 TECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
TE K +V S Q F+ L I G + L+ IC +E+ ++ E
Sbjct: 199 TEIEKVPVTVRSRCQRFD---------------LRRIDAGELSTFLATICAREKVAIEDE 243
Query: 360 QIDLVAQASGGDIRQAITSL 379
+ L+A+A+ G +R A++ L
Sbjct: 244 ALALIARAAEGSVRDALSLL 263
>gi|296810064|ref|XP_002845370.1| replication factor C subunit 4 [Arthroderma otae CBS 113480]
gi|238842758|gb|EEQ32420.1| replication factor C subunit 4 [Arthroderma otae CBS 113480]
Length = 352
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 44/258 (17%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
P D + A + + W EKY+P L+++ + +E ++ ++D +V +I
Sbjct: 15 PRADVSGAPVNYELPWVEKYRPIFLDDVVGNTETIERLKII-------ARDGNMPHV-II 66
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE- 242
+G G+GKT ++ +A L Y+ + LE + + + V
Sbjct: 67 SGMPGIGKTTSILCLARQLLGDTYK----------------EAVLELNASDERGIDVVRN 110
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
RI+ + ++P + ++L + +T+G A + LR+ + + +T A
Sbjct: 111 RIKGFAQKKVTLP-PGRHKLVILDEADSMTSG--AQQALRRTMEIFSTTTRFAFA----- 162
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C +++ + E LQS + + +T+ + + L +IC E+ S + I
Sbjct: 163 CNQSNKI------IEPLQS-----RCAILRYSRLTDAQVVKRLMQICEAEKVKYSDDGIA 211
Query: 363 LVAQASGGDIRQAITSLQ 380
+ ++ GD+RQAI +LQ
Sbjct: 212 ALVFSAEGDMRQAINNLQ 229
>gi|156938086|ref|YP_001435882.1| replication factor C small subunit [Ignicoccus hospitalis KIN4/I]
gi|156567070|gb|ABU82475.1| replication factor C small subunit [Ignicoccus hospitalis KIN4/I]
Length = 329
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 43/252 (17%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
S+ + LWAEKY+P+SL+E+ Q V ++ + EE+ + ++ G G GK
Sbjct: 2 SAPEELLWAEKYRPKSLDEIVDQEDIVRRLKKFVEEK--------NVPHMLFAGPPGTGK 53
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T +A L Y ++Y+ E +D V+ R T
Sbjct: 54 TTAALALAHDLYGEKY----------RQYILELNASDE--RGIDVIRTKVKEFAR-SRTP 100
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
P++P + ++++D+ + TA +Q L L+ T +L +
Sbjct: 101 PTVPFK-----LVILDE---ADNMTA--DAQQALRRLMEMYSTTTRFILL-------ANF 143
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
++ E +QS V P+ + L IC++E + ++ + S GD
Sbjct: 144 PSKIIEPVQSRCV-----YFRFRPLPKDKVIERLKYICQKEGVQCEEDALEEIYNISEGD 198
Query: 372 IRQAITSLQFSS 383
+R+AI LQ ++
Sbjct: 199 MRKAINILQAAA 210
>gi|344238259|gb|EGV94362.1| ATPase family AAA domain-containing protein 5 [Cricetulus griseus]
Length = 1335
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 32/112 (28%)
Query: 129 ASASSSTQQ-LWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER---------- 168
+S S TQ LW EKY+P++ EL ++++ +W EER
Sbjct: 537 SSKDSGTQDMLWTEKYQPQNSNELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDEK 596
Query: 169 ---LGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 597 QEDLSDSMDFKGSSDDEECHLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 648
>gi|448431212|ref|ZP_21584983.1| replication factor C large subunit [Halorubrum tebenquichense DSM
14210]
gi|445688148|gb|ELZ40415.1| replication factor C large subunit [Halorubrum tebenquichense DSM
14210]
Length = 504
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 145/377 (38%), Gaps = 81/377 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W E+Y+P +L E+ K E R+W + +V+ G GVGKT+
Sbjct: 4 WTEQYRPSTLSEVRGNDKARDAFAEWARSWDDHH----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGS----- 249
+A+ +G W+ N D E F R R +
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 250 -TSPSIPGESKSSAILLIDDLPVTNGRTAFERL-RQCLLLLVRSTHIPTAVVLTECGKAD 307
+ G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGAAGGDTASRQLVVLDEADNIHGN--YDRGGASAITKLVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A + ++ L +A +++ ++ SI L ICR+E ++ + +A+
Sbjct: 147 -----ANDYYDMSRGLRNA-TQEIEFRDVSARSIVPVLRDICRKEGIEFESDALQQIAEG 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R A+ LQ ++ +D S++++ + RD+ L LF
Sbjct: 201 NRGDLRGAVNDLQAATQGRD-----SITVADV--------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAH-GQARPVLDFL-HE 485
L L + + L Q A+ V + L ++ VL +A DFL +
Sbjct: 242 LDAVLKEESGEEAL----QSAYAVDETPDDLAAWIE--NNVLDVYEPTEAVRAYDFLANA 295
Query: 486 NCWLDIMRQTMFYNLLR 502
+ WL +R T Y+ R
Sbjct: 296 DVWLGRVRATQNYSYWR 312
>gi|354466808|ref|XP_003495864.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Cricetulus
griseus]
Length = 1849
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 32/112 (28%)
Query: 129 ASASSSTQQ-LWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER---------- 168
+S S TQ LW EKY+P++ EL ++++ +W EER
Sbjct: 1051 SSKDSGTQDMLWTEKYQPQNSNELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDEK 1110
Query: 169 ---LGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1111 QEDLSDSMDFKGSSDDEECHLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1162
>gi|308270884|emb|CBX27494.1| hypothetical protein N47_H23160 [uncultured Desulfobacterium sp.]
Length = 571
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 70/284 (24%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
++A KY+P++ + + Q+ + + S + + VL ++G G GKT R
Sbjct: 17 VFARKYRPQNFDTVVGQKHVTQTLANAI------STGRVAHAVL-LSGPRGTGKTTVARI 69
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT--SKLDEFE------NFVERIRRYGS 249
+A + E TP+P + C++ E T S +D E N VE +R
Sbjct: 70 LAKAMNC--IEGPTPSPC------NVCRSCTEITIGSCVDVLEIDGASNNGVENVRDLRD 121
Query: 250 TSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCL------LLLVRSTHIPTAV---VL 300
P S+ I +ID++ + + + AF L + L ++ + +T P + +L
Sbjct: 122 NIKYKPAYSRYK-IYIIDEVHMLSTQ-AFNALLKTLEEPPPHVMFIFATTEPHKIPVTIL 179
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
+ C + D +++ L+ IT+ + IC++E +S+E
Sbjct: 180 SRCQRHD--------------------FKRIGLDDITD-----QMLYICKKENVDVSSES 214
Query: 361 IDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEE 404
+ +A+A+GG +R A++ +L+L LS S+ EE
Sbjct: 215 LTAIARAAGGCMRDALS-----------LLDLVLSCSEGRINEE 247
>gi|374572304|ref|ZP_09645400.1| DNA polymerase III, subunit gamma/tau [Bradyrhizobium sp. WSM471]
gi|374420625|gb|EHR00158.1| DNA polymerase III, subunit gamma/tau [Bradyrhizobium sp. WSM471]
Length = 605
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 37/265 (13%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLV 182
P+ DSA +S+ ++ A KY+P S ++L Q V V FE R+ +
Sbjct: 8 PNPDSAGQASTPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRI--------PQAWI 59
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH-NCKTGLEYTSKLDEFE--- 238
+TG GVGKT T R +A L + + PT+ + +C+ +E + +D E
Sbjct: 60 LTGVRGVGKTTTARILARALNYEMPDGSVKGPTVQMPTLGVHCQAIME-SRHMDVLEMDA 118
Query: 239 ---NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIP 295
V+ +R+ + P ++ + +ID++ + + AF + L H
Sbjct: 119 ASHTGVDDVRQINDSVRYAPASARYK-VYIIDEVHMLST-AAFNAFLKT--LEEPPEHAK 174
Query: 296 TAVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQY 354
TE K +V S Q F+ L + + + L+ I +E
Sbjct: 175 FVFATTEIRKVPVTVLSRCQRFD---------------LRRVEADVLMKHLANIAAKENV 219
Query: 355 SLSTEQIDLVAQASGGDIRQAITSL 379
+ E + ++A+A+ G +R +++ L
Sbjct: 220 EIEPEALGIIARAAEGSVRDSLSLL 244
>gi|126466117|ref|YP_001041226.1| replication factor C large subunit [Staphylothermus marinus F1]
gi|158513389|sp|A3DNV8.1|RFCL_STAMF RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|126014940|gb|ABN70318.1| replication factor C large subunit [Staphylothermus marinus F1]
Length = 423
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 41/242 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W KY+P+ + ++ Q ++ W E L K K S ++ G AG GKT+ V
Sbjct: 7 WIIKYRPKKIADVVNQDSAKKQFIQWLESWL---KGKPSKKAALLYGPAGCGKTSLVEAA 63
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ G + E + ++ + D +ERI + + S+
Sbjct: 64 ANEYGLEIVEMNAS----------------DFRRRQD-----IERIAKTAAFMRSLFARG 102
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+L+D++ +G TA +L L+ T P VV+T D Q +
Sbjct: 103 K---IILLDEVDGISG-TADRGAIDAILHLLEITRYP--VVMTANNPWD------QKLKP 150
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+ + +A ++ + L +IC+ E+ + +A+ S GD+R AI
Sbjct: 151 LRD-----ASLMIAFKRLSERDVIIVLKRICQLEKLECEDAALREIARRSEGDLRSAIND 205
Query: 379 LQ 380
LQ
Sbjct: 206 LQ 207
>gi|67540266|ref|XP_663907.1| hypothetical protein AN6303.2 [Aspergillus nidulans FGSC A4]
gi|40739497|gb|EAA58687.1| hypothetical protein AN6303.2 [Aspergillus nidulans FGSC A4]
gi|259479483|tpe|CBF69746.1| TPA: Replication factor C like protein
[Source:UniProtKB/TrEMBL;Acc:P78622] [Aspergillus
nidulans FGSC A4]
Length = 1092
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 49/264 (18%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLV 182
+++ QLW KY P SL + + VE+++AW +K F+ ++
Sbjct: 464 NNADDQLWTSKYAPTSLNMICGNKGAVEKLQAWLRNWRKSAKANFTKPGKDGSGLYRSVM 523
Query: 183 ITGQAGVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFE 238
I G G+GKT A+HL A+L +D + T ++ + + G+ T+ L
Sbjct: 524 IHGPPGIGKT-----TAAHLVAKLEGYDVVESNASDTRSKKLVESGLLGVLDTTSL---- 574
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTA 297
+ Y STS K + +L++D++ +G +A +R + + + T IP
Sbjct: 575 ------QGYFSTSNKKVESGKKNLVLIMDEV---DGMSAGDRGGVGAMAAIAKKTQIPLI 625
Query: 298 VVLTE--CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
++ E K D +FE + T ++ L IC +E+
Sbjct: 626 LICNERRLPKMKPFDHV--TFE-------------IPFRRPTVEQVRARLLTICFREKMK 670
Query: 356 LSTEQIDLVAQASGGDIRQAITSL 379
+ + +D + + + DIRQ I L
Sbjct: 671 IPPQVLDSLIEGTHADIRQVINML 694
>gi|432330756|ref|YP_007248899.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
gi|432137465|gb|AGB02392.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
Length = 322
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 54/276 (19%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKT 192
+ +W EKY+P+ L ++ Q + VE + ++ S N+ L+ TG AGVGKT
Sbjct: 4 SHTIWIEKYRPQKLADIVGQDEIVERLSSYVR----------SGNLPHLLFTGSAGVGKT 53
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP 252
+ AR + D+ WQ E +D N +I+++ T+P
Sbjct: 54 TAAVTL-----AREFFRDS-----WQMNFRELNASDE--RGIDVVRN---QIKQFARTTP 98
Query: 253 SIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
GE+ + IL +D D T+ + A R + ++ T + C + +
Sbjct: 99 L--GEA-TFKILFLDEADALTTDAQAALRRTME--------SYAQTCRFILSCNYSSKII 147
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
QS + P+ +++ + +I +E +++ +D + + G
Sbjct: 148 DPIQSRCAIYR-----------FKPLGPEAVREEVRRIASREGLTITDGAMDAIVYIAQG 196
Query: 371 DIRQAITSLQFSSLKQDPMLNLS--LSISKPNFPEE 404
D+R+AI +LQ +++ +P ++ SI+ PEE
Sbjct: 197 DMRKAINALQGAAII-NPAIDEKRVYSITSTARPEE 231
>gi|15224020|ref|NP_177885.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
gi|12323399|gb|AAG51680.1|AC010704_24 hypothetical protein; 83388-78455 [Arabidopsis thaliana]
gi|332197880|gb|AEE36001.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
Length = 1151
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 110/306 (35%), Gaps = 83/306 (27%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKV----EEVRAWFEERLGDSKDKFST------- 178
S+ +LW +KY+PRS E+ + V E +R W+E +KD S+
Sbjct: 304 SSGQPCNRLWVDKYQPRSASEVCGNTESVKVMNEWLRQWYERGFQPNKDFLSSDEDKSQD 363
Query: 179 ----------------------NVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTI 216
NVL+I G AG GK+A + A G ++ E +T
Sbjct: 364 ADYNCSESDSDSEKSGAEDSQKNVLLIVGPAGSGKSAAIHACAKEQGFKILESNT----- 418
Query: 217 WQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP-------GESKSSAILLIDDL 269
C++G K F E ++ Y + P G + ++ L
Sbjct: 419 -----SECRSGTVVRQK------FGEALKSYSLSRSLDPLFNSCTDGNGVEDVVEVMPVL 467
Query: 270 PVTNGRTA------FERLRQC------LLLLVRSTHIPT--AVVLTECGKADSVDSTAQS 315
+ N FE + C L+ ++ + VVLT K + +
Sbjct: 468 HIQNDGANLKPLILFEDVDICFAEDRGLVSAIQQIAVKAKGPVVLTANDKNHGLPDNLER 527
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
E I +++ N LS +C E+ ++ ++ + GGDIR+A
Sbjct: 528 IE----IYFSLPSKEELFN---------HLSLVCAAEEVKVNHGSLEEMTTFCGGDIRKA 574
Query: 376 ITSLQF 381
I LQF
Sbjct: 575 IMQLQF 580
>gi|187954843|gb|AAI41181.1| Atad5 protein [Mus musculus]
Length = 1772
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 34/116 (29%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER--------- 168
D + S + LW EKY+P++ EL V+++ +W EER
Sbjct: 973 DPSRDSGTEDMLWTEKYQPQNSNELIGNELAVKKLHSWLKDWKRRAELEERHNLKGKRDE 1032
Query: 169 -------LGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1033 KEEGILDLSDSTDFKGSSDDEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1088
>gi|118386221|ref|XP_001026231.1| ATPase, AAA family protein [Tetrahymena thermophila]
gi|89307998|gb|EAS05986.1| ATPase, AAA family protein [Tetrahymena thermophila SB210]
Length = 321
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 52/252 (20%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
+++++W EKY+PR+L+E+ + ++R EE G+ + +++ G G+GKT+
Sbjct: 2 ASKEIWLEKYRPRTLDEVQGNEDALIKLRTIAEE--GNVPN------MILVGPPGIGKTS 53
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSP 252
+V +A L A +++ +C LE + + + V E+I+ +
Sbjct: 54 SVLCLARTLLADVFD--------------SC--ALEMNASDERGIDVVREKIKSFAQKKV 97
Query: 253 SI-PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
++ PG K I+++D+ + E +Q L +++ T VL+ C +
Sbjct: 98 NLKPGLHK---IIILDE-----ADSLTEGAQQALRMIISDFADTTRFVLS-CNDS----- 143
Query: 312 TAQSFEELQSILVDAGARKVAL---NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
S L+DA + A+ +T+ I R L +I +E + + +
Sbjct: 144 ---------SKLIDAIQSRCAILRFTKLTDEQILRRLEEIVEKENIKIDKGGKEALLFTC 194
Query: 369 GGDIRQAITSLQ 380
GD+RQAI +LQ
Sbjct: 195 EGDMRQAINNLQ 206
>gi|146181988|ref|XP_001023745.2| ATPase, AAA family protein [Tetrahymena thermophila]
gi|146143985|gb|EAS03500.2| ATPase, AAA family protein [Tetrahymena thermophila SB210]
Length = 373
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 113/276 (40%), Gaps = 63/276 (22%)
Query: 125 DHDSASASSSTQQL------WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST 178
D++ + T++L W EKY+P +EE++ Q + ++ ++ S
Sbjct: 24 DNNRMEEETKTEELNNNLLPWVEKYRPNKIEEVSYQEEVIKSLQGVL----------LSG 73
Query: 179 NV--LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE 236
N+ L++ G G GKT+++ A L PT ++E + LE + D
Sbjct: 74 NLPHLILHGPPGTGKTSSILAFAKQLYG---------PTFYKERI------LELNASDDR 118
Query: 237 FENFV-ERIRRYG----STSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLV 289
V ++I+++ S +P + + I+++D D T ++A R+ +
Sbjct: 119 GIQIVRDKIKKFAQQVVSKNPDKSFKCPNFKIIILDEADSMTTEAQSALRRI-------I 171
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGAR--KVALNPITNGSIKRTLSK 347
T T + C + I+ G+R K PI + L +
Sbjct: 172 EDTSSTTRFCII-CNY-------------ITKIIEPLGSRCVKFRFKPIPLEAQITKLEE 217
Query: 348 ICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSS 383
IC+ E E ++ + + S GD+R+++ LQ +S
Sbjct: 218 ICKTEDIEYEKEALEKLIKISNGDLRKSVNLLQSAS 253
>gi|73669094|ref|YP_305109.1| replication factor C small subunit [Methanosarcina barkeri str.
Fusaro]
gi|110287811|sp|Q46C63.1|RFCS_METBF RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|72396256|gb|AAZ70529.1| replication factor C small subunit [Methanosarcina barkeri str.
Fusaro]
Length = 334
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 112/260 (43%), Gaps = 56/260 (21%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
S+ +++W EKY+P L+++A Q + +E ++++ + + L+ +G GVGK
Sbjct: 4 STIKEEIWIEKYRPVRLDQVAGQEETIERLKSYVATK--------NLPHLLFSGPPGVGK 55
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
TA+ IA + +W+E E +D +I+ + T+
Sbjct: 56 TASAVSIAREIFG---------EDLWRENFTELNASDE--RGIDVVRT---KIKNFAKTA 101
Query: 252 PSIPGESKSSAILLID--DLPVTNGRTAFERLRQ-----CLLLLVRSTHIPTAVVLTECG 304
P E K I+ +D D ++ ++A R + C +L
Sbjct: 102 PMGGAEFK---IIFLDEADALTSDAQSALRRTMERFSNNCRFIL---------------- 142
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
S + +++ E +QS R+ +++ +I++ L I + + S++ + + +
Sbjct: 143 ---SCNYSSRIIEPIQSRCAVFRFRR-----LSDEAIRKRLEYIAKDQVLSITEDGYEAL 194
Query: 365 AQASGGDIRQAITSLQFSSL 384
S GD+R+A+ SLQ ++
Sbjct: 195 VYVSQGDMRKAVNSLQAAAF 214
>gi|170290625|ref|YP_001737441.1| DNA replication ATPase HolB small subunit [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174705|gb|ACB07758.1| ATPase involved in DNA replication HolB, small subunit [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 331
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 45/251 (17%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
T +LW EKY+P++L+++ Q + ++ + E+R S L+ G AG GKT T
Sbjct: 2 TFELWVEKYRPKTLDDVVGQDDIIRALKGFVEKR--------SMPHLLFAGPAGTGKTTT 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A+ LY+ + + E + + G+ + +I+ + T+P
Sbjct: 54 ALALAND----LYKSEELVAANYLELNASDERGI---------DTIRTKIKDFAKTAPF- 99
Query: 255 PGESKSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
GE I L D+L + + A R+ + + T + C + +
Sbjct: 100 -GEVPFKIIHLDEADNL-TADAQQALRRIMEM--------YSATTRFIFAC------NYS 143
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
++ E +QS PI +IK L I +E + + I + + GD+
Sbjct: 144 SKIIEPIQS-----RCAVFRFGPIPEEAIKNRLIMIAEREGLKYTEDGISAIIYVAEGDL 198
Query: 373 RQAITSLQFSS 383
R+AI LQ +S
Sbjct: 199 RKAINLLQTAS 209
>gi|429216858|ref|YP_007174848.1| DNA polymerase III, subunit gamma/tau [Caldisphaera lagunensis DSM
15908]
gi|429133387|gb|AFZ70399.1| DNA polymerase III, gamma/tau subunit [Caldisphaera lagunensis DSM
15908]
Length = 333
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 99/257 (38%), Gaps = 53/257 (20%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGK 191
SS T+ LW EKY+PR+L+++ Q+ + + +E+ + L+ G G GK
Sbjct: 10 SSVTELLWTEKYRPRTLKDIINQQDITTRLMKFVQEK--------NMPHLLFAGPPGTGK 61
Query: 192 TATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
T +A L Y Q++M E +D V+ R T
Sbjct: 62 TTAAHALAHDLYGESY----------QQFMLELNASDE--RGIDTIREKVKEFAR-SKTP 108
Query: 252 PSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVR---STHIPTAVVLTECGKA 306
P IP + I+L+D D ++ + A RL + R + + P+ ++
Sbjct: 109 PEIPFK-----IVLLDEADNMTSDAQQALRRLMELYSASTRFILAANYPSKII------- 156
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D + S F + + L I +E + +D++ +
Sbjct: 157 DPIQSRCAFFR---------------FTSLKKEDVIDRLKYIADKEGVDYEEDALDIIFE 201
Query: 367 ASGGDIRQAITSLQFSS 383
S GD+R+AI LQ S+
Sbjct: 202 ISEGDMRKAINILQASA 218
>gi|71143102|ref|NP_001025027.1| ATPase family AAA domain-containing protein 5 [Mus musculus]
gi|81918252|sp|Q4QY64.1|ATAD5_MOUSE RecName: Full=ATPase family AAA domain-containing protein 5; AltName:
Full=Chromosome fragility-associated gene 1 protein
gi|49175357|gb|AAT52048.1| chromosome fragility associated gene 1 [Mus musculus]
gi|182888005|gb|AAI60289.1| ATPase family, AAA domain containing 5 [synthetic construct]
Length = 1826
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 34/116 (29%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER--------- 168
D + S + LW EKY+P++ EL V+++ +W EER
Sbjct: 1027 DPSRDSGTEDMLWTEKYQPQNSNELIGNELAVKKLHSWLKDWKRRAELEERHNLKGKRDE 1086
Query: 169 -------LGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1087 KEEGILDLSDSTDFKGSSDDEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1142
>gi|336363951|gb|EGN92318.1| hypothetical protein SERLA73DRAFT_79676 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385927|gb|EGO27073.1| hypothetical protein SERLADRAFT_434847 [Serpula lacrymans var.
lacrymans S7.9]
Length = 978
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 58/276 (21%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITG 185
+ QLW KY P+SL+E+ + +VE+++ W + + K F +++TG
Sbjct: 409 SSQLWTTKYAPQSLKEICGNKGQVEKLQLWLHDWSNNLKSGFKKPGKNGMNIFRAVMVTG 468
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
G+GKT + +HL A+L + T +E + + VE
Sbjct: 469 SPGIGKTTS-----AHLCAKLEGF----------------TPIELNASDARSKKLVESGM 507
Query: 246 RYGSTSPS--IPGESKSSAI---------LLIDDLPVTNGRTAFERLR-QCLLLLVRSTH 293
+TS + G S +A+ L++D++ +G +A +R L L++ +
Sbjct: 508 NINNTSLDGWMGGNSSINAVGVAITDKTCLIMDEV---DGMSAGDRGGVGALNALIKKSK 564
Query: 294 IPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ 353
IP + D AQ + L + + RK P R L+ I +E+
Sbjct: 565 IPIICIAN--------DRNAQKLKPLLATTFNLPFRK----PEATAVRSRMLT-IAFKEK 611
Query: 354 YSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
L ID + + DIRQ + L L D M
Sbjct: 612 MKLPANVIDQLITGAQSDIRQVLNMLSTWKLSSDTM 647
>gi|402819886|ref|ZP_10869453.1| DNA polymerase III subunits gamma and tau [alpha proteobacterium
IMCC14465]
gi|402510629|gb|EJW20891.1| DNA polymerase III subunits gamma and tau [alpha proteobacterium
IMCC14465]
Length = 661
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 47/268 (17%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVI 183
+ ++ + S ++ A KY+PR +++ Q V+ +R FE R+ + ++
Sbjct: 31 EENNVTPKSEAYEVLARKYRPRIFDDMIGQEAMVQTLRNAFETGRIA--------HAFML 82
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNC-----------KTGLEYTS 232
TG GVGKT T R +A L + + D P + + H + +
Sbjct: 83 TGVRGVGKTTTARILARALNYQTAQQDAPNVDMQEPGFHCADIMAGSHVDVIEMDAASAT 142
Query: 233 KLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRST 292
+D+ +E +R S + + +ID++ + + + AF L + L
Sbjct: 143 GIDDIREIIENVRYRPSAA--------RYKVFIIDEVHMLSTQ-AFNGLLKT--LEEPPA 191
Query: 293 HIPTAVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
H+ TE K +V S Q F+ L +T L+K+C
Sbjct: 192 HVKFVFATTEIRKVPVTVLSRCQRFD---------------LRRLTIEETLHLLNKVCTA 236
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSL 379
E E + L+A+A+ G R A++ L
Sbjct: 237 EGSRFQDESLALIARAAEGSARDALSLL 264
>gi|327400517|ref|YP_004341356.1| replication factor C large subunit [Archaeoglobus veneficus SNP6]
gi|327316025|gb|AEA46641.1| Replication factor C large subunit [Archaeoglobus veneficus SNP6]
Length = 502
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 32/243 (13%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P++++++ +K +E+V W + + + L+ G G GKT+
Sbjct: 2 LWVEKYRPKTIKDVVADKKVLEKVVTWAK----NWEKGIVQKPLLFAGPPGTGKTSLALA 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
IA+ G + E + W+ H G F E I G G
Sbjct: 58 IANTFGWEVVELNASDQRNWRIIYHIVGEG-----------AFSETISDEGEFLSIRQGR 106
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K ++++D++ + + + LL + P + E +
Sbjct: 107 LK---LIILDEVDNIHKKEDAGGEGALIRLLKKKPRQPIILTANEPYNLSA--------- 154
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
EL+++ R++ + + L +IC QE ++ +A+ +GGD+R AI
Sbjct: 155 ELRNLCEMITFRRLDVRRVVA-----VLERICAQEGIRADRRALESIARNAGGDLRAAIN 209
Query: 378 SLQ 380
LQ
Sbjct: 210 DLQ 212
>gi|321469644|gb|EFX80623.1| hypothetical protein DAPPUDRAFT_318220 [Daphnia pulex]
Length = 1045
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 51/273 (18%)
Query: 129 ASASSSTQQLWAEKYKPRSLEEL-------AVQRKKVEEVRAWFEERLGDSKDK---FST 178
A + Q W +KYKP SL+++ ++ +K V +++W++ R G K +ST
Sbjct: 458 AEGNDQAQLPWVDKYKPTSLKQVIGMHGDRSIAKKLVYWLKSWYDNR-GKKLAKPSPWST 516
Query: 179 N-------VLVITGQAGVGKTATVRQIASHLGARLYEW---DTPTPTIWQEYMHNCKTGL 228
N +++G G+GKT T A LG L E DT + + E++ +
Sbjct: 517 NDDGAFFKAALLSGPPGIGKTTTAHLAAKELGYDLVEMNASDTRSKRLLHEHVMELLSSQ 576
Query: 229 EYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLL 288
+S Y S I G K +L++D++ G +++ L+ +
Sbjct: 577 SLSS--------------YAHGSAQIEGGRKR--VLVMDEVDGMAGNEDRGGIQE-LIAM 619
Query: 289 VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI 348
++++ IP + D L + D K + ++ + I
Sbjct: 620 IKTSKIPVVCICN--------DRQHPKIRSLSNYCYDLKFTKPKIE-----QVRGAMMSI 666
Query: 349 CRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
C +E SL E +D + + D+RQ + L
Sbjct: 667 CFKEGLSLKPEALDEIIMGANQDVRQVLHHLSM 699
>gi|448460408|ref|ZP_21597233.1| replication factor C large subunit [Halorubrum lipolyticum DSM
21995]
gi|445807149|gb|EMA57235.1| replication factor C large subunit [Halorubrum lipolyticum DSM
21995]
Length = 497
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 144/377 (38%), Gaps = 81/377 (21%)
Query: 139 WAEKYKPRSLEELAVQRKK----VEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
W EKY+P +L E+ K E R+W + R +V+ G GVGKT+
Sbjct: 4 WTEKYRPSTLSEVRGNDKARDAFAEWARSWDDHR----------EAVVLHGSPGVGKTSA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR------YG 248
+A+ +G W+ N D E F R R
Sbjct: 54 AHALANDMG-------------WETVELNASD----QRTADVIERFAGRAARNATLGGSA 96
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL-LVRSTHIPTAVVLTECGKAD 307
+ + G++ S ++++D+ +G ++R + LV+ + P ++
Sbjct: 97 AGGGATGGDTASRQLVILDEADNIHGN--YDRGGASAITELVKESGQPIVLI-------- 146
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
A + ++ L +A ++ ++ SI L +CR+E ++ ++ +A+
Sbjct: 147 -----ANDYYDMARGLRNA-TEEIEFRDVSARSIVPVLRDVCRKEGIEFESDALERIAER 200
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+ GD+R AI LQ ++ +D SI+ + + RD+ L LF
Sbjct: 201 NRGDLRGAINDLQAATEGRD-------SIAVEDV------------VTGDRDKALGLFPF 241
Query: 428 LGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVLSQAHG-QARPVLDFL-HE 485
L L + + L Q A+ V + L ++ VL +A DFL +
Sbjct: 242 LDAVLKEESAEEAL----QSAYAVDETPDDLTKWIE--NNVLDVYEPMEAVRAYDFLANA 295
Query: 486 NCWLDIMRQTMFYNLLR 502
+ WL +R T Y R
Sbjct: 296 DVWLGRVRATQNYTYWR 312
>gi|448726685|ref|ZP_21709077.1| replication factor C small subunit [Halococcus morrhuae DSM 1307]
gi|445793731|gb|EMA44302.1| replication factor C small subunit [Halococcus morrhuae DSM 1307]
Length = 326
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 47/277 (16%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
S S ++W EKY+P +L E+A Q E +R++ ++D L+ +G AGV
Sbjct: 5 SGSGGRGEIWIEKYRPSALAEVAGQDDITERLRSYV------AQDDLPH--LLFSGPAGV 56
Query: 190 GKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYG 248
GKT + IA +Y D W++ LE + + + V +RI+ +
Sbjct: 57 GKTTSAMAIARE----IYGDD------WRDNF------LELNASDERGIDVVRDRIKNFA 100
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
T S G L D ++ ++A LR+ + +T + C ++
Sbjct: 101 RT--SFGGYDYRVIFLDEADALTSDAQSA---LRRTMEQFANNTRF-----ILSCNYSN- 149
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
Q + +QS P+ ++ + +I +E ++ + +D + A+
Sbjct: 150 -----QIIDPIQSRCA-----VFRFGPLPETAVAEYVEQIAGEEGIEITDDGVDALVYAA 199
Query: 369 GGDIRQAITSLQFSSLKQDPMLNLSL-SISKPNFPEE 404
GD+R+AI LQ ++ + + ++ +I+ PEE
Sbjct: 200 DGDMRKAINGLQAAATTGETVDEEAVYAITAAARPEE 236
>gi|145590270|ref|YP_001152272.1| replication factor C large subunit [Pyrobaculum arsenaticum DSM
13514]
gi|158514159|sp|A4WGV3.1|RFCL_PYRAR RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|145282038|gb|ABP49620.1| AAA ATPase, central domain protein [Pyrobaculum arsenaticum DSM
13514]
Length = 422
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 49/255 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAW----------FEERLGDSKDK--FSTNVLVITGQ 186
W EKY+P+S ++ Q + + +W F R KDK +++ G
Sbjct: 5 WVEKYRPKSFADVVDQEEAKYVLASWICARFRAPKDFCTRWAKKKDKEILDARAVLLAGP 64
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
GVGKT + +A +G L E + + +T + + V R R
Sbjct: 65 PGVGKTTLIHALAREIGYELIELNA----------SDVRTA-------ERLKEVVGRGLR 107
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
GS I+L D++ + + L + ++ ++ ++ +P +V+T
Sbjct: 108 EGSLF------GYGGKIVLFDEVDGLHVKEDAGGL-EAIIEIIENSKVP--IVMTANNPY 158
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D F L+ I + V L ++ + L +IC E E + +A+
Sbjct: 159 DP------RFRPLRDI-----SLVVNLKRLSEEEVVEVLRRICTSEGAKCEEEALRSIAK 207
Query: 367 ASGGDIRQAITSLQF 381
+S GD+R AI LQ
Sbjct: 208 SSLGDLRAAINDLQM 222
>gi|68486597|ref|XP_712849.1| hypothetical protein CaO19.14180 [Candida albicans SC5314]
gi|46434265|gb|EAK93680.1| hypothetical protein CaO19.14180 [Candida albicans SC5314]
Length = 688
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 117 RFEGLVNPDHDS----ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--- 169
R + VNP ++ + +LW +++ P L +L + +++++++W E
Sbjct: 111 RVKATVNPKGETFGFQKKEVAPQDKLWTDRHAPTDLNQLCGNKGQIQKLKSWLENWFDNQ 170
Query: 170 -----GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYE 208
G++ D S ++I+G G+GKT+ +A LG + E
Sbjct: 171 ARGFKGNASDPDSFRAVLISGPPGIGKTSAAHLVAKSLGFDIIE 214
>gi|68486652|ref|XP_712820.1| hypothetical protein CaO19.6891 [Candida albicans SC5314]
gi|46434235|gb|EAK93651.1| hypothetical protein CaO19.6891 [Candida albicans SC5314]
Length = 688
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 117 RFEGLVNPDHDS----ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--- 169
R + VNP ++ + +LW +++ P L +L + +++++++W E
Sbjct: 111 RVKATVNPKGETFGFQKKEVAPQDKLWTDRHAPTDLNQLCGNKGQIQKLKSWLENWFDNQ 170
Query: 170 -----GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYE 208
G++ D S ++I+G G+GKT+ +A LG + E
Sbjct: 171 ARGFKGNASDPDSFRAVLISGPPGIGKTSAAHLVAKSLGFDIIE 214
>gi|395849287|ref|XP_003797262.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Otolemur
garnettii]
Length = 1816
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL-------- 169
D++ S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1012 DASKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1071
Query: 170 ------------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ + N ++ITG GVGKTA V A LG +++E
Sbjct: 1072 KQEDLSASIDFKGGSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1125
>gi|335433965|ref|ZP_08558775.1| replication factor C small subunit [Halorhabdus tiamatea SARL4B]
gi|334898223|gb|EGM36337.1| replication factor C small subunit [Halorhabdus tiamatea SARL4B]
Length = 761
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
++ S + Q++W EKY+P++LE++A V ERLG + + ++ G
Sbjct: 3 EAESTRAGRQEVWIEKYRPQTLEDIAGHEAIV--------ERLGSYVSRNDLSHMLFAGP 54
Query: 187 AGVGKTATVRQIASHLGARLYE 208
AGVGKT IA L +E
Sbjct: 55 AGVGKTTAATAIARELYGEDWE 76
>gi|405964852|gb|EKC30294.1| Replication factor C subunit 2 [Crassostrea gigas]
Length = 344
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 108/260 (41%), Gaps = 48/260 (18%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVI 183
P +S + +Q W EKY+P L ++ + + + + +D NV +I
Sbjct: 12 PVATKSSGNPHHEQPWVEKYRPVKLHDIVGNEETISRLEVF-------GRDGNVPNV-II 63
Query: 184 TGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE- 242
G G GKT ++ +A + Y LE + D + V
Sbjct: 64 AGPPGTGKTTSILCLARAMLGPSYR----------------DAVLEMNASNDRGIDVVRN 107
Query: 243 RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTE 302
+I+ + ++P + + I+L + +T+G A + LR+ + + ++T A
Sbjct: 108 KIKMFAQQKVTLP-KGRHKIIILDEADSMTDG--AQQALRRTMEIYSKTTRFALA----- 159
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLSTEQ 360
C +D + E +QS R L + +T+ + + L ++C E S + +
Sbjct: 160 CNASDKI------IEPIQS-------RCAVLRYSKLTDAQVLKRLLEVCEAEAVSYTDDG 206
Query: 361 IDLVAQASGGDIRQAITSLQ 380
++ + + GD+RQA+ +LQ
Sbjct: 207 LEAIVFTAQGDMRQALNNLQ 226
>gi|344285660|ref|XP_003414578.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Loxodonta
africana]
Length = 1855
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 31/113 (27%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF-------------------EE 167
DS+ S LW EKY+P++ EL ++++ +W +E
Sbjct: 1055 DSSKDSGIEDMLWTEKYQPQNSSELIGNEPAIKKLHSWLKDWKRRAEVEERQNLKGRKDE 1114
Query: 168 RLGDSKDKFS------------TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
+ D D N ++ITG GVGKTA V A LG +++E
Sbjct: 1115 KQEDPSDNIDFKESSDDEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1167
>gi|156087871|ref|XP_001611342.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798596|gb|EDO07774.1| conserved hypothetical protein [Babesia bovis]
Length = 944
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 111/524 (21%), Positives = 195/524 (37%), Gaps = 143/524 (27%)
Query: 77 RDLALGSSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVN--------PD--- 125
R GS ++ L NK K + IQ N FL ++ + + PD
Sbjct: 365 RHYTTGSKYKKALEFNKTK-----DAGIQLLNESEFLALIDYQNVSSRLTAVKTIPDESV 419
Query: 126 HDSASASSSTQQLWAEKYKPRSLEEL----AVQRKKVEEVRAWFEERLGDSKDKFSTNVL 181
H A+++ +T EKY+P L +L A RK V+ +++W L
Sbjct: 420 HTIATSTDNTSLPLCEKYRPIHLTDLIGNEANIRKVVDWLKSWSPGSL--------PACA 471
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+++G GVGKT T + +A+ G E++ + L S +++ V
Sbjct: 472 LLSGPPGVGKTTTAKIVAAECGYECVEFNA--------------SDLRNKSAVEKISMLV 517
Query: 242 ERIRRYGSTSPSIPGESK-SSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVV 299
G S S GE + +++L+D++ +G A +R Q ++ L+ P +
Sbjct: 518 T-----GGQSFSFLGECRMKKSLVLLDEI---DGMGAGDRGGLQAVVALLPKARCP---I 566
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
+ C D Q L +D V + T + ++ +C E ++ +
Sbjct: 567 ICICN-----DRHNQKMTTLGGKSLD-----VRFSSPTLMQFRARIASVCAAEGITVPQD 616
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRD 419
+ + + GGD R A+ +++F+SL +LS S + K GH
Sbjct: 617 TVAQLYEQGGGDFRHALNAIEFNSLGDSGSKGHALSGS-----DAKDIGH---------- 661
Query: 420 ETLSLFHALGKFLHNK--------RETDNLVKMDQD------------------------ 447
T +LF A G+ + RE + + +D +
Sbjct: 662 -TKNLFEATGRLFSARSGSTEKRYRELEQIFFIDYNMMPLMAQENYIKFIPVNNRALSIL 720
Query: 448 -----AFVVKDK----------FSRLP----LKMDAPEKVLSQAHGQARPVLDFL----- 483
+FV D+ FS LP L P V+S A G R L F
Sbjct: 721 QALSQSFVEADRVEEFLKRTQSFSLLPDLAILSSILPAMVISTAGGSCRERLMFPQYLGR 780
Query: 484 ------HENCWLDIMRQTMFYNLLRLQLLLVEYYLEILIQCLLG 521
++ DI + +L+R L+++ YL++L ++G
Sbjct: 781 FSTTSKNKRFLSDIGKHMGHRSLIRSYPLVIDGYLDLLYMKIMG 824
>gi|50306785|ref|XP_453368.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642502|emb|CAH00464.1| KLLA0D06897p [Kluyveromyces lactis]
Length = 835
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 33/262 (12%)
Query: 122 VNPDHDSASASSSTQ--QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN 179
V D + +S S+ T+ +LW KY P L +L + +++++ W E S K S
Sbjct: 273 VGKDVNLSSKSTVTEDSKLWTTKYAPTDLRQLCGNKGAIQKLKTWLES--WSSGKKPSMR 330
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
++++G G+GKT +A LG + E + + K L++ S + F+
Sbjct: 331 AVMLSGPPGIGKTTAAHLVAKSLGYDVLEKNASDVRSKGLLNASVKFALDHKSVIGMFK- 389
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTA 297
S S ++ ++++D++ +G R +L Q R T+ P
Sbjct: 390 ---------SISDDHYSKNGKRFVIIMDEVDGMSGGDRGGVGQLAQ----YCRKTNTPMI 436
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
++ E ++ +++ D + ++K L I +E++ L
Sbjct: 437 LICNE-----------RNLPKMRPF--DHSVLDIPFRRPDAQAVKARLMTIAMREKFKLD 483
Query: 358 TEQIDLVAQASGGDIRQAITSL 379
ID + + GD+RQ I L
Sbjct: 484 PNVIDRLVSVTRGDMRQIINLL 505
>gi|407837802|gb|EKF99863.1| replication factor C, subunit 4, putative [Trypanosoma cruzi]
Length = 340
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 41/250 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+S+E++ V +R +E G+ + L++ G G GKT +V +
Sbjct: 8 WVEKYRPKSMEDIVGNADAVSRLRVISKE--GNLPN------LLLCGPPGTGKTTSVLCL 59
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIP-- 255
A L L + D T +E + LE + D + V E+I+ + T ++P
Sbjct: 60 ARTL---LSDQDGGDTTALKEAV------LELNASDDRGLDVVREKIKLFAQTKKTLPQK 110
Query: 256 -GESKSSAI----LLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
ES I ++I D + A + LR+ + L +T A C + +
Sbjct: 111 VNESSQQKINLHKIVILDEADSMTPAAQQALRRTMELHSSTTRFAFA-----CNNSHKI- 164
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
E +QS V +T+ I + L+ I +QE + + + ++ + + G
Sbjct: 165 -----IEPIQS-----RCAVVRFKKLTHADILKRLTYIIQQENVTYTDDGLEALLYLAEG 214
Query: 371 DIRQAITSLQ 380
D+R A+ +LQ
Sbjct: 215 DLRSAVNALQ 224
>gi|452847848|gb|EME49780.1| hypothetical protein DOTSEDRAFT_40924, partial [Dothistroma
septosporum NZE10]
Length = 611
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 102/270 (37%), Gaps = 37/270 (13%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NV 180
SAS +LW +Y P+SL ++ + +VE+++ W + F
Sbjct: 15 SASGVDSRLWTVRYAPQSLNQICGNKTQVEKLQRWLRAFPKNQSKGFKMAGPDGSGVHRA 74
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENF 240
++I G G+GKT +A G + E + + K L TS + F +
Sbjct: 75 VMIHGPPGIGKTTAAHLVAKMEGFDVVESNASDTRSKKLVETGLKGVLSTTSLMGYFSHG 134
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV-RSTHIPTAVV 299
+ + SK L++D++ +G +A +R L V + T IP ++
Sbjct: 135 ADDVE-----------ASKKKLCLIMDEV---DGMSAGDRGGVGALAAVCKKTQIPMILI 180
Query: 300 LTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
D + + D R+ P T I+ + I +E +
Sbjct: 181 CN--------DRKLPKMKPFDFVTYDLPFRR----PTTE-QIRARIMTINYREGLKMPVN 227
Query: 360 QIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
I+ + + SG DIRQ + + + L + M
Sbjct: 228 VINALIEGSGADIRQVVNMVSTAKLDSENM 257
>gi|83320030|ref|YP_424007.1| DNA polymerase III subunits gamma/tau [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283916|gb|ABC01848.1| DNA polymerase III gamma-tau subunits [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 669
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 41/268 (15%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
++ +Q Y+P+ +A ++ E+++ D++ + L+ +GQ G GKT
Sbjct: 2 NTNKQSLYRAYRPKDFNSVAGHNS----IKEILEKQIKDNR---INHALLFSGQRGTGKT 54
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE------NFVERIRR 246
+ R A + T + E +NCK E +D E N V+ IR
Sbjct: 55 SVARIFAKTVNCL-----NLTGSKACEQCNNCKLANE-NQLIDIIEIDAASNNGVDEIRE 108
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVL--TECG 304
++ ++P SK + +ID++ + + AF L + L + T +L TE
Sbjct: 109 IKNSVSTLPINSKYK-VYIIDEVHML-TKQAFNALLKTL----EEPPVYTIFILATTEFN 162
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
K Q+IL + + I S+K L I QE Y + E +D +
Sbjct: 163 KIP------------QTIL--SRCQIFNFTKIDKNSLKNRLQYIVNQENYQIEKEVLDEI 208
Query: 365 AQASGGDIRQAITSLQFSSLKQDPMLNL 392
S G +R AI L+ L D ++ +
Sbjct: 209 FYLSEGSLRDAINILEQLMLATDDLITI 236
>gi|256085158|ref|XP_002578790.1| cell cycle checkpoint protein rad17 [Schistosoma mansoni]
gi|350644842|emb|CCD60436.1| cell cycle checkpoint protein rad17, putative [Schistosoma mansoni]
Length = 437
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 37/173 (21%)
Query: 329 RKVALNPITNGSIKRTLSKI--CRQEQYSL---STEQIDLVAQASGGDIRQAITSLQFSS 383
+++ NPI I + LS+I +Q+ L S + + +A GDIR A+ L F
Sbjct: 82 QRIEFNPIAPTLIIKALSRIGNIMAKQFGLKLPSRQLLQSIANDCSGDIRSAVNQLHF-- 139
Query: 384 LKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHNKRETDNLVK 443
++ + + RD LSLF +GK L+ KR+ V
Sbjct: 140 ----------------QLSSDRGNWNNSTLPYSHRDGVLSLFRTIGKILYCKRKP---VS 180
Query: 444 MDQDAFVVKDK----------FSRLPLKMDAPEKVLSQAHGQARPVLDFLHEN 486
+Q A + +K + R PL D E++L H ++ +LHEN
Sbjct: 181 NEQIASSLNEKEGELPSHLVTWRRPPLDFDL-EEILDLCHTDGGHIVSWLHEN 232
>gi|237843887|ref|XP_002371241.1| replication factor C subunit, putative [Toxoplasma gondii ME49]
gi|211968905|gb|EEB04101.1| replication factor C subunit, putative [Toxoplasma gondii ME49]
gi|221483809|gb|EEE22121.1| replication factor C subunit, putative [Toxoplasma gondii GT1]
gi|221504190|gb|EEE29865.1| replication factor C subunit, putative [Toxoplasma gondii VEG]
Length = 336
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 46/253 (18%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
++S++ +W EKY+P +L+++ + + +R E G+ L++ G G
Sbjct: 25 TSSTTLDSIWIEKYRPETLDDVVGNDQVMRRLRIIARE--GNMPH------LMLAGPPGT 76
Query: 190 GKTATVRQIASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
GKT++V + L G+R W+ Y E T + E+++ +
Sbjct: 77 GKTSSVLCLCKQLLGSR-----------WRAYTLELNASDERT-----IDVIREKVKHFA 120
Query: 249 STSPSIP-GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
+P G K I+++D++ A + LR+ + +T A
Sbjct: 121 KEKRDLPAGRHK---IVILDEVDAMT-EAAQQALRRIMEQFSDTTRFALAC--------- 167
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
+S+A E LQS RK + + + R L ++C E ++ + I+ +
Sbjct: 168 --NSSASVIEPLQSRCAILRFRK-----LDDSQLVRRLRQVCAMEALQVTDDGIEAIVFC 220
Query: 368 SGGDIRQAITSLQ 380
+ GD+R A+ +LQ
Sbjct: 221 ADGDMRSALNNLQ 233
>gi|430742756|ref|YP_007201885.1| AAA ATPase [Singulisphaera acidiphila DSM 18658]
gi|430014476|gb|AGA26190.1| AAA ATPase [Singulisphaera acidiphila DSM 18658]
Length = 431
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 121/307 (39%), Gaps = 66/307 (21%)
Query: 140 AEKYKPRSLEELAVQRKKVEE---VRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
AE+ +PR+++E Q+ E VR E D L++ G G GKT R
Sbjct: 30 AERMRPRTIDEFVGQQHLTGEGKLVRRLIE-------DPGPLPSLILWGGPGTGKTTLGR 82
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A AR P + L L E +R RR G +
Sbjct: 83 LLAQRAHARF----VPLSAV-----------LSGVKDLREAVVEAKRQRRGGRRT----- 122
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ-- 314
+L ID++ F + +Q LL P+ E G V +T +
Sbjct: 123 ------VLFIDEI------HRFNKSQQDALL-------PS----VEDGTVSLVGATTENP 159
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKIC-------RQEQYSLSTEQIDLVAQA 367
SFE ++L + +R + LNP+ I L + R Q +S E + L+A +
Sbjct: 160 SFEVNSALL--SRSRVLILNPLGEEEISEILRRAMLDPERGLRAHQVMMSDEDMRLLAHS 217
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
+GGD R A+T+L ++ +P + S I + E A G F+ G ++ +L A
Sbjct: 218 AGGDARVALTALDAATRATEPGSDGSRRIDRETLVE--ALGRSRFAYDKGGEDHYNLASA 275
Query: 428 LGKFLHN 434
L K L N
Sbjct: 276 LIKSLRN 282
>gi|363751222|ref|XP_003645828.1| hypothetical protein Ecym_3534 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889462|gb|AET39011.1| Hypothetical protein Ecym_3534 [Eremothecium cymbalariae
DBVPG#7215]
Length = 332
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 100/261 (38%), Gaps = 67/261 (25%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EKY+P L+E+ Q + VE VR + +E RL L+ G G GKT+T+
Sbjct: 13 WIEKYRPERLDEVYGQTRVVETVRKFAQEGRLPH---------LLFYGPPGTGKTSTISA 63
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
+A + + Y K LE + D + V +I+ + ST
Sbjct: 64 LAREIYGKNYR----------------KMVLELNASDDRGIDVVRNQIKEFASTRQIF-- 105
Query: 257 ESKSSAILLID--DLPVTNGRTAFERL--------RQCLLLLVRSTHIPTAVVLTECGKA 306
SK ++++D D + + A R+ R C +L H T +L+ C
Sbjct: 106 -SKGFKLIILDEADAMTSAAQNALRRIIERFTKNTRFC--ILANYAHKLTPALLSRCT-- 160
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ P+ SI+R + + E +L+ + + +
Sbjct: 161 -----------------------RFRFQPVPAQSIERCVLNVMAHEHLTLAEDARRALLR 197
Query: 367 ASGGDIRQAITSLQFSSLKQD 387
+ GD+R+A+ LQ S D
Sbjct: 198 LANGDMRKALNVLQASKATLD 218
>gi|219852349|ref|YP_002466781.1| replication factor C large subunit [Methanosphaerula palustris
E1-9c]
gi|219546608|gb|ACL17058.1| AAA ATPase central domain protein [Methanosphaerula palustris
E1-9c]
Length = 451
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 111/262 (42%), Gaps = 44/262 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P + +L + ++ W SK L++ G+ G GKT++ +
Sbjct: 5 WTEKYRPEHIRDLTGNAPAIRQMVDWAASWSKKSKP------LLLYGKPGTGKTSSAYAL 58
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + +W+ +E + + ++RI GSTS S+ G +
Sbjct: 59 ANDM-----DWEM----------------IELNASDQRTKGAIDRIAGQGSTSGSLTGAA 97
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++L+D+ G TA + ++ L+R ++ P ++ + ++ ++ E
Sbjct: 98 HK--LILLDEADNLQG-TADRGGARAIVDLIRQSYQPLILIANDIY---ALPGEIKTRCE 151
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L V + SI L IC E + E + +A ++ GD+R A+ +
Sbjct: 152 L-----------VQFKALQARSIVPRLRFICASEGIICADEALHEIAGSTRGDLRAAVNA 200
Query: 379 LQFSSLKQDPMLNLSLSISKPN 400
L +++ +D + + S+ S+ +
Sbjct: 201 LYATAIGRDHLDSASIHTSQKD 222
>gi|432959658|ref|XP_004086351.1| PREDICTED: replication factor C subunit 2-like [Oryzias latipes]
Length = 355
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 50/246 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L E+ + V + + E G+ + ++I G G GKT ++ +
Sbjct: 39 WVEKYRPLKLNEIVGNEETVSRLEVFARE--GNVPN------IIIAGPPGTGKTTSILCL 90
Query: 199 A-SHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A + LG+ + + LE + D + V +I+ + ++P
Sbjct: 91 ARALLGSAMKD-----------------AVLELNASNDRGIDVVRNKIKMFAQQKVTLP- 132
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ + I+L + +T+G A + LR+ + + ++T A C +D +
Sbjct: 133 KGRHKIIILDEADSMTDG--AQQALRRIMEIYSKTTRFALA-----CNASDKI------I 179
Query: 317 EELQSILVDAGARKVALN--PITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +QS R L +T+G I L ++ +E+ S+S + ++ V S GD+RQ
Sbjct: 180 EPIQS-------RCAVLRYAKLTDGQILSRLQEVIEKERLSVSDDGLEAVIFTSQGDMRQ 232
Query: 375 AITSLQ 380
A+ +LQ
Sbjct: 233 ALNNLQ 238
>gi|399218566|emb|CCF75453.1| unnamed protein product [Babesia microti strain RI]
Length = 1217
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAW------FEERLGDSKDKFSTNVLVITGQAGVG 190
QLW +KYKP +L K E W EER G+ + +L++ G GVG
Sbjct: 572 QLWVDKYKPLYFSDLLSDEKVNREALCWLNSWKNLEERGGEPR------ILILGGPPGVG 625
Query: 191 KTATVRQIASHLGARLYE 208
K+ V IA H + E
Sbjct: 626 KSTLVHVIARHSNYNVVE 643
>gi|242010739|ref|XP_002426116.1| Replication factor C subunit, putative [Pediculus humanus corporis]
gi|212510163|gb|EEB13378.1| Replication factor C subunit, putative [Pediculus humanus corporis]
Length = 338
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 49/255 (19%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P + +++ + + A+ E +G+ + ++I G GVGKT T+ +
Sbjct: 21 WIEKYRPVTFKDVVGNDDAIRRLAAFAE--VGNVPN------ILIAGPPGVGKTTTILCL 72
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE-FENFVERIRRYGSTSPSIPGE 257
A L ++ + LE + D + +I+ + ++P +
Sbjct: 73 ARILLGPSFK----------------EAVLELNASNDRGIDTVRNKIKMFAQQKVTLP-K 115
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K I+L + +T+G A + LR+ + + ++T A + + +++ E
Sbjct: 116 GKHKIIVLDEADSMTDG--AQQALRRTMEMYSQTTRF-----------AFACNDSSKIIE 162
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
LQS + + + I + L +IC EQ S + + ++ V ++ GD+RQA+
Sbjct: 163 PLQS-----RCAVLRFTKLKDEEILKKLLQICESEQISYTNDGLEAVIFSAQGDLRQALN 217
Query: 378 SLQ-----FSSLKQD 387
+LQ FS + D
Sbjct: 218 NLQSTHNGFSHVNSD 232
>gi|301753136|ref|XP_002912391.1| PREDICTED: ATPase family AAA domain-containing protein 5-like
[Ailuropoda melanoleuca]
Length = 1848
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER--------- 168
DS S LW EKY+P++ EL ++++ +W EER
Sbjct: 1045 DSCKDSGIEDMLWTEKYQPQNSSELIGNELAIKKLHSWLKDWKKRAELEERQNLKGKKDE 1104
Query: 169 ----LGDSKD-KFST---------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1105 KLEDLSDSIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1158
>gi|430005508|emb|CCF21309.1| putative ATPase, AAA family [Rhizobium sp.]
Length = 279
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE--YMHNCKTGLEYTSKLDEFE 238
L++ G+ G GKT RQIAS LG L EW+ + T Q+ Y ++ + L + DE
Sbjct: 29 LLVKGEPGAGKTELARQIASALGLDLIEWNVKSTTKAQQGLYEYDAVSRLRDSQLGDERV 88
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDL 269
N V R G + K+ +LLID++
Sbjct: 89 NDVRNYIRQGKLWQAFAAPQKT--VLLIDEI 117
>gi|424863328|ref|ZP_18287241.1| DNA polymerase III subunit tau [SAR86 cluster bacterium SAR86A]
gi|400757949|gb|EJP72160.1| DNA polymerase III subunit tau [SAR86 cluster bacterium SAR86A]
Length = 520
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEE-VRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
++ A KY+P+S +E+ Q+ V+ + + +E++ + + +G GVGKT
Sbjct: 4 EVLARKYRPKSFKEVIGQKHVVQALINSIEQEKVHQA--------YIFSGTRGVGKTTIA 55
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-------SKLDEFENF-VERIRRY 247
R +A L + TP P + C +E + ++D N VE++R
Sbjct: 56 RILAKCLNCESSDKPTPNPC------NKCSNTMEISLGRSVDFLEIDAASNTQVEKVREL 109
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKAD 307
T P + + I LID++ + + +F L + L P + L +
Sbjct: 110 IETVEYKPAKGRYK-IYLIDEVHML-SKASFNALLKTL-----EEPPPHVIFLFATTNPE 162
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
++ T QS ++ L +++ + KI + E+ E + ++A +
Sbjct: 163 NIPKTVQS-----------RCLQLNLKTVSDELLIDHFKKILKNEKIKHDEESLIMIANS 211
Query: 368 SGGDIRQAITSL 379
+ G +R +T L
Sbjct: 212 ANGSVRDGLTLL 223
>gi|321454581|gb|EFX65746.1| hypothetical protein DAPPUDRAFT_303531 [Daphnia pulex]
Length = 343
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 45/256 (17%)
Query: 127 DSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITG 185
DS+ S + W EKY+P + E+ V + + E G++ + ++I G
Sbjct: 12 DSSKISGRKDNMPWVEKYRPTTFGEIVGNEDAVGRLEVFARE--GNTPN------IIIAG 63
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RI 244
GVGKT T+ +A L Y+ + LE + + + V +I
Sbjct: 64 PPGVGKTTTILCLARTLLGPNYK----------------EAVLELNASNERGIDVVRNKI 107
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
+ + ++P + + ++L + +T G A + LR+ + L ++T A C
Sbjct: 108 KMFAQQKVTLP-KGRQKIVILDEADSMTEG--AQQALRRTMELFSKTTRFALA-----CN 159
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
+D + QS + ++ G +T+ I + + ++C+ E+ S + + ++ +
Sbjct: 160 TSDKIIEPIQS----RCAMIRYGK-------LTDAQILQKMIEVCKLEKVSHTDDGLEAI 208
Query: 365 AQASGGDIRQAITSLQ 380
+ GD+RQ + +LQ
Sbjct: 209 VFTAQGDLRQGLNNLQ 224
>gi|304314451|ref|YP_003849598.1| replication factor C, large subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302587910|gb|ADL58285.1| replication factor C, large subunit [Methanothermobacter
marburgensis str. Marburg]
Length = 470
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W EKY+PR+ EE+A +K + E++ W + G+ + L++ G G GKT
Sbjct: 3 WTEKYRPRTFEEVAGNQKAIAEIKKWISGWKAGEPQPP-----LLLVGPPGTGKTTM--- 54
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+H+ R + DT LE + ++ + +R G S +
Sbjct: 55 --AHIIGREFS-DT----------------LELNASDKRSQDAI--MRTAGEASATRSLF 93
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++++D++ +G ++ +L S H +VLT + +
Sbjct: 94 NHDLKLIILDEVDGIHGNEDRGGVQAINRILRESRH---PIVLT---------ANDPYSK 141
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
LQSI + + + + SI L +ICR E + + +A+ S GD+R AI
Sbjct: 142 RLQSI--KPKCKVINIRKVHTSSIAAALKRICRAEGIDCPDDVLKELAKRSHGDLRSAIN 199
Query: 378 SLQ 380
L+
Sbjct: 200 DLE 202
>gi|223038447|ref|ZP_03608741.1| ATPase, AAA family protein [Campylobacter rectus RM3267]
gi|222880304|gb|EEF15391.1| ATPase, AAA family protein [Campylobacter rectus RM3267]
Length = 394
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 121/298 (40%), Gaps = 62/298 (20%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
Q +A K++PRSL+E+ QR+ V + + E + K ++ G AG GKT+ R
Sbjct: 2 QNFALKFRPRSLDEICGQRELVGVFKKFIENK------KIPHSIFY--GPAGCGKTSFAR 53
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPG 256
+A + YE+D I +E+ K + + L + F++ I R T
Sbjct: 54 VVARSMEYDFYEFDGGNLKI-EEFRKILKN---HENALSKPLFFIDEIHRLSKT------ 103
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ A+L +P+ N R A ++ ST P + + + S + F
Sbjct: 104 --QQEALL----IPMENYRAA---------IIGASTENPYFTL------SSGIRSRSMLF 142
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E P+ + ++ L ++ + ++ +S E + ++SGGD R +
Sbjct: 143 E---------------FKPLASEDFEKLLERVRGEVKFDISDEAKAYLIKSSGGDARGLL 187
Query: 377 TSLQFSSLKQDPMLNLSLSISKPNFPEEKA---DGHGGFSIQF-----GRDETLSLFH 426
L+F+ + + +L + N E D H G + F G DE +++
Sbjct: 188 NLLEFAVSLGEEITLANLKTLRANAVSEGVSEDDVHYGLASAFIKSLRGSDENAVIYY 245
>gi|427781667|gb|JAA56285.1| Putative replication factor c activator 1 2 [Rhipicephalus
pulchellus]
Length = 337
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P E+ + + + + S++ NV +++G GVGKT T+ +
Sbjct: 21 WVEKYRPVKFTEIVGNEETIARLEVF-------SREGNVPNV-ILSGPPGVGKTTTILCL 72
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPGE 257
A L + + LE + D + V +I+ + ++P
Sbjct: 73 ARILLGPAFR----------------EAVLELNASNDRGIDVVRNKIKMFAQKKVTLP-P 115
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K I+L + +T G A + LR+ + + ++T A C +D + E
Sbjct: 116 GKHKIIILDEADSMTEG--AQQALRRTMEIYSKTTRFALA-----CNTSDKI------IE 162
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
+QS V + +T+ + L +C++E S S + ++ + + GD+RQAI
Sbjct: 163 PIQS-----RCAVVRFSRLTDAQVLAKLLDVCQRENASYSEDGLEALVFTAQGDMRQAIN 217
Query: 378 SLQ 380
+LQ
Sbjct: 218 NLQ 220
>gi|119196513|ref|XP_001248860.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392861939|gb|EAS37458.2| replication factor C subunit 4 [Coccidioides immitis RS]
Length = 352
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
++A A + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 NAAGAPPDYELPWVEKYRPVFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIR 245
G+GKT ++ +A + +Y+ + LE + + + V RI+
Sbjct: 70 PGIGKTTSILCLARQMLGDVYK----------------EAVLELNASDERGIDVVRNRIK 113
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ ++P K ++L + +T+G A + LR+ + + +T A C +
Sbjct: 114 GFAQKKVTLP-PGKHKLVILDEADSMTSG--AQQALRRTMEIYSATTRFAFA-----CNQ 165
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
++ + E LQS + + +T+ + + L +IC E S + I +
Sbjct: 166 SNKI------IEPLQS-----RCAILRYSRLTDAQVVKRLMQICEAEDVKYSDDGIAALV 214
Query: 366 QASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 215 FSAEGDMRQAINNLQ 229
>gi|55378501|ref|YP_136351.1| replication factor C large subunit [Haloarcula marismortui ATCC
43049]
gi|57013000|sp|Q5V1F7.1|RFCL_HALMA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|55231226|gb|AAV46645.1| replication factor C large subunit [Haloarcula marismortui ATCC
43049]
Length = 508
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 98/242 (40%), Gaps = 42/242 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P +L E+ K + ++ W E D ++ +++ G G+GKT+ +
Sbjct: 3 WTEKYRPTTLSEVRGNDKARDALKKWA-ETWDDHRE-----AVILYGSPGIGKTSAAHAL 56
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A+ + EW PTI E + ++ + R+ + S ++
Sbjct: 57 ANDM-----EW----PTI------------ELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
++++D+ +G R + LV+ P ++ E + E
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGAR-AITALVKEASQPMILIANE-------------YYE 141
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+ + L + + + ++ SI L +CRQE ++ + +A+ + G +R A+
Sbjct: 142 MSNGLRN-NCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQELAEQNSGGLRGAVKD 200
Query: 379 LQ 380
LQ
Sbjct: 201 LQ 202
>gi|328352524|emb|CCA38923.1| Cell division protease ftsH [Komagataella pastoris CBS 7435]
Length = 407
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 112/304 (36%), Gaps = 78/304 (25%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY PR +E +A K ++ + G G GK+ R +
Sbjct: 25 WIEKYAPRKIESIAGLIK-----------------------IIFLVGPTGTGKSTVARAV 61
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL--DEFENFVERIRRYGSTSPSIPG 256
+ L ++ + + L+Y S + F F++ I
Sbjct: 62 SRLLLNEVFGKNEGLDRV-----------LDYESGKGSEHFAKFLQECL--------ILT 102
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLL--LLVRSTHIPTAVVLTECGKADSVDSTAQ 314
+K++ +++DDLP + E+ LL L R P + ++E + + + +
Sbjct: 103 HTKTAKSIIVDDLPNLSNDVTREKTSSALLRWLDYRGLTPPLIICVSENSQGEEANQYVE 162
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ Q +L + ++ N +T +++ L I R E + DL + +S GDI
Sbjct: 163 KMFDKQ-VLNHSKVVRINFNKVTQKILEKVLKNILRNE----GAQCKDLQSFSSMGDISS 217
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHALGKFLHN 434
AI + E+ HG + +D+ + LF A+GK L+
Sbjct: 218 AINGM------------------------EQNVKHGFSDV---KDDDIGLFDAIGKVLYG 250
Query: 435 KRET 438
R +
Sbjct: 251 SRNS 254
>gi|393244589|gb|EJD52101.1| replication factor C subunit 4 [Auricularia delicata TFB-10046 SS5]
Length = 340
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + ++ ++ E G+ ++I+G G+GKT ++ +
Sbjct: 21 WVEKYRPLKLDDVVGNKDTIDRLKVIARE--GNCPH------IIISGLPGIGKTTSIHCL 72
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--FENFVERIRRYGSTSPSIPG 256
A L Y K G+ + DE + +I+ + ++P
Sbjct: 73 AHELLGDAY-----------------KEGVLELNASDERGIDVVRNKIKMFAQKKVTLP- 114
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ + ++L + +T+G A + LR+ + + +T A C +++ + QS
Sbjct: 115 KGRHKFVILDEADSMTSG--AQQALRRTMEIYSNTTRFALA-----CNQSNKIIEPIQS- 166
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+IL A R N I L +IC++E + + + I+ + + GD+RQAI
Sbjct: 167 --RCAILRYAKLR--------NEEIVARLLEICKEESVTYNQDGIEALVFTAEGDMRQAI 216
Query: 377 TSLQ 380
+LQ
Sbjct: 217 NNLQ 220
>gi|219127681|ref|XP_002184059.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404290|gb|EEC44237.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 349
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 42/244 (17%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR LE++ + V +RA R G+ + L++ G G GKT +V +
Sbjct: 34 WVEKYRPRVLEDVVGNEETVSRLRAI--SRTGNLPN------LILAGPPGTGKTTSVHAL 85
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGES 258
A L Y+ + + + + +D N ++ T P PG
Sbjct: 86 ARQLLGASYK-----DAVLELNASDAR-------GIDVVRNRIKSFAMNKVTLP--PGRH 131
Query: 259 KSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEE 318
K I+++D+ A + LR+ + L +T A + + + E
Sbjct: 132 K---IIILDEADSMTS-AAQQALRRTMELYSNTTRFCLA-----------CNVSTKIIEA 176
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
+QS A + + + N + L K+C+ E S + + ++ + + GD+R A+ +
Sbjct: 177 IQS-----RAAILRYSRLANEQVLTCLLKVCQAESISYTNDALEAILFTAEGDMRHALNN 231
Query: 379 LQFS 382
LQ S
Sbjct: 232 LQAS 235
>gi|119719185|ref|YP_919680.1| replication factor C small subunit [Thermofilum pendens Hrk 5]
gi|150415673|sp|A1RWU7.1|RFCS_THEPD RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|119524305|gb|ABL77677.1| replication factor C small subunit [Thermofilum pendens Hrk 5]
Length = 325
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 135/324 (41%), Gaps = 58/324 (17%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+++LW EKY+PRSL+E+ Q + V+ ++ + + + + L+ G G GKT
Sbjct: 2 SEELWVEKYRPRSLDEIVDQEEIVKRLKEFVKNK--------NMPHLLFAGPPGTGKTTA 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP-- 252
+A L + +T E + + G++ RI+ Y T P
Sbjct: 54 ALALAHDLYGESWRDNT------LELNASDERGIDVIRS---------RIKDYARTLPIG 98
Query: 253 SIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDST 312
+P + ++++D+ G A + LR+ + L R+T +L +
Sbjct: 99 DVPFK-----LVILDEADNMTG-DAQQALRRTMELFSRNTRF----ILI-------ANYA 141
Query: 313 AQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
++ E +QS P+ G + L I +QE ++ ++ + + S GD+
Sbjct: 142 SKIIEPIQS-----RCAVFRFQPLPKGDAFQRLRWIAQQEGITVDDGALEAIWEESQGDL 196
Query: 373 RQAITSLQFSSLKQ----DPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHAL 428
R+AI +LQ +S + ++ +L KP E + ++ RD+ L +
Sbjct: 197 RKAINTLQAASAISRNVTEEVVYAALGRVKPKEVREMIESALKGNLLEARDKLRLLLYNY 256
Query: 429 G-------KFLHNKRETDNLVKMD 445
G +F+H + + V++D
Sbjct: 257 GLSGVDIIRFIHREVLSQKSVRLD 280
>gi|428672451|gb|EKX73365.1| replication factor RFC1 C terminal domain containing protein
[Babesia equi]
Length = 962
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/273 (17%), Positives = 113/273 (41%), Gaps = 52/273 (19%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE--------------ERL 169
P + A S+ EKY+P++L +L +K ++++ W +R+
Sbjct: 459 PTVSATHAQESSYLPLTEKYRPKTLADLIGNKKSIDKLCDWLATWDKVHKKGIKNPVKRI 518
Query: 170 GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE 229
G + ++ +++G G+GKT + +A H + + C +E
Sbjct: 519 GYKVENVNSKCALLSGSPGIGKTTCAKLVAEH------------------FKYTC---VE 557
Query: 230 YTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLL 288
+ + + +E+I + ++ S+ ++L+D++ +G ++ +R +L L
Sbjct: 558 FNASDFRSKAAIEKIALMATGGQTLGSTGVSNTLILLDEV---DGISSGDRGGIPAVLSL 614
Query: 289 VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI 348
+ ST P V + +SF+++ ++ + + T + +I
Sbjct: 615 IDSTKCPIICVCND-----------KSFQKMSGLV--NKCYDIKFSSPTEDQFAARVRRI 661
Query: 349 CRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
C E+ + +++ + + S GD+R + +QF
Sbjct: 662 CTIEKIEIPEKRLSELYEQSNGDLRYTLNYIQF 694
>gi|324501627|gb|ADY40722.1| Chromosome transmission fidelity protein 18 [Ascaris suum]
Length = 815
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 107/285 (37%), Gaps = 61/285 (21%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELA----VQRKKVEEVRAW----FEERLGDS------ 172
DS S+S+ TQ LW EKY PRS +L V R ++ ++ W F+ + DS
Sbjct: 211 DSVSSSAHTQ-LWVEKYAPRSFVDLISDDRVNRFLLKWLKLWDECVFKRSIPDSMLKSGE 269
Query: 173 -KDKF-----------STNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEY 220
+D S V++I G AG GKT A H G R+ E + ++
Sbjct: 270 DRDDIITLDNGKPRRPSQKVVLIAGPAGFGKTTLASVTARHCGYRVVEMNASDDRNVSDF 329
Query: 221 MHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER 280
+ + LD + P LL+D++ +G A
Sbjct: 330 ERKIEGAIRSVRTLD---------------TDGRPN------CLLVDEI---DGAPADAI 365
Query: 281 LRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGS 340
C L +R V+ C S EL+S+ A + +
Sbjct: 366 RYLCKTLALRGRKAIRRPVICICNNL-----YVPSLRELRSV-----ALVLQMPHSEQHR 415
Query: 341 IKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLK 385
++R L +I R E + T + + D+R +I +LQF +++
Sbjct: 416 LERRLLQIARCEHIRIETGAVAEIINICAQDLRSSINALQFIAVE 460
>gi|327401750|ref|YP_004342589.1| replication factor C small subunit [Archaeoglobus veneficus SNP6]
gi|327317258|gb|AEA47874.1| Replication factor C small subunit [Archaeoglobus veneficus SNP6]
Length = 322
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 102/249 (40%), Gaps = 47/249 (18%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
++W EKY+PR+L+E+ Q + ++ + + E + + L+ G G GKTA+
Sbjct: 6 EIWVEKYRPRTLKEVVGQEEVIQRLMGYVERK--------NIPHLLFAGPPGTGKTASAI 57
Query: 197 QIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--FENFVERIRRYGSTSPSI 254
+A L + N + + DE + +I+ + T+P
Sbjct: 58 ALARDL-----------------FGENWRDNFIEMNASDERGIDVVRHKIKEFARTAPI- 99
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
G++ I L + +T A R R+ + + + C S + ++
Sbjct: 100 -GDAPFKIIFLDEADALTPDAQAALR---------RTMEMYSKI----CRFILSCNYVSR 145
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +QS P+ ++++ L +IC E ++ + ++ + S GD R+
Sbjct: 146 IIEPIQS-----RCAVFKFRPVPPEAMRKRLLEICENEGVKITEDGLEALIYVSNGDFRK 200
Query: 375 AITSLQFSS 383
AI +LQ ++
Sbjct: 201 AINALQGAA 209
>gi|392331827|ref|XP_003752395.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Rattus
norvegicus]
gi|392351408|ref|XP_003750916.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Rattus
norvegicus]
Length = 1783
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 34/116 (29%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER--------- 168
D + S + LW EKY+P++ EL ++++ +W EER
Sbjct: 982 DPSKESGTEDMLWTEKYQPQNSNELVGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDE 1041
Query: 169 -------LGDSKD-KFST--------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L D D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1042 KEEGILNLSDGTDFKGSSDDEEYRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1097
>gi|391337930|ref|XP_003743317.1| PREDICTED: replication factor C subunit 2-like [Metaseiulus
occidentalis]
Length = 322
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 46/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P E+ + V + + R G+ + +++ G GVGKT T+ +
Sbjct: 7 WVEKYRPEKFTEIVGNEETVARLEVF--SRQGNVPN------IILCGPPGVGKTTTILCL 58
Query: 199 ASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A L G+ E LE + D + V +I+ + T ++P
Sbjct: 59 ARLLLGSSFRE-----------------AVLELNASNDRGIDVVRNKIKMFAQTKVTLP- 100
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I+L + +T G A + LR+ + ++T A C +D +
Sbjct: 101 PGRHKIIILDEADSMTEG--AQQALRRTMENFSKTTRFALA-----CNTSDKI------I 147
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E +QS + +++ + + ICR+E S + + ++ + + GD+RQAI
Sbjct: 148 EPIQS-----RCAVIRFGKLSDAQVLAKIIDICRKENVSYAEDGLEALVYTAQGDMRQAI 202
Query: 377 TSLQ 380
+LQ
Sbjct: 203 GNLQ 206
>gi|302690912|ref|XP_003035135.1| hypothetical protein SCHCODRAFT_52161 [Schizophyllum commune H4-8]
gi|300108831|gb|EFJ00233.1| hypothetical protein SCHCODRAFT_52161 [Schizophyllum commune H4-8]
Length = 376
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 94/249 (37%), Gaps = 35/249 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQAGVGKTAT 194
Q W EKY+P+++++++ Q V ++ K STN+ ++ G G GKT+T
Sbjct: 29 QPWVEKYRPKTIDDVSAQEHTVSVLQ----------KALTSTNLPHMLFYGPPGTGKTST 78
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+ L +L+ D + + + + K+ F R + S
Sbjct: 79 ILA----LSRQLFGPDNFRSRVLELNASDERGISIVREKVKNFARQTPRAQAVASDGKEY 134
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
P IL D + + A R+ + TH C +
Sbjct: 135 PCPPYKIIILDEADSMTQDAQGALRRIME--------THARITRFCLVCNYVTRI----- 181
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E L S K P+ + S LS I E ++S ID + SGGD+R+
Sbjct: 182 -IEPLAS-----RCSKFRFTPLDSSSAAARLSYIATNENVAVSPPVIDTLISTSGGDLRR 235
Query: 375 AITSLQFSS 383
AIT LQ +S
Sbjct: 236 AITYLQSAS 244
>gi|222616174|gb|EEE52306.1| hypothetical protein OsJ_34316 [Oryza sativa Japonica Group]
Length = 929
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 83 SSSRQQLWTNKNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEK 142
+S +QQ K+ P +E + G+ ++P +G + D+ + W EK
Sbjct: 343 NSEKQQKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSLQWTEK 402
Query: 143 YKPRSLEELAVQRKKVEE----VRAWFEERL-----GDSK---DKFSTNVLVITGQAGVG 190
Y+P+ ++ + V++ +R+W ++ L G K D + ++++G G+G
Sbjct: 403 YRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLLSGPPGIG 462
Query: 191 KTATVRQIASHLGARLYE 208
KT T + ++ LG + E
Sbjct: 463 KTTTAKVVSQMLGLQAIE 480
>gi|320040647|gb|EFW22580.1| DNA replication factor C subunit [Coccidioides posadasii str.
Silveira]
Length = 352
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
++A A + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 NAAGAPPDYELPWVEKYRPVFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIR 245
G+GKT ++ +A + +Y+ + LE + + + V RI+
Sbjct: 70 PGIGKTTSILCLARQMLGDVYK----------------EAVLELNASDERGIDVVRNRIK 113
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ ++P K ++L + +T+G A + LR+ + + +T A C +
Sbjct: 114 GFAQKKVTLP-PGKHKLVILDEADSMTSG--AQQALRRTMEIYSATTRFAFA-----CNQ 165
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
++ + E LQS + + +T+ I + L +IC E S + I +
Sbjct: 166 SNKI------IEPLQS-----RCAILRYSRLTDAQIVKRLMQICEAEDVKHSDDGIAALV 214
Query: 366 QASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 215 FSAEGDMRQAINNLQ 229
>gi|345805792|ref|XP_548276.3| PREDICTED: ATPase family AAA domain-containing protein 5 [Canis lupus
familiaris]
Length = 1851
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 32/109 (29%)
Query: 132 SSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL------------- 169
S + LW EKY+P++ EL ++++ +W EER
Sbjct: 1046 SGTEDMLWTEKYQPQNSNELIGNELAIKKLHSWLKDWKKRAELEERQNLKGKKDEKQEDL 1105
Query: 170 -------GDSKDKFST---NVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S D+ T N ++ITG GVGKTA V A LG +++E
Sbjct: 1106 LDSIDFKGSSDDEEETRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1154
>gi|396080823|gb|AFN82444.1| replication factor C large subunit [Encephalitozoon romaleae
SJ-2008]
Length = 383
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 65/246 (26%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
+WAEKY+P+ +L + E W + + +L+I G G GKT+ V
Sbjct: 5 VWAEKYRPQKYTDLVFKGGVHHEALKWLRDYPNHGR------ILLINGPPGTGKTSLVHI 58
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
++S G L E+ N G + +D+ N YG+ +
Sbjct: 59 LSSVFGLNLIEF-------------NASNG---SGCVDKILNV------YGTVN------ 90
Query: 258 SKSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
K + IL+ ID LP + T L+ ST + VV+ S
Sbjct: 91 GKKNLILIDEIDSLPSVDVET-----------LISSTKLIYPVVMI---------SNEMH 130
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
E++ ++ + + +++ + ++C++E ++ + + + S GD R
Sbjct: 131 LEDVYTMEIKRPGIE---------EVRKCIERVCKEEMVNVDNSALSQLVEDSDGDFRAI 181
Query: 376 ITSLQF 381
I LQ
Sbjct: 182 INYLQI 187
>gi|448528737|ref|XP_003869741.1| Rad24 protein [Candida orthopsilosis Co 90-125]
gi|380354095|emb|CCG23608.1| Rad24 protein [Candida orthopsilosis]
Length = 532
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 131/337 (38%), Gaps = 87/337 (25%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVR-AWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
W KY PR+ E+ + K+ +V+ A + + +SK T VLV+ G G K+ T++
Sbjct: 47 WLTKYAPRTTSEICINPTKLTQVKNALYRMKTRESK----TKVLVLVGPCGSSKSTTIKL 102
Query: 198 IASHLGA------RLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTS 251
+A + RL E+D + I Q ++ +CK
Sbjct: 103 LAREINNADVFDDRLIEYDE-SENITQ-FLQSCKY------------------------- 135
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLL-LLVRSTHIPTAVVLTECGKADSVD 310
K+ A++LI++LP R + + + +P V+ + +S D
Sbjct: 136 -------KTQAVVLIEELPNVYHEDTLREFRDTIKHWIFAAVALPPLVICISEFEYES-D 187
Query: 311 STAQSFEELQS-----------ILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
T Q F L++ +L + NP+ +K+T++ I + E + +
Sbjct: 188 RT-QFFYGLENNMTSDTLLGRELLSYPEVETIRFNPLATRFLKKTVNSILKSEGLTKISN 246
Query: 360 QIDLVAQASG----GDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQ 415
+ S GDIR I LNL + + F + D
Sbjct: 247 DAKFDSFLSELFKVGDIRSII-------------LNLEMWVK---FYKSGVD-------- 282
Query: 416 FGRDETLSLFHALGKFLHNKRETDNLVKMDQDAFVVK 452
+ R+ + +FHA+GK +++ ++ + V+ + V +
Sbjct: 283 YNRENAIGIFHAIGKVIYSSKKFEGDVQTTNNKTVTQ 319
>gi|39933692|ref|NP_945968.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas
palustris CGA009]
gi|39647538|emb|CAE26059.1| possible DNA polymerase III tau subunit [Rhodopseudomonas palustris
CGA009]
Length = 623
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 37/259 (14%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQ 186
SASA + ++ A KY+P S ++L Q V V F+ R+ ++TG
Sbjct: 19 SASAPAGAYRVLARKYRPNSFDDLIGQEAVVRTVSNAFDTGRI--------PQAWILTGV 70
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQE-YMHNCKTGLEYTSKLDEFE------N 239
GVGKT T R +A L L + PTI + +CK +E + +D E
Sbjct: 71 RGVGKTTTARILARALNYELPDGSVKGPTIHMPVHGVHCKAIME-SRHMDVLEMDAASHT 129
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVV 299
V+ +R+ + P ++ + +ID++ + + AF + L H
Sbjct: 130 GVDDVRQINDSVRYAPASARYK-VYIIDEVHMLST-AAFNAFLKT--LEEPPEHAKFVFA 185
Query: 300 LTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
TE K +V S Q F+ R+V + + N LS I ++E +
Sbjct: 186 TTEIRKVPVTVLSRCQRFD----------LRRVEADVLMN-----HLSNIAQKEGVEVEP 230
Query: 359 EQIDLVAQASGGDIRQAIT 377
E + +VA+A+ G +R +++
Sbjct: 231 EALGIVARAAEGSVRDSLS 249
>gi|192289049|ref|YP_001989654.1| DNA polymerase III subunits gamma and tau [Rhodopseudomonas
palustris TIE-1]
gi|192282798|gb|ACE99178.1| DNA polymerase III, subunits gamma and tau [Rhodopseudomonas
palustris TIE-1]
Length = 623
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 37/259 (14%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQ 186
SASA + ++ A KY+P S ++L Q V V F+ R+ ++TG
Sbjct: 19 SASAPAGAYRVLARKYRPNSFDDLIGQEAVVRTVSNAFDTGRI--------PQAWILTGV 70
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQE-YMHNCKTGLEYTSKLDEFE------N 239
GVGKT T R +A L L + PTI + +CK +E + +D E
Sbjct: 71 RGVGKTTTARILARALNYELPDGSVKGPTIHMPVHGVHCKAIME-SRHMDVLEMDAASHT 129
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVV 299
V+ +R+ + P ++ + +ID++ + + AF + L H
Sbjct: 130 GVDDVRQINDSVRYAPASARYK-VYIIDEVHMLST-AAFNAFLKT--LEEPPEHAKFVFA 185
Query: 300 LTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
TE K +V S Q F+ R+V + + N LS I ++E +
Sbjct: 186 TTEIRKVPVTVLSRCQRFD----------LRRVEADVLMN-----HLSNIAQKEGVEVEP 230
Query: 359 EQIDLVAQASGGDIRQAIT 377
E + +VA+A+ G +R +++
Sbjct: 231 EALGIVARAAEGSVRDSLS 249
>gi|90419786|ref|ZP_01227695.1| DNA polymerase III, subunits gamma/tau [Aurantimonas manganoxydans
SI85-9A1]
gi|90335827|gb|EAS49575.1| DNA polymerase III, subunits gamma/tau [Aurantimonas manganoxydans
SI85-9A1]
Length = 639
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 49/264 (18%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQ 186
S + +++ ++ A KY+PRS ++L Q V + FE R+ + ++TG
Sbjct: 12 SEAGAAAPYRVLARKYRPRSFDDLIGQEPMVRTLTNAFETGRIAQA--------WMLTGV 63
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE------------YTSKL 234
GVGKT T R +A L + E D PT + + +H C+ +E + +
Sbjct: 64 RGVGKTTTARILARALNYQTDEIDQPTIHMGEPGIH-CQAIMEGRHVDVVEMDAASHTGI 122
Query: 235 DEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI 294
D+ + ++ RY S + +ID++ + + + AF L + L H+
Sbjct: 123 DDVREIIAQV-RYRPV-------SARYKVYIIDEVHMLSTQ-AFNGLLKT--LEEPPEHV 171
Query: 295 PTAVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ 353
TE K +V S Q F+ L + + ++ L+KI E
Sbjct: 172 KFVFATTEIRKVPVTVLSRCQRFD---------------LRRVESATLMAHLTKIATAEH 216
Query: 354 YSLSTEQIDLVAQASGGDIRQAIT 377
+ + + L+A+A+ G +R A++
Sbjct: 217 VEVDEDALRLIARAAEGSVRDALS 240
>gi|164658055|ref|XP_001730153.1| hypothetical protein MGL_2535 [Malassezia globosa CBS 7966]
gi|159104048|gb|EDP42939.1| hypothetical protein MGL_2535 [Malassezia globosa CBS 7966]
Length = 850
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STN---VLVITGQA 187
QLW KY P+ L EL + +V++++AW + K F +TN ++I+G
Sbjct: 269 QLWTSKYAPKQLRELIGNKAQVDKLQAWLRDWPKSRKAHFKKPGPHATNTFRAMLISGAP 328
Query: 188 GVGKTATVRQIASHLGARLYE 208
G+GKT V + + G E
Sbjct: 329 GIGKTTAVHLVCALEGYETLE 349
>gi|13541365|ref|NP_111053.1| replication factor C large subunit [Thermoplasma volcanium GSS1]
gi|42559520|sp|Q97BC2.1|RFCL_THEVO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|14324749|dbj|BAB59676.1| replication factor C subunit [Thermoplasma volcanium GSS1]
Length = 420
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 44/262 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
WA+KY+P+ +E+L V + +++++W + S K L++ G G GKT+ I
Sbjct: 3 WADKYRPKRIEDLIVSEEIRQKIQSWIDAWEEGSPKK---RALILYGVQGSGKTSAAYAI 59
Query: 199 ASHLGARLYEWDT----------PTPTIWQEYMHNCKTGLEYTSK---LDEFENFVERIR 245
A G + E + T + Y + SK +DE +N E
Sbjct: 60 AGTFGLPVVEMNASEQRNRESMKATALMASLYADLGASDFRKPSKVILIDEADNIFE--- 116
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
S +P G+ T G +E L +V+ T P + + + +
Sbjct: 117 ---SNNPKRGGD--------------TGG--VYE-----LSKIVKETRNPVIITMNDFYE 152
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPIT-NGSIKRTLSKICRQEQYSLSTEQIDLV 364
+ +++ +SI AR++ N +++ + I QE +SL + I+ +
Sbjct: 153 FRKKNYSSEVINNSESIEFKPYARRLDRNYNEFKKNVRNRIKWIINQEGFSLPDDIINSI 212
Query: 365 AQASGGDIRQAITSLQFSSLKQ 386
+ DIR I ++ +++ Q
Sbjct: 213 IDKNAPDIRSIINDVEAAAVSQ 234
>gi|124026832|ref|YP_001015947.1| DNA polymerase, gamma and tau subunits [Prochlorococcus marinus
str. NATL1A]
gi|123961900|gb|ABM76683.1| DNA polymerase, gamma and tau subunits [Prochlorococcus marinus
str. NATL1A]
Length = 565
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 53/279 (18%)
Query: 142 KYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASH 201
KY+P S +EL Q + +++ ++ L D+ + + +G G GKT++ R A
Sbjct: 11 KYRPTSFDELVGQ----DPIKSTLKQAL--ISDRIAP-AYIFSGPRGTGKTSSARIFAKS 63
Query: 202 LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE------NFVERIRRYGSTSPSIP 255
L E T TP E CK G+ + LD E VE IR S P
Sbjct: 64 LNCLKSEKATTTPCGQCEL---CK-GISSGNALDVIEIDAASNTGVENIRELIERSRFAP 119
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCL------LLLVRSTHIPTAV---VLTECGKA 306
+++ + +ID+ + AF L + L ++ + +T P V +L+ C +
Sbjct: 120 AKARWK-VYVIDECHML-STAAFNALLKTLEEPPRQVVFILATTDPQRVLPTILSRCMRF 177
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D R++AL+ ++ L KI ++E+ ++ E I L+A+
Sbjct: 178 D--------------------FRRIALH-----DLESHLIKIAKKEEIQINEEAISLIAK 212
Query: 367 ASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEK 405
S G +R A + L SL P+ L++ PEE+
Sbjct: 213 HSQGGLRDAESLLDQVSLLPPPITQLNIINLIGAIPEEE 251
>gi|15920690|ref|NP_376359.1| replication factor C small subunit [Sulfolobus tokodaii str. 7]
gi|42559516|sp|Q975D3.1|RFCS_SULTO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|342306208|dbj|BAK54297.1| replication factor C small subunit [Sulfolobus tokodaii str. 7]
Length = 327
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 43/247 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+PRSL+++ Q+ VE ++ + KDK + L+ +G G GKT
Sbjct: 8 LWAEKYRPRSLDDIVNQKDIVERLKRFV-------KDKNMPH-LLFSGPPGTGKTTAALA 59
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ L Y ++Y E +D N V+ R ++ G
Sbjct: 60 LVHDLYGDNY----------RQYFLELNASDE--RGIDVIRNKVKEFAR------TVAGG 101
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ ++L+D+ A + LR+ + L +T A C + QS
Sbjct: 102 NVPFKVVLLDEADNMTA-DAQQALRRTMELYTETTRFILA-----CNYLSKIIEPIQSRT 155
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
L P+ + L+ I + E+ + ++ + + GD+R+AI
Sbjct: 156 AL-----------FRFYPLKKEDVVARLAYIAKNEKVEYDQKALETIYDITQGDMRKAIN 204
Query: 378 SLQFSSL 384
LQ SS+
Sbjct: 205 ILQASSV 211
>gi|448512259|ref|XP_003866703.1| Rfc1 protein [Candida orthopsilosis Co 90-125]
gi|380351041|emb|CCG21264.1| Rfc1 protein [Candida orthopsilosis Co 90-125]
Length = 854
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 97/258 (37%), Gaps = 33/258 (12%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--------GDSKDKFSTNVLVITGQAG 188
+LW +K+ P+ +L + +V+++R W E G ++ S +I+G G
Sbjct: 303 RLWTDKHAPKDFNQLCGNKGQVQKLRNWLEHWFENKARNFSGGPENPGSYRAALISGPPG 362
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
+GKT +A+ LG + E + N K+ L TS + F++ R +
Sbjct: 363 IGKTTAAHMVANSLGFDVLEKNASDVRSKSLLNANIKSVLSNTSVIGFFKH---RDDEHQ 419
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
S S S + LI D V + L R T++P ++ C
Sbjct: 420 S--------SNSKKLCLIMD-EVDGMSSGDHGGAGALSQFCRITNMPMILI---CN---- 463
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
D + + D R+ T +K L I +E L I + QA+
Sbjct: 464 -DKSLPKMRTFDRVTYDLPFRRP-----TENEVKSRLMTIALREGIKLDPNIIGQLVQAT 517
Query: 369 GGDIRQAITSLQFSSLKQ 386
DIRQ I L S Q
Sbjct: 518 SNDIRQMINLLSTVSKTQ 535
>gi|254583820|ref|XP_002497478.1| ZYRO0F06446p [Zygosaccharomyces rouxii]
gi|238940371|emb|CAR28545.1| ZYRO0F06446p [Zygosaccharomyces rouxii]
Length = 841
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 39/254 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN---------VLVITGQA 187
+LW KY P +L+++ + V ++++W K+ F + ++ G
Sbjct: 275 KLWTVKYAPTNLQQICGNKGAVTKLKSWLTNWDESKKNGFKKSGRDGSGVFRAAMLYGPP 334
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A+ LG + E + K L+ S + FEN ++
Sbjct: 335 GIGKTTAAHLVANELGYDVLEKNASDVRSKSLLNVGVKNALDNMSVMGFFEN------KH 388
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ ++ ++++D++ +G R +L Q R T P ++ E
Sbjct: 389 NAQD-----DNSKKFVIVMDEVDGMSGGDRGGVGQLAQ----FCRKTLTPMILICNE--- 436
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+D R+ N SIK L I +E++ L +D +
Sbjct: 437 -----RNIPKMRPFDRTCLDIQFRRPDAN-----SIKARLMTIAVRERFKLDPNIVDKLV 486
Query: 366 QASGGDIRQAITSL 379
QA+ GDIRQ I L
Sbjct: 487 QATRGDIRQIINLL 500
>gi|403223788|dbj|BAM41918.1| replication factor C [Theileria orientalis strain Shintoku]
Length = 837
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 95/261 (36%), Gaps = 42/261 (16%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE------ERLGDSKDKFSTNVLVIT 184
S S ++ W KYKP +L + E W L K+ +L+I
Sbjct: 200 VSESRKENWVTKYKPEYFSDLLTRENANLECLRWLSSWKCSSNYLSKYKEP-ENKILLIG 258
Query: 185 GQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERI 244
G +GVGKT V+ + H G + E ++ + + +
Sbjct: 259 GPSGVGKTCLVQVLGRHCGYNIVEINSSDDRTKGRVI-----------------PIINGV 301
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGR--TAFERLRQCLLLLVRSTHIPTAVVLTE 302
GS P P + L++D+ +G+ + L+Q + S P +
Sbjct: 302 VSAGSVDPKRPN------LCLLEDVDTLHGQELSIITHLKQ-----INSKKGPKGNFIKR 350
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
D A++ +EL+ I ++ V + N +K L I +E + E +
Sbjct: 351 PIICTCTDVYARNLKELREI-----SKVVMIESCDNVLLKSRLESIMEEEGVFIPEEYLK 405
Query: 363 LVAQASGGDIRQAITSLQFSS 383
+ + DIR +T L+F S
Sbjct: 406 EIQETYKDDIRSCLTVLEFIS 426
>gi|448408398|ref|ZP_21574193.1| replication factor C small subunit [Halosimplex carlsbadense 2-9-1]
gi|445674253|gb|ELZ26797.1| replication factor C small subunit [Halosimplex carlsbadense 2-9-1]
Length = 327
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 121 LVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV 180
+ D DS S + +++W EKY+P++L+E+ Q VE ++++ D+ +
Sbjct: 1 MSEADTDSGS-RAGREEVWIEKYRPQTLDEIVGQEDIVERLQSYV--------DRNDLSH 51
Query: 181 LVITGQAGVGKTATVRQIASHL 202
+ +G AG+GKT + IA L
Sbjct: 52 FMFSGPAGIGKTTSATAIAREL 73
>gi|408376254|ref|ZP_11173859.1| ATP-dependent protease LA protein [Agrobacterium albertimagni
AOL15]
gi|407749721|gb|EKF61232.1| ATP-dependent protease LA protein [Agrobacterium albertimagni
AOL15]
Length = 279
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE--YMHNCKTGLEYTSKLDEFE 238
L++ G+ G GKT RQ+A+ LG + EW+ + T Q+ Y ++ + L + DE
Sbjct: 29 LLVKGEPGTGKTELARQVAAALGLDILEWNVKSTTKAQQGLYEYDAVSRLRDSQLGDERV 88
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDL 269
N V+ R G + E+K +LLID++
Sbjct: 89 NDVKNYIRKGKLWQAFATETK--CVLLIDEI 117
>gi|126459198|ref|YP_001055476.1| replication factor C small subunit [Pyrobaculum calidifontis JCM
11548]
gi|126248919|gb|ABO08010.1| replication factor C small subunit [Pyrobaculum calidifontis JCM
11548]
Length = 324
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 117/285 (41%), Gaps = 54/285 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
++ W EKY+PRS EE+ +EEV+A RL + + L+ G G GKT
Sbjct: 2 SELFWFEKYRPRSFEEVV----DLEEVKA----RLREFVKAGNLPHLLFYGPPGTGKTTM 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
+A L + +T E + + G+ ER++ + T+P
Sbjct: 54 ALVLARELYGEYWRENT------LELNASDERGIGVIR---------ERVKEFARTAPV- 97
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K+ L+I D A + LR+ + + ++T ++L + +
Sbjct: 98 ---GKAPFKLVILDEADNMTSDAQQALRRIMEIYAQNTRF---ILLA--------NYVSN 143
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +QS +V + NP+ ++ L I E +S + ++ + + + GD+R+
Sbjct: 144 IIEPIQSRVV-----MIRFNPLPKEAVISRLRFIAENEGVKVSDDALEAIYEFTQGDMRK 198
Query: 375 AITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRD 419
AI +LQ ++ S+S+ EE A G S + R+
Sbjct: 199 AINALQVAA-----------SVSREVTEEEVAKALGMVSPRLLRE 232
>gi|297527205|ref|YP_003669229.1| Replication factor C [Staphylothermus hellenicus DSM 12710]
gi|297256121|gb|ADI32330.1| Replication factor C [Staphylothermus hellenicus DSM 12710]
Length = 329
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 53/261 (20%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
S+S + LWAEKY+P++L+E+ Q + V ++ + +ER + L+ G
Sbjct: 2 SSSREVIAELLWAEKYRPKTLDEIVNQEEIVSRLKRFVQER--------NMPHLLFAGPP 53
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G GKT +A L Y ++YM E +D + V+ R
Sbjct: 54 GTGKTTAAHCLAHDLFGENY----------RQYMLELNASDE--RGIDVIRSKVKEFART 101
Query: 248 GSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHI---PTAVVLTE 302
T+ +IP + I+L+D D + + A RL + R I P+ ++
Sbjct: 102 RVTA-NIPFK-----IVLLDEADNMTADAQQALRRLMEMYTATTRFILIANYPSKII--- 152
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
+ + S F P+ + L I QE+ + E ++
Sbjct: 153 ----EPIQSRCAVFR---------------FAPLKKEDVISRLKWIANQEKVEVDEEALE 193
Query: 363 LVAQASGGDIRQAITSLQFSS 383
+ S GD+R+AI LQ ++
Sbjct: 194 AIHDLSEGDMRRAINILQAAA 214
>gi|115383954|ref|XP_001208524.1| hypothetical protein ATEG_01159 [Aspergillus terreus NIH2624]
gi|114196216|gb|EAU37916.1| hypothetical protein ATEG_01159 [Aspergillus terreus NIH2624]
Length = 1053
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 120/287 (41%), Gaps = 50/287 (17%)
Query: 116 SRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW----------- 164
+R +GL + + AS S + +LW KY P S+ + + VE++++W
Sbjct: 451 ARTDGLDSRKGEKAS-SQTDDRLWTTKYAPTSMNMICGNKGIVEKLQSWLRNWHKSAHWN 509
Query: 165 FEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWD----TPTPTIWQEY 220
F++ D + + +++ G G+GKT A+HL A L +D + T ++
Sbjct: 510 FKKAGPDGMGLYRS--VMLHGPPGIGKT-----TAAHLVANLEGYDVVETNASDTRSKKL 562
Query: 221 MHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFER 280
+ G+ T+ L + + + G +K + +L++D++ +G +A +R
Sbjct: 563 VETGLLGVLDTTSLQGY---------FSGEGKKVQG-TKKNLVLIMDEV---DGMSAGDR 609
Query: 281 LR-QCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNG 339
+ + + THIP ++ E + ++ D R+ +
Sbjct: 610 GGVGAMAAVAKKTHIPLIMICNE--------RKLPKMKPFDGVVYDLPFRRPTVE----- 656
Query: 340 SIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQ 386
I+ LS IC +E + +D + + + DIRQ I L L Q
Sbjct: 657 QIRARLSTICFREGMKIPPPVLDSLIEGTHADIRQVINMLSTVKLDQ 703
>gi|346466437|gb|AEO33063.1| hypothetical protein [Amblyomma maculatum]
Length = 377
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P E+ + + + + S++ NV +++G GVGKT T+ +
Sbjct: 61 WVEKYRPAKFSEIVGNEETIARLEIF-------SREGNVPNV-ILSGPPGVGKTTTILCL 112
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPGE 257
A L P+ + LE + D + V +I+ + ++P
Sbjct: 113 ARILLG---------PSFREAV-------LELNASNDRGIDVVRNKIKMFAQKKVTLP-P 155
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K I+L + +T G A + LR+ + + ++T A C +D + E
Sbjct: 156 GKHKIIILDEADSMTEG--AQQALRRTMEIYSKTTRFALA-----CNTSDKI------IE 202
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
+QS V + +T+ I L IC++E S + ++ + + GD+RQAI
Sbjct: 203 PIQS-----RCAVVRFSRLTDAQILAKLLDICKREDASYVEDGLEALVFTAQGDMRQAIN 257
Query: 378 SLQ 380
+LQ
Sbjct: 258 NLQ 260
>gi|302690436|ref|XP_003034897.1| hypothetical protein SCHCODRAFT_51070 [Schizophyllum commune H4-8]
gi|300108593|gb|EFI99994.1| hypothetical protein SCHCODRAFT_51070, partial [Schizophyllum
commune H4-8]
Length = 541
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 95/265 (35%), Gaps = 38/265 (14%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAW--------FEERLG------------DSKDKFS 177
LW ++Y+P EL + +V AW F R G D +
Sbjct: 2 LWVDRYRPTRFTELIGNERSARDVMAWVKQWDWCVFGHRKGKKRPREENQEGMDEYHRPQ 61
Query: 178 TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEF 237
+L+++G G+GKT +A H G + E + E + LE S +
Sbjct: 62 EKLLLMSGPPGLGKTTLAHVVARHAGYEVMEINASDARSGTEVEDRIRPALESGSAVGSK 121
Query: 238 ENFVERIRRY-GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
+ + I G+TS + L D P R +R + ++R
Sbjct: 122 KPVLLVIDEIDGATSADNSSSFIHKLVQLTKDEPSKKRRPGQKRDPKTARPILRP----- 176
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
++ C D A + +L+ A V L + I + L +IC E
Sbjct: 177 --IICICN-----DPNASALAKLRP-----QALHVRLQRPADAHIVKRLRQICELEALRA 224
Query: 357 STEQIDLVAQASGGDIRQAITSLQF 381
++ + + + GD+R + +LQF
Sbjct: 225 DSQALSALVAVARGDMRGCLNTLQF 249
>gi|403222871|dbj|BAM41002.1| uncharacterized protein TOT_030000263 [Theileria orientalis strain
Shintoku]
Length = 1053
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 52/279 (18%)
Query: 117 RFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFE--------ER 168
R +G V + + Q+ EKY+P +L EL +K +E ++ W + +
Sbjct: 524 RLDGKV---EGGVGTTKAQDQMLFEKYRPSNLYELMGNQKLIERLKEWLQNYDYTGEYKH 580
Query: 169 LGDSKDK-FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQ--EYMHNCK 225
LG SK K S +++G G+GKT R + G + E++ E +
Sbjct: 581 LGSSKGKDDSFKAALLSGPPGIGKTTCARLVGESFGYYVMEFNASDQRSKNAVEKITPLV 640
Query: 226 TGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QC 284
TG T L+ F+N IR T +L++D++ +G ++ +R Q
Sbjct: 641 TG---TVTLNSFQN--NSIRDLKRT------------LLVLDEI---DGMSSGDRGGIQS 680
Query: 285 LLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDA--GARKVALNPITNGSIK 342
++ L++ P ++ C D +Q L + +D G+ + L IK
Sbjct: 681 IIKLIQIARCPIILI---CN-----DRYSQKISTLSNKCLDLRFGSPSIEL------FIK 726
Query: 343 RTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQF 381
R +++IC+ E+ + + + S GD+R + LQF
Sbjct: 727 R-VNQICKLEKIPATENLLLDLYHKSNGDMRYTLNYLQF 764
>gi|126466118|ref|YP_001041227.1| replication factor C small subunit [Staphylothermus marinus F1]
gi|158513390|sp|A3DNV9.1|RFCS_STAMF RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|126014941|gb|ABN70319.1| replication factor C small subunit [Staphylothermus marinus F1]
Length = 329
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 63/266 (23%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQA 187
S+S + LWAEKY+P++L+E+ Q + V ++ + +ER + L+ G
Sbjct: 2 SSSREVIAELLWAEKYRPKTLDEIVDQEEIVSRLKQFVKER--------NMPHLLFAGPP 53
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE-----YTSKLDEFENFVE 242
G GKT +A L Y ++YM E SK+ EF
Sbjct: 54 GTGKTTAAHCLAHDLFGENY----------RQYMLELNASDERGIDVIRSKVKEF----A 99
Query: 243 RIRRYGSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHI---PTA 297
R R + +IP + I+L+D D + + A RL + R I P+
Sbjct: 100 RTR----VAANIPFK-----IVLLDEADNMTADAQQALRRLMEMYTATTRFILIANYPSK 150
Query: 298 VVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLS 357
++ + + S F P+ + L I QE+ +
Sbjct: 151 II-------EPIQSRCAVFR---------------FAPLKKEDVISRLKWIAEQEKVEID 188
Query: 358 TEQIDLVAQASGGDIRQAITSLQFSS 383
E ++ + S GD+R+AI LQ ++
Sbjct: 189 EEALEAIHDLSEGDMRRAINILQAAA 214
>gi|383774866|ref|YP_005453935.1| DNA polymerase III subunits gamma and tau [Bradyrhizobium sp.
S23321]
gi|381362993|dbj|BAL79823.1| DNA polymerase III subunits gamma and tau [Bradyrhizobium sp.
S23321]
Length = 605
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 123 NPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVL 181
NPD SAS + + ++ A KY+P S ++L Q V V FE R+
Sbjct: 9 NPD--SASQAGTPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRI--------PQAW 58
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH-NCKTGLEYTSKLDEFE-- 238
++TG GVGKT T R +A L + + PTI + +C+ +E + +D E
Sbjct: 59 ILTGVRGVGKTTTARILARALNYEMPDGSVKGPTIHMPTLGVHCQAIME-SRHMDVLEMD 117
Query: 239 ----NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI 294
V+ +R+ + P ++ + +ID++ + + AF + L H
Sbjct: 118 AASHTGVDDVRQINDSVRYAPASARYK-VYIIDEVHMLST-AAFNAFLKT--LEEPPEHA 173
Query: 295 PTAVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ 353
TE K +V S Q F+ L + + + L+ I +E
Sbjct: 174 KFVFATTEIRKVPVTVLSRCQRFD---------------LRRVEADVLMKHLANISAKEN 218
Query: 354 YSLSTEQIDLVAQASGGDIRQAITSL 379
+ E + ++A+A+ G +R +++ L
Sbjct: 219 VEIEPEALGIIARAAEGSVRDSLSLL 244
>gi|241325995|ref|XP_002408228.1| hypothetical protein IscW_ISCW005189 [Ixodes scapularis]
gi|215497278|gb|EEC06772.1| hypothetical protein IscW_ISCW005189 [Ixodes scapularis]
Length = 894
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 125 DHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---EERLG----------- 170
D +A ++ Q W +KY+P + E+R+W +ER
Sbjct: 70 DDSNAFCKAAESQAWPDKYRPSKSCRFVGNNAAIAELRSWLATWKERHAQWTLSKKPRQS 129
Query: 171 --DSKD--KFSTNVLVITGQAGVGKTATVRQIASHLGARLYE 208
DS+D + +N L++TG GVGKT+ V +A LG ++ E
Sbjct: 130 QSDSEDSTEAPSNCLLLTGPPGVGKTSAVYYLAEELGYKVLE 171
>gi|238882346|gb|EEQ45984.1| activator 1 95 kDa subunit [Candida albicans WO-1]
Length = 890
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--------GDSKDKFSTNVLVITGQAG 188
+LW +++ P L +L + +++++++W E G++ D S ++I+G G
Sbjct: 337 KLWTDRHAPTDLNQLCGNKGQIQKLKSWLENWFDNQARGFKGNASDPDSFRAVLISGPPG 396
Query: 189 VGKTATVRQIASHLGARLYE 208
+GKT+ +A LG + E
Sbjct: 397 IGKTSAAHLVAKSLGFDIIE 416
>gi|70606693|ref|YP_255563.1| replication factor C small subunit [Sulfolobus acidocaldarius DSM
639]
gi|449066916|ref|YP_007433998.1| replication factor C small subunit [Sulfolobus acidocaldarius N8]
gi|449069188|ref|YP_007436269.1| replication factor C small subunit [Sulfolobus acidocaldarius
Ron12/I]
gi|73914011|sp|Q4JAB0.1|RFCS_SULAC RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit
gi|68567341|gb|AAY80270.1| replication factor C [Sulfolobus acidocaldarius DSM 639]
gi|449035424|gb|AGE70850.1| replication factor C small subunit [Sulfolobus acidocaldarius N8]
gi|449037696|gb|AGE73121.1| replication factor C small subunit [Sulfolobus acidocaldarius
Ron12/I]
Length = 325
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 45/247 (18%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+P+SL+E+ Q++ VE ++ + +E+ + L+ G G GKT
Sbjct: 6 LWAEKYRPKSLDEIVNQKEIVERLKKFVKEK--------NMPHLLFAGPPGTGKTTAALA 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYT-SKLDEFENFVERIRRYGSTSPSIPG 256
+ L Y + E + + G++ +K+ EF V S ++P
Sbjct: 58 LVRDLYGNNYR------QYFLELNASDERGIDVIRNKVKEFARTV--------ASNNVPF 103
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ ++L+D+ A + LR+ + L +T A C + QS
Sbjct: 104 K-----VILLDEADNMTA-DAQQALRRTMELYTETTRFILA-----CNYLSKIIEPIQSR 152
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L P+ + L +I + E+ + I+ + + GD+R+AI
Sbjct: 153 TAL-----------FRFYPLKKEDVVNRLIQIAKNEKVEFDPKGIETIFDITQGDMRKAI 201
Query: 377 TSLQFSS 383
+Q +S
Sbjct: 202 NVIQAAS 208
>gi|390463438|ref|XP_002748386.2| PREDICTED: ATPase family AAA domain-containing protein 5 [Callithrix
jacchus]
Length = 2147
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 32/115 (27%)
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAW---------FEER--LGDSKD 174
DS+ S + LW EKY+P++ EL ++++ +W EER L +D
Sbjct: 1351 RDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRD 1410
Query: 175 KFSTNVL---------------------VITGQAGVGKTATVRQIASHLGARLYE 208
+ +VL +I+G GVGKTA V A LG +++E
Sbjct: 1411 EKQEDVLGSIDFKGSSDDEEESRLCSTVLISGPTGVGKTAAVYACAQELGFKIFE 1465
>gi|260951239|ref|XP_002619916.1| hypothetical protein CLUG_01075 [Clavispora lusitaniae ATCC 42720]
gi|238847488|gb|EEQ36952.1| hypothetical protein CLUG_01075 [Clavispora lusitaniae ATCC 42720]
Length = 876
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 52/274 (18%)
Query: 124 PDHDSASASS------STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS 177
P +S+ A+S ++++LW KY P S +L + ++++++ W ++K F
Sbjct: 275 PKQESSRAASPPREIPNSEKLWTVKYAPTSTAQLCGNKGQIQKLKNWLANWFDNAKTNFK 334
Query: 178 TN---------VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGL 228
+I+G G+GKT+ +A LG + E + N K+ L
Sbjct: 335 NKGADGSGIFRAALISGPPGIGKTSAAHLVAQELGFDILEKNASDVRSKSLLNSNIKSVL 394
Query: 229 EYTSKLDEFENFVER-----IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ 283
TS + F++ E+ RR+ L++D++ +G ++ +
Sbjct: 395 NNTSVVGFFKHQGEKEHQTNERRF---------------CLIMDEV---DGMSSGDHGSA 436
Query: 284 -CLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIK 342
L R T++P ++ C D + + +D R+ + +K
Sbjct: 437 GALSAFCRITNMPMILI---CN-----DKSLPKMRTFDRVTLDLPFRRP-----SEMEMK 483
Query: 343 RTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
L I +E+ L I + QA+G DIRQ I
Sbjct: 484 SRLLTIAFREKLKLDPTVIGQLVQATGNDIRQII 517
>gi|387594368|gb|EIJ89392.1| hypothetical protein NEQG_00162 [Nematocida parisii ERTm3]
gi|387596789|gb|EIJ94410.1| hypothetical protein NEPG_01078 [Nematocida parisii ERTm1]
Length = 513
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 43/251 (17%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+++ W +KYKP + ++ ++ + +++ S +++TG +G GKT +
Sbjct: 100 SKERWCDKYKPETSSDILGNKQTITQLKTHLLS--------MSRAPILLTGSSGCGKTLS 151
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSI 254
IA LG L E++ G +Y +K + + ++ + S + I
Sbjct: 152 AYLIAKELGISLIEYN----------------GADYRNKQEV--SIIKGLSTQKSLTHGI 193
Query: 255 PGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K+ A+L+ + + N ++ Q +L L + T IP ++LT K
Sbjct: 194 HLH-KNKALLMEE---IENMTSSDRGGLQEILNLFKETKIP--IILTTNNKGS------- 240
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
+ L++I+ + + + + I + SI L I +E S+ + ++ +GGD+R
Sbjct: 241 --QNLKTII--SKCKVIPYSKIDSRSITNLLKTITIKEGISVPENTLMQISVTAGGDVRY 296
Query: 375 AITSLQFSSLK 385
AI LQ+ S K
Sbjct: 297 AINMLQYLSKK 307
>gi|448445134|ref|ZP_21590189.1| replication factor C small subunit [Halorubrum saccharovorum DSM
1137]
gi|445685440|gb|ELZ37794.1| replication factor C small subunit [Halorubrum saccharovorum DSM
1137]
Length = 328
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
+A+++ +++W EKY+P+SL+++ Q + VE ++++ E +D L+ +G AGV
Sbjct: 9 AATATGREIWIEKYRPQSLDDIHGQEEIVERLQSYIE------QDDIPH--LLFSGPAGV 60
Query: 190 GKTATVRQIASHL 202
GKT IA +
Sbjct: 61 GKTTAATAIARQV 73
>gi|145343745|ref|XP_001416472.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576697|gb|ABO94765.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 498
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 104/257 (40%), Gaps = 38/257 (14%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGD----SKDKFST-NVLVITGQAG 188
++ LW +K+ PR L +L + +R W G+ K ST ++I+G G
Sbjct: 9 NSANLWTDKFSPRVLADLVGNSSAIATLRTWLSNWPGNQATGKASKVSTRKAILISGAPG 68
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--FENFVERIRR 246
+GKT + I LG +Q N T + + +R
Sbjct: 69 IGKTTSAILICRELG-------------FQTMNVNASDSRGKTGAVSDGIAGTLASTVRE 115
Query: 247 YGST-SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTECG 304
+ + + I G + L++D++ +G +R L+ +++ T IP ++ C
Sbjct: 116 FVTNRNIGIDGLRSTKTALIMDEV---DGMAGGDRGGISELIEVIKHTRIP---IICICN 169
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
D +Q + L + VD + +++ L++I ++ + ++ +D +
Sbjct: 170 -----DRYSQKLKTLANYCVD-----LPFQRPNKLQLRKYLNQIVASQRLDVDSDAVDAL 219
Query: 365 AQASGGDIRQAITSLQF 381
+A+ D+R +I LQ
Sbjct: 220 IEANNNDLRSSINQLQL 236
>gi|393215252|gb|EJD00743.1| DNA replication factor C, large subunit [Fomitiporia mediterranea
MF3/22]
Length = 967
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 36/255 (14%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE------RLGDSKDKFSTNV---LVITGQA 187
QLW +Y P+ L+E+ + +VE+++ W ++ K N+ ++ITG
Sbjct: 398 QLWTVRYAPKMLKEICGNKGQVEKLQLWLQDWSSSLKSSFKKPGKNGMNIFRAVLITGPP 457
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKL--DEFENFVERIR 245
G+GKT + +HL A+L + TP K +E ++ + + ++ R
Sbjct: 458 GIGKTTS-----AHLCAKLAGF---TPIELNASDARSKKLVENSTNIANTSLDGWMSGKR 509
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
T + E + L++D++ +G +A +R L L++ T IP +
Sbjct: 510 TTPKTVNATGIEISDKSCLIMDEV---DGMSAGDRGGVGALNSLIKKTKIPIICIAN--- 563
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
D AQ + L + + RK +++ + I +E+ + +D +
Sbjct: 564 -----DRNAQKLKPLLNTTFNLSFRKP-----DAAAVRSRIMTIAFKEKMKIPANVVDQL 613
Query: 365 AQASGGDIRQAITSL 379
Q + DIRQ + L
Sbjct: 614 VQGAQSDIRQVLNML 628
>gi|119873156|ref|YP_931163.1| replication factor C small subunit [Pyrobaculum islandicum DSM
4184]
gi|150415671|sp|A1RV38.1|RFCS2_PYRIL RecName: Full=Replication factor C small subunit 2; Short=RFC small
subunit 2; AltName: Full=Clamp loader small subunit 2
gi|119674564|gb|ABL88820.1| replication factor C small subunit [Pyrobaculum islandicum DSM
4184]
Length = 320
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 45/250 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
++ W EKY+PRS +E+ +EEV++ RL + + L+ G G GKT
Sbjct: 2 SELFWFEKYRPRSFDEVV----DLEEVKS----RLREFVKSGNMPHLLFYGPPGTGKTTM 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPS 253
+A L + +T LE + + N + ER++ + T+P
Sbjct: 54 ALVLARELYGEYWRENT----------------LELNASDERGINVIRERVKEFARTAPV 97
Query: 254 IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
K+ L+I D A + LR+ + + ++T ++L + +
Sbjct: 98 ----GKAPFKLVILDEADNMTSDAQQALRRIMEIYAQNTRF---ILLA--------NYIS 142
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
E +QS +V + NP+ ++ L I E +S + ++ + + + GD+R
Sbjct: 143 GIIEPIQSRVV-----MIRFNPLPKEAVISRLRYIAENEGVKISDDALETIYEFTQGDMR 197
Query: 374 QAITSLQFSS 383
+AI +LQ ++
Sbjct: 198 KAINALQIAA 207
>gi|380013855|ref|XP_003690961.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 2-like
[Apis florea]
Length = 351
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ ++ V + + ++ G+ + ++I G GVGKT T+ +
Sbjct: 39 WIEKYRPQIFSDIVGNEDTVSRLSVFAQQ--GNCPN------IIIAGPPGVGKTTTILCL 90
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIPGE 257
A L +++ + LE + D + V +I+ + ++P +
Sbjct: 91 ARILLGPIFK----------------EAVLELNASNDRGIDVVRNKIKMFAQKRVNLP-K 133
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K I+L + +T+G A + LR+ + + +T A C +D + QS
Sbjct: 134 GKHKIIILDEADSMTSG--AQQALRRTMEIYSNTTRFALA-----CNSSDKIIEPIQS-- 184
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
+ ++ G +++ I + IC++E S + + ++ + + GD+RQA+
Sbjct: 185 --RCAMLRYGK-------LSDAQILAKIIDICKKEDVSHTDDGLEAIVFTAQGDMRQALN 235
Query: 378 SLQ 380
+LQ
Sbjct: 236 NLQ 238
>gi|452988005|gb|EME87760.1| hypothetical protein MYCFIDRAFT_114532, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1082
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 117/292 (40%), Gaps = 48/292 (16%)
Query: 121 LVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFS--- 177
L + D +S +LW +Y P+SL ++ + VE+++ W + K F
Sbjct: 481 LKSADKGKSSVEGPDTRLWTVRYAPQSLGQICGNKGAVEKLQRWLRNFPKNQKTGFKLMG 540
Query: 178 ------TNVLVITGQAGVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTG 227
++I G G+GKT A+HL A+L +D + T ++ + G
Sbjct: 541 PDGSGLHRAVMIHGPPGIGKT-----TAAHLVAKLEGYDIVESNASDTRSKKLVEQGLKG 595
Query: 228 LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLL 287
+ T+ L + +G + + SK +L++D++ +G +A +R L
Sbjct: 596 VLSTTSLMGY---------FGRGADDVDA-SKKKLVLIMDEV---DGMSAGDRGGVGALA 642
Query: 288 LV-RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLS 346
V + T IP ++ D + + D R+ P T+ I+ +
Sbjct: 643 AVCKKTMIPMILICN--------DRKLPKMKPFDFVTYDLPFRR----PTTD-MIRSRIM 689
Query: 347 KICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISK 398
I +E + I+ + + SG DIRQ + + + L NLS SK
Sbjct: 690 TIAYREGLKMPPPVINALIEGSGADIRQVVNMISTAKLDSQ---NLSYEESK 738
>gi|388582052|gb|EIM22358.1| DNA replication factor C, large subunit [Wallemia sebi CBS 633.66]
Length = 753
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 42/263 (15%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-----RLGDSKDKFSTNV---- 180
S+ S QLW KY P L+++ + +VE++ W ++ R G D +++
Sbjct: 164 SSISPNSQLWTVKYSPNQLKDICGNKGQVEKIVNWLKDWQNHLRNGFPSDNSKSDIKGKK 223
Query: 181 -LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDE--F 237
L++ G G+GKT A+HL A+ + +P K +E T+ +D
Sbjct: 224 ALLVHGAPGIGKTT-----AAHLAAKSAGY---SPLELNASDVRSKKLIESTTNIDNTSI 275
Query: 238 ENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPT 296
+ F +G+ + + + + LI D +G +A +R + L++ T IP
Sbjct: 276 DTF------FGNNNNDAINTNVTHSTCLIFD--ECDGMSAGDRGGIGAMNALIKKTRIPI 327
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
+ D + Q+ D R+ + I+ + I +E+ L
Sbjct: 328 ICICN--------DKSNPKMRPFQNTCGDILFRRPEAS-----QIRSRIMSILHKEKMKL 374
Query: 357 STEQIDLVAQASGGDIRQAITSL 379
+ +D + S DIRQ I +
Sbjct: 375 DSNVVDQLISGSQSDIRQVINMI 397
>gi|393234881|gb|EJD42440.1| DNA replication factor C, large subunit [Auricularia delicata
TFB-10046 SS5]
Length = 814
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 35/265 (13%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------STNV---LVITG 185
++QLW KY P L+E+ + VE++R W K F NV ++I+G
Sbjct: 278 SEQLWTTKYAPTKLQEICGNKATVEKLRLWLSAWQASMKSGFKKPGKDGMNVFRAVLISG 337
Query: 186 QAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIR 245
GVGKT T +HL A++ + TP K +E + +D
Sbjct: 338 PPGVGKTTT-----AHLVAKMEGY---TPLELNASDARSKKLIENGANIDNRSLDGWMAG 389
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLLLLVRSTHIPTAVVLTECG 304
G T+ ++ L++D++ +G +A +R L L++ T +P +
Sbjct: 390 EEGKTN-AVGVAITERTCLIMDEV---DGMSAGDRGGVGALNALIKRTKVPIICIAN--- 442
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
D +Q + L++ + K + I+ + I +E + ID +
Sbjct: 443 -----DGRSQKLQPLKATTYNMTFSKPQVQ-----QIRSRIMTIVMREGMKVPPNVIDQL 492
Query: 365 AQASGGDIRQAITSLQFSSLKQDPM 389
+ DIRQ + L L D M
Sbjct: 493 ISGAQSDIRQVLNMLSTWKLSNDTM 517
>gi|448091665|ref|XP_004197386.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
gi|448096237|ref|XP_004198417.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
gi|359378808|emb|CCE85067.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
gi|359379839|emb|CCE84036.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITG 185
+++LW KY P+ + +L + +V +++ W E ++K F +I+G
Sbjct: 255 SEKLWTVKYAPKDMNQLCGNKGQVNKLKLWLERWFDNAKHNFKNPGSDGSGIYRACLISG 314
Query: 186 QAGVGKTATVRQIASHLGARLYE 208
G+GKT+ +A LG + E
Sbjct: 315 PPGIGKTSAAHLVARSLGLDVLE 337
>gi|194217312|ref|XP_001918366.1| PREDICTED: LOW QUALITY PROTEIN: ATPase family AAA domain-containing
protein 5 [Equus caballus]
Length = 1857
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER--------- 168
DS+ + LW EKY+P++ EL ++++ +W EER
Sbjct: 1051 DSSKDLGTEDMLWTEKYQPQNSGELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKKDE 1110
Query: 169 ----LGDSKD-KFST---------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
L DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1111 KQEDLSDSIDFKGSSDDEEESCLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1164
>gi|159477641|ref|XP_001696917.1| DNA replication factor C complex subunit 1 [Chlamydomonas
reinhardtii]
gi|158274829|gb|EDP00609.1| DNA replication factor C complex subunit 1 [Chlamydomonas
reinhardtii]
Length = 1182
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 112/282 (39%), Gaps = 47/282 (16%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF--------------EERLGDSK 173
+A+ + QLW +KYKPR+ EL V+ +++W + G SK
Sbjct: 531 AAAGDAGQYQLWVDKYKPRNSAELVGNNTLVDNLKSWLMNWEQVHLRGGAAPTAKGGGSK 590
Query: 174 DK-FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTP--------TPTIWQEYMHNC 224
K S +++G G+GKT+ +A G + E + T N
Sbjct: 591 PKDLSKKAALLSGPPGIGKTSAAHIMAREAGFEVVEMNASDTRNKAGKTSEGIAGKQSNI 650
Query: 225 KTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-Q 283
+ ++ L GST+P +L++D++ +G + +R Q
Sbjct: 651 IKEMVTSTTLPPGLFGGGCGGGLGSTAP-------RRQLLIMDEV---DGMSGGDRGGVQ 700
Query: 284 CLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKR 343
L+ ++ + IP + D Q + L++ ++ RK + I +
Sbjct: 701 DLIDTIKRSKIPIICICN--------DKYNQKLKSLRNHCLELEFRKPTVL-----QISK 747
Query: 344 TLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLK 385
+S+I +E +++ +D + +GGD+R + LQ L+
Sbjct: 748 RMSEIAAKEGLAINQATMDALVTGAGGDLRLILGQLQMVRLR 789
>gi|426237162|ref|XP_004012530.1| PREDICTED: ATPase family AAA domain-containing protein 5 [Ovis aries]
Length = 1847
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF-------------------EE 167
DS+ S LW EKY+P++ EL ++++ +W +E
Sbjct: 1043 DSSKDSGIEDMLWTEKYQPQNSSELIGNELAIKKLHSWLKDWKRRAELEEGQNLKGKRDE 1102
Query: 168 RLGDSKD----KFST---------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
+ DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1103 KQEDSLDSRDFKGSSDDEEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1156
>gi|190407527|gb|EDV10794.1| replication factor C subunit 1 [Saccharomyces cerevisiae RM11-1a]
Length = 861
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 39/254 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P +L+++ + V +++ W K+ F ++ G
Sbjct: 296 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPP 355
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A LG + E + K L+ S + F++ E
Sbjct: 356 GIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLN 415
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
G ++++D++ +G R +L Q R T P ++ E
Sbjct: 416 G-----------KHFVIIMDEVDGMSGGDRGGVGQLAQ----FCRKTSTPLILICNE--- 457
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ +D R+ N SIK L I +E++ L ID +
Sbjct: 458 -----RNLPKMRPFDRVCLDIQFRRPDAN-----SIKSRLMTIAIREKFKLDPNVIDRLI 507
Query: 366 QASGGDIRQAITSL 379
Q + GDIRQ I L
Sbjct: 508 QTTRGDIRQVINLL 521
>gi|448123321|ref|XP_004204663.1| Piso0_000523 [Millerozyma farinosa CBS 7064]
gi|448125599|ref|XP_004205221.1| Piso0_000523 [Millerozyma farinosa CBS 7064]
gi|358249854|emb|CCE72920.1| Piso0_000523 [Millerozyma farinosa CBS 7064]
gi|358350202|emb|CCE73481.1| Piso0_000523 [Millerozyma farinosa CBS 7064]
Length = 327
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 52/256 (20%)
Query: 132 SSSTQQL---WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNV--LVITGQ 186
SS +Q L W EKY+P+ L+++ + VE ++ N+ ++++G
Sbjct: 3 SSYSQHLELPWVEKYRPKKLDDIVGNEETVERLKLI----------ALDGNMPHMILSGL 52
Query: 187 AGVGKTATVRQIASH-LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RI 244
G+GKT ++ +A LG LY T +E + D + V +I
Sbjct: 53 PGIGKTTSIHCLAYELLGPELYHQAT----------------MELNASDDRGIDVVRNKI 96
Query: 245 RRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECG 304
+++ T +P + I+L + +T G A + LR+ + + +T A C
Sbjct: 97 KQFAQTKIQLPA-GRHKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CN 148
Query: 305 KADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLV 364
++ + E LQS + N +++ + + L +I + E ++E + +
Sbjct: 149 QSSKI------IEPLQS-----RCAILRYNKLSDEQVLQRLLEITKLEDVKYNSEGLQAL 197
Query: 365 AQASGGDIRQAITSLQ 380
+ GD+RQAI +LQ
Sbjct: 198 IFTAEGDMRQAINNLQ 213
>gi|395791453|ref|ZP_10470911.1| DNA polymerase III, subunit gamma and tau [Bartonella alsatica IBS
382]
gi|395408816|gb|EJF75426.1| DNA polymerase III, subunit gamma and tau [Bartonella alsatica IBS
382]
Length = 640
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 49/258 (18%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKT 192
+T ++ A KY+P++ +L Q V + FE R+ + ++TG GVGKT
Sbjct: 8 TTYRVLARKYRPQNFSDLIGQEAMVRTLTNAFETGRIAQA--------WMLTGIRGVGKT 59
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE------------YTSKLDEFENF 240
T R +A L + + D PT T+ +C +E + +D+
Sbjct: 60 TTARILARALNYKTKDIDQPT-TVLNTLGEHCTQIIEGRHIDVIEMDAASHTGIDDIREI 118
Query: 241 VERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
+E+I RY S + +ID++ + + + AF L + L H+
Sbjct: 119 IEQI-RYRPVSARY-------KVYIIDEVHMLSTQ-AFNGLLKT--LEEPPAHVKFIFAT 167
Query: 301 TECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTE 359
TE K ++ S Q F+ L I + + LS+I + E+ + +
Sbjct: 168 TEIRKVPITILSRCQRFD---------------LRRIESKVLNTHLSQIAKYEKVEVEDK 212
Query: 360 QIDLVAQASGGDIRQAIT 377
+ ++A+A+ G +R A++
Sbjct: 213 ALSMIARAAEGSVRDALS 230
>gi|241957984|ref|XP_002421711.1| chromosome transmission fidelity protein, putative [Candida
dubliniensis CD36]
gi|223645056|emb|CAX39650.1| chromosome transmission fidelity protein, putative [Candida
dubliniensis CD36]
Length = 851
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 120/313 (38%), Gaps = 44/313 (14%)
Query: 121 LVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQ------RKKVEEVRAWFEERLGD--- 171
L P S +++ Q+W EKYKP + +L R ++ ++ W GD
Sbjct: 166 LSKPPSSSIDGGTTSSQIWTEKYKPNNFIQLCSAGNDRQYRSILQWLKKWSPVVFGDDIP 225
Query: 172 ---SKDKFS---TNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTP--TIWQEYMHN 223
+ D +L+I G G+GKT +A H+G + E + T+ Q
Sbjct: 226 HKENADPLGRPYKKILLIHGPTGIGKTTISHILAKHMGYTVQELNAANSMDTLPQASGGG 285
Query: 224 CKTGLEYTSKLD-EFENFV--ERIRRYGSTSPSIPGESKSSA-----ILLIDDLPVTNGR 275
S L + N + I G + I E S A + +++DL ++ R
Sbjct: 286 SSAYTNAASALKLKIVNALTSNSIHSQGKPTCLIIDEIDSLANINDVVKVLNDLVQSDHR 345
Query: 276 TAFERLRQCLLLLVRST----------HIPTAVVLTECGKADSVDSTAQSFEELQSILVD 325
++L++ + + + + P + + S E+L+ I
Sbjct: 346 ALNKKLKRSSMEDIEAKKKSKKKDIFLNRPIICIANDIYSQPSNRFGPNPMEKLRPISEI 405
Query: 326 AGARKVALNPITNGS---------IKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
RK + T+G+ +K L +I +QE L ++I + + GDIR I
Sbjct: 406 IQFRKPTSSRTTSGAKTGGNAIKSVKDYLMEINKQENMGLDHQEIGEIVEICEGDIRACI 465
Query: 377 TSLQFSSLKQDPM 389
+QF+S D +
Sbjct: 466 NHMQFNSRSVDTI 478
>gi|443927152|gb|ELU45674.1| purine nucleotide binding protein [Rhizoctonia solani AG-1 IA]
Length = 1048
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 126 HDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF--------- 176
+ S++ + T QLW KY P+SL+++ + V++++ W E +K F
Sbjct: 445 YPSSAPAPPTAQLWTTKYAPQSLKDVCGNKALVDKLQLWLHEWQASAKAGFKKPGKNGMN 504
Query: 177 STNVLVITGQAGVGKTATVRQIASHLG 203
++ +++ G G+GKT + +A G
Sbjct: 505 TSRAVLLAGPPGIGKTTSAHLVAKAEG 531
>gi|27383227|ref|NP_774756.1| DNA polymerase III subunits gamma and tau [Bradyrhizobium japonicum
USDA 110]
gi|27356401|dbj|BAC53381.1| DNA polymerase III tau subunit [Bradyrhizobium japonicum USDA 110]
Length = 613
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 124 PDHDSAS-ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVL 181
P+ DSAS A ++ ++ A KY+P S ++L Q V V FE R+
Sbjct: 8 PNSDSASQAGNAPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRI--------PQAW 59
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMH-NCKTGLEYTSKLDEFE-- 238
++TG GVGKT T R +A L + + PTI + +C+ +E + +D E
Sbjct: 60 ILTGVRGVGKTTTARILARALNYEMPDGSVKGPTIHMPNLGVHCQAIME-SRHMDVLEMD 118
Query: 239 ----NFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHI 294
V+ +R+ + P ++ + +ID++ + + AF + L H
Sbjct: 119 AASHTGVDDVRQINDSVRYAPASARYK-VYIIDEVHMLST-AAFNAFLKT--LEEPPEHA 174
Query: 295 PTAVVLTECGKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQ 353
TE K +V S Q F+ L + + + L+ I +E
Sbjct: 175 KFVFATTEIRKVPVTVLSRCQRFD---------------LRRVEADVLMKHLASIAAKES 219
Query: 354 YSLSTEQIDLVAQASGGDIRQAITSL 379
+ E + ++A+A+ G +R +++ L
Sbjct: 220 VEIEPEALGIIARAAEGSVRDSLSLL 245
>gi|71018701|ref|XP_759581.1| hypothetical protein UM03434.1 [Ustilago maydis 521]
gi|46099339|gb|EAK84572.1| hypothetical protein UM03434.1 [Ustilago maydis 521]
Length = 950
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 151/377 (40%), Gaps = 72/377 (19%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKF------S 177
P +A+ + + LW KY P +++L + VE++ +W + + F
Sbjct: 370 PKDGNANPADLSNMLWTTKYAPTQMKDLVGNKAAVEKLASWLKAWPDSYRSNFKKPGPTG 429
Query: 178 TNV---LVITGQAGVGKTATVRQIASHLGARLYEWDTP-------TPTIWQEYMHNCKTG 227
NV ++I+G G+GKT + +A G E++ + Q+ ++N
Sbjct: 430 MNVYRAVLISGPPGIGKTTSAHLVAKMEGYSPLEFNASDARSKKLVEGMLQDTINN---- 485
Query: 228 LEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLR-QCLL 286
LD + + V + + + P I +L++D++ +G + +R +
Sbjct: 486 ----KSLDSWYSSVAKPSSWSAGLPRI----HDRTVLIMDEV---DGMSGGDRGGVGAIN 534
Query: 287 LLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLS 346
L++ T +P ++ C D Q + + RK P N R LS
Sbjct: 535 ALIKKTKVP---IICICN-----DRRNQKMRPFEHTTFNLTFRK----PDANQVKSRMLS 582
Query: 347 KICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKA 406
I +E+ + E + + +A+ DIR I L L D M +F E KA
Sbjct: 583 -IAFKEKLKIPGEVMAQLIEAAQSDIRSVINMLSTWKLSNDSM----------DFDESKA 631
Query: 407 DGHGGFSIQFGRDETLSLF---HALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMD 463
G + + G SL+ A G F N ++T N D+ +D S +PL
Sbjct: 632 --LGAENAKPGLHTPFSLYGELSAPGMFNANSKKTLN----DKADLYFQD-HSFVPL--- 681
Query: 464 APEKVLSQAHGQARPVL 480
++++ + +ARPVL
Sbjct: 682 ----MVAENYVKARPVL 694
>gi|331703064|ref|YP_004399751.1| DNA polymerase III subunits gamma/tau [Mycoplasma mycoides subsp.
capri LC str. 95010]
gi|328801619|emb|CBW53772.1| DNA polymerase III gamma tau subunits [Mycoplasma mycoides subsp.
capri LC str. 95010]
Length = 648
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 37/266 (13%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKT 192
++ +Q Y+P+ +A ++ E+++ D++ + L+ +GQ G GKT
Sbjct: 2 NTNKQSLYRTYRPKDFNSVAGHNN----IKEILEKQIKDNR---INHALLFSGQRGTGKT 54
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE------NFVERIRR 246
+ R A + T + E +NCK +D E N V+ IR
Sbjct: 55 SVARIFAKTINCL-----NLTNSTACEQCNNCKLA-NQNQLIDIIEIDAASNNGVDEIRE 108
Query: 247 YGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKA 306
++ ++P SK + +ID++ + + AF L + L P +
Sbjct: 109 IKNSVSTLPLNSKYK-VYIIDEVHML-TKQAFNALLKTL------EEPPVYAIF------ 154
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
+ +T + + Q+IL + + I S+K L I QE Y + E +D +
Sbjct: 155 --ILATTEFNKIPQTIL--SRCQIFNFTKIDKNSLKNRLQYIANQENYQIEKEVLDEIFY 210
Query: 367 ASGGDIRQAITSLQFSSLKQDPMLNL 392
S G +R AI L+ L D ++ +
Sbjct: 211 LSEGSLRDAINILEQLMLAADDLITI 236
>gi|190345167|gb|EDK37005.2| hypothetical protein PGUG_01103 [Meyerozyma guilliermondii ATCC
6260]
Length = 327
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + VE ++ ++ G+ ++I+G G+GKT ++ +
Sbjct: 12 WVEKYRPHKLDDIVGNEETVERLKLIAQD--GNMPH------MIISGLPGIGKTTSIHCL 63
Query: 199 ASH-LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIPG 256
A LG +Y+ T LE + D + V +I+++ T S+P
Sbjct: 64 AYELLGKTMYDQAT----------------LELNASDDRGIDVVRNKIKQFAQTKISLP- 106
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I+L + +T G A + LR+ + + +T A C ++ +
Sbjct: 107 PGRHKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CNQSSKI------I 153
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E LQS + N + + + L +I + E +++ + + + GD+RQAI
Sbjct: 154 EPLQS-----RCAILRYNKLADDQVLSRLLEIAKAEDVKYNSQGLQALIFTAEGDMRQAI 208
Query: 377 TSLQ 380
++Q
Sbjct: 209 NNMQ 212
>gi|6324791|ref|NP_014860.1| replication factor C subunit 1 [Saccharomyces cerevisiae S288c]
gi|584899|sp|P38630.1|RFC1_YEAST RecName: Full=Replication factor C subunit 1; Short=Replication
factor C1; AltName: Full=Activator 1 95 kDa subunit;
AltName: Full=Cell division control protein 44
gi|437274|gb|AAC48916.1| Cdc44p [Saccharomyces cerevisiae]
gi|841462|gb|AAC49060.1| Rfc1p [Saccharomyces cerevisiae]
gi|1050769|emb|CAA63180.1| CDC44 [Saccharomyces cerevisiae]
gi|1420505|emb|CAA99434.1| RFC1 [Saccharomyces cerevisiae]
gi|256269587|gb|EEU04869.1| Rfc1p [Saccharomyces cerevisiae JAY291]
gi|259149697|emb|CAY86501.1| Rfc1p [Saccharomyces cerevisiae EC1118]
gi|285815096|tpg|DAA10989.1| TPA: replication factor C subunit 1 [Saccharomyces cerevisiae
S288c]
gi|392296545|gb|EIW07647.1| Rfc1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 861
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 39/254 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P +L+++ + V +++ W K+ F ++ G
Sbjct: 296 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPP 355
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A LG + E + K L+ S + F++ E
Sbjct: 356 GIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLN 415
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
G ++++D++ +G R +L Q R T P ++ E
Sbjct: 416 G-----------KHFVIIMDEVDGMSGGDRGGVGQLAQ----FCRKTSTPLILICNE--- 457
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ +D R+ N SIK L I +E++ L ID +
Sbjct: 458 -----RNLPKMRPFDRVCLDIQFRRPDAN-----SIKSRLMTIAIREKFKLDPNVIDRLI 507
Query: 366 QASGGDIRQAITSL 379
Q + GDIRQ I L
Sbjct: 508 QTTRGDIRQVINLL 521
>gi|291405540|ref|XP_002718988.1| PREDICTED: ATPase family, AAA domain containing 5 [Oryctolagus
cuniculus]
Length = 1849
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 31/102 (30%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWF---------EERL------------------- 169
LW EKY+P++ EL ++++ +W EE+
Sbjct: 1054 LWTEKYQPQNSSELVGNELAIKKLHSWLKDWKRRAELEEKQNLKGKREGKQEDVSDSLDF 1113
Query: 170 -GDSKDKFS--TNVLVITGQAGVGKTATVRQIASHLGARLYE 208
G S+D+ S N ++ITG GVGKTA V A LG +++E
Sbjct: 1114 QGSSEDEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|407926292|gb|EKG19259.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 352
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 52/247 (21%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + +E ++ +KD +V +I+G G+GKT ++ +
Sbjct: 29 WVEKYRPVFLDDIVGNTETIERLKII-------AKDGNMPHV-IISGMPGIGKTTSILCL 80
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSK----LDEFENFVERIRRYGSTSPSI 254
A L Y+ + LE + +D N ++ + T P
Sbjct: 81 ARQLLGDAYK----------------EAVLELNASDERGIDVVRNRIKGFAQKKVTLP-- 122
Query: 255 PGESKSSAILLIDDL-PVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
PG K I+++D+ +T+G A + LR+ + + +T A C +++ +
Sbjct: 123 PGRQK---IVILDEADSMTSG--AQQALRRTMEIYSSTTRFAFA-----CNQSNKI---- 168
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
E LQS + + +T+ + + L +IC EQ S + + + ++ GD+R
Sbjct: 169 --IEPLQS-----RCAILRYSRLTDAQLVKRLMQICGAEQVEYSEDGLAALVFSAEGDMR 221
Query: 374 QAITSLQ 380
QAI +LQ
Sbjct: 222 QAINNLQ 228
>gi|330417924|ref|NP_001193418.1| ATPase family AAA domain-containing protein 5 [Bos taurus]
Length = 1847
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF-------------------EE 167
DS+ S LW EKY+P++ EL ++++ +W +E
Sbjct: 1042 DSSKDSGIEDMLWTEKYQPQNSSELIGNELAIKKLHSWLKDWKRRAELEEGQNLKGKRDE 1101
Query: 168 RLGDSKD----KFST---------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
+ DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KQEDSLDSRDFKGSSDDEEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|225557253|gb|EEH05539.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 424
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 55/261 (21%)
Query: 141 EKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIAS 200
EKY+P SLEE++ + + + DK L++ G G GKT+T+ +A
Sbjct: 74 EKYRPNSLEEVSGHHDIISTINRFI--------DKNRLPHLLLYGPPGTGKTSTILALAR 125
Query: 201 HLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKS 260
R+Y + + E + G++ D+ + F ++ S +P+ ES
Sbjct: 126 ----RIYGVNNMRQMVL-ELNASDDRGIDVVR--DQIKTFAS-TKQIFSVAPTTKSESTL 177
Query: 261 SAILLI----DDLPVTNGRTAFERL--------RQCLLLLVRSTHIPTAVVLTECGKADS 308
A LI D + A R+ R C++ TH + +L+ C +
Sbjct: 178 GAFKLIILDEADAMTATAQMALRRIMEKYTANTRFCII--ANYTHKLSPALLSRCTR--- 232
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+P+ I+ + ++ +EQ + E ID + Q S
Sbjct: 233 ----------------------FRFSPLKEEDIRVLVDQVVEKEQVRIQPEAIDSLVQLS 270
Query: 369 GGDIRQAITSLQFSSLKQDPM 389
GD+R+A+ LQ P+
Sbjct: 271 KGDMRRALNVLQACHASSIPL 291
>gi|328722322|ref|XP_001945573.2| PREDICTED: replication factor C subunit 1-like [Acyrthosiphon
pisum]
Length = 745
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 102/276 (36%), Gaps = 60/276 (21%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEV-------RAWFEER--------------LGDSKDK 175
+LW EKYKP +L+++ Q + V ++W+ D
Sbjct: 195 KLWVEKYKPLTLKQIIGQTGEKSNVNKLANWLKSWYSNHGVGVNKKLTRPSPWAKDDNGA 254
Query: 176 FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLD 235
F L ++G GVGKT T + LG + E++ T
Sbjct: 255 FFKAAL-LSGSPGVGKTTTAHLVCKELGFDIVEFNASD-----------------TRSKK 296
Query: 236 EFENFVERIRRYGSTSPSIPGES--KSSAILL--IDDLPVTNGRTAFERLRQCLLLLVRS 291
+ +N V + S SP + G+S K A+L+ +D + R Q L++L+++
Sbjct: 297 QLQNNVSELLSSTSLSPFLGGKSVTKKHALLMDEVDGMAGNEDRGGV----QELIILIKN 352
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQ 351
P V+ C D L + D K L IK + IC +
Sbjct: 353 AKCP---VICMCN-----DRNHPKIRTLSNYCFDLRFHKPKLE-----QIKAAMMSICYK 399
Query: 352 EQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQD 387
E+ +S E + + ++ DIR + L + +D
Sbjct: 400 EKLKISPETLSSIIASTDNDIRLTLNHLSVVAAGKD 435
>gi|281350573|gb|EFB26157.1| hypothetical protein PANDA_000149 [Ailuropoda melanoleuca]
Length = 1823
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 32/103 (31%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWF---------EER-------------LGDSKD- 174
LW EKY+P++ EL ++++ +W EER L DS D
Sbjct: 1031 LWTEKYQPQNSSELIGNELAIKKLHSWLKDWKKRAELEERQNLKGKKDEKLEDLSDSIDF 1090
Query: 175 KFST---------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1091 KGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1133
>gi|448509973|ref|ZP_21615854.1| replication factor C small subunit, partial [Halorubrum distributum
JCM 9100]
gi|445696314|gb|ELZ48405.1| replication factor C small subunit, partial [Halorubrum distributum
JCM 9100]
Length = 208
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A+A+++ +++W EKY+P++L+++ Q + VE ++++ ++D L+ +G AG
Sbjct: 8 AAATATGREIWIEKYRPQTLDDIHGQEEIVERLQSYI------AQDDVPH--LLFSGPAG 59
Query: 189 VGKTATVRQIASHL 202
VGKT IA +
Sbjct: 60 VGKTTAATAIAREI 73
>gi|389845694|ref|YP_006347933.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
gi|448616684|ref|ZP_21665394.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
gi|388243000|gb|AFK17946.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
gi|445751339|gb|EMA02776.1| replication factor C small subunit [Haloferax mediterranei ATCC
33500]
Length = 330
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
+++W EKY+P++L+++ Q + VE +R++ E +D L+ G AGVGKT +
Sbjct: 16 REIWIEKYRPQTLDDIYGQEEIVERLRSYIE------RDDLPH--LLFAGPAGVGKTTSA 67
Query: 196 RQIASHL 202
IA L
Sbjct: 68 TAIARTL 74
>gi|66513962|ref|XP_623937.1| PREDICTED: replication factor C subunit 2 [Apis mellifera]
Length = 350
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 103/243 (42%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ ++ V + + ++ G+ + ++I G GVGKT T+ +
Sbjct: 38 WIEKYRPQVFSDIVGNEDTVSRLSVFAQQ--GNCPN------IIIAGPPGVGKTTTILCL 89
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPSIPGE 257
A L +++ + LE + D + V +I+ + ++P +
Sbjct: 90 ARILLGPIFK----------------EAVLELNASNDRGIDVVRNKIKMFAQKRVNLP-K 132
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K I+L + +T G A + LR+ + + +T A C +D + E
Sbjct: 133 GKHKIIILDEADSMTAG--AQQALRRTMEIYSNTTRFALA-----CNSSDKI------IE 179
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
+QS + +++ I + IC++E S + + ++ + + GD+RQA+
Sbjct: 180 PIQS-----RCAMLRYGKLSDAQILAKIIDICKKEDVSHTDDGLEAIVFTAQGDMRQALN 234
Query: 378 SLQ 380
+LQ
Sbjct: 235 NLQ 237
>gi|440905329|gb|ELR55719.1| ATPase family AAA domain-containing protein 5 [Bos grunniens mutus]
Length = 1847
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWF-------------------EE 167
DS+ S LW EKY+P++ EL ++++ +W +E
Sbjct: 1042 DSSKDSGIEDMLWTEKYQPQNSSELIGNELAIKKLHSWLKDWKRRAELEEGQNLKGKRDE 1101
Query: 168 RLGDSKD----KFST---------NVLVITGQAGVGKTATVRQIASHLGARLYE 208
+ DS D K S+ N ++ITG GVGKTA V A LG +++E
Sbjct: 1102 KQEDSLDSRDFKGSSDDEEENRLCNTVLITGPTGVGKTAAVYACAQELGFKIFE 1155
>gi|42560608|ref|NP_975059.1| DNA polymerase III subunits gamma/tau [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|42492104|emb|CAE76701.1| DNA polymerase III gamma-tau subunits [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
Length = 652
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 37/256 (14%)
Query: 143 YKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHL 202
Y+P+ +A ++ E+++ D++ + L+ +GQ G GKT+ R A +
Sbjct: 16 YRPKDFNSVAGHNN----IKEILEKQIKDNR---INHALLFSGQRGTGKTSVARIFAKTI 68
Query: 203 GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE------NFVERIRRYGSTSPSIPG 256
T + E +NCK +D E N V+ IR ++ ++P
Sbjct: 69 NCL-----NLTNSTACEQCNNCKLA-NQNQLIDIIEIDAASNNGVDEIREIKNSVSTLPL 122
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
SK + +ID++ + + AF L + L P + + +T +
Sbjct: 123 NSKYK-VYIIDEVHML-TKQAFNALLKTL------EEPPVYAIF--------ILATTEFN 166
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+ Q+IL + + I S+K L I QE Y + E +D + S G +R AI
Sbjct: 167 KIPQTIL--SRCQIFNFTKIDKNSLKNRLQYIANQENYQIEKEVLDEIFYLSEGSLRDAI 224
Query: 377 TSLQFSSLKQDPMLNL 392
L+ L D ++ +
Sbjct: 225 NILEQLMLATDDLITI 240
>gi|390366385|ref|XP_797949.2| PREDICTED: replication factor C subunit 1-like [Strongylocentrotus
purpuratus]
Length = 671
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 106/281 (37%), Gaps = 39/281 (13%)
Query: 124 PDHDSASASSSTQQLWAEKYKPRSLEELAVQ-------RKKVEEVRAWFEERLGDSKDK- 175
P ++A +W +KYKP S + + Q +K + +R W + G++K+K
Sbjct: 119 PGRGQSAAGGGQSLMWVDKYKPVSTKNIIGQQGDKSNAKKLLNWLRRWNDNNYGNNKEKA 178
Query: 176 -------FSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGL 228
F+ +++G GVGKT T + LG E + + L
Sbjct: 179 KFNRDAGFAFRAALLSGPPGVGKTTTATLVCQELGFSFIEQNASDSRGKKSLQGGIAESL 238
Query: 229 EYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLL 288
+ S D F+ + TS E L++D++ G +++ L+ +
Sbjct: 239 DNQSIADMFKKGCGK-----KTS-----EEGHKHCLIMDEVDGVAGNEDRGGIQE-LIQM 287
Query: 289 VRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKI 348
+++T P + D + L + D ++ + IK + I
Sbjct: 288 IKTTRTPIICICN--------DRSHPKIRSLVNYCFDLRFQRPRVP-----QIKSAMMSI 334
Query: 349 CRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDPM 389
+E ++ +D + A+ D+RQ + +L S Q M
Sbjct: 335 AYKEGLTVPPAALDGMIMAANQDVRQVLHNLSMWSAGQKKM 375
>gi|170589980|ref|XP_001899751.1| Activator 1 40 kDa subunit [Brugia malayi]
gi|158592877|gb|EDP31473.1| Activator 1 40 kDa subunit, putative [Brugia malayi]
Length = 326
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ L E+ ++ + A+ ++ G++ + ++I+G G GKT ++ +
Sbjct: 7 WVEKYRPKMLSEVVGNEFVIQRLAAFAKQ--GNTPN------IIISGPPGCGKTTSMWAL 58
Query: 199 ASH-LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP-G 256
A LG RL N E K + +I+ + + ++P G
Sbjct: 59 AREMLGDRLKNACLEL---------NASDDREIFFKFSGIDVVRNKIKTFAQSKVTLPPG 109
Query: 257 ESKSSAILLIDDL-PVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS 315
K I+++D++ +T G A + LR+ + + ++T A C ++ V QS
Sbjct: 110 RHK---IIILDEVDSMTEG--AQQALRRTMEIYSKTTRFTLA-----CNQSGKVIEPIQS 159
Query: 316 FEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQA 375
+ + + ++ I + L +IC E+ + ID + + GD+RQA
Sbjct: 160 RCAI-----------LRFSKLSEEQIVKRLLQICEAEKVTYDDSGIDALVFTAQGDMRQA 208
Query: 376 ITSLQ 380
+ +LQ
Sbjct: 209 LNNLQ 213
>gi|241951560|ref|XP_002418502.1| replication factor C subunit, putative [Candida dubliniensis CD36]
gi|223641841|emb|CAX43803.1| replication factor C subunit, putative [Candida dubliniensis CD36]
Length = 886
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 133 SSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERL--------GDSKDKFSTNVLVIT 184
++ +LW +++ P ++ +L + +++++++W E G++ D S ++I+
Sbjct: 329 AAKDKLWTDRHAPTNISQLCGNKGQIQKLQSWLENWFHNQARGFKGNASDPGSFRAVLIS 388
Query: 185 GQAGVGKTATVRQIASHLGARLYE 208
G G+GKT+ +A LG + E
Sbjct: 389 GPPGIGKTSAAHLVAKSLGFDIIE 412
>gi|45190411|ref|NP_984665.1| AEL196Wp [Ashbya gossypii ATCC 10895]
gi|44983307|gb|AAS52489.1| AEL196Wp [Ashbya gossypii ATCC 10895]
gi|374107881|gb|AEY96788.1| FAEL196Wp [Ashbya gossypii FDAG1]
Length = 333
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 103/272 (37%), Gaps = 67/272 (24%)
Query: 128 SASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQ 186
S A ++ W EKY+P SL+++ QR VE VR + +E RL L+ G
Sbjct: 2 SGVARNANNLPWIEKYRPDSLDDVYGQRDVVETVRKFVQEGRLPH---------LLFYGP 52
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIR 245
G GKT+T+ +A + + Y LE + D + V +I+
Sbjct: 53 PGTGKTSTICALAKEIYGKNYR----------------NMVLELNASDDRGIDVVRNQIK 96
Query: 246 RYGSTSPSIPGESKSSAILLID--DLPVTNGRTAFERL--------RQCLLLLVRSTHIP 295
+ ST SK ++++D D + + A R+ R C +L H
Sbjct: 97 EFASTRQIF---SKGFKLIILDEADAMTSAAQNALRRIIEKYTKNTRFC--ILANYAHKL 151
Query: 296 TAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYS 355
T +L+ C + P+ +I+R + I E
Sbjct: 152 TPALLSRCT-------------------------RFRFQPLAEAAIERRVLSIMAHEHLQ 186
Query: 356 LSTEQIDLVAQASGGDIRQAITSLQFSSLKQD 387
L+ + + + + GD+R+A+ LQ + D
Sbjct: 187 LTEDARAALLRLAAGDMRRALNVLQAAKATLD 218
>gi|384245951|gb|EIE19443.1| RFC1-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 480
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 56/328 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDS---------KDKFSTNVLVITGQAG 188
LW EK+KP+ +L + +R W + + + ++++G G
Sbjct: 1 LWVEKHKPQRSADLIGNPGLIGTIREWLQNWYTPAWELSCQFTCATYLTKKAIILSGPPG 60
Query: 189 VGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYG 248
+GKT++ IA LG E + + + K G+ + N ++ +
Sbjct: 61 IGKTSSALIIARELGFIPVEVNASDTR--NKADKSAKGGMA-----GKLANNIKELANNR 113
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQC-LLLLVRSTHIPTAVVLTECGKAD 307
+ + GE K L++D++ +G +A +R L+L +++ +P +
Sbjct: 114 ALTSGAQGEEKK-LCLIMDEV---DGMSAGDRGGVPDLILTIKAAKLPIICICN------ 163
Query: 308 SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQA 367
D Q + L++ ++ RK T+ I + L +IC++E ++ + + ++
Sbjct: 164 --DKYNQKLKSLRNHCLELDFRKP-----TSQQISKRLIQICQKEGLQVNESTLAALVES 216
Query: 368 SGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDETLSLFHA 427
S DIR + LQ L++ + ++ E K G G+D +S F A
Sbjct: 217 SNADIRLMLGQLQMIRLRKRSL----------SYDEAKMGG--------GKDADMSPFEA 258
Query: 428 LGKFLHNKRE----TDNLVKMDQDAFVV 451
K L + E D + + QDA +V
Sbjct: 259 GRKLLSLESEKMSLNDRIDLVFQDADLV 286
>gi|326481689|gb|EGE05699.1| replication factor C subunit 4 [Trichophyton equinum CBS 127.97]
Length = 352
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
D + A + + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 DLSGAPVNYELPWVEKYRPIFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIR 245
G+GKT ++ +A L Y+ + LE + + + V RI+
Sbjct: 70 PGIGKTTSILCLARQLLGDTYK----------------EAVLELNASDERGIDVVRNRIK 113
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ ++P + ++L + +T+G A + LR+ + + +T A C +
Sbjct: 114 GFAQKKVTLP-PGRHKLVILDEADSMTSG--AQQALRRTMEIFSTTTRFAFA-----CNQ 165
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
++ + E LQS + + +T+ + + L +IC E+ S + I +
Sbjct: 166 SNKI------IEPLQS-----RCAILRYSRLTDAQVVKRLMQICEAEKVKYSDDGIAALV 214
Query: 366 QASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 215 FSAEGDMRQAINNLQ 229
>gi|326472467|gb|EGD96476.1| DNA replication factor C subunit [Trichophyton tonsurans CBS
112818]
Length = 352
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
D + A + + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 DLSGAPVNYELPWVEKYRPIFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIR 245
G+GKT ++ +A L Y+ + LE + + + V RI+
Sbjct: 70 PGIGKTTSILCLARQLLGDTYK----------------EAVLELNASDERGIDVVRNRIK 113
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ ++P + ++L + +T+G A + LR+ + + +T A C +
Sbjct: 114 GFAQKKVTLP-PGRHKLVILDEADSMTSG--AQQALRRTMEIFSTTTRFAFA-----CNQ 165
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
++ + E LQS + + +T+ + + L +IC E+ S + I +
Sbjct: 166 SNKI------IEPLQS-----RCAILRYSRLTDAQVVKRLMQICEAEKVKYSDDGIAALV 214
Query: 366 QASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 215 FSAEGDMRQAINNLQ 229
>gi|327297458|ref|XP_003233423.1| DNA replication factor C subunit [Trichophyton rubrum CBS 118892]
gi|326464729|gb|EGD90182.1| DNA replication factor C subunit [Trichophyton rubrum CBS 118892]
Length = 352
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
D + A + + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 DLSGAPVNYELPWVEKYRPIFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIR 245
G+GKT ++ +A L Y+ + LE + + + V RI+
Sbjct: 70 PGIGKTTSILCLARQLLGDTYK----------------EAVLELNASDERGIDVVRNRIK 113
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ ++P + ++L + +T+G A + LR+ + + +T A C +
Sbjct: 114 GFAQKKVTLP-PGRHKLVILDEADSMTSG--AQQALRRTMEIFSTTTRFAFA-----CNQ 165
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
++ + E LQS + + +T+ + + L +IC E+ S + I +
Sbjct: 166 SNKI------IEPLQS-----RCAILRYSRLTDAQVVKRLMQICEAEKVKYSDDGIAALV 214
Query: 366 QASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 215 FSAEGDMRQAINNLQ 229
>gi|374633940|ref|ZP_09706305.1| DNA polymerase III, gamma/tau subunit [Metallosphaera
yellowstonensis MK1]
gi|373523728|gb|EHP68648.1| DNA polymerase III, gamma/tau subunit [Metallosphaera
yellowstonensis MK1]
Length = 326
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 43/246 (17%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LWAEKY+P+SL+++ Q+ VE ++ + +E+ + L+ G G GKT +
Sbjct: 6 LWAEKYRPKSLDDIVNQKDIVERLKKFVKEK--------NMPHLLFAGPPGTGKTTSALA 57
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
+ L Y ++Y E +D N V+ R T +P +
Sbjct: 58 LVYDLYGENY----------RQYFLELNASDE--RGIDVIRNKVKDFAR-TVTPQDVPFK 104
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
+ +L+D+ A + LR+ + L +T A C + QS
Sbjct: 105 T-----VLLDEADNMTA-DAQQALRRTMELYTETTRFILA-----CNYLSKIIDPIQSRT 153
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
L P+ + L I + E+ + +D + + + GD+R+AI
Sbjct: 154 AL-----------FRFYPLKKEDVISRLEFIAKNEKVEYDPKALDTIYEITSGDMRKAIN 202
Query: 378 SLQFSS 383
LQ SS
Sbjct: 203 ILQASS 208
>gi|410074367|ref|XP_003954766.1| hypothetical protein KAFR_0A01930 [Kazachstania africana CBS 2517]
gi|372461348|emb|CCF55631.1| hypothetical protein KAFR_0A01930 [Kazachstania africana CBS 2517]
Length = 780
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 115/303 (37%), Gaps = 73/303 (24%)
Query: 123 NPDHDSASASSST------QQLWAEKYKPRSLEELAVQRKKVEEVRAW--------FEER 168
N D + A+ SST Q+LW EK++P+S +L K + W F+E+
Sbjct: 112 NNDEERANVLSSTNSKKRPQKLWVEKWRPKSFIDLVGNEKTNRRILGWLRQWSYAVFKEQ 171
Query: 169 LGDSKDKFSTN---------------VLVITGQAGVGKTATVRQIASHLG---ARLYEWD 210
L + K N +L+I G G+GKT+ + G A + D
Sbjct: 172 LPELPQKTHNNEVTVDMDPLQRPNKKILLIHGPPGIGKTSVAHVVTKQAGFSVAEINASD 231
Query: 211 TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSP------SIPGESKSSAIL 264
++ +HN T +T S SP I G +S I
Sbjct: 232 ERAGQFVKDKVHN--TLFNHTF----------------SDSPVCLIADEIDGSVESGFIR 273
Query: 265 LIDDLPVTNGRTAFERLRQCLLLLVRS------THIPTAVVLTECGKADSVDSTAQSFEE 318
++ D+ + A RLR +S ++ ++ C + A + E+
Sbjct: 274 VLIDI-INKDNKATNRLRYLANTQTKSKDKKRRKNLLVRPIIAICN-----NLYAPALEK 327
Query: 319 LQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAITS 378
L+ ++ ++ +++ L IC +E+ + + I+ + + GD+R I +
Sbjct: 328 LKQ-----HCEIISFKRPSDNALQERLEHICSKERLDVPIKTINDLIDLAQGDVRNCINN 382
Query: 379 LQF 381
LQF
Sbjct: 383 LQF 385
>gi|389580378|ref|ZP_10170405.1| DNA polymerase III, subunit gamma/tau [Desulfobacter postgatei
2ac9]
gi|389402013|gb|EIM64235.1| DNA polymerase III, subunit gamma/tau [Desulfobacter postgatei
2ac9]
Length = 589
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 53/257 (20%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVR 196
Q+ A KY+P++ E+ Q + V + ++ + L++ G G GKT R
Sbjct: 4 QVLALKYRPQTFSEVVGQ----DHVTTTLTNAISGNR---VPHALLLAGPRGTGKTTIAR 56
Query: 197 QIASHLGARLYEWDTPTP----TIWQEYMH-NCKTGLEYTSKLDEFENFVERIRRYGSTS 251
+A + + TP+P TI ++ ++ +C E + N VE+IR
Sbjct: 57 IMAKAMTCQ--TGPTPSPCNECTICKDIINGHCADVFEIDGASN---NSVEQIRELRDNV 111
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCL------LLLVRST---HIPTAVVLTE 302
+P ++ I +ID++ + + AF L + L +L + +T H A +L+
Sbjct: 112 AYMPSAARYK-IYIIDEVHMLS-VAAFNALLKTLEEPPAHVLFIFATTEIHKIPATILSR 169
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C + D L I +D I L +CR+E Y++ T+ ++
Sbjct: 170 CQRHD-----------LSRIALD--------------RICAHLGDLCRKEGYTVETKGLE 204
Query: 363 LVAQASGGDIRQAITSL 379
L+A + G IR ++ L
Sbjct: 205 LIALEADGSIRDGLSLL 221
>gi|448424755|ref|ZP_21582611.1| replication factor C small subunit, partial [Halorubrum terrestre
JCM 10247]
gi|445681965|gb|ELZ34390.1| replication factor C small subunit, partial [Halorubrum terrestre
JCM 10247]
Length = 223
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A+A+++ +++W EKY+P++L+++ Q + VE ++++ ++D L+ +G AG
Sbjct: 8 AAATATGREIWIEKYRPQTLDDIHGQEEIVERLQSYI------AQDDVPH--LLFSGPAG 59
Query: 189 VGKTATVRQIASHL 202
VGKT IA +
Sbjct: 60 VGKTTAATAIAREI 73
>gi|315044711|ref|XP_003171731.1| replication factor C subunit 4 [Arthroderma gypseum CBS 118893]
gi|311344074|gb|EFR03277.1| replication factor C subunit 4 [Arthroderma gypseum CBS 118893]
Length = 354
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
D + A + + W EKY+P L+++ + +E ++ ++D +V +I+G
Sbjct: 18 DLSGAPVNYELPWVEKYRPIFLDDVVGNTETIERLKII-------ARDGNMPHV-IISGM 69
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIR 245
G+GKT ++ +A L Y+ + LE + + + V RI+
Sbjct: 70 PGIGKTTSILCLARQLLGDTYK----------------EAVLELNASDERGIDVVRNRIK 113
Query: 246 RYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
+ ++P + ++L + +T+G A + LR+ + + +T A C +
Sbjct: 114 GFAQKKVTLP-PGRHKLVILDEADSMTSG--AQQALRRTMEIFSTTTRFAFA-----CNQ 165
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
++ + E LQS + + +T+ + + L +IC E+ S + I +
Sbjct: 166 SNKI------IEPLQS-----RCAILRYSRLTDAQVVKRLMQICEAEKVKYSDDGIAALV 214
Query: 366 QASGGDIRQAITSLQ 380
++ GD+RQAI +LQ
Sbjct: 215 FSAEGDMRQAINNLQ 229
>gi|307179094|gb|EFN67566.1| Replication factor C subunit 2 [Camponotus floridanus]
Length = 349
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 45/260 (17%)
Query: 123 NPDHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVL 181
N D S +Q L W EKY+P+ ++ V RL +T +
Sbjct: 21 NSDMKIKEKDSKSQNLPWIEKYRPQVFSDIVGNEDTVS--------RLAVFAQHGNTPNI 72
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+I G GVGKT T+ +A L ++ + LE + + + V
Sbjct: 73 IIAGPPGVGKTTTILCLARILLGPAFK----------------EAVLELNASNERGIDVV 116
Query: 242 -ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVL 300
+I+ + ++P + K I+L + +T+G A + LR+ + + +T A
Sbjct: 117 RNKIKMFAQKKVNLP-KGKHKIIILDEADSMTDG--AQQALRRTMEIYSHTTRFALAC-- 171
Query: 301 TECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQ 360
++T + E +QS + +T+ I + ++C +E+ S + +
Sbjct: 172 ---------NNTEEIIEPIQS-----RCAMLRYGKLTDAQILAKVLEVCEKEKLSYTDDG 217
Query: 361 IDLVAQASGGDIRQAITSLQ 380
++ + + GD+RQA+ +LQ
Sbjct: 218 MEAIVFTAQGDMRQALNNLQ 237
>gi|301320577|gb|ADK69220.1| DNA polymerase III, subunit gamma and tau [Mycoplasma mycoides
subsp. mycoides SC str. Gladysdale]
Length = 648
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 37/256 (14%)
Query: 143 YKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHL 202
Y+P+ +A ++ E+++ D++ + L+ +GQ G GKT+ R A +
Sbjct: 12 YRPKDFNSVAGHNN----IKEILEKQIKDNR---INHALLFSGQRGTGKTSVARIFAKTI 64
Query: 203 GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE------NFVERIRRYGSTSPSIPG 256
T + E +NCK +D E N V+ IR ++ ++P
Sbjct: 65 NCL-----NLTNSTACEQCNNCKLA-NQNQLIDIIEIDAASNNGVDEIREIKNSVSTLPL 118
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
SK + +ID++ + + AF L + L P + + +T +
Sbjct: 119 NSKYK-VYIIDEVHML-TKQAFNALLKTL------EEPPVYAIF--------ILATTEFN 162
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
+ Q+IL + + I S+K L I QE Y + E +D + S G +R AI
Sbjct: 163 KIPQTIL--SRCQIFNFTKIDKNSLKNRLQYIANQENYQIEKEVLDEIFYLSEGSLRDAI 220
Query: 377 TSLQFSSLKQDPMLNL 392
L+ L D ++ +
Sbjct: 221 NILEQLMLATDDLITI 236
>gi|448456886|ref|ZP_21595542.1| replication factor C small subunit [Halorubrum lipolyticum DSM
21995]
gi|445811483|gb|EMA61490.1| replication factor C small subunit [Halorubrum lipolyticum DSM
21995]
Length = 762
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 131 ASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVG 190
A+++ +++W EKY+P+SL+++ Q VE ++++ D+ L+ +G AGVG
Sbjct: 10 ATATGREIWIEKYRPQSLDDIHGQEAIVERLQSYI--------DQDDIPHLLFSGPAGVG 61
Query: 191 KTATVRQIASHL 202
KT IA +
Sbjct: 62 KTTAATAIARQV 73
>gi|367013632|ref|XP_003681316.1| hypothetical protein TDEL_0D05210 [Torulaspora delbrueckii]
gi|359748976|emb|CCE92105.1| hypothetical protein TDEL_0D05210 [Torulaspora delbrueckii]
Length = 322
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 44/243 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L+++ + VE RL + ++I+G G+GKT +V +
Sbjct: 13 WVEKYRPEKLKDIVGNEETVE--------RLEQIAKDGNMPHMIISGLPGIGKTTSVHCL 64
Query: 199 ASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPGE 257
A L + Y + LE + D + V +I+ + +P
Sbjct: 65 AHELLGKSY----------------SQAVLELNASDDRGIDVVRNQIKHFAQKKCHLP-P 107
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
K I+L + +T G A + LR+ + L +T A C +++ + E
Sbjct: 108 GKHKIIILDEADSMTAG--AQQALRRTMELYSNTTRFAFA-----CNQSNKI------IE 154
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
LQS + + +++ + + L +I + E S + + ++ + + GD+RQAI
Sbjct: 155 PLQS-----RCAILRYSKLSDEQVLKRLMEIIKAENVSFTNDGLEAIIFTAEGDMRQAIN 209
Query: 378 SLQ 380
+LQ
Sbjct: 210 NLQ 212
>gi|355571939|ref|ZP_09043147.1| Replication factor C [Methanolinea tarda NOBI-1]
gi|354825035|gb|EHF09270.1| Replication factor C [Methanolinea tarda NOBI-1]
Length = 346
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P S EE+ Q + V + + R S +++ G G GK+ +V
Sbjct: 2 LWIEKYRPGSFEEIVGQERVVRRMSHFAAAR--------SVPHMILAGPPGTGKSVSVEC 53
Query: 198 IASHL-GARLYEWDTPTPTIWQEYMHNCKTGLE--------YTSKLDEFENFVERIRRYG 248
+A+ L G E T PT + + LE Y + NF IR Y
Sbjct: 54 LANALYGDFAPENLTVIPT--SDLFSQGRKFLEREERYAHLYRPEESVLSNFKRIIREYA 111
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
S P + E K LL+ + + R A + LR+ ++ RS+ V T C +
Sbjct: 112 SLKP-LDAEFK----LLVFEGASSLPREAQQALRR---IMERSSRTCRFVYCT-CHPSAI 162
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQE---QYSLSTEQIDLVA 365
+ + A L +PI + + L I +E + ++ + + LV
Sbjct: 163 IPAIASRCLPL------------FFSPIPDDLVASHLRMIIDRERGPENTVGNDDLGLVV 210
Query: 366 QASGGDIRQAITSLQFSS 383
A+ GD+R+A+ LQ S
Sbjct: 211 AAAHGDLRKAVMLLQVLS 228
>gi|349581374|dbj|GAA26532.1| K7_Rfc1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 860
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 39/254 (15%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW KY P +L+++ + V +++ W K+ F ++ G
Sbjct: 296 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNGFKHAGKDGSGVFRAAMLYGPP 355
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A LG + E + K L+ S + F++ E
Sbjct: 356 GIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLN 415
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNG--RTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
G ++++D++ +G R +L Q R T P ++ E
Sbjct: 416 G-----------KHFVIIMDEVDGMSGGDRGGVGQLAQ----FCRKTSTPLILICNE--- 457
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
+ +D R+ N SIK L I +E++ L ID +
Sbjct: 458 -----RNLPKMRPFDRVCLDIQFRRPDAN-----SIKSRLMTIAIREKFKLDPNVIDRLI 507
Query: 366 QASGGDIRQAITSL 379
Q + GDIRQ I L
Sbjct: 508 QTTRGDIRQVINLL 521
>gi|323331653|gb|EGA73067.1| Rfc4p [Saccharomyces cerevisiae AWRI796]
Length = 264
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
S + S Q W EKY+P+ L ++ ++ ++ ++ +KD + ++I+G G+
Sbjct: 2 SKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQI-------AKDGNMPH-MIISGMPGI 53
Query: 190 GKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYG 248
GKT +V +A L R Y LE + D + V +I+ +
Sbjct: 54 GKTTSVHCLAHELLGRSY----------------ADGVLELNASDDRGIDVVRNQIKHFA 97
Query: 249 STSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADS 308
+P K ++L + +T G A + LR+ + L ST A C +++
Sbjct: 98 QKKLHLP-PGKHKIVILDEADSMTAG--AQQALRRTMELYSNSTRFAFA-----CNQSNK 149
Query: 309 VDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQAS 368
+ E LQS + + +++ + + L +I + E + + ++ + +
Sbjct: 150 I------IEPLQS-----RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA 198
Query: 369 GGDIRQAITSLQ 380
GD+RQAI +LQ
Sbjct: 199 EGDMRQAINNLQ 210
>gi|365174353|ref|ZP_09361803.1| hypothetical protein HMPREF1006_01506 [Synergistes sp. 3_1_syn1]
gi|363615290|gb|EHL66758.1| hypothetical protein HMPREF1006_01506 [Synergistes sp. 3_1_syn1]
Length = 440
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 104/257 (40%), Gaps = 68/257 (26%)
Query: 140 AEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIA 199
AE+ +PR+L+E A Q + RA L D ++ G GVGKT VR IA
Sbjct: 22 AERMRPRTLDEYAGQGHILAPGRA-----LRSMLDGGKAPSCILYGPPGVGKTTLVRLIA 76
Query: 200 SHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESK 259
G L E + ++K++ + +ER R GE K
Sbjct: 77 RVTGRTLLEINA------------------VSAKVETLRDLLERAR----------GEKK 108
Query: 260 ---SSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQS- 315
SAI +D++ F +Q +LL E G + +T ++
Sbjct: 109 LSGRSAIAFVDEI------YHFNSKQQNVLLPA-----------VETGDLILIGTTTENP 151
Query: 316 -FEELQSILVDAGARKVA--LNPITN----GSIKRTLSKICR---QEQYSLSTEQIDLVA 365
FE +++L +R V L P+ N G ++R L R + TE I+ +A
Sbjct: 152 WFEINKTLL----SRMVVYTLEPLKNEDICGLLRRALDDTERGLGRFGVRAETETIERIA 207
Query: 366 QASGGDIRQAITSLQFS 382
+GGD RQA+T L+ S
Sbjct: 208 ALAGGDARQALTRLEAS 224
>gi|451996322|gb|EMD88789.1| hypothetical protein COCHEDRAFT_1196708 [Cochliobolus
heterostrophus C5]
Length = 1070
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 108/267 (40%), Gaps = 45/267 (16%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE---------RLGDSKDKFSTNVLVITGQA 187
+LW KY P SL + + VE ++ W + +L ++I G
Sbjct: 476 RLWTTKYAPTSLAHICGNKASVERLQRWLQAFPKSLKTGFKLAGKDGSGVFRAVMIHGPP 535
Query: 188 GVGKTATVRQIASHLGARLYEWD----TPTPTIWQEYMHNCKTGLEYTSKLDEFENFVER 243
G+GKT A+HL A+L +D + T ++ + + G+ T+ L +
Sbjct: 536 GIGKT-----TAAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLSTNSLHGY------ 584
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLV-RSTHIPTAVVLTE 302
+ + G SK +L++D++ +G +A +R L V + T +P ++
Sbjct: 585 ---FAGDGKKVEG-SKKKLVLIMDEV---DGMSAGDRGGVGALAAVCKKTEVPMILI--- 634
Query: 303 CGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
C D + + D R+ ++ ++ + I +E +ST I+
Sbjct: 635 CN-----DRRQPKMKPFDYVTFDLPFRRPTVD-----QVRSRIMTIAFREGLKMSTPVIN 684
Query: 363 LVAQASGGDIRQAITSLQFSSLKQDPM 389
+ + S DIRQ + + + + Q+ M
Sbjct: 685 ALIEGSHSDIRQVVNMISTAKIDQEVM 711
>gi|409051889|gb|EKM61365.1| hypothetical protein PHACADRAFT_111883 [Phanerochaete carnosa
HHB-10118-sp]
Length = 342
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 44/255 (17%)
Query: 127 DSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQ 186
+ +AS + W EKY+P++L+++ + +E ++ R G+ ++++G
Sbjct: 11 NGTAASLPYELPWVEKYRPKTLDDVVGNSETIERLKVV--ARDGNCPH------IILSGL 62
Query: 187 AGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRR 246
G+GKT ++ +A L Y+ E +D N V+ +
Sbjct: 63 PGIGKTTSIHCLAHQLLGDAYKEGVLELNASDE------------RGIDVVRNKVKAFAQ 110
Query: 247 YGSTSPSIPGESKSSAILLIDDL-PVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGK 305
T P PG K I+++D+ +T G A + LR+ + + +T A C
Sbjct: 111 KKVTLP--PGRHK---IVILDEADSMTPG--AQQALRRTMEIFANTTRFALA-----CNM 158
Query: 306 ADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVA 365
++ + QS +IL A R + + R L +IC E + + + +
Sbjct: 159 SNKIIEPIQS---RCAILRYAKLR--------DAEVLRRLLEICEMEGVKYNDDGLTALI 207
Query: 366 QASGGDIRQAITSLQ 380
+ GD+RQAI +LQ
Sbjct: 208 FTAEGDMRQAINNLQ 222
>gi|326782422|ref|YP_004322822.1| clamp loader subunit [Synechococcus phage S-ShM2]
gi|310003370|gb|ADO97767.1| clamp loader subunit [Synechococcus phage S-ShM2]
Length = 313
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P++++E + + +++ + F E+ G+ + L+++G AG+GKT +
Sbjct: 5 LWVEKYRPQTIDE-CILPDETKDIFSGFVEQ-GEIPN------LLLSGTAGIGKTTIAKA 56
Query: 198 IASHLGA 204
+ +HLGA
Sbjct: 57 LCTHLGA 63
>gi|206895474|ref|YP_002247556.1| ATPase AAA [Coprothermobacter proteolyticus DSM 5265]
gi|206738091|gb|ACI17169.1| AAA ATPase, central region [Coprothermobacter proteolyticus DSM
5265]
Length = 459
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 62/283 (21%)
Query: 113 LTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRK---KVEEVRAWFEERL 169
+T +RF+ DS SS AE+ +PR+L+E+ Q K K +R EE
Sbjct: 1 MTDNRFQ-------DSLFKPSSKWIPLAERMRPRTLDEIVGQDKAFGKGTLLRKLIEE-- 51
Query: 170 GDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTI--WQEYMHNCKTG 227
DK ++ LV+ G GVGKT+ IA+ AR + T I +E + + +
Sbjct: 52 ----DKLTS--LVLWGPPGVGKTSIAMVIANTTKARFLRFSAVTSGIKEIKEVLEDAEVQ 105
Query: 228 LEYTSKLDEFENFVERIRRYGSTSPS--IPGESKSSAILLIDDLPVTNGRTAFERLRQCL 285
+ FV+ I + T +P K + +L+ T +FE +
Sbjct: 106 FNMGRRT---VIFVDEIHHFNKTQQDAFLPYVEKGAVVLIC----ATTENPSFEIISP-- 156
Query: 286 LLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTL 345
LL RS VV+ E +A E++++IL A A K +R L
Sbjct: 157 -LLSRSK-----VVVLEPLEA----------EDIKTILYRALADK-----------ERGL 189
Query: 346 SKICRQEQYSLSTEQIDLVAQASGGDIRQAITSLQFSSLKQDP 388
E+ ++ EQ+ +A S GD R A+ +L+ + DP
Sbjct: 190 G----NERVVITDEQLMRIAVYSDGDARIALNTLEMAVFGTDP 228
>gi|348517074|ref|XP_003446060.1| PREDICTED: replication factor C subunit 2-like [Oreochromis
niloticus]
Length = 357
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 50/246 (20%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P L E+ + V + + E G+ + ++I G G GKT ++ +
Sbjct: 41 WVEKYRPLKLNEIVGNEETVSRLEVFARE--GNVPN------IIIAGPPGTGKTTSILCL 92
Query: 199 A-SHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A + LG + + LE + D + V +I+ + ++P
Sbjct: 93 ARALLGTSMKD-----------------AVLELNASNDRGIDVVRNKIKMFAQQKVTLP- 134
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ + I+L + +T+G A + LR+ + + ++T A C +D +
Sbjct: 135 KGRHKIIILDEADSMTDG--AQQALRRIMEIYSKTTRFALA-----CNASDKI------I 181
Query: 317 EELQSILVDAGARKVAL--NPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E +QS R L + +T+G I L ++ +E+ S+S + ++ + + GD+RQ
Sbjct: 182 EPIQS-------RCAVLRYSKLTDGQILVRLQEVVEKERLSVSDDGLEAIIFTAQGDMRQ 234
Query: 375 AITSLQ 380
A+ +LQ
Sbjct: 235 ALNNLQ 240
>gi|269986185|gb|EEZ92497.1| Replication factor C [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 315
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 50/246 (20%)
Query: 138 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQ 197
LW EKY+P+S +E+ Q++ VE+++A E++ ++++G GVGKT +
Sbjct: 3 LWIEKYRPQSFDEIIGQKEIVEKLKAMAEKK--------EIQHMILSGPPGVGKTTS--- 51
Query: 198 IASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A L ++ D W + +E + D + ++ +++ + T P I
Sbjct: 52 -AVVLAKAVFGPD------W------TQNFIELNASDDRKLSVIQGKVKEFARTKP-IDA 97
Query: 257 ESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ 314
K I+L D D + A R+ + +I T C SV+ +
Sbjct: 98 PFK---IILFDEADSLTQEAQQALRRMME--------EYINT------CRFVFSVNYQSN 140
Query: 315 SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQ 374
E LQS + P++ + + + +I E+ + E +D + S GD+R
Sbjct: 141 IIEPLQS-----RCAILRFQPLSKEDVHKFIKRIAESEKLDIDKEAMDALDYVSRGDLRT 195
Query: 375 AITSLQ 380
+ +Q
Sbjct: 196 LVNLMQ 201
>gi|448450551|ref|ZP_21592370.1| replication factor C small subunit [Halorubrum litoreum JCM 13561]
gi|448522065|ref|ZP_21618330.1| replication factor C small subunit [Halorubrum distributum JCM
10118]
gi|445702339|gb|ELZ54293.1| replication factor C small subunit [Halorubrum distributum JCM
10118]
gi|445811665|gb|EMA61668.1| replication factor C small subunit [Halorubrum litoreum JCM 13561]
Length = 327
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 129 ASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAG 188
A+A+++ +++W EKY+P++L+++ Q + VE ++++ ++D L+ +G AG
Sbjct: 8 AAATATGREIWIEKYRPQTLDDIHGQEEIVERLQSYI------AQDDVPH--LLFSGPAG 59
Query: 189 VGKTATVRQIASHL 202
VGKT IA +
Sbjct: 60 VGKTTAATAIAREI 73
>gi|448467531|ref|ZP_21599543.1| replication factor C small subunit [Halorubrum kocurii JCM 14978]
gi|445812407|gb|EMA62401.1| replication factor C small subunit [Halorubrum kocurii JCM 14978]
Length = 327
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 130 SASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGV 189
+A+++ +++W EKY+P+SL+++ Q + VE ++++ E +D L+ +G AGV
Sbjct: 9 AATATGREIWIEKYRPQSLDDIHGQEEIVERLQSYIE------QDDIPH--LLFSGPAGV 60
Query: 190 GKTATVRQIASHL 202
GKT IA +
Sbjct: 61 GKTTASTAIARQV 73
>gi|448611174|ref|ZP_21661808.1| replication factor C small subunit [Haloferax mucosum ATCC
BAA-1512]
gi|445743606|gb|ELZ95087.1| replication factor C small subunit [Haloferax mucosum ATCC
BAA-1512]
Length = 379
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 109 VGRFLTPSRFEGLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEER 168
+GRF+ + G+V + + + +++W EKY+P++L+++ Q + VE + ++ E
Sbjct: 40 LGRFMCGA-VRGMVMSEAAESGDVPAGREIWIEKYRPQTLDDIYGQEEIVERLCSYIE-- 96
Query: 169 LGDSKDKFSTNVLVITGQAGVGKTATVRQIA 199
+D L+ G AGVGKT + IA
Sbjct: 97 ----RDDLPH--LLFAGPAGVGKTTSATAIA 121
>gi|296108938|ref|YP_003615887.1| ATPase AAA [methanocaldococcus infernus ME]
gi|295433752|gb|ADG12923.1| AAA ATPase central domain protein [Methanocaldococcus infernus ME]
Length = 483
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PRSL+++ K E ++ W E + K+K +++ G GVGKT +
Sbjct: 4 WIEKYRPRSLKDVVGHEKVKERLKRWIESFIKGKKEK----PILLYGPPGVGKTTLAYAL 59
Query: 199 ASHLG 203
A+ G
Sbjct: 60 ANDYG 64
>gi|149914971|ref|ZP_01903500.1| ATPase, AAA family protein, putative [Roseobacter sp. AzwK-3b]
gi|149811159|gb|EDM70996.1| ATPase, AAA family protein, putative [Roseobacter sp. AzwK-3b]
Length = 279
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE--YMHNCKTGLEYTSKLDEFE 238
L++ G+ G GKT RQ+A LG R+ EW+ + T Q+ Y ++ + L + DE
Sbjct: 29 LLVKGEPGTGKTELARQVAQALGLRMIEWNIKSTTKAQQGLYEYDAVSRLRDSQLGDERV 88
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDL 269
+ V R G + E+ +LLID++
Sbjct: 89 HDVRNYIRKGKLWEAF--ETDEKVVLLIDEI 117
>gi|344303101|gb|EGW33375.1| hypothetical protein SPAPADRAFT_71228 [Spathaspora passalidarum
NRRL Y-27907]
Length = 878
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 106/268 (39%), Gaps = 36/268 (13%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFST---------NVLVITGQA 187
+LW +K+ P S +L + ++ ++R W + + K F+ ++I+G
Sbjct: 327 KLWTDKHAPTSTSQLCGNKGQIAKLRNWLDNWFENQKHGFTKAGKDGSGVYRAVLISGPP 386
Query: 188 GVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRY 247
G+GKT +A+ LG + E + K+ L+ TS + F+ + ++
Sbjct: 387 GIGKTTAAHLVANELGYDVLEKNASDVRSKSLLNATVKSILDNTSVVGFFKQRED--KQL 444
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQ-CLLLLVRSTHIPTAVVLTECGKA 306
G S I L++D++ +G ++ + L R TH+P ++ C
Sbjct: 445 GDNSKKI--------CLIMDEV---DGMSSGDHGGAGALSQFCRITHMPMILI---CN-- 488
Query: 307 DSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ 366
D + + D R+ + +K L I +E L I + Q
Sbjct: 489 ---DKSLPKMRTFDRVCFDLPFRRP-----SEQEVKSRLMTIALREGVKLDPNIIGQLVQ 540
Query: 367 ASGGDIRQAITSLQFSSLKQDPMLNLSL 394
A+ DIRQ I + S Q + N +L
Sbjct: 541 ATSNDIRQMINLMSQVSKTQKAIGNATL 568
>gi|156359338|ref|XP_001624727.1| predicted protein [Nematostella vectensis]
gi|156211524|gb|EDO32627.1| predicted protein [Nematostella vectensis]
Length = 793
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 155/414 (37%), Gaps = 77/414 (18%)
Query: 138 LWAEKYKPRSLEELAVQ-------RKKVEEVRAWFEER---------LGDSKDKFSTNVL 181
+W +KYKP ++++ Q RK + VR W + R D S
Sbjct: 224 MWVDKYKPSGIKQIIGQQGDKSNMRKLLNWVRNWHKNRTKTLPKSSFFNKDTDGASLKAA 283
Query: 182 VITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV 241
+++G GVGKT T + LG E + + L S +D F
Sbjct: 284 LLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSKKTLEQVVSESLSNKS-MDAF---- 338
Query: 242 ERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLT 301
GS ++ +S +LL+D++ G +++ L+ L++++ IP ++
Sbjct: 339 -----VGS---NLAAKSGLKHVLLMDEVDGMAGSEDRGGMQE-LISLIKTSKIP---IIC 386
Query: 302 ECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQI 361
C D +Q L + D + + IK + I +E + +
Sbjct: 387 MCN-----DRNSQKIRSLANYCFDLRFSRPRVE-----QIKGAMMSIAYKEGIKIPPPAM 436
Query: 362 DLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEKADGHGGFSIQFGRDET 421
D + Q + DIRQ + ++ + N +L+ + +E ++ +D
Sbjct: 437 DQIIQGANQDIRQVLHNMSMWT-----ATNKTLTYDQAK--QEASNAQ--------KDIK 481
Query: 422 LSLFHALGKFLHNKRETDNLVKMDQDAFVVKDKFSRLPLKMDAPEKVL----SQAHGQAR 477
L F A+ K L + +K D F +S +PL + E L SQA G +
Sbjct: 482 LGPFDAIRKLLSGSDSSKLSLKDKSDLFFC--DYSLMPLFVQ--ENYLMVSPSQASGDLK 537
Query: 478 PVLDFLHEN----CWLDI----MRQTMFYNLLRLQLLLVEYYLEILIQCLLGGM 523
LD + C D+ +R ++LL +Q +L I GGM
Sbjct: 538 KTLDLVSRTADSICDGDLVSRQIRSNSSWSLLPMQAMLSAVIPSYFIS---GGM 588
>gi|308198335|ref|XP_001386998.2| DNA replication factor C [Scheffersomyces stipitis CBS 6054]
gi|149388978|gb|EAZ62975.2| DNA replication factor C [Scheffersomyces stipitis CBS 6054]
Length = 325
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 45/244 (18%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+PR L+++ + +E ++ +KD + ++I+G G+GKT ++ +
Sbjct: 13 WVEKYRPRRLDDVVGNEETIERLKLI-------AKDGNMPH-MIISGLPGIGKTTSIHCL 64
Query: 199 ASH-LGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVE-RIRRYGSTSPSIPG 256
A LG Y+ T LE + D + V RI+++ T +P
Sbjct: 65 AYELLGDDYYQQAT----------------LELNASDDRGIDVVRNRIKQFAQTKIKLP- 107
Query: 257 ESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSF 316
+ I+L + +T G A + LR+ + + +T A C ++ +
Sbjct: 108 PGRHKIIILDEADSMTPG--AQQALRRTMEIYSNTTRFAFA-----CNQSSKI------I 154
Query: 317 EELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAI 376
E LQS + N + + + L ++ E ++E + + + GD+RQAI
Sbjct: 155 EPLQS-----RCAILRYNKLADDQVLTRLLEVSAAENVKFNSEGLQALIFTAEGDMRQAI 209
Query: 377 TSLQ 380
+LQ
Sbjct: 210 NNLQ 213
>gi|268566871|ref|XP_002639835.1| C. briggsae CBR-CDC-6 protein [Caenorhabditis briggsae]
Length = 513
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 55/248 (22%)
Query: 151 LAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWD 210
L + + E +++W E SK ++ + ++GQ G GKTAT ++ +HLG +
Sbjct: 181 LKARENEFESLKSWILE----SKSGKTSLSIYVSGQPGTGKTATTTRVLAHLGESIKSCI 236
Query: 211 T------PTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGESKSSAIL 264
+ P +++E + K L LDE +N R ++ A+
Sbjct: 237 SLDLSGKPNVEVFEEQVKKFKVPLVLV--LDEIDNLANR---------------RNEALY 279
Query: 265 LIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFEELQSILV 324
PVT L +++L G A+S+D T + +L+ L
Sbjct: 280 AAFQWPVT--------LSYKVIIL---------------GIANSIDLTERLLPKLE--LG 314
Query: 325 DAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQ---ASGGDIRQAITSLQF 381
+++ P T I L+ +QE+ + + I+L A+ A GD+R A+ +
Sbjct: 315 KHPLKRLVFEPYTKDDIVEILNDKLKQEEAVVDAKAIELTARKVSAMSGDLRTALHIFKQ 374
Query: 382 SSLKQDPM 389
+ PM
Sbjct: 375 QKSRMMPM 382
>gi|67622295|ref|XP_667804.1| replication factor c subunit 4 [Cryptosporidium hominis TU502]
gi|54658967|gb|EAL37571.1| replication factor c subunit 4 [Cryptosporidium hominis]
Length = 327
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 49/265 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+ Q+W EKY+P+ L+E+ + + ++ + G+ + L+++G G GKT +
Sbjct: 2 STQIWIEKYRPKILDEMVGNEEVLTRLKVLAKH--GNMPN------LLLSGPPGTGKTTS 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPS 253
+ +AS + Y + LE + D + V ++I+ +
Sbjct: 54 IHCLASEMLGSKYG----------------RAVLELNASDDRGIDVVRDKIKSFAREKID 97
Query: 254 IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
+P E + ++L + +T+ +A + LR+ + + ST A C ++ +
Sbjct: 98 LP-EGRHKIVILDEVDSMTD--SAQQALRRLMEVYSESTRFALA-----CNQSTKIIEPI 149
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
QS + + + +T+ I++ L +I + E ID + + GD+R
Sbjct: 150 QSRCAI-----------IRYSKLTDAQIRKRLFEIIKMENIPYVDSGIDTLVFTADGDMR 198
Query: 374 QAITSLQ-----FSSLKQDPMLNLS 393
I +LQ FS + +D +L +S
Sbjct: 199 IVINNLQATYHGFSMVSRDNVLKVS 223
>gi|72383094|ref|YP_292449.1| DNA polymerase III subunit tau [Prochlorococcus marinus str.
NATL2A]
gi|72002944|gb|AAZ58746.1| DNA polymerase III, tau subunit [Prochlorococcus marinus str.
NATL2A]
Length = 565
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 53/287 (18%)
Query: 134 STQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTA 193
+T + KY+P S +EL Q + +++ ++ L D+ + + +G G GKT+
Sbjct: 3 TTYEPLHHKYRPTSFDELVGQ----DPIKSTLKQAL--ISDRIAP-AYIFSGPRGTGKTS 55
Query: 194 TVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFE------NFVERIRRY 247
+ R A L E T TP E CK G+ + LD E VE IR
Sbjct: 56 SARIFAKSLNCLKSEKATTTPCGQCEL---CK-GISSGNALDVIEIDAASNTGVENIREL 111
Query: 248 GSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCL------LLLVRSTHIPTAV--- 298
S P +++ + +ID+ + AF L + L ++ + +T P V
Sbjct: 112 IERSRFAPAKARWK-VYVIDECHML-STAAFNALLKTLEEPPRQVVFILATTDPQRVLPT 169
Query: 299 VLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLST 358
+L+ C + D R++AL+ ++ L I ++E+ ++
Sbjct: 170 ILSRCMRFD--------------------FRRIALH-----DLESHLINIAKKEEIQINE 204
Query: 359 EQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSLSISKPNFPEEK 405
E I L+A+ S G +R A + L SL P+ L++ PEE+
Sbjct: 205 EAISLIAKHSQGGLRDAESLLDQVSLLPPPITQLNIINLIGAIPEEE 251
>gi|340369406|ref|XP_003383239.1| PREDICTED: replication factor C subunit 4-like [Amphimedon
queenslandica]
Length = 363
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 139 WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQI 198
W EKY+P+ ++++ Q +EV + ++ L S F L+ G G GKT+ + I
Sbjct: 39 WVEKYRPKVVDDVVHQ----DEVVSVLKKTLTGSD--FPN--LLFYGPPGTGKTSAILAI 90
Query: 199 ASHL-GARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIPGE 257
A L G LY+ + E + G++ D+ ++F R+ +++ G+
Sbjct: 91 AHELFGRDLYK------SRILELNASDDRGIQVIR--DKVKSFA----RHSASASRPDGK 138
Query: 258 SKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQSFE 317
S ++I D + + A LR+ + ST C + + ++ E
Sbjct: 139 PCPSFKIVILDEADSMTQAAQAALRRTMEKESTSTRF--------CLICNYI---SRIIE 187
Query: 318 ELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIRQAIT 377
L S K P+++ ++ L ICR+E + + ID + + S GD+R+AIT
Sbjct: 188 PLTS-----RCSKFRFKPLSSAILRTRLEYICREENVKCNEKAIDRIIETSDGDMRKAIT 242
Query: 378 SLQ 380
LQ
Sbjct: 243 FLQ 245
>gi|260820974|ref|XP_002605809.1| hypothetical protein BRAFLDRAFT_123856 [Branchiostoma floridae]
gi|229291144|gb|EEN61819.1| hypothetical protein BRAFLDRAFT_123856 [Branchiostoma floridae]
Length = 362
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 49/271 (18%)
Query: 114 TPSRFEGLVNPDHDSASASSSTQQL-WAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDS 172
P + V+ S +SS +L W EKY+P L ++ V + + ++ G+
Sbjct: 18 APKKDSSKVDKAKPGTSGTSSGYELPWVEKYRPAKLCDVVGNEDTVSRLEVFSQQ--GNM 75
Query: 173 KDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTS 232
+ ++I G G+GKT ++ +A L Y+ LE +
Sbjct: 76 PN------IIIAGSPGIGKTTSILCLARTLLGPAYK----------------DAVLELNA 113
Query: 233 KLDEFENFVE-RIRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRS 291
D + V +I+ + ++P + + I+L + +T+G A + LR+ + + ++
Sbjct: 114 SNDRGIDVVRNKIKMFAQQKVTLP-KGRHKIIILDEADSMTDG--AQQALRRTMEIYSKT 170
Query: 292 THIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVAL--NPITNGSIKRTLSKIC 349
T A C +D + E +QS R L + +T+ I L +C
Sbjct: 171 TRFALA-----CNASDKI------IEAIQS-------RCAVLRYSKLTDNQILERLLYVC 212
Query: 350 RQEQYSLSTEQIDLVAQASGGDIRQAITSLQ 380
+E + + ++ V + GD+RQA+ +LQ
Sbjct: 213 EKENVEHTDDGLEAVIFTAQGDMRQALNNLQ 243
>gi|397772266|ref|YP_006539812.1| Replication factor C [Natrinema sp. J7-2]
gi|397681359|gb|AFO55736.1| Replication factor C [Natrinema sp. J7-2]
Length = 360
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 125/289 (43%), Gaps = 51/289 (17%)
Query: 120 GLVNPDHDSASASSSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTN 179
G+ D ++A ++ ++W EKY+P L ++ V ++ + E +D
Sbjct: 30 GMSEADAEAAESTPGKTEVWIEKYRPERLNDIKGHTDIVPRLKNYVE------QDDLPH- 82
Query: 180 VLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFEN 239
L+ G AG GKT + IA +Y+ D WQE LE + +
Sbjct: 83 -LLFAGPAGTGKTTAAKSIARE----VYDDD------WQENF------LELNASDQRGID 125
Query: 240 FV-ERIRRYGSTSPSIPGESKSSAILLID--DLPVTNGRTAFERLRQCLLLLVRSTHIPT 296
V +RI+ + +S S I+ +D D ++ ++A LR+ + +T
Sbjct: 126 VVRDRIKDFARSSFG----GYSHRIIFLDEADALTSDAQSA---LRRTMEQFSNNTRF-- 176
Query: 297 AVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSL 356
+L S + ++Q + +QS +T +I+ + +I E ++
Sbjct: 177 --IL-------SCNYSSQIIDPIQSRCA-----VFRFTELTADAIEAQVREIAATEDIAV 222
Query: 357 STEQIDLVAQASGGDIRQAITSLQFSSLKQDPMLNLSL-SISKPNFPEE 404
+ + +D + A+ GD+R+AI +LQ +++ + + ++ +I+ PEE
Sbjct: 223 TDDGVDALVYAADGDMRKAINALQAAAVMGETVDEETVFAITATARPEE 271
>gi|123412361|ref|XP_001304045.1| ATPase, AAA family protein [Trichomonas vaginalis G3]
gi|121885470|gb|EAX91115.1| ATPase, AAA family protein [Trichomonas vaginalis G3]
Length = 603
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 310 DSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASG 369
D AQS + ++SI A + L P + K + IC+ E+ +ST+ I+ VA+ S
Sbjct: 234 DGYAQSLKNIRSI-----ATFIKLPPPNSTQFKERIRYICKNEEIDISTQAINEVAEISK 288
Query: 370 GDIRQAITSLQFSSLKQ 386
DIR A+ ++ F +Q
Sbjct: 289 YDIRTALNTISFLRARQ 305
>gi|66359084|ref|XP_626720.1| replication factor C like AAA+ ATpase [Cryptosporidium parvum Iowa
II]
gi|46228380|gb|EAK89279.1| replication factor C like AAA+ ATpase [Cryptosporidium parvum Iowa
II]
Length = 339
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 49/265 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+ Q+W EKY+P+ L+E+ + + ++ + G+ + L+++G G GKT +
Sbjct: 14 STQIWIEKYRPKILDEMVGNEEVLTRLKVLAKH--GNMPN------LLLSGPPGTGKTTS 65
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPS 253
+ +AS + Y + LE + D + V ++I+ +
Sbjct: 66 IHCLASEMLGSKYG----------------RAVLELNASDDRGIDVVRDKIKSFAREKID 109
Query: 254 IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
+P E + ++L + +T+ +A + LR+ + + ST A C ++ +
Sbjct: 110 LP-EGRHKIVILDEVDSMTD--SAQQALRRLMEVYSESTRFALA-----CNQSTKIIEPI 161
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
QS + + + +T+ I++ L +I + E ID + + GD+R
Sbjct: 162 QSRCAI-----------IRYSKLTDAQIRKRLFEIIKMENIPYVDSGIDTLVFTADGDMR 210
Query: 374 QAITSLQ-----FSSLKQDPMLNLS 393
I +LQ FS + +D +L +S
Sbjct: 211 IVINNLQATYHGFSMVSRDNVLKVS 235
>gi|50292395|ref|XP_448630.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527942|emb|CAG61593.1| unnamed protein product [Candida glabrata]
Length = 775
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 61/236 (25%)
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTG-LEYTSKLDEFEN 239
L+I G+GK ++ IA+HL +++YE + NC G E L EF
Sbjct: 340 LMILHGEGIGKNTLIKNIANHLNSQIYEVAS-----------NCNRGKKEIKEMLLEF-- 386
Query: 240 FVERIRRYGSTSPSIPGESKSSAILLIDDLPVTNGR------TAFERL----RQCLLLLV 289
ST+ + G I+LIDD+ V A E++ R+ ++L
Sbjct: 387 ---------STTHYVKG--TKDGIILIDDVDVIFREHDKFFWQALEKVLMVSRRPIILTT 435
Query: 290 RSTHIPTAVVLTECGKADSVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKIC 349
R + +L C EE +SI + A++V+ G++++ L+K
Sbjct: 436 RDINFIPTYLLDIC-------------EEEKSIFL---AKRVS-----RGTVQKMLAKYI 474
Query: 350 RQEQYSLSTEQIDLVAQASGGDIRQAITSLQF-----SSLKQDPMLNLSLSISKPN 400
L++ I+ + G D+R + LQF + + NLS+SI N
Sbjct: 475 EVLNQPLNSALIEKAIEIHGADVRGCLLDLQFLDGYKTGCDINTPCNLSVSIQDSN 530
>gi|395767070|ref|ZP_10447607.1| DNA polymerase III, subunit gamma and tau [Bartonella doshiae NCTC
12862]
gi|395414829|gb|EJF81266.1| DNA polymerase III, subunit gamma and tau [Bartonella doshiae NCTC
12862]
Length = 640
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 137 QLWAEKYKPRSLEELAVQRKKVEEVRAWFEE-RLGDSKDKFSTNVLVITGQAGVGKTATV 195
++ A KY+P++ +L Q V + FE R+ + ++TG GVGKT T
Sbjct: 11 RVLARKYRPQNFSDLIGQEAMVRTLTNAFETGRIAQA--------WMLTGIRGVGKTTTA 62
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE------------YTSKLDEFENFVER 243
R +A L + + D PT T+ +C +E + +D+ +E+
Sbjct: 63 RILARALNYKTKDIDKPT-TVLDTIGEHCTEIIEGRHIDVIEMDAASHTGIDDIREIIEQ 121
Query: 244 IRRYGSTSPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTEC 303
I RY S I +ID++ + + + AF L + L H+ TE
Sbjct: 122 I-RYRPVSARY-------KIYIIDEVHMLSTQ-AFNGLLKT--LEEPPPHVKFIFATTEI 170
Query: 304 GKAD-SVDSTAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQID 362
K ++ S Q F+ L I + ++ L KI + E+ + + +
Sbjct: 171 RKVPITILSRCQRFD---------------LRRIESTTLSTHLRKIAQHEKVEVEDQALS 215
Query: 363 LVAQASGGDIRQAIT 377
++A+A+ G +R A++
Sbjct: 216 MIARAAEGSVRDALS 230
>gi|309791294|ref|ZP_07685823.1| ATPase central domain-containing protein [Oscillochloris trichoides
DG-6]
gi|308226665|gb|EFO80364.1| ATPase central domain-containing protein [Oscillochloris trichoides
DG6]
Length = 332
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE--YMHNCKTGLEYTSKLDEFE 238
L++TG+ G+GK+ R +A L LYEW T T+ Q+ Y ++ L
Sbjct: 65 LLVTGKPGIGKSTLARAVAEELNLTLYEWPINTRTVLQDGLYRYDALARLRDAQGRAVMT 124
Query: 239 NFVERIRRYGSTSP----SIPGESKSSAILLIDDL 269
N + + +Y + P +P E S +LLID++
Sbjct: 125 NTAQEVGQYITLGPLGMALLPVERPS--VLLIDEI 157
>gi|323509483|dbj|BAJ77634.1| cgd3_1450 [Cryptosporidium parvum]
Length = 327
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 49/265 (18%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTAT 194
+ Q+W EKY+P+ L+E+ + + ++ + G+ + L+++G G GKT +
Sbjct: 2 STQIWIEKYRPKILDEMVGNEEVLTRLKVLAKH--GNMPN------LLLSGPPGTGKTTS 53
Query: 195 VRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTSPS 253
+ +AS + Y + LE + D + V ++I+ +
Sbjct: 54 IHCLASEMLGSKYG----------------RAVLELNASDDRGIDVVRDKIKSFAREKID 97
Query: 254 IPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTA 313
+P E + ++L + +T+ +A + LR+ + + ST A C ++ +
Sbjct: 98 LP-EGRHKIVILDEVDSMTD--SAQQALRRLMEVYSESTRFALA-----CNQSTKIIEPI 149
Query: 314 QSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDIR 373
QS + + + +T+ I++ L +I + E ID + + GD+R
Sbjct: 150 QSRCAI-----------IRYSKLTDAQIRKRLFEIIKMENIPYVDSGIDTLVFTADGDMR 198
Query: 374 QAITSLQ-----FSSLKQDPMLNLS 393
I +LQ FS + +D +L +S
Sbjct: 199 IVINNLQATYHGFSMVSRDNVLKVS 223
>gi|268325481|emb|CBH39069.1| replication factor C, small subunit [uncultured archaeon]
gi|268325789|emb|CBH39377.1| replication factor C, small subunit [uncultured archaeon]
Length = 322
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 49/252 (19%)
Query: 136 QQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATV 195
+ +W EKY+PR LEE++ Q + ++++ ++R + L+ +G AGVGKTA
Sbjct: 4 EAIWTEKYRPRKLEEVSGQEAIIRNLQSYVKKR--------NLPHLIFSGPAGVGKTAAA 55
Query: 196 RQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSPSIP 255
+A +D + E + + G+E I+ + T P
Sbjct: 56 VAMAREF------YDDTWAENFTELNASDERGIEVVRNT---------IKNFARTMP--I 98
Query: 256 GESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDSTAQ- 314
G++ I L + +T+ A LR+ + + T + C + + Q
Sbjct: 99 GDAAFKIIFLDEADALTDA--AQSALRRTM-----ERYSGTCRFILSCNYSSKIIEPIQS 151
Query: 315 --SFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGDI 372
S +S+ DA A + I E +LS + + + S GD+
Sbjct: 152 RCSVYRFKSLSYDAIASRA--------------KYIADTEGLTLSEDALRAINYVSMGDM 197
Query: 373 RQAITSLQFSSL 384
R+AI +LQ +S+
Sbjct: 198 RRAINALQSASV 209
>gi|347524284|ref|YP_004781854.1| AAA ATPase central domain containing protein [Pyrolobus fumarii 1A]
gi|343461166|gb|AEM39602.1| AAA ATPase central domain protein [Pyrolobus fumarii 1A]
Length = 504
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 49/250 (19%)
Query: 139 WAEKYKPRSLE-------ELAVQRKKVEEVRAWFEERL-GDSKDKFSTNVLVITGQAGVG 190
W KY+P+ ++ + Q + W ++ L G +K ++ G AG G
Sbjct: 12 WVIKYRPKCIDPKPGCIMHVVDQEQAKRLFVPWLKQWLSGKPPEK---KAVLFYGPAGCG 68
Query: 191 KTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGST 250
KT+ V A L E + ++ K D +ER+ R +T
Sbjct: 69 KTSLVEAAAHEYNLELVEMNAS----------------DFRRKED-----IERVARVAAT 107
Query: 251 SPSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVD 310
S+ G K I+L+D++ +G L L L+ + H +V+T + D
Sbjct: 108 QMSLFGRKK---IILLDEVDGISGTADKGGLDAVLHLIEVAKH---PIVMT------AND 155
Query: 311 STAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGG 370
Q + L+ + V + + + LS+IC+ E E ++L+A+ + G
Sbjct: 156 PWDQKLKPLRD-----ASLMVPFYRLQDRYVVEVLSRICKLEGIHCEPEALELLAKRAEG 210
Query: 371 DIRQAITSLQ 380
D+R AI LQ
Sbjct: 211 DLRSAINDLQ 220
>gi|398355505|ref|YP_006400969.1| AAA ATPase [Sinorhizobium fredii USDA 257]
gi|390130831|gb|AFL54212.1| ATPase, AAA family protein [Sinorhizobium fredii USDA 257]
Length = 398
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 181 LVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE--YMHNCKTGLEYTSKLDEFE 238
L++ G+ G GKT RQIA+ LG L EW+ + T Q+ Y ++ + L + D
Sbjct: 148 LLVKGEPGTGKTELARQIAAALGLELIEWNVKSTTKAQQGLYEYDAVSRLRDSQLGDARV 207
Query: 239 NFVERIRRYGSTSPSIPGESKSSAILLIDDL 269
N V R G + E+ A+LLID++
Sbjct: 208 NDVGNYIRKGKLWQAF--EASEKAVLLIDEI 236
>gi|171185161|ref|YP_001794080.1| replication factor C small subunit [Pyrobaculum neutrophilum
V24Sta]
gi|170934373|gb|ACB39634.1| Replication factor C [Pyrobaculum neutrophilum V24Sta]
Length = 319
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 50/252 (19%)
Query: 135 TQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEE--RLGDSKDKFSTNVLVITGQAGVGKT 192
++ W EKY+PRS +E+ +EEV++ E R G+ L+ G G GKT
Sbjct: 2 SELFWFEKYRPRSFDEVV----DLEEVKSRLREFVRSGNMPH------LLFYGPPGTGKT 51
Query: 193 ATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFV-ERIRRYGSTS 251
+A L W+E LE + + N + ER++ + T+
Sbjct: 52 TMALVLARELYGEY----------WRE------NTLELNASDERGINVIRERVKEFARTA 95
Query: 252 PSIPGESKSSAILLIDDLPVTNGRTAFERLRQCLLLLVRSTHIPTAVVLTECGKADSVDS 311
P K+ L+I D A + LR+ + + ++T ++L +
Sbjct: 96 PI-----KAPFKLVILDEADNMTSDAQQALRRIMEIYAQNTRF---ILLA--------NY 139
Query: 312 TAQSFEELQSILVDAGARKVALNPITNGSIKRTLSKICRQEQYSLSTEQIDLVAQASGGD 371
+ E +QS +V V NP+ ++ L I E S + ++ + + + GD
Sbjct: 140 VSGIIEPIQSRVV-----MVRFNPLPKDAVIARLRYIAENEGIKASDDALETIFEFTQGD 194
Query: 372 IRQAITSLQFSS 383
+R+AI +LQ ++
Sbjct: 195 MRKAINALQIAA 206
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,361,026,126
Number of Sequences: 23463169
Number of extensions: 343055993
Number of successful extensions: 1035734
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 1514
Number of HSP's that attempted gapping in prelim test: 1032336
Number of HSP's gapped (non-prelim): 2901
length of query: 544
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 396
effective length of database: 8,886,646,355
effective search space: 3519111956580
effective search space used: 3519111956580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)