BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009075
(544 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/481 (81%), Positives = 437/481 (90%), Gaps = 9/481 (1%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFG 123
MEL +S ++ +VT ++ + +++ALLS RGAESRKAR LDSFEYNAISCRAHSASITDFG
Sbjct: 1 MELLLISSIKPRVTNVISVFVILALLSARGAESRKARVLDSFEYNAISCRAHSASITDFG 60
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
GVGDG TSNTKAF+DAI LSQY++DGG+QL+VPAGKWLTGSF+L SHFTL+LHKDA LL
Sbjct: 61 GVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHFTLFLHKDAVLL 120
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
SQDL EWP++KPLPSYGRGRDAAAGRY+SLIFGTNLTD+IVTG+NGTIDGQGA WWQQF
Sbjct: 121 GSQDLKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTIDGQGAFWWQQF 180
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
KGKLKYTRPYL+E MY+DNIQIS+LTLLNSPSWNVHPVYSSNIL+QGITIIAPVTSPNT
Sbjct: 181 KKGKLKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGITIIAPVTSPNT 240
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGINP DCYI+SGDDCVAVKSGWDEYGIA+GMPTKQLVIRRLTCISPYSATI
Sbjct: 241 DGINP---------DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATI 291
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
ALGSEMSGGIQDVRAEDI AI+TESGVRIKTAVGRGGYVKDIYV+ MTMHTMKWAFWMTG
Sbjct: 292 ALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTG 351
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
NYGSHAD +YDP ALPVI+GINYRD+VADNVSMAARLEGISGDPF ICI+N TIGMAAK
Sbjct: 352 NYGSHADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAAK 411
Query: 484 HKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRINY 543
KK+PWTC DI G+T+GV+P PC+LLPDQGPEK+ ACDFP E++PID V+ +KCTY ++Y
Sbjct: 412 AKKIPWTCTDIEGITTGVSPRPCDLLPDQGPEKLTACDFPPENIPIDSVQFQKCTYSMHY 471
Query: 544 L 544
+
Sbjct: 472 M 472
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/457 (83%), Positives = 426/457 (93%)
Query: 88 LLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYS 147
+S RGAESRKAR LDSFEY+AI+CRAHSAS+TDFGGVGDG TSNTKAFKDAI+ LSQ+S
Sbjct: 14 FISFRGAESRKARILDSFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFS 73
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG+QL+VPAGKWLTGSF+L SHFTLYLHKDA LLASQD+ EWPV+KPLPSYGRGRDAA
Sbjct: 74 SDGGSQLFVPAGKWLTGSFSLTSHFTLYLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAA 133
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQIS 267
AGRY+SLIFGTNLTDVI+TG+NGTIDGQGA WWQ FHKGKLKYTRPYL+E M++D IQIS
Sbjct: 134 AGRYSSLIFGTNLTDVIITGNNGTIDGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQIS 193
Query: 268 SLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 327
+LTLLNSPSWNVHPVYS +ILVQGITIIAP++SPNTDGINPDSCTNT+IEDCYIVSGDDC
Sbjct: 194 NLTLLNSPSWNVHPVYSRDILVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDC 253
Query: 328 VAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTE 387
VAVKSGWDEYGIA+GMPTKQLVIRRLTCISPYSATIALGSEMSGGI+DVRAEDI AI+TE
Sbjct: 254 VAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIEDVRAEDITAIHTE 313
Query: 388 SGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYR 447
SGVRIKTAVGRGGYVKDIYV+ MTMHTMKW FWMTGNYGSHAD +YDP ALP+IQGINYR
Sbjct: 314 SGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADKNYDPNALPLIQGINYR 373
Query: 448 DIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE 507
D+VADNV+MAARLEGI+GDPF ICI+N TIG+A K KKVPWTC +I GMTSGV+P PC+
Sbjct: 374 DMVADNVTMAARLEGIAGDPFKEICISNVTIGLAPKAKKVPWTCTEIEGMTSGVSPRPCD 433
Query: 508 LLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRINYL 544
LLPDQGPEKI +CDFP E++PID+V+ K C++ ++Y+
Sbjct: 434 LLPDQGPEKITSCDFPPENIPIDLVQFKMCSFGMSYM 470
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/478 (81%), Positives = 426/478 (89%), Gaps = 1/478 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRL-DSFEYNAISCRAHSASITDF 122
M+L S +R QV +LV L++V LLS AESRKA+ SFEY AI+CRAHSAS+ DF
Sbjct: 1 MKLLWKSHVRVQVIRLVCALLLVTLLSSEVAESRKAKTARTSFEYKAINCRAHSASLIDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDG TSNTKAF+ AI+ LSQY+S GGAQLYVPAGKWLTGSF+LISHFTLYL+KDAFL
Sbjct: 61 GGVGDGNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAFL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD+ EWPVI+PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA WWQ+
Sbjct: 121 LASQDIREWPVIEPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQK 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
F K KLKYTRPYL+E M++D IQIS+LTLLNSPSWNVHPVYSSNI+++G+TIIAPV SPN
Sbjct: 181 FQKKKLKYTRPYLIELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPN 240
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI +G PTKQLVIRRLTCISP SA
Sbjct: 241 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAA 300
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGIQDVRAEDI AI+TESGVRIKTAVGRGGYVKDIYV+ MTMHTMKW FWMT
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMT 360
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
GNYGSHAD+HYDP ALP I GINYRD+VADNV++AARLEGIS DPFTGICIAN TI MAA
Sbjct: 361 GNYGSHADSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAA 420
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
K KK PW C DI G+TSGVTP PC LPDQGPEKI+ACDFP E+LPIDM+E++KC Y+
Sbjct: 421 KAKKQPWACTDIEGITSGVTPKPCNSLPDQGPEKIKACDFPQENLPIDMLELQKCVYK 478
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/481 (80%), Positives = 427/481 (88%), Gaps = 1/481 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRL-DSFEYNAISCRAHSASITDF 122
MEL +R QV +LV +++V LLS AESRK + + SF+Y AI+CR HSAS+TDF
Sbjct: 1 MELLWKDHMRVQVIRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASLTDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDGKTSNTKAF+ AI+ LSQY+S GGAQLYVPAGKWLTGSF+LISHFTLYL+KDA L
Sbjct: 61 GGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAVL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD++EWP I+PLPSYGRGRDA AGRYTSLIFGTNLTDVIVTG NGTIDGQGA WWQ+
Sbjct: 121 LASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQK 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
FHK KLKYTRPYL+E M++D IQIS+LTLLNSPSWN+HPVYSSNI+++G+TIIAPV SPN
Sbjct: 181 FHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPN 240
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI +G PTKQLVIRRLTCISP SA
Sbjct: 241 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAA 300
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGIQDVRAEDI AI+TESGVRIKTAVGRGGYVKDIYV+ MTMHTMKW FWMT
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMT 360
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
GNYGSHAD+HYDPKALP I GINYRD+VADNV+MAARLEGIS DPFTGICIAN TIGMAA
Sbjct: 361 GNYGSHADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIGMAA 420
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
K KK PWTC DI G+TSGVTP PC LPDQGPEKI+ACDFP +LPIDM+E+KKC Y +
Sbjct: 421 KAKKQPWTCTDIEGITSGVTPKPCNSLPDQGPEKIKACDFPQGNLPIDMLELKKCAYIMK 480
Query: 543 Y 543
+
Sbjct: 481 H 481
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/450 (83%), Positives = 413/450 (91%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
E RK R L++ EY+AISCRAHSAS+ DFGGVGDG+T NTKAF+DA+++LS+Y S+GGAQ
Sbjct: 28 GECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQ 87
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
LYVPAGKWLTGSF+L SHFTL+LH+DA LLASQD+++WPVIKPLPSYGRGRDAAAGRYTS
Sbjct: 88 LYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTS 147
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLN 273
LIFGTNLTDVI+TGDNGTIDGQG LWWQ+FH GKLKYTRPYL+E MY+ +IQIS+LTLLN
Sbjct: 148 LIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLN 207
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SPSWNVHPVYS NIL+QGITI+APV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG
Sbjct: 208 SPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 267
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
WDEYGIAYGMPTKQLVIRRLTCISPYSA IALGSEMSGGIQDVRAEDI AIN+ESG+RIK
Sbjct: 268 WDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIK 327
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADN 453
T +GRGGYVKDIYVRGMTM TMKWAFWMTGNYGSHADNHYDPKA PVIQGINYRD+VA+N
Sbjct: 328 TGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAEN 387
Query: 454 VSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
VSMAARLEGI DPFTGICI+N TI +AAK KKVPWTC D+ G++SGVTP PC LPDQG
Sbjct: 388 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 447
Query: 514 PEKIRACDFPTESLPIDMVEMKKCTYRINY 543
PEK C+FP ESLPID VE++KC+Y INY
Sbjct: 448 PEKTSLCNFPAESLPIDTVELQKCSYGINY 477
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/450 (83%), Positives = 413/450 (91%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
E RK R L++ EY+AISCRAHSAS+ DFGGVGDG+T NTKAF+DA+++LS+Y S+GGAQ
Sbjct: 40 GECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQ 99
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
LYVPAGKWLTGSF+L SHFTL+LH+DA LLASQD+++WPVIKPLPSYGRGRDAAAGRYTS
Sbjct: 100 LYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTS 159
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLN 273
LIFGTNLTDVI+TGDNGTIDGQG LWWQ+FH GKLKYTRPYL+E MY+ +IQIS+LTLLN
Sbjct: 160 LIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLN 219
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SPSWNVHPVYS NIL+QGITI+APV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG
Sbjct: 220 SPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 279
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
WDEYGIAYGMPTKQLVIRRLTCISPYSA IALGSEMSGGIQDVRAEDI AIN+ESG+RIK
Sbjct: 280 WDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIK 339
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADN 453
T +GRGGYVKDIYVRGMTM TMKWAFWMTGNYGSHADNHYDPKA PVIQGINYRD+VA+N
Sbjct: 340 TGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAEN 399
Query: 454 VSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
VSMAARLEGI DPFTGICI+N TI +AAK KKVPWTC D+ G++SGVTP PC LPDQG
Sbjct: 400 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 459
Query: 514 PEKIRACDFPTESLPIDMVEMKKCTYRINY 543
PEK C+FP ESLPID VE++KC+Y INY
Sbjct: 460 PEKTSLCNFPAESLPIDTVELQKCSYGINY 489
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/482 (78%), Positives = 423/482 (87%), Gaps = 1/482 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDF 122
M L + R V + +++VALLS ESRKA+ + S EYNAI+CRAHSA++TDF
Sbjct: 1 MGLLWKTHTRIHVIRTFFAILLVALLSSERVESRKAKVVTTSLEYNAINCRAHSAALTDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDGKTSNTKAF+ AI+ LSQY+S+GG+QLYVPAGKWLTGSF+L SHFTLYL KDA L
Sbjct: 61 GGVGDGKTSNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD+ EWPV++PLPSYGRGRDA AGR+TSLIFGTNLTDVIVTG+NGTIDGQG WWQQ
Sbjct: 121 LASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQ 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
FH+ KLKYTRPYL+E M++DNIQIS+LTLLNSPSWNVHPVYSSNI+VQGITI APVTSPN
Sbjct: 181 FHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPN 240
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTN RIEDCYIVSGDDCVAVKSGWDEYGI +G PTKQLVIRRLTCISPYSAT
Sbjct: 241 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSAT 300
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGIQDVRAEDI AI TESGVRIKTAVGRGGYVKDIYV+ MT+HTMKWAF MT
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMT 360
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
G+Y SHAD HYDP ALP I+ INYRD+VA+NV++AAR +GIS DPFTGICIAN T+ MAA
Sbjct: 361 GDYNSHADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAA 420
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
K KK PWTC DI GMTSGVTPPPC LLPDQGPEKI ACDFP ++LPID+VE+KKCT +
Sbjct: 421 KAKKQPWTCTDIEGMTSGVTPPPCGLLPDQGPEKITACDFPADNLPIDIVELKKCTTTMT 480
Query: 543 YL 544
Y+
Sbjct: 481 YV 482
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/452 (81%), Positives = 411/452 (90%)
Query: 93 GAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA 152
GAESRK D FEY+AI+CRAHSAS+TDFGGVGDG TSNTKAF+ AI+ LSQ++SDGG+
Sbjct: 29 GAESRKHWVFDYFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGS 88
Query: 153 QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT 212
QL+VP G+WLTGSFNL SHFTLYLHKDA LLASQD +EWPVI PLPSYGRGRD GRY
Sbjct: 89 QLFVPPGRWLTGSFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYI 148
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLL 272
SLIFGTNLTDV++TG+NGTIDGQGALWW +FHKG+LKYTRPYL+E M++DN+QISSLTL+
Sbjct: 149 SLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLV 208
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSPSWNVHPVYSSN+++QG+TI APVTSPNTDGINPDSCTNTRIEDCYIVSGDDC+AVKS
Sbjct: 209 NSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKS 268
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
GWDEYGIAYGMPTKQLVIRRLTCISP+SATIALGSEMSGGI+DVRAEDI AI+TESGVRI
Sbjct: 269 GWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRI 328
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVAD 452
KTAVGRGGYVKDIYVR M M TMKWAFWMTGNYGSHADN+YDP ALP IQGINYRD+VA+
Sbjct: 329 KTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAE 388
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQ 512
NV+MA RLEGISGDPFTGICI+N TIG+A K KK PWTC DI G+TSGV P PC+LLPDQ
Sbjct: 389 NVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQ 448
Query: 513 GPEKIRACDFPTESLPIDMVEMKKCTYRINYL 544
GPEKI AC+FPT+SLPID VE++ C+Y YL
Sbjct: 449 GPEKIVACNFPTDSLPIDTVEVQTCSYWGKYL 480
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/482 (78%), Positives = 425/482 (88%), Gaps = 1/482 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDF 122
ME + +R V + L++VALLS G ESRKA+ + S EYNAI+CRAHSAS+TDF
Sbjct: 1 MEFLWKTLMRIHVIRTFFALLLVALLSSEGVESRKAKVVTTSLEYNAINCRAHSASLTDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDGK SNTKAF+ AI+ LSQY+S+GG+QLYVPAGKWLTGSF+L SHFTLYL KDA L
Sbjct: 61 GGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD+ EWPV++PLPSYGRGRDA AGR+TSLIFGTNLTDVIVTG+NGTIDGQG WWQQ
Sbjct: 121 LASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQ 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
FH+ KLKYTRPYL+E M++DNIQIS+LTLLNSPSWNVHPVYSSNI+VQGITI APVTSPN
Sbjct: 181 FHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIFAPVTSPN 240
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTN RIEDCYIVSGDDCVAVKSGWDEYGI +G PTKQL+IRRLTCISPYSAT
Sbjct: 241 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPYSAT 300
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGIQDVRAEDI AI TESGVRIKTAVGRGGYVKDIYV+ MT+HTMKWAF MT
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMT 360
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
G+Y SHAD+HYDP ALP I+ INYRD+VA+NV++AAR +GIS DPFTGICIAN T+ MAA
Sbjct: 361 GDYNSHADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAA 420
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
K KK PWTC DI GMTSGVTPPPC LLPDQGPEKI ACDFP +SLPIDM+E+KKCT +
Sbjct: 421 KAKKQPWTCTDIEGMTSGVTPPPCGLLPDQGPEKITACDFPADSLPIDMLELKKCTTTMT 480
Query: 543 YL 544
++
Sbjct: 481 FV 482
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/476 (78%), Positives = 418/476 (87%), Gaps = 3/476 (0%)
Query: 70 SRLRSQVTKLVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDFGGVGDG 128
+ +R QV +LV L++ L+S E RKA+ +D SFEYNA++CRAHSAS+TDFGGVGDG
Sbjct: 23 AHMRVQVIRLVCALLLATLVSSEATE-RKAKIVDTSFEYNALNCRAHSASLTDFGGVGDG 81
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
TSNTKAF+ AI+ LSQY+S GGAQLYVPAGKWLTGSF++ SHFTLYL+KDA LLASQD+
Sbjct: 82 NTSNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHFTLYLNKDAVLLASQDM 141
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL 248
NEWPVIKPLPSYGRGRDA AGRYTS IFGTNLTDVIVTGDNGTIDGQGA WWQQF+ +L
Sbjct: 142 NEWPVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTIDGQGAFWWQQFYNKRL 201
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
YTRPYL+E M++D IQIS+LT LNSPSWNVHPVYSSNI+++G+TIIAPV SPNTDGINP
Sbjct: 202 NYTRPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINP 261
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
DSCTNTRIEDCYIVSGDDCVAVKSGWDE+GI +G PTKQLVIRRLTCISP SA IALGSE
Sbjct: 262 DSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGSE 321
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
MSGGIQDVRAEDI AI+TESGVRIKT++GRGGYVKDIYVR MTMHTMKWAFWMTGNYGS+
Sbjct: 322 MSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGSY 381
Query: 429 ADN-HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKV 487
A+N HYDPKALP I+GINYRD+VADNV+MAA LEGIS PFTGICIAN TI MA K +
Sbjct: 382 ANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADKANEK 441
Query: 488 PWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRINY 543
PWTC DI G+TSGVTP PC L D+GPEKI+ CDFP E LPID++E+KKCTY I +
Sbjct: 442 PWTCTDIEGITSGVTPKPCNSLLDKGPEKIKTCDFPPEILPIDLLELKKCTYNIKH 497
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/473 (78%), Positives = 420/473 (88%), Gaps = 9/473 (1%)
Query: 78 KLVPLLIVVALLSQRGAESR--------KARRLDSFEYNAISCRAHSASITDFGGVGDGK 129
K V +++VVAL+ RG +SR ++ +SFEY+A++CRAHSAS+T+FGGVGDGK
Sbjct: 2 KSVFIVVVVALI-LRGGDSRGVTKAKPKAPKKFESFEYSAMNCRAHSASLTEFGGVGDGK 60
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
TSNTKAF+ AI++LSQY++DGGAQL+VPAGKWLTGSF+L SHFTLYLHKD+ LLASQDLN
Sbjct: 61 TSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLTSHFTLYLHKDSVLLASQDLN 120
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLK 249
EWPV+K LPSYGRGRDAAAGRY+SLIFGTNLTDVIVTG+NGTIDGQG WWQQFHK KLK
Sbjct: 121 EWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHKKKLK 180
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
YTRPYL+E M++ +IQIS+LTLLNSPSWNVHPVYSSNI+VQGITIIAP++SPNTDGINPD
Sbjct: 181 YTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIVQGITIIAPISSPNTDGINPD 240
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
SCTNT+IEDCYIVSGDDCVAVKSGWDEYGI++GMPTKQLVIRRLTCISPYSATIALGSEM
Sbjct: 241 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGSEM 300
Query: 370 SGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
SGGIQDVRAEDI AINTES VRIKTAVGRG YVKDIYVR MT+HTMKWAFWMTGNYGSHA
Sbjct: 301 SGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGSHA 360
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
D +YD A P I GINYRD+VA+NV+MAARLEGI+ PFTGIC++N TIG+A K KK PW
Sbjct: 361 DGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSNVTIGLAKKAKKQPW 420
Query: 490 TCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
TC DI G+TSGVTP PC LLPDQG +K CDFPT+ +PID VE+KKCTY N
Sbjct: 421 TCTDIQGITSGVTPTPCGLLPDQGTDKPGGCDFPTDDIPIDTVEIKKCTYTSN 473
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/479 (78%), Positives = 425/479 (88%), Gaps = 1/479 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDF 122
MEL S ++ KLV L++V L+S + E RK + + SFEY+A++CRAHS S+ DF
Sbjct: 1 MELLWKSHMKIHAMKLVYALLLVTLMSSKVTECRKGKIISTSFEYSALNCRAHSVSLKDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDGKTSNTKAFK AI+ LSQ +S+GG+QLYVPAGKWLTGSF+LISHFTLYLHKDA L
Sbjct: 61 GGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLYLHKDAVL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD+NEWPVIKPLPSYGRGRDAAAGR+TSLIFGTNLTDVIVTGDNGTIDGQG+ WWQQ
Sbjct: 121 LASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQ 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
FH KLKYTRPYL+E M++DNIQIS+LTLL+SPSWN+HPVYSSNI+++GITIIAP+ SPN
Sbjct: 181 FHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPN 240
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTNT+IEDCYIVSGDDCVAVKSGWDEYGI +G PTKQLVIRRLTCISPYSAT
Sbjct: 241 TDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSAT 300
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGIQDVRAEDI A++TESG+RIKTAVGRGGYVKDIYV+ MTMHTMKWAFW+T
Sbjct: 301 IALGSEMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWIT 360
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
GNYGSHAD +Y+ ALP I+ I+YRD+VADNVSMA LEGIS DPFTGICI+N TI MAA
Sbjct: 361 GNYGSHADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAA 420
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRI 541
K KK PWTC DI G+TSGVTP PC+LLP+QG E IR CDFP++ LPIDM+E+K+CTY I
Sbjct: 421 KAKKQPWTCNDIEGITSGVTPKPCDLLPEQGKENIRDCDFPSDYLPIDMLELKQCTYSI 479
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/448 (80%), Positives = 406/448 (90%)
Query: 95 ESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQL 154
ESR+A LD FEY A+SCRA+SAS+ +FGGVGDG T NTKAF+ AI LSQY++ GG+QL
Sbjct: 46 ESRRAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQL 105
Query: 155 YVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSL 214
YVP GKWLTGSFNL SHFTL+LHKDA +LASQD N+WPVI PLPSYGRGRD GR++SL
Sbjct: 106 YVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSL 165
Query: 215 IFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNS 274
IFGTNLTDVI+TGDNGTIDGQG LWWQ+FHKG+LKYTRPYL+E MY+DN+QIS+LTL+NS
Sbjct: 166 IFGTNLTDVIITGDNGTIDGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNS 225
Query: 275 PSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 334
PSWNVHP+YSSN++VQGITI+APVTSPNTDGINPDSCT+TRIEDCYIVSGDDCVAVKSGW
Sbjct: 226 PSWNVHPIYSSNVVVQGITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGW 285
Query: 335 DEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKT 394
DEYGIAYGMPTKQLVIRRLTCISP+SA IALGSEMSGGIQD+RAEDI AINTESGVRIKT
Sbjct: 286 DEYGIAYGMPTKQLVIRRLTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKT 345
Query: 395 AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV 454
AVGRGGYVKDI+VR MTM TMKWAFWMTGNYGSHAD++YDP ALPVIQ INYRD+VA+NV
Sbjct: 346 AVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENV 405
Query: 455 SMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGP 514
+MAARLEGISGDPFTGICI+N TI +A K KKVPWTC DI G++S VTP PC+LLPDQG
Sbjct: 406 TMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQGE 465
Query: 515 EKIRACDFPTESLPIDMVEMKKCTYRIN 542
EKI AC FP ESLPI+ ++++ CTYR N
Sbjct: 466 EKIGACTFPEESLPIEDIKVQTCTYRRN 493
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/448 (80%), Positives = 405/448 (90%)
Query: 95 ESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQL 154
ESR+A LD FEY A+SCRA+SAS+ +FGGVGDG T NTKAF+ AI+ LSQY+S GG+QL
Sbjct: 21 ESRRAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQL 80
Query: 155 YVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSL 214
YVP GKWLTGSFNL SHFTL+LHKDA +LASQD N+WPVI PLPSYGRGRD GR++SL
Sbjct: 81 YVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSL 140
Query: 215 IFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNS 274
IFGTNLTDVI+TGDNGTIDGQG LWWQ+F KG+LKYTRPYL+E MY+DN+QIS+LTL+NS
Sbjct: 141 IFGTNLTDVIITGDNGTIDGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLVNS 200
Query: 275 PSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 334
PSWNVHP+YSSN++VQGITI+APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW
Sbjct: 201 PSWNVHPIYSSNLVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 260
Query: 335 DEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKT 394
DEYGIAYGMPTKQLVIRRLTCISP+SA IALGSEMSGGIQDVRAEDI AIN+ESGVRIKT
Sbjct: 261 DEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKT 320
Query: 395 AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV 454
AVGRGGYVKDI+VR MTM TMKWAFWMTGNYGSHAD++YDP ALPVIQ INYRD+VA+NV
Sbjct: 321 AVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENV 380
Query: 455 SMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGP 514
+MAARLEGISGDPFTGICI+N TI +A K KKVPWTC DI G++S VTP PC LLPDQG
Sbjct: 381 TMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCGLLPDQGE 440
Query: 515 EKIRACDFPTESLPIDMVEMKKCTYRIN 542
EKI AC FP ESLPI+ ++++ CTYR N
Sbjct: 441 EKIGACTFPEESLPIEDIKVQTCTYRRN 468
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/482 (76%), Positives = 418/482 (86%), Gaps = 1/482 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDF 122
M+L + +R Q+ ++ + VV L+ ESRKA+ + SF YN I+CRAHSAS+TDF
Sbjct: 1 MKLLWKTHIRVQMIQIFLAIFVVTLVYPERVESRKAKIVTTSFVYNGINCRAHSASLTDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDG TSNTKAF+ AI+ LSQY S GG+QLYVPAGKWLTGSF+L SHFTLYL +DA L
Sbjct: 61 GGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD+ EWPV++PLPSYGRGRDA AGR+ SLIFGTNLTDVIVTG NGTIDGQGA WWQQ
Sbjct: 121 LASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQ 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
FH+ KLKYTRPYL+E M++D+IQIS+LTLLNSPSWNVHPVYSSNI++QGITIIAP++SPN
Sbjct: 181 FHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPN 240
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTNT+IEDCYIVSGDDCVAVKSGWDEYGI +G PTKQLVIRRLTCISP+SAT
Sbjct: 241 TDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSAT 300
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGIQDVRAEDI AI TESGVRIKTAVGRGGYVKDIYV+ TMHTMKWAF MT
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMT 360
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
G+Y SHAD H+DP ALP I INYRD+VA+NV++AAR +GIS DPF GICIAN T+GMA
Sbjct: 361 GDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAV 420
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
K KK WTC DI GMTSGVTPPPC+LLPDQGPEKI ACDFP ESLPID +E+KKC+Y +
Sbjct: 421 KAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSYSMK 480
Query: 543 YL 544
Y+
Sbjct: 481 YV 482
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/490 (73%), Positives = 415/490 (84%), Gaps = 10/490 (2%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRL----------DSFEYNAISCR 113
ME + +++QV K+V L ++VA E RK + + EY AISCR
Sbjct: 3 MEKLYKNPIKAQVMKMVILGVIVAAALMDEVEGRKGKVKKGKKAKILEGNGIEYGAISCR 62
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
AH+ASIT+FGGVGDG TSNTKAF+ A+ QLSQY+ DGGAQLYVPAGKWLTGSFNL SHFT
Sbjct: 63 AHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHFT 122
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L+LH+DA LLASQD NEWPV++PLPSYG GRD + GRY SLIFGTNLTDV++TG+NGTID
Sbjct: 123 LFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTID 182
Query: 234 GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
GQG WWQ FH+GKLKYTRPYL+E MY+ +IQISSLTLLNSP+WNVHPVYSSNIL+QGIT
Sbjct: 183 GQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGIT 242
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
IIAPV SPNTDGINPDSCTN RIEDCYIVSGDDCVAVKSGWDEYGI++G+PTKQLV+RRL
Sbjct: 243 IIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRL 302
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH 413
TCISP SA IALGSEMSGGI+DVRAEDI AI++ESGVRIKT +GRGGYVKDIYVR MTMH
Sbjct: 303 TCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMH 362
Query: 414 TMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICI 473
TMKWAFWMTG+YGSHAD +YDP ALPVIQGINY+D+V +N +MAARLEGISGD FT ICI
Sbjct: 363 TMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICI 422
Query: 474 ANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVE 533
+N TIG+A K KK PWTC DI G+TS VTPPPC+LLPDQG EKI C FP ++LPID V+
Sbjct: 423 SNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKFPEDNLPIDSVQ 482
Query: 534 MKKCTYRINY 543
+KKC+Y+ ++
Sbjct: 483 LKKCSYQFSH 492
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/482 (76%), Positives = 417/482 (86%), Gaps = 1/482 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDF 122
M+L + +R Q+ ++ + VV L+ ESRKA+ + SF YN I+CRAHSAS+TDF
Sbjct: 1 MKLLWKTHIRVQMIQIFLAIFVVTLVYPERVESRKAKIVTTSFVYNGINCRAHSASLTDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDG TSNTKAF+ AI+ LSQY S GG+QLYVPAGKWLTGSF+L SHFTLYL +DA L
Sbjct: 61 GGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD+ EWPV++PLPSYGRGRDA AGR+ SLIFGTNLTDVIVTG NGTIDGQGA WWQQ
Sbjct: 121 LASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQ 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
FH+ +LKYTRPYL+E M++D+IQIS+LTLLNSPSWNVHPVYSSNI++QGITIIAP++SPN
Sbjct: 181 FHRKELKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPN 240
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTNT+IEDCYIVSGDDCVAVKSGWDEYGI +G PTKQLVIRRLTCISP+SAT
Sbjct: 241 TDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSAT 300
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGIQDVRAEDI AI TESGVRIKTAVGRGGYVKDIYV+ TMHTMKWAF MT
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMT 360
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
G+Y SHAD H+DP ALP I INYRD+VA+NV++AAR +GI DPF GICIAN T+GMA
Sbjct: 361 GDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTLGMAV 420
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
K KK WTC DI GMTSGVTPPPC+LLPDQGPEKI ACDFP ESLPID +E+KKC+Y +
Sbjct: 421 KAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSYSMK 480
Query: 543 YL 544
Y+
Sbjct: 481 YV 482
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/490 (73%), Positives = 415/490 (84%), Gaps = 10/490 (2%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRL----------DSFEYNAISCR 113
ME + +++QV K+V L +++A E RK + + EY AISCR
Sbjct: 3 MEKLYKNPIKAQVMKMVILGVIMAAALMGEVEGRKGKVKKGKKAKILEGNGIEYGAISCR 62
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
AH+ASIT+FGGVGDG TSNTKAF+ A+ QLSQY+ DGGAQLYVPAGKWLTGSFNL SHFT
Sbjct: 63 AHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHFT 122
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L+LH+DA LLASQD NEWPV++PLPSYG GRD + GRY SLIFGTNLTDV++TG+NGTID
Sbjct: 123 LFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTID 182
Query: 234 GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
GQG WWQ FH+GKLKYTRPYL+E MY+ +IQISSLTLLNSP+WNVHPVYSSNIL+QGIT
Sbjct: 183 GQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGIT 242
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
IIAPV SPNTDGINPDSCTN RIEDCYIVSGDDCVAVKSGWDEYGI++G+PTKQLV+RRL
Sbjct: 243 IIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRL 302
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH 413
TCISP SA IALGSEMSGGI+DVRAEDI AI++ESGVRIKT +GRGGYVKDIYVR MTMH
Sbjct: 303 TCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMH 362
Query: 414 TMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICI 473
TMKWAFWMTG+YGSHAD +YDP ALPVIQGINY+D+V +N +MAARLEGISGD FT ICI
Sbjct: 363 TMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICI 422
Query: 474 ANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVE 533
+N TIG+A K KK PWTC DI G+TS VTPPPC+LLPDQG EKI C FP ++LPID V+
Sbjct: 423 SNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKFPEDNLPIDSVQ 482
Query: 534 MKKCTYRINY 543
+KKC+Y+ ++
Sbjct: 483 LKKCSYQFSH 492
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/481 (74%), Positives = 410/481 (85%), Gaps = 1/481 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFG 123
MELS + S V + ++ ++ L G +SRK +L FEY AISCRAH AS+ DFG
Sbjct: 1 MELSTSPK-TSLVMDTILVVGLLLCLCTNGVDSRKRPKLACFEYAAISCRAHEASLEDFG 59
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
GVGDG+TSNTKAF+ AI+ LSQ+S DGG+QLYVP GKWLTGSFNL SHFTL+L KDA LL
Sbjct: 60 GVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTGSFNLTSHFTLFLDKDAVLL 119
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
ASQD +EWPVI+PLPSYGRGRD GRY+SLIFGTNLTDV++TG NGTIDGQG LWW++F
Sbjct: 120 ASQDESEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGANGTIDGQGDLWWKKF 179
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
H G++ YTRPYL+E MY++NIQIS+LTL+NSPSWN+HP YSSN++VQGITI+APV SPNT
Sbjct: 180 HNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTYSSNVVVQGITILAPVNSPNT 239
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI++GMPTKQLVIRRLTCISP SA I
Sbjct: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAAI 299
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
ALGSEMSGGIQDVRAEDI INTESGVRIKT+VGRGGYVKDIYVR MTMHTMKW FWMTG
Sbjct: 300 ALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTG 359
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
NYGSH DN+YDP A+PVI+ INYRDIVA+NV+MAARLEGI+GDPFTGICI+N TIG+A K
Sbjct: 360 NYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 419
Query: 484 HKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRINY 543
KK+ W C DI G++SGVTP PC LLP+Q EKI C+FP +SLPI+ +E+K C+ Y
Sbjct: 420 PKKLQWNCTDIAGISSGVTPKPCSLLPEQEKEKIADCNFPEDSLPIENIEVKMCSSSRKY 479
Query: 544 L 544
L
Sbjct: 480 L 480
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/464 (74%), Positives = 403/464 (86%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKD 138
L+ + ++V L S ES + L++FEY A++CRA+SAS+TDFGGVGDG T NT+AF+
Sbjct: 5 LLLVFMMVVLPSLHVVESVRTPVLENFEYCAVNCRAYSASVTDFGGVGDGTTLNTQAFRK 64
Query: 139 AINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
AI LSQYSS+GG+QLYVP G+WLTGS NL SHFTL++HKDA +L SQD NEWPVI PLP
Sbjct: 65 AIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHFTLFIHKDAVILGSQDENEWPVIDPLP 124
Query: 199 SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEF 258
SYGRGRD GR++SLIFGT+LTDVI+TGDNGT+DGQG LWW++FH +L+YTRPYL+E
Sbjct: 125 SYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLIEI 184
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
MY+DN+QIS+LTL+NSPSWN+HPVY SN++VQGITI+APVTSPNTDGINPDSCTNTRIED
Sbjct: 185 MYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRIED 244
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
CYIVSGDDCVAVKSGWDEYGI+YGMPTK LVIRRLTCISP SA IALGSEMSGGI+DVRA
Sbjct: 245 CYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDVRA 304
Query: 379 EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
EDI AIN+ESGVRIKTAVGRGGYV+DIYVR MTM TMKW FWMTG+YGSHADN+YDP A+
Sbjct: 305 EDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPNAI 364
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PVI+ INYRD+VA+NV+MAARLEGISG PFTGICI+N TI +A K KKVPWTC D+ G++
Sbjct: 365 PVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSGIS 424
Query: 499 SGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
SGVTP PCELLP Q EK AC FP ++L I+ V+++ CTYR N
Sbjct: 425 SGVTPEPCELLPGQAEEKFGACSFPEDNLAIEDVKVQTCTYRRN 468
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/476 (73%), Positives = 409/476 (85%), Gaps = 1/476 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFG 123
MEL R +R RS+V + LL V+ L G ESRK+ + D FEY A+SCRAHSAS++DFG
Sbjct: 1 MELWRSAR-RSKVIDVRGLLGVLVLFYTVGVESRKSVKWDYFEYAALSCRAHSASVSDFG 59
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
GVGDG T+NTKAF+ AI+ LSQ+SS+GG+ LYVP G+WLTGSFNL S+FTLYL KDA LL
Sbjct: 60 GVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYFTLYLDKDAVLL 119
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
ASQD +E+P+I+PLPSYGRGRDA RY+SLIFG NLTDVI+TG NGTIDGQG LWW +F
Sbjct: 120 ASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKF 179
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
G+L YTRPYL+E M++ NIQIS+LTL+NSPSWNVHPVY SN++VQG+TI+APV SPNT
Sbjct: 180 RAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNT 239
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI++GMPTKQLVIRRLTCISP SA I
Sbjct: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVI 299
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
ALGSEMSGGI+DVRAEDI AI++ESGVRIKTAVGRGGYVKDIYVRGMT+ TMKW FWMTG
Sbjct: 300 ALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTG 359
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
NYGSH DN+YDP A+PVIQ INYRD+VA+NV+MAA+LEGI+GDPFTGICI+N TIG+A
Sbjct: 360 NYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQN 419
Query: 484 HKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTY 539
KK+ W C D+ G+TS V P PC LLPDQGP KI C+FP +SLP++ +E++ C++
Sbjct: 420 SKKLQWNCTDVAGITSEVNPKPCALLPDQGPGKIGGCNFPEDSLPVENMEVQTCSF 475
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/464 (74%), Positives = 403/464 (86%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKD 138
L+ + ++V L S ES + L++FEY A++CRA+SAS+TDFGGVGDG T NT+AF+
Sbjct: 5 LLLVFMMVVLPSLHVVESVRTPVLENFEYCAVNCRAYSASVTDFGGVGDGTTLNTQAFRK 64
Query: 139 AINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
AI LSQYSS+GG+QLYVP G+WLTGSFNL SHFTL++HKDA +L SQD NEWPVI PLP
Sbjct: 65 AIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHFTLFIHKDAVILGSQDENEWPVIDPLP 124
Query: 199 SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEF 258
SYGRGRD GR++SLIFGT+LTDVI+TGDNGT+DGQG LWW++FH +L+YTRPYL+E
Sbjct: 125 SYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLIEI 184
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
MY+DN+QIS+LTL+NSPSWN+HPVY SN++VQGITI+APVTSPNTDGINPDSCTNTRIED
Sbjct: 185 MYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRIED 244
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
CYIVSGDDCVAVKSGWDEYGI+YGMPTK LVIRRLTCISP SA IALGSEMSGGI+DVRA
Sbjct: 245 CYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDVRA 304
Query: 379 EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
EDI AIN+ESGVRIKTAVGRGGYV+DIYVR MTM TMKW FWMTG+YGSHADN+YDP A+
Sbjct: 305 EDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPNAI 364
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PVI+ INYRD+VA+NV+MAARL GISG PFTGICI+N TI +A K KKVPWTC D+ G++
Sbjct: 365 PVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSGIS 424
Query: 499 SGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
SGVTP PCELLP Q EK AC FP ++L I+ V+++ CTYR N
Sbjct: 425 SGVTPEPCELLPGQAEEKFGACSFPEDNLAIEDVKVQTCTYRRN 468
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/480 (71%), Positives = 407/480 (84%), Gaps = 10/480 (2%)
Query: 69 MSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDG 128
M + + + ++ L ++ + R R ++ ++FEY AI CR+HSASIT++GGVGDG
Sbjct: 1 MKNILACIVTIITLSNLITISQGR----RVSQSFETFEYTAIICRSHSASITEYGGVGDG 56
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
KT NTKAF+ A++ LSQYSS+GGAQL+VPAGKWLTGSFNL SHFTL+LHKDA LLA+QDL
Sbjct: 57 KTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDL 116
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL 248
NE+P++K LPSYGRGRDAA GR+ SLIFGTNL+DVI+TG+NGTIDGQG+ WWQ+FH GKL
Sbjct: 117 NEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKL 176
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
KYTRPYL+E M++D IQIS+LT L+SPSWN+HPVYSSNI+V+G+TIIAPV SPNTDGINP
Sbjct: 177 KYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINP 236
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
DSCTNTRIEDCYI+SGDDC+AVKSGWDEYGI++GMPTK LVIRRLTCISPYSA IALGSE
Sbjct: 237 DSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSE 296
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
MSGGI+DVRAEDI A TESGVRIKTAVGRG +VK+IYV+GM +HTMKW FWMTGNY +H
Sbjct: 297 MSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAH 356
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
AD+HYDP ALP I GINYRDIVA+NVSMA RLEGISGDPFTGICI+NATI MAAKHKK
Sbjct: 357 ADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAI 416
Query: 489 WTCADIGGMTSGVTPPPCELLPDQGPEKIR------ACDFPTESLPIDMVEMKKCTYRIN 542
W C+D+ G+TSGV P PC+LL Q E + CDFPT+ L ID VE+K C+Y+++
Sbjct: 417 WMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS 476
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/472 (73%), Positives = 403/472 (85%), Gaps = 8/472 (1%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFE---YNAISCRAHSASITDFGGVGDGKTSNTKA 135
++ ++ + LS S+ R L SFE Y AI+CR+HSASIT++GGVGDGKT NTKA
Sbjct: 4 ILACIVTIITLSNLITTSQGRRVLQSFETFEYTAITCRSHSASITEYGGVGDGKTLNTKA 63
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
F+ A++ LSQYSSDGGAQL+VPAGKWLTGSFNL SHFTL+LHKDA LLA+QDLNE+P++K
Sbjct: 64 FQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILK 123
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYL 255
LPSYGRGRDAA GR+ SL FGTNL+DVI+TG+NGTIDGQG+ WWQ+FH GKLKYTRPYL
Sbjct: 124 ALPSYGRGRDAAGGRFASLFFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYL 183
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
+E M++D IQIS+LT L+SPSWN+HPVYSSNI+V+G+TIIAPV SPNTDGINPDSCTNTR
Sbjct: 184 IELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTR 243
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
IEDCYI+SGDDC+AVKSGWDEYGI++GMPTK LVIRRLTCISPYSA IALGSEMSGGI+D
Sbjct: 244 IEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIED 303
Query: 376 VRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP 435
VRAEDI A TESGVRIKTAVGRG +VK+IYV+GM +HTMKW FWMTGNY +HAD+HYDP
Sbjct: 304 VRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDP 363
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIG 495
ALP I GINYRDIVA+NVSMA RLEGISGDPFTGICI+NATI MAAKHKK W C+D+
Sbjct: 364 HALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVE 423
Query: 496 GMTSGVTPPPCELLPDQGPEKIR-----ACDFPTESLPIDMVEMKKCTYRIN 542
G+TSGV P PC+LL Q E + CDFPT+ L ID VE+K C+Y+++
Sbjct: 424 GVTSGVDPKPCDLLDGQESETKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS 475
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/454 (74%), Positives = 398/454 (87%)
Query: 85 VVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLS 144
V+ LL G ESRK+ + D FEY A+SCRAHSAS++DFGGVGDG T NT+AF+ AI+ LS
Sbjct: 12 VLVLLCTIGVESRKSSKWDCFEYAAVSCRAHSASVSDFGGVGDGTTVNTEAFQAAIDHLS 71
Query: 145 QYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGR 204
Q+SS+GG+ LYVP G+WLTGSFNL S+FTLYL KDA LLASQD +E+P+I+PLPSYGRGR
Sbjct: 72 QFSSEGGSLLYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRGR 131
Query: 205 DAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNI 264
DA RY+SLIFG NLTDVI+TG NGTIDGQG LWW +F G+L +TRPYL+E M++ NI
Sbjct: 132 DADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNHTRPYLIEIMFSTNI 191
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
QIS+LTL+NSPSWNVHPVY SN++VQG+TI+APV SPNTDGINPDSCTNT+I+DCYIVSG
Sbjct: 192 QISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSG 251
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI 384
DDCVAVKSGWDEYGIA+GMPTKQ+VIRRLTCISP SA IALGSEMSGGI+DVRAEDI AI
Sbjct: 252 DDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAI 311
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGI 444
++ESGVRIKTAVGRGGYVKDIYVRGMT+ TMKW FWMTGNYGSH DN+YDP A+PVIQ I
Sbjct: 312 DSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNI 371
Query: 445 NYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPP 504
NYRD+VA+NV+MAARLEGI+GDPFTGICI+N TIG+A KK+ W C+D+ G+TS VTP
Sbjct: 372 NYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDVAGITSEVTPK 431
Query: 505 PCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
PC+LL DQGP KI AC++P ++LPI+ +E++ C+
Sbjct: 432 PCDLLSDQGPGKIGACNYPEDNLPIENMEVQTCS 465
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/463 (68%), Positives = 378/463 (81%), Gaps = 4/463 (0%)
Query: 76 VTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKA 135
+ K++P+++++ L R E R + ++ Y+AISCR HSA +TDFGGVGDGKTSNTK
Sbjct: 12 IFKVIPVVLILGSLGSRLGECRNVKISNTISYSAISCRKHSAVLTDFGGVGDGKTSNTKV 71
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
F+ AI LS+YS DGGAQL +PAGKWLTGSFNL SHFTL+LHK+A LLASQD EWP++
Sbjct: 72 FQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHFTLFLHKEAVLLASQDEAEWPILP 131
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYL 255
PLPSYGRGRDA GR++SLIFGTNL DV++TG+NGTIDGQGA WW +FHKG L TRPYL
Sbjct: 132 PLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTIDGQGATWWNKFHKGLLNQTRPYL 191
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
+E +Y+ IQIS+L L+NSPSWNVHP YSSN+L+QG+TI+APV SPNTDGINPDSCTNTR
Sbjct: 192 IELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTDGINPDSCTNTR 251
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
IEDCYIVSGDDC+AVKSGWD+YGI +GMPTK+LVIRRLTCISP SATIALGSEMSGGIQD
Sbjct: 252 IEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEMSGGIQD 311
Query: 376 VRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP 435
VRAEDI AINT+SG+RIKTA GRG YVKDI+VR M TMK+ FWMTG+YGSH D YDP
Sbjct: 312 VRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHPDKGYDP 371
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIG 495
ALP+I INYRDIVA+NV+ +ARLEGI DPFTGICI+NA I + K +K+ W C DI
Sbjct: 372 NALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQWNCTDIE 431
Query: 496 GMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
G+TS V P PC LLP + E C FP + LPI+ V++K C+
Sbjct: 432 GVTSNVNPRPCSLLPGKRLE----CPFPKDRLPIENVKLKTCS 470
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/438 (70%), Positives = 381/438 (86%)
Query: 103 DSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL 162
+ FEY+AISCRA+SAS+ +FG VGDG TSNTKAF+DA++QLS++ GG+ L+VPAG+WL
Sbjct: 53 EEFEYSAISCRAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWL 112
Query: 163 TGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTD 222
TG+FNL SHFTL+LH+DA +LASQ+ +++ VI+PLPSYGRGRD GR+ SL+FG+NLTD
Sbjct: 113 TGNFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTD 172
Query: 223 VIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
V++TG+NGTIDGQG WW +F +G+LKYTRPYL+E M++D IQIS+LT LNSPSW++HPV
Sbjct: 173 VVITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPV 232
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
YS NI +QG+TI+APVT PNTDGINPDSCTNTRIEDCYIVSGDDC+AVKSGWD+YGIAYG
Sbjct: 233 YSRNIFIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYG 292
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
MPTKQL+IRRLTCISP SA IALGSEMSGGI+DVRAEDI AI++ESG+RIKTA+GRGGYV
Sbjct: 293 MPTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYV 352
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEG 462
KD+YVRGMTM TMK+ FWMTG+YGSH D HYDPKALPVIQ INY+D+VA+NV+M A+L G
Sbjct: 353 KDVYVRGMTMKTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAG 412
Query: 463 ISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDF 522
ISGD FTGICI+N TI ++ K KKV W C D+ G TSGVTP PC+LLP++ P + C+F
Sbjct: 413 ISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPAPCQLLPEKQPGTVVPCNF 472
Query: 523 PTESLPIDMVEMKKCTYR 540
P + +PID V++++C R
Sbjct: 473 PDDPIPIDEVKLQRCYSR 490
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/438 (70%), Positives = 382/438 (87%)
Query: 103 DSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL 162
+ FEY+AISCRA+SAS+ +FG VGDG TSNT AF+DA++QLS+++ GG+ L+VPAG+WL
Sbjct: 54 EEFEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWL 113
Query: 163 TGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTD 222
TG+FNL SHFTL+LH+DA +LASQ+ +++ VI+PLPSYGRGRD GR+ SL+FG+NLTD
Sbjct: 114 TGNFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTD 173
Query: 223 VIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
V++TG+NGTIDGQG WW +F +G+LKYTRPYL+E M++D IQIS+LT LNSPSW++HPV
Sbjct: 174 VVITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPV 233
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
YSSNI +QG+TI+APVT PNTDGINPDSCTNTRIEDCYIVSGDDC+AVKSGWD+YGI YG
Sbjct: 234 YSSNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYG 293
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
MPTKQL+IRRLTCISP SA IALGSEMSGGI+DVRAEDI AIN+ESG+RIKTA+GRGGYV
Sbjct: 294 MPTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYV 353
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEG 462
KD+YVRGMTM TMK+ FWMTG+YGSH D+HYDPKALPVIQ INY+D+VA+NV+M A+L G
Sbjct: 354 KDVYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAG 413
Query: 463 ISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDF 522
ISGD FTGICI+N TI ++ K KKV W C D+ G TSGVTP PC+LLP++ P + C+F
Sbjct: 414 ISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNF 473
Query: 523 PTESLPIDMVEMKKCTYR 540
P + +PID V++++C R
Sbjct: 474 PEDPIPIDEVKLQRCYSR 491
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/438 (70%), Positives = 380/438 (86%)
Query: 103 DSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL 162
+ FEY+AISCRA+SAS+ +FG VGDG TSNT AF+DA++QLS+++ GG+ L+VPAG+WL
Sbjct: 53 EEFEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWL 112
Query: 163 TGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTD 222
TGSFNL SHFTL+LH+DA +LASQ+ +++ VI+PLPSYGRGRD GR+ SL+FG+NLTD
Sbjct: 113 TGSFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTD 172
Query: 223 VIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
V++TG+NGTIDGQG WW +F +G+LKYTRPYL+E M++D IQIS+LT LNSPSW++HPV
Sbjct: 173 VVITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPV 232
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
YS NI +Q +TI+APVT PNTDGINPDSCTNTRIEDCYIVSGDDC+AVKSGWD+YGI YG
Sbjct: 233 YSRNIFIQSLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYG 292
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
MPTKQL+IRRLTCISP SA IALGSEMSGGI+DVRAEDI AIN+ESG+RIKTA+GRGGYV
Sbjct: 293 MPTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYV 352
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEG 462
KD+YVRGMTM+TMK+ FWMTG+YGSH D HYDPKALPVIQ INY+D+VA+NV+M A+L G
Sbjct: 353 KDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAG 412
Query: 463 ISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDF 522
ISGD FTGICI+N TI ++ K KKV W C D+ G TSGVTP PC+LLP++ P + C+F
Sbjct: 413 ISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNF 472
Query: 523 PTESLPIDMVEMKKCTYR 540
P + +PID V++++C R
Sbjct: 473 PEDPIPIDEVKLQRCYSR 490
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/452 (72%), Positives = 369/452 (81%), Gaps = 47/452 (10%)
Query: 93 GAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA 152
GAESRK D FEY+AI+CRAHSAS+TDFGGVGDG TSNTKAF+ AI+ LSQ++SDGG+
Sbjct: 29 GAESRKHWVFDYFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGS 88
Query: 153 QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT 212
QL+VP G+WLTGSFNL SHFTLYLHKDA LLASQD +EWPVI PLPSYGRGRD GRY
Sbjct: 89 QLFVPPGRWLTGSFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYI 148
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLL 272
SLIFGTNLTDV++TG+NGTIDGQGALWW +FHKG+LKYTRPYL+E M++DN+QISSLTL+
Sbjct: 149 SLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLV 208
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSPSWNVHPVYSSN+++QG+TI APVTSPNTDGINPDSCTNTRIEDCYIVSGDDC+AVKS
Sbjct: 209 NSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKS 268
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
GWDEYGIAYGMPTKQLVIRRLTCISP+SATIALGSEMSGGI+DVRAEDI AI+TESGVRI
Sbjct: 269 GWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRI 328
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVAD 452
KTA GINYRD+VA+
Sbjct: 329 KTA-----------------------------------------------GINYRDMVAE 341
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQ 512
NV+MA RLEGISGDPFTGICI+N TIG+A K KK PWTC DI G+TSGV P PC+LLPDQ
Sbjct: 342 NVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQ 401
Query: 513 GPEKIRACDFPTESLPIDMVEMKKCTYRINYL 544
GPEKI AC+FPT+SLPID VE++ C+Y YL
Sbjct: 402 GPEKIVACNFPTDSLPIDTVEVQTCSYWGKYL 433
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/475 (66%), Positives = 386/475 (81%), Gaps = 3/475 (0%)
Query: 66 LSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGV 125
+S+ +L SQV + L++++ L+ + E + R L + EY AI+CR HSA +TDFGGV
Sbjct: 1 MSQTMKLCSQVIGAISLVLILGSLNVKVVECKVGRGLKNTEYYAINCRKHSAVLTDFGGV 60
Query: 126 GDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLAS 185
GDGKTSNTKAF+ AI +L QY+SDGGAQL VP GKWLTG FNL SHFTL+LHKDA +LAS
Sbjct: 61 GDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHKDAVILAS 120
Query: 186 QDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK 245
Q +EWP + LPSYGRGRDA GR++SLIFGT+LTDV++TG NGTIDGQG+ WW +FHK
Sbjct: 121 QVESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHK 180
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+L TRPY++E MY+D IQIS+LTL+NSPSW VHP+YSSNI ++G+TI+APV SPNTDG
Sbjct: 181 NQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDG 240
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI +G PT+ LVIRRLTCISP SA IAL
Sbjct: 241 IDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIAL 300
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSEMSGGIQDVR EDI AINT+S VRIKTAVGRGGYVKDI+V+GMT+ TMK+ FWMTG+Y
Sbjct: 301 GSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSY 360
Query: 426 GSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHK 485
GSH D +DPKALP I GINYRD+VA NV+ +A+LEGIS DPFTGICI+N +I ++ + K
Sbjct: 361 GSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKK 420
Query: 486 KVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
K+ W C D+ G+TS VTP C+LLP++G C FP + L I+ V++K C+ +
Sbjct: 421 KLQWNCTDVAGVTSNVTPNTCQLLPEKGKFD---CPFPNDKLSIENVQLKTCSIK 472
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/467 (67%), Positives = 386/467 (82%), Gaps = 3/467 (0%)
Query: 74 SQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNT 133
S V ++ L++++ L+ + A+ R A +L + EY AI+CR HSA +TDFGGVGDGKTSNT
Sbjct: 10 SYVIGVISLVLMLGSLNVKVAQCRVASKLVNIEYPAINCRKHSAVLTDFGGVGDGKTSNT 69
Query: 134 KAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPV 193
KAF+ AI++LS+ +SDGGAQL VP GKWLTGSFNL SHFTL+LHKDA +LASQD +EWP
Sbjct: 70 KAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDESEWPQ 129
Query: 194 IKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRP 253
+ LPSYGRGRDA GR++SLIFGT+LTDV++TG NGTIDGQG+ WW +FHK +L TRP
Sbjct: 130 LPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRP 189
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
Y++E MY+D IQIS+LTL+NSPSW VHP+YSSNI ++G+TI+APV SPNTDGI+PDSCTN
Sbjct: 190 YMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTN 249
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
TRIEDCYIVSGDDCVAVKSGWDEYGI +G PT+ LVIRRLTCISP SA IALGSEMSGGI
Sbjct: 250 TRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGI 309
Query: 374 QDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHY 433
QDVR EDI AINT+S VRIKTAVGRGGYVKDI+V+GMT+ TMK+ FWMTG+YGSH D +
Sbjct: 310 QDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAF 369
Query: 434 DPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCAD 493
DPKALP I GINYRD+VA NV+ +A+LEGIS DPFTGICI+N +I ++ + KK+ W C D
Sbjct: 370 DPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTD 429
Query: 494 IGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
+ G+TS VTP C+LLP++G C FP + L I+ V++K C+ +
Sbjct: 430 VAGVTSNVTPNTCQLLPEKGKFD---CPFPNDKLSIENVQLKTCSLQ 473
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/479 (64%), Positives = 380/479 (79%), Gaps = 7/479 (1%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESR--KARRLDSFEYNAISCRAHSASITD 121
M M R + + ++ ++ VV +L AE R + +L++F+Y AI+CR HSA +TD
Sbjct: 1 MSHQNMKSARFENSYVIGVISVVLILGSL-AECRVPSSIKLNNFDYPAINCRKHSAVLTD 59
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG VGDGKT NTKAF AI LSQY++DGGAQL VP GKWLTGSFNL SHFTL+L KDA
Sbjct: 60 FGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAV 119
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
+L SQD +EWP + LPSYGRGRDA AGR++SLIFGTNLTDVI+TGDNGTIDGQG+ WW
Sbjct: 120 ILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWD 179
Query: 242 QFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+FHK +L TRPY++E MY+D IQIS+LTL+NSP+W VHP+YSSNI++ G+TI+APV SP
Sbjct: 180 KFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSP 239
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
NTDGINPDSCTN RIED +IVSGDDC+A+KSGWDEYGI GMP++Q++IRRLTCISP SA
Sbjct: 240 NTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSA 299
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ALGSEMSGGIQDVR ED+ AINTES +RIK+AVGRG +VKDI+V+GM ++TMK+ FWM
Sbjct: 300 MVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWM 359
Query: 422 TGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMA 481
TG+YG H DN +DP ALP I GINYRD+ A NV++A +LEGIS DPFTGIC++N TI M+
Sbjct: 360 TGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMS 419
Query: 482 AKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
A KK+PW C DI G+TS V P PCELL EK C FPT+ L I+ V+ K C ++
Sbjct: 420 AHKKKLPWNCTDISGVTSNVVPKPCELL----QEKEIECPFPTDKLAIENVQFKTCNFQ 474
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/435 (70%), Positives = 364/435 (83%), Gaps = 4/435 (0%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
S EY AI+CR HSA +TDFGGVGDGKTSNTKAFK AI +LSQY+SDGGAQL VP GKWLT
Sbjct: 19 STEYQAINCRKHSAVLTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKWLT 78
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
GSFNL SHFTL+LHKDA LLASQD EWP PLPSYG GRD AGR++SLIFGT+LTDV
Sbjct: 79 GSFNLSSHFTLFLHKDAVLLASQDEAEWPAFPPLPSYGVGRDEHAGRFSSLIFGTHLTDV 138
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
+VTG+NGTIDGQGA+WW +FH+ KLK TRPYL+EF+Y+D +QIS+LTL+NSPSWNVHP Y
Sbjct: 139 VVTGNNGTIDGQGAVWWDKFHQKKLKLTRPYLIEFLYSDQVQISNLTLINSPSWNVHPTY 198
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
SN+L+Q +TI+APV SPNTDGINPDS +N RIED ++VSGDDC+AVKSGWDEYGI +G
Sbjct: 199 CSNVLIQWLTILAPVDSPNTDGINPDSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGR 258
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
PT+ LVIRR TCISP SATIALGSEMSGGIQDVRAEDI A++T+SGVRIKTAVGRG YVK
Sbjct: 259 PTQHLVIRRFTCISPDSATIALGSEMSGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVK 318
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
DI+VR MT+ TMK+AFWMTG+YGSH D YDPKALP I+GI+Y+DIVA+NV+ +ARLEGI
Sbjct: 319 DIFVRRMTLKTMKYAFWMTGSYGSHPDTGYDPKALPEIKGISYKDIVAENVTYSARLEGI 378
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
DPFTGICI+N I + K K++ W C DI G++S VTP PC L ++ E C FP
Sbjct: 379 ENDPFTGICISNVNISLTQKPKELQWNCTDIQGVSSKVTPQPCAALLEKSIE----CPFP 434
Query: 524 TESLPIDMVEMKKCT 538
+ LPI+ V+++ C+
Sbjct: 435 EDRLPIEDVKLQTCS 449
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/467 (65%), Positives = 383/467 (82%), Gaps = 5/467 (1%)
Query: 74 SQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNT 133
S V ++ ++++ L R E R A LD FEY AISCR HSA +TDFGGVGDGKTSNT
Sbjct: 10 SCVVGVIFTVLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNT 69
Query: 134 KAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPV 193
KAF+ AI+ LS Y+SDGGA L VP GKWLTGSFNL SHFTL+L K+A +L SQD +EWP
Sbjct: 70 KAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPT 129
Query: 194 IKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRP 253
+ LPSYGRGRDA GR++SLIFGTNLTDV++TG NGTIDGQG+ WW +FHKG+LK TRP
Sbjct: 130 LPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGYNGTIDGQGSYWWDKFHKGELKLTRP 189
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
Y++E M++D+IQIS+LTL++SPSW VHP+YSS+I++QG+TI+APV SPNTDGINPDSC+N
Sbjct: 190 YMIEIMFSDHIQISNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCSN 249
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
TRIEDCYIVSGDDCVA+KSGWDE GI +GMP++ ++IRRL C+SP SA IALGSEMSGGI
Sbjct: 250 TRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGI 309
Query: 374 QDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHY 433
+DVRAE++ A+NT+S VRIKTAVGRG YV+DI+V+GM ++TMK+ FWMTG+YGSH + +
Sbjct: 310 RDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHPNTDF 369
Query: 434 DPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCAD 493
DPKALP I GINYRD++ADNV+ +ARLEGI+ DPFTGICI+N TI + KK W C D
Sbjct: 370 DPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTI--HSGKKKPQWNCTD 427
Query: 494 IGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
I G+TS V P PCELLP + EKI C +P + LPI+ V++K C+++
Sbjct: 428 IEGVTSNVYPKPCELLPLK--EKIE-CPYPDDKLPIESVQLKTCSFK 471
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/468 (64%), Positives = 377/468 (80%), Gaps = 5/468 (1%)
Query: 73 RSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSN 132
S V ++ +L++ L++ + + +L +F+Y AI+CR HSA +TDFGGVGDGKT N
Sbjct: 14 NSYVIGVISVLLIFGSLAE--CKEPSSSKLKNFDYPAINCRKHSAVLTDFGGVGDGKTLN 71
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
TKAF AI LSQY++DGGAQL VP GKWLTGSFNL SHFTL+L KD+ +LASQD +EWP
Sbjct: 72 TKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDSVILASQDESEWP 131
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTR 252
LPSYG GR+A+ GR++SL+FGTNLTDVI+TG+NGTIDGQG+ WW +FHKG++K TR
Sbjct: 132 QFPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTIDGQGSYWWDKFHKGQMKITR 191
Query: 253 PYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCT 312
PY++E MY+D IQIS+LTL+NSPSW VHPVYSSNI++ G+TI+APV PNTDGI+PDSCT
Sbjct: 192 PYMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCT 251
Query: 313 NTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG 372
N RIED YIVSGDDC+A+KSGWDEYGI +G P++Q++IRRLTCISP SA +ALGSEMSGG
Sbjct: 252 NVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEMSGG 311
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
IQDVR ED+ AI TES VRIKTA+GRG YVKDI+V+GM + TMK+ FWMTG+Y SH DN
Sbjct: 312 IQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNG 371
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
+DP ALP I INYRD+ A NV++A +L+GIS DPFTGIC++NATI M+A KK+PW C
Sbjct: 372 FDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCT 431
Query: 493 DIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
D+ G+TS V+P PCELL ++ EK C FPT+ L I+ V+ K C ++
Sbjct: 432 DVSGVTSNVSPTPCELLAEK--EKFE-CPFPTDKLTIENVQFKTCNFK 476
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/467 (65%), Positives = 381/467 (81%), Gaps = 4/467 (0%)
Query: 74 SQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNT 133
S V ++ ++++ L R E R A LD FEY AISCR HSA +TDFGGVGDGKTSNT
Sbjct: 10 SCVVGVIYTVLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNT 69
Query: 134 KAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPV 193
KAF+ AI+ LS Y+SDGGA L VP GKWLTGSFNL SHFTL+L K+A +L SQD +EWP
Sbjct: 70 KAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPT 129
Query: 194 IKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRP 253
+ LPSYGRGRDA GR++SLIFGTNLTDVI+TG NGTIDGQG WW +FHKG+LK TRP
Sbjct: 130 LPVLPSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRP 189
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
Y++E M++D+IQIS+LTL+NSPSW VHP+Y+S+I++QG+TI+APV SPNTDGI+PDSC+N
Sbjct: 190 YMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPDSCSN 249
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
RIEDCYIVSGDDCVA+KSGWDEYGI +GMP++ ++IRRL C+SP SA IALGSEMSGGI
Sbjct: 250 IRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGI 309
Query: 374 QDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHY 433
QDVRAED+ AINT+S VRIKTAVGRG YV+DI+++GM ++TMK+ FWMTG+Y SH DN +
Sbjct: 310 QDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHPDNGF 369
Query: 434 DPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCAD 493
DPK LP I GINYRD++A+NV+ +ARLEGI+ DPFTGICI+N TI + KK+ W C D
Sbjct: 370 DPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTI--HSGKKKLQWNCTD 427
Query: 494 IGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
I G+TS V P PCELLP + EKI C +P + + I+ V++K C+++
Sbjct: 428 IEGVTSNVYPKPCELLPLK-QEKIE-CPYPDDKVSIESVQLKTCSFK 472
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/444 (68%), Positives = 367/444 (82%), Gaps = 3/444 (0%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
AE R + L + E+ A++CR HSA +TDFGGVGDGKTSNTKAF+ AI++LS+ +SDGGA
Sbjct: 33 AECRSKQPLGNLEFLALNCRKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAA 92
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
L VP GKWLTGSFNL SHFTLY+HKDA LL SQ +EWP + LPSYGRGRDAA GR +S
Sbjct: 93 LVVPPGKWLTGSFNLTSHFTLYIHKDAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSS 152
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLN 273
LIFGTNLTDV+VTG NGTIDGQGA WW +F K +L TRPYL+E MY++ +QIS+LT +N
Sbjct: 153 LIFGTNLTDVVVTGANGTIDGQGAYWWGKFKKNQLDVTRPYLIEIMYSNQVQISNLTFVN 212
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SPSWNVHP+YSSN+++QG+TI+APV SPNTDGI+PDSCT+ RIEDCYIVSGDDC+AVKSG
Sbjct: 213 SPSWNVHPIYSSNVIIQGLTILAPVDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSG 272
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
WD+YGI GMPT++LVIRR+TCISP SATIALGSEMSGGI+DVRAEDI AI+T+SGVRIK
Sbjct: 273 WDQYGIKVGMPTQRLVIRRVTCISPDSATIALGSEMSGGIRDVRAEDITAIDTQSGVRIK 332
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADN 453
T VGRGGYVKDIYVR MTM TMK+ FWMTG+YG H D +DPKALP I GINYRD+VA+N
Sbjct: 333 TGVGRGGYVKDIYVRRMTMKTMKYVFWMTGSYGQHPDPGFDPKALPDIHGINYRDMVAEN 392
Query: 454 VSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
V+ +ARL+GI DPF GICI N TI + K K++ W C D+ G+TS VTPP C LLP++
Sbjct: 393 VTYSARLDGIPNDPFKGICIFNVTITLTKKPKELQWNCTDVQGVTSRVTPPACSLLPEKK 452
Query: 514 PEKIRACDFPTESLPIDMVEMKKC 537
P C FP + LP++ +++K+C
Sbjct: 453 PVD---CPFPADRLPVEDLKLKRC 473
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/438 (68%), Positives = 363/438 (82%), Gaps = 7/438 (1%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSD--GGAQLYVPAGKWLTG 164
Y A +CRAH+AS+ DFGGVGDG TSNT AF+ A++ LSQYS + GGA LYVPAGKWLTG
Sbjct: 51 YLAPACRAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKWLTG 110
Query: 165 SFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI 224
FNL SHFTL+LH DA +LASQD+NEWP+I PLPSYGRGRD GR+ SL+ G+NLTDV+
Sbjct: 111 PFNLTSHFTLFLHSDAVILASQDINEWPIIDPLPSYGRGRDKIGGRFASLVGGSNLTDVV 170
Query: 225 VTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
+TG+NGTIDGQGA+WW +FHK +LKYTR YL+E M++D I IS+LTLLNSP+WN+HPVYS
Sbjct: 171 ITGNNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYS 230
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
SNI+VQGITI+AP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWDEYGI+YGMP
Sbjct: 231 SNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMP 290
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
++ +VIRRLTC+SP SA IALGSEMSGGIQDVRAEDI AIN+ESGVRIKTAVGRG YVKD
Sbjct: 291 SQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKD 350
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV-SMAARLEGI 463
++VR MT+ TMKW FWMTGNY SH D+ YDP A+PV+ I+Y+D+VA V AARLEGI
Sbjct: 351 VFVRRMTLTTMKWVFWMTGNYKSHPDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGI 410
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
G PF GIC+AN T + +K +K PWTCAD+ G++ V+P PC+ P QG AC FP
Sbjct: 411 QGAPFKGICVANVTADL-SKSRKYPWTCADVEGVSVNVSPAPCQ--PLQGAHD-GACPFP 466
Query: 524 TESLPIDMVEMKKCTYRI 541
T++LPID V +++C Y +
Sbjct: 467 TDTLPIDQVTVQQCAYDV 484
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/438 (68%), Positives = 361/438 (82%), Gaps = 7/438 (1%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGG--AQLYVPAGKWLTG 164
Y A SCRAH+AS+TDFGGVGDG TSNT AFK A++ LSQYS +GG A LYVPAGKWLTG
Sbjct: 48 YLAPSCRAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTG 107
Query: 165 SFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI 224
FNL SHFTL+LH DA +L SQD+ EWP+I PLPSYGRGRD A GRY SLI G+NLTDV+
Sbjct: 108 PFNLTSHFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVV 167
Query: 225 VTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
+TG NGTIDGQGA+WW +FH KLKYTR YL+E M++D + IS++TL+NSP+WN+HPVYS
Sbjct: 168 ITGANGTIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYS 227
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
SNI+VQG+TI+AP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWDEYGIAYGMP
Sbjct: 228 SNIVVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMP 287
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
++ +V+RRLTC+SP SA IALGSEMSGGI DVRAEDI A+N+ES VRIKTAVGRG YV+D
Sbjct: 288 SQHIVVRRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRD 347
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV-SMAARLEGI 463
++VRGM++ TMKW FWMTGNY SH D+ YDP A+PV+ I+Y+D+VA V AARLEGI
Sbjct: 348 VFVRGMSLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGI 407
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
G PF GICIAN T + +K +K PWTC DI G+++GVTP PC+ P QG AC FP
Sbjct: 408 QGAPFRGICIANVTATL-SKSRKYPWTCTDIEGVSTGVTPAPCQ--PLQGAHD-GACPFP 463
Query: 524 TESLPIDMVEMKKCTYRI 541
T++LPID + M++C Y +
Sbjct: 464 TDTLPIDQLVMQQCAYSV 481
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/455 (65%), Positives = 365/455 (80%), Gaps = 2/455 (0%)
Query: 83 LIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ 142
+I++ALLS E +++ + + AISCR H+A ITDFGGVGDG TSNT+AF+ AI
Sbjct: 20 VILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRAIEH 79
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGR 202
LS ++DGGAQL VP GKWLTGSFNL SHFTL++HKDA +L SQ+ +EWP + LPSYG
Sbjct: 80 LSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALLPSYGV 139
Query: 203 GRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTD 262
GRDA GRY+SLIFGTNLTDV++TG+NGTIDGQGA WW +FHKG+L TRPYL+E MY+D
Sbjct: 140 GRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIMYSD 199
Query: 263 NIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIV 322
IQIS LTL+NSPSW VHP+YS N+++QG+TI+AP+ SPNTDGI+PDSC+NTRIEDC+IV
Sbjct: 200 QIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDCFIV 259
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK 382
SGDDC+AVKSGWD+YGI +GMPT+ LVI+RLTCISP SA +ALGSEMSGGI++VR E+
Sbjct: 260 SGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIENFT 319
Query: 383 AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQ 442
INT+S VRIKTA GRGG+VKDI+VRGM + TMK+ FWMTGNY SH D+ +DP ALP I
Sbjct: 320 GINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALPEIT 379
Query: 443 GINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVT 502
INYRD+VA+NV+ +ARLEGISGDPFT ICI+N IG+ A KK+ W C D+ G +S V
Sbjct: 380 NINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSSDVV 439
Query: 503 PPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKC 537
PPPC L G K CDFP + LPI+ V++K C
Sbjct: 440 PPPCAPLAKAG--KSGGCDFPEDQLPIERVQLKTC 472
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/455 (65%), Positives = 365/455 (80%), Gaps = 2/455 (0%)
Query: 83 LIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ 142
+I++ALLS E +++ + + AISCR H+A ITDFGGVGDG TSNT+AF+ AI
Sbjct: 20 VILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRAIEH 79
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGR 202
LS ++DGGAQL VP GKWLTGSFNL SHFTL++HKDA +L SQ+ +EWP + LPSYG
Sbjct: 80 LSSLAADGGAQLTVPXGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALLPSYGV 139
Query: 203 GRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTD 262
GRDA GRY+SLIFGTNLTDV++TG+NGTIDGQGA WW +FHKG+L TRPYL+E MY+D
Sbjct: 140 GRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIMYSD 199
Query: 263 NIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIV 322
IQIS LTL+NSPSW VHP+YS N+++QG+TI+AP+ SPNTDGI+PDSC+NTRIEDC+IV
Sbjct: 200 QIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDCFIV 259
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK 382
SGDDC+AVKSGWD+YGI +GMPT+ LVI+RLTCISP SA +ALGSEMSGGI++VR E+
Sbjct: 260 SGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIENFT 319
Query: 383 AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQ 442
INT+S VRIKTA GRGG+VKDI+VRGM + TMK+ FWMTGNY SH D+ +DP ALP I
Sbjct: 320 GINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALPEIT 379
Query: 443 GINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVT 502
INYRD+VA+NV+ +ARLEGISGDPFT ICI+N IG+ A KK+ W C D+ G +S V
Sbjct: 380 NINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSSDVV 439
Query: 503 PPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKC 537
PPPC L G K CDFP + LPI+ V++K C
Sbjct: 440 PPPCAPLAKAG--KSGGCDFPEDQLPIERVQLKTC 472
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/437 (68%), Positives = 363/437 (83%), Gaps = 3/437 (0%)
Query: 101 RLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGK 160
++ S Y AI+CR HSA +TDFGGVGDG TSNTKAF+ AI++LSQY+SDGGA L VP GK
Sbjct: 32 KVASGVYYAINCRKHSAVLTDFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGK 91
Query: 161 WLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNL 220
WLTG FNL SHFTL+L A +LASQD +EWP + LPSYGRGRDA GR++SLIFGT+L
Sbjct: 92 WLTGPFNLTSHFTLFLDFGAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHL 151
Query: 221 TDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
TDV++TG+NG IDGQGA WW +FH+G+L TRPYL+E MY+D IQIS LTL+NSP+W VH
Sbjct: 152 TDVVITGNNGLIDGQGAYWWNKFHQGQLTLTRPYLIEIMYSDQIQISFLTLVNSPTWFVH 211
Query: 281 PVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 340
PVYSSNI+++G+TI APV SPNTDGINPDSC+N RIEDC I SGDDC+AVKSGWDEYGI
Sbjct: 212 PVYSSNIIIKGLTIKAPVDSPNTDGINPDSCSNIRIEDCNITSGDDCIAVKSGWDEYGIR 271
Query: 341 YGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG 400
+GMPT+ L+IRR+TC+SP SA IALGSEMSGGI DVRAED+ AINTE+ VRIKTA+GRGG
Sbjct: 272 FGMPTQHLIIRRITCVSPDSAMIALGSEMSGGIYDVRAEDLTAINTEAAVRIKTAIGRGG 331
Query: 401 YVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARL 460
YVK+I+V+GM ++TMK+ FW+TG YG H D YDPKALP I GINYRD+VA NV+ +ARL
Sbjct: 332 YVKNIFVKGMNLNTMKYVFWITGTYGDHPDPGYDPKALPYITGINYRDVVATNVTKSARL 391
Query: 461 EGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC 520
EGIS DPFTGICI+N +I ++ + KK+ W C++I G+TS VTP PC LLP++G + C
Sbjct: 392 EGISNDPFTGICISNVSIQVSEQQKKLQWNCSNISGVTSNVTPYPCALLPEKGQLE---C 448
Query: 521 DFPTESLPIDMVEMKKC 537
FPT++LPID V++K C
Sbjct: 449 PFPTDTLPIDNVQLKSC 465
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/460 (64%), Positives = 369/460 (80%), Gaps = 4/460 (0%)
Query: 82 LLIVVALLSQRGAESRKARR--LDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDA 139
LL+ +A+ ESR R E++A++CR HSA +TDFG VGDGKTSNTKAF++A
Sbjct: 8 LLVFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNA 67
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
I++LSQ ++DGGAQL VP GKWLTGSFNL SHFTL++ + A +LASQD +EWPVI PLPS
Sbjct: 68 ISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPS 127
Query: 200 YGRGRDAAA-GRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEF 258
YG+GRD GR+ SLI GTNLTDV++TG+NGTI+GQG WW +F K + K TRPYL+E
Sbjct: 128 YGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEI 187
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+++ NIQIS++TL++SPSWN+HPVY ++++V+ +T++APVT PNTDGINPDSCTNT IED
Sbjct: 188 LFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIED 247
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
CYIVSGDDC+AVKSGWD+YGI +GMPT+QL IRRLTCISP SA +ALGSEMSGGI+DVR
Sbjct: 248 CYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRI 307
Query: 379 EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
ED+ NTES +RIKTAVGRG YVKDIY R +TM TMK+ FWM+GNYGSH D +DPKAL
Sbjct: 308 EDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKAL 367
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
P I INYRD+ A+NV+M+A L+GI DPFTGICI+N TI +AAK KK+ W C D+ G+T
Sbjct: 368 PEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVT 427
Query: 499 SGVTPPPCELLPDQGPE-KIRACDFPTESLPIDMVEMKKC 537
S VTP PC LLP++ + K C FP++ +PI+ V +KKC
Sbjct: 428 SRVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 467
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 293/461 (63%), Positives = 369/461 (80%), Gaps = 4/461 (0%)
Query: 82 LLIVVALLSQRGAESRKARRLDS--FEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDA 139
+L+++A+LS ESR + + S ++A++CR HSA +TDFG VGDGKTSNT AFK A
Sbjct: 8 ILVILAILSFPAIESRSHQNVVSSGIRFSALNCRKHSAILTDFGAVGDGKTSNTNAFKKA 67
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
I++LSQ ++DGGAQL VP GKWLTGSFNL SHFTL++ + A +LASQD +EWPVI PLPS
Sbjct: 68 ISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPS 127
Query: 200 YGRGRDAAA-GRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEF 258
YG+GRD GR+ SLI GTNLTDV++TG+NGTI+GQG WW +F K + K TRPYL+E
Sbjct: 128 YGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKLTRPYLIEL 187
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+++ NIQIS++TL++SPSWN+HPVY +N++V+ +T++APVT PNTDGINPDSCTNT IED
Sbjct: 188 LFSKNIQISNITLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINPDSCTNTLIED 247
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
CYIVSGDDC+AVKSGWD+YGI +GMPT+QL IRRLTCISP SA +ALGSEMSGGI+DVR
Sbjct: 248 CYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRI 307
Query: 379 EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
ED+ NTES +RIKTA GRG YVKDI+ R +TM TMK+ FWM+GNY SH D +DPKAL
Sbjct: 308 EDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSHPDEGFDPKAL 367
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
P + INYRD+ A+NV+M+A L+GI DPFTGICI+N TI +A K KKV W C D+ G+T
Sbjct: 368 PEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQWNCTDVAGVT 427
Query: 499 SGVTPPPCELLPD-QGPEKIRACDFPTESLPIDMVEMKKCT 538
S VTP PC LLP+ + P K C FP++ +PI+ V +KKC+
Sbjct: 428 SRVTPEPCSLLPEKKAPAKNEDCAFPSDLIPIESVVLKKCS 468
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 292/457 (63%), Positives = 364/457 (79%), Gaps = 4/457 (0%)
Query: 84 IVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQL 143
IV+ L+S + +L+SF+Y+AI+CR H+A +TDFG VGDGKT NTKAF AI L
Sbjct: 22 IVLILVSLAECREPSSIKLNSFDYHAINCRKHNAVLTDFGAVGDGKTLNTKAFNSAITNL 81
Query: 144 SQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRG 203
SQY++DGGAQL VP GKWLTGSFNL SHFTL+L K A +LASQD +EWP + LPSYGR
Sbjct: 82 SQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILASQDESEWPKLSFLPSYGRE 141
Query: 204 RDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDN 263
+DA GR++SLIFGTNLTDV++TG+NGTIDGQG+ WW +F K +LK TRPY++E MY+D
Sbjct: 142 KDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQ 201
Query: 264 IQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVS 323
IQIS+LTL+NSP+W VHP+YSSNI++ +TI+APV PNTDGI+PDSCTN IED YIVS
Sbjct: 202 IQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVLIEDNYIVS 261
Query: 324 GDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKA 383
GDDC+A+KSG D YGI G P++++++RRLTCISP SA +ALGSEMSGGIQD+R EDI A
Sbjct: 262 GDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQDIRIEDITA 321
Query: 384 INTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQG 443
INTES VRIKTAVGRG YVKDI+V+GM ++TMK+ FWMTG Y SHA+N +DPKALP I G
Sbjct: 322 INTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDPKALPKISG 381
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTP 503
INYRDI+A NV++A +L+GIS DPFTGICI+N TI M+A+ +PW C D+ G+ S P
Sbjct: 382 INYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVSGVASNAVP 441
Query: 504 PPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
PC++L PEK C FPT+ LPI+ V+ K C ++
Sbjct: 442 KPCDML----PEKKIECPFPTDKLPIENVQFKTCNFQ 474
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 294/449 (65%), Positives = 359/449 (79%), Gaps = 6/449 (1%)
Query: 94 AESR--KARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGG 151
AE R +L++F+Y AI+CR HSA +TDFGGVGDGKT NTKAF AI LSQY++DGG
Sbjct: 39 AECRIPSISKLNNFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGG 98
Query: 152 AQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY 211
AQL VP GKWLTGSFNL SHFTL+L KDA +LASQ ++WP + LPSYGRGR+ GR+
Sbjct: 99 AQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRF 158
Query: 212 TSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTL 271
+SLIFGTNL DVI+TG+NGTIDGQG+ WW +F K +LK TRPY++E MY+D IQIS+LTL
Sbjct: 159 SSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTL 218
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
+NSPSW VHPVYSSNI++ G+TI+APV PNTDGI+PDS TN IED YIVSGDDC+A+K
Sbjct: 219 VNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIK 278
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SGWDEYGI G P++ +++RRLTCISP SA +ALGSEMSGGIQDVR ED+ AINTES VR
Sbjct: 279 SGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVR 338
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IK+AVGRG +VKDI+V+GM ++T+K+ FWMTG+YG H DN +DP ALP I GINYRD+ A
Sbjct: 339 IKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTA 398
Query: 452 DNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPD 511
NV++A ++EGIS DPFTGIC++N TI M+A KK+PW C DI G+TS V P PCELL
Sbjct: 399 KNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELL-- 456
Query: 512 QGPEKIRACDFPTESLPIDMVEMKKCTYR 540
EK C FP + LPI+ V+ K C ++
Sbjct: 457 --KEKEIECPFPRDKLPIENVQFKTCNFQ 483
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 300/456 (65%), Positives = 363/456 (79%), Gaps = 7/456 (1%)
Query: 89 LSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSS 148
+S R + AR Y A +CRAH+AS+ DFGGVGDG TSNT AF+ A++ LSQYS
Sbjct: 51 VSGRRHGASPARGSGQSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSG 110
Query: 149 DGGA--QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDA 206
+GG LYVPAGKWLTG FNL SHFTLYLH+DA +L SQD+ EWP++ PLPSYGRGRD
Sbjct: 111 EGGGGGMLYVPAGKWLTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDK 170
Query: 207 AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQI 266
GR+ SLI G+NLTDV++TG NGTIDGQGA+WW +FHK +LKYTR YL+E M++D I I
Sbjct: 171 VGGRFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYI 230
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
S+LTLLNSP+WN+HPVYSSNI+VQGITI+AP SPNTDGINPDSC++ RIEDCYIVSGDD
Sbjct: 231 SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDD 290
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
CVA+KSGWDEYGI+YGMP++ +VIRRLTC+SP SA IALGSEMSGGIQDVRAEDI AINT
Sbjct: 291 CVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINT 350
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
ES VRIKTAVGRG YV+D++ R MT+ TMK FWMTG+Y SH D+ YDP A+PV+ I+Y
Sbjct: 351 ESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISY 410
Query: 447 RDIVADNV-SMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPP 505
+D+VA V AARL+GI G PF GIC+AN T + +K +K PW CADI G+++ V+P P
Sbjct: 411 QDVVATGVYKEAARLQGIQGAPFRGICVANVTADL-SKSRKYPWNCADIEGVSANVSPAP 469
Query: 506 CELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRI 541
C+ P QG AC FPT++LPID V +++C Y I
Sbjct: 470 CD--PLQGAHD-GACPFPTDTLPIDQVTVQQCAYDI 502
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/456 (65%), Positives = 363/456 (79%), Gaps = 7/456 (1%)
Query: 89 LSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSS 148
+S R + AR Y A +CRAH+AS+ DFGGVGDG TSNT AF+ A++ LSQYS
Sbjct: 31 VSGRRHGASPARGSGQSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSG 90
Query: 149 DGGA--QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDA 206
+GG LYVPAGKWLTG FNL SHFTLYLH+DA +L SQD+ EWP++ PLPSYGRGRD
Sbjct: 91 EGGGGGMLYVPAGKWLTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDK 150
Query: 207 AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQI 266
GR+ SLI G+NLTDV++TG NGTIDGQGA+WW +FHK +LKYTR YL+E M++D I I
Sbjct: 151 VGGRFASLIGGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYI 210
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
S+LTLLNSP+WN+HPVYSSNI+VQGITI+AP SPNTDGINPDSC++ RIEDCYIVSGDD
Sbjct: 211 SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDD 270
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
CVA+KSGWDEYGI+YGMP++ +VIRRLTC+SP SA IALGSEMSGGIQDVRAEDI AINT
Sbjct: 271 CVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINT 330
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
ES VRIKTAVGRG YV+D++ R MT+ TMK FWMTG+Y SH D+ YDP A+PV+ I+Y
Sbjct: 331 ESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISY 390
Query: 447 RDIVADNV-SMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPP 505
+D+VA V AARL+GI G PF GIC+AN T + +K +K PW CADI G+++ V+P P
Sbjct: 391 QDVVATGVYKEAARLQGIQGAPFRGICVANVTADL-SKSRKYPWNCADIEGVSANVSPAP 449
Query: 506 CELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRI 541
C+ P QG AC FPT++LPID V +++C Y I
Sbjct: 450 CD--PLQGAHD-GACPFPTDTLPIDQVTVQQCAYDI 482
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/438 (67%), Positives = 357/438 (81%), Gaps = 7/438 (1%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA--QLYVPAGKWLTG 164
Y A +CRAH+AS+ DFGGVGDG TSNT AF+ A++ LSQYS +GG LYVPAGKWLTG
Sbjct: 2 YLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTG 61
Query: 165 SFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI 224
FNL SHFTLYLH+DA +L SQD+ EWP++ PLPSYGRGRD GR+ SLI G+NLTDV+
Sbjct: 62 PFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVV 121
Query: 225 VTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
+TG NGTIDGQGA+WW +FHK +LKYTR YL+E M++D I IS+LTLLNSP+WN+HPVYS
Sbjct: 122 ITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYS 181
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
SNI+VQGITI+AP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWDEYGI+YGMP
Sbjct: 182 SNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMP 241
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
++ +VIRRLTC+SP SA IALGSEMSGGIQDVRAEDI AINTES VRIKTAVGRG YV+D
Sbjct: 242 SQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRD 301
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV-SMAARLEGI 463
++ R MT+ TMK FWMTG+Y SH D+ YDP A+PV+ I+Y+D+VA V AARL+GI
Sbjct: 302 VFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGI 361
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
G PF GIC+AN T + +K +K PW CADI G+++ V+P PC+ P QG AC FP
Sbjct: 362 QGAPFRGICVANVTADL-SKSRKYPWNCADIEGVSANVSPAPCD--PLQGAHD-GACPFP 417
Query: 524 TESLPIDMVEMKKCTYRI 541
T++LPID V +++C Y I
Sbjct: 418 TDTLPIDQVTVQQCAYDI 435
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/436 (67%), Positives = 354/436 (81%), Gaps = 7/436 (1%)
Query: 106 EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGS 165
EY AI+CR HSA +TDFG VGDGKTSNTKAF +AI +LS+Y+ DGGAQL VPAGKWLTGS
Sbjct: 3 EYKAINCRKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGS 62
Query: 166 FNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAA-GRYTSLIFGTNLTDVI 224
FNL SHFTL+LHKDA LLASQD +EWP++ PLPSYG R+ A GR LIF +N+TDVI
Sbjct: 63 FNLTSHFTLFLHKDAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRPGGLIFASNVTDVI 122
Query: 225 VTGDNGTIDGQGALWWQQFHKGKLK-YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
+TG+NGT+DGQGA+WW++F++ KLK RPYL+E MY+D +QIS++TL+NSP W+VHP+Y
Sbjct: 123 ITGNNGTVDGQGAVWWEKFNEKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIY 182
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
SSN+ +QG+TI+APV PNTDGINPDSCTN IEDCYIVSGDDC+AVKSG D+YGI GM
Sbjct: 183 SSNLWIQGVTILAPVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGM 242
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
P KQLVIRR+TCISP SA IALGSEMSGGI+DVR EDI AINTES VR+KTAVGRGGYVK
Sbjct: 243 PMKQLVIRRITCISPKSAAIALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVK 302
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
DI+VR MT+ TMK+ FWM G+Y SHAD YDPKALP I IN+RDI ADNV++ +LEG+
Sbjct: 303 DIFVRRMTLKTMKYVFWMIGSYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGL 362
Query: 464 -SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDF 522
G+PFTGICI+N T+ +A KHK+ W C D+ G++S VTP PC L P+K C F
Sbjct: 363 GEGNPFTGICISNVTMTLAEKHKEPAWNCTDVSGVSSNVTPMPCAAL----PKKSMDCPF 418
Query: 523 PTESLPIDMVEMKKCT 538
P + LPI+ V ++ C+
Sbjct: 419 PEDKLPIEKVRLQTCS 434
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/476 (63%), Positives = 369/476 (77%), Gaps = 13/476 (2%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQ-RGAESRKARRLDSFEYNAISCRAHSASITDF 122
ME S R +S + + L++V L+S RG S EY AI+CR HSA +TDF
Sbjct: 1 MEFSLYPR-KSHLFRFHVLVVVGLLMSSVRGGGSE--------EYRAINCRKHSAVLTDF 51
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
G GDGKT NTKAFK AI LSQ + DGGAQL VP GKWLTGSFNL SHFTL++HKDA +
Sbjct: 52 GAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDAVI 111
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
L +QD +P+I+ LPSYG GRD GR+ SLIFGTNLTDV++TG NGTI GQG WW +
Sbjct: 112 LGAQDEAAYPLIEILPSYGAGRDGG-GRHASLIFGTNLTDVVITGGNGTIHGQGQYWWDK 170
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
F KLK TRPYL+E MY+D +QIS+L L++SPSWNVHP YSSN+++Q +TIIAPV SPN
Sbjct: 171 FRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPN 230
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDS N IEDC+IVSGDDC+AVKSGWD+YGI +GMPT+ L+IRRLTCISP SA
Sbjct: 231 TDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAV 290
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGI++VRAE+I AI++ESGVRIK+ VGRGGYVKDIY RGMTM TMK+ FWMT
Sbjct: 291 IALGSEMSGGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMT 350
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
G+YG H D+ +DPKALP I+ INYRD+VA+NV+ +ARL+GISGDPFTGICI+N IG+
Sbjct: 351 GDYGQHPDDGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTE 410
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
K KK+ W C ++ G++S VTPP C+LL +K+ C FP + LPI+ V+MK C+
Sbjct: 411 KPKKLQWNCTNVEGVSSQVTPPSCDLL--HPSKKVFNCPFPEDKLPIEDVQMKICS 464
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/476 (61%), Positives = 375/476 (78%), Gaps = 6/476 (1%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFG 123
ME SR + +V ++++ LLS R AE + + ++ +Y A+ CR HSA +TDFG
Sbjct: 1 MEFCLNSR-KPHALGIVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLTDFG 59
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
GDGKT NTKAFK AI+ LSQ++ DGGA+L VP GKWLTGSFNL SHFTLY+ KDA +L
Sbjct: 60 ATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVIL 119
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
+QD + +P+I+ LPSYG GRD GR++SLIFGTNLTDV++TG NGT++GQG WW +F
Sbjct: 120 GAQDESAYPLIEVLPSYGVGRDGG-GRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKF 178
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
K TRPYL+E MY++++QIS+LTL++SPSWNVHPVYS N+LV+ +TI+AP+ SPNT
Sbjct: 179 RAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNT 238
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGINPDSC RIEDC+IVSGDDC+AVKSGWD+YG +GMPTK L+IRRLTCISP SATI
Sbjct: 239 DGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATI 298
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
ALGSEMSGGI++V AEDI AI+T+SG+RIKT +GRGGYVKDIYVR MT+ TMK+ FW+TG
Sbjct: 299 ALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITG 358
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
+YGSH D+ +DPKALPVI+ INYRD+VA+NV+ +ARL+GISGDPFTGICI+N TIG+ K
Sbjct: 359 DYGSHPDDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTEK 418
Query: 484 HKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTY 539
K++ W C ++ G+TS VTP C+LLP +K+ C FP P V++K C++
Sbjct: 419 PKELQWNCTNVAGVTSQVTPRSCDLLPPS--DKVFNCPFPDH--PHWDVKLKTCSH 470
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/440 (65%), Positives = 360/440 (81%), Gaps = 7/440 (1%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
+ +Y AI+CR HSA +TDFGGVGDGKTSNTKAF AI +LSQY++DGGAQL VP GKWLT
Sbjct: 37 NLDYLAINCRKHSAVLTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLT 96
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
GSFNL SHFTL+L K A +L SQD ++WP + PLPSYGRGRDA R++SLIFGT+LTDV
Sbjct: 97 GSFNLTSHFTLFLQKGAVILGSQDESQWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDV 156
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
I+TG+NGTIDGQG+ WW +FH +LK TRPY++E +Y+D IQIS+LTL+NSPSW VHP Y
Sbjct: 157 IITGNNGTIDGQGSYWWDKFHNKQLKITRPYMIEILYSDQIQISNLTLINSPSWFVHPTY 216
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
SSNI+++G+TI+APV SPNTDGI+PDS TN RIED YIVSGDDC+A+KSGWD+YGI +G
Sbjct: 217 SSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGK 276
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
P+KQ++IRRLTCISP SA IALGSEMSGGI++VR ED+ AINTES VRIK+AVGRGGYVK
Sbjct: 277 PSKQIIIRRLTCISPDSAMIALGSEMSGGIENVRVEDVTAINTESAVRIKSAVGRGGYVK 336
Query: 404 DIYVRGMTMHT-MKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEG 462
DI+V+G+ ++T +++ FW+TG+YG H DN +DPKALP I GI +RD++A NV++A +LEG
Sbjct: 337 DIFVKGVKLNTILRYVFWLTGSYGDHPDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEG 396
Query: 463 ISGDPFTGICIANATIGMA--AKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC 520
IS DPFTGICI+N TI ++ K KK+PW C D+ G+TS V P PC+LL EK C
Sbjct: 397 ISNDPFTGICISNVTIELSELKKKKKLPWNCTDVSGVTSNVVPKPCDLL----SEKKIEC 452
Query: 521 DFPTESLPIDMVEMKKCTYR 540
FPT+ L I+ V+ K C +
Sbjct: 453 PFPTDKLAIEDVQFKTCNIK 472
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 281/429 (65%), Positives = 356/429 (82%), Gaps = 5/429 (1%)
Query: 112 CRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISH 171
CR HSA +T+FGG+GDGKTSNTKAFK AI+ L Q+++DGGA+L VP GKWLTGSFNL SH
Sbjct: 1 CRKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSH 60
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
FTLY+HKDA +L SQ+ +++P I PLPSYG+GRD GR++SLIFGTNLTDV++ G NGT
Sbjct: 61 FTLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDGG-GRFSSLIFGTNLTDVVIIGGNGT 119
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
I+GQG +WW +F + KL TRPYL+E M++D +QIS+LTL++SPSWNVHPVY S++++QG
Sbjct: 120 INGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQG 179
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+TI+APV PNTDGINPDSC N +IEDCYIVSGDDC+AVKSGWD+YGI YG+PT+ +VIR
Sbjct: 180 MTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIR 239
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
RLTCISP SA IALGSEMSGGI++VRAEDI AIN++SGVRIKT VGRGGYV+DIY R MT
Sbjct: 240 RLTCISPDSAVIALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMT 299
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
M TMK+ FWMT +YGSH D+ +D KA+P I+ INYR++VA+NV+ +ARL+GI+GD FTGI
Sbjct: 300 MKTMKYVFWMTSDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGI 359
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL-PDQGPEKIRACDFPTESLPID 530
CI++ TI + K K++ W C ++ G+TS VTP C+LL P +GP + C FP LPI+
Sbjct: 360 CISDVTIRLTQKPKQLQWNCTNVEGVTSQVTPQSCDLLPPSKGPLQ---CTFPENQLPIE 416
Query: 531 MVEMKKCTY 539
V++K C+Y
Sbjct: 417 AVKLKTCSY 425
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 293/499 (58%), Positives = 374/499 (74%), Gaps = 9/499 (1%)
Query: 51 TKQHSKITYLIT-TMELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFE--- 106
+K S I +++ T S ++ R Q L L +V +L A +R+ + E
Sbjct: 3 SKSASAINIMLSDTTTTSSLNIYREQQQILCSLFVVFLVLGAPAAAARRHAPAAAGEQSA 62
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA--QLYVPAGKWLTG 164
Y A +CR H+AS+ +FGGVGDG TSNT AF+ A+ LSQYS DGG LYVPAG+WLT
Sbjct: 63 YLAPACREHTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTA 122
Query: 165 SFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI 224
FNL SHFTL+LH DA +LASQ+++EWPVI PLPSYGRGRD A GRYTSLI G+NLTDV+
Sbjct: 123 PFNLTSHFTLFLHSDAVILASQNISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVV 182
Query: 225 VTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
+TG+NGTIDGQGA WW ++ GKLKYTR YL+E M +D I IS++TLLNSP+WN+HPVYS
Sbjct: 183 ITGNNGTIDGQGATWWSKYKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYS 242
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
NI++QG+TI+AP SPNTDGINPDSC+ RIEDCY+VSGDDCVA+KSGWDEYGIA G+P
Sbjct: 243 KNIVIQGVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIP 302
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
T+ +++RRLTC+SP SA +A+GSEMSGG++DVR ED+ A++TES VRIKTAVGRG YVKD
Sbjct: 303 TEHVIVRRLTCVSPTSALVAIGSEMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKD 362
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV-SMAARLEGI 463
IY R MT+ MK FWMTG+Y SH D+ YD A+PV++G++++D+ A V AAR+EGI
Sbjct: 363 IYARRMTLTGMKRVFWMTGDYKSHPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGI 422
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC-ELLPDQGPEKIRACDF 522
SG PF GIC+AN T+ M K +KV W CAD+ G+++GVTP PC +L Q C F
Sbjct: 423 SGAPFKGICMANVTMEM-TKPRKVMWNCADVEGVSTGVTPAPCGQLQQKQDGAGGSDCPF 481
Query: 523 PTESLPIDMVEMKKCTYRI 541
PT+ L +D V +++CTY +
Sbjct: 482 PTDKLAVDEVTVQQCTYSL 500
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 279/434 (64%), Positives = 346/434 (79%), Gaps = 6/434 (1%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
Y ++CR HSA IT+FG GDGKT NTKAFK A+N LS+ + DGGAQL VP G+WLTGSF
Sbjct: 1 YRGLNCRKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSF 60
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+LISHFTLYLH+ A LLASQD E+P+++PLPSYG+GRDA AGR+ SLIFGTNLTDV++T
Sbjct: 61 SLISHFTLYLHQGAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVIT 120
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G NGTIDGQG WW+++ +L TRPY++E MY++ +QIS+LTLLNSP+WNVHPVY +
Sbjct: 121 GANGTIDGQGESWWKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRD 180
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
++++G+TI+AP SPNTDGI+PDSC+N RIE YIVSGDDC+A+KSGWDEYGI + MPT+
Sbjct: 181 VIIRGLTILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQ 240
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+VIR LTCISP SATIALGSEMSGGIQ+VRAE I AI+TESG+R+KT+ GRG +V++IY
Sbjct: 241 DVVIRHLTCISPTSATIALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIY 300
Query: 407 VRGMTMHTMKWAFWMTGNYGS---HADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
VR MTM TMK+ FWMTG Y S H D HY+P+ALPVI+GINY D+VA NVSM LEGI
Sbjct: 301 VRKMTMKTMKYVFWMTGYYSSSRVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGI 360
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
D F GIC++N TIG+A K K++ W C +I G+ SGVTP PC L + K C FP
Sbjct: 361 KEDVFKGICLSNVTIGLAKKPKEMLWNCTNIEGVASGVTPQPCGFLRES---KAMGCPFP 417
Query: 524 TESLPIDMVEMKKC 537
+ LPI+ V++K C
Sbjct: 418 EDRLPIEEVKLKVC 431
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/436 (64%), Positives = 342/436 (78%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
SF Y A SCRA S SI +FGGVGDG T NT+AF+ AI LS++S GG QLY+P G+WLT
Sbjct: 33 SFSYVAPSCRAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLT 92
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
GSFNL HFTLYLHK+A +L SQDL +WP+I PLPSYG GRDA RY+SLI G NLTDV
Sbjct: 93 GSFNLTDHFTLYLHKEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSSLINGYNLTDV 152
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
++TGDNGTIDGQGA+WWQ+FHK LK TR YL+E MY+ +I IS+LT LNSP+WN+HPVY
Sbjct: 153 VITGDNGTIDGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVY 212
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
SSNIL+Q +TI+AP+ SPNTDGI+PDSC+ RIEDCY+VSGDD VA+KSGWDEYGI++GM
Sbjct: 213 SSNILIQYVTILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGM 272
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
P++ +VIRRL ISP SA IALGSEMSGGIQDVRAEDI+AIN+E+G+RIKT+ GRGG+VK
Sbjct: 273 PSQHIVIRRLVGISPTSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVK 332
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
DI+V MTM MKWAF MTG+YGSH DN YDP ALP ++ I+Y +IVA NVS+A +L+GI
Sbjct: 333 DIFVNRMTMVNMKWAFTMTGSYGSHPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGI 392
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
+ PF IC+ N TI MAAK KK PW C I G+++ V P PC LL ++ E C P
Sbjct: 393 ANAPFKDICLTNVTITMAAKSKKYPWNCTYIHGLSNAVYPQPCSLLEERPAEGDAFCPSP 452
Query: 524 TESLPIDMVEMKKCTY 539
E + ++ C+Y
Sbjct: 453 QELDTTEENSLQHCSY 468
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/478 (58%), Positives = 362/478 (75%), Gaps = 5/478 (1%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESR--KARRLDSFEYNAISCRAHSASITD 121
ME S + +L+V+A+ S E+R ++ + EY A++CR H+A +T+
Sbjct: 1 MEFSINPSTLKMIRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTE 60
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG VGDGKTSNTKAFK+AI +L+ ++DGG QL VP GKWLTGSFNL SHFTL++ K A
Sbjct: 61 FGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGAT 120
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
+LASQD +E+PV+ PLPSYG+GRDAA + SLI GTNLTDV++TG+NGTI+GQG WW
Sbjct: 121 ILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWV 180
Query: 242 QFHKGKLK-YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
++ G K TRPY +E +++ N+QIS++T+++SP+WN+HPVY +N++V+G+TI+AP+ S
Sbjct: 181 KYRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDS 240
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTDGINPDSCTNT IEDCY+VSGDDC+AVKSGWD++GI GMPT+QL IRRLTCISP S
Sbjct: 241 PNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDS 300
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
A IALGSEMSGGI+DVR EDI + T+S +RIKTAVGRGGYVKDI+ R TM TMK+ FW
Sbjct: 301 AGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFW 360
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGM 480
M+G Y H + +DPKA+PVI INYRD+ ADNV+ ARL+G DPFT IC++N I +
Sbjct: 361 MSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDL 420
Query: 481 AAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
AA+ KK+ W C I G++S VTP PC LLP++G C FP + +PI+ V + KC+
Sbjct: 421 AAEPKKLLWNCTSISGVSSKVTPKPCSLLPEKGAP--VDCAFPVDKIPIESVVLNKCS 476
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/478 (58%), Positives = 361/478 (75%), Gaps = 5/478 (1%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRK--ARRLDSFEYNAISCRAHSASITD 121
ME S + +L+V+A+ S E+R + + EY A++CR H+A +T+
Sbjct: 1 MEFSINPSTLKMIRTSFCILVVLAISSFSMMEARDLGCKGKTNIEYMALNCRKHTAVLTE 60
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG VGDGKTSNTKAFK+AI +L+ ++DGG QL VP GKWLTGSFNL SHFTL++ K A
Sbjct: 61 FGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTLFIQKGAT 120
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
+LASQD +E+PV+ PLPSYG+GRDAA + SLI GTNLTDV++TG+NGTI+GQG WW
Sbjct: 121 ILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWV 180
Query: 242 QFHKGKLK-YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
++ G K TRPY +E M++ N+QIS++T+++SP+WN+HPVY +N++V+G+TI+AP+ S
Sbjct: 181 KYRSGGFKNITRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDS 240
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTDGINPDSCTNT IEDCY+VSGDDC+AVKSGWD++GI GMPTKQL IRRLTCISP S
Sbjct: 241 PNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDS 300
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
A IALGSEMSGGI+DVR EDI + T+S +RIKTAVGRGGYVKDI+ R TM TMK+ FW
Sbjct: 301 AGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFW 360
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGM 480
M+G Y H + +DPKA+P I INYRD+ ADNV+ ARL+G DPFT IC++N I +
Sbjct: 361 MSGAYNQHPASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDL 420
Query: 481 AAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
AA+ KK+ W C +I G++S VTP PC LLP++G C FP + +PI+ V + KC+
Sbjct: 421 AAEPKKLLWNCTNISGVSSKVTPKPCSLLPEKGAP--VDCAFPVDKIPIESVVLNKCS 476
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/478 (58%), Positives = 362/478 (75%), Gaps = 5/478 (1%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESR--KARRLDSFEYNAISCRAHSASITD 121
ME S + +L+V+A+ S E+R ++ + EY A++CR H+A +T+
Sbjct: 1 MEFSINPSTLKMIRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTE 60
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG VGDGKTSNTKAFK+AI +L+ ++DGG QL VP GKWLTGSFNL SHFTL++ K A
Sbjct: 61 FGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGAT 120
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
+LASQD +E+PV+ PLPSYG+GRDAA + SLI GTNLTDV++TG+NGTI+GQG WW
Sbjct: 121 ILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWV 180
Query: 242 QFHKGKLK-YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
++ G K TRPY +E +++ N+QIS++T+++SP+WN+HPVY +N++V+G+TI+AP+ S
Sbjct: 181 KYRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDS 240
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTDGINPDSCTNT IEDCY+VSGDDC+AVKSGWD++GI GMPT+QL IRRLTCISP S
Sbjct: 241 PNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDS 300
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
A IALGSEMSGGI+DVR EDI + T+S +RIKTAVGRGGYVKDI+ R TM TMK+ FW
Sbjct: 301 AGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFW 360
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGM 480
M+G Y H + +DPKA+PVI INYRD+ ADNV+ ARL+G DPFT IC++N I +
Sbjct: 361 MSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDL 420
Query: 481 AAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
AA+ KK+ W C I G++S VTP PC LLP++G C FP + +PI+ V + KC+
Sbjct: 421 AAEPKKLLWNCTSISGVSSKVTPKPCSLLPEKGAP--VDCAFPVDKIPIESVVLNKCS 476
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/463 (61%), Positives = 355/463 (76%), Gaps = 7/463 (1%)
Query: 80 VPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDA 139
V LL+ +S R +A Y A +CR H+AS+TDFGGVGDG TSNT AF+ A
Sbjct: 11 VLLLLATTAVSARRHAPPQAGPAGQSTYMAPNCREHTASLTDFGGVGDGNTSNTAAFRKA 70
Query: 140 INQLSQYSSDGGA--QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL 197
+ LSQYS +GG LYVPAG+WLT FNL SHFTL+LH DA +L +QD+ +WPVI PL
Sbjct: 71 VEHLSQYSGEGGGGGMLYVPAGRWLTAPFNLTSHFTLFLHADAVILGTQDVAQWPVIDPL 130
Query: 198 PSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLME 257
PSYGRGRD A GRY SL+ G+NLTDV++TG+NGTIDGQGA WW ++ GKLKYTR YL+E
Sbjct: 131 PSYGRGRDHAGGRYASLVSGSNLTDVVITGNNGTIDGQGATWWSKYKSGKLKYTRGYLIE 190
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
M+TD + IS++TL+NSP+WN+HPVYS NI+V G+TI+APV SPNTDGINPDSC+ RIE
Sbjct: 191 LMHTDGVFISNVTLVNSPAWNIHPVYSRNIVVSGVTILAPVKSPNTDGINPDSCSQVRIE 250
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
DCY+VSGDDCVA+KSGWDEYGIA GMP++ + +RRLTC+SP SA IALGSEMSGGI+DVR
Sbjct: 251 DCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAVIALGSEMSGGIRDVR 310
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA 437
AEDI AI TES VRIKTAVGRG YV+D+Y R M + MK FWMTG+Y SH D+ YD A
Sbjct: 311 AEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMTGDYKSHPDDGYDKAA 370
Query: 438 LPVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGG 496
+PV++ I+Y+D+VA V AAR++GI G PF GIC+AN T+ M K +KV W CAD+ G
Sbjct: 371 VPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVTMEM-TKERKVSWNCADVEG 429
Query: 497 MTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTY 539
+++GVTP PC P QG AC FPT++L +D + +++C+Y
Sbjct: 430 VSAGVTPAPCA--PLQGTHG-GACPFPTDTLAVDQITVQQCSY 469
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 275/460 (59%), Positives = 358/460 (77%), Gaps = 5/460 (1%)
Query: 82 LLIVVALLSQRGAESR--KARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDA 139
+L+V+A+ S E+R ++ + EY A++CR H+A +T+FG VGDGKTSNTKAFK+A
Sbjct: 8 ILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEA 67
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
I +L+ ++DGG QL VP GKWLTGSFNL SHFTL++ K A +LASQD +E+PV+ PLPS
Sbjct: 68 ITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPS 127
Query: 200 YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLK-YTRPYLMEF 258
YG+GRDAA + SLI GTNLTDV++TG+NGTI+GQG WW ++ G K TRPY +E
Sbjct: 128 YGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEI 187
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+++ N+QIS++T+++SP+WN+HPVY +N++V+G+TI+AP+ SPNTDGINPDSCTNT IED
Sbjct: 188 IFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIED 247
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
CY+VSGDDC+AVKSGWD++GI GMPT+QL IRRLTCISP SA IALGSEMSGGI+DVR
Sbjct: 248 CYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRI 307
Query: 379 EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
EDI + T+S +RIKTAVGRGGYVKDI+ R TM TMK+ FWM+G Y H + +DPKA+
Sbjct: 308 EDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAM 367
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PVI INYRD+ ADNV+ ARL+G DPFT IC++N I +AA+ KK+ W C I G++
Sbjct: 368 PVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVS 427
Query: 499 SGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
S VTP PC LLP++G C FP + +PI+ V + KC+
Sbjct: 428 SKVTPKPCSLLPEKGAP--VDCAFPVDKIPIESVVLNKCS 465
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 263/349 (75%), Positives = 312/349 (89%)
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLK 249
E+P+I+PLPSYGRGRDA R++SLIFG NLTDV++TG NGTIDGQG LWW +F G+L
Sbjct: 3 EYPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELN 62
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
+TRPYL+E M++ NIQIS+LTL+NSPSWNVHPVY SN++VQG+TI+APV SPNTDGINPD
Sbjct: 63 HTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPD 122
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
SCTNT+I+DCYIVSGDDCVAVKSGWDEYGIA+GMPTKQ+VIRRLTCISP SA IALGSEM
Sbjct: 123 SCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEM 182
Query: 370 SGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
SGGI+DVRAEDI AI++ESGVRIKTAVGRGGYVKDIYVRGMT+ TMKW FWMTGNYGSH
Sbjct: 183 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 242
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
DN+YDP A+PVIQ INYRD+VA+NV+MAARLEGI+GDPFTGICI+N TIG+A KK+ W
Sbjct: 243 DNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQW 302
Query: 490 TCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCT 538
C+D+ G+TS VTP PC+LL DQGP KI AC++P ++LPI+ +E++ C+
Sbjct: 303 NCSDVAGITSEVTPKPCDLLSDQGPGKIGACNYPEDNLPIENMEVQTCS 351
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/429 (62%), Positives = 333/429 (77%), Gaps = 5/429 (1%)
Query: 112 CRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGG-AQLYVPAGKWLTGSFNLIS 170
CR H IT++G VGDGKT NT AF A+ LS+ ++DGG A L VP GKWLTG FNL S
Sbjct: 38 CRKHVKRITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALVVPEGKWLTGPFNLTS 97
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
HFTL+LH+ A +LASQDLN+WP+I PLPSYGRGRD RY++ I G+NLTDVI+TG NG
Sbjct: 98 HFTLFLHRGAEILASQDLNDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGQNG 157
Query: 231 TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
TI+GQG +WW ++H +L YTR YL+E +Y+ +I IS++T +++PSWN+HP Y +N+ +
Sbjct: 158 TINGQGQVWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTIS 217
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
G+TI+APV SPNTDGI+PDS + +IEDCYIVSGDDC+AVKSGWDEYGI + MP++ +V+
Sbjct: 218 GVTILAPVHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVV 277
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
RRLTCISP SA IALGSEMSGGIQDVRAED AINTES VRIK+ VGRGG+VKD++VRG+
Sbjct: 278 RRLTCISPTSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGL 337
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
++HTMKW FWMTGNYG H DN +PKALP + GINYRD+ A+NV+MA R+EGI DP+TG
Sbjct: 338 SLHTMKWVFWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTG 397
Query: 471 ICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPID 530
IC++N T +A KK+ W C D+ G+ SGV+P PC L G + C FP E L I
Sbjct: 398 ICMSNVTAQLAPDAKKLQWNCTDVKGVASGVSPKPCPELGAVG----KPCTFPEEELVIG 453
Query: 531 MVEMKKCTY 539
E+ KCTY
Sbjct: 454 PPELPKCTY 462
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 257/433 (59%), Positives = 329/433 (75%), Gaps = 4/433 (0%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
Y CR H A +T++G VGDG+T NT AF A+ L++ + DGGA L VP GKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S FTLYL + A +LASQD+ WP+I PLPSYGRGRD RY++ I G+NLTDVI+T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G NGTI+GQG +WW +FH +LK+TR +L+E +Y+DNI IS++T +++P WN+HP Y +N
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTN 214
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + G+TI+APV SPNTDGI+PDS + +IEDCYIVSGDDCVAVKSGWDEYGI + MP++
Sbjct: 215 VTISGVTILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQ 274
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+VIRRLTC+SP SA IALGSEMSGGI+DVRAED AINTES VR+K+ GRGG+V+DI+
Sbjct: 275 HIVIRRLTCVSPTSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIF 334
Query: 407 VRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
VRG+++HTMKW FWMTGNYG H DN DP A+P + GINY D+ A+NV+MA R+EGI D
Sbjct: 335 VRGLSLHTMKWVFWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKD 394
Query: 467 PFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTES 526
P+TGICI+N T +A K++ W C ++ G+TS V+P PC L +G + C FP E
Sbjct: 395 PYTGICISNVTARLAPDAKELQWNCTNVKGVTSHVSPKPCPELAAEG----KPCAFPEEE 450
Query: 527 LPIDMVEMKKCTY 539
L I E+ KC+Y
Sbjct: 451 LVIGPPELPKCSY 463
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 259/428 (60%), Positives = 326/428 (76%), Gaps = 4/428 (0%)
Query: 112 CRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISH 171
CR H A IT++GGVGDG+ SNT AF A+ LS + DGGA L VP GKWLTG FNL SH
Sbjct: 35 CRKHVARITEYGGVGDGRRSNTAAFAKAVADLSLRAGDGGAALVVPKGKWLTGPFNLTSH 94
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
FTL+L A +LASQ+L +WP+I PLPSYGRGRD RY++ I G+NLTDVI+TG NGT
Sbjct: 95 FTLFLDHGAEILASQNLEDWPLIAPLPSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGT 154
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
I+GQG +WW +FH +L YTR YL+E +Y++NI IS++T ++SPSWN+HP Y +N+ + G
Sbjct: 155 INGQGQVWWDKFHAKELTYTRGYLLELLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISG 214
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
ITI+AP+ SPNTDGI+PDS ++ +IED YIVSGDDC+AVKSGWD+YGI + MP++ ++IR
Sbjct: 215 ITILAPLNSPNTDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIR 274
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
RLTCISP SA IALGSEMSGGI+DVRA D AI+TES VRIK+ VGRGGYVKD++VRG++
Sbjct: 275 RLTCISPTSAMIALGSEMSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLS 334
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+HTMKW FWMTGNYG H DN DP ALP + GINY D+ A+NV+MA R+EGI DP+TGI
Sbjct: 335 LHTMKWVFWMTGNYGQHPDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGI 394
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDM 531
C++N T +A KK+ W C D+ G+ S V+P PC L G + C FP E L I
Sbjct: 395 CMSNVTAQLAPDAKKLQWNCTDVKGVASDVSPVPCPELGAAG----KPCAFPEEELVIGP 450
Query: 532 VEMKKCTY 539
E+ C+Y
Sbjct: 451 PELPTCSY 458
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 255/427 (59%), Positives = 323/427 (75%), Gaps = 4/427 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R H A +T++G VGDG+T NT AF A+ LS + DGGA L VP GKWLTG FNL S F
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL + A +LASQD+N WP+I PLPSYGRGRD RY + I G+NLTDVI+TG NGTI
Sbjct: 101 TLYLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTI 160
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
+GQG +WW +FH +LK TR +L+E +++DNI IS++T +++P WN+HP Y +N+ + G+
Sbjct: 161 NGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDGI+PDS T+ +IEDCYIVSGDDCVAVKSGWDEYGI + MP++ +VIRR
Sbjct: 221 TILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRR 280
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
LTCISP SA IALGSEMSGGI+DVRAED AINTES VRIK+ GRGG+VKDI+VRG+++
Sbjct: 281 LTCISPTSAMIALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSL 340
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
HTMKW FWMTGNYG H DN +P A+P + GINY D+ A+NV+ A R+EGI DP+TGIC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGIC 400
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMV 532
I+N T +A ++ W C ++ G+TS V+P PC L +G + C FP E L I
Sbjct: 401 ISNVTASLAPNATELQWNCTNVKGVTSNVSPKPCPELGAEG----KPCAFPVEELVIGPP 456
Query: 533 EMKKCTY 539
+ KC+Y
Sbjct: 457 ALPKCSY 463
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 345/453 (76%), Gaps = 11/453 (2%)
Query: 87 ALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQY 146
LLS R E + AR + S EY AI+CR HSA + +FG GDGKTSNTKAFK AI+ LS++
Sbjct: 12 GLLSVRVGECQTARTMASVEYPAINCRNHSAVVMEFGAAGDGKTSNTKAFKSAIDHLSKF 71
Query: 147 SSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDA 206
+ GGA L VP GKWLTGSFNL SHFTLY+HKDA +L SQD +++P++K LPSYG
Sbjct: 72 ADVGGAHLIVPPGKWLTGSFNLTSHFTLYIHKDAIILGSQDESDYPIVKALPSYG----G 127
Query: 207 AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQI 266
AGR++SLI GTNLTDV++TG NGT +GQG WW +FH+ +L TRP L+E +++ +QI
Sbjct: 128 TAGRFSSLILGTNLTDVVITGGNGTTNGQGKPWWDKFHEKRLNATRPNLIEIVFSYQVQI 187
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+ TL++SPSWNVHP+YS N+++QG+TIIAPVT PNTDGINPDSCTN R+EDCYIVSGDD
Sbjct: 188 TX-TLIDSPSWNVHPIYSRNVIIQGLTIIAPVTVPNTDGINPDSCTNIRVEDCYIVSGDD 246
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
+AVKS +E G+ GMPT+ L+IRRLTCISP+SA IALG EM+G + +VRAEDI AI+
Sbjct: 247 SIAVKSALNENGVKCGMPTEGLIIRRLTCISPHSAVIALGREMAGXM-NVRAEDITAIDX 305
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
+ G+RIKT + RGGYVKDIYVR MTM TM++AFW+ G+YG ++ PVI+GINY
Sbjct: 306 QFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPPAPGHEG---PVIEGINY 362
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
RD+VADNV+ A+L GISG PFTG CI+N TIG+ + +K W C ++ G+TS VTP PC
Sbjct: 363 RDMVADNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPC 422
Query: 507 ELLPDQGPEKIRACDFPTESLPIDMVEMKKCTY 539
+LL ++I C FP + LPI+ V+++ C+Y
Sbjct: 423 DLLSPS--KEILNCPFPKDLLPIEDVKLRICSY 453
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/480 (51%), Positives = 320/480 (66%), Gaps = 40/480 (8%)
Query: 66 LSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNA-----ISCRAHSASIT 120
L+ + R ++ L+ V +S AESR + + YNA I+CR H+A +T
Sbjct: 2 LAFLESGRYHYLEIFTALVFVGSISVGIAESRNVQIFNKDSYNAVNYAAINCRKHTAFLT 61
Query: 121 DFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDA 180
DFGGVGDGKT NTKAF+ AI LSQY+ DGGA+L VPAGKWLTGSFNL SHFTL+LH+ A
Sbjct: 62 DFGGVGDGKTLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHFTLFLHRGA 121
Query: 181 FLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW 240
+LASQ+ ++P+I LPS+G +D GR++SLI G NLTDV++TG+NGTIDGQGA WW
Sbjct: 122 TILASQNEADFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTIDGQGAPWW 181
Query: 241 QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+F KG K +RP L++ MYTD +QIS++TL+NSPSW+VHPVY SN+LVQG+TIIAPV
Sbjct: 182 DKFEKGLFKASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGVTIIAPVEV 241
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTDGINP + S + +Y IS
Sbjct: 242 PNTDGINPSRF------------------LASSFHQY-------------LNFPLISTSD 270
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
A IALGSEMSGGI++VR EDI A ++S VRIKTA GRGGYVKDI+VR MT+ TMK+ FW
Sbjct: 271 AGIALGSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFW 330
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGM 480
++GNY +H D+ +DP AL I+ INYRDIVA NV+M+ +G + FTGIC++N TI +
Sbjct: 331 ISGNYKTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQL 390
Query: 481 AAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
+ KK W C+++ G++S VTP PC L PEK C FP + LPI+ + +K CT +
Sbjct: 391 SQTPKKPQWNCSNVEGVSSHVTPTPCSLF----PEKPVDCTFPEDKLPIESIHLKTCTAK 446
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 221/371 (59%), Positives = 286/371 (77%), Gaps = 9/371 (2%)
Query: 174 LYLH--KDAFLLASQ---DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
L+LH +D L ++ DL +WP+I PLPSYGRGRD RY++ I G+NLTDVI++G+
Sbjct: 12 LWLHSPRDLTSLTNRPVLDLEDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIISGN 71
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
NGTI+GQG +WW +FH +L YTR YL+E +Y+ +I IS++T +++PSWN+HP Y +N+
Sbjct: 72 NGTINGQGQVWWDKFHAKELDYTRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVT 131
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
+ G+TI+APV SPNTDGI+PDS ++ +IEDCYIVSGDDC+AVKSGWDEYGI + MP++ +
Sbjct: 132 ISGVTILAPVHSPNTDGIDPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHI 191
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
V+RRLTCISP SA IALGSEMSGGIQDVR ED AINTES VRIK+ VGRGG+V+D++VR
Sbjct: 192 VVRRLTCISPTSAMIALGSEMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVR 251
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+++HTMKW FWMTGNYG H DN DPKALP + GINYRD+ A+NV+MA R+EGI DP+
Sbjct: 252 RLSLHTMKWVFWMTGNYGQHPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPY 311
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLP 528
TGIC++N T +A K KK+ W C D+ G+ GV+P PC L +G + C FP E L
Sbjct: 312 TGICMSNVTAQLAPKAKKLQWNCTDVQGVAYGVSPEPCPELGAEG----KPCTFPDEELV 367
Query: 529 IDMVEMKKCTY 539
I E+ KCTY
Sbjct: 368 IGPPELPKCTY 378
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 293/406 (72%), Gaps = 4/406 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SIT+FG V DG T NTKAFK+AI LS ++ GGA+L+VPAG+WLTGSFNLISH
Sbjct: 69 RPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHL 128
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
T+ L DA ++ SQD ++WPVI PLPSYGRGR+ R+ SLIFG+NLTDVI+TG NGTI
Sbjct: 129 TVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTI 188
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG LWW FH L YTRP L+E MY+D + IS+LT +N+P WN+HPVY S +LVQ +
Sbjct: 189 DGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHL 248
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP++SPNTDGI+PDS +N IEDCYI +GDD V +KSGWDEYGI++ P+ + IR
Sbjct: 249 TILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 308
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + SA IA GSEMSGGI DVRAE ++ IN+ G+RIKTA GRGGYVK+IY+ ++M
Sbjct: 309 ITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSM 368
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D++YD ALPVI I +++V N+ A L GI GD F+ IC
Sbjct: 369 DNVSIAIRITGNYGEHPDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNIC 428
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL-PDQGPEKI 517
++N ++ + PW C+ I G ++ V P CE L P GP ++
Sbjct: 429 LSNVSL---SSKSADPWNCSLIEGFSNSVAPEICEQLRPSPGPGQV 471
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/406 (55%), Positives = 292/406 (71%), Gaps = 4/406 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SIT+FG V DG T NTKAFK+AI LS ++ GGA+L+VPAG+WLTGSFNLISH
Sbjct: 69 RPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHL 128
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
T+ L DA ++ SQD ++WPVI PLPSYGRGR+ R+ SLIFG+NLTDVI+TG NGTI
Sbjct: 129 TVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTI 188
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG LWW FH L YTRP L+E MY+D + IS+LT +N+P WN+HPVY S +LVQ +
Sbjct: 189 DGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHL 248
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP++SPNTDGI+PDS +N IEDCYI +GDD V +KSGWDEYGI++ P+ + IR
Sbjct: 249 TILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 308
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + SA IA GSEMSGGI DVRAE ++ IN+ G+RIKTA GRGGYVK+IY+ ++M
Sbjct: 309 ITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSM 368
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D++YD LPVI I +++V N+ A L GI GD F+ IC
Sbjct: 369 DNVSIAIRITGNYGEHPDDNYDKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNIC 428
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL-PDQGPEKI 517
++N ++ + PW C+ + G ++ V P CE L P GP ++
Sbjct: 429 LSNVSL---SSKSADPWNCSLVKGFSNSVAPEICEQLRPSPGPGQV 471
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/450 (51%), Positives = 309/450 (68%), Gaps = 9/450 (2%)
Query: 69 MSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDG 128
MSR S L+ V A + + L + Y R HS SIT+FG VGDG
Sbjct: 1 MSRSASIFQALLVFTTVAAEIQWSSVSGMYCKDLTASVY-----RPHSVSITEFGAVGDG 55
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
T NTKAF++AI LS +++ GGAQL+VPAG+WLTGSF+L+SH T+ L KDA +L S D
Sbjct: 56 MTRNTKAFQNAIFYLSSFANKGGAQLFVPAGRWLTGSFSLVSHLTVSLDKDAVILGSPDS 115
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL 248
++WPVI PLPSYGRGR+ R+ SLIFG+NLTDVI+TG NGTIDGQG +WW FH L
Sbjct: 116 SDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGEIWWNWFHNHTL 175
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
YTRP L+EFMY+ + +S+LT NSP WN+HPVY S +LVQ +TI+AP++SPNTDGI+P
Sbjct: 176 NYTRPPLVEFMYSTRVVVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDP 235
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
DS TN IEDCYI +GDD V +KSGWDEYGI++ P+ + I+ +T + SA IALGSE
Sbjct: 236 DSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSE 295
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
MSGGI +VRA I+ +N+ G+RIKTA GRGGYVK++Y+ ++M + A +T NYG H
Sbjct: 296 MSGGISNVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEH 355
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
D+ YD ALP+I I ++++ N+ +A L+GI GD F+ IC++N T+ + P
Sbjct: 356 PDDKYDKNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTLSTKSMD---P 412
Query: 489 WTCADIGGMTSGVTPPPC-ELLPDQGPEKI 517
W C+ + G ++ V+P C EL + GP+++
Sbjct: 413 WNCSLVEGYSNSVSPEICEELRTNPGPDQV 442
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/409 (54%), Positives = 293/409 (71%), Gaps = 4/409 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R H AS+TDFG VGDG T NTKAF++A+ L ++ GGAQL+VPAG+WLTGSF+LISH
Sbjct: 49 RPHRASVTDFGAVGDGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISHL 108
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA +L S D ++WPVI LPSYGRGR+ R+ SLIFG+NLTDVI+TG NGT+
Sbjct: 109 TLSLDKDAVILGSPDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTV 168
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW FH L YTRP L+E MY+ + IS+LT +NSP WN+HPVY S +LVQ +
Sbjct: 169 DGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHL 228
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP++SPNTDGI+PDS TN IEDCY+ +GDD + +KSGWDEYGI++ P+ + IR
Sbjct: 229 TILAPISSPNTDGIDPDSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRN 288
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + SA +A GSEMSGGI DVRAE ++ +N+ G+RIKTA GRGGYVK++YV ++
Sbjct: 289 ITGQTRNSAGLAFGSEMSGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSF 348
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D+ YD ALP I I +D+V N+ +A L+GI GD F+GIC
Sbjct: 349 DNVSIAIRITGNYGEHPDDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGIC 408
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE-LLPDQGPEKIRAC 520
++N ++ + + PW C+ + G +S V+P CE L GP + C
Sbjct: 409 LSNVSLSVRSTD---PWNCSLVEGYSSSVSPEVCEQLRATPGPGSGQMC 454
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/406 (55%), Positives = 293/406 (72%), Gaps = 4/406 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HSASITDFG VGDG T NTKAF++A+ L+ ++ GGAQL+VPAG+WLTGSF+LISH
Sbjct: 56 RPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLTGSFSLISHL 115
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA +L S D ++WPVI LPSYGRGR+ R+ SLIFG+NLTDVI+TG NGTI
Sbjct: 116 TLSLDKDAVILGSTDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGSNGTI 175
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW FH L YTRP L+E MY+ + IS+LT +NSP WN+HPVY S +L Q +
Sbjct: 176 DGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLAQHL 235
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP++SPNTDGI+PDS TN IEDCYI +GDD V +KSGWDEYGI++ P+ + IR
Sbjct: 236 TILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 295
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + SA +A GSEMSGGI DVRAE I+ +N+ G+RIKTA GRGGYVK++YV ++
Sbjct: 296 ITGQTRNSAGLAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSF 355
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D+ Y+ ALP I I +D+V N+ +A L+GI GD F+ IC
Sbjct: 356 DNVSIAIRITGNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNIC 415
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE-LLPDQGPEKI 517
++N ++ + + PW C+ + G ++ V+P CE L GP +I
Sbjct: 416 LSNVSLSVRSTD---PWNCSLVEGYSNSVSPEVCEQLRTSPGPGQI 458
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/400 (54%), Positives = 294/400 (73%), Gaps = 3/400 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSF+LISH
Sbjct: 39 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L KDA +L S + N+WPVI PLPSYGRGR+ R+ SLI+G NLTDVIVTGDNGTI
Sbjct: 99 TLWLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTDVIVTGDNGTI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW F K L YTRP+L+EF+ + + IS++T LNSP W +HPVY S +++Q +
Sbjct: 159 DGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPVYCSQVIIQNV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDGI+PDS + IEDCYI +GDD +A+KSGWDEYGI+Y P+ ++IRR
Sbjct: 219 TILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRR 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
L + SA IA+GSEMSGG+ +V AE ++ N+++G+RIKT+ GRGGYV++IY+ M +
Sbjct: 279 LVGKTNSSAGIAIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNL 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+K A TG YG H D YDP ALP+I+ I +D++ +N+ A LEGI GD F IC
Sbjct: 339 VDVKIAIRFTGQYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQ 512
++N T+ + ++ PW C+ I G + V+P CE L ++
Sbjct: 399 LSNITLNVTSES---PWNCSYIHGYSDLVSPEACEPLGER 435
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/445 (51%), Positives = 307/445 (68%), Gaps = 6/445 (1%)
Query: 77 TKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAF 136
+ LV + +V+AL + + E N R HS SIT+FG VGDG T NTKAF
Sbjct: 5 STLVDVFLVLALFCCSSWKVWSSTLCK--ETNLDKVRPHSVSITEFGAVGDGITLNTKAF 62
Query: 137 KDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP 196
++AI L+ +S GGA+L+VPAG+WLTGSF+LISH TL+L KDA +L S + +WPV+ P
Sbjct: 63 QNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAIILGSTNSEDWPVVDP 122
Query: 197 LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLM 256
LPSYGRGR+ GR+ SLI+G NLTDVI+TG+ G IDGQG++WW F L YTRP+L+
Sbjct: 123 LPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTLDYTRPHLV 182
Query: 257 EFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
E M + + IS+LT LNSP W +HPVY S + VQ +TI+AP+ SPNTDGI+PDS + I
Sbjct: 183 ELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCI 242
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
EDCYI +GDD +A+KSGWDEYGIA+G P+ +VI RL + SA IA+GSEMSGG+ DV
Sbjct: 243 EDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVSDV 302
Query: 377 RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
RAEDI ++ + +RIKT+ GRGGYV++IYV MT+ + A TG+YG H D+ YDP
Sbjct: 303 RAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPN 362
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGG 496
ALPVI+ I D++ +N++ A +EGI GD F IC++N T+ +++ + PW C++I G
Sbjct: 363 ALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLNVSSNY---PWNCSNIRG 419
Query: 497 MTSGVTPPPCELLPDQ-GPEKIRAC 520
+ V P CE L ++ P+ C
Sbjct: 420 YSDMVFPEACEPLKERIFPDHCSDC 444
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/440 (51%), Positives = 303/440 (68%), Gaps = 10/440 (2%)
Query: 72 LRSQVTKLVPLLIVVALLSQR--GAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGK 129
+R + LL+ A++ + G + + S Y R HS +IT+FG VGDG
Sbjct: 1 MRRSASVFRALLVFTAIVETQWPGVSGIYCKDMASGVY-----RPHSVTITEFGAVGDGV 55
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSF+LISH TL L KDA ++ S D +
Sbjct: 56 ALNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVIIGSPDSS 115
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLK 249
WPVI PLPSYGRGR+ R+ SLIFG NLTDVI+TG NGTIDGQGA+WW FH L
Sbjct: 116 NWPVIDPLPSYGRGRELPGERHQSLIFGYNLTDVIITGANGTIDGQGAVWWDWFHNHTLN 175
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
YTRP+L+E MY+ N+ IS+LT NSP WN+HPVY S +LV+ +TI+AP+ SPNTDGINPD
Sbjct: 176 YTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPLDSPNTDGINPD 235
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
S TN I+ CY+ +GDD + +KSGWDEYGI++ P+ + I +T + A IA+GSEM
Sbjct: 236 SSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSEM 295
Query: 370 SGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
SGGI +VRAE ++ +N+ G+RIKTA GRGGYV+++Y+ ++MH + A +TGNYG H
Sbjct: 296 SGGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHP 355
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
DN+YD ALP+I I ++V NV +A LEGI GD F+ ICI+N ++ + + H PW
Sbjct: 356 DNNYDRNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSLSVQSMH---PW 412
Query: 490 TCADIGGMTSGVTPPPCELL 509
C+ I G ++ V P C+ L
Sbjct: 413 NCSLIQGYSNSVIPESCDQL 432
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/437 (51%), Positives = 300/437 (68%), Gaps = 19/437 (4%)
Query: 108 NAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFN 167
N+ R HS +IT+FG VGDG T NTKAF++AI L+ +S GGA+L+VPAG+WLTGSF+
Sbjct: 44 NSADIRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFD 103
Query: 168 LISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
LISH TL+L K+A +L S + ++WPV+ LPSYGRGR+ GR+ SLI+G NLTDV++TG
Sbjct: 104 LISHLTLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTDVVITG 163
Query: 228 DNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
DNGTIDGQG++WW F L YTRP+L+E M + I IS+LT +NSP W +HPVY S +
Sbjct: 164 DNGTIDGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHPVYCSKV 223
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
+VQ +TI AP+ SPNTDGI+PDS + IEDC+I +GDD +A+KSGWDEYGI YG P +
Sbjct: 224 IVQNVTIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRN 283
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ IRRL + SA IA+GSEMSGG+ +V AE+I N+ +G+RIKT+ GRGGYV++IYV
Sbjct: 284 ITIRRLVGQTRSSAGIAIGSEMSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYV 343
Query: 408 RGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+T++ + A TGNYG H D HYDPKALP+I+ I ++ DN+ A L+GI D
Sbjct: 344 SNVTLNDVNIAIRFTGNYGEHPDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADS 403
Query: 468 FTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESL 527
F IC++N ++ + + K PW C+ I G + V+P CE L ES+
Sbjct: 404 FVNICLSNISLNVTS---KFPWNCSYIQGYSESVSPEICEPL--------------RESI 446
Query: 528 PIDMVEMKKCTYRINYL 544
P D C + NYL
Sbjct: 447 PPD--HYSNCYHLSNYL 461
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/452 (49%), Positives = 308/452 (68%), Gaps = 7/452 (1%)
Query: 77 TKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAF 136
+ LV +L+V AL + L + R HS SIT+FG VGDG T NTKAF
Sbjct: 5 STLVEVLLVFALFCSSPWTVWSSNTL--CQQTNEEVRPHSVSITEFGAVGDGVTLNTKAF 62
Query: 137 KDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP 196
++AI L+ ++ GGA+L+VPAG+WLTGSF+LISH TL+L KDA +L S + +WPV+ P
Sbjct: 63 QNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDP 122
Query: 197 LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLM 256
LPSYGRGR+ GR+ SLI+G NLTDVI+TG+NGTIDGQG++WW +F L YTRP+L+
Sbjct: 123 LPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDGQGSIWWNRFMNRTLDYTRPHLV 182
Query: 257 EFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
E M + + IS+LT LNSP W +HPVY S + VQ + I+AP SPNTDGI+PDS N I
Sbjct: 183 ELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDPDSSDNVCI 242
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
EDCYI +GDD +A+KSGWDEYGIAYG P+ ++I RL + S IA+GSEMSGG+ +V
Sbjct: 243 EDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGKTQTSG-IAIGSEMSGGVSEV 301
Query: 377 RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
AEDI+ ++ +G+RIKT+ GRGGYV++IYV +++ + A W TG+YG H D+ YDP
Sbjct: 302 HAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYGEHPDDAYDPN 361
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGG 496
ALPVI+ + +D+V +N+ A +EGI GD F IC++N + + + + PW C+ + G
Sbjct: 362 ALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVTSNY---PWNCSYVKG 418
Query: 497 MTSGVTPPPCELLPDQ-GPEKIRACDFPTESL 527
+ V P CE L ++ P+ C + T +
Sbjct: 419 YSDLVQPEACEPLKERIFPDHCSDCYYLTNQI 450
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/444 (50%), Positives = 303/444 (68%), Gaps = 19/444 (4%)
Query: 81 PLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAI 140
P I +LL ++G N R HS +IT+FG VGDG T NTKAF++AI
Sbjct: 21 PWAIKCSLLCEQG--------------NLAVIRPHSVTITEFGAVGDGVTLNTKAFQNAI 66
Query: 141 NQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
L+ ++ GGA+L+VP G+WLTGSF+LISH TL+L KDA +L S + ++WPVI PLPSY
Sbjct: 67 FYLNSFADKGGAKLFVPTGRWLTGSFDLISHLTLWLDKDAVILGSTNSDDWPVIDPLPSY 126
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMY 260
GRGR+ R+ SLI+G NLTDVI+TGDNGTIDGQG++WW F L YTRP+L+EFM
Sbjct: 127 GRGRELPGRRHKSLIYGRNLTDVIITGDNGTIDGQGSIWWDWFRNQTLNYTRPHLVEFMN 186
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
T + IS+LT +NSP W +HPVY S ++VQ +TI+AP+ SPNTDGI+PDS + +EDCY
Sbjct: 187 TTGVVISNLTFINSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDVCVEDCY 246
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+ +GDD +A+KSGWDEYG++YG P+K + IRRL + SA IA+GSEMSGG+ +V AE+
Sbjct: 247 VSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQTT-SAGIAIGSEMSGGVSEVHAEN 305
Query: 381 IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPV 440
++ N+ +G+RIKT+ GRGGYV++IY+ M++ +K A TG YG H D +YDP ALP+
Sbjct: 306 LRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTAISFTGRYGEHPDEYYDPTALPL 365
Query: 441 IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG 500
I+ I D+ NV A LEGI GD F IC+ N + + +K PW C+ I G +
Sbjct: 366 IERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNINLSVTSKS---PWNCSYIQGYSDT 422
Query: 501 VTPPPCELLPDQ-GPEKIRACDFP 523
V+P CE L ++ P+ C P
Sbjct: 423 VSPEICEPLRERIFPDHYSDCYSP 446
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/397 (54%), Positives = 284/397 (71%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG +GDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSFNLISH
Sbjct: 23 RPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFNLISHL 82
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA ++ S D + WPVI PLPSYGRGR+ R+ SLIFG NLTDVI+TG NG+I
Sbjct: 83 TLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQSLIFGLNLTDVIITGANGSI 142
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW F L YTRP+L+E MY+ N+ IS+LT NSP WN+HPVY S +LVQ +
Sbjct: 143 DGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHV 202
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDG++PDS TN I CY+ +GDD + +KSGWDEYGI++ P+ + I
Sbjct: 203 TILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISD 262
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + A IA GSEMSGGI +VRA ++ +N+ G+RIKTA GRGGYVK++Y+ ++M
Sbjct: 263 ITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSM 322
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D+ YD ALPVI I +D+V N+ +A LEGI GD F+ IC
Sbjct: 323 DNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 382
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N ++ + + H PW C+ I G ++ V P CE L
Sbjct: 383 LSNVSLSVQSAH---PWNCSLIEGYSNSVIPESCEQL 416
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/446 (49%), Positives = 308/446 (69%), Gaps = 7/446 (1%)
Query: 76 VTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKA 135
+ +LV + +V+AL S + + N + R HS SIT+FG VGDG T NTKA
Sbjct: 12 LLQLVDVFLVLALFSCSTWTVWSSSCCNQINLNEV--RPHSVSITEFGAVGDGITLNTKA 69
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
F++AI L+ ++ GGA+L+VPAG+WLTGSF+LISH TL+L DA +L S + ++WPV+
Sbjct: 70 FQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVD 129
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYL 255
PLPSYGRGR+ GR+ SLI+G NLTDV++TG+NGTIDGQG++WW F L YTRP+L
Sbjct: 130 PLPSYGRGRELPGGRHRSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHL 189
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
+E M + + IS++T LNSP W +HPVY S++ +Q +TIIAP++SPNTDGINPDS N
Sbjct: 190 VELMNSTGVLISNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVC 249
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
IEDCYI +GDD +++KSGWD YGI++G P+ + IRRL + SA IA+GSEMSGG+ +
Sbjct: 250 IEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTT-SAGIAIGSEMSGGVSE 308
Query: 376 VRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP 435
V AEDI ++ S +RIKT+ GRGGYV+++Y+ M + + A TG YG H D+ YDP
Sbjct: 309 VHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHPDDTYDP 368
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIG 495
ALPVI+ I +D++ V A ++GI GD F IC++N T+ +++ K+PW C+ I
Sbjct: 369 DALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLNVSS---KLPWNCSYIK 425
Query: 496 GMTSGVTPPPCELLPDQ-GPEKIRAC 520
G + V+P CE L ++ PE C
Sbjct: 426 GFSDLVSPEACEPLKERIFPEHCSDC 451
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/397 (54%), Positives = 283/397 (71%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSF+LISH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA ++ S D + WPVI PLPSYGRGRD R+ SLIFG NLTDVI+TG NG+I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW FH L YTRP+L+E MY+ N+ IS+LT NSP WN+HPVY S +LVQ +
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDG+ PDS TN I CY+ +G D + +KSGWDEYGI++ P+ + I
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + + IA GSEMSGGI +VRA ++ +N+ G+RIKTA GRGGYV+++Y+ ++M
Sbjct: 279 ITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSM 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D+ YD ALPVI I +D+V N+ +A LEGI GD F+ IC
Sbjct: 339 DNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N ++ + + H PW C+ I G ++ V P CE L
Sbjct: 399 LSNVSLSVQSAH---PWNCSLIEGYSNSVIPESCEQL 432
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 307/443 (69%), Gaps = 5/443 (1%)
Query: 82 LLIVVALLSQRGAESRKARRLDSFEYNAISC--RAHSASITDFGGVGDGKTSNTKAFKDA 139
LL V+ + S GA L EY++++ R HS SIT+FG VGDG T NTKAF++A
Sbjct: 7 LLYVLLVQSFYGAWCSVGGSLHC-EYSSLASLHRPHSVSITEFGAVGDGVTLNTKAFQNA 65
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
+ L+ +S GGA+L+VPAG+WLTGSF+LISH TL+L K A +L S WPV+ PLPS
Sbjct: 66 LFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTSSENWPVVDPLPS 125
Query: 200 YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFM 259
YGRGR+ R+ SLI+G NLTDV++TG+NGTIDGQG++WW F G+L YTRP+L+E M
Sbjct: 126 YGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGELNYTRPHLVELM 185
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ + IS+LT LNSP WN+HPVY +++V+ +TI+AP+ SPNTDG++PDS TN IEDC
Sbjct: 186 NSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDC 245
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
YIV+GDD V++KSGWDEYGI+Y P+ ++ I RLT + S+ IA+GSEMSGG+ ++ +
Sbjct: 246 YIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIK 305
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALP 439
D+ N+ +G+RIKT+ GRGGYV+++++ + + +K A TG YG H D +DPKALP
Sbjct: 306 DLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKFDPKALP 365
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTS 499
I+ I + ++ D + +A LEGI+GD F IC N T+ + KK PW C+++ G +
Sbjct: 366 AIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQ 425
Query: 500 GVTPP-PCELLPDQ-GPEKIRAC 520
V+P C+ L + PE C
Sbjct: 426 WVSPEITCDSLKESIFPEHQSDC 448
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 304/443 (68%), Gaps = 5/443 (1%)
Query: 82 LLIVVALLSQRGAESRKARRLDSFEYNAISC--RAHSASITDFGGVGDGKTSNTKAFKDA 139
LL V+ + + GA L EY+ ++ R HS SIT+FG VGDG T NTKAF++A
Sbjct: 7 LLYVLLVQAFYGAWCSVGESLHC-EYSNLASLHRPHSVSITEFGAVGDGVTLNTKAFQNA 65
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
+ L+ +S GGA+L+VPAG+WLTGSF+LISH TL+L K A +L S WPV+ PLPS
Sbjct: 66 LFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTSSENWPVVDPLPS 125
Query: 200 YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFM 259
YGRGR+ R+ SLI+G NLTDV++TG+NGTIDGQG +WW F G+L YTRP+L+E M
Sbjct: 126 YGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGELNYTRPHLVELM 185
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ + IS+LT LNSP WN+HPVY +++V+ +TI+AP+ SPNTDG++PDS TN IEDC
Sbjct: 186 NSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDC 245
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
YIV+GDD V++KSGWDEYGI+Y P+ ++ I RLT + S+ IA+GSEMSGG+ ++ +
Sbjct: 246 YIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIK 305
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALP 439
D+ N+ +G+RIKT+ GRGGYV+++++ + + +K A TG YG H D YDPKALP
Sbjct: 306 DLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALP 365
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTS 499
I+ I + ++ D + +A LEGI GD F IC N T+ + KK PW C+++ G +
Sbjct: 366 AIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQ 425
Query: 500 GVTPP-PCELLPDQ-GPEKIRAC 520
V+P C+ L + PE C
Sbjct: 426 WVSPEITCDSLKESIFPEHGSDC 448
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/397 (53%), Positives = 283/397 (71%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSF+LISH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA ++ S D + WPVI PLPSYGRGRD R+ SLIFG NLTDVI+TG NG+I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW FH L YTRP+L+E MY+ N+ IS+LT NSP WN+HPVY S +LV+ +
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDG+ PDS TN I CY+ +G D + +KSGWDEYGI++ P+ + I
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + + IA GSEMSGGI +VRA ++ +N+ G+RIKTA GRGGYV+++Y+ ++M
Sbjct: 279 ITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSM 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D+ YD ALPVI I +D+V N+ +A LEGI GD F+ IC
Sbjct: 339 DNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N ++ + + H PW C+ I G ++ V P CE L
Sbjct: 399 LSNVSLSVQSAH---PWNCSLIEGYSNSVIPESCEQL 432
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 304/440 (69%), Gaps = 10/440 (2%)
Query: 72 LRSQVTKLVPLLIVVALLSQR--GAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGK 129
+R + L LL+ + ++ + S + + S Y R HS +IT+FG VGDG
Sbjct: 1 MRRSASLLRVLLVFITMVGTQWSNVSSTYCKDMASSVY-----RPHSVTITEFGAVGDGV 55
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
T NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSF+LISH TL L KDA ++ S D +
Sbjct: 56 TLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAEIIGSPDSS 115
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLK 249
+WPVI PLPSYGRGR+ R+ SLIFGTNLTDVI+TG NGTIDGQGA+WW FH L
Sbjct: 116 DWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLN 175
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
YTRP+L+E MY+ ++ IS+LT NSP WN+HPVY S +LVQ +TI+AP+ SPNTDGI+PD
Sbjct: 176 YTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPD 235
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
S TN I+ CY+ +GDD + +KSGWDEYGI++ P+ + I +T + A IA GSEM
Sbjct: 236 SSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEM 295
Query: 370 SGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
SGGI +VRAE ++ +N+ G+RIKTA GRGGYVK++Y+ ++M + A +TGN+G H
Sbjct: 296 SGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHP 355
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
D+ YD ALP+I I ++V NV +A LEGI GD F+ IC++N ++ + + H PW
Sbjct: 356 DDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQSMH---PW 412
Query: 490 TCADIGGMTSGVTPPPCELL 509
C+ I G ++ V P CE L
Sbjct: 413 NCSLIEGYSNSVIPESCEQL 432
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/395 (53%), Positives = 282/395 (71%), Gaps = 3/395 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSF+LISH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA ++ S D + WPVI PLPSYGRGRD R+ SLIFG NLTDVI+TG NG+I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW FH L YTRP+L+E MY+ N+ IS+LT NSP WN+HPVY S +LV+ +
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDG+ PDS TN I CY+ +G D + +KSGWDEYGI++ P+ + I
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + + IA GSEMSGGI +VRA ++ +N+ G+RIKTA GRGGYV+++Y+ ++M
Sbjct: 279 ITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSM 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGNYG H D+ YD ALPVI I +D+V N+ +A LEGI GD F+ IC
Sbjct: 339 DNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE 507
++N ++ + + H PW C+ I G ++ V P CE
Sbjct: 399 LSNVSLSVQSAH---PWNCSLIEGYSNSVIPESCE 430
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/397 (54%), Positives = 288/397 (72%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTGSF+LISH
Sbjct: 23 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 82
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA ++ S D ++WPVI PLPSYGRGR+ R+ SLIFGTNLTDVI+TG NGTI
Sbjct: 83 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 142
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW FH L YTRP+L+E MY+ ++ IS+LT NSP WN+HPVY S +LVQ +
Sbjct: 143 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 202
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDGI+PDS TN I+ CY+ +GDD + +KSGWDEYGI++ P+ + I
Sbjct: 203 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 262
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + A IA GSEMSGGI +VRAE ++ +N+ G+RIKTA GRGGYVK++Y+ ++M
Sbjct: 263 ITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSM 322
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A +TGN+G H D+ YD ALP+I I ++V NV +A LEGI GD F+ IC
Sbjct: 323 DNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSIC 382
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N ++ + + H PW C+ I G ++ V P CE L
Sbjct: 383 LSNVSLSVQSMH---PWNCSLIEGYSNSVIPESCEQL 416
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/339 (63%), Positives = 271/339 (79%), Gaps = 2/339 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFG 123
ME SR + +V ++++ LLS R AE + + ++ +Y A+ CR HSA +TDFG
Sbjct: 1 MEFCLNSR-KPHALGIVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLTDFG 59
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
GDGKT NTKAFK AI+ LSQ++ DGGA+L VP GKWLTGSFNL SHFTLY+ KDA +L
Sbjct: 60 ATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVIL 119
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
+QD + +P+I+ LPSYG GRD GR++SLIFGTNLTDV++TG NGT++GQG WW +F
Sbjct: 120 GAQDESAYPLIEVLPSYGVGRDGG-GRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKF 178
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
K TRPYL+E MY++++QIS+LTL++SPSWNVHPVYS N+LV+ +TI+AP+ SPNT
Sbjct: 179 RAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNT 238
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGINPDSC RIEDC+IVSGDDC+AVKSGWD+YG +GMPTK L+IRRLTCISP SATI
Sbjct: 239 DGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATI 298
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
ALGSEMSGGI++V AEDI AI+T+SG+RIKT +GRGGY+
Sbjct: 299 ALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 305/443 (68%), Gaps = 6/443 (1%)
Query: 82 LLIVVALLSQRGAESRKARRLDSFEYNAISC--RAHSASITDFGGVGDGKTSNTKAFKDA 139
LL V+ + + GA L EY+ ++ R HS SIT+FG VGDG T NTKAF++A
Sbjct: 7 LLYVLLVQAFYGAWCSVGESLHC-EYSNLASLHRPHSVSITEFGAVGDGVTLNTKAFQNA 65
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
+ L+ +S GGA+L+VPAG+WLTGSF+LISH TL+L K A +L S N WPV+ PLPS
Sbjct: 66 LFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTAKN-WPVVDPLPS 124
Query: 200 YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFM 259
YGRGR+ R+ SLI+G NLTDV++TG+NGTIDGQG +WW F G+L YTRP+L+E M
Sbjct: 125 YGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGELNYTRPHLVELM 184
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ + IS+LT LNSP WN+HPVY +++V+ +TI+AP+ SPNTDG++PDS TN IEDC
Sbjct: 185 NSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDC 244
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
YIV+GDD V++KSGWDEYGI+Y P+ ++ I RLT + S+ IA+GSEMSGG+ ++ +
Sbjct: 245 YIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIK 304
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALP 439
D+ N+ +G+RIKT+ GRGGYV+++++ + + +K A TG YG H D YDPKALP
Sbjct: 305 DLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALP 364
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTS 499
I+ I + ++ D + +A LEGI GD F IC N T+ + KK PW C+++ G +
Sbjct: 365 AIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQ 424
Query: 500 GVTPP-PCELLPDQ-GPEKIRAC 520
V+P C+ L + PE C
Sbjct: 425 WVSPEITCDSLKESIFPEHGSDC 447
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/402 (54%), Positives = 285/402 (70%), Gaps = 4/402 (0%)
Query: 108 NAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFN 167
N R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGA+L+VPAG+WLTGSF+
Sbjct: 27 NPAVIRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 86
Query: 168 LISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
LISH TL+L KDA +L S + ++WPVI LPSYGRGR+ R+ SLI+G NLTDVI+TG
Sbjct: 87 LISHLTLWLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKSLIYGRNLTDVIITG 146
Query: 228 DNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
DNGTIDGQG++WW F L YTRP+L+E M T + IS+LT LNSP W +HPVY S +
Sbjct: 147 DNGTIDGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLNSPFWTIHPVYCSQV 206
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
+VQ +TI+AP+ SPNTDGI+PDS + IEDCYI +GDD +A+KSGWDEYG +Y P+K
Sbjct: 207 IVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKN 266
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ IR L + SA IA+GSEMSGG+ +V AE++ N+ +G+RIKTA GRGGYV++IY+
Sbjct: 267 ITIRGLVGQTT-SAGIAIGSEMSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYI 325
Query: 408 RGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP 467
M++ +K A TG YG H D YDPKALP+I+ I D+ NV A LEG+ GD
Sbjct: 326 SNMSLTDVKTAIRFTGQYGDHPDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDT 385
Query: 468 FTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
F IC++N + + +K PW C+ I G + V+P CE L
Sbjct: 386 FLDICLSNINLSVTSKS---PWNCSYIQGYSEAVSPEICEPL 424
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/457 (48%), Positives = 313/457 (68%), Gaps = 13/457 (2%)
Query: 68 RMSRLRSQVTKLVPLLIVVALLSQRGA---ESRKARRLDSFEYNAISCRAHSASITDFGG 124
R++ + + +LV +V+AL S S +++S+E R HS SIT+FG
Sbjct: 4 RLTDGGTFLLQLVDGFLVLALFSCSTWTVWSSSCCNQINSYE-----VRPHSVSITEFGA 58
Query: 125 VGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLA 184
VGDG T NT AF++AI L+ ++ GGA+L+VPAG+WLTGSF+LISH TL+L DA +L
Sbjct: 59 VGDGITLNTIAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILG 118
Query: 185 SQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH 244
S + ++WPV+ PLPSYG GR+ GR+ SLI+G NLTDV++TG+NGTIDGQG++WW F
Sbjct: 119 SMNSDDWPVVDPLPSYGHGRELPGGRHRSLIYGRNLTDVVITGNNGTIDGQGSIWWNNFW 178
Query: 245 KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
L YTRP+L+E M + + IS++T +NSP W +HPVY S++ +Q +TIIAP++SPNTD
Sbjct: 179 NKTLNYTRPHLVELMNSTGVLISNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTD 238
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIA 364
GINPDS N IEDCYI +GDD +++KSGWD YGI++G P+ + IRRL + SA IA
Sbjct: 239 GINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTT-SAGIA 297
Query: 365 LGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGN 424
+GSEMSGG+ +V AEDI ++ S +RIKT+ GRGGYV+++Y+ M + + A TG
Sbjct: 298 IGSEMSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGL 357
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKH 484
YG H D+ YDP ALPVI+ I +D++ + V A ++GI GD F IC++N T+ ++
Sbjct: 358 YGEHPDDTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLNVS--- 414
Query: 485 KKVPWTCADIGGMTSGVTPPPCELLPDQ-GPEKIRAC 520
KK+PW C+ + G + V+P CE L ++ PE C
Sbjct: 415 KKLPWNCSYVKGYSDLVSPEACEPLRERIFPEHCSDC 451
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/397 (54%), Positives = 288/397 (72%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTG FNLISH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA ++ S ++WPVI PLPSYGRGR+ GR+ SLIFG+NLTDVI+TG NGTI
Sbjct: 99 TLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA WW FH L YTRP+L+E MY+ ++ IS+LT NSP WN+HPVY S ++V+ +
Sbjct: 159 DGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDGINPDS TN I CY+ +GDD + +KSGWDEYGI++ + + I
Sbjct: 219 TILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISN 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + A IA+GSEMSGGI +VRAE ++ +N+ G+RIKTA GRGGYV+++Y+ ++M
Sbjct: 279 ITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSM 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
H + A +TGNYG H D+ YD ALP+I I ++V +V +A LEGI GD F+ IC
Sbjct: 339 HNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
I+N ++ + +++ PW C+ I G ++ VTP CE L
Sbjct: 399 ISNVSLSVRSRY---PWNCSRIQGYSNSVTPESCEQL 432
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/400 (53%), Positives = 286/400 (71%), Gaps = 4/400 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SIT+FG VGDG T NTKAF++AI L+ ++ GGA+L+VPAG+WLTGSF+LISH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA +L S + +WPV+ PLPSYGRGR+ GR+ SLI+G NLTDVI+TG+NGTI
Sbjct: 99 TLSLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW +F L YTRP+L+E M + + IS+LT LNSP W +HPVY S + VQ +
Sbjct: 159 DGQGSIWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
I+AP SPNTDGI+PDS N IEDCYI +GDD +A+KSGWDEYGIAYG P+ ++I R
Sbjct: 219 RILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
L + S IA+GSEMSGG+ +V AEDI+ ++ + +RIKT+ GRGGYV++IYV +T+
Sbjct: 279 LVGRTQTSG-IAIGSEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTL 337
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A TG YG H D+ Y+P ALPVI+ I +D+V +N+ A +EGI GD F IC
Sbjct: 338 ANVDIAITFTGLYGEHPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNIC 397
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQ 512
++N + + + + PW C+ + G + V P CE L ++
Sbjct: 398 LSNIILNVTSNY---PWNCSYVKGYSDLVQPEACEPLKER 434
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/248 (83%), Positives = 232/248 (93%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
E RK R L++ EY+AISCRAHSAS+ DFGGVGDG+T NTKAF+DA+++LS+Y S+GGAQ
Sbjct: 26 GECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQ 85
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
LYVPAGKWLTGSF+L SHFTL+LH+DA LLASQD+++WPVIKPLPSYGRGRDAAAGRYTS
Sbjct: 86 LYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTS 145
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLN 273
LIFGTNLTDVI+TGDNGTIDGQG LWWQ+FH GKLKYTRPYL+E MY+ +IQIS+LTLLN
Sbjct: 146 LIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLN 205
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SPSWNVHPVYS NIL+QGITI+APV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG
Sbjct: 206 SPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 265
Query: 334 WDEYGIAY 341
WDEYGIAY
Sbjct: 266 WDEYGIAY 273
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/397 (54%), Positives = 287/397 (72%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NTKAF++AI L+ ++ GGAQL+VPAG+WLTG FNLISH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL L KDA ++ S ++WPVI PLPSYGRGR+ GR+ SLIFG+NLTDVI+TG NGTI
Sbjct: 99 TLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA WW FH L YTRP+L+E MY+ ++ IS+LT NSP WN+HPVY S ++V+ +
Sbjct: 159 DGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDGINPDS TN I CY+ +GDD + +KSGWDEYGI++ + + I
Sbjct: 219 TILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISN 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T + A IA+GSEMSGGI +VRAE ++ +N+ G+RIKTA GRGGYV+++Y+ ++M
Sbjct: 279 ITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSM 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
H + A +TGNYG H D+ YD ALP+I I ++V +V +A LEGI GD F+ IC
Sbjct: 339 HNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
I+N ++ + ++ PW C+ I G ++ VTP CE L
Sbjct: 399 ISNVSLSVRPRY---PWNCSRIQGYSNSVTPESCEQL 432
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/391 (51%), Positives = 282/391 (72%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SIT+FG VGDG T NTKAF++A+ + +S GGA+L+VPAG+WLTGSF+LISH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L A +L S WPV+ PLPSYGRGR+ R+ SLI+G NLTDV++TG+NGTI
Sbjct: 99 TLWLDSGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW F G+L YTRP+L+E M + + IS+LT LNSP WN+HPVY +++V+ +
Sbjct: 159 DGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDG++PDS TN IEDCYIV+ DD V++K+GWDEYGI+Y P+ ++ I R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINR 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
LT + S+ IA+GSEMSGG+ ++ +D+ N+ +G+RIKT+ GRGGYV+++++ + +
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKL 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+K A TG YG H D ++DPKALP I+ I + ++ D + +A LEGI GD F IC
Sbjct: 339 DNVKKAIRFTGKYGEHPDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTP 503
N T+ + KK PW C+++ G + V+P
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSP 429
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/396 (53%), Positives = 283/396 (71%), Gaps = 1/396 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SIT+FG VGDG+T NT AF++A+ L ++ GGAQLYVPAG+WLTGSF LISH
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + +LASQD ++WP+I PLPSYGRGRD R+ SL++G +L DV++TG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLEDVVITGGNGTI 151
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW F L YTR +L+EF+ + NI +S+++LLNSPSW +HPVY SN++++G+
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++AP SPNTDG+ PDSCT IEDC I SG D V+VKSGWDEYGI G+P+ ++VIRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRR 271
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T +P SA IA GSEMSGGI++V ED++ N++ GV +KT GRGGYVK+I V +TM
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 413 HTMKWAFWMTGNYGS-HADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ A ++GN S H D YDP A PV++GI + N+S A L G+ PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE 507
C++N T+ + + W C+++ G + GVTP PC
Sbjct: 392 CLSNITLEVDDASQGSKWDCSNVKGASLGVTPTPCR 427
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/396 (52%), Positives = 283/396 (71%), Gaps = 1/396 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SIT+FG VGDG+T NT AF++A+ L ++ GGAQLYVPAG+WLTGSF LISH
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + +LASQD ++WP+I PLPSYGRGRD R+ SL++G ++ DV++TG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVEDVVITGGNGTI 151
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW F L YTR +L+EF+ + NI +S+++LLNSPSW +HPVY SN++++G+
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++AP SPNTDG+ PDSCT IEDC I SG D V+VKSGWDEYGI G+P+ ++VIRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRR 271
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T +P SA IA GSEMSGGI++V ED++ N++ GV +KT GRGGYVK+I V +TM
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 413 HTMKWAFWMTGNYGS-HADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ A ++GN S H D YDP A PV++GI + N+S A L G+ PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE 507
C++N T+ + + W C+++ G + GVTP PC
Sbjct: 392 CLSNITLEVDEASQGSKWDCSNVKGASLGVTPTPCR 427
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/389 (53%), Positives = 274/389 (70%), Gaps = 4/389 (1%)
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
TS+ D + + + GGA+L+VPAG+WLTGSFNLISH T+ L DA ++ SQD +
Sbjct: 26 TSSAMYCNDLTASVHRPHNKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSS 85
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLK 249
+WPVI PLPSYGRGR+ R+ SLIFG+NLTDVI+TG NGTIDGQG LWW FH L
Sbjct: 86 DWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLN 145
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
YTRP L+E MY+D + IS+LT +N+P WN+HPVY S +LVQ +TI+AP++SPNTDGI+PD
Sbjct: 146 YTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPD 205
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
S +N IEDCYI +GDD V +KSGWDEYGI++ P+ + IR +T + SA IA GSEM
Sbjct: 206 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 265
Query: 370 SGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
SGGI DVRAE ++ IN+ G+RIKTA GRGGYVK+IY+ ++M + A +TGNYG H
Sbjct: 266 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 325
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
D++YD ALPVI I +++V N+ A L GI GD F+ IC++N ++ + PW
Sbjct: 326 DDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPW 382
Query: 490 TCADIGGMTSGVTPPPCELL-PDQGPEKI 517
C+ I G ++ V P CE L P GP ++
Sbjct: 383 NCSLIEGFSNSVAPEICEQLRPSPGPGQV 411
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/286 (71%), Positives = 241/286 (84%), Gaps = 4/286 (1%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA--QLYVPAGKWLTG 164
Y A +CRAH+AS+ DFGGVGDG TSNT AF+ A++ LSQYS +GG LYVPAGKWLTG
Sbjct: 42 YLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTG 101
Query: 165 SFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI 224
FNL SHFTLYLH+DA +L SQD+ EWP++ PLPSYGRGRD GR+ SLI G+NLTDV+
Sbjct: 102 PFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVV 161
Query: 225 VTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
+TG NGTIDGQGA+WW +FHK +LKYTR YL+E M++D I IS+LTLLNSP+WN+HPVYS
Sbjct: 162 ITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYS 221
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
SNI+VQGITI+AP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWDEYGI+YGMP
Sbjct: 222 SNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMP 281
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
++ +VIRRLTC+SP SA IALGSEMSGG VRA A + E+GV
Sbjct: 282 SQHIVIRRLTCVSPTSAVIALGSEMSGG--GVRAAPDDAHHHEAGV 325
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 32/35 (91%)
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
MSGGIQDVRAEDI AINTES VRIKTAVGRG YV+
Sbjct: 1 MSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVR 35
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/304 (66%), Positives = 248/304 (81%), Gaps = 5/304 (1%)
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F K + TRPY++E M++D IQIS+LTL+NSPSW VHP+YSSNI ++G+TI+APV
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
SPNTDGI+PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI +G PT+ LVIRRLTCISP
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG--YVKDIYVRGMTMHTMK 416
SA IALGSEMSGGIQDVR EDI AI+T+S VRIKTAVGRG YVKDI+V+GM++ TMK
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ FWMTG+YGSH D +DPKALP I GINYRD+VA NV+ +A+LEGIS PFTGICI+N
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 477 TIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKK 536
+I ++ + KK+ W C D+ G+TS V+P C+LLP++G C FP + LPI+ V++K
Sbjct: 242 SIQVSEQRKKLQWNCTDVAGVTSNVSPNSCQLLPEKGK---LGCPFPNDKLPIENVQLKT 298
Query: 537 CTYR 540
C+ +
Sbjct: 299 CSLK 302
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/394 (51%), Positives = 270/394 (68%), Gaps = 4/394 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SITDFG VGDG+ NT AF++AI L ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 58 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 117
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L SQDL EWPVI LPSYGRGR+ GR+ SLI G N+ DV++TG NGTI
Sbjct: 118 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 177
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW FH L +TR +L+E + + +I IS++T NSP W +HPVY S++L+Q +
Sbjct: 178 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 237
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP +PN DGI+PDS +N I DCYI +GDD +++KSGWDE+GI YGMP+ + I
Sbjct: 238 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 297
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
++ SP SA IA GSEMSGGI DV + ++ N+ SG+RIKT GRGGY+ +I + + +
Sbjct: 298 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 357
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ AF T YG H D+ YDP+ALPVI+GI+ RD+V + A + G+ PF +C
Sbjct: 358 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 417
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
AN ++ + A W C++ G + V P PC
Sbjct: 418 FANVSLSVGAG----AWNCSNTYGFSERVVPSPC 447
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/394 (51%), Positives = 270/394 (68%), Gaps = 4/394 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SITDFG VGDG+ NT AF++AI L ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L SQDL EWPVI LPSYGRGR+ GR+ SLI G N+ DV++TG NGTI
Sbjct: 61 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 120
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW FH L +TR +L+E + + +I IS++T NSP W +HPVY S++L+Q +
Sbjct: 121 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 180
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP +PN DGI+PDS +N I DCYI +GDD +++KSGWDE+GI YGMP+ + I
Sbjct: 181 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 240
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
++ SP SA IA GSEMSGGI DV + ++ N+ SG+RIKT GRGGY+ +I + + +
Sbjct: 241 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 300
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ AF T YG H D+ YDP+ALPVI+GI+ RD+V + A + G+ PF +C
Sbjct: 301 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 360
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
AN ++ + A W C++ G + V P PC
Sbjct: 361 FANVSLSVGAG----AWNCSNTYGFSERVVPSPC 390
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/412 (49%), Positives = 272/412 (66%), Gaps = 2/412 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKTSNT AF++AI L ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 58 RPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 117
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L SQD W ++ PLPSYGRG + GRY SLI G NL+DV++TG+NGTI
Sbjct: 118 TLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTI 177
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW+ F L Y+RP+++EF+ +++I IS+LT LNSP+WN+HPVY SN+ VQ I
Sbjct: 178 DGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNI 237
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T AP SP T G+ PDS IED I G D + +KSGWDEYGIAYG PT+ + IRR
Sbjct: 238 TAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRR 297
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S + +A GSEMSGGI D+ E I ++ +G+++KT GRGGY+K I + + M
Sbjct: 298 VWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEM 357
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ TG SH D+ YDP ALPV+ GI ++D+V NVS+A GI PFT IC
Sbjct: 358 ENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSIC 417
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC-DFP 523
+ N ++ + + K PW C+++ G + V+P PC L + C FP
Sbjct: 418 LFNISLSITSNSSK-PWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSFP 468
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/416 (50%), Positives = 286/416 (68%), Gaps = 8/416 (1%)
Query: 110 ISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSS--DGGAQLYVPAGKWLTGSFN 167
I R HSASI DFG +GDG T NT AF++A+ LS ++ GGA LYVP G+WLTGSFN
Sbjct: 22 IGARPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFN 81
Query: 168 LISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
L SHFTLYL + A +L SQD ++WP+I PLPSYGRGR+ GR+ SL+ G NL DV++TG
Sbjct: 82 LTSHFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITG 141
Query: 228 DNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
+NGTIDGQGA WW+ G L +TR +L+EF+ + NI IS++TL+NSP W +HPVY +N+
Sbjct: 142 ENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNV 201
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
L+QG+TI+AP SPNTDGI+PDS +N I+DCYI +GDD +A+KSGWDEYGIAYG P+
Sbjct: 202 LIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSN 261
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ IRR+T + A IA+GSE SGGI++V ED+ A++T+SGV I+T VGRG Y++++ +
Sbjct: 262 IHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVL 321
Query: 408 RGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+T+ ++ A ++G H DN Y+ A PV++ + R + + + R+ GI P
Sbjct: 322 SSITLLDIQTAITISGFSSEHPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVP 381
Query: 468 FTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC-ELLPDQGPEKIRACDF 522
F IC+ + I + A W C D+ G +S VTP C EL + P+ AC F
Sbjct: 382 FRDICLED--IALDASTGLTAWKCTDVEGYSSSVTPKICKELSENNSPD---ACPF 432
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/412 (49%), Positives = 272/412 (66%), Gaps = 2/412 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKTSNT AF++AI L ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 123 RPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 182
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L SQD W ++ PLPSYGRG + GRY SLI G NL+DV++TG+NGTI
Sbjct: 183 TLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTI 242
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW+ F L Y+RP+++EF+ +++I IS+LT LNSP+WN+HPVY SN+ VQ I
Sbjct: 243 DGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNI 302
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T AP SP T G+ PDS IED I G D + +KSGWDEYGIAYG PT+ + IRR
Sbjct: 303 TAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRR 362
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S + +A GSEMSGGI D+ E I ++ +G+++KT GRGGY+K I + + M
Sbjct: 363 VWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEM 422
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ TG SH D+ YDP ALPV+ GI ++D+V NVS+A GI PFT IC
Sbjct: 423 ENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSIC 482
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC-DFP 523
+ N ++ + + K PW C+++ G + V+P PC L + C FP
Sbjct: 483 LFNISLSITSNSSK-PWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSFP 533
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 282/416 (67%), Gaps = 4/416 (0%)
Query: 110 ISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSS--DGGAQLYVPAGKWLTGSFN 167
I R HSASI DFG +GDG T NT AF++A+ LS ++ GGA LYVP G+WLTGSFN
Sbjct: 22 IGARPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFN 81
Query: 168 LISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
L SHFTLYL + A +L SQD ++WP+I PLPSYGRGR+ GR+ SL+ G NL DV++TG
Sbjct: 82 LTSHFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITG 141
Query: 228 DNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
+NGTIDGQGA WW+ G L +TR +L+EF+ + NI IS++TL+NSP W +HPVY +N+
Sbjct: 142 ENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNV 201
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
L+QG+TI+AP SPNTDGI+PDS +N I+DCYI +GDD +A+KSGWDEYGIAYG P+
Sbjct: 202 LIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSN 261
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ IRR+T + A IA+GSE SGGI++V ED+ A++T+SG+ I+T VGRG Y++++ +
Sbjct: 262 IHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVL 321
Query: 408 RGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+T+ ++ A ++G H DN ++ A PV++ + R + + + R+ GI P
Sbjct: 322 SSITLLDIQTAITISGFSSEHPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVP 381
Query: 468 FTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
F IC+ + I + A W C D+ G +S VTP C L + R P
Sbjct: 382 FRDICLED--IALDATTGLTAWKCTDVEGYSSSVTPKICSQLSENNTPDARPFQLP 435
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 274/416 (65%), Gaps = 9/416 (2%)
Query: 91 QRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDG 150
+RG + + LD R HS SI +FG VGDGKT NT AF++AI L ++ G
Sbjct: 21 ERGGQCTNSLTLDP--------RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKG 72
Query: 151 GAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR 210
GAQLYVP GKWLTGSFNL SH TL+L + A +L SQD + W VI+PLPSYGRG + GR
Sbjct: 73 GAQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGR 132
Query: 211 YTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLT 270
Y SLI G L DV++TGDNGTI+GQG++WW F L Y+RP+L+EF+ + N+ +S+LT
Sbjct: 133 YRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLT 192
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
LN+P++N+HPVY SN+ VQ I++ AP SP T GI PDS +T IEDC I G D +A+
Sbjct: 193 FLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIAL 252
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
KSGWDEYGIAYG PT + IRR+ S +++A GSEMSGGI +V E + N+ SG+
Sbjct: 253 KSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGI 312
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
+T GRGGY+++I + + M + AF TG GSH D+H+DP ALPV+ I ++++
Sbjct: 313 EFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVI 372
Query: 451 ADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
N+++A GI PFT IC++N ++ + W C+++ G + V P PC
Sbjct: 373 GTNITIAGSFTGIQESPFTSICLSNISLSTTPP-ASISWVCSNVSGFSQWVFPEPC 427
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 274/416 (65%), Gaps = 9/416 (2%)
Query: 91 QRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDG 150
+RG + + LD R HS SI +FG VGDGKT NT AF++AI L ++ G
Sbjct: 23 ERGGQCTNSLTLDP--------RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKG 74
Query: 151 GAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR 210
GAQLYVP GKWLTGSFNL SH TL+L + A +L SQD + W VI+PLPSYGRG + GR
Sbjct: 75 GAQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGR 134
Query: 211 YTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLT 270
Y SLI G L DV++TGDNGTI+GQG++WW F L Y+RP+L+EF+ + N+ +S+LT
Sbjct: 135 YRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLT 194
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
LN+P++N+HPVY SN+ VQ I++ AP SP T GI PDS +T IEDC I G D +A+
Sbjct: 195 FLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIAL 254
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
KSGWDEYGIAYG PT + IRR+ S +++A GSEMSGGI +V E + N+ SG+
Sbjct: 255 KSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGI 314
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
+T GRGGY+++I + + M + AF TG GSH D+H+DP ALPV+ I ++++
Sbjct: 315 EFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVI 374
Query: 451 ADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
N+++A GI PFT IC++N ++ + W C+++ G + V P PC
Sbjct: 375 GTNITIAGSFTGIQESPFTSICLSNISLSTTPP-ASISWVCSNVSGFSQWVFPEPC 429
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/242 (80%), Positives = 216/242 (89%)
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDGINPDSCTN RIEDCYIVSGDDCVAVKSGWDEYGIA+GMPT+QL+IRRLTCISPYSAT
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGI+DVRAEDI AINTESG+RIKTAVGRG Y+KDIYV+ MTMHTMKWAF M
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
G+Y SH DN YDP ALPVIQ INYRD+VA+NVS+AAR GI+GD FTGIC+AN T+GM A
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYRIN 542
KHKK PWTC D+ GMTSGVTPPPC+ LPDQGPEKI ACDFP SLPID V++K+C+Y ++
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISACDFPANSLPIDEVQLKQCSYSMS 240
Query: 543 YL 544
Y
Sbjct: 241 YF 242
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/436 (46%), Positives = 287/436 (65%), Gaps = 39/436 (8%)
Query: 103 DSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL 162
D E+ A++CR SA +TDFG +GDGKTSNTKAF++AI L+ + DGG+QL VP GKWL
Sbjct: 41 DFVEHAALNCRRQSAILTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWL 100
Query: 163 TGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTD 222
TGSFNL SHFTL++ + A +LASQD +E+P+++ LPSY RD R+ SLI+G+NLTD
Sbjct: 101 TGSFNLTSHFTLHIKEGATILASQDESEYPMLQVLPSY---RDT---RFASLIYGSNLTD 154
Query: 223 VIVTGDNGTIDGQGALWWQQFHKGKLK-YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHP 281
V++ GD GTI+GQG WW ++ G K RP L+E ++N+QIS++ L++SP W++HP
Sbjct: 155 VVIAGDKGTINGQGKSWWAKYRNGGFKSIQRPMLIEIQSSENVQISNINLIDSPMWSIHP 214
Query: 282 VYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY 341
VY N++++G+ I P+ S NTDGINP
Sbjct: 215 VYCRNVIIKGVKISNPIDSANTDGINP--------------------------------V 242
Query: 342 GMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
G P + L+IRR +CI+P A IA+GSEMSGGI+ VR ED+ NT+S ++I+TA+GRGGY
Sbjct: 243 GRPIEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETAMGRGGY 302
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLE 461
V++++ R T+ T K+ F MTG++ + PKA PV+ IN+RDI +NVS +A+LE
Sbjct: 303 VQNVWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVSTSAKLE 362
Query: 462 GISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACD 521
G+ +PFTG+C++N +I ++ K + C DI G + V P PC LLPD+ P C
Sbjct: 363 GMKSNPFTGVCMSNVSISLSPNASKQQFHCMDIVGESRSVKPQPCSLLPDKHPGVRFECT 422
Query: 522 FPTESLPIDMVEMKKC 537
FPTE +PI+ V +K+C
Sbjct: 423 FPTEKIPIENVVLKRC 438
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 263/397 (66%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG T NT F++AI L ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 33 RPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTSHL 92
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L KDA ++ ++++ EWP+++PLPSYG+G D R+ SLI G N+TDV++TG+NG I
Sbjct: 93 TLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGVI 152
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG WW F KL Y+RP+L+EF ++ I IS+LT LNSP+W +HPVY SN+ V I
Sbjct: 153 DGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSNVTVNNI 212
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P +DGI PDSC+N IED I D +++KSGWD YGI +G PT + I R
Sbjct: 213 TIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICR 272
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + A +ALGSEMSGGI DV + + + GV +TA GRGGY++D+ + + M
Sbjct: 273 VDLQASLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQM 332
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A TG++ SH D H+DP ALPVI GI +++V N+S+A L GI GDPFT IC
Sbjct: 333 EDVHVAIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDIC 392
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + W+C++I G + V P PC L
Sbjct: 393 LSNVNFSIPDSAHSTSWSCSNISGYSELVFPEPCTDL 429
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/410 (50%), Positives = 272/410 (66%), Gaps = 2/410 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SIT++GGVGDG+T NTKAF+ AI ++ GG LY+P G +LT SFNL SH
Sbjct: 37 RYDKISITEYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHM 96
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL K A + A QD WP+I PLPSYGRGR+ GRY S I G L DV++TG NGTI
Sbjct: 97 TLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTI 156
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW +H LKYTRP L+EF + I IS++ NSP WN+HPVY SN+++ +
Sbjct: 157 DGQGEVWWNMWHSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHV 216
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS N IED YI +GDD VA+KSGWDEYGIAYG P+ + IRR
Sbjct: 217 TILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRR 276
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A IA+GSE SGGI+++ AE I N GV IKT +GRGGY+K+I + + +
Sbjct: 277 ITGSSPF-AGIAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYI 335
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
T K+ +TG+ G H D +Y+P ALP+++GI+ +++ NV A ++G+ G PFTGIC
Sbjct: 336 DTAKYGIKITGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGIC 395
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDF 522
++ + + K W C+D+ G + V+P PC L G + + F
Sbjct: 396 LSEINLHGSLNSYKT-WKCSDVIGTSLKVSPWPCSELRTTGGYNLCSSTF 444
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/410 (50%), Positives = 270/410 (65%), Gaps = 2/410 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SITDFGGVGDG+T NTKAF+ AI ++ GG LY+P G +LT SFNL SH
Sbjct: 37 RYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHM 96
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL K A + A QD WP+I PLPSYGRGR+ GRY S I G L DV++TG NGTI
Sbjct: 97 TLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTI 156
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + LKYTRP L+EF + I IS++ NSP WN+HPVY SN+++ +
Sbjct: 157 DGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHV 216
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS N IED YI +GDD VA+KSGWD+YGIAYG P+ + IRR
Sbjct: 217 TILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRR 276
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A IA+GSE SGGI+++ AE I N GV IKT +GRGGY+K+I + + +
Sbjct: 277 ITGSSPF-AGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYV 335
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
T K+ + G+ G H D +Y+P ALPV++GI+ +++ NV A ++G+ G PFTGIC
Sbjct: 336 DTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGIC 395
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDF 522
++ + + K W C+D+ G + V+P PC L G + + F
Sbjct: 396 LSEINLHGSLNSYKT-WKCSDVSGTSLKVSPWPCSELRTTGGSNLCSSTF 444
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/394 (49%), Positives = 266/394 (67%), Gaps = 2/394 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SITDFG VGDGKT NT AF++AI L Y+++GGAQLY+P G WLTGS LISH
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L A +L S+D ++PVI LPSYGRGR+ R++SLI G L DVI+TGDN TI
Sbjct: 61 TLFLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATI 120
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW F K L YTR +++E + + NI IS+LT NSP W +HPVY N++V+ +
Sbjct: 121 DGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSL 180
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+ P +PNTDGI+PDS + IEDCYI GDD +++KSGWD++G ++ MP+K + ++R
Sbjct: 181 TILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQR 240
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S SA I+ GSEMSGGI DV+ + + GVRIKTAVGRGGYV+ I V+ + +
Sbjct: 241 ILAFSRSSAGISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVL 300
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
H+++ A + GNYG H D +++ A P+I+ I ++IV +N++ A G+ PF I
Sbjct: 301 HSIRTAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIH 360
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
+AN I + K W C+D+ G V P PC
Sbjct: 361 LAN--IALQVNTTKQIWNCSDVAGSYIFVFPQPC 392
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/399 (46%), Positives = 271/399 (67%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDGKT NT F++A+ ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L ++A ++ ++D ++WP+++PLPSYG+G D R+ SLI G NL+DV++TG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW H +L ++RP+++EF++++ + IS+LT LNSP+W++HPVY SN+ V +
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P TDGI PDSC+N IED I G D +++KSGWD YGI++G PT + I R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + A +A+GSEMSGGI D+ + I+ ++ G+ +T GRGGY+ ++ V + M
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
++ A TGN+ SH D+H+DP LPVI I +++ N+S+A L GI GDPF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPD 511
++N +A WTC+++ G + V P PC L D
Sbjct: 391 LSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSELHD 429
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/399 (46%), Positives = 271/399 (67%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDGKT NT F++A+ ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L ++A ++ ++D ++WP+++PLPSYG+G D R+ SLI G NL+DV++TG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW H +L ++RP+++EF++++ + IS+LT LNSP+W++HPVY SN+ V +
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P TDGI PDSC+N IED I G D +++KSGWD YGI++G PT + I R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + A +A+GSEMSGGI D+ + I+ ++ G+ +T GRGGY+ ++ V + M
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
++ A TGN+ SH D+H+DP LPVI I +++ N+S+A L GI GDPF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPD 511
++N +A WTC+++ G + V P PC L D
Sbjct: 391 LSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSELHD 429
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/401 (49%), Positives = 265/401 (66%), Gaps = 1/401 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGVGDGKT NTKAF+ AI ++ GG LY+P G +LT SFNL SH
Sbjct: 39 RNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPPGVYLTESFNLTSHM 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL KDA + A+QD WP+I PLPSYGRGR+ GRY S I + DVI+TG+NGTI
Sbjct: 99 TLYLSKDAVIRATQDTGSWPLIAPLPSYGRGRELPGGRYMSFIHADGVHDVIITGENGTI 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + + L++TRP L+E + + NI IS++ +SP WN+HPVY N++VQ +
Sbjct: 159 DGQGEVWWNMWRQRTLQFTRPNLIELINSRNIIISNVIFRDSPFWNIHPVYCRNVVVQFV 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR
Sbjct: 219 TILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRR 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A IA+GSE SGG+Q+V AE I N G+ +KT +GRGG +++I V + M
Sbjct: 279 ITGSSPF-AGIAVGSETSGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYM 337
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ + G+ G H D++++P ALPV++G+ RD+ +V + G+ PFTGIC
Sbjct: 338 EKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGIC 397
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
++ + K PW C+D+ G GV+P PC L G
Sbjct: 398 LSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELTSPG 438
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 266/401 (66%), Gaps = 2/401 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SITD+GGVGDG+T NTKAF+ AI ++ GG LY+P G +LT SFNL SH
Sbjct: 37 RYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHM 96
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
T YL K A + A QD WP+I PLPSYGRGR+ GRY S I G L DV++TG NGTI
Sbjct: 97 TFYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTI 156
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + LKYTRP L+EF + I IS++ NSP WN+HPVY SN+++ +
Sbjct: 157 DGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHV 216
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS N IED YI +GDD VA+KSGWDEYGIAYG P+ + IRR
Sbjct: 217 TILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRR 276
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A IA+GSE SGGI+++ AE I N GV IKT +GRGGY+K+I + + +
Sbjct: 277 ITGSSPF-AGIAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYI 335
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
T K+ + G+ G H D +Y+P ALP+++GI+ +++ NV A ++G+ G PFTGIC
Sbjct: 336 DTAKYGIKIAGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGIC 395
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
++ + + K W C+D+ G + V+P PC L G
Sbjct: 396 LSEINLHGSLNSYKT-WKCSDVIGTSLKVSPWPCSELRTTG 435
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/466 (47%), Positives = 291/466 (62%), Gaps = 69/466 (14%)
Query: 82 LLIVVALLSQRGAESRKARR--LDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDA 139
LL+ +A+ ESR R E++A++CR HSA +TDFG VGDGKTSNTKAF++A
Sbjct: 8 LLVFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNA 67
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
I++LSQ ++DGGAQL VP GKWLTGSFNL SHFTL++ + A +LASQD +EWPVI PLPS
Sbjct: 68 ISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPS 127
Query: 200 YGRGRDAAA-GRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEF 258
YG+GRD GR+ SLI GTNLTDV++TG+NGTI+GQG WW +F K + K TRPYL+E
Sbjct: 128 YGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEI 187
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+++ NIQIS++TL++SPSWN+HPVY ++++V+ +T++APVT PNTDGINPDSCTNT IED
Sbjct: 188 LFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIED 247
Query: 319 CYIVSGDDCVAVKSGWDEYGI----AYGMPTKQLVIRRLTCISPYSATIALGSEMSG--G 372
CYIVSGDDC+AVKSGWD+YGI G K + RR+T T+ MSG G
Sbjct: 248 CYIVSGDDCIAVKSGWDQYGIKTAVGRGAYVKDIYARRITM-----KTMKYVFWMSGNYG 302
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
D KA+ + +I R MT A+N
Sbjct: 303 SHPDEGFDPKALPE---------------ITNINYRDMT-----------------AENV 330
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
+L I + I NV++A +AAK KK+ W C
Sbjct: 331 TMSASLDGIDKDPFTGICISNVTIA----------------------LAAKAKKMQWNCT 368
Query: 493 DIGGMTSGVTPPPCELLPDQGPE-KIRACDFPTESLPIDMVEMKKC 537
D+ G+TS VTP PC LLP++ + K C FP++ +PI+ V +KKC
Sbjct: 369 DVAGVTSRVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 414
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 2/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP GKWLTGSF+L SH
Sbjct: 35 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHL 94
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L K A +L SQD + W ++ PLPSYGRG + RY SLI G LTDV+VTGDNGTI
Sbjct: 95 TLFLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYRSLINGDMLTDVVVTGDNGTI 154
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW F L Y+RP+L+EF +D + +S+LT LN+P++N+HPVY SN+LVQ I
Sbjct: 155 DGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSNVLVQNI 214
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
++ AP SP T GI PDS N IED I G D +++KSGWDEYGIAY PT+ + IRR
Sbjct: 215 SVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRR 274
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S ++IA GSEMSGGI +V E + N+ SG+ +T GRGGY+K I + + +
Sbjct: 275 VYLQSSSGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVEL 334
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ AF G+ GSH D+ +DP A+P++ I +++ N++MA G++ PFT IC
Sbjct: 335 KNINMAFGAIGDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSIC 394
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ N ++ + A WTC+++ G + V+P PC L
Sbjct: 395 LFNVSLTIPATSTS--WTCSNVIGFSEFVSPEPCPEL 429
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/413 (48%), Positives = 270/413 (65%), Gaps = 5/413 (1%)
Query: 106 EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGS 165
+Y R HS SI++FG VGDGKT NT AF++A+ L Y+ GG QLY+PAG+WLTGS
Sbjct: 38 KYKNWKNRPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGS 97
Query: 166 FNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIV 225
LISH TL+L +A +L SQDLN++PVI LPSYGRGR+ R+ SLI G L DV++
Sbjct: 98 IKLISHLTLFLENEATILGSQDLNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVI 157
Query: 226 TGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
TGDNGTIDGQGA+WW F L YTR +L+E + + +I IS+LT +SP W +HPVY
Sbjct: 158 TGDNGTIDGQGAVWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCR 217
Query: 286 NILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPT 345
N++V+ +T++AP+ SPNTDGI+PDS IEDCYI GDD +A+KSGWDEYG AYGMP+
Sbjct: 218 NVVVKDMTLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPS 277
Query: 346 KQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+ + IRR+ S SA IA GSEMSGGI DV+ + + G+R KT GRGGY+++I
Sbjct: 278 QHIDIRRIVVHSETSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNI 337
Query: 406 YVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISG 465
V + M ++ A TGNYG H D +++ PVI+ + +IV ++++ A G+
Sbjct: 338 TVDNVNMRSVNTAIAFTGNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPE 397
Query: 466 DPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIR 518
PF I +AN I + K + W C+ + G V P PC PD E+++
Sbjct: 398 SPFLNIHLAN--IALDTKSESEDWNCSSVAGTYFFVWPQPC---PDFTKEELK 445
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/409 (48%), Positives = 269/409 (65%), Gaps = 3/409 (0%)
Query: 108 NAISCRAHS--ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGS 165
N +S R S S+TDFGGVGDG+T NTKAF+ A+ ++ GG LYVP G +LT S
Sbjct: 62 NIVSLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYLTES 121
Query: 166 FNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIV 225
FNL SH TLYL A + A+Q+L WP+I PLPSYGRGR+ GRY S I G L+DV++
Sbjct: 122 FNLTSHMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGDGLSDVVI 181
Query: 226 TGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
TG+NGTIDGQG +WW + + L++TRP L+EF+ + +I IS++ NSP WN+HPVY S
Sbjct: 182 TGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCS 241
Query: 286 NILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPT 345
N++V+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+
Sbjct: 242 NVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPS 301
Query: 346 KQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+ IRRLT SP+ A IA+GSE SGG+++V AE I N G+ IKT GRGG +K+I
Sbjct: 302 YGITIRRLTGSSPF-AGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNI 360
Query: 406 YVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISG 465
V + + + + G+ G H D ++P ALPV++GI +++ V+ A + G+
Sbjct: 361 TVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRN 420
Query: 466 DPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGP 514
PFT +C++N + W C+D+ G V+P PC L Q P
Sbjct: 421 SPFTDVCLSNINFHGMRGPRSPSWKCSDVFGFAHQVSPWPCSQLSSQEP 469
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/395 (49%), Positives = 267/395 (67%), Gaps = 3/395 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI++FG VGDGKT NT AF++A+ L Y+ GG QLY+PAG+WLTGS LISH
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG-DNGT 231
TL+L +A +L SQDL ++P+I LPSYGRGR+ R++SLI G L DV++TG DNGT
Sbjct: 61 TLFLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGT 120
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
IDGQGA+WW F+ L YTR +L+E + + +I IS+LT +SP W +HPVY N++V+
Sbjct: 121 IDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKD 180
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+TI+AP+ SPNTDGI+PDS N IEDCYI G D +A+KSGWDEYG +YGMP+K + +R
Sbjct: 181 MTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVR 240
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R+T S SA IA GSEMSGGI DV+ + + G+R KT +GRGGY++++ V +
Sbjct: 241 RITVHSKTSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVD 300
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
MH++ A TGNYG H D +++ PVI+ I+ ++V +N++ A G+ PF I
Sbjct: 301 MHSVGTAIAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNI 360
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
+AN I + K + W C+ + G V P PC
Sbjct: 361 HLAN--IALDVKSESDDWNCSSVAGTYFFVWPQPC 393
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/237 (79%), Positives = 210/237 (88%)
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGINPDSCTNT+IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP SA I
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
ALGSEMSGGI+DVRAEDI AIN+ESGVRIKTA+GRGGYVKDIYV+GMTM TMKW FWMTG
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
NYGSHADN+YDP ALP+IQ INYRD+VA+NV+MAARLEGI+GDPFTGICI+N TIG+A K
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 484 HKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
KK+ W C DI G++S V P PC LP+QGPEK+ AC+FP + L ID VE + C+Y
Sbjct: 181 PKKLQWNCTDISGISSSVVPQPCNALPNQGPEKLPACNFPEDRLSIDEVEAQVCSYE 237
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 266/397 (67%), Gaps = 1/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R +S SI DFG VGDG T NT AF+ A+ LS Y+ GGA+LY+PAG+WLTGS LISH
Sbjct: 81 RPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHL 140
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L A +L S+D N++P+I LPSYGRGR+ RY+SLI G L DVI+TG+NGTI
Sbjct: 141 TLFLESGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTI 200
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQGA+WW F L++TR +L+E + +I IS+LT NSP W +HPVYS N++V+ +
Sbjct: 201 DGQGAVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRV 260
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+ P+ SPNTDGI+PDS IEDCYI GDD +++KSGWD+YG +GMP+K + I+R
Sbjct: 261 TILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQR 320
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S SA I+ GSEMSGGI D+ +D+ N+ GVR KT+VGRG Y++++ V + M
Sbjct: 321 VVAFSHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVM 380
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
HT++ A + GNYG H D +++ A PVI+ I +IV +N++ A L G+ PF I
Sbjct: 381 HTVRTAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIH 440
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ + K+ PW C+ + G + V P PC L
Sbjct: 441 LTKVVLDTRTT-KQGPWNCSWVTGFYNFVLPKPCPEL 476
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/397 (48%), Positives = 265/397 (66%), Gaps = 2/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP GKWLTGSF+L SH
Sbjct: 37 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHL 96
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL++ K A +L SQD + W ++ PLPSYGRG + RY SLI G L DV+VTGDNGTI
Sbjct: 97 TLFVEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVTGDNGTI 156
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW F L Y+RP+L+EF +D + +S+LT LN+P++++HPVY SN++VQ I
Sbjct: 157 DGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNI 216
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
++ AP SP T GI PDS N IED I G D +++KSGWDEYGIAY PT + IRR
Sbjct: 217 SVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRR 276
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S +++A GSEMSGGI +V E + N+ SG+ +T GRGGY+K I + + +
Sbjct: 277 VYLQSSSGSSVAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVEL 336
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
AF G+ GSH D+++DP A+PV+ I + ++ N++MA G++ PFT +C
Sbjct: 337 KNTNTAFGAIGDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLC 396
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ N + +A ++ PWTC+++ G + V+P PC L
Sbjct: 397 LFN--VSLAIRNTLSPWTCSNVVGFSESVSPEPCPEL 431
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/268 (68%), Positives = 225/268 (83%), Gaps = 2/268 (0%)
Query: 245 KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
KG+ TRPY++E MY++ IQIS+LTL+NSPSW VHP+YSS+I++QG+TI+APV SPNTD
Sbjct: 119 KGQFTLTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTD 178
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIA 364
GI+PDSC+NTRIEDCYIVSGDDC+AVKSGWDEYGI GMP++ ++IRRLTCISP SA IA
Sbjct: 179 GIDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIA 238
Query: 365 LGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGN 424
LGSEMSGGIQD+RAED+ AINT+S VRIKTAVGRG YV++I+V GM + TMK+ FWMTG+
Sbjct: 239 LGSEMSGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGS 298
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKH 484
YGSH D +DPKALP I GINYRD++A NV+ A+LEGI+ DPFTGICI+NA I
Sbjct: 299 YGSHPDTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVG-- 356
Query: 485 KKVPWTCADIGGMTSGVTPPPCELLPDQ 512
KK+ W C D+ G+TS V+P PC LL ++
Sbjct: 357 KKLAWNCTDVHGVTSNVSPEPCALLQEK 384
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 265/401 (66%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
A+ R HS SI +FG VGDGKT NT AF++A+ ++ GGA+LYVP+GKWLTGSFNL
Sbjct: 32 AVDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNL 91
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
SH TL+L + A ++ASQD W + PLPSYGRG D +GRY SLI+G NL+DV++TGD
Sbjct: 92 TSHLTLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGRYRSLIYGQNLSDVVITGD 151
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
N IDGQG++WW L Y+RP+++E + +DNI IS+LT LNSP+W++HPVY SN+
Sbjct: 152 NAIIDGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIHPVYCSNVQ 211
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
+Q IT+ AP P T GI PDS + I + I +G D + +KSGWD+YG+AYG PT ++
Sbjct: 212 IQKITVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKV 271
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
IR + S A +A GSEMSGGI D+ AE + N+ G+ +KT GRGGY+K+I++
Sbjct: 272 HIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFIS 331
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+ + MTG+ GSH D+ YDP A+P + + + +++ N+++A GI PF
Sbjct: 332 DAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPF 391
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
T IC+ NAT +++ W C+DI G++ V P PC L
Sbjct: 392 TPICLLNATFSSSSESSSPSWFCSDIMGISEEVFPEPCPDL 432
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/397 (47%), Positives = 264/397 (66%), Gaps = 1/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++A+ ++ GGA+LYVP+GKWLTGSFNL SH
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A ++ASQD W + PLPSYGRG D GRY SLI+G NL+DV++TGDNG I
Sbjct: 96 TLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGII 155
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW L Y+RP+++E + +DNI IS+LT LNSP+W++HPVY SNI +Q I
Sbjct: 156 DGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKI 215
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T+ AP P T GI PDS + I++C I +G D + +KSGWDEYG+AYG PT + IR
Sbjct: 216 TVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRG 275
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S A +A GSEMSGGI D+ AE + N+ G+ +KT GRGGY+K+I++ +
Sbjct: 276 VYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKL 335
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ MTG+ GSH D+ YDP A+P + + + +++ N+++A GI PFT IC
Sbjct: 336 ENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPIC 395
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N T +++ W C+++ G++ V P PC L
Sbjct: 396 LSNVTFSTSSESSPS-WFCSNVMGISKEVFPEPCPDL 431
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/399 (45%), Positives = 264/399 (66%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG+T NT F++A+ + ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL + A ++ ++D ++W +++PLPSYG+G D R+ SLI G NLTDV++TG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WWQ +L ++RP L+EF+Y+++I IS+LT LNSP+W++HPVY SN+ V +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P TDGI PDSC+N IED I + +++KSGWD YGI++G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ +S A +A GSEMSGGI D+ ++ ++ G+ KT+ GRGGY++D+ + + M
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQM 339
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ TGN +H D+ +DP LP I + +++ N+S+A L GI G PFT IC
Sbjct: 340 ENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAIC 399
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPD 511
++N MAA W+C+D+ G + V P PC L D
Sbjct: 400 LSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRD 438
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 283/450 (62%), Gaps = 2/450 (0%)
Query: 76 VTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKA 135
+ +LV L +VA+L G +A + R HS +IT+FG VGDG T NT +
Sbjct: 1 MARLVALASMVAVL-VLGLACAEAEPQCTRRRPPAPPRPHSVTITEFGAVGDGVTLNTVS 59
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
F++A+ L ++ GGAQLY+P G+WLTGSFNL SH TL+L A ++ +QD+++WPV++
Sbjct: 60 FQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFLESGAVIVGTQDVSQWPVVE 119
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYL 255
PLPSYGRG D R+ SLI G NL DV++TG+NGTIDGQG+ WW F KL Y+RP+L
Sbjct: 120 PLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDGQGSTWWNWFRSNKLNYSRPHL 179
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
+EF+ ++ I IS++T LNSP+W++HPVY SN++V +TI + +P GI PDSC+N
Sbjct: 180 VEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMC 239
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
IED I D +++KSGWD+ GIA+G PT + I RL S A +A GSEMSGGI D
Sbjct: 240 IEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGSEMSGGISD 299
Query: 376 VRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP 435
+ A+ + ++ GV KTA GRGGY++D + + M + A TG++ SH D+ +DP
Sbjct: 300 IHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFDP 359
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP-WTCADI 494
ALPV+ I +++ +S+A L GI+GDPFT IC++N +A W+C+++
Sbjct: 360 AALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSHWSCSNV 419
Query: 495 GGMTSGVTPPPCELLPDQGPEKIRACDFPT 524
G + V P PC L Q + P+
Sbjct: 420 SGYSELVFPEPCLDLQTQSSDASVCSTLPS 449
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP GKWLTGS NL SH
Sbjct: 38 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLTSHL 97
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L K A +L SQD + W ++ PLPSYGRG + RY SLI G NL DV++TGD+G I
Sbjct: 98 TLFLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVI 157
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW F L Y+RP+L+EF + + +S+LT LN+P++N+HPVY SN+ V I
Sbjct: 158 DGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNI 217
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
++ AP SP T GI PDS + IE C I +G D +A+KSGWD+YGIAYG P+K + IRR
Sbjct: 218 SVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRR 277
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S ++IA GSEMSGGI +V E ++ N+ G++I+T GRGGY+K I V + M
Sbjct: 278 VHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEM 337
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ AF +G++GSH D+ YDP ALP++Q I +++ N+ +A GI PFT I
Sbjct: 338 ENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIY 397
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N T + + W C+D+ G + V PPPC L
Sbjct: 398 LSNITFSINSSSSTS-WICSDVSGFSESVIPPPCSDL 433
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP GKWLTGS NL SH
Sbjct: 33 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLTSHL 92
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L K A +L SQD + W ++ PLPSYGRG + RY SLI G NL DV++TGD+G I
Sbjct: 93 TLFLXKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVI 152
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW F L Y+RP+L+EF + + +S+LT LN+P++N+HPVY SN+ V I
Sbjct: 153 DGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNI 212
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
++ AP SP T GI PDS + IE C I +G D +A+KSGWD+YGIAYG P+K + IRR
Sbjct: 213 SVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRR 272
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S ++IA GSEMSGGI +V E ++ N+ G++I+T GRGGY+K I V + M
Sbjct: 273 VHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEM 332
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ AF +G++GSH D+ YDP ALP++Q I +++ N+ +A GI PFT I
Sbjct: 333 ENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIY 392
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N T + + W C+D+ G + V PPPC L
Sbjct: 393 LSNITFSINSSSSTS-WICSDVSGFSESVIPPPCSDL 428
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/416 (47%), Positives = 271/416 (65%), Gaps = 9/416 (2%)
Query: 107 YNAISC--------RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPA 158
Y+A +C R+ SITDFGGVGDG+T NTKAF+ A+ ++ GG LYVP
Sbjct: 23 YSAATCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPP 82
Query: 159 GKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGT 218
G +LT SFNL SH TLYL A + A+Q+L WP+I PLPSYGRGR+ GRY S I G
Sbjct: 83 GVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGD 142
Query: 219 NLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWN 278
L+DV++TG+NGTIDGQG +WW + + L++TRP L+EF+ + +I IS++ NSP WN
Sbjct: 143 GLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWN 202
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+HPVY SN++V+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYG
Sbjct: 203 IHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 262
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
IAYG P+ + IRR+T SP+ A IA+GSE SGG+++V AE I N G+ IKT GR
Sbjct: 263 IAYGRPSYGITIRRVTGSSPF-AGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGR 321
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA 458
GG +K+I V + + + + G+ G H D ++P ALPV++GI +++ V+ A
Sbjct: 322 GGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAG 381
Query: 459 RLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGP 514
+ G+ PFT +C+++ + W C+D+ G V+P PC L Q P
Sbjct: 382 LIHGLRNSPFTDVCLSDINFHGMEGPRSPSWKCSDVFGFAHQVSPWPCSQLSSQEP 437
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 265/398 (66%), Gaps = 1/398 (0%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
A+ R H+ SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP G WLT SFNL
Sbjct: 31 ALKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNL 90
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
SH TL+L K A +L SQD W V+ PLPSYGRG + GRY SLI G L DV++TG+
Sbjct: 91 TSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHDVVITGN 150
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
NG IDG G WW+ F L Y+RP+L+E + +D++ +S+LT LN+P++++HPVY SN+
Sbjct: 151 NGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSNVH 210
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
+ ++I AP SPNT GI PDS + IEDC I +G D +++KSGWDEYGIAYG PT+ +
Sbjct: 211 IHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENV 270
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
IRR+ + +TIA GS+MSGGI ++ E++ N++SG+ +T GRGGY+K+I +
Sbjct: 271 HIRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIIS 330
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+ M + A TG GSH D+ +DP ALP++ I +D++ N+++A G+ PF
Sbjct: 331 DIEMENIYTAIAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPF 390
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
T IC++N T+ + +PW C+++ G + V P PC
Sbjct: 391 TNICLSNITLSTNSV-SSIPWECSNVSGFSDYVLPKPC 427
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 267/408 (65%), Gaps = 1/408 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP GKWLTGSFNL SH
Sbjct: 33 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 92
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L K A L+ +QD + W V++PLPSYGRG + GRY SLI G L DV+VTG+NGTI
Sbjct: 93 TLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTI 152
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DG G +WW + L ++RP+L+EF+ +D + +S+LT LN+P++++HPVY S++ +Q +
Sbjct: 153 DGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNV 212
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
+I P SP T GI PDS N IEDC + G D +++KSGWDEYGIAYG PT+ + IRR
Sbjct: 213 SISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRR 272
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + + +A GS+MSGGI +V E N+ SG+ +T GRGGY+K+I + + M
Sbjct: 273 VQLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQM 332
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A TGN GSH D+ +DP ALP + I +D++ N+++A L GI PFT IC
Sbjct: 333 ENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNIC 392
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC 520
++N T+ + + W C+++ G + V P PC L + + +C
Sbjct: 393 LSNITLSTNSV-SPITWACSNVSGFSDSVLPEPCPELGNTSYDSSSSC 439
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 257/397 (64%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + SI +FGGVGDG+T NT AF A+ ++ GG L VPAG WLTGSFNL SH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A L A+Q+ WP+ +PLPSYGRGR+ RY S I G L DV++TGD G I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASFIHGDGLHDVVITGDKGII 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + + L++TRP L+EFM++ I IS++ L NSP WN+HPVY N+++ +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
IIAP SPNTDG++PDS TN IED YI +GDD VA+KSGWDEYGIAYG P+ + IRR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ SP+S IA+GSE SGG+ DV ED N+ G+ IKT +GRGG++++I V + M
Sbjct: 279 VRGSSPFSG-IAIGSEASGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
++++ + G+ G H D H+ ALP + G++ +++ NV +EGI PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+AN + + W C D+ G GV P PC L
Sbjct: 398 LAN--VKLFGWRNNAAWKCRDVHGAALGVQPGPCAEL 432
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 280/406 (68%), Gaps = 5/406 (1%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SITDFGGVGDGKTSNT AF+ A+ L ++++GGAQL VP G WL+GSFNL S+FTL+L
Sbjct: 73 SITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLE 132
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +L S+DL+EWP+I+PLPSYGRGR+ GR+ SLI G NLT+V++TG+NGTIDGQG
Sbjct: 133 RGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGK 192
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW+ + L +TR +L+E + NI IS+LTLLNSP W +HPVY SN++++ +TI+AP
Sbjct: 193 MWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAP 252
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YG+A P+ +VIRR++ +
Sbjct: 253 MNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTT 312
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + +GSEMSGGI ++ EDI ++ +G+RIKT GRGGY+ +I + + +K
Sbjct: 313 RTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKV 372
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ H+D+ +DPKALP ++GI ++V+ N A L G+ G F +C+ N T
Sbjct: 373 PIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVT 432
Query: 478 IGMAAKHKKVPWTCADIGGMTSGVTPPPC-ELLPDQGPEKIRACDF 522
+ K +K W C D+ G S V P C +LL +G I C +
Sbjct: 433 LLGLPKTEK--WKCKDVSGYASDVFPLSCPQLLQKKG--SIAQCSY 474
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 269/408 (65%), Gaps = 3/408 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT +F++AI L ++ GGA+LYVP G+WLTGSFNL SH
Sbjct: 35 RPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLTGSFNLTSHL 94
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L K A +L SQD + + +I+PLPSYGRG + GRY SLI G L DV++TGDNGTI
Sbjct: 95 TLFLEKGAVILGSQDPSHYDLIEPLPSYGRGIELPGGRYRSLINGYKLRDVVITGDNGTI 154
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW F+ L Y+RP+L+EF+ ++ I +S+LT LN+P++N+HPVY SN+LVQ +
Sbjct: 155 DGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVYCSNVLVQNM 214
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
++ AP SP T GI PDS N IE+ I G D +++KSGWDEYGIAY T+ + IRR
Sbjct: 215 SLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRR 274
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S ++IA GSEMSGGI +V E + N+ SG+ +T GRGGY+K I++ + +
Sbjct: 275 VHLQSSSGSSIAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVEL 334
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A G++G H D+ +DPKA+PV+ I +++ N+S A GI PFT +C
Sbjct: 335 ENINLALGAIGDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLC 394
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC 520
+ N T+ +++ + WTC+++ G + V P PC L AC
Sbjct: 395 LFNITLMVSSSNS---WTCSNVIGYSDSVFPVPCPELKSPYSNSSSAC 439
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 281/450 (62%), Gaps = 2/450 (0%)
Query: 76 VTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKA 135
+ +LV L VA+L G +A + R HS +IT+FG VGDG T NT +
Sbjct: 1 MARLVALASAVAVL-VLGLACAEAEPQCTRRRPPAPPRPHSVTITEFGAVGDGVTLNTVS 59
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
F++A+ L ++ GGAQLY+P G+WLTGSFNL SH TL+L A ++ +QD+++WPV++
Sbjct: 60 FQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFLESGAVIVGTQDVSQWPVVE 119
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYL 255
PLPSYGRG D R+ SLI G NL DV++TG+NGTIDGQG+ WW F KL Y+RP+L
Sbjct: 120 PLPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDGQGSTWWNWFRSNKLNYSRPHL 179
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
+EF+ ++ I IS++T LNSP+W++HPVY SN++V +TI + +P GI PDSC+N
Sbjct: 180 VEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMC 239
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
IED I D +++KSGWD+ GIA+G PT + I RL S A + GSEMSGGI D
Sbjct: 240 IEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALTFGSEMSGGISD 299
Query: 376 VRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP 435
V A+ + ++ GV KTA GRGGY++D + + M + A TG++ SH D+ +DP
Sbjct: 300 VHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFDP 359
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP-WTCADI 494
ALPV+ I +++ +S+A L GI+GDPFT IC++N +A W+C+++
Sbjct: 360 TALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSHWSCSNV 419
Query: 495 GGMTSGVTPPPCELLPDQGPEKIRACDFPT 524
G + V P PC L Q + P+
Sbjct: 420 SGYSELVFPEPCLDLQTQSSDASICSTLPS 449
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/469 (44%), Positives = 302/469 (64%), Gaps = 9/469 (1%)
Query: 46 IVGNTTKQHSKITYLITTMELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSF 105
I+G+ TK I +L T L+ +S L+ L PL I LLSQ+ S S
Sbjct: 10 ILGSYTKPSCSILFLFFTF-LTILS-LQFSTRSLFPLSI---LLSQQPQPSLVDPTTCSG 64
Query: 106 EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGS 165
+N + R SI DFGGVGDGKTSNT++F+ AI + ++ GG+QL +P G WLTGS
Sbjct: 65 FFNNVPPRKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGS 124
Query: 166 FNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIV 225
FNL S FTL+LH A +L SQD+ EWP+I+PLPSYGRGR+ GR+ SLI + +V++
Sbjct: 125 FNLTSDFTLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVI 184
Query: 226 TGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
TG+NGT+DGQG +WW+ + L +TR +L+E M ++N+ +S+LT NSP W +HPVY S
Sbjct: 185 TGENGTVDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCS 244
Query: 286 NILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPT 345
N++++G+TI+AP+ +PNTDGI+PDS TN IED YI SGDD VA+KSGWD+YGIA P+
Sbjct: 245 NVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPS 304
Query: 346 KQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+++ R++ +P + + +GSEMSGGI ++ E++ N+ +GVRIK+ GRGGY+K++
Sbjct: 305 TNIIVSRVSGTTPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNV 364
Query: 406 YVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISG 465
+ + M +K + H D+ +DPKA+P + I ++++ N + A LEG+ G
Sbjct: 365 SISNIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKG 424
Query: 466 DPFTGICIANAT-IGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
F G+C N T +G+A W C + G T+GV P PC L + G
Sbjct: 425 SSFEGLCFKNITFLGVAL---SATWHCEYVAGFTNGVFPLPCPELQNNG 470
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/397 (46%), Positives = 266/397 (67%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R S+ FGG GDG+T NT AF A+ + + + GGA+LYVP G WLTG FNL S
Sbjct: 41 RGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVWLTGPFNLTSRM 100
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A + A+QD + WP+I+PLPSYGRGR+ GRY SLI G+ L DV++TG+NGTI
Sbjct: 101 TLFLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITGENGTI 160
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG WW + KG L YTRP+L+E M + +I +S++ +SP WN+HPVY SN++++ +
Sbjct: 161 DGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 220
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWDEYGIAYG P+ + +RR
Sbjct: 221 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRR 280
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A A+GSE SGG+++V AE + ++ G+ IKT GRGG+++++ V +T+
Sbjct: 281 ITGSSPF-AGFAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTL 339
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+++ + G+ G+H D Y+ ALP++ + +++ N+ A ++GI+ F+ IC
Sbjct: 340 DNVRYGLRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRIC 399
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + A + PW C + G V P PC L
Sbjct: 400 LSNVKLTGGAPVQ--PWKCEAVSGGALDVQPSPCTEL 434
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/397 (47%), Positives = 257/397 (64%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + SI +FGGVGDG+T NT AF A+ ++ GG L VPAG WLTGSFNL SH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A L A+Q+ WP+ +PLPSYGRGR+ RYTS I G L D+++TGD G I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGII 158
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + + L++TRP L+EFM++ I IS++ L NSP WN+HPVY N+++ +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
IIAP SPNTDG++PDS TN IED YI +GDD VA+KSGWDEYGIAYG P+ + IRR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ SP+S IA+GSE SGG+ +V ED N+ G+ IKT +GRGG++++I V + M
Sbjct: 279 VRGSSPFSG-IAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
++++ + G+ G H D H+ ALP + ++ +++ NV +EGI PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+AN + + W C D+ G GV P PC L
Sbjct: 398 LAN--VKLFGWRNNAAWKCRDVHGAALGVQPGPCAEL 432
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/436 (44%), Positives = 277/436 (63%), Gaps = 7/436 (1%)
Query: 71 RLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKT 130
+L + + LV +L++VA+ ES + NA R HS SI +FG VGDG T
Sbjct: 18 QLVAHMKSLVAVLLLVAI--STAVESNGEDNGGPCKQNAFKARPHSVSILEFGAVGDGIT 75
Query: 131 SNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNE 190
NT AF++A+ L ++ GGAQLYVP+GKWLTGSFNL SH TL+L + A ++ASQD +
Sbjct: 76 LNTVAFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLERGAIIIASQDYSH 135
Query: 191 WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKY 250
W ++ LPSYGRG GRY SLI+G NL+DV++TGDNGTIDGQG++WW+ F L Y
Sbjct: 136 WDIVDFLPSYGRG----IGRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWELFSSNSLNY 191
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
+RP L+EF+ + +I IS+LT L+SP+W +HPV+ SN+ +Q IT AP P T GI PDS
Sbjct: 192 SRPNLIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPDS 251
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
IE+ I +G D V +KSGWD+YGIAYG PT + I + S A +A GSEMS
Sbjct: 252 SRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEMS 311
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
GGI D+ AE + +N+ G+ +KT GRGGY++ I++ + + MTG G H D
Sbjct: 312 GGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHPD 371
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ YD ALP++ I +++++ N+S+A GI PF+ IC++N T ++++ W
Sbjct: 372 DKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSP-SWF 430
Query: 491 CADIGGMTSGVTPPPC 506
C+++ G + V P PC
Sbjct: 431 CSNVIGFSEDVIPEPC 446
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 280/407 (68%), Gaps = 7/407 (1%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SITDFGGVGDGKTSNT+AF+ A+ L ++++GGAQL VP G WL+GSFNL S+FTL+L
Sbjct: 73 SITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFNLTSNFTLFLQ 132
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +L S+DL+EWP+++PLPSYGRGR+ GR+ SLI G NLT+V++TG+NGTIDGQG
Sbjct: 133 RGAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGK 192
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW+ + L +TR +L+E NI IS+LTLLNSP W +HPVY SN++++ +TI+AP
Sbjct: 193 MWWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAP 252
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDS TN IEDCYI SGDD +AVKSGWD+YG+A P+ +VIRR++ +
Sbjct: 253 INAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTT 312
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + +GSEMSGGI ++ EDI ++ +G+RIKT GRGGY+ +I + + +K
Sbjct: 313 RTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKV 372
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ H+D+ +DPKALP ++GI ++V+ N A L G+ G F +C+ N T
Sbjct: 373 PIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVT 432
Query: 478 -IGMAAKHKKVPWTCADIGGMTSGVTPPPC-ELLPDQGPEKIRACDF 522
+G+ K W C D+ G S V P C +LL +G I C +
Sbjct: 433 LLGLPQTEK---WKCKDVSGYASDVFPLSCPQLLQKKG--SISQCSY 474
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 274/393 (69%), Gaps = 4/393 (1%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI DFGGVGDGKTSNT+ F+ A+ + +++ GG+QL VP G+WLTGSFNL S+FTL+L
Sbjct: 79 SIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNLTSNFTLFLE 138
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +L SQD EWP+I+PLPSYGRGR+ GR+ SLI G LT+VI+TG+NG+IDGQG
Sbjct: 139 EGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGK 198
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW+ + L++TR +L+E M + NI IS+LT NSP W +HPVY SN++V+ +TI+AP
Sbjct: 199 MWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAP 258
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGI P+ +++RR++ +
Sbjct: 259 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTT 318
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
P + + +GSEMSGGI +V +D+ ++ +GVRIKT +GRGGY+ +I + +TM +K
Sbjct: 319 PTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKI 378
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ H D +DP A+PV++G++ +++ N + A L+GI PF GIC+ N T
Sbjct: 379 PIRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVT 438
Query: 478 -IGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+G+A+ W C + G + V P PC L
Sbjct: 439 LVGLAS---STSWHCEFVSGFANEVFPMPCPQL 468
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 273/397 (68%), Gaps = 2/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI +FGGVGDGKTSNT+ F+ AI L ++ GGAQL VP G+W+TGSFNL S+F
Sbjct: 31 RKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLTSNF 90
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L SQD EWP+I+PLPSYGRGR+ GR+ SL+ G LT+V++TG+NGTI
Sbjct: 91 TLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTI 150
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW+ + L++TR +L+E M ++NI I++LT N+P W +HPVY SN++V+ +
Sbjct: 151 DGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDM 210
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGI P+ +V+RR
Sbjct: 211 TILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRR 270
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
++ +P + + +GSEMSGGI ++ ED+ ++ +GVRIKT GRGGY+ +I + +TM
Sbjct: 271 VSGTTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTM 330
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+K + H D +DPKA+PV++GI+ R++++ N + A LEG+ PF GIC
Sbjct: 331 ERVKVPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGIC 390
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ N + + + W C + G V P PC L
Sbjct: 391 MKN--VSLLGVVSSLSWHCEFVSGFADEVFPTPCPQL 425
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/394 (47%), Positives = 268/394 (68%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +I++FG VGDG T NT F++AI L ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 6 RPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHL 65
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
T++L KDA ++ +++++EWP+++PLPSYG+G D R+ SLI G N+TDV++TG+NG I
Sbjct: 66 TIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGII 125
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG WW F KL Y+RP+L+EF+ +++I IS+LTLLNSP+W +HPV+ SN++V +
Sbjct: 126 DGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDV 185
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P TDGI PDSC+N IED I D +++KSGWD YGI G P + I R
Sbjct: 186 TIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISR 245
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + A +A GSEMSGGI D+ + + + G+ KTA GRGGY++D+ + + M
Sbjct: 246 VDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQM 305
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A TG++ +H DNH+DP ALP+I I +++V N+S+A L GI+GDPFT IC
Sbjct: 306 EDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNIC 365
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
++N + +A + W+C++I G + V P PC
Sbjct: 366 LSNISFSLADSTQSSSWSCSNISGYSELVFPEPC 399
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/394 (47%), Positives = 259/394 (65%), Gaps = 1/394 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP G WLT SFNL SH
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLTSHL 95
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L K A ++ SQD W V+ PLPSYGRG + GRY SLI G L DV++TG+NGTI
Sbjct: 96 TLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGNNGTI 155
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DG G+ WW+ F L Y+RP+L+E + + ++ +S+LT LN+P++N+HPVY N+ + I
Sbjct: 156 DGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHIHNI 215
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
+I AP SP T GI PDS + IEDC I +G D +A+KSGWDEYGIAYG PT+ + IRR
Sbjct: 216 SIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRR 275
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + Y +T+A GS+MSGGI +V E + N++ G+ +T GRGGY+KDI + + M
Sbjct: 276 VHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEM 335
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A TG GSH D+ +DP ALP++ ++DI+ N+++A G+ PFT IC
Sbjct: 336 KNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNIC 395
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
++N T+ + W C+++ G + V P PC
Sbjct: 396 LSNITLSVNYA-SSTSWECSNVSGFSDSVLPIPC 428
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/398 (48%), Positives = 258/398 (64%), Gaps = 3/398 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + SITDFGGVGDG+T NT AF+ A+ ++ GG L+VPAG WLTGSFNL SH
Sbjct: 41 RPEAISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLTGSFNLTSHM 100
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A L A+QD WP+++PLPSYGRGR+ RY S I G L DV +TGD G I
Sbjct: 101 TLFLARGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLRDVAITGDKGVI 160
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + + L++TRP L+EFM++ I IS++ L NSP WN+HPVY N++V +
Sbjct: 161 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 220
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
I+AP SPNTDGI+PDS +N IED YI +GDD VA+KSGWDEYGIAYG P+ + IRR
Sbjct: 221 MILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 280
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ SP+S IA+GSE SGG++DV ED ++ G+ IKT VGRGGY++++ V + M
Sbjct: 281 VRGSSPFSG-IAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRM 339
Query: 413 HTMKWA-FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ + + G+ G H D H+ A+P++ + ++ NV LEGI PFT I
Sbjct: 340 SGVRISGVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRI 399
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
C++N + + W C D+ G GV P PC L
Sbjct: 400 CLSNVKL-FGWRKNDAAWRCRDVRGAALGVQPSPCAEL 436
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/403 (47%), Positives = 265/403 (65%), Gaps = 5/403 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SITDFG VGDGKT NTKAF++A+ L + GAQL +PAG+WLTGS NLISH
Sbjct: 19 RPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLISHL 78
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L A +L S+D N++P+I LPSYGRGR+ RY+SLI G NL DV +TG+NGTI
Sbjct: 79 TLFLENGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTI 138
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW+ F L Y+R +++E + + +I I +LT NSPSW +HPVY N++++ +
Sbjct: 139 DGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNL 198
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++ P SPNTDGI+PDS + IEDCYI GDD +++KSGWD+YGI+YGMP+K + IRR
Sbjct: 199 TVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRR 258
Query: 353 LTCISP---YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRG 409
+ S A ++ GSEMSGGI +V+ +D+ GVR KT+ GRGGY+K + V
Sbjct: 259 IVSASKTFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHN 318
Query: 410 MTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
+ +H++K A NYG H D++++ A PVI+ I ++IV +N++ A L+G+ PF
Sbjct: 319 LLLHSVKTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFR 378
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQ 512
I + TI + + K W C+ + G V P PC L Q
Sbjct: 379 HIHL--KTIALDVRSTKNVWNCSWVSGSYFFVVPQPCADLTRQ 419
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/408 (46%), Positives = 266/408 (65%), Gaps = 1/408 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP GKWLTGSFNL SH
Sbjct: 160 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 219
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L K A ++ +QD + W V++PLPSYGRG + GRY SLI G L DV+VTG+NGTI
Sbjct: 220 TLFLEKGAVIIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTI 279
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DG G +WW + L ++RP+L+E + +D + +S+LT LN+P++++HPVY S++ +Q +
Sbjct: 280 DGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNV 339
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
+I P SP T GI PDS N IEDC + G D +++KSGWDEYGIAYG PT+ + IRR
Sbjct: 340 SISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRR 399
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + + +A GS+MSGGI +V E N++SG+ +T GRGGY+K+I + + M
Sbjct: 400 VHLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQM 459
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ A TGN GSH D+ +DP ALP + I +D+ N+S+A + GI PFT IC
Sbjct: 460 ENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNIC 519
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC 520
++N T+ + + W C+++ G + V P PC L + + +C
Sbjct: 520 LSNITLSTNSV-SPITWECSNVSGFSDSVLPEPCPELGNPSYDSSSSC 566
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/398 (46%), Positives = 264/398 (66%), Gaps = 1/398 (0%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
A+ R H+ SI +FG VGDGKT NT AF++AI L ++ GGAQLYVP G WLT SFNL
Sbjct: 42 ALKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNL 101
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
SH TL+L K A +L SQD W V+ PLPSYGRG + GRY SL+ G L DV++TG+
Sbjct: 102 TSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLVNGYMLHDVVITGN 161
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
NG IDG G WW+ F L Y+RP+L+E + ++ + +S+LT LN+P++++HPVY SN+
Sbjct: 162 NGIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSIHPVYCSNVH 221
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
+ ++I AP SP T GI PDS + IEDC I +G D +++KSGWDEYGIAYG PT+ +
Sbjct: 222 IHNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENV 281
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
IRR+ + +TIA GS+MSGGI ++ E++ N++SG+ +T GRGGY+K+I +
Sbjct: 282 HIRRVHLQAYSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIIS 341
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+ M + A TG GSH D+ +DP ALP++ I +D++ N+++A G+ PF
Sbjct: 342 DIEMENIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPF 401
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
T IC++N T+ + + +PW C+++ G + V P PC
Sbjct: 402 TNICLSNVTLSINSV-SSIPWECSNVSGFSDSVLPKPC 438
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/397 (47%), Positives = 255/397 (64%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGVGDG+T NT AF+ A+ ++ GG L+VPAG WL GSFNL SH
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A L A+QD WP+++PLPSYGRGR+ RY S I G L DV++TGD G I
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVI 165
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + + L++TRP L+EFM++ I IS++ L NSP WN+HPVY N++V +
Sbjct: 166 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 225
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
I+AP SPNTDG++PDS +N IED YI +GDD VA+KSGWDEYGIAYG P+ + +RR
Sbjct: 226 MILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRR 285
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ SP+S IA+GSE SGG++DV ED ++ G+ IKT VGRGGY++++ V G+ +
Sbjct: 286 VRGSSPFSG-IAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRL 344
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
++ + G+ G H D H+ A+P + + ++ NV LEGI PFT IC
Sbjct: 345 TGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRIC 404
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + + W C D+ G GV P PC L
Sbjct: 405 LSN--VKLFGWRSDAAWKCRDVRGAALGVQPSPCAEL 439
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/397 (46%), Positives = 264/397 (66%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R S+ FGG GDG+T NT AF A+ + + ++ GGA+LYVP G WLTG FNL S
Sbjct: 40 RGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFNLTSRM 99
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A + A+QD + WP+I+PLPSYGRGR+ GRYTSLI G L DV++TG+NGTI
Sbjct: 100 TLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITGENGTI 159
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG+ WW + L YTRP+L+E M + +I +S++ +SP WN+HPVY SN++++ +
Sbjct: 160 DGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 219
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWDEYGIAYG + + +RR
Sbjct: 220 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRR 279
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A A+GSE SGG+++V AE + N+ G+ +KT GRGG++++I V +T+
Sbjct: 280 ITGSSPF-AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTL 338
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+++ + G+ G+H D+ Y+ ALP++ + +++ NV A ++GI F+ IC
Sbjct: 339 DNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRIC 398
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N A + PW C + G V P PC L
Sbjct: 399 LSNVKFTGGAPVR--PWKCEAVSGGALDVQPSPCTEL 433
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/397 (49%), Positives = 268/397 (67%), Gaps = 1/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGVGDGKT NTKAF+ AI ++ GG LY+P G +LTGSFNL SH
Sbjct: 38 RNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFLTGSFNLTSHM 97
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL + A + A+QD WP+I PLPSYGRGR+ GRY S I G L DV++TG+NGTI
Sbjct: 98 TLYLARGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHDVVITGENGTI 157
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + + L++TRP L+EF+ + I IS++ NSP WN+HPVY SN++++ +
Sbjct: 158 DGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYCSNVVIRFV 217
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR
Sbjct: 218 TILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRR 277
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A IA+GSE SGG++ V AE+I + G+ +KT +GRGG++++I + M
Sbjct: 278 ITGSSPF-AGIAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYM 336
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ + G+ G H D++Y+P ALPV++GI +R + +NV ++G+ PFTGIC
Sbjct: 337 KNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGIC 396
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + + PW C+D+ G V+P PC L
Sbjct: 397 LSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPCSEL 433
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/392 (47%), Positives = 267/392 (68%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
HS +I++FG VGDG T NT F++AI L ++ GGAQLYVP G+WLTGSFNL SH T+
Sbjct: 41 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 100
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L KDA ++ +++++EWP+++PLPSYG+G D R+ SLI G N+TDV++TG+NG IDG
Sbjct: 101 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDG 160
Query: 235 QGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
QG WW F KL Y+RP+L+EF+ +++I IS+LTLLNSP+W +HPV+ SN++V +TI
Sbjct: 161 QGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTI 220
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
+ +P TDGI PDSC+N IED I D +++KSGWD YGI G P + I R+
Sbjct: 221 RTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVD 280
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
+ A +A GSEMSGGI D+ + + + G+ KTA GRGGY++D+ + + M
Sbjct: 281 LQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMED 340
Query: 415 MKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIA 474
+ A TG++ +H DNH+DP ALP+I I +++V N+S+A L GI+GDPFT IC++
Sbjct: 341 VNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLS 400
Query: 475 NATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
N + +A + W+C++I G + V P PC
Sbjct: 401 NISFSLADSTQSSSWSCSNISGYSELVFPEPC 432
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 279/450 (62%), Gaps = 4/450 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFG 123
+ L+R+ S +LVP ++ + R +SR F A RA +AS+ +FG
Sbjct: 44 LALTRVPAFASS-GRLVPAALL-PIAPPRPHDSRSRDSCAGFYAGAGPSRAVTASVEEFG 101
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
VGDG T NT AF+ A+ +L + GGA+L VP G+WLTGSFNL S FTL+LH+ A +L
Sbjct: 102 AVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTSRFTLFLHRGAVIL 161
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
SQD EWP+I PLPSYGRGR+ R+ SLI G L DV++TG NGTIDGQG +WW+ +
Sbjct: 162 GSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQGNMWWELW 221
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
L +TR +L+E + + NI ISS+TL NSP W VHPVY SN++++ +TI+AP+ +PNT
Sbjct: 222 WNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDLTILAPLNAPNT 281
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGI+PDS + IEDCYI SGDD VAVKSGWD+YGI+ G P+ +VI+R++ +P + +
Sbjct: 282 DGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTPTCSGV 341
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
GSEMSGGI +V D+ N+ VR+KT VGRGGY+ +I + +TM +K +
Sbjct: 342 GFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIRFSR 401
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
H+D++YD ALP I + D+V ++ A LE + G + IC N ++ +
Sbjct: 402 GADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRGIRR 461
Query: 484 HKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
+ W C + G V P PCE G
Sbjct: 462 QDR--WHCESVYGEAHEVFPAPCEEFRKNG 489
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/408 (48%), Positives = 270/408 (66%), Gaps = 3/408 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGVGDGKT NTKAF++A+ ++ GG LY+P G +LT SFNL SH
Sbjct: 4 RNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLTSHM 63
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL + A + A+QD WP+I PLPSYGRGR+ GRY S I G L DVI+TG+NGTI
Sbjct: 64 TLYLARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGENGTI 123
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + + L +TRP L+EF+ + I IS++ NSP WN+HPVYS N++++ +
Sbjct: 124 DGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVIRYV 183
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP+ SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR
Sbjct: 184 TILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRR 243
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+S IA+GSE SGG+++V E++ N G+ IKT +GRGG++K+I V + M
Sbjct: 244 ITGSSPFSG-IAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYM 302
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
++ + G+ G H D+ ++P ALPV+ GI + I + V ++G+ PFTGIC
Sbjct: 303 ENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGIC 362
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRAC 520
++N + + PW C+D+ G V+P PC L P + +C
Sbjct: 363 LSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSEL--TSPHQTGSC 408
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/401 (47%), Positives = 259/401 (64%), Gaps = 2/401 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA SAS+ +FG VGDG TSNT AF+ A+ L + GGA+L VP G+W+TGSFNL S F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+LH A +L SQD EWP+I PLPSYGRGR+ R+ SLI G L DV++TG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + L +TR +L+E + + NI IS++TL NSP W VHPVY N++++ +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++AP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWD+YGI+ G P+ ++I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
++ +P + + GSEMSGGI +V D+ N+ VRIKT VGRGGY+ +I + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+K + H+D+ YD ALP I + RD+V ++ A LE + G + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
N ++ + + + W C + G V P PCE G
Sbjct: 436 FRNVSLTVIKRQDR--WHCESVYGEAHDVLPAPCEEFRRNG 474
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/401 (47%), Positives = 259/401 (64%), Gaps = 2/401 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA SAS+ +FG VGDG TSNT AF+ A+ L + GGA+L VP G+W+TGSFNL S F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+LH A +L SQD EWP+I PLPSYGRGR+ R+ SLI G L DV++TG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + L +TR +L+E + + NI IS++TL NSP W VHPVY N++++ +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++AP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWD+YGI+ G P+ ++I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
++ +P + + GSEMSGGI +V D+ N+ VRIKT VGRGGY+ +I + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+K + H+D+ YD ALP I + RD+V ++ A LE + G + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
N ++ + + + W C + G V P PCE G
Sbjct: 436 FRNVSLTVIKRQDR--WHCESVYGEAHDVLPAPCEEFRRNG 474
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/394 (48%), Positives = 266/394 (67%), Gaps = 3/394 (0%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSS-DGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++TDFGG+GDG+T NT+AF+ A+ ++S ++ GGAQL VPAG WLT FNL SH TL+L
Sbjct: 52 NLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFL 111
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+DA +LA+Q + WP+++PLPSYGRGR+ RY SLI G +L D+++TG NGTIDG G
Sbjct: 112 EEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNG 171
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW++ +LK+TR L++FM++ I+IS +TL NSP W VHP N+ ++G+TIIA
Sbjct: 172 RKWWEKAKLKQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIA 231
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P +PNTDGI+PDSC N IE+CYI GDD VAVKSGWD+YGI YG P + IR +
Sbjct: 232 PPDAPNTDGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVN 291
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
+P SA +++GSEMSGGI +V E++ N++ GVRIKT GRGGYV ++ R +TM T++
Sbjct: 292 APVSAGVSIGSEMSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVR 351
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +YG H D YDP ALPV++ I + I V + AR+ G P G+ I +
Sbjct: 352 VGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDM 411
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+G+ K K V + C+ + G G + P PCE L
Sbjct: 412 NVGVTRKKKHV-FQCSFLQGQVFGTIFPKPCEDL 444
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/401 (47%), Positives = 259/401 (64%), Gaps = 2/401 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA SAS+ +FG VGDG TSNT AF+ A+ L + GGA+L VP G+W+TGSFNL S F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+LH A +L SQD EWP+I PLPSYGRGR+ R+ SLI G L DV++TG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW + L +TR +L+E + + NI IS++TL NSP W VHPVY N++++ +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++AP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWD+YGI+ G P+ ++I+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
++ +P + + GSEMSGGI +V D+ N+ VRIKT VGRGGY+ +I + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+K + H+D+ YD ALP I + RD+V ++ A LE + G + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
N ++ + + + W C + G V P PCE G
Sbjct: 436 FRNVSLTVIKRQDR--WHCESVYGEAHDVLPAPCEEFRRNG 474
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 269/407 (66%), Gaps = 2/407 (0%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
Y RA +AS+ +FG VGDG TSNT AF+ A+ L + GGA+L VPAG+WLTGSF
Sbjct: 69 YRGAGRRAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSF 128
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S FTL+LH A +L SQD EWP+I PLPSYGRGR+ R+ SLI G +L DV++T
Sbjct: 129 NLTSRFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVIT 188
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G NGTIDGQG +WW+ + L +TR +L+E + + N+ IS++TL NSP W VHPVY N
Sbjct: 189 GSNGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRN 248
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
++++ +TI+AP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWD+YGI+ G P+
Sbjct: 249 VVIKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSS 308
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
++I+R++ +P + + GSEMSGGI +V D+ N+ S VR+KT VGRGGY+ +I
Sbjct: 309 NIIIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNIT 368
Query: 407 VRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
+ +TM +K + H+D+ YD ALP+I GI+ DIV +V A LE + G
Sbjct: 369 IANVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGA 428
Query: 467 PFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
+ GIC N + + A ++V W C + G V P PCE L + G
Sbjct: 429 VYEGICFRN--VSLRAIRRQVRWQCESVYGEAHEVFPAPCEELRNNG 473
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 275/393 (69%), Gaps = 4/393 (1%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SITDFGGVGDGKTSNT+AF+ AI + ++ GG++L VP G W+TGSFNL S+FTL+L
Sbjct: 71 SITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQ 130
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +LASQD +EWP+I+PLPSYGRGR+ GR+ SLI G L++V++TG+NGTIDGQG
Sbjct: 131 RGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGK 190
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW+ + L +TR +L+E + + NI IS+LT NSP W +HPVY SN++++ +TI+AP
Sbjct: 191 MWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAP 250
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGI P+ +VIRR++ +
Sbjct: 251 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTT 310
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
P + + +GSEMSGGI ++ ED+ ++ +G+RIK+ GRGGY+ ++ + M+ +K
Sbjct: 311 PTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKM 370
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
A + H D +DPKA+P ++GI ++++ N + A L GI+G + G+C+ N T
Sbjct: 371 AIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVT 430
Query: 478 I-GMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
I G+ K W CA + G ++ V P PC L
Sbjct: 431 ILGLTPSAK---WHCAFVSGFSTSVFPTPCPQL 460
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 273/401 (68%), Gaps = 4/401 (0%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
+ + R SI DFGGVGDG TSNT+ F+ AI + + + GG+QL VP G+W+TGSF
Sbjct: 56 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 115
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S+FTL+L + A +L SQDL +WP+I+PLPSYGRGR+ GR+ SLI G L +V++T
Sbjct: 116 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 175
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G NGTIDGQG +WW+ + L++TR +L+E + NI IS+LT +NSP W +HPVY SN
Sbjct: 176 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 235
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
++++ +TI+AP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGIA P+
Sbjct: 236 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 295
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+++RRL+ +P + + +GSEMSGGI +V ED+ ++ +GVRIKT GRGGYV +I
Sbjct: 296 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 355
Query: 407 VRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
+ + M +K + H D+ +DPKA+P I+GI ++V+ N + A LEGI G
Sbjct: 356 INNIRMERVKVPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 415
Query: 467 PFTGICIANAT-IGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
P+ GIC+ N T +G+A K W C + G T V P C
Sbjct: 416 PYEGICMKNVTLLGLAPAAK---WHCEFVSGFTDAVFPVSC 453
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 273/401 (68%), Gaps = 4/401 (0%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
+ + R SI DFGGVGDG TSNT+ F+ AI + + + GG+QL VP G+W+TGSF
Sbjct: 67 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S+FTL+L + A +L SQDL +WP+I+PLPSYGRGR+ GR+ SLI G L +V++T
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G NGTIDGQG +WW+ + L++TR +L+E + NI IS+LT +NSP W +HPVY SN
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
++++ +TI+AP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGIA P+
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+++RRL+ +P + + +GSEMSGGI +V ED+ ++ +GVRIKT GRGGYV +I
Sbjct: 307 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 366
Query: 407 VRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
+ + M +K + H D+ +DPKA+P I+GI ++V+ N + A LEGI G
Sbjct: 367 INNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 426
Query: 467 PFTGICIANAT-IGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
P+ GIC+ N T +G+A K W C + G T V P C
Sbjct: 427 PYEGICMKNVTLLGLAPAAK---WHCEFVSGFTDAVFPVSC 464
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 273/401 (68%), Gaps = 4/401 (0%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
+ + R SI DFGGVGDG TSNT+ F+ AI + + + GG+QL VP G+W+TGSF
Sbjct: 67 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S+FTL+L + A +L SQDL +WP+I+PLPSYGRGR+ GR+ SLI G L +V++T
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G NGTIDGQG +WW+ + L++TR +L+E + NI IS+LT +NSP W +HPVY SN
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
++++ +TI+AP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGIA P+
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+++RRL+ +P + + +GSEMSGGI +V ED+ ++ +GVRIKT GRGGYV +I
Sbjct: 307 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 366
Query: 407 VRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
+ + M +K + H D+ +DPKA+P I+GI ++V+ N + A LEGI G
Sbjct: 367 INNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 426
Query: 467 PFTGICIANAT-IGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
P+ GIC+ N T +G+A K W C + G T V P C
Sbjct: 427 PYEGICMKNVTLLGLAPAAK---WHCEFVSGFTDAVFPVSC 464
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/427 (45%), Positives = 273/427 (63%), Gaps = 7/427 (1%)
Query: 80 VPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDA 139
V +L++VA+ ES + NA+ R HS SI +FG VGDG T NT AF++A
Sbjct: 72 VAVLLLVAI--STAVESNGEDNGGPCKQNALKARPHSVSILEFGAVGDGITLNTVAFENA 129
Query: 140 INQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
I L ++ GGAQLYVP+G WLTGSFNL +H TL+L + A ++ASQD + W ++ LPS
Sbjct: 130 IFYLKSFADKGGAQLYVPSGTWLTGSFNLTNHLTLFLERGATIIASQDYSHWDIVDFLPS 189
Query: 200 YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFM 259
YGRG GRY SLI+G NL+DV++TGDNGTIDGQG++WW+ F+ L YTRP L+EF+
Sbjct: 190 YGRG----IGRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWKLFNSNSLNYTRPNLIEFV 245
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ ++ IS+LT L+SP+W +HPVY SN+ +Q IT AP P T GI PDS N IE+
Sbjct: 246 DSVDVIISNLTFLDSPAWGIHPVYCSNVQIQNITYRAPAEFPYTSGIVPDSSQNVCIENS 305
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
I +G D + +KSGWD+YGIAYG PT + I + S A +A GSEMSGGI + AE
Sbjct: 306 NISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGAGLAFGSEMSGGISVIIAE 365
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALP 439
+ +N+ G+ +KT GRGGY++ I++ + + MTG G H D+ YD +LP
Sbjct: 366 KLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYDTSSLP 425
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTS 499
V+ I +++++ N+S+A GI PF+ IC++N T ++++ W C+++ G +
Sbjct: 426 VVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSP-SWFCSNVIGFSE 484
Query: 500 GVTPPPC 506
V P PC
Sbjct: 485 HVIPEPC 491
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 267/397 (67%), Gaps = 1/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGG+GDG+T NT+AF+ AI ++ GG LY+P G +LT +FNL SH
Sbjct: 37 RNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHM 96
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL K A + A QD + WPVI PLPSYGRGR+ GRY SLI G + DV++TG+NGTI
Sbjct: 97 TLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTI 156
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG WW + G LKYTRP L+EF+ + NI IS++ LNSP WN+HPVY N++V+ +
Sbjct: 157 DGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYV 216
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDG++PDS N IED YI +GDD VAVKSGWDEYGIAYG + + IRR
Sbjct: 217 TILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRR 276
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
++ SP+ A +A+GSE SGG+ +V AE + + G+ IKT +GRGG++K+I V + M
Sbjct: 277 ISGSSPF-AGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYM 335
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ + G+ G H D+ +DP ALP+++ I ++I NV A + G+ PFTGIC
Sbjct: 336 ENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGIC 395
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + A + + VPWTC+ + G S V+P PC L
Sbjct: 396 LSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSEL 432
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/394 (48%), Positives = 265/394 (67%), Gaps = 3/394 (0%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSS-DGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++TDFGG+GDG+T NT+AF+ A+ ++S ++ GGAQL VPAG WLT FNL SH TL+L
Sbjct: 52 NLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFL 111
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+DA +LA+Q + WP+++PLPSYGRGR+ RY SLI G +L D+++TG NGTIDG G
Sbjct: 112 EEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNG 171
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW++ + +LK+TR L++ M++ I+IS +TL NSP W VHP N+ ++G+TIIA
Sbjct: 172 RKWWEKAKRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIA 231
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P +PNTDGI+PDSC N IE CYI GDD VAVKSGWD+YGI YG P + IR +
Sbjct: 232 PPDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVN 291
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
+P SA +++GSEMSGGI +V E++ N++ GVRIKT GRGGYV ++ R +TM T++
Sbjct: 292 APVSAGVSIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVR 351
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +YG H D YDP ALPV++ I + I V + AR+ G P G+ I +
Sbjct: 352 VGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDM 411
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+G+ K K V + C+ + G G + P PCE L
Sbjct: 412 NVGVTRKKKHV-FQCSFLQGEVFGTIFPKPCEDL 444
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/392 (49%), Positives = 269/392 (68%), Gaps = 2/392 (0%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI DFGGVGDGKTSNT+AF+ A+ + + GGAQL VP G+W+TGSFNL S+FTL+L
Sbjct: 2 SIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFLE 61
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +L SQD EWP+I+PLPSYGRGR+ GR+ SLI G L +V++TG+NGTIDGQG
Sbjct: 62 EGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQGK 121
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW+ + L++TR +L+E M + +I IS+LT NSP W +HP+Y SN++V+ +TI+AP
Sbjct: 122 MWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILAP 181
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGI P+ ++IRR++ +
Sbjct: 182 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTT 241
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
P + + +GSEMSGGI +V ED+ ++ +GVRIKT GRGGY+ +I + +TM +K
Sbjct: 242 PTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKI 301
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ H D +DPKA+PV++G++ ++V+ N + A LEGI PF GIC+ N
Sbjct: 302 PIRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKN-- 359
Query: 478 IGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
I + W C + G + V P PC L
Sbjct: 360 ISLLGVVSSPSWRCEFVSGFANDVFPTPCPQL 391
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/238 (77%), Positives = 206/238 (86%), Gaps = 4/238 (1%)
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDG++PDSCTNTRIED +IVSGDDCVAVKSGWDEYGI+YGMPTKQLVIRRLTCISPYSA
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
IALGSEMSGGI+DVRAEDI AINTESG+RIKTA+GRGGYVKDIYVRGM MHTMKWAFWM
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 423 GNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
GNYGSH D HYDPKA P+I GINYRDIVA+NV+M A+L+GI G+PFTGICI+NATI MA
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 483 KHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKCTYR 540
+ KK PWTC+DI G+TSGVTP PC +LP + C FP SLPI+ V+ KKC YR
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGMLPAE----TTTCHFPERSLPIEEVKFKKCIYR 234
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/397 (47%), Positives = 255/397 (64%), Gaps = 4/397 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGV DG T NTKAF+ AI+ + + GGA LY+P GKWLTG FNL SH
Sbjct: 55 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 114
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +DA +LAS+D +WPV+ PLPSYGRGR+ RYTSL+ G +TDV +TG+NGTI
Sbjct: 115 TLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGTI 174
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW +F L++TR L+EFM++ NI + ++TL+NSP W +HPVY+S+++++G+
Sbjct: 175 DGQGLIWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGV 234
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP +PNTDG++PDS +N I D YI +GDD VAVKSGWDEYG+A+ P+ + +
Sbjct: 235 TILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVN 294
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
LT S I+LGSEMSGGI +V A + G+ IKT+ GRG Y+++ +
Sbjct: 295 LTVSG--SHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEI 352
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
AF TG YG H D Y+ A I+ I++RD+V V+ A G+ PF C
Sbjct: 353 LDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTC 412
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ + + K W C+ I G + V+PPPC L
Sbjct: 413 FTDVALELNGKSNH--WNCSYIEGYSRHVSPPPCPEL 447
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/397 (47%), Positives = 255/397 (64%), Gaps = 4/397 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGV DG T NTKAF+ AI+ + + GGA LY+P GKWLTG FNL SH
Sbjct: 26 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 85
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +DA +LAS+D +WPV+ PLPSYGRGR+ RYTSL+ G +TDV +TG+NGTI
Sbjct: 86 TLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGTI 145
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW +F L++TR L+EFM++ NI + ++TL+NSP W +HPVY+S+++++G+
Sbjct: 146 DGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGV 205
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP +PNTDG++PDS +N I D YI +GDD VAVKSGWDEYG+A+ P+ + +
Sbjct: 206 TILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVN 265
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
LT S I+LGSEMSGGI +V A + G+ IKT+ GRG Y+++ +
Sbjct: 266 LTVSG--SHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEI 323
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
AF TG YG H D Y+ A I+ I++RD+V V+ A G+ PF C
Sbjct: 324 LDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTC 383
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ + + K W C+ I G + V+PPPC L
Sbjct: 384 FTDVALELNGKSNH--WNCSYIEGYSRHVSPPPCPEL 418
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 270/401 (67%), Gaps = 1/401 (0%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
A+ R + SIT+FGGVGDG+T NTKAF++AI ++ +GG LYVP G +LT FNL
Sbjct: 35 ALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNL 94
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
SH TLYL A ++A+QD WP+I PLPSYGRGR+ GRY S I G + DV++TG+
Sbjct: 95 TSHMTLYLAAGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRYMSFIHGDGVQDVVITGE 154
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
NGTIDGQG WW ++ +G L++TRP L+EF+ + +I IS++ NSP WN+HPVY SN++
Sbjct: 155 NGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVV 214
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
V+ +TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ +
Sbjct: 215 VRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDI 274
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
IRR+T SP+ A IA+GSE SGG+++V AE I N G+ IKT GRGG++K+I +
Sbjct: 275 TIRRITGSSPF-AGIAIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMS 333
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+ M + ++G+ G H D+ +D ALP+++G+ +++ V A ++G+ PF
Sbjct: 334 HVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPF 393
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
T IC+ + + + PW C+D+ G V+P PC L
Sbjct: 394 TDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSPWPCSEL 434
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/397 (47%), Positives = 255/397 (64%), Gaps = 2/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS S+ DFG VG GKT N AF++AI L ++ GGAQ VPAGKWLT S N +
Sbjct: 65 RPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGKWLTRSINFTCTY 124
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
T+ L KDA +LAS+D + W V++ LPSYGRG +A GRY SLI G NLTDV++TG+NGTI
Sbjct: 125 TV-LEKDAVILASEDFDHWDVVEALPSYGRGIEAQYGRYRSLISGNNLTDVVITGNNGTI 183
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW++F+ L YTRP+L+EF+ + N+ IS+LTLLN+P WN+ P Y SN+++Q +
Sbjct: 184 DGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIRPAYCSNVVIQNL 243
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T+ P SP T+GI PDS + IE+ I G D + +KSGWDEYGI+YG PT + IRR
Sbjct: 244 TVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRR 303
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S A +ALGSEMSGGI DV E ++ G+ +KTA GRGG++KDI + + M
Sbjct: 304 VRLQSAAGAGVALGSEMSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVM 363
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
++ TG H D YDP +LP + GI + DIV N+S+A G+S PFT
Sbjct: 364 DNLQVGIKATGYSDMHPDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFT-SI 422
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ + PW C++I G + V+P PC L
Sbjct: 423 CLSNISISISSDPSTPWLCSNISGSSKNVSPEPCPEL 459
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/439 (43%), Positives = 274/439 (62%), Gaps = 5/439 (1%)
Query: 71 RLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKT 130
R V + L + V L S R+ R E R HS +IT+FG VG+G+T
Sbjct: 2 RFLVLVDVFLALTLAVVLGSAHSGGGRQWR-----EQAPPGSRPHSVTITEFGAVGNGRT 56
Query: 131 SNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNE 190
NT F++A+ ++ GGAQLYVP G+WLTGSFNL SH TL+L + A ++ +++ ++
Sbjct: 57 LNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFLEEGAVIIGAKESSQ 116
Query: 191 WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKY 250
WP+++PLPSYG+G D R+ SLI G N+TDV++TG+NG I+GQG++WW H +L +
Sbjct: 117 WPIVEPLPSYGQGLDLPGPRHLSLINGYNVTDVVITGNNGVINGQGSIWWDWLHSHELNH 176
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
+RP+L+EF++++ I IS+LT LNSP+W++HPVY S + V +TI +P TDGI PDS
Sbjct: 177 SRPHLVEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPDS 236
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
+N IED I D +++KSGWD+YGI+ G P + I R+ + A +A GSEMS
Sbjct: 237 SSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEMS 296
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
GGI D+ A++I+ + G+ KT GRGGY+ ++ + + M + A TGN+ SH D
Sbjct: 297 GGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHPD 356
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+DP LPVI I +D+V N+S+A L GI GDPFT IC++N MA W+
Sbjct: 357 EDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSWS 416
Query: 491 CADIGGMTSGVTPPPCELL 509
C+++ G + V P PC L
Sbjct: 417 CSNVSGYSESVFPEPCSEL 435
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/398 (48%), Positives = 259/398 (65%), Gaps = 4/398 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQL-SQYSSDGGAQLYVPAGKWLTGSFNLISH 171
R SI+DFG VGDGKT NTKAF AI+++ + +S+ G LYVP G +LT SFNL SH
Sbjct: 41 RNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSH 100
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TLYL A + A QD +WP+ PLPSYGRGR+ RY S I G L DV++TG NGT
Sbjct: 101 MTLYLADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGT 160
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
IDGQG WW + G LK+TRP L+EF + NI +S + L NSP W +HPVY SN++V
Sbjct: 161 IDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHH 220
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+TI+AP S NTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAY P++ + IR
Sbjct: 221 VTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIR 280
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R+T SP+ A IA+GSE SGGIQ+V E+I N+ G+ IKT +GRGG ++ I + G+
Sbjct: 281 RITGSSPF-AGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVY 339
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ ++ ++G+ G H D+ ++ ALP+++GI +++ V A ++G+ PFT +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
C +N T + + W C+D+ G V P PC L
Sbjct: 400 CFSNVT--LTGTKRSPIWKCSDVVGAADKVNPTPCPEL 435
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/399 (45%), Positives = 266/399 (66%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG+T NT F++A+ + ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 30 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 89
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
T+YL + A ++ ++D ++WP+++PLPSYG+G D R+ SLI G NLTDV++TG+NG I
Sbjct: 90 TIYLEQGAVIVGAKDSSQWPIVEPLPSYGQGTDLPGPRHRSLINGYNLTDVVITGNNGVI 149
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WWQ +L ++RP+L+EF+Y+++I IS+LT LNSP+W++HPVY SN+ V +
Sbjct: 150 DGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 209
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P TDGI PDSC+N IED I + +++KSGWD+YGI++G PT + I R
Sbjct: 210 TIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISR 269
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ +S A +A GSEMSGGI D+ ++ ++ G+ KT+ GRGGY++++ + + M
Sbjct: 270 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQM 329
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ TGN +H D+ +D LP I + +++V N+S+A L GI PFT IC
Sbjct: 330 ENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAIC 389
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPD 511
++N MAA W+C+++ G + V P PC L D
Sbjct: 390 LSNLNFSMAADTGSSSWSCSNVSGYSEAVFPEPCTELRD 428
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/400 (46%), Positives = 263/400 (65%), Gaps = 2/400 (0%)
Query: 111 SCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLIS 170
+ R H ++TDFG VGDG + NT+ F+DAI + + +SDGGAQL V G+WLT FN+ S
Sbjct: 31 NLRPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTS 90
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
H TL+L + A ++A QD WP++ LPSYGRGR+ RY+SLI G ++ D ++TG NG
Sbjct: 91 HMTLFLSRGATIVAIQDAGLWPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNG 150
Query: 231 TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
+IDGQG WW+Q + +L+YTR L+E M++ NI IS +TL NSP W++HP +N+ +
Sbjct: 151 SIDGQGGWWWEQHKQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTIS 210
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
G+TI+AP+ +PNTDGI+PDSC N +E+CYI GDD VAVKSGWD+YGI Y P + I
Sbjct: 211 GVTILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTI 270
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
R + S SA I++GSEMSGG++ V ED+ + G+RIKT+ GRGGYVK+I + +
Sbjct: 271 RNVIARSQISAGISIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNL 330
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
T+ ++ + +YG H D +DPKALPV+ I++ + +V R+ G P TG
Sbjct: 331 TLIDVRVGIVVKTDYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITG 390
Query: 471 ICIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
I I N +G+ K + V +TC + G G V P PC+ L
Sbjct: 391 IDIRNMNVGLTRKKRNV-FTCDFLQGRVVGKVFPSPCKAL 429
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/397 (46%), Positives = 260/397 (65%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R S+ FGG GDG+T NT AF A+ + + + GG LYVP G WLTG FNL SH
Sbjct: 42 RGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFNLTSHM 101
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A + A+QD + WP+I PLPSYGRGR+ RY SLI G L DV +TG NGTI
Sbjct: 102 TLFLSRGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITGANGTI 161
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW + KG L +TRP+L+E M + ++ +S+L +SP WN+HPVY SN++++ +
Sbjct: 162 DGQGSVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNVVIRNL 221
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS +N IEDCYI +GDD VA+KSGWDEYGIAYG P+ + +RR
Sbjct: 222 TILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRR 281
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A A+GSE SGG+++V AE + ++ GV IKT GRGG+++++ V +T+
Sbjct: 282 ITGSSPF-AGFAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTL 340
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+++ + G+ G H D HY+ ALP + + +++ N+ A ++GI+ F+ IC
Sbjct: 341 DNVRYGLRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRIC 400
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N I + PW C + G + P PC L
Sbjct: 401 LSN--IKLHGSVPVRPWKCESVSGGALDLQPSPCTEL 435
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/397 (45%), Positives = 257/397 (64%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R S+ FGGVGDG+ NT AF A+ ++ + + GGA LYVPAG WLTG FNL SH
Sbjct: 44 RGAWISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A + A+QD + WP+I PLPSYGRGR+ GRY SLI G L DV +TG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTI 163
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW + K L +TRP+L+E + + ++ IS++ +SP WN+HPVY SN+++ +
Sbjct: 164 DGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNV 223
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++AP SPNTDGI+PDS +N IED YI +GDD +++KSGWDEYGIA+G P+ + IRR
Sbjct: 224 TVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRR 283
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T P+ A A+GSE SGG+++V E + G+ +KT GRGG++++I V +T+
Sbjct: 284 ITGSGPF-AGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTL 342
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ ++ + G+ G H D YDP LPV+ G+ +++ N+ A + GI F+ IC
Sbjct: 343 NGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRIC 402
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + + PW C + G V P PC L
Sbjct: 403 LSN--VKLYGGDSVGPWKCRAVSGGALDVQPSPCAEL 437
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/397 (45%), Positives = 257/397 (64%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R S+ FGGVGDG+ NT AF A+ ++ + + GGA LYVPAG WLTG FNL SH
Sbjct: 44 RGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A + A+QD + WP+I PLPSYGRGR+ GRY SLI G L DV +TG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTI 163
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW + K L +TRP+L+E + + ++ IS++ +SP WN+HPVY SN+++ +
Sbjct: 164 DGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNV 223
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T++AP SPNTDGI+PDS +N IED YI +GDD +++KSGWDEYGIA+G P+ + IRR
Sbjct: 224 TVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRR 283
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T P+ A A+GSE SGG+++V E + G+ +KT GRGG++++I V +T+
Sbjct: 284 ITGSGPF-AGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTL 342
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ ++ + G+ G H D YDP LPV+ G+ +++ N+ A + GI F+ IC
Sbjct: 343 NGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRIC 402
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + + PW C + G V P PC L
Sbjct: 403 LSN--VKLYGGDSVGPWKCRAVSGGALDVQPSPCAEL 437
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/243 (75%), Positives = 212/243 (87%), Gaps = 1/243 (0%)
Query: 64 MELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRL-DSFEYNAISCRAHSASITDF 122
MEL +R QV +LV +++V LLS AESRK + + SF+Y AI+CR HSAS+TDF
Sbjct: 1 MELLWKDHMRVQVIRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASLTDF 60
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
GGVGDGKTSNTKAF+ AI+ LSQY+S GGAQLYVPAGKWLTGSF+LISHFTLYL+KDA L
Sbjct: 61 GGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAVL 120
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
LASQD++EWP I+PLPSYGRGRDA AGRYTSLIFGTNLTDVIVTG NGTIDGQGA WWQ+
Sbjct: 121 LASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQK 180
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
FHK KLKYTRPYL+E M++D IQIS+LTLLNSPSWN+HPVYSSNI+++G+TIIAPV SPN
Sbjct: 181 FHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPN 240
Query: 303 TDG 305
TDG
Sbjct: 241 TDG 243
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/392 (47%), Positives = 268/392 (68%), Gaps = 2/392 (0%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI DFGGVGDGKTSNT++F+ AI + ++ + GGAQL +P G WLTGSFNL S+FTL+LH
Sbjct: 76 SIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTSNFTLFLH 135
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A +LASQD EWP+I+PLPSYGRGR+ GR+ SLI G +++V++TG NGT+DGQG
Sbjct: 136 HGAVILASQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTVDGQGR 195
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW+ + L++TR +L+E + +DN+ IS+LT NSP W +HPVY SN++V+G+TI+AP
Sbjct: 196 MWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGMTILAP 255
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDS TN IED YI SGDD VA+KSGWD YGI P+ +++RR++ +
Sbjct: 256 LNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTT 315
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
P + + +GSEMSGGI ++ E++ ++ +GVRIK+ GRGGY+ ++ + + M +K
Sbjct: 316 PTCSGVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKI 375
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ H D+ +DPKA+P + I ++V+ N + A LEG+ G F G+C N T
Sbjct: 376 PIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNIT 435
Query: 478 IGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ A + W C + G + V P PC L
Sbjct: 436 LHGVALSAR--WRCEYVSGFATEVFPVPCPEL 465
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/404 (46%), Positives = 256/404 (63%), Gaps = 1/404 (0%)
Query: 105 FEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ-LYVPAGKWLT 163
F A R AS+ +FG VGDG T NT AF+ A+ +L + GG L VP G+WLT
Sbjct: 76 FYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLT 135
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
GSFNL S FTL+LH+ A +L SQD EWP+I PLPSYGRGR+ R+ SLI G L DV
Sbjct: 136 GSFNLTSRFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDV 195
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
++TG NGTIDGQG +WW+ + L +TR +L+E + + N+ ISS+TL NSP W VHPVY
Sbjct: 196 VITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVY 255
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
SN++++ +TI+AP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWD+YGI++G
Sbjct: 256 CSNVVMKDLTILAPLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGK 315
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
P+ +VI+R++ +P + + GSEMSGGI +V D+ N+ VR+KT VGRGGY+
Sbjct: 316 PSTNIVIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYIT 375
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
+I + + M +K + H D+ YDP ALP I + D+V ++ A LE +
Sbjct: 376 NITIASVAMEKVKVPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAV 435
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE 507
G + GIC N + + + W C + G V P PCE
Sbjct: 436 PGAVYEGICFRNFSFRGIRRQQDSRWHCESVYGEAHDVFPAPCE 479
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/437 (44%), Positives = 270/437 (61%), Gaps = 13/437 (2%)
Query: 75 QVTKLVPLLIVVALLSQRG--AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSN 132
QV + L + L+S G A ++ +LD R HS SI +FG VGDGKT N
Sbjct: 2 QVALVWLLAFTILLISGEGNNAICKENFKLDP--------RPHSVSILEFGAVGDGKTLN 53
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T AF++A+ L ++ GGAQLYVP GKWLTGSFNL SH TL+L K A +LAS D + W
Sbjct: 54 TIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWD 113
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTR 252
V+ PLPSYGRG + RY SLI G NL DV++TG+NGT DGQGA WW+ G L Y+R
Sbjct: 114 VVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSR 173
Query: 253 PYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCT 312
P+++EF+ + +I IS+LT LN+P+ N+HPVY S I ++ + I V SP+ G+ PDS
Sbjct: 174 PHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSD 233
Query: 313 NTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG 372
N IED I G D V++KSGWD+YGI YG PT + IR L SP A I+ GSEMSGG
Sbjct: 234 NVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGG 293
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
+ DV E + ++ GV +T GRGGY+++I + + + ++ A G+ GSH D+
Sbjct: 294 VSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDK 353
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
+D ALPV+ I R+ ++ +A L GI PFT IC+A+ + ++ W C+
Sbjct: 354 FDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEES---WICS 410
Query: 493 DIGGMTSGVTPPPCELL 509
++ G + V+P PC+ L
Sbjct: 411 NVSGFSDDVSPEPCQEL 427
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/399 (46%), Positives = 263/399 (65%), Gaps = 3/399 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + ++TDFGGVGDG T NT+AFK A++ +S++ GGAQL VP G+WLT FNL SH
Sbjct: 69 RPMAFNLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHM 128
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +DA +L D WP++ PLPSYG GR+ RY SLI G +L DV++TG NGTI
Sbjct: 129 TLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTI 188
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
+GQG WW+++ + +L +TR L++ M++ +I I+++TL +SP W +HP NI ++G+
Sbjct: 189 NGQGQTWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNITIKGV 248
Query: 293 TIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+APV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAYG P+ ++IR
Sbjct: 249 TILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIR 308
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
L S SA I++GSEMSGG+ +V E+I ++ GVRIKTA GRG YV+ I R +T
Sbjct: 309 NLVVRSMVSAGISIGSEMSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNIT 368
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ M +Y H D+ YDP ALP+++ I++ + V + R+ G P +
Sbjct: 369 FENVRVGIVMKTDYNEHPDDGYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNV 428
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+ ++G+ K K + + CA + G G + P PCE L
Sbjct: 429 TFQDMSVGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENL 466
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/431 (45%), Positives = 268/431 (62%), Gaps = 8/431 (1%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKD 138
LV LL LL E A ++F+ + R HS SI +FG VGDGKT NT AF++
Sbjct: 5 LVWLLAFTILLIS--GEGNNAICKENFKLDP---RPHSVSILEFGAVGDGKTLNTIAFQN 59
Query: 139 AINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
A+ L ++ GGAQLYVP GKWLTGSFNL SH TL+L K A +LAS D + W V+ PLP
Sbjct: 60 AVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLP 119
Query: 199 SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEF 258
SYGRG + RY SLI G NL DV++TG+NGT DGQGA WW+ G L Y+RP+++EF
Sbjct: 120 SYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEF 179
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+ + +I IS+LT LN+P+ N+HPVY S I ++ + I V SP+ G+ PDS N IED
Sbjct: 180 VSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIED 239
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
I G D V++KSGWD+YGI YG PT + IR L SP A I+ GSEMSGG+ DV
Sbjct: 240 STINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTV 299
Query: 379 EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
E + ++ GV +T GRGGY+++I + + + ++ A G+ GSH D+ +D AL
Sbjct: 300 ERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVTNGHTGSHPDDKFDRDAL 359
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PV+ I R+ ++ +A L GI PFT IC+A+ + ++ W C+++ G +
Sbjct: 360 PVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEES---WICSNVSGFS 416
Query: 499 SGVTPPPCELL 509
V+P PC+ L
Sbjct: 417 DDVSPEPCQEL 427
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/397 (46%), Positives = 262/397 (65%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI FGG GDG+T NT AF A+ +++ + GGA LYVP G WLTG F+L SH
Sbjct: 44 RGAWMSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHM 103
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A + A+QD + WP+I PLPSYGRGR+ RY SLI G L DV +TG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTI 163
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW + KG L +TRP+L+E M + N +S+L +SP WN+HPVY SN++++ +
Sbjct: 164 DGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNL 223
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWDEYGIAYG P+ + IRR
Sbjct: 224 TILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRR 283
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A ++GSE SGG+++V AE + ++ GV IKT GRGG++++I V + +
Sbjct: 284 ITGSSPF-AGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVIL 342
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+++ + G+ G H D Y+ ALP++ + +++ N+ A ++GI F+ IC
Sbjct: 343 DNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRIC 402
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + +A + PW C + G V P PC L
Sbjct: 403 LSNIKLHGSAPVR--PWKCQAVSGGALDVQPSPCTEL 437
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/431 (45%), Positives = 268/431 (62%), Gaps = 8/431 (1%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKD 138
LV LL LL E A ++F+ + R HS SI +FG VGDGKT NT AF++
Sbjct: 7 LVWLLAFTILLIS--GEGNNAICKENFKLDP---RPHSVSILEFGAVGDGKTLNTIAFQN 61
Query: 139 AINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
A+ L ++ GGAQLYVP GKWLTGSFNL SH TL+L K A +LAS D + W V+ PLP
Sbjct: 62 AVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLP 121
Query: 199 SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEF 258
SYGRG + RY SLI G NL DV++TG+NGT DGQGA WW+ G L Y+RP+++EF
Sbjct: 122 SYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEF 181
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+ + +I IS+LT LN+P+ N+HPVY S I ++ + I V SP+ G+ PDS N IED
Sbjct: 182 VSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIED 241
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
I G D V++KSGWD+YGI YG PT + IR L SP A I+ GSEMSGG+ DV
Sbjct: 242 STINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTV 301
Query: 379 EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
E + ++ GV +T GRGGY+++I + + + ++ A G+ GSH D+ +D AL
Sbjct: 302 ERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDRDAL 361
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PV+ I R+ ++ +A L GI PFT IC+A+ + ++ W C+++ G +
Sbjct: 362 PVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEES---WICSNVSGFS 418
Query: 499 SGVTPPPCELL 509
V+P PC+ L
Sbjct: 419 DDVSPEPCQEL 429
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/397 (46%), Positives = 262/397 (65%), Gaps = 3/397 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R S+ FGG GDG+T NT AF A+ +++ + GGA LYVP G WLTG F+L SH
Sbjct: 44 RGAWMSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHM 103
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A + A+QD + WP+I PLPSYGRGR+ RY SLI G L DV +TG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTI 163
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG++WW + KG L +TRP+L+E M + N +S+L +SP WN+HPVY SN++++ +
Sbjct: 164 DGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNL 223
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI+AP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWDEYGIAYG P+ + IRR
Sbjct: 224 TILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRR 283
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+T SP+ A ++GSE SGG+++V AE + ++ GV IKT GRGG++++I V + +
Sbjct: 284 ITGSSPF-AGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVIL 342
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+++ + G+ G H D Y+ ALP++ + +++ N+ A ++GI F+ IC
Sbjct: 343 DNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRIC 402
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
++N + +A + PW C + G V P PC L
Sbjct: 403 LSNIKLHGSAPVR--PWKCQAVSGGALDVQPSPCTEL 437
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 265/408 (64%), Gaps = 4/408 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R ++TDFG VGDG T NTKAF+ AI +S+ + GG QL VPAG+WLT FNL SH
Sbjct: 71 RPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHL 130
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L QD WP++ PLPSYG GR+ RY SLI G NL DV++TG NGTI
Sbjct: 131 TLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTI 190
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
GQG WW+++ + L +TR L++ M++ +I IS++TL +SP W +HP NI V+ +
Sbjct: 191 SGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITVRNV 250
Query: 293 TIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+APV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAYG P+K + IR
Sbjct: 251 TILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIR 310
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
+ S SA I++GSEMSGG+ + E++ N+ GVRIKTA GRGGYV+DI R +T
Sbjct: 311 NVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLT 370
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ T++ + +Y H D YDPKALPV++ I++ I V + R+ G P +
Sbjct: 371 LDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNV 430
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELLPDQGPEKIR 518
+ ++G+ K K + + CA + G G + P PC+ L D+ E+ R
Sbjct: 431 TFKDMSVGITYKKKHI-FQCAFVHGRVIGTIFPAPCDNL-DRYDERQR 476
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/427 (45%), Positives = 265/427 (62%), Gaps = 8/427 (1%)
Query: 83 LIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ 142
L+ +L RG E A + F+ + R HS SI +FG VGDGKT NT AF++AI
Sbjct: 8 LLAFTILLIRG-EGNNAICKEIFKLDP---RPHSVSILEFGAVGDGKTLNTLAFQNAIFY 63
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGR 202
L ++ GGAQLYVP GKWLTGSFNL SH TL+L K A +LAS D + W V+ PLPSYGR
Sbjct: 64 LKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGR 123
Query: 203 GRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTD 262
G + RY SLI G NL DV++TG+NGT DGQGA WW+ G L Y+RP+++EF+ +
Sbjct: 124 GIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLETGSLNYSRPHIIEFVSSK 183
Query: 263 NIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIV 322
+I IS+LT LN+PS N+HPVY S I ++ + I V SP G+ PDS N IED I
Sbjct: 184 HILISNLTFLNAPSINIHPVYCSQIHIRKVLIETSVDSPYVLGVAPDSSDNVCIEDSTIN 243
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK 382
G D V++KSGWD+YGI YG PT + IR L+ SP A I+ GSEMSGGI DV E +
Sbjct: 244 VGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFGSEMSGGISDVTVERLN 303
Query: 383 AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQ 442
++ GV +T GRGGY+++I + + + ++ A G+ GSH D+ +D ALPV+
Sbjct: 304 IQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDWDALPVVT 363
Query: 443 GINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVT 502
I R+ ++ +A L GI PFT IC+ + + + W C+++ G + V+
Sbjct: 364 HIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHLHTHSD----SWICSNVSGFSDDVS 419
Query: 503 PPPCELL 509
P PC+ L
Sbjct: 420 PEPCQEL 426
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 265/408 (64%), Gaps = 4/408 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R ++TDFG VGDG T NTKAF+ AI +S+ + GG QL VPAG+WLT FNL SH
Sbjct: 71 RPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHL 130
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L QD WP++ PLPSYG GR+ RY SLI G NL DV++TG NGTI
Sbjct: 131 TLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTI 190
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
GQG WW+++ + L +TR L++ M++ +I IS++TL +SP W +HP NI ++ +
Sbjct: 191 SGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITIRNV 250
Query: 293 TIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+APV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAYG P+K + IR
Sbjct: 251 TILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIR 310
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
+ S SA I++GSEMSGG+ + E++ N+ GVRIKTA GRGGYV+DI R +T
Sbjct: 311 NVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLT 370
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ T++ + +Y H D YDPKALPV++ I++ I V + R+ G P +
Sbjct: 371 LDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNV 430
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELLPDQGPEKIR 518
+ ++G+ K K + + CA + G G + P PC+ L D+ E+ R
Sbjct: 431 TFKDMSVGITYKKKHI-FQCAFVHGRVIGTIFPAPCDNL-DRYDERQR 476
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/381 (45%), Positives = 258/381 (67%), Gaps = 3/381 (0%)
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
+T +T AF+ A+ + + + GGA LYVP G WLTG FNL SH TL+L + A + A+QD
Sbjct: 55 RTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDT 114
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL 248
+ WP+I+PL SYGRGR+ GRY SLI G L DV++TGDNGTIDGQG+ WW + KG L
Sbjct: 115 SSWPLIEPLLSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTL 174
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
+TRP+L+E M + ++ +S++ +SP WN+HPVY SN++++ +T++AP SPNTDGI+P
Sbjct: 175 PFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDP 234
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
DS +N IEDCYI +GDD +A+KSGWDEYG+AYG P+ + IRR+T SP+ A A+GSE
Sbjct: 235 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSE 293
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
SGG++ V AE + ++ G+ IKT GRGG+++++ V +T+ ++++ + G+ G H
Sbjct: 294 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 353
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
D+ YD ALPV+ G+ +++ N+ A ++GI+ F+ IC++N + A + P
Sbjct: 354 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVR--P 411
Query: 489 WTCADIGGMTSGVTPPPCELL 509
W C + G V P PC L
Sbjct: 412 WKCEAVSGAALDVQPSPCTEL 432
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/428 (44%), Positives = 270/428 (63%), Gaps = 13/428 (3%)
Query: 84 IVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQL 143
IV LL+ R A +R RL YN +TDFGGVGD T NT+AF+ AI+ +
Sbjct: 52 IVEGLLTFRRAPARPLPRLRPAVYN----------LTDFGGVGDSVTVNTEAFERAISAI 101
Query: 144 SQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRG 203
S+ GG QL VPAG WLT FNL SH TL+L +DA +L QD WP++ PLPSYG G
Sbjct: 102 SKLGKKGGGQLNVPAGNWLTAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYG 161
Query: 204 RDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDN 263
R+ RY SLI G NL DV++TG NGTI+GQG WW+++ + L +TR L++ M++ +
Sbjct: 162 REHRGARYGSLIHGQNLKDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSD 221
Query: 264 IQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV-TSPNTDGINPDSCTNTRIEDCYIV 322
I IS++TL +SP W +HP N+ ++ +TI+AP+ +PNTDGI+PDSC + IEDCYI
Sbjct: 222 IVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYIS 281
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK 382
GDD +A+KSGWD+YG+AYG P+ ++IR L S SA +++GSEMSGG+ +V E++
Sbjct: 282 VGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLL 341
Query: 383 AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQ 442
N+ VRIKT+ GRGGYV+ I R +T ++ + +Y H D+ +DPKALP+++
Sbjct: 342 VWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILE 401
Query: 443 GINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG-V 501
I++ + V + R+ G P + + ++G+ K K + + CA + G G V
Sbjct: 402 DISFTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHI-FQCAYVEGRVIGTV 460
Query: 502 TPPPCELL 509
P PCE L
Sbjct: 461 FPAPCENL 468
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/404 (48%), Positives = 274/404 (67%), Gaps = 5/404 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSS-DGGAQLYVPAGKWLTGSFNLISH 171
R + S+TDFGGVGDG T NTKAF++AI +++ S +GG LYVP G +LT FNL SH
Sbjct: 40 RTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVPPGVYLTEPFNLTSH 99
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL+L A + A+QD + WP+I PLPSYGRGR+ GRY S I G L DV++TG+NGT
Sbjct: 100 MTLHLAAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGT 159
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
IDGQG +WW + K L++TRP L+EF+ + +I IS++ +SP WN+HPVY SN++++
Sbjct: 160 IDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRF 219
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+AP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG + + IR
Sbjct: 220 ATILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIR 279
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R++ SP+ A IA+GSE SGG++++ AE I N G+ IKT +GRGGY+K+I V +
Sbjct: 280 RVSGSSPF-AGIAVGSETSGGVENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVY 338
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ + ++G+ G HAD+ YD ALP+++GI ++ V A ++G+ PFT I
Sbjct: 339 IENARKGIKISGDVGDHADDKYDSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDI 398
Query: 472 CIANATI-GMAAKHKKVP-WTCADIGGMTSGVTPPPC-ELLPDQ 512
C+++ + G+ + P W C+D+ G+ V+P PC EL+ Q
Sbjct: 399 CLSDINLHGVNGTRSRTPSWQCSDVSGVALQVSPWPCSELISHQ 442
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/415 (43%), Positives = 259/415 (62%), Gaps = 4/415 (0%)
Query: 96 SRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQY-SSDGGAQL 154
S A DS R S+ FG GDG+T NT AF A+ ++ + + GG L
Sbjct: 17 SSSAGAQDSCWSGPAPLRGAWMSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLL 76
Query: 155 YVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSL 214
YVP G WLTG FNL SH TL+L + A + A+QD + WP+I PLPSYGRGR+ GRY SL
Sbjct: 77 YVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSL 136
Query: 215 IFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNS 274
I G L DV +TG+NGTIDGQG+LWW + K L +TRP+L+E MY+ ++ +S++ +S
Sbjct: 137 IHGNGLQDVFITGENGTIDGQGSLWWDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDS 196
Query: 275 PSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 334
P WN+HPVY SN+++ +T++AP SPNTDGI+ DS +N IED YI +GDD +++KSGW
Sbjct: 197 PFWNIHPVYCSNVVIANVTVLAPHDSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKSGW 256
Query: 335 DEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKT 394
DEYGIA+G P+ + IRR+T P+ A A+GSE SGG+++V E + G+ IKT
Sbjct: 257 DEYGIAFGRPSSGITIRRITGSGPF-AGFAVGSETSGGVENVLVEHLNLFGMGVGIHIKT 315
Query: 395 AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV 454
GRGG++++I V +T++ ++ + G+ G H D Y+P LPV+ + ++++ N+
Sbjct: 316 NSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYNPSVLPVVNSVTIKNVLGQNI 375
Query: 455 SMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
A + GI F+ IC++N + +A PW C + G V P PC L
Sbjct: 376 RQAGLIRGIRNSVFSNICLSNVKLYGSASIG--PWKCRAVSGAALDVQPSPCTEL 428
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 266/424 (62%), Gaps = 3/424 (0%)
Query: 86 VALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQ 145
V L+ QR + + + A R ++TDFGGVGDG T NTKAF+ A++ +S+
Sbjct: 25 VFLVWQRNVINGFLVLGEELNWEAPKLRPVVFNLTDFGGVGDGVTLNTKAFERAVSVISK 84
Query: 146 YSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRD 205
+ + GGAQL VP G WLT FNL S TL+L +DA +LA QD WP++ LPSYG GR+
Sbjct: 85 FRNQGGAQLNVPPGFWLTSPFNLTSRMTLFLARDAVILAVQDEKYWPLMPALPSYGYGRE 144
Query: 206 AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQ 265
RY+SLI G NL DV++TG NGTI+GQG WW + L YTR L++ MY+ +I
Sbjct: 145 HPGPRYSSLIHGQNLKDVVITGHNGTINGQGQTWWTKHLHKLLNYTRGPLVQIMYSSDIV 204
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSG 324
IS++TL +SP W +HP N+ ++ +TI+APV +PNTDGI+PDSC + IEDCYI G
Sbjct: 205 ISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVG 264
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI 384
DD +A+KSGWD+YGIAY P+K ++IR L S SA I++GSEMSGG+ +V E+I
Sbjct: 265 DDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTIENILVW 324
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGI 444
+ +RIKTA GRGGYV+ I R +T H ++ + +Y H D+ YDP ALP+++ I
Sbjct: 325 ESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKTDYNEHPDDGYDPTALPILRDI 384
Query: 445 NYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG-VTP 503
++ +I + V + R+ G P + + +G+ K K + + CA + G G + P
Sbjct: 385 SFTNIRGEGVRVPVRITGSEEIPVRNVTFHDMNVGITYKKKHI-FQCAFVEGRVIGTIFP 443
Query: 504 PPCE 507
PC
Sbjct: 444 KPCR 447
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/405 (47%), Positives = 260/405 (64%), Gaps = 4/405 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA--QLYVPAGKWLTGSFNLIS 170
RA SAS+ +FG VGDG TSNT AF+ A+ L Q ++ G L VP G+WLTGSFNL S
Sbjct: 73 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTS 132
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
FTL+LH A +L SQD EWP+I PLPSYGRGR+ R+ SLI G NL DV++TG NG
Sbjct: 133 RFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNG 192
Query: 231 TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
TIDGQG +WW+ + L +TR +L+E + + N+ IS++TL NSP W VHPVY N++++
Sbjct: 193 TIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIK 252
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
+TI+AP+ +PNTDGI+PDS ++ IEDCYI SGDD VA+KSGWD+YGI+ P+ ++I
Sbjct: 253 DLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIII 312
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
+R++ +P + + +GSEMSGG+ V D+ N+ S VRIKT VGRGG+V ++ V +
Sbjct: 313 QRVSGTTPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANV 372
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
TM +K + H+D+ YD ALP I + DIV +V A LE + G + G
Sbjct: 373 TMERVKVPIRFSRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEG 432
Query: 471 ICIANAT--IGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
IC N + + + + W C + G GV P CE L G
Sbjct: 433 ICFRNVSLRLREEVRRRHAGWQCESVYGEAHGVFPEACEELRHNG 477
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/399 (45%), Positives = 262/399 (65%), Gaps = 3/399 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + ++TDFGGVGDG T NT+AF+ A++ +S++ GGAQL VP G+WLT FNL SH
Sbjct: 70 RPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHM 129
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +DA +L D WP++ PLPSYG GR+ RY SLI G +L DV++TG NGTI
Sbjct: 130 TLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTI 189
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
+GQG WW+++ + +L +TR L++ M++ +I I+++TL +SP W +HP NI ++G+
Sbjct: 190 NGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGV 249
Query: 293 TIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+APV +PNTDGI+PDSC + IEDCYI GDD +AVKSGWD+YGI YG P+ ++IR
Sbjct: 250 TILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIR 309
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
L S SA I++GSEMSGG+ +V E++ ++ GVRIKTA GRG YV+ I R +T
Sbjct: 310 NLVVRSMVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNIT 369
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ M +Y H D+ YDP ALP+++ I++ + V + R+ G P +
Sbjct: 370 FENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNV 429
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+ ++G+ K K + + CA + G G + P PCE L
Sbjct: 430 TFKDMSVGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENL 467
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 252/397 (63%), Gaps = 5/397 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS ITDFG VGDG+T NT AF++A+ L ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 37 RPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 96
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L KDA +LASQD + W V LPSYGRG D RY SLI G L DV+VTGDNGTI
Sbjct: 97 TLFLEKDAVILASQDPSHWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDNGTI 156
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WW +F+ L+Y+RP+L+EF+ + N+ +S+LT LN+P++ +H VY SN+ + +
Sbjct: 157 DGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIHRV 216
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T SP T GI PDS N I+D I G D +++KSGWDEYGI+Y PT + I+
Sbjct: 217 TANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKN 276
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + ++I+ GSEMSGGI DV D N+ SG+ +T GRGGY+K+I + + M
Sbjct: 277 VYLGAASGSSISFGSEMSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHM 336
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ AF G++G+H D+ +D A P++ I DI +N+S A G PFT I
Sbjct: 337 VNVGTAFLANGSFGTHPDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSIL 396
Query: 473 IANATIGMAAKHKKVP---WTCADIGGMTSGVTPPPC 506
++N I ++ K+ P W C+ + G + V P PC
Sbjct: 397 LSN--ISLSIKNSDSPADFWQCSYVDGSSEFVVPEPC 431
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/399 (45%), Positives = 263/399 (65%), Gaps = 4/399 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + ++TDFGGVGDG T NT+AF+ A++ +S++ GGAQL VP G+WLT FNL SH
Sbjct: 70 RPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHM 129
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +DA +L D WP++ PLPSYG GR+ RY SLI G +L DV++TG NGTI
Sbjct: 130 TLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTI 189
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
+GQG WW+++ + +L +TR L++ M++ +I I+++TL +SP W +HP NI ++G+
Sbjct: 190 NGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGV 249
Query: 293 TIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+APV +PNTDGI+PDSC + IEDCYI GDD +AVKSGWD+YGI YG P+ ++IR
Sbjct: 250 TILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIR 309
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
L +P+ A I++GSEMSGG+ +V E++ ++ GVRIKTA GRG YV+ I R +T
Sbjct: 310 NLVKSTPF-AGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNIT 368
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ M +Y H D+ YDP ALP+++ I++ + V + R+ G P +
Sbjct: 369 FENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNV 428
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+ ++G+ K K + + CA + G G + P PCE L
Sbjct: 429 TFKDMSVGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENL 466
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/399 (45%), Positives = 257/399 (64%), Gaps = 3/399 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + ++TDFG VGDG T NT+AF+ A++ +S+ + GG QL VP GKWLT FNL SH
Sbjct: 73 RPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTSHM 132
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +DA +L QD N WP++ PLPSYG GR+ RY SLI G NL D+++TG NGTI
Sbjct: 133 TLFLAEDAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNGTI 192
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG WW+++ + L +TR L++ M++ +I ++TL NSP W +HP N+ ++ +
Sbjct: 193 DGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIRNV 252
Query: 293 TIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+AP+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAYG P+ ++IR
Sbjct: 253 TILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIR 312
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
L S SA I++GSEMSGG+ V E++ ++ VRIKTA GRG YV++I R +T
Sbjct: 313 NLVVRSMVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLT 372
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ + +Y H D YDPKA+P +Q I++ I V + R+ G P +
Sbjct: 373 FDDVRVGIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVRNV 432
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+ ++G+ K K + + CA + G G + P PCE L
Sbjct: 433 TFQDMSVGLTYKKKHI-FQCAFVQGRVIGTIFPAPCENL 470
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 257/423 (60%), Gaps = 29/423 (6%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R S+ FGGVGDG+ NT AF A+ ++ + + GGA LYVPAG WLTG FNL SH
Sbjct: 44 RGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 173 TLYLHKDAFLLASQ--------------------------DLNEWPVIKPLPSYGRGRDA 206
TL+L + A + A+Q D + WP+I PLPSYGRGR+
Sbjct: 104 TLFLARGAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDPLPSYGRGREL 163
Query: 207 AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQI 266
GRY SLI G L DV +TG+NGTIDGQG++WW + K L +TRP+L+E + + ++ I
Sbjct: 164 PGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVII 223
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
S++ +SP WN+HPVY SN+++ +T++AP SPNTDGI+PDS +N IED YI +GDD
Sbjct: 224 SNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDD 283
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
+++KSGWDEYGIA+G P+ + IRR+T P+ A A+GSE SGG+++V E +
Sbjct: 284 LISIKSGWDEYGIAFGRPSSGITIRRITGSGPF-AGFAVGSETSGGVENVHVEHLNFFGM 342
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
G+ +KT GRGG++++I V +T++ ++ + G+ G H D YDP LPV+ G+
Sbjct: 343 GVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTI 402
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC 506
+++ N+ A + GI F+ IC++N + + PW C + G V P PC
Sbjct: 403 KNVWGQNIRQAGLVRGIRDSVFSRICLSN--VKLYGGDSVGPWKCRAVSGGALDVQPSPC 460
Query: 507 ELL 509
L
Sbjct: 461 AEL 463
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/401 (45%), Positives = 255/401 (63%), Gaps = 1/401 (0%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
++S R HS SITDFG VGDGKT NT AF++A+ L ++ GGAQLYVP G WLTGSF+L
Sbjct: 35 SLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGNWLTGSFSL 94
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
SH TL+L A ++ASQD + W V+ PLPSYGRG D RY SLI G L DV+VTGD
Sbjct: 95 TSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGTDLPGKRYKSLINGNMLHDVVVTGD 154
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
NGTIDGQG +WW +F LKY RP+L+EF+ + N+ +S+LT LN+P++ +H +YSS++
Sbjct: 155 NGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVY 214
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
+ I + SP T GI PDS I++ I G D +++KSGWDEYGIAY PT+ +
Sbjct: 215 IHKILAHSSPESPYTIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENV 274
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
IR + ++I+ GSEMSGGI DV ++ N+ +G+ +T GRGGY+K+I +
Sbjct: 275 HIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDIS 334
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+ M + A G++GSH D+ YD ALP++ I +I +N+ +A +L GI PF
Sbjct: 335 NIDMSRIGTAIVANGSFGSHPDDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPF 394
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ + ++N + ++ W C+ + G + V P PC L
Sbjct: 395 SAVALSNIALSTSSGSSVS-WQCSYVYGSSESVIPEPCPEL 434
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/399 (46%), Positives = 252/399 (63%), Gaps = 5/399 (1%)
Query: 111 SCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLIS 170
S R HS ITDFG VGDGKT NT AF++A+ L ++ GGAQLYVP G+WLTGSFNL S
Sbjct: 37 SERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTS 96
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
H TL+L KDA +LASQD + W V LPSYGRG D RY SLI G L DV+VTGDNG
Sbjct: 97 HLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNG 156
Query: 231 TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
TIDGQG +WW +F+ L+Y+RP+L+EF+ +N+ +S+LT LN+P++ +H VY N+ +
Sbjct: 157 TIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIH 216
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
+T SP T GI PDS N I++ I G D +++KSG DEYG++Y PT + I
Sbjct: 217 RVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQI 276
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
R + + ++I+ GSEMSGGI DV D N+ SG+ +T GRGGY+K+I + +
Sbjct: 277 RNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNI 336
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
M + AF G++G+H D+ +D A P++ I DIV +N+S A G PFT
Sbjct: 337 HMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTS 396
Query: 471 ICIANATIGMAAKHKKVP---WTCADIGGMTSGVTPPPC 506
I ++N I ++ K+ P W C+ + G + V P PC
Sbjct: 397 ILLSN--ISLSIKNSASPADSWQCSYVDGSSEFVVPEPC 433
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/399 (46%), Positives = 252/399 (63%), Gaps = 5/399 (1%)
Query: 111 SCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLIS 170
S R HS ITDFG VGDGKT NT AF++A+ L ++ GGAQLYVP G+WLTGSFNL S
Sbjct: 35 SERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTS 94
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
H TL+L KDA +LASQD + W V LPSYGRG D RY SLI G L DV+VTGDNG
Sbjct: 95 HLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNG 154
Query: 231 TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
TIDGQG +WW +F+ L+Y+RP+L+EF+ +N+ +S+LT LN+P++ +H VY N+ +
Sbjct: 155 TIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIH 214
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
+T SP T GI PDS N I++ I G D +++KSG DEYG++Y PT + I
Sbjct: 215 RVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQI 274
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
R + + ++I+ GSEMSGGI DV D N+ SG+ +T GRGGY+K+I + +
Sbjct: 275 RNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNI 334
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
M + AF G++G+H D+ +D A P++ I DIV +N+S A G PFT
Sbjct: 335 HMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTS 394
Query: 471 ICIANATIGMAAKHKKVP---WTCADIGGMTSGVTPPPC 506
I ++N I ++ K+ P W C+ + G + V P PC
Sbjct: 395 ILLSN--ISLSIKNSASPADSWQCSYVDGSSEFVVPEPC 431
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 183/416 (43%), Positives = 267/416 (64%), Gaps = 13/416 (3%)
Query: 96 SRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLY 155
SR A RL YN +TDFGGVGDG+T NT+AF+ A+ ++ ++ GGAQL
Sbjct: 66 SRPAPRLRPMAYN----------LTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLN 115
Query: 156 VPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLI 215
VP G+WLTG FNL SH TL+L + A +L D WP++ LPSYG GR+ R+ SLI
Sbjct: 116 VPPGRWLTGPFNLTSHMTLFLAEGAEILGITDEKNWPLMPALPSYGYGRERKGPRFGSLI 175
Query: 216 FGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSP 275
G NL DV++TG NG+I+GQG +WW + + LK TRP L++ M++ +I ++++TL NSP
Sbjct: 176 HGQNLKDVVITGYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSKDIVVTNITLRNSP 235
Query: 276 SWNVHPVYSSNILVQGITIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 334
W+ HP +N+ V +TI++P++ +PNTDGI+PDSC + IE+CYI GDD +A+KSGW
Sbjct: 236 FWHFHPYDCTNVTVSNVTILSPISGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGW 295
Query: 335 DEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKT 394
D+YGIAYG + ++IR +T S SA I++GSEMSGG+ ++ E++ ++ GVRIKT
Sbjct: 296 DQYGIAYGRSSSNILIRNVTVRSLVSAGISIGSEMSGGVANITVENVHIWDSRRGVRIKT 355
Query: 395 AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV 454
A+GRGGY+++I +T ++ + +Y HAD+ YD A P I GI+++ I V
Sbjct: 356 AIGRGGYIRNISYSNITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKKIHGRGV 415
Query: 455 SMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+ R G + P I + ++G++ K K + + C+ I G G V P PCE L
Sbjct: 416 RVPVRAHGSNYIPIKDITFQDMSVGISYKKKHI-FQCSYIEGRVIGSVFPKPCENL 470
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 261/412 (63%), Gaps = 4/412 (0%)
Query: 86 VALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQ 145
+ALL S + + A+ RA + SIT+F GVG+ +T NTK F++A S
Sbjct: 36 LALLVCFSCVSGEGETVSCSNIVALGHRADNISITEFVGVGNERTLNTKTFREA---FST 92
Query: 146 YSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRD 205
DGG LYVP G +LT +F+L SH TLYL ++A+QD + WP+I PLPSYGRGR+
Sbjct: 93 CHXDGGTLLYVPPGVYLTETFHLTSHRTLYLATGTIIMATQDSSNWPLIAPLPSYGRGRE 152
Query: 206 AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQ 265
AGRY S I G + DV++TG+NGTIDGQG WW ++ + L++TRP L+EF+ + +I
Sbjct: 153 RPAGRYMSFIHGDGVXDVVITGENGTIDGQGDEWWNKWKQRTLQFTRPNLVEFVNSRDII 212
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
IS++ +SP WN+HP SN++V+ +TI+AP SPNTDGI+P S +N IED YI +GD
Sbjct: 213 ISNVIFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTGD 272
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
D VA KSGWDEYGI YG P+ + IRR+T SP+ A IA+GSE SGG+++V +E I N
Sbjct: 273 DLVAEKSGWDEYGIVYGRPSSDITIRRVTGSSPF-AGIAIGSETSGGVENVLSEHINLYN 331
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGIN 445
G+ IKT GR GY+K+I + + M + ++G+ G H D+ YDP ALP+++G+
Sbjct: 332 MGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPDDKYDPNALPLVKGVT 391
Query: 446 YRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGM 497
+++ V A ++G+S PF IC + + + PW C D+ G
Sbjct: 392 IKNVWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPWKCTDVSGF 443
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 5/351 (1%)
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
H+ + +A L Q+ +WPV+ PLPSYGRGR+ GR+ SLI+G NLTDVI+TG+NG
Sbjct: 227 HYDIVCETNAVLCLLQNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNG 286
Query: 231 TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
TIDGQG++WW +F L +TRP+L+E + + + IS+ T LNSP W +HPVY SN+ VQ
Sbjct: 287 TIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQ 346
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
+TII P SPNTDGI+PDS N IEDCYI +GDD +++KSGWDEYGI++G P+ + I
Sbjct: 347 NVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISI 406
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
RLT + SA IA+GSEMSGG+ +V AEDI +++S +RIKT+ GRGGYV+++Y+ M
Sbjct: 407 HRLTGRTT-SAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNM 465
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
T+ + A TG YG H D+ YD ALPVI+ I +++ +N+ A ++GI GD F
Sbjct: 466 TLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVD 525
Query: 471 ICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQ-GPEKIRAC 520
IC++N T+ ++ K PW C+D+ G + V+P CE L ++ P+ + C
Sbjct: 526 ICLSNITLNVS---KNNPWNCSDVKGYSELVSPESCEQLNERIFPDHVSNC 573
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 76 VTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKA 135
+ KL + +V+AL+ + + N R HS SIT+FG VGDG T NTKA
Sbjct: 43 IEKLPDVFLVLALICCSSWTVWSSSSCK--QINIKEVRPHSVSITEFGAVGDGITLNTKA 100
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLAS 185
F++AI L+ Y+ GGA+L+VPAG+WLTGSF+LISH TL+L KDA +L S
Sbjct: 101 FQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAVILGS 150
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/391 (45%), Positives = 254/391 (64%), Gaps = 3/391 (0%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T+FGGVGDG T NT+AF+ + +S+ GG QL VP G+WLT FNL SH TL+L +
Sbjct: 73 LTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLAR 132
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
DA +LA QD WP++ LPSYG GR+ RY+SLI G NL DV++TG NGTI+GQG
Sbjct: 133 DAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGTINGQGQT 192
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW ++ + L +TR L++ +++ NI IS++TL +SP W +HP N+ V+ +TI+APV
Sbjct: 193 WWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKVTILAPV 252
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGI YG P+K +VIR L S
Sbjct: 253 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 312
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA I++GSEMSGG+ +V E+I + +RIKTA GRGGYV+ I + + + ++
Sbjct: 313 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRV 372
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H YDP+ALP+++ I++ +I V + R++G P + +
Sbjct: 373 GIVIKTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRNVTFQDMK 432
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCE 507
+G+ K K + + CA + G G + P PC+
Sbjct: 433 VGITYKKKHI-FQCAFVQGQAIGTIFPSPCD 462
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 270/444 (60%), Gaps = 29/444 (6%)
Query: 84 IVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQL 143
IV LL+ R A +R RL YN +TDFGGVGD T NT+AF+ AI+ +
Sbjct: 52 IVEGLLTFRRAPARPLPRLRPAVYN----------LTDFGGVGDXVTVNTEAFERAISAI 101
Query: 144 SQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRG 203
S+ GG QL VPAG WLT FNL SH TL+L +DA +L QD WP++ PLPSYG G
Sbjct: 102 SKLGKKGGGQLNVPAGNWLTAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYG 161
Query: 204 RDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDN 263
R+ RY SLI G NL DV+VTG NGTI+GQG WW+++ + L +TR L++ M++ +
Sbjct: 162 REHRGARYGSLIHGQNLKDVVVTGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSD 221
Query: 264 IQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV-TSPNTDGIN--------------- 307
I IS++TL +SP W +HP N+ ++ +TI+AP+ +PNTDGI+
Sbjct: 222 IVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCI 281
Query: 308 -PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALG 366
P+SC + IEDCYI GDD +A+KSGWD+YG+AYG P+ ++IR L S SA +++G
Sbjct: 282 CPNSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIG 341
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYG 426
SEMSGG+ +V E++ N+ VRIKT+ GRGGYV+ I R +T ++ + +Y
Sbjct: 342 SEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYN 401
Query: 427 SHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKK 486
H D+ +DPKALP+++ I++ + V + R+ G P + + ++G+ K K
Sbjct: 402 EHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKH 461
Query: 487 VPWTCADIGGMTSG-VTPPPCELL 509
+ + CA + G G V P PCE L
Sbjct: 462 I-FQCAYVEGRVIGTVFPAPCENL 484
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/391 (45%), Positives = 253/391 (64%), Gaps = 3/391 (0%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T+FGGVGDG T NT+AF+ + +S+ GG QL VP G+WLT FNL SH TL+L +
Sbjct: 78 LTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLAR 137
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
D+ +LA QD WP++ LPSYG GR+ RY+SLI G NL DV++TG NGTI+GQG
Sbjct: 138 DSVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGTINGQGQT 197
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW ++ + L +TR L++ +++ NI IS++TL +SP W +HP N+ V+ +TI+APV
Sbjct: 198 WWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPV 257
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGI YG P+K +VIR L S
Sbjct: 258 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 317
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA I++GSEMSGG+ +V E+I + +RIKTA GRGGYV+ I + + ++
Sbjct: 318 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRV 377
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H YDP+ALP+++ I++ +I V + R++G P + +
Sbjct: 378 GIVIKTDYNEHPGTGYDPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRNVTFQDMK 437
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCE 507
IG+ K K + + CA + G G + P PC+
Sbjct: 438 IGITYKKKHI-FQCAFVQGQAIGTIFPSPCD 467
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/399 (44%), Positives = 256/399 (64%), Gaps = 3/399 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + ++TDFG VGDG T NT+AF+ A++ +S+ S GG QL VP G+WLT FNL SH
Sbjct: 73 RPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHM 132
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A +L QD WP++ LPSYG GR+ RY SLI G NL DV++TG NGTI
Sbjct: 133 TLFLAEGAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTI 192
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG WW+++ + L +TR L++ M++ +I +++TL +SP W +HP N+ ++ +
Sbjct: 193 DGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRNV 252
Query: 293 TIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+AP+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAYG P+ ++IR
Sbjct: 253 TILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIR 312
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
L S SA I++GSEMSGG+ +V E++ ++ VRIKTA GRGGYV+ I R +T
Sbjct: 313 NLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLT 372
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ + +Y H D YDPKA+P++ I++ I V + R+ G P +
Sbjct: 373 FDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRNV 432
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+ ++G+ K K + + CA + G G V P PCE L
Sbjct: 433 TFWDMSVGLTYKKKHI-FQCAFVQGRVIGTVFPAPCENL 470
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/392 (44%), Positives = 260/392 (66%), Gaps = 4/392 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSD-GGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+ DFGGVGDG T NT+AF+ A+ +S+ + GG QL VP G+WLT FNL SH TL+L
Sbjct: 89 LKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+D+ +L +D WP++ PLPSYG GR+ RY SLI G NL D+++TG NGTI+GQG
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+++ + L YTR L++ M++ +I I+++T+ +SP W +HP N+ ++ +TI+AP
Sbjct: 209 SWWKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 298 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
VT +PNTDGI+PDSC + IEDCYI +GDD +A+KSGWD++GIAYG P+ ++IR L
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA +++GSEMSGGI +V E++ N+ G+RIKTA GRGGY+++I + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y HAD++YD KA P++ G ++ I V + R+ G P + +
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCE 507
++G+ K K + + C+ + G G + P PCE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/399 (44%), Positives = 258/399 (64%), Gaps = 3/399 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + ++TDFGGVGDG T NT+AF+ A+ +S+ GG QL VP G+W+T FNL SH
Sbjct: 72 RPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNLTSHM 131
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +D+ +L +D WP++ PLPSYG GR+ RY SLI G NL DV++TG NGTI
Sbjct: 132 TLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDVVITGHNGTI 191
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
+GQG WW+++ + L +TR L++ M++ +I I+++TL +SP W +HP N+ ++ +
Sbjct: 192 NGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHPYDCKNVTIRNV 251
Query: 293 TIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+APV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAY P+ ++IR
Sbjct: 252 TILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIR 311
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
L S SA I++GSEMSGG+ ++ E++ ++ VRIKTA GRGGYV+ I R +T
Sbjct: 312 NLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLT 371
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
++ + +Y H D YDPKA+PV++ I++ + V + R+ G P +
Sbjct: 372 FDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEEIPVRNV 431
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+ ++G+ K K + + CA + G G + P PCE L
Sbjct: 432 TFQDMSVGLTYKKKHI-FQCAFVQGRVIGTIFPAPCENL 469
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 262/419 (62%), Gaps = 8/419 (1%)
Query: 103 DSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL 162
D ++S R HS SITDFG VGDGKT NT AF++A+ L ++ GGAQLYVP G WL
Sbjct: 29 DELGRRSLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWL 88
Query: 163 TGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTD 222
TGSF+L SH TL+L A ++ASQD + W V+ PLPSYGRG D RY SLI G L D
Sbjct: 89 TGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGIDLPGKRYKSLINGNKLHD 148
Query: 223 VIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
V+VTGDNGTIDGQG +WW +F LKY RP+L+EF+ ++N+ +S+LT LN+P+++++ +
Sbjct: 149 VVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSI 208
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
YSS++ + I + SP T GI PDS I++ I G D +++KSGWDEYGIAY
Sbjct: 209 YSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYS 268
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
PT+ + IR + ++I+ GSEMSGGI DV ++ + +G+ +T GRGGY+
Sbjct: 269 RPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYI 328
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEG 462
K+I + + M + A G++GSH D+ YD ALP++ I +I +N+ +A +L G
Sbjct: 329 KEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFG 388
Query: 463 ISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACD 521
I PF+ + ++N ++ M++ W C+ + G + V P PC PE R D
Sbjct: 389 IKESPFSSVTLSNVSLSMSSGSSVS-WQCSYVYGSSESVIPEPC-------PELKRDAD 439
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/399 (47%), Positives = 257/399 (64%), Gaps = 6/399 (1%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQL-SQYSSDGGAQLYVPAGKWLTGSFNLISH 171
R SI DFG VGDGKT NT AF AI+++ + +S G L+VP G +LT SFNL SH
Sbjct: 41 RTEMLSIFDFGAVGDGKTLNTNAFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNLTSH 100
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TLYL A + A QD +W + PLPSYGRGR+ RY S I G L DV++TG NGT
Sbjct: 101 MTLYLADGAVIKAVQDTGKWRLTDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRNGT 160
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
IDGQG WW + G L++TRP L+EF + NI +S + L NS W +HPVY SN++V
Sbjct: 161 IDGQGEPWWNMWRHGTLEFTRPGLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVVHH 220
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+TI+AP S NTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAY +P++ + IR
Sbjct: 221 VTILAPTDSFNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIR 280
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R+T SP+ A IA+GSE SGGIQ+V E+I N+ G+ IKT +GRGG ++ I + G+
Sbjct: 281 RITGSSPF-AGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVY 339
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ ++ ++G+ G H D+ ++ ALP+++GI +++ V A ++G+ PFT +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 472 CIANATIGMAAKHKKVP-WTCADIGGMTSGVTPPPCELL 509
C +N T+ K P W C+D+ G S V P PC L
Sbjct: 400 CFSNVTL---TGTKSTPIWKCSDVVGAASKVNPTPCPEL 435
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/425 (44%), Positives = 267/425 (62%), Gaps = 13/425 (3%)
Query: 87 ALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQY 146
A L R A R RL YN +TDFGGVGDG+T NT+AF+ A+ ++
Sbjct: 58 AGLGLRSASWRPPPRLRPGAYN----------LTDFGGVGDGRTLNTQAFERAVEAIAAL 107
Query: 147 SSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDA 206
+ GG QL VP G+WLT FNL SH TL+L + A +L D W ++ LPSYG GR+
Sbjct: 108 ADRGGGQLNVPPGRWLTAPFNLTSHMTLFLAEGAEILGITDEKYWTLMPALPSYGYGRER 167
Query: 207 AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQI 266
RY SLI G NL DV++TG NG+I+GQG +WW + + LK TRP L++ M++ +I +
Sbjct: 168 KGPRYGSLIHGQNLKDVVITGYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSSDIIV 227
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGD 325
+++TL NSP W+ HP +N+ V +TI+APV+ +PNTDGI+PDSC + IE+CYI GD
Sbjct: 228 TNITLRNSPFWHFHPYDCTNVTVSNVTILAPVSGAPNTDGIDPDSCQDVLIENCYISVGD 287
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
D +AVKSGWD+YGIAYG P+ ++IR + S SA I++GSEMSGG+ +V E+++ +
Sbjct: 288 DAIAVKSGWDQYGIAYGRPSSNILIRNVAVRSLVSAGISIGSEMSGGVANVTVENVRIWD 347
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGIN 445
+ GVRIKTA GRGGY+++I R +T ++ + +Y HAD+ YD A P I GI+
Sbjct: 348 SRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGIS 407
Query: 446 YRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG-VTPP 504
+++I V + R G + P + + ++G++ K K + + C+ I G G V P
Sbjct: 408 FKEIHGWGVRVPVRAHGSNIIPIKDVTFQDMSVGISYKKKHI-FQCSYIEGRVIGSVFPK 466
Query: 505 PCELL 509
PCE L
Sbjct: 467 PCENL 471
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/429 (43%), Positives = 266/429 (62%), Gaps = 22/429 (5%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +TDFGGVGDG+ NT+AF+ A+ ++ + GG QL VP G+WLT FNL SH
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 173 TLYLHKDA--------------FLLASQDLNE--WPVIKPLPSYGRGRDAAAGRYTSLIF 216
TL+L + + LL+ D +E WP++ LPSYG GR+ R+ SLI
Sbjct: 140 TLFLAEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIH 199
Query: 217 GTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPS 276
G NL DV++TG NG+I+GQG +WW + + L TRP L++ M++ +I ++++TL NSP
Sbjct: 200 GQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPF 259
Query: 277 WNVHPVYSSNILVQGITIIAPVTS-PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 335
W+ HP +NI V +TI+AP++S PNTDGI+PDSC + IE+CYI GDD +AVKSGWD
Sbjct: 260 WHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWD 319
Query: 336 EYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTA 395
+YGIAYG P++ +VIR + S SA I++GSEMSGGI +V ED++ + G+RIKTA
Sbjct: 320 QYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTA 379
Query: 396 VGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVS 455
+GRGGY+ DI R +T ++ + +Y HAD+ YD A P I I++++I V
Sbjct: 380 IGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVR 439
Query: 456 MAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCE---LLPD 511
+ R G S P I + +IG++ K K + + C+ I G G V P PCE L +
Sbjct: 440 VPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-FQCSFIEGRVIGSVFPKPCENLDLYNE 498
Query: 512 QGPEKIRAC 520
QG RA
Sbjct: 499 QGQLVKRAA 507
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/394 (44%), Positives = 259/394 (65%), Gaps = 3/394 (0%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++TDFG VGDG T NT+AF+ AI ++S+ ++ GG QL VP G+WLT FNL S+ TL+L
Sbjct: 70 NLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYMTLFLA 129
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
++A +LA QD WP++ PLPSYG GR+ RY S I G NL DV+VTG+NG+I+GQG
Sbjct: 130 ENAEILALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQ 189
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+++ + L +TR L++ M++ +I +++TL +SP W +HP N+ + +TI+AP
Sbjct: 190 TWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAP 249
Query: 298 V-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
V +PNTDGI+PDSC + IE+ YI GDD +A+KSGWD+YG YG P+K ++IR L
Sbjct: 250 VFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIR 309
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA I++GSEMSGG+ ++ E+I ++ GVRIKTA GRGGYV+DI R +T+ ++
Sbjct: 310 SMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELR 369
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y H D ++P+A P+++ INY I V + R++G P + +
Sbjct: 370 VGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM 429
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
++G+ K K + + CA + G G + P PCE L
Sbjct: 430 SVGITYKKKHI-FQCAYVEGRVIGTIFPAPCENL 462
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 177/396 (44%), Positives = 252/396 (63%), Gaps = 3/396 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + ++TDFGGVGDG T NT AF+ A++ +S+ GG QL VP G WLT FNL SH
Sbjct: 60 RPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHM 119
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L +DA +L QD WP++ LPSYG GR+ RY SLI G NL DV++TG NGTI
Sbjct: 120 TLFLAQDAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTI 179
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
+GQG WW ++ + L +TR L++ M++ +I I+++TL +SP W +HP N+ ++ +
Sbjct: 180 NGQGQSWWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIKNV 239
Query: 293 TIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
TI+APV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAYG P+K ++IR
Sbjct: 240 TILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIR 299
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
L S SA I++GSEMSGG+ +V E++ + +RIKTA GRGGY++ I R +T
Sbjct: 300 NLVVRSNVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLT 359
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ ++ + NY H D YDP A PV+ I++ ++ V + R+EG +
Sbjct: 360 FNNVRVGIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPVRIEGSKEISVRNV 419
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPC 506
+ +G+ K K + + CA + G G + P PC
Sbjct: 420 TFQDMNVGITYKKKHI-FQCAFVEGRVIGTIFPAPC 454
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/206 (83%), Positives = 195/206 (94%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
Y+A++CRAHS S+ DFGGVGDGKTSNTKAFK AI+ LSQ +S+GG+QLYVPAGKWLTGSF
Sbjct: 1 YSALNCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSF 60
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+LISHFTLYLHKDA LLASQD+NEWPVIKPLPSYGRGRDAAAGR+TSLIFGTNLTDVIVT
Sbjct: 61 SLISHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVT 120
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
GDNGTIDGQG+ WWQQFH KLKYTRPYL+E M++DNIQIS+LTLL+SPSWN+HPVYSSN
Sbjct: 121 GDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSN 180
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCT 312
I+++GITIIAP+ SPNTDGINPDSCT
Sbjct: 181 IIIKGITIIAPIRSPNTDGINPDSCT 206
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 161/233 (69%), Positives = 201/233 (86%), Gaps = 1/233 (0%)
Query: 110 ISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI 169
I+CR HSA +T+FGG+GDGKTSNTKAFK AI+ L Q+++DGGA+L VP GKWLTGSFNL
Sbjct: 42 INCRKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLT 101
Query: 170 SHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
SHFTLY+HKDA +L SQ+ +++P I PLPSYG+GRD GR++SLIFGTNLTDV++ G N
Sbjct: 102 SHFTLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDGG-GRFSSLIFGTNLTDVVIIGGN 160
Query: 230 GTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
GTI+GQG +WW +F + KL TRPYL+E M++D +QIS+LTL++SPSWNVHPVY S++++
Sbjct: 161 GTINGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVII 220
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
QG+TI+APV PNTDGINPDSC N +IEDCYIVSGDDC+AVKSGWD+YGI YG
Sbjct: 221 QGMTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYG 273
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/260 (65%), Positives = 200/260 (76%), Gaps = 5/260 (1%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
S EY AI+CR HSA +TDFG GDGKT NTKAFK AI LSQ + DGGAQL VP GKWLT
Sbjct: 288 SEEYRAINCRKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLT 347
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
GSFNL SHFTL++HKDA +L +QD +P+I+ LPSYG GRD GR+ SLIFGTNLTDV
Sbjct: 348 GSFNLTSHFTLFVHKDAVILGAQDEAAYPLIEILPSYGAGRDGG-GRHASLIFGTNLTDV 406
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
++TG NGTI GQG WW +F KLK TRPYL+E MY+D +QIS+L L++SPSWNVHP Y
Sbjct: 407 VITGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTY 466
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
SSN+++Q +TIIAPV SPNTDGINPDS N IEDC+IVSGDDC+AVKSGWD+YGI G
Sbjct: 467 SSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGK 526
Query: 344 PTKQLVIRRLTCISPYSATI 363
+V +T YSA +
Sbjct: 527 GRIYMVAENVT----YSARL 542
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 449 IVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCEL 508
+VA+NV+ +ARL+GISGDPFTGICI+N IG+ K KK+ W C ++ G++S VTPP C+L
Sbjct: 531 MVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDL 590
Query: 509 LPDQGPEKIRACDFPTESLPID 530
L +K+ C FP + LPI+
Sbjct: 591 L--HPSKKVFNCPFPEDKLPIE 610
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 257/392 (65%), Gaps = 4/392 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA-QLYVPAGKWLTGSFNLISHFTLYLH 177
+ DFGGVGDG T NT+AF+ A+ +S+ G QL VP G+WLT FNL SH TL+L
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+D+ +L +D WP++ PLPSYG GR+ RY SLI G NL D+++TG NGTI+GQG
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW++ + L YTR L++ M++ +I I+++T+ +SP W +HP N+ ++ +TI+AP
Sbjct: 209 SWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 298 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
VT +PNTDGI+PDSC + IEDCYI +GDD +A+KSGWD++GIAYG P+ ++IR L
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA +++GSEMSGGI +V E++ N+ G+RIKTA GRGGY+++I + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y HAD++YD KA P++ G ++ I V + R+ G P + +
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCE 507
++G+ K K + + C+ + G G + P PCE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 257/394 (65%), Gaps = 3/394 (0%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++TDFG VGDG T NT+AF+ AI ++S+ + GG QL VP G+WLT FNL S+ TL+L
Sbjct: 67 NLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLS 126
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
++A +LA QD W ++ PLPSYG GR+ RY S I G NL DV+VTG+NG+I+GQG
Sbjct: 127 ENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQ 186
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+++ + L +TR L++ M++ +I +++TL +SP W +HP N+ + +TI+AP
Sbjct: 187 TWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAP 246
Query: 298 V-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
V +PNTDGI+PDSC + IE+ YI GDD +A+KSGWD+YG YG P+K ++IR L
Sbjct: 247 VFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIR 306
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA I++GSEMSGG+ ++ E+I ++ GVRIKTA GRGGYV+DI R +T+ ++
Sbjct: 307 SMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELR 366
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y H D ++P+A P+++ INY I V + R++G P + +
Sbjct: 367 VGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM 426
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
++G+ K K + + CA + G G + P PC+ L
Sbjct: 427 SVGITYKKKHI-FQCAYVEGRVIGTIFPAPCDNL 459
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 249/398 (62%), Gaps = 2/398 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQL-YVPAGKWLTGSFNLISH 171
R S+ FG GDG+T NT AF A+ ++++ G L YVP G WLTG FNL SH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL+L + A + A+QD + WP+I PLP YGRGR+ GRY SLI G L DV +TG+NGT
Sbjct: 100 MTLFLARGAIVRATQDTSSWPLIDPLPXYGRGRELPGGRYMSLIHGHGLQDVFITGENGT 159
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
IDGQG +WW + K L +TRP+L+E MY+ ++ +S+L +SP WN+HPVY SN+++
Sbjct: 160 IDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIAN 219
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+T++AP SPNTDGI+ DS +N +EDCYI +GDD +++KSGWDEYG+A+G P+ + +R
Sbjct: 220 LTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVR 279
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R+T P+ A A+GSE SGG++DV AE + GV +KT GRGG+++++ V +T
Sbjct: 280 RITGSGPF-AGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVT 338
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ ++ + G+ G H Y+ LPV+ G+ R++ NV A + GI F+ I
Sbjct: 339 LDGARYGLRIAGDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNI 398
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
C++N + PW C + G V P PC L
Sbjct: 399 CLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAEL 436
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 256/394 (64%), Gaps = 3/394 (0%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++TDFG VGDG T NT+AF+ AI ++S+ + GG QL VP G+WLT FNL S+ TL+L
Sbjct: 67 NLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLS 126
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
++A +LA QD W ++ PLPSYG GR+ RY S I G NL DV+VTG+NG+I+GQG
Sbjct: 127 ENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQ 186
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+++ + L +TR L + M++ +I +++TL +SP W +HP N+ + +TI+AP
Sbjct: 187 TWWKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAP 246
Query: 298 V-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
V +PNTDGI+PDSC + IE+ YI GDD +A+KSGWD+YG YG P+K ++IR L
Sbjct: 247 VFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIR 306
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA I++GSEMSGG+ ++ E+I ++ GVRIKTA GRGGYV+DI R +T+ ++
Sbjct: 307 SMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELR 366
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y H D ++P+A P+++ INY I V + R++G P + +
Sbjct: 367 VGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM 426
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
++G+ K K + + CA + G G + P PC+ L
Sbjct: 427 SVGITYKKKHI-FQCAYVEGRVIGTIFPAPCDNL 459
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 179/419 (42%), Positives = 263/419 (62%), Gaps = 6/419 (1%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+ITDFG VGDG+ NT AF+ A+ ++ + GG QL VP G+WLT FNL SH TL+L
Sbjct: 78 NITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +L D WP++ LPSYG GR+ R+ SLI G NL DV++TG NG+I+GQG
Sbjct: 138 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQGE 197
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW + + L TRP L++ M++ +I ++++TL NSP W++HP +N+ V +TI++P
Sbjct: 198 VWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIMSP 257
Query: 298 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
V+ +PNTDGI+PDSC + IE+CYI GDD +A+KSGWD+YGIAYG P+ ++IR +T
Sbjct: 258 VSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTAR 317
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA I++GSEMSGG+ +V E+++ + GVRIKTA GRGGY+++I R +T ++
Sbjct: 318 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 377
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y HAD+ YD A P I I+++ I V + R G P I +
Sbjct: 378 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDM 437
Query: 477 TIGMAAKHKKVPWTCADIGG-MTSGVTPPPCELL---PDQGPEKIRACDFPTESLPIDM 531
++G++ K K + + C+ + G + V P PCE L +QG RA + L D+
Sbjct: 438 SVGISYKKKHI-FQCSYLEGRVIRPVFPKPCENLDVYDEQGQLVKRAVALNSTELDYDI 495
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 256/392 (65%), Gaps = 4/392 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA-QLYVPAGKWLTGSFNLISHFTLYLH 177
+ DFGGVGDG T NT+AF+ A+ +S+ G QL VP G+WLT F L SH TL+L
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFYLTSHMTLFLA 148
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+D+ +L +D WP++ PLPSYG GR+ RY SLI G NL D+++TG NGTI+GQG
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW++ + L YTR L++ M++ +I I+++T+ +SP W +HP N+ ++ +TI+AP
Sbjct: 209 SWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 298 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
VT +PNTDGI+PDSC + IEDCYI +GDD +A+KSGWD++GIAYG P+ ++IR L
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA +++GSEMSGGI +V E++ N+ G+RIKTA GRGGY+++I + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y HAD++YD KA P++ G ++ I V + R+ G P + +
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 477 TIGMAAKHKKVPWTCADIGGMTSG-VTPPPCE 507
++G+ K K + + C+ + G G + P PCE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 250/410 (60%), Gaps = 14/410 (3%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQL-YVPAGKWLTGSFNLISH 171
R S+ FG GDG+T NT AF A+ ++++ G L YVP G WLTG FNL SH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 172 FTLYLHKDAF------------LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTN 219
TL+L + A L++ QD + WP+I PLPSYGRGR+ GRY SLI G
Sbjct: 100 MTLFLARGAIVRATQPCLATIELISEQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHG 159
Query: 220 LTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
L DV +TG+NGTIDGQG +WW + K L +TRP+L+E MY+ ++ +S+L +SP WN+
Sbjct: 160 LQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNI 219
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
HPVY SN+++ +T++AP SPNTDGI+ DS +N +EDCYI +GDD +++KSGWDEYG+
Sbjct: 220 HPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGV 279
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
A+G P+ + +RR+T P+ A A+GSE SGG++DV AE + GV +KT GRG
Sbjct: 280 AFGRPSSGITVRRITGSGPF-AGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRG 338
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAAR 459
G+++++ V +T+ ++ + G+ G H Y+ LPVI G+ R++ NV A
Sbjct: 339 GFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVIDGVAVRNVWGRNVRQAGL 398
Query: 460 LEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
+ GI F+ IC++N + PW C + G V P PC L
Sbjct: 399 IRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAEL 448
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 261/419 (62%), Gaps = 6/419 (1%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++TDFG VGDG+ NT+AF+ A+ ++ + GG QL VP G+WLT FNL SH TL+L
Sbjct: 83 NLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 142
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +L D WP++ LPSYG GR+ R+ SLI G NL DV++TG NG+I+GQG
Sbjct: 143 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGE 202
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW + + L TRP L++ M++ +I I+++TL NSP W++HP +N+ V +TI++P
Sbjct: 203 VWWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTILSP 262
Query: 298 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
V+ +PNTDGI+PDS + IE+CYI GDD +A+KSGWD+YGIAYG P+ + IR +
Sbjct: 263 VSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNAR 322
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S SA I++GSEMSGG+ +V E+++ + GVRIKTA GRGGY+++I R +T ++
Sbjct: 323 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 382
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +Y HAD+ YD A P I I+++ I V + R G P I +
Sbjct: 383 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQDM 442
Query: 477 TIGMAAKHKKVPWTCADIGG-MTSGVTPPPCELL---PDQGPEKIRACDFPTESLPIDM 531
++G++ K K + + C+ + G + V P PCE L +QG RA + L D+
Sbjct: 443 SVGISYKKKHI-FQCSYVEGRVVRPVFPKPCENLDIYDEQGQLVKRAVALNSTELDYDI 500
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 257/419 (61%), Gaps = 31/419 (7%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA-QLYVPAGKWLTGSFNLISHFTLYLH 177
+ DFGGVGDG T NT+AF+ A+ +S+ G QL VP G+WLT FNL SH TL+L
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 178 KDAFLLA---------------------------SQDLNEWPVIKPLPSYGRGRDAAAGR 210
+D+ +L QD WP++ PLPSYG GR+ R
Sbjct: 149 EDSEILGVEEHNLGDFETLRDGCVRLVYLTCHFNCQDEKYWPLMPPLPSYGYGRERPGPR 208
Query: 211 YTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLT 270
Y SLI G NL D+++TG NGTI+GQG WW++ + L YTR L++ M++ +I I+++T
Sbjct: 209 YGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANIT 268
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
+ +SP W +HP N+ ++ +TI+APVT +PNTDGI+PDSC + IEDCYI +GDD +A
Sbjct: 269 MRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIA 328
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+KSGWD++GIAYG P+ ++IR L S SA +++GSEMSGGI +V E++ N+ G
Sbjct: 329 IKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRG 388
Query: 390 VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI 449
+RIKTA GRGGY+++I + +T+ ++ + +Y HAD++YD KA P++ G ++ I
Sbjct: 389 IRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGI 448
Query: 450 VADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCE 507
V + R+ G P + + ++G+ K K + + C+ + G G + P PCE
Sbjct: 449 HGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 506
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 249/393 (63%), Gaps = 6/393 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FGGVGDG+T NT+AF A+ +++ GG +L VPAG+WLT FNL S TL+L
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASIAE---RGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 169
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L QD WP++ PLPSYG GR+ RY SLI G +L DV +TG NGTI+GQG
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F K L +TR L++ M + NI IS++TL +SP W +H ++ + TI+AP+
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+PDSC N I++CYI GDD +A+KSGWD+YGIAYG P+ ++I +T S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA +++GSEMSGG+ +V E++ ++ GVRIKTA GRG YV +I R +T+ ++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H D +DPKA+P+I+ I+Y I V + R++G + P + + +
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+G+ + V + C+ + G G V P PC+ L
Sbjct: 470 VGLVDRKNHV-FQCSFVQGQVIGYVFPVPCKNL 501
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 249/393 (63%), Gaps = 6/393 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FGGVGDG+T NT+AF A+ +++ GG +L VPAG+WLT FNL S TL+L
Sbjct: 13 LREFGGVGDGRTLNTEAFVAAVASIAE---RGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 69
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L QD WP++ PLPSYG GR+ RY SLI G +L DV +TG NGTI+GQG
Sbjct: 70 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 129
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F K L +TR L++ M + NI IS++TL +SP W +H ++ + TI+AP+
Sbjct: 130 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 189
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+PDSC N I++CYI GDD +A+KSGWD+YGIAYG P+ ++I +T S
Sbjct: 190 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 249
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA +++GSEMSGG+ +V E++ ++ GVRIKTA GRG YV +I R +T+ ++
Sbjct: 250 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 309
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H D +DPKA+P+I+ I+Y I V + R++G + P + + +
Sbjct: 310 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 369
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+G+ + V + C+ + G G V P PC+ L
Sbjct: 370 VGLVDRKNHV-FQCSFVQGQVIGYVFPVPCKNL 401
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/393 (45%), Positives = 249/393 (63%), Gaps = 6/393 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FGGVGDG+T NT AF+ A+ +S+ GG +L VPAG+WLT FNL SH TL+L
Sbjct: 117 LREFGGVGDGRTLNTAAFEAAVAAISE---RGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 173
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L QD WP++ PLPSYG GR+ RY SLI G +L DVI+TG NGTI+GQG
Sbjct: 174 GAEILGVQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVIITGHNGTINGQGQS 233
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F K L +TR L++ M + NI IS++TL +SP W +H N+ + G TI+AP+
Sbjct: 234 WWIKFRKKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHVYDCKNVTISGTTILAPI 293
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+PDSC N IE+CYI GDD VA+KSGWD+YGIAYG P+ + IR + S
Sbjct: 294 VGAPNTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRS 353
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA +++GSEMSGG+ +V E++ ++ GVRIKTA GRG YV +I R +T+ ++
Sbjct: 354 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 413
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H D +DPKA+PV I+Y I V + R++G + P + + +
Sbjct: 414 GIVIKTDYNEHPDELFDPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVTFHDMS 473
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+G+ K V + C+ + G G V P PC+ L
Sbjct: 474 VGILDKKHHV-FQCSFVQGQVIGYVFPVPCKNL 505
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 246/393 (62%), Gaps = 6/393 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FG VGDG+T NT AF+ AI +++ GG +L VPAG+WLT FNL SH L+L
Sbjct: 105 LREFGAVGDGRTVNTAAFESAIAAIAE---RGGGRLTVPAGRWLTAPFNLTSHMILFLAA 161
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L QD WP++ PLPSYG GR+ RY SLI G +L DV +TG NGTI+GQG
Sbjct: 162 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTINGQGQS 221
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F + L +TR L++ M + +I IS++TL +SP W +H N+ + TI+AP+
Sbjct: 222 WWVKFRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 281
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+PDSC N I++CYI GDD +A+KSGWD+YGIAYG P+ +VI+ + S
Sbjct: 282 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRS 341
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA +++GSEMSGG+ DV E++ ++ GVRIKTA GRG YV +I R +T+ ++
Sbjct: 342 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRV 401
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H D +DPKA+P I I+Y I V + R++G + P + + +
Sbjct: 402 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVTFHDMS 461
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
IG+ K V + C+ + G G V P PC+ L
Sbjct: 462 IGIVDKKHHV-FQCSFVQGQVIGYVFPVPCKNL 493
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 170/393 (43%), Positives = 248/393 (63%), Gaps = 6/393 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FGGVGDG+T NT+AF A+ +++ GG +L VPAG+WLT FNL + TL+L
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASIAE---RGGGRLVVPAGRWLTAPFNLTNRMTLFLAA 169
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L QD WP++ PLPSYG GR+ RY SLI G +L DV +TG NGTI+GQG
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F K L +TR L++ M + NI IS++TL +SP W +H ++ + TI+AP+
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+PDSC N I++CYI GDD +A+KSGWD+YGIAYG P+ ++I +T S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA +++GSEMSGG+ +V E++ ++ GVRIKTA GRG YV +I R +T+ ++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H D +DPKA+P+I+ I+Y I V + R++G + P + + +
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+G+ + V + C+ + G G V P PC L
Sbjct: 470 VGLVDRRNHV-FQCSFVQGQVIGYVFPVPCRNL 501
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 244/393 (62%), Gaps = 6/393 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FG VGDG+T NT AF+ AI +++ GG +L VPAG+WLT FNL SH TL+L
Sbjct: 103 LREFGAVGDGRTVNTAAFESAIAAIAE---RGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 159
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L QD WP++ PLPSYG GR+ RY SLI G +L V +TG NGTI+GQG
Sbjct: 160 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTINGQGQS 219
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F + L +TR L++ M + NI IS++TL +SP W +H N+ + TI+AP+
Sbjct: 220 WWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 279
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+PDSC N I++CYI GDD +A+KSGWD+YGIAYG P+ + I+ + S
Sbjct: 280 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRS 339
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA +++GSEMSGG+ DV E++ ++ GVRIKTA GRG YV ++ + +T ++
Sbjct: 340 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRV 399
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H D +DPKA+P I I+Y I V + R++G + P + + +
Sbjct: 400 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMS 459
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
IG+ K V + C+ + G G V P PC+ L
Sbjct: 460 IGIVDKKHHV-FQCSFVQGQVIGYVFPVPCKNL 491
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 237/381 (62%), Gaps = 29/381 (7%)
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
+T +T AF+ A+ + + + GGA LYVP G WLTG FNL SH TL+L + A + A+QD
Sbjct: 55 RTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDT 114
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL 248
+ WP+I+PLPSYGRGR+ GRY SLI G L DV++TGDNGTIDGQG+ WW + KG L
Sbjct: 115 SSWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTL 174
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
+TRP+L+E M + ++ +S++ +SP WN+HPVY S
Sbjct: 175 PFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCS----------------------- 211
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
+N IEDCYI +GDD +A+KSGWDEYG+AYG P+ + IRR+T SP+ A A+GSE
Sbjct: 212 ---SNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSE 267
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
SGG++ V AE + ++ G+ IKT GRGG+++++ V +T+ ++++ + G+ G H
Sbjct: 268 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 327
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
D+ YD ALPV+ G+ +++ N+ A ++GI+ F+ IC++N + A + P
Sbjct: 328 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVR--P 385
Query: 489 WTCADIGGMTSGVTPPPCELL 509
W C + G V P PC L
Sbjct: 386 WKCEAVSGAALDVQPSPCTEL 406
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 248/393 (63%), Gaps = 6/393 (1%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FGG+GDG+T NT AF+ A+ +S+ GG +L VPAG+WLT FNL S TL+L
Sbjct: 119 LREFGGIGDGRTLNTAAFEAAVAAISE---RGGGRLTVPAGRWLTAPFNLTSGMTLFLAS 175
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L QD WP++ PLPSYG GR+ RY SLI G +L DV VTG NGTI+GQG
Sbjct: 176 GAEILGIQDERYWPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTGHNGTINGQGKS 235
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW +F + L +TR L++ M + NI IS++TL +SP W +H N+ + TI+AP+
Sbjct: 236 WWTKFRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTISETTILAPI 295
Query: 299 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+PDSC N I++CYI GDD VA+KSGWD+YGIAYG P+ + IR +T S
Sbjct: 296 VGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRS 355
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
SA +++GSEMSGG+ +V E++ ++ GVRIKTA GRG YV +I R +T+ ++
Sbjct: 356 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 415
Query: 418 AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
+ +Y H D ++PKA+P++ I+Y I V + R++G + P + + +
Sbjct: 416 GIVIKTDYNEHPDEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVTFHDMS 475
Query: 478 IGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
+G+ K V + C+ + G G V P PC+ L
Sbjct: 476 VGILDKKHHV-FQCSYVQGQVIGYVFPVPCKNL 507
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/401 (41%), Positives = 244/401 (60%), Gaps = 9/401 (2%)
Query: 110 ISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI 169
+ R+ S +I D+G VGD T NT F + + +++G ++Y+P G +++G+FNL
Sbjct: 49 LPVRSKSFNIVDYGAVGDNVTVNTAVFNKIV---ALVAANGDGEIYIPPGIFVSGTFNLT 105
Query: 170 SHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAA-GRYTSLIFGTNLTDVIVTGD 228
SH TL L A L S + + +I LPSYGRGR+ + RY+SL+ G NL DV++T D
Sbjct: 106 SHVTLRLASGAVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVITSD 165
Query: 229 NG--TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
NG IDG G WW L YTR +L+E MYT +I + ++ L NSP W +HP S+N
Sbjct: 166 NGQGVIDGNGMGWWAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSSTN 225
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+LV +TI P+ SPNTDG +PDSC I++C GDDC+AVKSGWD GI YG+PT
Sbjct: 226 VLVSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTT 285
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+VIR +T +P SA IA+GSEMSGG+ ++ A+DI+A N SG+R+K+A GRGGY++++
Sbjct: 286 DVVIRNMTMHTPTSAAIAIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLT 345
Query: 407 VRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
G+T++ +K A + YG H YDP A+P+I I +IV +++ +G+
Sbjct: 346 FDGVTLNDVKTALSINDFYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDA 405
Query: 467 PFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCE 507
T + I+N ++ + +TC+ G V P C+
Sbjct: 406 KITNVAISNVSLAVVGSGS---YTCSYATGTQHAVVPVLCD 443
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 216/338 (63%), Gaps = 3/338 (0%)
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL+L + A L A+QD WP+++PLPSYGRGR+ RY S I G L DV++TGD G
Sbjct: 1 MTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGV 60
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
IDGQG +WW + + L++TRP L+EFM++ I IS++ L NSP WN+HPVY N++V
Sbjct: 61 IDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTN 120
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+ I+AP SPNTDG++PDS +N IED YI +GDD VA+KSGWDEYGIAYG P+ + +R
Sbjct: 121 MMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVR 180
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R+ SP+S IA+GSE SGG++DV ED ++ G+ IKT VGRGGY++++ V G+
Sbjct: 181 RVRGSSPFSG-IAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVR 239
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ ++ + G+ G H D H+ A+P + + ++ NV LEGI PFT I
Sbjct: 240 LTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRI 299
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
C++N + + W C D+ G GV P PC L
Sbjct: 300 CLSN--VKLFGWRSDAAWKCRDVRGAALGVQPSPCAEL 335
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/365 (43%), Positives = 232/365 (63%), Gaps = 1/365 (0%)
Query: 145 QYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGR 204
++ GGAQLYVP G WLTGSF+L SH TL+L DA ++ASQD + W V+ PLPSYGRG
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 205 DAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNI 264
D RY SLI G L DV+VTGDNGTIDGQG +WW +F LKY RP+L+EF+ ++N+
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
+S+LT LN+P+++++ +YSS++ + I + SP T GI PDS I++ I G
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI 384
D +++KSGWDEYGIAY PT+ + IR + ++I+ GSEMSGGI DV ++
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIH 241
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGI 444
+ +G+ +T GRGGY+K+I + + M + A G++GSH D+ YD ALP++ I
Sbjct: 242 YSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHI 301
Query: 445 NYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPP 504
+I +N+ +A +L GI PF+ + ++N ++ M++ W C+ + G + V P
Sbjct: 302 RLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVS-WQCSYVYGSSESVIPE 360
Query: 505 PCELL 509
PC L
Sbjct: 361 PCPEL 365
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/377 (42%), Positives = 234/377 (62%), Gaps = 8/377 (2%)
Query: 145 QYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGR 204
++ GGAQLYVP G WLTGSF+L SH TL+L A ++ASQD + W V+ PLPSYGRG
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 205 DAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNI 264
D RY SLI G L DV+VTGDNGTIDGQG +WW +F LKY RP+L+EF+ ++N+
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
+S+LT LN+P+++++ +YSS++ + I + SP T GI PDS I++ I G
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI 384
D +++KSGWDEYGIAY PT+ + IR + ++I+ GSEMSGGI DV ++
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIH 241
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGI 444
+ +G+ +T GRGGY+K+I + + M + A G++GSH D+ YD ALP++ I
Sbjct: 242 YSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHI 301
Query: 445 NYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPP 504
+I +N+ +A +L GI PF+ + ++N ++ M++ W C+ + G + V P
Sbjct: 302 RLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVS-WQCSYVYGSSESVIPE 360
Query: 505 PCELLPDQGPEKIRACD 521
PC PE R D
Sbjct: 361 PC-------PELKRDAD 370
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 213/329 (64%), Gaps = 3/329 (0%)
Query: 183 LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQ 242
+A D WP++ PLPSYG GR+ RY SLI G NL DV++TG NGTI+GQG WW++
Sbjct: 211 IADPDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKK 270
Query: 243 FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV-TSP 301
F + +L YTR L++ M++ +I I+ +TL +SP W +HP N+ ++G+TI+APV +P
Sbjct: 271 FRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAP 330
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
NTDGI+PDSC + IEDCYI GDD +A+KSGWD+YGIAYG P+ ++IR L S SA
Sbjct: 331 NTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSA 390
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
I++GSEMSGGI +V E++ ++ GVRIKTA GRGGYV+ I R +T ++ M
Sbjct: 391 GISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVM 450
Query: 422 TGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMA 481
+Y H D+ YDP ALPVI+ I++ ++ V + R+ G P + + ++G+
Sbjct: 451 KTDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFRDMSVGLT 510
Query: 482 AKHKKVPWTCADIGGMTSG-VTPPPCELL 509
K K + + CA + G G + P PCE L
Sbjct: 511 YKKKHI-FQCAFVHGRVIGTIFPSPCENL 538
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 52/67 (77%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++TDFGGVGDG T NT+AF+ A++ +S++ GGAQL VP G+WLT FNL SH TL+L
Sbjct: 75 NLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRWLTAPFNLTSHITLFLA 134
Query: 178 KDAFLLA 184
+DA +LA
Sbjct: 135 QDAVILA 141
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 199/285 (69%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG+T NT F++A+ + ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL + A ++ ++D ++W +++PLPSYG+G D R+ SLI G NLTDV++TG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WWQ +L ++RP L+EF+Y+++I IS+LT LNSP+W++HPVY SN+ V +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P TDGI PDSC+N IED I + +++KSGWD YGI++G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
+ +S A +A GSEMSGGI D+ ++ ++ G + VG
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGPPEEVLVG 324
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 200/286 (69%), Gaps = 5/286 (1%)
Query: 236 GALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII 295
G++WW++F L YTRP+L+E M + + IS+LT LNSP W +HP+Y S+++VQ +TI
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 296 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC 355
AP+ SPNTDGI+PDS + IEDCYI +GDD +A+KSGWDEYGI+YG P+K ++IRRL
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 356 ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+S+ IA+GSEMSGG+ DV AEDI N+ +G+RIKT+ GRGGYV++I++ +++ +
Sbjct: 121 -ETHSSGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANV 179
Query: 416 KWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIAN 475
K A TG YG H D YDPKA+P I+ I ++DI +N+++A +EGI GD F IC+ N
Sbjct: 180 KVAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYN 239
Query: 476 ATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQ-GPEKIRAC 520
T+ + + PW C+++ G +S V P CELL + P+ C
Sbjct: 240 ITLSVNSIS---PWNCSNVQGFSSLVFPQTCELLEESIFPDHCTEC 282
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 137/270 (50%), Positives = 193/270 (71%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R HS +IT+FG VGDG+T NT F++A+ + ++ GGAQLYVP G+WLTGSFNL SH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TLYL + A ++ ++D ++W +++PLPSYG+G D R+ SLI G NLTDV++TG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DGQG +WWQ +L ++RP L+EF+Y+++I IS+LT LNSP+W++HPVY SN+ V +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI + +P TDGI PDSC+N IED I + +++KSGWD YGI++G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIK 382
+ +S A +A GSEMSGGI D+ ++
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLR 309
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 221/346 (63%), Gaps = 8/346 (2%)
Query: 182 LLASQDLNE--WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW 239
LL+ D +E WP++ LPSYG GR+ R+ SLI G NL DV++TG NG+I+GQG +W
Sbjct: 107 LLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEVW 166
Query: 240 WQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVT 299
W + + L TRP L++ M++ +I ++++TL NSP W+ HP +NI V +TI+AP++
Sbjct: 167 WMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPIS 226
Query: 300 S-PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
S PNTDGI+PDSC + IE+CYI GDD +AVKSGWD+YGIAYG P++ +VIR + S
Sbjct: 227 SAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSL 286
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
SA I++GSEMSGGI +V ED++ + G+RIKTA+GRGGY++DI R +T ++
Sbjct: 287 VSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAG 346
Query: 419 FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ +Y HAD+ YD A P I I++++I V + R G S P I + +I
Sbjct: 347 IVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI 406
Query: 479 GMAAKHKKVPWTCADIGGMTSG-VTPPPCE---LLPDQGPEKIRAC 520
G++ K K + + C+ I G G V P PCE L +QG RA
Sbjct: 407 GISYKKKHI-FQCSFIEGRVIGSVFPKPCENLDLYNEQGQLVKRAA 451
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 225/393 (57%), Gaps = 10/393 (2%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++T FG +GDG+ +N+ A A+ + Q GG +Y+P G +L FN+ SH LYL
Sbjct: 75 NLTAFGAIGDGRHNNSLAMAAALEAVQQ---SGGGTIYIPPGDFLLAPFNMTSHLVLYLE 131
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ L A+ L +WP+I P+PSYG+GRD R+ S + G NLTDV VTG+NGTI+ G
Sbjct: 132 AGSILRATDRLADWPIIPPMPSYGQGRDHPGPRHASFLHGFNLTDVTVTGNNGTINATGD 191
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW + + G YTR +L E M++ +++S LTL +SP W VHPVYS + +TI+ P
Sbjct: 192 IWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHPVYSQDFRAIDLTILNP 251
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDG++PDS + I DCY +GDD VA+KSGWD YG + + + I S
Sbjct: 252 PYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFHS 311
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-HTMK 416
P +A I LGSEMSGGI +V A +I G RIKT +GRGGYV ++ V + + ++++
Sbjct: 312 PNAAGICLGSEMSGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQ 371
Query: 417 WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
A G+YG H Y+P A P + I+ + N + A L G+ F + N
Sbjct: 372 LAVGYNGHYGGHPAG-YNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQNV 430
Query: 477 TIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
I K WTC+DI G VTP C L
Sbjct: 431 HI-----TGKQGWTCSDISGTAQNVTPAACPSL 458
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 170/209 (81%)
Query: 186 QDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK 245
+D+ WP+I PLPSYGRGRD RY++ I G+NLTDVI+TG NGTI+G+G +WW +FH
Sbjct: 24 KDMKHWPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHA 83
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+LK+ R +L+E +Y++NI IS++T +N+P WN+HP Y +N+ + G+TI+APV SPNTDG
Sbjct: 84 KELKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDG 143
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P S + +IEDCYIVSGDDCVAVKSGWDEYGI + MP++ +VI+RLT +SP SA IAL
Sbjct: 144 IDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIAL 203
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKT 394
SEMSGGI+DVRA+D AINTES +R+KT
Sbjct: 204 SSEMSGGIRDVRAKDSVAINTESAIRVKT 232
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 150/174 (86%), Gaps = 1/174 (0%)
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
MSGGIQDVRAEDI AI+TESG+RIKTAVGRGGY KDIYV+ MTMHTMKW FWMTGNYGSH
Sbjct: 1 MSGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSH 60
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
AD +YDP ALP I+GINYRD+VAD V+MA LEGIS D FTGICIAN TI MAAK KK P
Sbjct: 61 ADKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQP 120
Query: 489 WTCADIGGMTSGVTPPPCELLPDQGPEKI-RACDFPTESLPIDMVEMKKCTYRI 541
WTC+D+ G+TSGVTP PC LLPDQGPEKI C+FPTE+LPIDM+E+KKCT I
Sbjct: 121 WTCSDVEGITSGVTPKPCNLLPDQGPEKITTTCEFPTETLPIDMLELKKCTSSI 174
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 200/297 (67%), Gaps = 3/297 (1%)
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLL 272
SLI G L DV++TGDNGTIDGQG+ WW + KG L +TRP+L+E M + ++ +S++
Sbjct: 2 SLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQ 61
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP WN+HPVY SN++++ +T++AP SPNTDGI+PDS +N IEDCYI +GDD +A+KS
Sbjct: 62 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 121
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
GWDEYG+AYG P+ + IRR+T SP+ A A+GSE SGG++ V AE + ++ G+ I
Sbjct: 122 GWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSETSGGVEHVLAEHLNFFSSGFGIHI 180
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVAD 452
KT GRGG+++++ V +T+ ++++ + G+ G H D+ YD ALPV+ G+ +++
Sbjct: 181 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 240
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
N+ A ++GI+ F+ IC++N + A + PW C + G V P PC L
Sbjct: 241 NIREAGSIKGIATSAFSRICLSNVKLNGGAAVR--PWKCEAVSGAALDVQPSPCTEL 295
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 245/415 (59%), Gaps = 36/415 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SITDFGGVGDGKTSNT AF+ A+ L ++++GGAQL VP G WL+GSFNL S+FTL+L
Sbjct: 73 SITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLE 132
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A +L S+DL+EWP+I+PLPSYGRGR+ GR+ SLI G NLT+V++T
Sbjct: 133 RGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVIT--------VSV 184
Query: 238 LWWQQFHKGKLKYTRPYLME-------FMYTDNIQISSLTLLNSPSWNVHPVYSS--NIL 288
L + K K+ LM+ + T++ I LLNS + + +S +IL
Sbjct: 185 LRFSVMIKEKMGQ----LMDRGKCGGSYGGTEHWCIREAILLNSRTLIISSSLTSLCSIL 240
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
+ G +I+ DS TN IEDCYI SGDD VAVKSGWD+YG+A P+ +
Sbjct: 241 LSGQSIL----------FIADSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNI 290
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
VIRR++ + + + +GSEMSGGI ++ EDI ++ +G+RIKT GRGGY+ +I
Sbjct: 291 VIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFN 350
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+ + +K + H+D+ +DPKALP ++GI ++V+ N A L G+ G F
Sbjct: 351 NVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSF 410
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPC-ELLPDQGPEKIRACDF 522
+C+ N T+ K +K W C D+ G S V P C +LL +G I C +
Sbjct: 411 QDVCLRNVTLLGLPKTEK--WKCKDVSGYASDVFPLSCPQLLQKKG--SIAQCSY 461
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 128/288 (44%), Positives = 191/288 (66%), Gaps = 4/288 (1%)
Query: 223 VIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
V+ +G+NGTIDGQG +WW+ + L +TR +L+E + + NI IS+LT NSP W +HPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
Y SN++++ +TI+AP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWD+YGI
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
P+ +VIRR++ +P + + +GSEMSGGI ++ ED+ ++ +G+RIK+ GRGGY+
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEG 462
++ + M+ +K A + H D +DPKA+P ++GI ++++ N + A L G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 463 ISGDPFTGICIANATI-GMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
I+G + G+C+ N TI G+ K W CA + G ++ V P PC L
Sbjct: 276 IAGTSYDGVCMKNVTILGLTPSAK---WHCAFVSGFSTSVFPTPCPQL 320
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 184/285 (64%), Gaps = 2/285 (0%)
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
NGTIDGQG +WW+ + L +TR +L+E + + N+ IS++TL NSP W VHPVY N++
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
++ +TI+AP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWD+YGI+ G P+ +
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
+I+R++ +P + + GSEMSGGI +V D+ N+ S VR+KT VGRGGY+ +I +
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
+TM +K + H+D+ YD ALP+I GI+ DIV +V A LE + G +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQG 513
GIC N + + A ++V W C + G V P PCE L + G
Sbjct: 246 EGICFRN--VSLRAIRRQVRWQCESVYGEAHEVFPAPCEELRNNG 288
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 217/409 (53%), Gaps = 36/409 (8%)
Query: 128 GKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL--------ISHFTLYLHKD 179
G+ +T AF+ AI+ + S+GG +L +P GSFNL SH L+L K+
Sbjct: 23 GRRDDTAAFEQAIDIIR---SNGGGRLIIPGAP--DGSFNLYRIRPINLTSHLVLFLQKN 77
Query: 180 AFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDN---GTIDGQG 236
A + A D + WP+I PLPSYG+GRD RY+SL+ G LT++ + G+ G IDGQG
Sbjct: 78 AVITAIADESVWPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNITIRGEPDSPGIIDGQG 137
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW + + +YTR +L+EFMY+ I++ +L L NSP W H ++ VQ + + A
Sbjct: 138 RYWWDRRRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKA 197
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P +SPNTDG +PDS N IED GDDCVA+KSGWD +GI Y P++ + IR +TC
Sbjct: 198 PWSSPNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQ 257
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM------ 410
PY A IA+G+EMSGG+++V E++ IKT RGGYV D+ + +
Sbjct: 258 GPY-AGIAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHI 316
Query: 411 --TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA----RLEGIS 464
+H + + T N N+Y P LP ++ + + + + G+
Sbjct: 317 DQAIHVDMYHYHNTPN--PSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLP 374
Query: 465 GDPFTGICIANATIGMAAKHKKVPWTCADIGG--MTSGVTP-PPCELLP 510
P + + N I + W C+++ G + VTP PPC P
Sbjct: 375 ESPIEYVFLEN--ISFPTPVSSLGWNCSNVQGSVKNNSVTPWPPCPEFP 421
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 207/359 (57%), Gaps = 19/359 (5%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+ITDFG V DGKT T+AFK A+ + + GG +YVPAGK+LTG +L+S+ L++
Sbjct: 8 NITDFGAVPDGKTLCTEAFKKAVKKCEEA---GGGTIYVPAGKFLTGPIHLVSNTNLHID 64
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL SQ++ ++P++ Y R A Y+ LI+G + +V +TG +GT+DGQG
Sbjct: 65 AGAVLLFSQNIEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITG-HGTLDGQGE 118
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+ + +LKY RP + F ++ + I + ++NSP+W ++PV +N+++ GITI P
Sbjct: 119 PWWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNP 178
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDGINPDSC N RI +CYI GDDCVA+KSG EY Y +P + + I T +
Sbjct: 179 ADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGV-EYS-KYRIPCENITITNCTMLD 236
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + +GSEMSG ++++ + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 237 GHGG-VVIGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMC 295
Query: 418 AFWMTGNY----GSHADNHYDPKALPVIQGIN-YRDIVADNVSMAARLEGISGDPFTGI 471
M Y G D PV +G +R + N+S AR G F G+
Sbjct: 296 PLVMNMYYFCGKGGKEPIVKDKNPHPVNEGTPVFRRVHLSNIS--AREAGACAGFFYGL 352
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 170/261 (65%), Gaps = 3/261 (1%)
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS-PNTDGINPD 309
TRP L++ M++ +I ++++TL NSP W+ HP +NI V +TI+AP++S PNTDGI+PD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
SC + IE+CYI GDD +AVKSGWD+YGIAYG P++ +VIR + S SA I++GSEM
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 370 SGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
SGGI +V ED++ + G+RIKTA+GRGGY++DI R +T ++ + +Y HA
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
D+ YD A P I I++++I V + R G S P I + +IG++ K K + +
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-F 239
Query: 490 TCADIGGMTSG-VTPPPCELL 509
C+ I G G V P PCE L
Sbjct: 240 QCSFIEGRVIGSVFPKPCENL 260
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 205/376 (54%), Gaps = 25/376 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG VG+G+ +T+AFK AI + GG +YVPAG +LTG +L S+ TLY+
Sbjct: 4 NVRDFGAVGNGQVKDTEAFKKAIEASWE---QGGGTVYVPAGVYLTGPIHLKSNITLYIE 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L S DL+++P++ Y R Y+ LI+ N ++ V G GTIDGQG
Sbjct: 61 SGATLKFSNDLDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVGF-GTIDGQGE 114
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+WW+ +LKY RP + F N+ I + ++NSPSW V+P+ N+ V + I P
Sbjct: 115 MWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQNP 174
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDGINP+SC RI +CYI GDDCV +KSG ++ + +P + + I CI
Sbjct: 175 YDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVR--IPCENIAI--TNCIM 230
Query: 358 PYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM- 415
+ I +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 231 AHGHGGIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVI 290
Query: 416 -KWAFWMTGNYGSHADNH--YDPKALPV------IQGINYRDIVADNVSMAA-RLEGISG 465
+AF+M + G +D PV ++ I D++ AA L G++
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVIVRQARAAAGFLYGLTE 350
Query: 466 DPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 351 MPIEDVVFSNVTVEMA 366
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 197/371 (53%), Gaps = 32/371 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ D+G +G+ T T+AF+ AI+ S GG ++ VPAG +++G L S+ +
Sbjct: 11 NVNDYGAIGN-HTLCTEAFQKAIDTASDR---GGGKVIVPAGDYVSGPLFLRSNIEFEVC 66
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A + S D+ P+I G Y SL G +L +V +TG G IDGQG
Sbjct: 67 SGATIYFSNDIANTPIIN-----GSWEGIERKVYASLFTGHDLKNVTITG-RGRIDGQGK 120
Query: 238 LWWQQF--------------------HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSW 277
WW F LKY RP ++ +N++I+ LT+ NSPSW
Sbjct: 121 AWWDAFWETDKMRTAAGIREREPENPEGSPLKYPRPRMINLYRCENVKIADLTITNSPSW 180
Query: 278 NVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
VHPVY N+++ GI+II P SPNTDGI+PD C RI +CYI GDDC+ +KSG++E+
Sbjct: 181 TVHPVYCRNVIIDGISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGDDCITLKSGYNEH 240
Query: 338 GIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
G G+P + +VI T SA + +GSEMSGGI++V + T G+R+KT G
Sbjct: 241 GRKKGIPCENIVISNCTFAHGRSA-VGIGSEMSGGIKNVTVMNCVFKGTLRGLRVKTGRG 299
Query: 398 RGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD-PKALPVIQGINYRDIVADNVSM 456
RGG V++I+ G+ M ++ + Y + Y ++ P + I ++DI+ NV
Sbjct: 300 RGGTVENIFASGIIMENLREGISIDMGYEGVSGKIYPVTESTPFFKNIRFKDIIGTNVEQ 359
Query: 457 AARLEGISGDP 467
A + G++ P
Sbjct: 360 AINIIGLAEAP 370
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 157/237 (66%), Gaps = 3/237 (1%)
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP WN+HPVY SN++++ +T++AP SPNTDGI+PDS +N IEDCYI +GDD +A+KS
Sbjct: 15 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 74
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
GWDEYG+AYG P+ + IRR+T SP+ A A+GSE SGG++ V AE + ++ G+ I
Sbjct: 75 GWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSETSGGVEHVLAEHLNFFSSGFGIHI 133
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVAD 452
KT GRGG+++++ V +T+ ++++ + G+ G H D+ YD ALPV+ G+ +++
Sbjct: 134 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 193
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
N+ A ++GI+ F+ IC++N + A + PW C + G V P PC L
Sbjct: 194 NIREAGSIKGIATSAFSRICLSNVKLNGGAAVR--PWKCEAVSGAALDVQPSPCTEL 248
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 143/222 (64%), Gaps = 43/222 (19%)
Query: 95 ESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQL 154
E R A LD FEY AISCR HSA +TDFGGVGDGKTSNTKAF+ AI+ LS Y+SDGGA L
Sbjct: 149 ECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALL 208
Query: 155 YVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSL 214
VP GKWLTGSFNL SHFTL+L K+A +L SQD +EWP + LPSYGRGRDA G
Sbjct: 209 VVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDG----- 263
Query: 215 IFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNS 274
PY++E M+ D+IQIS+LTL+NS
Sbjct: 264 --------------------------------------PYMIEIMFFDHIQISNLTLINS 285
Query: 275 PSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
S VHP+YSS+I++QG+TI+AP+ SPNTDGI+ + + I
Sbjct: 286 LSLFVHPIYSSDIIIQGLTILAPIDSPNTDGIDLEDSVSVLI 327
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 133/179 (74%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
Y CR H A +T++G VGDG+T NT AF A+ L++ + DGGA L VP GKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S FTLYL + A +LASQD+ WP+I PLPSYGRGRD RY++ I G+NLTDVI+T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
G NGTI+GQG +WW +FH +LK+TR +L+E +Y+DNI IS++T +++P WN+HP Y +
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCT 213
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 145/200 (72%), Gaps = 1/200 (0%)
Query: 217 GTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPS 276
G L DV++ G+NGTIDGQG +WW + +G L +TRP L+EFM + I IS++ NSP
Sbjct: 8 GDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVIFKNSPF 67
Query: 277 WNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
WN+ PVY SN++++ +TI+AP SPNTDGI+PDS +N IED +I +GDD VAVKSGWDE
Sbjct: 68 WNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDE 127
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAV 396
YGI YG P+ + IRR+T SP+ A IA+GSE SGG++ V AE+I N+ GV IKT +
Sbjct: 128 YGIGYGRPSSHITIRRVTGSSPF-AGIAVGSETSGGVEHVLAENIVIYNSGIGVNIKTNI 186
Query: 397 GRGGYVKDIYVRGMTMHTMK 416
GRGG++K+I V + M ++
Sbjct: 187 GRGGFIKNITVSPVFMENVR 206
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 202/377 (53%), Gaps = 25/377 (6%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ +FG G+G +T+AFK AI + + GG ++VPAG + TG +L S+ TLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L SQD+ ++P++ Y R Y+ LI+ N +V V G GTIDGQG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQG 113
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITI--TNCI 229
Query: 357 SPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 230 MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNV 289
Query: 416 --KWAFWMTGNYGSHA------DNHYDP--KALPVIQGINYRDIVADNVSMAA-RLEGIS 464
+AF+M + G D P PV++ I D+V AA L G++
Sbjct: 290 MCPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLT 349
Query: 465 GDPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 350 EMPIEDVVFSNVTVEMA 366
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 164/253 (64%), Gaps = 3/253 (1%)
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS-PNTDGINPDSCTNTRIE 317
M++ +I ++++TL NSP W+ HP +NI V +TI+AP++S PNTDGI+PDSC + IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
+CYI GDD +AVKSGWD+YGIAYG P++ +VIR + S SA I++GSEMSGGI +V
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA 437
ED++ + G+RIKTA+GRGGY++DI R +T ++ + +Y HAD+ YD A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 438 LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGM 497
P I I++++I V + R G S P I + +IG++ K K + + C+ I G
Sbjct: 181 FPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-FQCSFIEGR 239
Query: 498 TSG-VTPPPCELL 509
G V P PCE L
Sbjct: 240 VIGSVFPKPCENL 252
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 202/377 (53%), Gaps = 25/377 (6%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ +FG G+G +T+AFK AI ++ GG ++VPAG + TG +L S+ TLY+
Sbjct: 3 VNVVEFGAKGNGIDKDTEAFKRAIEACEKH---GGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L SQD+ ++P++ Y R Y+ LI+ N +V V G GTIDGQG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V + I
Sbjct: 114 EKWWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITI--TNCI 229
Query: 357 SPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 230 MAHGHGGVVIGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNV 289
Query: 416 --KWAFWMTGNYGSHA------DNHYDP--KALPVIQGINYRDIVADNVSMAA-RLEGIS 464
+AF+M + G D P PV++ I D+V AA L G++
Sbjct: 290 MCPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLT 349
Query: 465 GDPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 350 EMPIEDVVFSNVTVEMA 366
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 147/218 (67%), Gaps = 6/218 (2%)
Query: 105 FEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ-LYVPAGKWLT 163
F A R AS+ +FG VGDG T NT AF+ A+ +L + GG L VP G+WLT
Sbjct: 76 FYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLT 135
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
GSFNL S FTL+LH+ A +L SQD EWP+I PLPSYGRGR+ R+ SLI G L DV
Sbjct: 136 GSFNLTSRFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDV 195
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
++TG NGTIDGQG +WW+ + L +TR +L+E + + N+ ISS+TL NSP W VHPVY
Sbjct: 196 VITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVY 255
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
SN++++ +TI+AP+ +PNTDGI+P C + CY
Sbjct: 256 CSNVVMKDLTILAPLDAPNTDGIDPGLCAS-----CYF 288
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 203/376 (53%), Gaps = 25/376 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG G+G +T+AFK AI + +GG +YVPAG + G+ +L S+ TLY+
Sbjct: 4 NVCDFGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHVGALHLKSNMTLYIE 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L SQD ++P++ Y R Y+ LI+ + +V V G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGE 114
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V I I P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITI--TNCIM 230
Query: 358 PYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM- 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 231 AHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 416 -KWAFWMTGNYGSHA------DNHYDP--KALPVIQGINYRDIVADNVSMAA-RLEGISG 465
+AF+M + G D P ++ P+++ I D+V AA L G++
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 466 DPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 351 MPIEDVVFSNVTVEMA 366
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 203/377 (53%), Gaps = 25/377 (6%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ +FG G+G +T+AFK AI + + GG ++VPAG + G+ +L S+ TLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L SQD ++P++ Y R Y+ LI+ N +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQG 113
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITI--TNCI 229
Query: 357 SPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 230 MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNV 289
Query: 416 --KWAFWMTGNYGSHA------DNHYDP--KALPVIQGINYRDIVADNVSMAA-RLEGIS 464
+AF+M + G D P ++ P+++ I D+V AA L G++
Sbjct: 290 MCPFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLT 349
Query: 465 GDPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 350 EMPIEDVVFSNVTVEMA 366
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 201/377 (53%), Gaps = 25/377 (6%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ +FG G+G +T+AFK AI + + GG ++VPAG + G+ +L S+ TLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L SQD ++P++ Y R Y+ LI+ N +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQG 113
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITI--TNCI 229
Query: 357 SPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 230 MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNV 289
Query: 416 --KWAFWMTGNYGSHADNH--YDPKALPV------IQGINYRDIVADNVSMAA-RLEGIS 464
+AF+M + G +D PV ++ I D+V AA L G++
Sbjct: 290 MCPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVVVREARAAAGFLYGLT 349
Query: 465 GDPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 350 EMPIEDVVFSNVTVEMA 366
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 202/377 (53%), Gaps = 26/377 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF + DG + +TKAF+ AI + GG + VP G +LTG LIS+ +
Sbjct: 7 SLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVVPPGTYLTGPIRLISNLVFEIQ 63
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL + D+ ++P + R + Y I+G NLT+VI+TG +GT+DGQG
Sbjct: 64 AGATLLFTDDVEQFPTVD-----SRWEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQGT 117
Query: 238 LWWQQFHKG---KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
WW+ H+ KL Y RPYL+ F Y+ I IS L L SPSW VHP+ ++ +Q I+I
Sbjct: 118 NWWK-LHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
+ P SPNTDGI+P+SC N RI +C I GDDC+A+KSG ++ + + + I T
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT 235
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
+ + A + LGSEMSG I++V + T+ G+R+KT GRGG V++I V + M
Sbjct: 236 MVHGHGA-VVLGSEMSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMED 294
Query: 415 MKWAFWMTGNY--GSHADNHY----DP----KALPVIQGINYRDIVADNVSMAA-RLEGI 463
+ F + Y G Y +P K P + I++ +IVA V AA + G+
Sbjct: 295 VLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGL 354
Query: 464 SGDPFTGICIANATIGM 480
P + N I M
Sbjct: 355 PEMPVQDVSFTNIQIEM 371
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 201/376 (53%), Gaps = 25/376 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ +FG G+G +T+AFK AI + +GG +YVPAG + G+ +L S+ TLY+
Sbjct: 4 NVCNFGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHIGALHLKSNMTLYIE 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L SQD ++P++ Y R Y+ LI+ + +V V G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVGF-GTIDGQGE 114
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V I I P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITI--TNCIM 230
Query: 358 PYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM- 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 231 AHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 416 -KWAFWMTGNYGSHADNH--YDPK------ALPVIQGINYRDIVADNVSMAA-RLEGISG 465
+AF+M + G +D PV++ I D+V AA L G++
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPVVRRIYISDVVVRQARAAAGFLYGLTE 350
Query: 466 DPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 351 MPIEDVVFSNVTVEMA 366
>gi|297827255|ref|XP_002881510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327349|gb|EFH57769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 122/149 (81%)
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IKTA+GRGGYVKD+YVRGMTM+TMK+ FWMTG+YGSH D HYDPKALPVIQ INY+D+VA
Sbjct: 1 IKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVA 60
Query: 452 DNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPD 511
+NV+M A+L GISGD FTGICI+N TI ++ K KKV W C D+ G TSGVTP PC+LLP+
Sbjct: 61 ENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE 120
Query: 512 QGPEKIRACDFPTESLPIDMVEMKKCTYR 540
+ P I C+FP + +PID V++++C R
Sbjct: 121 KQPGTIVPCNFPEDPIPIDEVKLQRCYSR 149
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 200/377 (53%), Gaps = 25/377 (6%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ +FG G+G T+AFK AI + + GG ++VPAG + G+ +L S+ TLY+
Sbjct: 3 VNVREFGAKGNGIDKVTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L SQD ++P++ Y R Y+ LI+ N +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITI--TNCI 229
Query: 357 SPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 230 MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNV 289
Query: 416 --KWAFWMTGNYGSHADNH--YDPKALPV------IQGINYRDIVADNVSMAA-RLEGIS 464
+AF+M + G +D PV ++ I D+V AA L G++
Sbjct: 290 MCPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLT 349
Query: 465 GDPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 350 EMPIEDVVFSNVTVEMA 366
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 211/397 (53%), Gaps = 29/397 (7%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I FG VGDG +NT A K A+ SQ GG +YVPAG ++TG+ + S+ L+L
Sbjct: 10 NIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTIYVPAGVFVTGAIEMKSNMHLHLE 66
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ LL S D ++PVI R A+ Y S I+ + ++ +TG GT++GQGA
Sbjct: 67 AGSELLFSNDRADYPVIS-----SRWEGASRDVYMSCIYACHAENIAITG-FGTLNGQGA 120
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+ F + L Y RP L+ F + + + I + +++SPSW VHP N+ + G++I+ P
Sbjct: 121 YWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTISGVSIVNP 180
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDGINP+SC N +I DC I GDDC+A+K+G ++ A +P + + I T +
Sbjct: 181 ANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERA--IPCENITITNCTMLH 238
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + GSEMSG I++V + T+ G+R K+ GRGG +++I V + M+ +
Sbjct: 239 GHGGVV-FGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVIC 297
Query: 418 AFWMTGNY--GSHADNHY--DPKALPV------IQGINYRDIVADNVSMAA-RLEGISGD 466
F + Y G Y D + PV + I++ +I A +V+ AA + G+
Sbjct: 298 PFILNLYYYHGPRGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEM 357
Query: 467 PFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTP 503
P I ++ I M + D+ M G+ P
Sbjct: 358 PVEDITFSHIRIAMKLDAEP------DLPAMMEGLQP 388
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 202/374 (54%), Gaps = 23/374 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I FG VGDG +NT A K A+ SQ GG +YVPAG ++TG+ L S+ L+L
Sbjct: 9 NIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTVYVPAGVFVTGAIELKSNMHLHLE 65
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ LL S D ++PVI R A+ Y S I+ + ++ +TG GT++GQGA
Sbjct: 66 AGSELLFSNDREDYPVIS-----SRWEGASRDVYMSCIYACHAKNIAITG-FGTLNGQGA 119
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+ F + L Y RP L+ F + + + + + +++SPSW VHP N+ + ++I+ P
Sbjct: 120 YWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTISAVSIVNP 179
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDGINP+SC N RI DC I GDDC+A+KSG ++ +P + + I T +
Sbjct: 180 ANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTED--AERVIPCENITITNCTMLH 237
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + GSEMSG I++V + T+ G+R K+ GRGG +++I V + M+ +
Sbjct: 238 GHGGVV-FGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNIIC 296
Query: 418 AFWMTGNY--GSHADNHY--DPKALPV------IQGINYRDIVADNVSMAA-RLEGISGD 466
F + Y G Y D + PV + I++ +I A +V+ AA + G+
Sbjct: 297 PFILNLYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEM 356
Query: 467 PFTGICIANATIGM 480
P I ++ I M
Sbjct: 357 PVEDITFSHIRIAM 370
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 200/377 (53%), Gaps = 26/377 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF + DG + +TKAF+ AI + GG + P G +LTG LIS+ +
Sbjct: 7 SLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVAPPGTYLTGPIRLISNLVFEIQ 63
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL + D+ ++P++ R + Y I+G NLT+VI+TG +GT+DGQG
Sbjct: 64 AGATLLFTDDVEQFPIVD-----SRLEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQGT 117
Query: 238 LWWQQFHKG---KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
WW+ H+ KL Y RPYL+ F Y+ I IS L L SPSW VHP+ ++ +Q I+I
Sbjct: 118 NWWK-LHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
+ P SPNTDGI+P+SC N RI +C I GDDC+A+KSG ++ + + + I T
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT 235
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
+ + A + LGSEMS I++V + T+ G+R+KT GRGG V++I V + M
Sbjct: 236 MVHGHGA-VVLGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMED 294
Query: 415 MKWAFWMTGNY--GSHADNHY----DP----KALPVIQGINYRDIVADNVSMA-ARLEGI 463
+ F + Y G Y +P K P + I++ +IVA V A + G+
Sbjct: 295 VLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGL 354
Query: 464 SGDPFTGICIANATIGM 480
P + N I M
Sbjct: 355 PEMPVQDVSFTNIQIEM 371
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 197/377 (52%), Gaps = 29/377 (7%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ +FG G+G +T+AFK AI + + GG ++VPAG + G+ +L S+ TLY+
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L SQD E Y R Y+ LI+ N +V V G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEE---------YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQG 109
Query: 237 ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
WW+ +LKY RP + F +N+ I + ++NSPSW V+P+ N+ V + I
Sbjct: 110 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 169
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P SPNTDGINP+SC RI +CYI GDDCV +KSG ++ +P + + I CI
Sbjct: 170 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITI--TNCI 225
Query: 357 SPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + +GSEMSGG+++V + T+ G+RIKT GRGG V+DI V + M +
Sbjct: 226 MAHGHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNV 285
Query: 416 --KWAFWMTGNYGSHADNH--YDPKALPV------IQGINYRDIVADNVSMAA-RLEGIS 464
+AF+M + G +D PV ++ I D+V AA L G++
Sbjct: 286 MCPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLT 345
Query: 465 GDPFTGICIANATIGMA 481
P + +N T+ MA
Sbjct: 346 EMPIEDVVFSNVTVEMA 362
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 132/186 (70%)
Query: 194 IKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRP 253
+ PLPSYGRG D GRY SLI+G NL+DV++TGDNG IDGQG++WW L Y+RP
Sbjct: 1 MDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRP 60
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
+++E + +DNI IS+LT LNSP+W++HPVY SNI +Q IT+ AP P T GI PDS +
Sbjct: 61 HIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEH 120
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
I++C I +G D + +KSGWDEYG+AYG PT + IR + S A +A GSEMSGGI
Sbjct: 121 VCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGI 180
Query: 374 QDVRAE 379
D+ AE
Sbjct: 181 SDIIAE 186
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 48/400 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ FG +GDGK+ +T+A + AI+ + + G LYVPAG + T L S TLYL
Sbjct: 133 NVKQFGAIGDGKSDDTRALQRAIDAVPK-----GGTLYVPAGTYYTAPLQLKSDMTLYLA 187
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K A LL S +++ + KP+ S G + RY SLI G N+ +V +TG+ G IDG G
Sbjct: 188 KGATLLGSSNIDAY---KPIWSRWEGTEMY--RYMSLITGDNVRNVTITGE-GVIDGNGE 241
Query: 238 L------------WWQQFHKGKLK-----------------YTRPYLMEFMYTDNIQISS 268
WW + +K L Y RP L+EF+++ NI I
Sbjct: 242 TPIHDNAGNTYGNWWSKQYKEPLSDPAVSLVQSPNYSQGLPYARPSLIEFLHSQNILIQG 301
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+T+ NSPSW +HPVY ++ + + I+ P TS NTDG++PDS +I D GDD +
Sbjct: 302 VTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQIIDDTFSVGDDDI 361
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTES 388
A+KSG D G G+P++ +V+R ++ + +++GSEMSGG+Q+V E+ T +
Sbjct: 362 AIKSGKDAEGRRIGIPSQNIVVRNCHMLNGHG--VSIGSEMSGGVQNVLVENCDFDGTNA 419
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMK-WAFWMTGNYGSHADNHYDP----KALPVIQG 443
G+RIKT GRGG V++I ++M ++ AF + NY S+ + P A P I+
Sbjct: 420 GLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASNG-SALPPGPVTDATPAIRN 478
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
+N+ +I + A G++ P I N I A
Sbjct: 479 LNFDNITVNGAKQAMYFSGLAELPIQNIAFHNVAINGAGS 518
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 142/214 (66%), Gaps = 15/214 (7%)
Query: 108 NAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFN 167
N R HS SIT+FG VGD T NTKAF++AI L Y+ GGA+L+VPAG+W TGSF+
Sbjct: 33 NIKEVRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLFVPAGRWFTGSFD 92
Query: 168 LISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
LISH TL L KDA +L S + +WPV+ P PSYGRGR+ G + SLI+G NLTDVI+TG
Sbjct: 93 LISHLTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGRELPGGWHRSLIYGCNLTDVIITG 152
Query: 228 DNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
+NGTIDGQ ++WW +E M + N+ IS++T LNSP W +H VY S++
Sbjct: 153 NNGTIDGQRSIWW---------------IESMNSKNVLISNVTFLNSPFWTMHHVYCSHV 197
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
VQ +TI+AP PNTDGI+ S ++ YI
Sbjct: 198 TVQNVTILAPFGLPNTDGIDSYSLIMYALKTGYI 231
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 126/169 (74%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
Y CR H A +T++G VGDG+T NT AF A+ L++ + DGGA L VP GKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S FTLYL + A +LASQD+ WP+I PLPSYGRGRD RY++ I G+NLTDVI+T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSP 275
G NGTI+GQG +WW +FH +LK+TR +L+E +Y+DNI IS++T +++P
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 199/376 (52%), Gaps = 25/376 (6%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I FG DG+T +T A AI + + GG +Y+PAG++LTG L SH L+L
Sbjct: 10 IRTFGAQPDGETPSTAAITAAIETCA---AAGGGVVYIPAGRFLTGPLRLKSHVRLHLEA 66
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A LL SQD ++PV++ + G++ Y I+G +L V +TG GTIDG+G
Sbjct: 67 GAHLLFSQDPADYPVLE---TRWEGKEVLT--YAHQIYGEDLEGVAITG-RGTIDGRGET 120
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
WW+ F + RP L+ F +I I +TL+NSP+W ++PV + + +TII P
Sbjct: 121 WWRLFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPP 180
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
SPNTDGI+PDS N I +CYI GDDC+A+K+G ++ Y P + +VI C+
Sbjct: 181 DSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVI--ANCLMR 236
Query: 359 YS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + +GSE SGGI+ V + +T+ G+R+K+ GRGG+V+D+ + M +
Sbjct: 237 HGHGGVVIGSETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLC 296
Query: 418 AFWMTGNYGSHA----------DNHYDPKALPVIQGINYRDIVADNV-SMAARLEGISGD 466
F + Y + + H +A P + +++ I A V + AA L G+
Sbjct: 297 PFVLNMYYDTGGGVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQ 356
Query: 467 PFTGICIANATIGMAA 482
P + + I +AA
Sbjct: 357 PLEDVLFDDIWIELAA 372
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 173/300 (57%), Gaps = 8/300 (2%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
A++ + S+ +G DG T +T AF+ A+ ++ L P + L NL
Sbjct: 1 AVTTAKETISVASYGARCDGATEDTAAFEAALAHAGAHAHT--TILVPPGARCLIAPINL 58
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
SH TL + +A + D WP+I PSYG+GRD RYTSL+ G ++ DV + G+
Sbjct: 59 TSHTTLRIAANATVAGVADAARWPLIPGAPSYGQGRDHPGPRYTSLVHGEHVEDVTIQGE 118
Query: 229 NGT--IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
T +DG G WW Q H + TR +L+EFMY+ +I+I L++ +SP WN H S
Sbjct: 119 GPTSVLDGNGQYWWDQVHS--MTVTRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSER 176
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ V+ + I A SPNTDG +PDS + +E V GDDCVA+KSGWD +G+AYG P++
Sbjct: 177 VHVRNVHISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSR 236
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV-RIKTAVGRGGYVKDI 405
+ IR + C A IA+GSEMSGG++DV + + + +G+ +KT RGGYV+++
Sbjct: 237 NITIRDVNCTGS-KAGIAIGSEMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQL-YVPAGKWLTGSFNLISH 171
R S+ FG GDG+T NT AF A+ ++++ G L YVP G WLTG FNL SH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL+L + A + A+QD + WP+I PLPSYGRGR+ GRY SLI G L DV +TG+NGT
Sbjct: 100 MTLFLARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITGENGT 159
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
IDGQG +WW + K L +TRP+L+E MY+ ++ +S+L +SP WN+HPVY SN+++
Sbjct: 160 IDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIAN 219
Query: 292 ITIIAPVTSPNTDGIN 307
+T++AP SPNTDGI+
Sbjct: 220 LTVLAPHDSPNTDGID 235
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 203/377 (53%), Gaps = 25/377 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G V DG T T A A + S+ GG ++VP+G +LTG+ L S+ L++
Sbjct: 5 NIVDYGAVQDGTTLATGAIASA---IEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHVS 61
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L S +L ++PV++ R + S I+G NL ++ VTG +GT+DG G
Sbjct: 62 PGATLSFSTELADYPVVE-----SRWEGVQREVHASCIYGENLENISVTG-SGTLDGNGQ 115
Query: 238 LWWQQF--HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII 295
WWQ+ H +L+Y RP L+ F + I + L NSPSW V+P+ N+ + ++I+
Sbjct: 116 PWWQKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 296 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC 355
P SPNTDGINP+SC+N RI +C I GDDC+A+K+G ++ +P + + I T
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 233
Query: 356 ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + A + LGSEMSG I++V + T+ G+R+K+ GRGG ++DI V + M +
Sbjct: 234 VHGHGA-VVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDV 292
Query: 416 KWAFWMTGNY--GSHADNHY----DPKAL----PVIQGINYRDIVADNVSMAA-RLEGIS 464
F + Y G + Y +P + P + I++ DI A V AA L G++
Sbjct: 293 ICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLA 352
Query: 465 GDPFTGICIANATIGMA 481
I +N I MA
Sbjct: 353 EQYIAEITFSNIDISMA 369
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 118/165 (71%), Gaps = 2/165 (1%)
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
+ DV D+ INT+S +RIKTAVGRGGYVK+I+ R TM TMK+ FWMTG+Y H
Sbjct: 948 LTDVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTMKYVFWMTGSYKLHPVGG 1007
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
+DPKALP I INYRD+ A+NV+++A+LEGI DPFTG+C++N TI ++ KK+ W C
Sbjct: 1008 FDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSNVTIALSPDPKKLQWNCT 1067
Query: 493 DIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKC 537
D+ G+TS V P PC LLPD+G CDFPT+ +PI+ V + KC
Sbjct: 1068 DVSGVTSRVKPEPCSLLPDKG--TTMDCDFPTDKIPIESVVLNKC 1110
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 7/133 (5%)
Query: 106 EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGS 165
EY A++CR H A +TDFG +GDGKTSNTKAF++AI +L+ + DGG QL VP G WLTGS
Sbjct: 840 EYLALNCRKHRAVLTDFGAIGDGKTSNTKAFREAITKLTTKAVDGGVQLIVPPGNWLTGS 899
Query: 166 FNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIV 225
FNL SHFTL++ + A +LASQD +E+P+I PLPSYG R+TSLI+G+NLTDV++
Sbjct: 900 FNLTSHFTLFIQQGATILASQDESEYPMIPPLPSYGE------ARFTSLIYGSNLTDVVI 953
Query: 226 TGDNGTIDGQGAL 238
T D I+ Q A+
Sbjct: 954 T-DVTLINTQSAI 965
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 205/378 (54%), Gaps = 27/378 (7%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSD-GGAQLYVPAGKWLTGSFNLISHFTLYL 176
+I D+G V DG TK +AI + +S+ GG ++VPAG +LTG+ L S+ L++
Sbjct: 5 NIVDYGAVQDG----TKMATEAIAAAIEAASNAGGGTVFVPAGTYLTGAIFLKSNIELHV 60
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L S +L ++PV++ R + S I+G NL ++ +TG +GT+DG G
Sbjct: 61 SPGAILSFSTELADYPVVE-----SRWEGVQREVHASCIYGENLENISITG-SGTLDGNG 114
Query: 237 ALWWQQF--HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
WW++ H +L+Y RP L+ F + I + L NSPSW V+P+ N+ + ++I
Sbjct: 115 QPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSI 174
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
+ P SPNTDGINP+SC+N RI +C I GDDC+A+K+G ++ +P + + I T
Sbjct: 175 LNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCT 232
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
+ + A + LGSEMSG I++V + T+ G+R+K+ GRGG ++DI + + M
Sbjct: 233 MVHGHGA-VVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEE 291
Query: 415 MKWAFWMTGNY--GSHADNHY----DPKAL----PVIQGINYRDIVADNVSMAA-RLEGI 463
+ F + Y G + Y +P + P + I++ DI A V AA L G+
Sbjct: 292 VICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGL 351
Query: 464 SGDPFTGICIANATIGMA 481
+ I +N I MA
Sbjct: 352 AEQYIAEITFSNIDISMA 369
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 201/377 (53%), Gaps = 25/377 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G DG T T A + S+ GG ++VP+G +LTG+ L S+ L+L
Sbjct: 28 NIVDYGAPQDGTTLATGA---IAAAIEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHLS 84
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L S DL ++PV++ R + S I+G NL ++ VTG +GT+DG G
Sbjct: 85 PGAILSFSTDLVDYPVVE-----SRWEGVQREVHASCIYGQNLENISVTG-SGTLDGNGQ 138
Query: 238 LWWQQF--HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII 295
WW++ H +L+Y RP L+ F + I + L NSPSW V+P+ N+ + ++I+
Sbjct: 139 PWWEKHRKHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNVSIL 198
Query: 296 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC 355
P SPNTDGINP+SC+N RI +C I GDDC+A+K+G ++ +P + + I T
Sbjct: 199 NPTDSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 256
Query: 356 ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + A + LGSEMSG I++V + T+ G+R+K+ GRGG V+DI V + M +
Sbjct: 257 VHGHGA-VVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDV 315
Query: 416 KWAFWMTGNY--GSHADNHY----DPKAL----PVIQGINYRDIVADNVSMAA-RLEGIS 464
F + Y G + Y +P + P + I++ DI A V AA L G++
Sbjct: 316 ICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLA 375
Query: 465 GDPFTGICIANATIGMA 481
I +N I MA
Sbjct: 376 EQYIAEITFSNIDISMA 392
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 189/367 (51%), Gaps = 37/367 (10%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ DFG GDGKT +T + AI YS G +++ P G +LTG L S+ TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDA------------AAGRYTSLIFGTNLTDVI 224
KDA LL + D N +P+ LP+ + +++ AA + SLI G N+ +V
Sbjct: 140 SKDAVLLGANDRNLYPI---LPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVN 196
Query: 225 VTGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
+ G+ GTIDG WW++ HK K RP + NI I LT+ NSP+W +HP
Sbjct: 197 IIGE-GTIDGNANFETWWKE-HKIKKGAWRPRTVFLNQCKNILIEGLTIKNSPAWTIHPF 254
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
S N+ +TI P SPNTDG+NP++ N I C GDDC+A+KSG + G
Sbjct: 255 QSENLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLG 314
Query: 343 MPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
T+++ +R C Y + +GSEMSGG+++V E NT+ G+RIKT GRGG+
Sbjct: 315 KLTEKVFVR--NCYMEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGF 372
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVA 451
+ +I+ + M+ +K F + Y +D + K P I I +DI
Sbjct: 373 IDEIHADKIRMNRVKTPFTINSFYFCDSDGKTEYVWSKEKLPIDKRTPYIGNIYLKDIGC 432
Query: 452 DNVSMAA 458
N +AA
Sbjct: 433 TNTQVAA 439
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 196/377 (51%), Gaps = 25/377 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G V D S A ++ S GG + VPAG ++TG+ L SH L L
Sbjct: 5 NIVDYGAVKD---SGVPATAAIAAAITAASEAGGGTVVVPAGTFVTGAIFLKSHIELRLS 61
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L S + +++PV+K R + S I+G +L +V VTG +G I+G G
Sbjct: 62 PGAVLSFSTNPDDYPVVK-----SRWEGVQREVHASCIYGEDLENVTVTG-SGCINGNGQ 115
Query: 238 LWW--QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII 295
WW Q+ +L Y RP L+ F + I ++L++SPSW V+P+ N+ + ++I+
Sbjct: 116 PWWEKQRNRPEELHYPRPKLISFDRCRRVTIRDVSLVDSPSWTVNPIRCHNVTIDNVSIL 175
Query: 296 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC 355
P SPNTDGINP+SC+N RI +C+I GDDC+A+K+G +E A +P + + I T
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCHIDVGDDCIAIKAGTEE--TAERVPCENITITNCTM 233
Query: 356 ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
I + + +GSEMSG I++V + +T+ G+R+K+ GRGG V+DI V + M +
Sbjct: 234 IHGHGG-VVIGSEMSGNIRNVTISNCVFQHTDRGIRLKSRRGRGGIVEDIRVSNLVMENV 292
Query: 416 KWAFWMTGNY--GSHADNHY--DPKALPVIQG------INYRDIVADNVSMAA-RLEGIS 464
F M Y G Y D PV + I++ DI A V AA L G++
Sbjct: 293 ICPFIMNLYYFCGPRGKEKYVWDKNPYPVTEETPQFRRIHFSDITAREVHAAAGFLYGLA 352
Query: 465 GDPFTGICIANATIGMA 481
+ + I MA
Sbjct: 353 EQYISEVTFDQIEISMA 369
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 196/397 (49%), Gaps = 48/397 (12%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A ++AI + S+ +GG ++ PAG++LTG+ L S+ T++L A L S++ +++
Sbjct: 39 TQAIQNAIEKASK---NGGGTIFFPAGEYLTGALTLKSNITIHLDSGALLKFSENFDDF- 94
Query: 193 VIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL--- 248
LP R + L + ++ ++ +TG G IDGQG WW + ++ +
Sbjct: 95 ----LPYVEMRYEGIVMKSFQPLFYAKDVENIAITG-RGIIDGQGKAWWNEVYRIETAKE 149
Query: 249 ------------------------------KYTRPYLMEFMYTDNIQISSLTLLNSPSWN 278
K+ RP + NI I +T NSP W
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWT 209
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
++P + N+ V GI+I P SPNTDGINP SCTN I DC+I GDDC+ +KSG D G
Sbjct: 210 INPEFCDNVRVTGISIFNP-HSPNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDG 268
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
YG T+ + I T +S + + +GSEMSGGI+ + + T+ G+RIK+A GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHGG-VVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 399 GGYVKDIYVRGMTMHTMK-WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMA 457
GG V+DI V + M +K A ++ Y + P+ + I+ +I A NV+ A
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTTVEPVTEKTPIFRNIHMSNITASNVNKA 387
Query: 458 ARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
++ GI+ P I +N I M K T D+
Sbjct: 388 GQILGITEMPIQNITFSN--INMDGKEGFTVSTTTDV 422
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/103 (86%), Positives = 97/103 (94%)
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
++TRPYL+E M++DNIQIS+LTLLNSPSWNVHPVYSSNI+VQGITI APVTSPNTDGINP
Sbjct: 97 RHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINP 156
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
DSCTN RIEDCYIVSGDDCVAVKSGWDEYGI +G PTKQLVI
Sbjct: 157 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 196/397 (49%), Gaps = 48/397 (12%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A ++AI + S+ +GG ++ PAG++LTG+ L S+ T++L A L S++ +++
Sbjct: 39 TQAIQNAIEKASK---NGGGTIFFPAGEYLTGALTLRSNITIHLDSGALLKFSENFDDF- 94
Query: 193 VIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL--- 248
LP R + L + ++ ++ +TG G IDGQG WW + ++ +
Sbjct: 95 ----LPYVEMRYEGIVMKSFQPLFYAKDVQNITITG-RGVIDGQGKAWWNEVYRIETAKE 149
Query: 249 ------------------------------KYTRPYLMEFMYTDNIQISSLTLLNSPSWN 278
K+ RP + NI I +T NSP W
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWT 209
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
++P + N+ V GI+I P SPNTDGINP SCTN I +C+I GDDC+ +KSG D G
Sbjct: 210 INPEFCDNVTVTGISIFNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDG 268
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
YG T+ + I T +S + + +GSEMSGGI+ + + T+ G+RIK+A GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHGG-VVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 399 GGYVKDIYVRGMTMHTMK-WAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMA 457
GG V+DI V + M +K A ++ Y + P+ + I+ +I A NV+ A
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTQVEPVTEKTPIFRNIHMSNITASNVNKA 387
Query: 458 ARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
++ GI+ P I +N I M K T D+
Sbjct: 388 GQILGITEMPIQNITFSN--INMDGKEGFTVSTATDV 422
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 116/165 (70%)
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
+ DV ++ INT+S +RIKTA+GRGGY+KDI+ R TM TMK+ FWMTG+Y H
Sbjct: 947 LTDVVITEVTLINTQSAIRIKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGG 1006
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
+DPKALP I I+YRD+ A+NV+++A+LE I PFTG+C+++ TI ++ KK+ W C
Sbjct: 1007 FDPKALPEISNIHYRDMTAENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQWNCT 1066
Query: 493 DIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEMKKC 537
D+ G+TS VTP PC LLPD+ CDFPT+ +PI+ V + KC
Sbjct: 1067 DVSGVTSRVTPEPCSLLPDKRTTMDSDCDFPTDKIPIESVVLNKC 1111
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 125/191 (65%), Gaps = 12/191 (6%)
Query: 53 QHSKITYLITTMELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRL-----DSFEY 107
QHS+ + + + SR + +L+V+A+ ESR L S EY
Sbjct: 781 QHSEKIAVAFGLISTSKSRPLKMIQTSFKILVVLAISGFPMMESRIQSNLGSTSNKSIEY 840
Query: 108 NAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFN 167
A++CR HSA +T+FG +GDGK SNTKAF++AI++L+ ++DGG QL VP G WLTGSFN
Sbjct: 841 LALNCRKHSAVLTNFGAIGDGKPSNTKAFREAISKLTPLAADGGVQLIVPPGSWLTGSFN 900
Query: 168 LISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
L SHFTL++ + A +LASQD +E+P+I PLPSYG DA R+T L++G+NLTDV++T
Sbjct: 901 LTSHFTLFIQQGATILASQDESEYPMIPPLPSYG---DA---RFTGLVYGSNLTDVVIT- 953
Query: 228 DNGTIDGQGAL 238
+ I+ Q A+
Sbjct: 954 EVTLINTQSAI 964
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 186/387 (48%), Gaps = 38/387 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ DFG VG G +T A + A+++ + G + VP+GK+LTG + SH TL L
Sbjct: 10 VRDFGAVGTGDERDTAALQSALDECAGT----GGTVVVPSGKYLTGPLTVGSHTTLELEA 65
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A L +D +P + S G + + + +V +TG GT+DGQG
Sbjct: 66 GATLSFVRDHEAFPARE---SRWEGWEQTG--FHPCLLVAEAENVEITG-RGTVDGQGDY 119
Query: 239 WWQ------------------QFHKGKLKYT-------RPYLMEFMYTDNIQISSLTLLN 273
WWQ FH+ K RP L + + N+ +S +TL N
Sbjct: 120 WWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNVSVSGITLRN 179
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SP WN H VYS N+ + + + P +PN DGI+ DS RI DCY+ +GDD V +KSG
Sbjct: 180 SPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGDDAVCIKSG 239
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
DE G G P + + T + + + +GSEMSG ++DV + +T+ G+RIK
Sbjct: 240 KDEEGRRIGRPASGITVTNCTVEAGHGG-VVIGSEMSGDVRDVTVSNCTFTDTDRGIRIK 298
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVA 451
T GRGG V+D + M + F + G Y D+ P ++ P+++ I Y DI+A
Sbjct: 299 TQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDIDSDPIPVDESTPMVRNIAYSDIIA 358
Query: 452 DNVSMAARLEGISGDPFTGICIANATI 478
+V A G+ F I +N I
Sbjct: 359 RDVETAGFFAGLPEQRFENISFSNVEI 385
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 199/395 (50%), Gaps = 40/395 (10%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ FG GDGK +T A + + GG + V G++LTG+ L S+ TL +
Sbjct: 24 VKTFGAAGDGKKKDTAA---IARAIDAAAKAGGGTVVVSPGRYLTGALTLKSNVTLDVEA 80
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A LL S D ++P+ + + +G ++ Y+SLI+ + + G GTIDGQG
Sbjct: 81 GATLLGSPDPEDYPLRENV--WGEKKE-----YSSLIYADGAVHITIRG-RGTIDGQGQA 132
Query: 239 WWQQF-------------------HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
WW++ KL+Y RP++++ + + ++ I L L+NS SW V
Sbjct: 133 WWKRMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSASWTV 192
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
+P+ + + GITI PV SPNTDGINP+SC N +I + I GDDCV +KSG DE G
Sbjct: 193 NPLLCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKDEAGR 252
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G P + + I + + A + +GSEMSGG+++V + T+ G+R+K+ GRG
Sbjct: 253 RVGRPDENITITNCVMLKGHGA-VTIGSEMSGGVRNVVVSNCVFQGTDVGIRVKSQRGRG 311
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNY-GSHADNHYDP--KALPVIQGINYRDIVADNVSM 456
G V+ V + M + AF +T Y G+ P + P ++ + +I A
Sbjct: 312 GIVEGFVVSNVVMQDVASAFTLTSFYAGTDKPGDLFPVGEGTPRLRDFRFSNITARGSKT 371
Query: 457 AARLEGISGDP-----FTGICIANATIGMAAKHKK 486
A ++ G+ P FTG+ I A GM + K
Sbjct: 372 AGQITGLKEMPIENITFTGVRI-QAETGMKITNAK 405
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 176/329 (53%), Gaps = 27/329 (8%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
++ DFG GDGKT +T + AI YS G +++ P G +LTG L S+ TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDA------------AAGRYTSLIFGTNLTDVI 224
KDA LL + D N +P+ LP+ + +++ AA + SLI G N+ +V
Sbjct: 140 SKDAVLLGANDRNLYPI---LPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVN 196
Query: 225 VTGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
+ G+ GTIDG WW++ HK K RP + NI I +T+ NSP+W +HP
Sbjct: 197 IIGE-GTIDGNANFETWWKE-HKIKKGAWRPRTVFLNQCKNILIEGVTIKNSPAWTIHPF 254
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
S N+ +TI P SPNTDG+NP++ N I C GDDC+A+K+G + G
Sbjct: 255 QSENLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLG 314
Query: 343 MPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
T+++ +R C Y + +GSEMSGG+++V E NT+ G+RIKT GRGG+
Sbjct: 315 KLTEKVFVR--NCYMEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGF 372
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
+ +I+ + M+ +K F + Y D
Sbjct: 373 IDEIHADKIRMNRVKTPFTINSFYFCDVD 401
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
Query: 307 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALG 366
+PDS TN I CY+ +G D + +KSGWDEYGI++ P+ + I +T + + IA G
Sbjct: 9 HPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFG 68
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYG 426
SEMSGGI +VRA ++ +N+ G+RIKTA GRGGYV+++Y+ ++M + A +TGNYG
Sbjct: 69 SEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYG 128
Query: 427 SHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKK 486
H D+ YD ALPVI I +D+V N+ +A LEGI GD F+ IC++N ++ + + H
Sbjct: 129 EHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAH-- 186
Query: 487 VPWTCADIGGMTSGVTPPPCELL 509
PW C+ I G ++ V P CE L
Sbjct: 187 -PWNCSLIEGYSNSVIPESCEQL 208
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 197/413 (47%), Gaps = 52/413 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G DGKT NTK I++L+ ++GG L+ PAG +LTGS + SH
Sbjct: 22 RAERVDMLKAGAKVDGKTLNTKLINSTIDRLN---ANGGGTLFFPAGTYLTGSIRMKSHI 78
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 79 TLELEAGATLLFSDSFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 132
Query: 232 IDGQGALWWQQFHK--------------------------------------GKL--KYT 251
+DGQG WW +F + G L ++
Sbjct: 133 LDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTAIYAETNKDYIGTLQRRFF 192
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
RP ++ + +++I + ++NSP W V+P + N+ V+G+TI V SPNTDGINP+SC
Sbjct: 193 RPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTI-HNVPSPNTDGINPESC 251
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
N I DC+I GDDC+ +KSG D G G+P + + I +S + + +GSEMSG
Sbjct: 252 RNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSGHGG-VVIGSEMSG 310
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN 431
G++ V + T+ G+R+K+ GRGG V+DI V + M +K + S
Sbjct: 311 GVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYSGMPA 370
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKH 484
+ P+ + I+ + +V ++ G+ P + I + + + A +
Sbjct: 371 EPKSERTPLFRNIHISGMTVTDVKTPVKIVGLEEAPISEIVLRDIHVQGAGEE 423
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 136/219 (62%), Gaps = 17/219 (7%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+E +K F S I++F VG S F + L + S+ +
Sbjct: 988 SEEQKCYSFPCFLSLPPSPLLLRTVISNFDLVGAAAESGDDEFTAKLRYLFELSA---TE 1044
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
V GKW F L TL H + + + L SYGRGRDA GR++S
Sbjct: 1045 TDVAFGKW----FGLRYIDTLLDHSKSM---------FQTLLLLYSYGRGRDAPDGRFSS 1091
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLN 273
LIFGTNLTDVI+TG NGTIDGQG WW +FHKG+LK TRPY++E M++D+IQIS+LTL+N
Sbjct: 1092 LIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMIEIMFSDHIQISNLTLIN 1151
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP-DSC 311
SPSW VHP+Y+S+I++QG+TI+APV SPNTDGI+P DSC
Sbjct: 1152 SPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPGDSC 1190
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Query: 105 FEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ-LYVPAGKWLT 163
F A R AS+ +FG VGDG T NT AF+ A+ +L + GG L VP G+WLT
Sbjct: 76 FYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLT 135
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
GSFNL S FTL+LH+ A +L SQD EWP+I PLPSYGRGR+ R+ SLI G L DV
Sbjct: 136 GSFNLTSRFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDV 195
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
++TG NGTIDGQG +WW+ + L +TR +L+E + + N+ ISS+TL NSP W VHPVY
Sbjct: 196 VITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVY 255
Query: 284 SSNIL 288
++L
Sbjct: 256 CRSVL 260
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 117/153 (76%)
Query: 83 LIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ 142
+I++AL+S E ++ + + AI+CR H+A +TDFGGVGDG TSNT+AF+ AI
Sbjct: 20 VILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAIEH 79
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGR 202
LS +++GGAQL VP GKWLTGSFNL SHFTL++HKDA +LASQD +EWP + LPSYG
Sbjct: 80 LSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPSYGV 139
Query: 203 GRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
GRDA GRY+SLI+GTNLTDV++TG+NG Q
Sbjct: 140 GRDAPGGRYSSLIYGTNLTDVVITGNNGCKSSQ 172
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 200/382 (52%), Gaps = 25/382 (6%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ + +I D+G DGKT T+A +A + S+ GG + +P+G +LTG+ S+
Sbjct: 51 KMQAYNIVDYGAPQDGKTPATEAIANA---IEAASNAGGGTVVIPSGTYLTGAIFFKSNI 107
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L A L S + ++PV++ R + S I+G NL ++ VTG +G +
Sbjct: 108 ELHLSPGAILSFSTNPADYPVVE-----SRWEGVQREVHASCIYGQNLENISVTG-SGIL 161
Query: 233 DGQGALWWQQF--HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
+G G WW++ H +L+Y RP L+ F + I + L NSPSW ++P+ N+ +
Sbjct: 162 EGNGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTID 221
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
++I+ P SPNTDGINP+SC+N RI +C I GDDC+A+K+G ++ + + + I
Sbjct: 222 NLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIACENITI 279
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
T + + + LGSEMSG I++V + T+ G+R+K+ GRGG ++DI V +
Sbjct: 280 TNCTMVHGHGG-VVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNI 338
Query: 411 TMHTMKWAFWMTGNY--GSHADNHY--DPKALPV------IQGINYRDIVADNVSMAA-R 459
M + F + Y G + Y D PV + I++ DI A V AA
Sbjct: 339 VMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPCFRRIHFADITARQVHAAAGF 398
Query: 460 LEGISGDPFTGICIANATIGMA 481
L G++ I +N I MA
Sbjct: 399 LYGLAEQYIAEITFSNIDISMA 420
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 181/347 (52%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ ++ L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKNIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTSAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF--HKGKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 200/427 (46%), Gaps = 53/427 (12%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
AI+ +A + G DGKT NT +++LSQ GG L+ PAG +LTG+ L
Sbjct: 17 AITLKAERVDMLKSGAKADGKTLNTTLINHTVDRLSQA---GGGTLFFPAGTYLTGAIRL 73
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTG 227
S+ TL L A LL S + +++ LP R ++ LI + ++ + G
Sbjct: 74 KSNITLELEAGATLLFSDNFDDY-----LPFMEVRHEGVMMKSFSPLISAMDAENITIKG 128
Query: 228 DNGTIDGQGALWWQQFHK--------------------------------------GKLK 249
+ GT+DGQG WW +F + G LK
Sbjct: 129 E-GTLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVEALYAETNEDWHGTLK 187
Query: 250 --YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGIN 307
+ RP ++ + ++I + ++NSP W V+P + N++V G+T I V SPNTDGIN
Sbjct: 188 RRFFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVT-IHNVPSPNTDGIN 246
Query: 308 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGS 367
P+SC N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GS
Sbjct: 247 PESCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGS 305
Query: 368 EMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGS 427
EMSG ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 306 EMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYS 365
Query: 428 HADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKV 487
+ P+ + I+ + A V ++ G+ P T I + + + A+ K +
Sbjct: 366 EMPVEPMSERTPLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINV-KNAREKCI 424
Query: 488 PWTCADI 494
C I
Sbjct: 425 FENCERI 431
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 194/393 (49%), Gaps = 43/393 (10%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I D G G NT+A +AI ++ GG + VP G WLTG+ + S L+L
Sbjct: 22 IRDHGARPGGALLNTRAIAEAIQACAR---QGGGHVVVPPGIWLTGAIHFRSRIDLHLEA 78
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAA-GRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L SQ+ +++ LP+ R Y+ ++ D+ +TG G ++GQG
Sbjct: 79 GAELRFSQNPDDY-----LPAVLSQRGGVMIYNYSPFLYAHRCEDISITG-AGLLNGQGQ 132
Query: 238 LWWQQFH--------KGKLKY------------------TRPYLMEFMYTDNIQISSLTL 271
WW H +G + RP + + + I +T
Sbjct: 133 SWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLIEGVTF 192
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAP--VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
+SPSW + PV+ S+++++ TI+ P + S NTDGI+PD+C N IE C + +GDD +
Sbjct: 193 RDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEHCVVDTGDDAIC 252
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+K+G DE G+P++ ++IR S + I +GSEMS G++++ A D T++
Sbjct: 253 IKAGRDEDAWEAGIPSENILIRHCEIRSGHGG-ITIGSEMSAGVRNLHAHDCTCDGTDTA 311
Query: 390 VRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKAL---PVIQGIN 445
+RIKT GRGG++KDI + +T ++ A +T +YG + DPK L P ++ I
Sbjct: 312 IRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPAVENIL 371
Query: 446 YRDIVADNVSMAARLEGISGDPFTGICIANATI 478
R++ D+ A L G+ G P + + N I
Sbjct: 372 IRNVRCDSAREALHLRGLPGHPLKNVTLQNLEI 404
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 200/424 (47%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDTENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + +N+ ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 426
Query: 491 CADI 494
C I
Sbjct: 427 CERI 430
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 168/327 (51%), Gaps = 41/327 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ +FG DG +N AF +A++ L + GG L VPAG W TG L + TL+L
Sbjct: 5 NLKNFGAKADGIYNNAAAFAEAVSVLHEA---GGGTLTVPAGIWKTGPIRLCAKMTLHLA 61
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L D +P P Y R + ++ + V VTG G IDG G
Sbjct: 62 EGAVLRFIPDPELYP-----PVYTRWEGVECYAMQACLYCADSDSVTVTG-KGVIDGSGD 115
Query: 238 LWW----QQFHKG---------------------------KLKYTRPYLMEFMYTDNIQI 266
WW Q+ +G ++++ RP L++F N+++
Sbjct: 116 TWWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTNVRL 175
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+TL NSP W VHPVY N+LV+GITI P +PNTDGI+ DSCTN +I DC + GDD
Sbjct: 176 EQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVGDD 235
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
+A+KSG E GI PT+ + +R T + + +GSE + GI+ V AE+ + T
Sbjct: 236 GIALKSGSGEDGIRVNRPTRNVTVRGCTVRDAHGGMV-IGSETAAGIRHVLAENCRFPGT 294
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMH 413
+ GVRIK+ GRGG + D+ +R + M
Sbjct: 295 DRGVRIKSRRGRGGEIYDVKLRNLVME 321
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 199/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 29 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 85
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 86 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 139
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 140 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 199
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 200 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 257
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 258 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 316
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 317 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 376
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 377 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 435
Query: 491 CADI 494
C I
Sbjct: 436 CERI 439
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 199/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 426
Query: 491 CADI 494
C I
Sbjct: 427 CERI 430
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 199/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 426
Query: 491 CADI 494
C I
Sbjct: 427 CERI 430
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 199/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 30 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 86
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 87 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 140
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 141 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFF 200
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 201 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 258
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 259 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 317
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 318 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 377
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 378 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 436
Query: 491 CADI 494
C I
Sbjct: 437 CERI 440
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 199/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 426
Query: 491 CADI 494
C I
Sbjct: 427 CERI 430
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 203/427 (47%), Gaps = 61/427 (14%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHA 429
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K A + Y
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 430 DNHYDPKA--LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKV 487
+PK+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 368 ---VEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QEGKQKCI 423
Query: 488 PWTCADI 494
C I
Sbjct: 424 FENCERI 430
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 190/384 (49%), Gaps = 52/384 (13%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
+IT+FG GD T NT++ AI + + GG LY+PAG +LTG +LIS+ T+Y+
Sbjct: 3 CNITEFGAKGDSNTDNTESISSAIKRCAD---SGGGTLYIPAGTYLTGPISLISNLTIYI 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L+ D + +P P+ + G + ++ L++G LT+V + G +G IDGQG
Sbjct: 60 ESGAKLVFIDDFSAYP---PVKTRWSGYECYG--FSPLLYGNGLTNVSIIG-SGCIDGQG 113
Query: 237 ALWWQQFH---KGKL-----------------------------KYTRPYLMEFMYTDNI 264
WW+ H KG+ ++ RP L++ D++
Sbjct: 114 EAWWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSV 173
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
+ +TL NSP WN H VY N+ + + P +PN DG++ DSC+N R+ +C+ G
Sbjct: 174 TLDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVG 233
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI 384
DDC+A KSG +E G PT+ + + T + + I +GSE SGGI+++ + I
Sbjct: 234 DDCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHGG-IVMGSENSGGIRNIAVSNCVFI 292
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD------NHYDP--- 435
T+ G+R+KT RG Y++DI + + M + + Y D N P
Sbjct: 293 GTDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAINSFYRHGLDKSDSLINELSPIEI 352
Query: 436 -KALPVIQGINYRDIVADNVSMAA 458
+ P I+ I+ ++ A N AA
Sbjct: 353 SEKTPEIEYIHISNVTARNCRSAA 376
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 203/427 (47%), Gaps = 61/427 (14%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 29 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 85
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 86 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 139
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 140 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 199
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 200 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 257
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 258 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 316
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHA 429
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K A + Y
Sbjct: 317 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 376
Query: 430 DNHYDPKA--LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKV 487
+PK+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 377 ---VEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QEGKQKCI 432
Query: 488 PWTCADI 494
C I
Sbjct: 433 FENCERI 439
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 198/423 (46%), Gaps = 53/423 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GK NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
RP ++ + ++I + ++NSP W V+P + N+ ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESC 249
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMSG 308
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN 431
++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPA 368
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTC 491
+ P+ + ++ + +V ++ G+ P + I + + I A+ K + C
Sbjct: 369 EAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI-QGARQKCIFEDC 427
Query: 492 ADI 494
I
Sbjct: 428 ERI 430
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 192/406 (47%), Gaps = 54/406 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
IT +G GDG NT A AI S + GG +YVPAG ++TG L SH TL L
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+ L + + +P P R Y+ LI+G L V + G+ G I+GQG
Sbjct: 63 GSVLRFTPRFDAYP-----PVQTRWSGYEMWGYSPLIYGNGLKQVAIKGE-GVIEGQGQA 116
Query: 239 WWQQF-------------HKGKL--------------------KYTRPYLMEFMYTDNIQ 265
WW + H KL ++ RP L++ M+ + +
Sbjct: 117 WWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ +TL NSP WN H VY ++ ++G+ P T+PN DG++ DSC+N RI DC+ GD
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+ +KSG DE G G PT+ + + T + + + LGSE +GGI++V + I
Sbjct: 237 DCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVV-LGSETAGGIRNVTISNCIFIG 295
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPVI 441
T+ G+RIKT RGG V+++ + + M + + Y D P+A+PV
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVT 355
Query: 442 QG------INYRDIVADNVSMAAR-LEGISGDPFTGICIANATIGM 480
+G I D+ A N AA + G+ P + + + T M
Sbjct: 356 EGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEM 401
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 176/349 (50%), Gaps = 46/349 (13%)
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKG 246
D WP++ LPSYG GR+ R+ SLI G NL DV++T I AL Q
Sbjct: 7 DEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITAFEYIIHVLNALALYQ---- 62
Query: 247 KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGI 306
L P ++HP + NIL I +A VT
Sbjct: 63 ------------------------TLEVPV-DIHPFFY-NIL--SILTLALVT------- 87
Query: 307 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALG 366
DSC + IE+CYI GDD +A+KSGWD+YGIAYG P+ ++IR +T S SA I++G
Sbjct: 88 --DSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIG 145
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYG 426
SEMSGG+ +V E+++ + GVRIKTA GRGGY+++I R +T ++ + +Y
Sbjct: 146 SEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYN 205
Query: 427 SHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKK 486
HAD+ YD A P I I+++ I V + R G P I + ++G++ K K
Sbjct: 206 EHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKH 265
Query: 487 VPWTCADIGG-MTSGVTPPPCELL---PDQGPEKIRACDFPTESLPIDM 531
+ + C+ + G + V P PCE L +QG RA + L D+
Sbjct: 266 I-FQCSYLEGRVIRPVFPKPCENLDVYDEQGQLVKRAVALNSTELDYDI 313
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 199/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGIYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QEGKQKCIFEN 426
Query: 491 CADI 494
C I
Sbjct: 427 CERI 430
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 195/392 (49%), Gaps = 41/392 (10%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I D G G NT+A DAI ++ GG ++ VP+G WLTG+ + S L+L
Sbjct: 22 IRDHGAHPGGALLNTRAIADAIQACAR---QGGGRVVVPSGIWLTGAIHFRSRIDLHLEA 78
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A L SQ+ +++ + P+ S G Y+ ++ D+ +TG G ++GQG
Sbjct: 79 GAELRFSQNPDDY--LPPVLSQRGG--VMIYNYSPFLYAHRCEDISITG-AGLLNGQGQS 133
Query: 239 WWQQFH--------KGKLKY------------------TRPYLMEFMYTDNIQISSLTLL 272
WW H +G + RP + + + I +T
Sbjct: 134 WWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLIEGVTFR 193
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVT--SPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+SPSW + PV+ +++ ++ TI+ P + S NTDGI+PD+C N IE C + +GDD + +
Sbjct: 194 DSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPDACRNVLIEHCVVDTGDDAICI 253
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
K+G DE G+P + ++IR S + I +GSEMS G++++ A D T++ +
Sbjct: 254 KAGRDEDAWEAGIPCENILIRHCEIRSGHGG-ITIGSEMSAGVRNLHAHDCTCDGTDTAI 312
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKAL---PVIQGINY 446
RIKT GRGG++KDI + +T ++ A +T +YG + DPK L P ++ I
Sbjct: 313 RIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPAVENILI 372
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATI 478
R++ D+ A L G+ G P + + N I
Sbjct: 373 RNVRCDSAREALHLRGLPGHPLKNVTLQNLEI 404
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 187/363 (51%), Gaps = 25/363 (6%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+A + AI+ + S GG + VPAG++LTG+ L S+ L+L A L S D ++
Sbjct: 15 NTEAIQKAIDAAA---SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDY 71
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLK 249
P++ + R Y S I+ N+ ++ VTG GT+DG G WW F L
Sbjct: 72 PIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLA 125
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
Y RP LM F I + + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+
Sbjct: 126 YPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPE 185
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
SC N RI +C+I GDDC+A+K+G ++ + + + I T + + + LGSEM
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEM 242
Query: 370 SGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GS 427
SG I+++ + T+ G+R+K+ GRGG V+DI V + M + F + Y G
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 428 HADNHY--DPKALPV------IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATI 478
Y + A P+ + I++ +I A NV + A + G++ I N +
Sbjct: 303 RGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
Query: 479 GMA 481
MA
Sbjct: 363 SMA 365
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 197/423 (46%), Gaps = 53/423 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GK NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
RP ++ + ++I + ++NSP W V+P + N+ ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESC 249
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMSG 308
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN 431
++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPA 368
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTC 491
+ P+ + ++ + +V ++ G+ P I + + I A+ K + C
Sbjct: 369 EAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPIFDIVLRDIHI-QGARQKCIFEDC 427
Query: 492 ADI 494
I
Sbjct: 428 ERI 430
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 179/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYAFCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 198/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G + V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 308 GSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + NV ++ G+ P + I + + I K K +
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 426
Query: 491 CADI 494
C I
Sbjct: 427 CERI 430
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 199/424 (46%), Gaps = 55/424 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GK NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKTGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVTTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDS 310
RP ++ + ++I + ++NSP W V+P + N++++GITI AP SPNTDG+NP+S
Sbjct: 191 RPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGITIDNAP--SPNTDGVNPES 248
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMS 307
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
G ++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWT 490
+ P+ + ++ + +V ++ G+ P + I + + I K K +
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEN 426
Query: 491 CADI 494
C I
Sbjct: 427 CERI 430
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 179/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 193/398 (48%), Gaps = 50/398 (12%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A + AI + S+ +GG ++ PAG++LTG+ L S+ T++L A L S++ +++
Sbjct: 41 TEAIQGAIEKASK---NGGGTIFFPAGEYLTGALKLKSNITIHLDSGALLKFSENFDDY- 96
Query: 193 VIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH-----KG 246
LP R ++ L + ++ ++ + G G IDGQG WW + + KG
Sbjct: 97 ----LPYVEMRYEGIVMQSFSPLFYAKDVENITIKG-RGVIDGQGKAWWNEVYRIETAKG 151
Query: 247 KLKYT----------------------------RPYLMEFMYTDNIQISSLTLLNSPSWN 278
+ T RP + NI I +T NSP W
Sbjct: 152 PIPETKYQKMWTEQNKGIVYEPYYKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWT 211
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
++P + N+ V GITI P SPNTDGINP SCTN I +C+I GDDC+ +KSG D G
Sbjct: 212 INPEFCDNVTVTGITINNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADG 270
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
YG T+ + I T +S + + +GSEMSGGI+ + + T+ G+RIK A GR
Sbjct: 271 RKYGKATENVTITNCTMLSGHGG-VVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARGR 329
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSM 456
GG V+DI V + M +K + + DN +P + P+ + I+ ++ NV+
Sbjct: 330 GGVVEDIRVDNIVMKNIKEEAIILDLF-YDKDNPVEPVTERTPIFRNIHISNVTGGNVNK 388
Query: 457 AARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
A + GI P I +N I M K T D+
Sbjct: 389 AGFVRGIVEMPIQNITFSN--INMDGKEGFTINTATDV 424
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 197/423 (46%), Gaps = 53/423 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GK NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVSTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
RP ++ + I+I + ++NSP W V+P + N+ ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGINPESC 249
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMSG 308
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN 431
++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 309 SVRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREAVVLNLKYSKMPA 368
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTC 491
+ P+ + ++ + +V ++ G+ P + I + + I K K + C
Sbjct: 369 EPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFENC 427
Query: 492 ADI 494
I
Sbjct: 428 ERI 430
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 179/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + KA P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 185/390 (47%), Gaps = 40/390 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG D T A K+AI + SQ GG +Y P G +LTG +L S+ TL++
Sbjct: 24 NVLDFGAKNDSSALATTAIKEAIAKASQA---GGGTIYFPPGTYLTGPIHLKSNITLFIE 80
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L S + + + + P R ++ I+ ++ +TG GT++G G
Sbjct: 81 AGAELCFSDNFDHYLPMVP----SRWEGTMVTNFSPFIYAYEAENIRITG-RGTLNGNGK 135
Query: 238 LWW----------------QQFHK-------------GKLKYTRPYLMEFMYTDNIQISS 268
WW ++FHK + + RP ++ MY N++I
Sbjct: 136 KWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFLRPPFIQPMYCKNVRIDG 195
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+T+ NSP W V+P + N+ + G+TI P SPNTDGINP+SC+N I +C+I GDDC+
Sbjct: 196 ITIKNSPFWTVNPEFCDNVTIDGVTINNP-PSPNTDGINPESCSNVHISNCHISVGDDCI 254
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTES 388
+KSG D G P + I T +S + + +GSEMSG ++ + + T+
Sbjct: 255 TIKSGKDRSGRKEARPAENYTITNCTMLSGHGG-VVIGSEMSGDVKKIVISNCIFDGTDR 313
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRD 448
G+RIKTA GRGG V+DI V + M +K + + D + P I+ +
Sbjct: 314 GIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKTDREPVSERTPRFSNIHLSN 373
Query: 449 IVADNVSMAARLEGISGDPFTGICIANATI 478
I A A L G+ P + +N +
Sbjct: 374 ITAQG-EQAGYLNGLEEMPIENVSFSNMVM 402
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 196/422 (46%), Gaps = 53/422 (12%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A + G +GK NTK I++L++ +GG L+ PAG +LTGS L S+ T
Sbjct: 14 AERVDMLKIGAKANGKVLNTKLINTTIDRLNR---NGGGTLFFPAGTYLTGSIRLKSNIT 70
Query: 174 LYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L L A LL S + +++ P ++ R + LI+ + ++ + G+ GT+
Sbjct: 71 LELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GTL 124
Query: 233 DGQGALWWQQFHKGKL----------------------------------------KYTR 252
DGQG WW +F + + ++ R
Sbjct: 125 DGQGKKWWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTETNKDYVSTLQRRFFR 184
Query: 253 PYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCT 312
P ++ + ++I + ++NSP W V+P + N+ ++GIT I V SPNTDGINP+SC
Sbjct: 185 PPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGIT-IDNVPSPNTDGINPESCR 243
Query: 313 NTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG 372
N I DC+I GDDC+ +KSG D G+P + + I T +S + + +GSEMSG
Sbjct: 244 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMSGS 302
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
++ V + TE G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 303 VRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSPMPAE 362
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
+ P+ + ++ + +V ++ G+ P + I + + I K K + C
Sbjct: 363 PKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFEDCE 421
Query: 493 DI 494
I
Sbjct: 422 RI 423
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 192/362 (53%), Gaps = 25/362 (6%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+ + AI++ Q +GG ++ +PAG++LTG L + L+L A L S ++P
Sbjct: 18 TEGIQKAIDEAYQ---NGGGKVVIPAGEFLTGPLFLKDNIELHLENGAHLKFSDKQEDYP 74
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH--KGKLKY 250
V+ R Y S +F ++ VTG GTIDG G WW F + +LKY
Sbjct: 75 VVT-----SRWEGVKRKVYASCLFAEGARNIAVTG-FGTIDGNGMEWWDVFRNRREELKY 128
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
RP L+ F + ++I + + L+NSPSW V+P+ +I V ++I+ P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDPES 188
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N RI +C+I GDDC+A+KSG ++ + + + I T + + A + GSEMS
Sbjct: 189 CRNVRISNCHIDVGDDCIAIKSGTED--TEERVACENITITNCTMVHGHGAVV-FGSEMS 245
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSH 428
G I++V + +T+ G+R K+ GRGG V+D+ V + M + F + Y G
Sbjct: 246 GDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLYYFCGPR 305
Query: 429 ADNHY----DPKAL----PVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIG 479
+ Y +P + P+ + +++ +I A NV + A + G++ T I + I
Sbjct: 306 GKDQYVWDKNPYPVTAETPMFRRLHFANITARNVHASAGYIYGLAEQYATDITFSQIDIS 365
Query: 480 MA 481
+A
Sbjct: 366 LA 367
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 196/414 (47%), Gaps = 55/414 (13%)
Query: 123 GGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL 182
G +GKT NTK I++L++ GG L+ PAG +LTGS +L S+ TL L A L
Sbjct: 5 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 61
Query: 183 LASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
L S + +++ P ++ R + LI+ + ++ + G+ GT+DGQG WW
Sbjct: 62 LFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GTLDGQGKKWWM 115
Query: 242 QFHKGKL----------------------------------------KYTRPYLMEFMYT 261
+F + + ++ RP ++ +
Sbjct: 116 EFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRC 175
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITII-APVTSPNTDGINPDSCTNTRIEDCY 320
++I + ++NSP W V+P + N+ ++GITI AP SPNTDG+NP+SC N I DC+
Sbjct: 176 KKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESCRNVHISDCH 233
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
I GDDC+ +KSG D G+P + + I T +S + + +GSEMSG ++ V +
Sbjct: 234 ISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEMSGSVRKVTISN 292
Query: 381 IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPV 440
T+ G+RIK+ GRGG V+DI V + M +K + S + P+
Sbjct: 293 CVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERTPI 352
Query: 441 IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
+ ++ + NV ++ G+ P + I + + I K K + C I
Sbjct: 353 FRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI-QGGKQKCIFENCERI 405
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 196/377 (51%), Gaps = 25/377 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G DG T T+A +A + S+ GG + +P+G + TG+ L S+ L++
Sbjct: 5 NIVDYGAPQDGTTPATEAIANA---IEAASNAGGGTVVIPSGTYFTGAIFLKSNIELHVS 61
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L S + ++PV++ R + S I+G NL ++ VTG +G ++G G
Sbjct: 62 PGAILSFSTNPADYPVVE-----SRWEGVQREVHASCIYGQNLENISVTG-SGILEGNGQ 115
Query: 238 LWWQQF--HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITII 295
WW++ H L+Y RP L+ F + I + L NSPSW V+P+ N+ + ++I+
Sbjct: 116 PWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 296 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC 355
P SPNTDGINP+SC+N RI +C I GDDC+A+K+G ++ + + + I T
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIACENITITNCTM 233
Query: 356 ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + + LGSEMSG I++V + T+ G+R+K+ GRGG ++DI V + M +
Sbjct: 234 VHGHGG-VVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEV 292
Query: 416 KWAFWMTGNY--GSHADNHY--DPKALPV------IQGINYRDIVADNVSMAA-RLEGIS 464
F + Y G + Y D PV + I++ DI A V AA L G++
Sbjct: 293 ICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPSFRRIHFSDITARQVHAAAGFLYGLA 352
Query: 465 GDPFTGICIANATIGMA 481
I +N I MA
Sbjct: 353 EQYIAEITFSNIDISMA 369
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 137/201 (68%), Gaps = 1/201 (0%)
Query: 112 CRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISH 171
R S ++TDFG VGDG T NT+AF+ A+ +S+ S GG QL VP G+WLT FNL S
Sbjct: 78 LRPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAPFNLTSF 137
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL+L +DA +LA QD WP++ PLPSYG GR+ RY S I G NL DV+VTG+NG+
Sbjct: 138 MTLFLAEDAEILAVQDETLWPLLPPLPSYGYGREHYGPRYGSFIHGQNLKDVVVTGNNGS 197
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
++GQG WW+++ L +TR L++ M++ + +++TL +SP W +HP N+ +
Sbjct: 198 VNGQGVYWWKKYRSKLLNHTRGPLVQIMWSSDAVFANITLRDSPFWTLHPYDCKNVTITN 257
Query: 292 ITIIAPV-TSPNTDGINPDSC 311
+TI+APV +PNTDGI+PDSC
Sbjct: 258 MTILAPVFEAPNTDGIDPDSC 278
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 186/395 (47%), Gaps = 54/395 (13%)
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
T NT A AI S + GG +YVPAG ++TG L SH TL L + L + +
Sbjct: 16 TRNTPAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSVLRFTPRFD 72
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF------ 243
+P P R Y+ LI+G L V + G+ G I+GQG WW +
Sbjct: 73 AYP-----PVQTRWSGYEMWGYSPLIYGNGLKQVAIKGE-GVIEGQGQAWWDAYRVIRAG 126
Query: 244 -------HKGKL--------------------KYTRPYLMEFMYTDNIQISSLTLLNSPS 276
H KL ++ RP L++ M+ + + + +TL NSP
Sbjct: 127 GAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSPF 186
Query: 277 WNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
WN H VY ++ ++G+ P T+PN DG++ DSC+N RI DC+ GDDC+ +KSG DE
Sbjct: 187 WNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGIDE 246
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAV 396
G G PT+ + + T + + + LGSE +GGI++V + I T+ G+RIKT
Sbjct: 247 DGRRVGRPTENVAVTNCTMLHGHGGVV-LGSETAGGIRNVTISNCIFIGTDRGIRIKTNR 305
Query: 397 GRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPVIQG------INY 446
RGG V+++ + + M + + Y D P+A+PV +G I
Sbjct: 306 ARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVTEGTPVIRHIQI 365
Query: 447 RDIVADNVSMAAR-LEGISGDPFTGICIANATIGM 480
D+ A N AA + G+ P + + + T M
Sbjct: 366 SDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEM 400
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 197/423 (46%), Gaps = 53/423 (12%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA + G +GK NTK I++L++ GG L+ PAG +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
TL L A LL S + +++ P ++ R + LI+ + ++ + G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 232 IDGQGALWWQQFHKGKL----------------------------------------KYT 251
+DGQG WW +F + + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFF 190
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
RP ++ + ++I + ++NSP W V+P + N+ ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESC 249
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
N I DC+I GDDC+ +KSG D G+P + + I T ++ + + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLAGHGG-VVIGSEMSG 308
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN 431
++ V + T+ G+RIK+ GRGG V+DI V + M +K + S
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPA 368
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTC 491
+ P+ + ++ + + ++ G+ P + I + + I A+ K + C
Sbjct: 369 EAKSERTPIFRNVHISGMTVTDAKTPIKIVGLEEAPISDIVLRDIHI-QGARQKCIFEDC 427
Query: 492 ADI 494
I
Sbjct: 428 ERI 430
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 114/172 (66%), Gaps = 5/172 (2%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SIT+FGGVGDG+T NT A + A+ Y G L +P G WL+GSFNL SH
Sbjct: 99 RPEVVSITEFGGVGDGRTLNTWALRKAV-----YRIQCGTTLLLPVGTWLSGSFNLTSHM 153
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
TL+L + A L A+QD W +++PLPSYGRGR+ RY S I G L DV++TGD G I
Sbjct: 154 TLFLARGAVLKATQDTRSWLLMEPLPSYGRGRELPGARYASFIHGNGLRDVVITGDKGVI 213
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
DGQG +WW + + L++TRP L+EF+++ I IS++ L NS WN+HPVYS
Sbjct: 214 DGQGDVWWNMWRRRTLQHTRPNLVEFVHSSGIHISNVVLKNSLFWNIHPVYS 265
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 170/323 (52%), Gaps = 21/323 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNVSMAA 458
+ I++ +I A NV +A
Sbjct: 319 ERTPAFRRIHFSNITARNVHASA 341
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 193/422 (45%), Gaps = 68/422 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S S+TD+G VGDG T NT+AF AI SQ GG ++ +PAG WLTG +L S L
Sbjct: 26 RSFSVTDYGAVGDGVTDNTEAFHKAIAACSQA---GGGRVVIPAGVWLTGPLSLASRLDL 82
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG------- 227
+ A +L S+ ++P+I + + + R S + G L V +TG
Sbjct: 83 HAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAITGAGVFDGG 137
Query: 228 ----------------------DNGTIDGQGALWWQ----------------------QF 243
G +D +WW +
Sbjct: 138 GDAWRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLKREGSTDPKD 197
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
++ Y RP L+ + + T NSP+WN+HP ++ ++G+T+ P N
Sbjct: 198 YEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNG 257
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ DSC +EDC GDD + +KSG DE G A G+P + ++IR + +
Sbjct: 258 DGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCRVYHGHGGFV 317
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT-----MKWA 418
+GSEMSGG++ +R ED + T+ G+R K+ GRGG V+DI + + M++ + +
Sbjct: 318 -IGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFH 376
Query: 419 FWMTGNYGSH-ADNHYDPKAL--PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIAN 475
+ G GS A + P ++ P+ +GI RD+ A + G+ P G+ + N
Sbjct: 377 LFYEGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVEN 436
Query: 476 AT 477
T
Sbjct: 437 FT 438
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 210/443 (47%), Gaps = 64/443 (14%)
Query: 78 KLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFK 137
+L LL VV L + F + + +I D GG +G+ T+A +
Sbjct: 3 RLTKLLFVVCLFA--------------FSQSLTAANPGWTNILDVGGNNEGQLC-TEAIQ 47
Query: 138 DAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKP 196
AI++ ++ GG L+ PAG +LTG+ ++ S+ TL+L A L S + + + P ++
Sbjct: 48 SAIDKAAEA---GGGTLFFPAGDYLTGAIHMKSNTTLHLDAGAVLRFSTNFDHYLPFVQ- 103
Query: 197 LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK----------- 245
R ++ LI+ ++ +TG G IDGQG WW + ++
Sbjct: 104 ----MRWEGTVMNNFSPLIYAYEAENITITG-RGKIDGQGKDWWMEMYRIHEAAPETLEE 158
Query: 246 -----------------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
+LK+ RP L++ N++I +T++NSP W V+P
Sbjct: 159 SKYQKMWTAANEGLETSPNYQKTMRLKFFRPPLIQPFRCKNVRIEGVTIVNSPFWTVNPA 218
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
+ N+ + G+TI P SPNTDGINP SC N I D +I GDDC+ +KSG D G +
Sbjct: 219 FCDNVTITGVTIENP-PSPNTDGINPTSCRNVHISDSHISVGDDCITIKSGRDMDGRKWD 277
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
PT+ + I T +S + + +GSE+SG I+ V + T+ G+R+K A GRGG V
Sbjct: 278 TPTENVTITNCTMLSGHGG-VVIGSEVSGSIRKVTISNCVFDGTDRGIRLKAARGRGGVV 336
Query: 403 KDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLE 461
++I V + M ++ A M Y + + P + I+ ++ +++A ++
Sbjct: 337 EEIRVDNVVMKDIQLEAIVMNLFYDKNTKEGPVTEETPAFRNIHISNVTGSQINVAGKIL 396
Query: 462 GISGDPFTGICIANATIGMAAKH 484
GI P I +N I M AK
Sbjct: 397 GIPEMPIDQISFSN--INMDAKE 417
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 34/394 (8%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ + DFG GDGKT +T A + AI S G + P G +L L S+
Sbjct: 78 ESFVVDVRDFGAKGDGKTLDTFAVQAAI-----MSCPEGGTVVFPPGTYLLTPVFLKSNL 132
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGR-------DAAAGRYTSLIFGTNLTDVIV 225
T+ + KDA LL + +P++ L S G A + SL+ G + +V +
Sbjct: 133 TIEIQKDAVLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVENVRI 192
Query: 226 TGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
G G ID WW ++ + RP + NI I +T+ NSPSW VHP++
Sbjct: 193 IG-QGVIDANANFDDWWFNPKVKRIAW-RPRSIFLNRCKNILIEGITIRNSPSWTVHPLF 250
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
++ + + I+ P SPNTDGINP+SC+N I C I GDDCVAVK+G E + +
Sbjct: 251 CKDLKLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFDV 310
Query: 344 PTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
P++ + IR C+ + + +GSEMS G+++V+ + +NT+ G+RIKT RGGYV
Sbjct: 311 PSENIEIR--NCLMEHGHGAVVIGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYV 368
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP------------KALPVIQGINYRDIV 450
+I ++ + M+ + + Y AD YDP + P I I ++++
Sbjct: 369 DEIELKNVQMNGVFVPLAINCFYNCGAD--YDPLYSSDKVVADVNERTPTIGSIVMKNVL 426
Query: 451 ADNV-SMAARLEGISGDPFTGICIANATIGMAAK 483
++V SMAA + G+ I + N I ++ +
Sbjct: 427 CEDVKSMAAFVYGLPEKKIEKIYMENVRIEISKE 460
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 191/382 (50%), Gaps = 27/382 (7%)
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
+ S T + I+QL Q GG +L +G + TGS L S+ L+L A L S D
Sbjct: 13 EKSVTATIQGYIDQLHQA---GGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDP 69
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF--HKG 246
E+PV+ R Y S I+ ++ +TG GTIDGQG WW F H
Sbjct: 70 KEYPVV-----VSRWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPE 123
Query: 247 KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGI 306
+L+Y RP L+ F I + ++L+NSPSW V+P+ +I V I I P SPNTDGI
Sbjct: 124 QLEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGI 183
Query: 307 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALG 366
+P+SC N RI +C I GDDC+A+KSG +E + + + I + + + LG
Sbjct: 184 DPESCKNVRISNCLIDVGDDCIAIKSGTEE--TKERVSCENITISNCQMLHGHGG-VVLG 240
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY- 425
SEMSG I++V + +T+ G+R+K+ GRGG ++DI V + M + F + Y
Sbjct: 241 SEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYF 300
Query: 426 -GSHADNHY----DP----KALPVIQGINYRDIVADNVSMAA-RLEGISGDPFTGICIAN 475
G Y +P + P + I++ +I A NV AA + G+S + I
Sbjct: 301 CGPKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHE 360
Query: 476 ATIGMAAKHKKVPWTCADIGGM 497
I MA + +P A + GM
Sbjct: 361 VAISMAK--EPIPGKPAMMTGM 380
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 191/382 (50%), Gaps = 27/382 (7%)
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
+ S T + I+QL Q GG +L +G + TGS L S+ L+L A L S D
Sbjct: 13 EKSVTATIQGYIDQLHQA---GGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDP 69
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF--HKG 246
E+PV+ R Y S I+ ++ +TG GTIDGQG WW F H
Sbjct: 70 KEYPVV-----VSRWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPE 123
Query: 247 KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGI 306
+L+Y RP L+ F I + ++L+NSPSW V+P+ +I V I I P SPNTDGI
Sbjct: 124 QLEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGI 183
Query: 307 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALG 366
+P+SC N RI +C I GDDC+A+KSG +E + + + I + + + LG
Sbjct: 184 DPESCKNVRISNCLIDVGDDCIAIKSGTEE--TKERVSCENITISNCQMLHGHGG-VVLG 240
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY- 425
SEMSG I++V + +T+ G+R+K+ GRGG ++DI V + M + F + Y
Sbjct: 241 SEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYF 300
Query: 426 -GSHADNHY----DP----KALPVIQGINYRDIVADNVSMAA-RLEGISGDPFTGICIAN 475
G Y +P + P + I++ +I A NV AA + G+S + I
Sbjct: 301 CGPKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHE 360
Query: 476 ATIGMAAKHKKVPWTCADIGGM 497
I MA + +P A + GM
Sbjct: 361 VAISMAK--EPIPGKPAMMTGM 380
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
S GG + VPAG++LTG+ L S+ L+L A L S D ++P++ + R
Sbjct: 28 SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + +F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 195/400 (48%), Gaps = 40/400 (10%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A I D G V GKT NT A ++ + GG ++ VPAG+WLTG +L S+
Sbjct: 51 ARVEDIRDHGAVPGGKTKNTAA---FAQAIAACAEAGGGRVLVPAGRWLTGPIHLRSNIE 107
Query: 174 LYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L +DA ++ S ++ PV+ R Y+ I+ + T+V +TG G +
Sbjct: 108 LHLAQDAEVIFSDRFEDYLPVV-----LVRVGGIELYNYSPFIYARDCTNVAITGP-GRL 161
Query: 233 DGQGALWW---------------------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTL 271
+G WW Q+ RP + F N+ + T+
Sbjct: 162 NGNSQRWWAWKTKETKRIFRLAPDGVPVEQRIFGTPEAAIRPNFVVFFNCRNVLMEGFTI 221
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
P+W +HPVYS NI+++ + ++ PN DGI+PDSC N IE C +GDDCV +K
Sbjct: 222 GGGPNWTIHPVYSENIIIRRVHVLT--EGPNNDGIDPDSCRNVLIEHCVFDTGDDCVVLK 279
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SG++E G PT+ +V+R + + + +GSEMSG +++V D T+ VR
Sbjct: 280 SGYNEDGWRVARPTENVVMRWCSSARGHGGLV-VGSEMSGDVRNVYMHDCDFAGTDRAVR 338
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
IK+ GRGG V++I+ + + M+ + +YG+ + + K P+ + I+ R +
Sbjct: 339 IKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQAFTEKP-PLFRNIHVRRVT 397
Query: 451 ADNVSMAARLEGISGDPFTGICIANATI----GMAAKHKK 486
AD A R+ G++ P + + TI G+ A+H +
Sbjct: 398 ADGAPAAIRIAGLADSPIEHVTFEDLTIQSTRGVIAQHVR 437
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 183/373 (49%), Gaps = 40/373 (10%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
N ++A+++L G + VP G+W +G+ +L S+ LYL + + S + ++
Sbjct: 11 NQNVIQEAVDRLPA----SGGTVIVPRGEWKSGAIHLKSNVKLYLEEGCVIHFSSCMEDY 66
Query: 192 -PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---------- 240
P P + R Y+ LI+ + +V + G G +DG G+ WW
Sbjct: 67 LP-----PVFTRWEGVECYNYSPLIYAADCENVTICG-TGVLDGAGSAWWHWKKLQQNAA 120
Query: 241 --------------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
++ + RP ++F+ ++ + T+ + P W +HPVY +
Sbjct: 121 DHLIRAESQEIPVEERIFATRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCED 180
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
++V+G+T+ PNTDG NPDSC IEDC +GDDC+A+ SG +E G G P +
Sbjct: 181 VVVRGVTV--NTKGPNTDGCNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCE 238
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
Q+ ++ I ++A +A+GS MSGGI D+ D A TE G+RIK+ GRGGYVK +
Sbjct: 239 QIEVKNCRFIGGHAA-VAIGSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVN 297
Query: 407 VRGMTMHTM-KWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISG 465
V M M + K A ++ NYGS KA P + + I ++ ++ L G+
Sbjct: 298 VERMQMDEIEKEAIEVSMNYGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLPE 356
Query: 466 DPFTGICIANATI 478
P I + + +I
Sbjct: 357 SPLREITLEDVSI 369
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 200/429 (46%), Gaps = 53/429 (12%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
+ A+ A + + G NT+ + IN+L++ GG L+ P+G +LT S
Sbjct: 13 FVALQVFAERVDMREAGVDNQEALKNTEIINNTINRLNKA---GGGTLFFPSGDYLTASI 69
Query: 167 NLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIV 225
++ S+ TL L A L S + +++ P ++ R + LI+ T+ ++ +
Sbjct: 70 HMKSNITLELEAGATLRFSDNFDDYMPFVEM-----RHEGVMMKSFQPLIYATDAENITI 124
Query: 226 TGDNGTIDGQGALWWQQFHK--------GKL----------------------------- 248
G+ G +DGQG WW++F + GK
Sbjct: 125 KGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHST 183
Query: 249 ---KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
++ RP ++ + N++I +T++NSP W V+P + N+ V+G+TI V SPNTDG
Sbjct: 184 LDRRFLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPSPNTDG 242
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
INP+SC+N I DC+I GDDC+ +KSG D G P + + I T +S + + +
Sbjct: 243 INPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGG-VVI 301
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSEMSGG++ V + T+ G+RIK+ GRGG V+DI V + M +K +
Sbjct: 302 GSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLK 361
Query: 426 GSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHK 485
S + PV + I + +++G+ P GI + + AK +
Sbjct: 362 YSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVN-DAKEE 420
Query: 486 KVPWTCADI 494
+ C D+
Sbjct: 421 CLFRDCKDL 429
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
S GG + VPAG++LTG+ L S+ L+L A L S D ++P++ + R
Sbjct: 28 SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
S GG + VPAG++LTG+ L S+ L+L A L S D ++P++ + R
Sbjct: 28 SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
DS +T IEDC I G D +A+KSGWDEYGIAYG PT + IRR+ S +++A GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
MSGGI +V E + N+ SG+ +T GRGGY+++I + + M + AF TG GSH
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
D+H+DP ALPV+ I ++++ N+++A GI PFT IC++N ++ +
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPP-ASIS 229
Query: 489 WTCADIGGMTSGVTPPPC 506
W C+++ G + V P PC
Sbjct: 230 WVCSNVSGFSQWVFPEPC 247
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 192/422 (45%), Gaps = 68/422 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S S+TD+G VGDG T NT+AF AI SQ GG ++ +PAG WLTG +L S L
Sbjct: 26 RSFSVTDYGAVGDGVTDNTEAFHKAIAACSQA---GGGRVVIPAGVWLTGPLSLASRLDL 82
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG------- 227
+ A +L S+ ++P+I + + + R S + G L V +TG
Sbjct: 83 HAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAITGAGVFDGG 137
Query: 228 ----------------------DNGTIDGQGALWWQ----------------------QF 243
G +D +WW +
Sbjct: 138 GDAWRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLKREGSTDPKD 197
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
++ Y RP L+ + + T NSP+WN+HP ++ ++G+T+ P N
Sbjct: 198 YEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNG 257
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ DSC +EDC GDD + +KSG DE G G+P + ++IR + +
Sbjct: 258 DGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCRVYHGHGGFV 317
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT-----MKWA 418
+GSEMSGG++ +R ED + T+ G+R K+ GRGG V+DI + + M++ + +
Sbjct: 318 -IGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFH 376
Query: 419 FWMTGNYGSH-ADNHYDPKAL--PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIAN 475
+ G GS A + P ++ P+ +GI RD+ A + G+ P G+ + N
Sbjct: 377 LFYEGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVEN 436
Query: 476 AT 477
T
Sbjct: 437 FT 438
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
S GG + VPAG++LTG+ L S+ L+L A L S D ++P++ + R
Sbjct: 28 SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
S GG + VPAG++LTG+ L S+ L+L A L S D ++P++ + R
Sbjct: 28 SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
S GG + VPAG++LTG+ L S+ L+L A L S D ++P++ + R
Sbjct: 28 SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 199/411 (48%), Gaps = 59/411 (14%)
Query: 128 GKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
G+ NT I++L+ ++GG L+ PAG +LTGS ++ S+ TL L A L S++
Sbjct: 38 GRKLNTALINSTIDRLN---ANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 188 LNEWPVIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
+++ LP R + LI+ + ++ + G+ GT+DGQG WW +F +
Sbjct: 95 FDDF-----LPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRV 148
Query: 246 -------------------------------------GKL--KYTRPYLMEFMYTDNIQI 266
G L ++ RP + + N+++
Sbjct: 149 LVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRV 208
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+T++NSP W V+P + N+ ++GIT I V SPNTDGINP+SC N I DC+I GDD
Sbjct: 209 EGVTIINSPFWTVNPEFCDNVTIKGIT-IHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+ +KSG D G+P + + I T +S + + +GSEMSGG++ V + T
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEMSGGVKKVTISNCVFDGT 326
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKA--LPVIQG 443
+ G+R+K+ GRGG V+DI V + M + K A + Y +PK+ P +
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRN 383
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
I + +V+ + G+ P TGI + + I AK + V C D+
Sbjct: 384 IYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI-QNAKQRCVFEDCKDL 433
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 203/407 (49%), Gaps = 51/407 (12%)
Query: 111 SCRAHSA-SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI 169
S +A S ++T +G D T A K AI+ S+ GG +Y PAGK+LTG+ +L
Sbjct: 24 SAQAQSYYNVTKYGAKNDSSKLATVAIKKAIDAASKA---GGGTVYFPAGKYLTGAIHLK 80
Query: 170 SHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
S+ T+++ A L S + +++ P+++ S G D + ++ L + ++ + G
Sbjct: 81 SNITIFIDAGAELHFSDNFDDYLPMVE---SRYEGVDVKS--FSPLFYAYKAENISIIG- 134
Query: 229 NGTIDGQGALWWQ--------------QFHKGKLK---------------YTRPYLMEFM 259
G IDG G WW Q+ KL + RP ++ M
Sbjct: 135 RGLIDGHGKKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTM 194
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ N+ I +T+ NSP W V+P +S N+ + +TI P SPNTDGINP+SC N I DC
Sbjct: 195 FCKNVLIDGITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTDGINPESCKNVHISDC 253
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+I GDDC+ +KSG DE G +P + VI T +S + + +GSEMSG ++ +
Sbjct: 254 HISVGDDCITIKSGKDEPGRRMAIPAENYVITNCTMLSGHGG-VVIGSEMSGDVRKITIS 312
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK-WAFWMTGNYGSHADNHYDPKA- 437
+ T+ G+RIKTA GRGG V++I V + M +K A + Y A + P +
Sbjct: 313 NCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDMQY---AKTNVQPVSD 369
Query: 438 -LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
P + I++ +I V+ AA L G+ P I + I M AK
Sbjct: 370 RTPKFRNIHFSNITGQ-VNQAAYLNGLEEMPIENITFND--INMEAK 413
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 193/406 (47%), Gaps = 54/406 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
IT +G GDG NT A AI S + GG +YVPAG ++TG L SH TL L
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+ L + + + P+ + G + Y+ LI+G L V + G+ G I+GQG
Sbjct: 63 GSMLRFTPRFDAY---APVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQA 116
Query: 239 WWQQF-------------HKGKL--------------------KYTRPYLMEFMYTDNIQ 265
WW + H KL ++ RP L++ M+ + +
Sbjct: 117 WWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ +TL NSP WN H VY ++ ++G+ P T+PN DG++ DSC+N RI DC+ GD
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+ +KSG D G G PT+ + + T + + + LGSE +GGI++V + I
Sbjct: 237 DCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHGGVV-LGSETAGGIRNVTISNCIFIG 295
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPVI 441
T+ G+RIKT RGG V+++ + + M + + Y D P+A+PV
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVT 355
Query: 442 QG------INYRDIVADNVSMAAR-LEGISGDPFTGICIANATIGM 480
+G I D+ A N AA + G+ P + + + T M
Sbjct: 356 EGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEM 401
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 178/347 (51%), Gaps = 22/347 (6%)
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
SDGG + VPAG++LTG+ L S+ L+L A L S D ++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--GKLKYTRPYLMEFMYTDNIQ 265
Y S I+ N+ ++ VTG GT+DG G WW F L Y RP LM F I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + L+ SPSW ++P+ SN +TI+ P SPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGD 201
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+K+G ++ + + + I T + + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTED--TYERIACENITITNCTMVHGHGG-VVLGSEMSGSIRNITISNCIFQE 258
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKALPV- 440
T+ G+R+K+ GRGG V+DI V + M + F + Y G Y + A P+
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKTAYPID 318
Query: 441 -----IQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+ I++ +I A NV + A + G++ I N + MA
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMA 365
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 200/429 (46%), Gaps = 53/429 (12%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
+ A+ A + + G NT+ + IN+L++ GG L+ P+G +LT S
Sbjct: 13 FVALQVFAERVDMREAGVDNQEALKNTEIINNTINRLNKA---GGGTLFFPSGDYLTASI 69
Query: 167 NLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIV 225
++ S+ TL L A L S + +++ P ++ R + LI+ T+ ++ +
Sbjct: 70 HMKSNITLELEAGATLRFSDNFDDYMPFVEM-----RHEGVMMKSFQPLIYATDAENITI 124
Query: 226 TGDNGTIDGQGALWWQQFHK--------GKL----------------------------- 248
G+ G +DGQG WW++F + GK
Sbjct: 125 KGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHST 183
Query: 249 ---KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
++ RP ++ + N++I +T++NSP W V+P + N+ V+G+TI V SPNTDG
Sbjct: 184 LDRRFLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPSPNTDG 242
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
INP+SC+N I DC+I GDDC+ +KSG D G P + + I T +S + + +
Sbjct: 243 INPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGG-VVI 301
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSEMSGG++ V + T+ G+RIK+ GRGG V+DI V + M +K +
Sbjct: 302 GSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLK 361
Query: 426 GSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHK 485
S + PV + I + +++G+ P GI + + AK +
Sbjct: 362 YSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVN-DAKEE 420
Query: 486 KVPWTCADI 494
+ C D+
Sbjct: 421 CLFRDCKDL 429
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 186/391 (47%), Gaps = 46/391 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I ++G GD +T+A + A+++ ++ G +YVP+G ++TG + TLYL
Sbjct: 11 IREYGATGDSDEPDTEAIQAALDECAE----SGGTVYVPSGTYVTGPLRVGDRTTLYLDA 66
Query: 179 DAFLLASQDLNEWPVIKPL----PSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
A L D +P ++ YG + + + +V +TG GTIDG
Sbjct: 67 GATLQFVGDYEAFPTVQSRWEGWNQYG---------FHPCLLVDDAENVSITG-RGTIDG 116
Query: 235 QGALWWQ------------------QFHKGKLKYT-------RPYLMEFMYTDNIQISSL 269
G WWQ +F + K RP L + ++N+ +S +
Sbjct: 117 GGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQIYGSENVSVSGV 176
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
TL NSP WN H VYS N+ + + I P +PN DGI+ DS RI D YI +GDD +
Sbjct: 177 TLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAIC 236
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+KSG + G G P Q+ + T + + + +GSEMSG ++DV + +T+ G
Sbjct: 237 IKSGKNAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEMSGDVRDVTVTNCTFTDTDRG 295
Query: 390 VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYR 447
VRIKTA RGG V+D+ + M + F + G Y D+ +P + P+++ +++
Sbjct: 296 VRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFT 355
Query: 448 DIVADNVSMAARLEGISGDPFTGICIANATI 478
+I A V A G+ F GI ++ I
Sbjct: 356 NITARQVETAGFFAGLPEQYFEGISFSDVQI 386
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 198/403 (49%), Gaps = 58/403 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
IT +G VGDG T NT+AF+DAI + GG ++ VP G++LTG+ L S L++ +
Sbjct: 52 ITRYGAVGDGVTKNTRAFRDAIRACHRA---GGGRVVVPRGRFLTGAIQLRSQVELHVRE 108
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
+L S D ++ P++ + R Y+S I+ D+ +TG GT+DGQG
Sbjct: 109 GGTVLFSTDPRDYLPMV-----FTRWEGTECWNYSSFIYARGQQDLAITG-RGTLDGQGM 162
Query: 237 ALWWQQFHK---------------------------GKLKYTRPYLMEFMYTDNIQISSL 269
A W+ + G + RP +++F NI + +
Sbjct: 163 AGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDI 222
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
T+L P W +HPV N+ ++ + +I + N+DG++P+ ++ I C + DD +A
Sbjct: 223 TVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSIA 280
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCI-SPYSATIALGSEMSGGIQDVRAEDIK------ 382
VKSG DE G G+P++ +VIR C+ S +A+GSEMSGG++DV AED +
Sbjct: 281 VKSGRDEDGHRIGVPSRNIVIR--DCVFSGRWGGVAVGSEMSGGVRDVFAEDCRINPVDF 338
Query: 383 --AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKALP 439
N V IKT RGG + +Y+R T + + ++T Y +
Sbjct: 339 PGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQG-----ERPA 393
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI-GMA 481
VI+ I D+V D A LEG+ DPFTG+ IA GMA
Sbjct: 394 VIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFTGMA 436
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 198/411 (48%), Gaps = 59/411 (14%)
Query: 128 GKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
G+ NT I++L+ ++GG L+ PAG +LTGS ++ S+ TL L A L S++
Sbjct: 38 GRKLNTALINSTIDRLN---ANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 188 LNEWPVIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
+++ LP R + LI+ + ++ + G+ GT+DGQG WW +F +
Sbjct: 95 FDDF-----LPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRV 148
Query: 246 -------------------------------------GKL--KYTRPYLMEFMYTDNIQI 266
G L ++ RP + + N+++
Sbjct: 149 LVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRV 208
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+ ++NSP W V+P + N+ ++GIT I V SPNTDGINP+SC N I DC+I GDD
Sbjct: 209 EGVKIINSPFWTVNPEFCDNVTIKGIT-IHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+ +KSG D G+P + + I T +S + + +GSEMSGG++ V + T
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEMSGGVKKVTISNCVFDGT 326
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKA--LPVIQG 443
+ G+R+K+ GRGG V+DI V + M + K A + Y +PK+ P +
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRN 383
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
I + +V+ + G+ P TGI + + I AK + V C D+
Sbjct: 384 IYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI-QNAKQRCVFEDCKDL 433
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 198/403 (49%), Gaps = 58/403 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
IT +G VGDG T NT+AF+DAI + GG ++ VP G++LTG+ L S L++ +
Sbjct: 67 ITRYGAVGDGVTKNTRAFRDAIRACHRA---GGGRVVVPRGRFLTGAIQLRSQVELHVRE 123
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
+L S D ++ P++ + R Y+S I+ D+ +TG GT+DGQG
Sbjct: 124 GGTVLFSTDPRDYLPMV-----FTRWEGTECWNYSSFIYARGQQDLAITG-RGTLDGQGM 177
Query: 237 ALWWQQFHK---------------------------GKLKYTRPYLMEFMYTDNIQISSL 269
A W+ + G + RP +++F NI + +
Sbjct: 178 AGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDI 237
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
T+L P W +HPV N+ ++ + +I + N+DG++P+ ++ I C + DD +A
Sbjct: 238 TVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSIA 295
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCI-SPYSATIALGSEMSGGIQDVRAEDIK------ 382
VKSG DE G G+P++ +VIR C+ S +A+GSEMSGG++DV AED +
Sbjct: 296 VKSGRDEDGHRIGVPSRNIVIR--DCVFSGRWGGVAVGSEMSGGVRDVFAEDCRINPVDF 353
Query: 383 --AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKALP 439
N V IKT RGG + +Y+R T + + ++T Y +
Sbjct: 354 PGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQG-----ERPA 408
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI-GMA 481
VI+ I D+V D A LEG+ DPFTG+ IA GMA
Sbjct: 409 VIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFTGMA 451
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 198/411 (48%), Gaps = 59/411 (14%)
Query: 128 GKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
G+ NT I++L+ ++GG L+ PAG +LTGS ++ S+ TL L A L S++
Sbjct: 38 GRKLNTTLINSTIDRLN---ANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 188 LNEWPVIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
+++ LP R + LI+ + ++ + G+ GT+DGQG WW +F +
Sbjct: 95 FDDF-----LPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRV 148
Query: 246 -------------------------------------GKL--KYTRPYLMEFMYTDNIQI 266
G L ++ RP + + N+++
Sbjct: 149 LVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRV 208
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+ ++NSP W V+P + N+ ++GIT I V SPNTDGINP+SC N I DC+I GDD
Sbjct: 209 EGVKIINSPFWTVNPEFCDNVTIKGIT-IHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+ +KSG D G+P + + I T +S + + +GSEMSGG++ V + T
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEMSGGVKKVTISNCVFDGT 326
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKA--LPVIQG 443
+ G+R+K+ GRGG V+DI V + M + K A + Y +PK+ P +
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRN 383
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
I + +V+ + G+ P TGI + + I AK + V C D+
Sbjct: 384 IYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI-QNAKQRCVFEDCKDL 433
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 197/411 (47%), Gaps = 59/411 (14%)
Query: 128 GKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
G+ NT I++L+ + GG L+ PAG +LTGS ++ S+ TL L A L S++
Sbjct: 38 GRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 188 LNEWPVIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
+++ LP R + LI+ + ++ + G+ GT+DGQG WW +F +
Sbjct: 95 FDDF-----LPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRV 148
Query: 246 -------------------------------------GKL--KYTRPYLMEFMYTDNIQI 266
G L ++ RP + + N+++
Sbjct: 149 LVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRV 208
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+ ++NSP W V+P + N+ ++GIT I V SPNTDGINP+SC N I DC+I GDD
Sbjct: 209 EGVKIINSPFWTVNPEFCDNVTIKGIT-IHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+ +KSG D G+P + + I T +S + + +GSEMSGG++ V + T
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEMSGGVKKVTISNCIFDGT 326
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKA--LPVIQG 443
+ G+R+K+ GRGG V+DI V + M + K A + Y +PK+ P +
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRN 383
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
I + +V+ + G+ P TGI + + I AK + V C D+
Sbjct: 384 IYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI-QNAKQRCVFEDCKDL 433
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 197/411 (47%), Gaps = 59/411 (14%)
Query: 128 GKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
G+ NT I++L+ + GG L+ PAG +LTGS ++ S+ TL L A L S++
Sbjct: 38 GRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 188 LNEWPVIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
+++ LP R + LI+ + ++ + G+ GT+DGQG WW +F +
Sbjct: 95 FDDF-----LPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRV 148
Query: 246 -------------------------------------GKL--KYTRPYLMEFMYTDNIQI 266
G L ++ RP + + N+++
Sbjct: 149 LVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRV 208
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+ ++NSP W V+P + N+ ++GIT I V SPNTDGINP+SC N I DC+I GDD
Sbjct: 209 EGVKIINSPFWTVNPEFCDNVTIKGIT-IHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+ +KSG D G+P + + I T +S + + +GSEMSGG++ V + T
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEMSGGVKKVTISNCVFDGT 326
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKA--LPVIQG 443
+ G+R+K+ GRGG V+DI V + M + K A + Y +PK+ P +
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRN 383
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
I + +V+ + G+ P TGI + + I AK + V C D+
Sbjct: 384 IYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI-QNAKQRCVFEDCKDL 433
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 197/411 (47%), Gaps = 59/411 (14%)
Query: 128 GKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
G+ NT I++L+ + GG L+ PAG +LTGS ++ S+ TL L A L S++
Sbjct: 38 GRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 188 LNEWPVIKPLPSYG-RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
+++ LP R + LI+ + ++ + G+ GT+DGQG WW +F +
Sbjct: 95 FDDF-----LPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRV 148
Query: 246 -------------------------------------GKL--KYTRPYLMEFMYTDNIQI 266
G L ++ RP + + N+++
Sbjct: 149 LVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRV 208
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+ ++NSP W V+P + N+ ++GIT I V SPNTDGINP+SC N I DC+I GDD
Sbjct: 209 EGVKIINSPFWTVNPEFCDNVTIKGIT-IHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+ +KSG D G+P + + I T +S + + +GSEMSGG++ V + T
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEMSGGVKKVTISNCVFDGT 326
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKA--LPVIQG 443
+ G+R+K+ GRGG V+DI V + M + K A + Y +PK+ P +
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRN 383
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
I + +V+ + G+ P TGI + + I AK + V C D+
Sbjct: 384 IYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI-QNAKQRCVFEDCKDL 433
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 188/375 (50%), Gaps = 50/375 (13%)
Query: 150 GGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAG 209
GG +Y PAGK+LTG +L S+ T+++ A L S + + + + +PS G +
Sbjct: 57 GGGTVYFPAGKYLTGPIHLKSNITIFIDAGAELHFSDNFDHY--LPMVPSRWEGTEVI-- 112
Query: 210 RYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLK-------------------- 249
++ L + ++ ++ + G G IDG G WW+ F + ++K
Sbjct: 113 NFSPLFYAKDVENIAIVG-RGLIDGHGKNWWR-FSEVEVKKLTEDSKWQKEFKRLNPNVL 170
Query: 250 -----------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
+ RP ++FM N+QI + + NSP W ++P Y N+ V GITI P
Sbjct: 171 APDLPGWIERGFLRPPFIQFMNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGITIDNP- 229
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
SPNTDGINP+SC N RI +C+I GDDC+ +KSG D G +P + I T +
Sbjct: 230 PSPNTDGINPESCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCTMLRG 289
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK-W 417
+ + +GSEMSGG++++ + T+ G+RIK+A GRGG V+DI V + M ++
Sbjct: 290 HGG-VVIGSEMSGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRDQ 348
Query: 418 AFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIAN 475
A + Y A + +P + P+ + I+ DI A + + A L G+ P + I N
Sbjct: 349 AIVLDLQY---AKTNPEPISERTPIFRNIHISDITA-STNRAGYLNGLEELPISNISFNN 404
Query: 476 ----ATIGMAAKHKK 486
A G K+ K
Sbjct: 405 VNMTANTGFLIKNSK 419
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 189/394 (47%), Gaps = 53/394 (13%)
Query: 134 KAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW- 191
K D IN+ + + +++GG +Y PAG +LT + + S+ TL + A L S ++
Sbjct: 38 KPCTDLINRAIDEAAAEGGGTIYFPAGTYLTATIRMKSNITLDIESGATLRFSDRFEDYL 97
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ---------Q 242
P +K R + LI+ N ++ +TG GT+DG G WW +
Sbjct: 98 PFVKI-----RWEGTVMNTLSPLIYADNADNLTITG-RGTLDGNGFKWWAWEVDTRRLIK 151
Query: 243 FHKGKL-----------------------------KYTRPYLMEFMYTDNIQISSLTLLN 273
+ GKL + RP ++F +NI I ++ ++N
Sbjct: 152 ENGGKLPSLNKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFFECNNIVIENVKIIN 211
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSP---NTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
SP W ++P + NI V G+TI P +P NTDGINP SC+N RI DC+I GDDC+ +
Sbjct: 212 SPFWTINPAFCDNITVHGVTINNPSKNPKGPNTDGINPTSCSNVRISDCFISVGDDCITI 271
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
KSG D G YG P + L I +S + + +GSEMSGG++ V + T++G+
Sbjct: 272 KSGRDADGRKYGKPCQNLTITNCIMLSGHGG-VVIGSEMSGGVKRVAISNCVFDGTDAGI 330
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI 449
R+K + GRGG V+DI V + M + + AF Y + + PV + I+ +I
Sbjct: 331 RLKASRGRGGVVEDIRVDNIVMKNIGRNAFIFDLFYDKLSKPEPVSERTPVFRNIHLSNI 390
Query: 450 VADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
+V ++GI P + +N I M A+
Sbjct: 391 TGSDVKQIGYIKGIEEMPINELSFSN--INMEAE 422
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 183/387 (47%), Gaps = 38/387 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I +FG SNT+A + A+++ + G + VP G ++TG + TL+L
Sbjct: 11 IREFGAQSGSDDSNTEAIQTALDECAGT----GGTVSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A L D +P +K S G D L+ G + V +TG GTIDG G
Sbjct: 67 GATLRFVGDYEAFPTVK---SRWEGWDQVGFHPCLLVDGADT--VSITG-RGTIDGNGEY 120
Query: 239 WWQ------------------QFHKGKLKYT-------RPYLMEFMYTDNIQISSLTLLN 273
WWQ +F K RP L++ +N+ +S +TL N
Sbjct: 121 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 180
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SP WN H VYS N+ + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
D G G P Q+ + T + + + +GSEMSG ++DV + +T+ G+RIK
Sbjct: 241 KDAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEMSGDVRDVTVTNCTFTDTDRGIRIK 299
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVA 451
T GRGG V+D+ + M + F + G Y + D+ +P + P+++ +++ +I A
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 359
Query: 452 DNVSMAARLEGISGDPFTGICIANATI 478
NV A G+ F GI + I
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 228/508 (44%), Gaps = 79/508 (15%)
Query: 62 TTMELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDS---------------FE 106
T ++L+ ++L VT LL SQ +++ A + + F
Sbjct: 451 TVLDLTLSAKLEDVVTTFESLLQPARRQSQAASQTESATEMAARGKASWRPLGFVCALFL 510
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVP--AGKWLTG 164
+ RA ++D+G D K+ +T A + AI S+ +GG L P G +LTG
Sbjct: 511 LILGTTRACICDVSDYGARDDNKSISTHAIQTAIEACSR-CPEGGHVLLRPLDKGIYLTG 569
Query: 165 SFNLISHFTLYLHKDAFLL--ASQDLNEWPVIKPLPSYGR-------GRDAAAGRYTSLI 215
S L S+ + LL A++ WP I Y R R A T L
Sbjct: 570 SLFLKSNIIFEVTAGVRLLGTANKSTVHWPQI-----YRRNAGVLELSRAALLNAGTCLT 624
Query: 216 F-GTNLT-----------DVIVTGDNGTIDGQGALWW--QQFHKGKLKYTRPYLMEFMYT 261
F TN T ++ +TG GTIDG G W + G RP L+ M+
Sbjct: 625 FHSTNQTGDQCAEWSRYSNITITG-AGTIDGNGFSGWYLPPYLNGSFT-NRPMLIAPMWV 682
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
D + +S LTL + W V P + N+ + + II + PNTDG++PDSC N +E CYI
Sbjct: 683 DGLYLSDLTLTDPAFWTVAPAFCKNVHIHDLRII--TSGPNTDGVDPDSCQNVLVERCYI 740
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL----------TCISPYSAT--------- 362
+GDDC+A+KSG +A MPT + IR + T I Y+
Sbjct: 741 STGDDCIAIKSGRGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCT 800
Query: 363 ----IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
I++GSEMSGGI DV +++ T +GVR+KT +GRGG V+++ R M + ++ A
Sbjct: 801 TGHGISIGSEMSGGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTA 860
Query: 419 FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ +Y S ALP I ++++A+NV MA LE + + G+ N T+
Sbjct: 861 VLINQDYNSVT---CVGDALPNFSDILVQNVIANNVKMAFELECLQDNSCAGLRFENVTV 917
Query: 479 GMAAKHKKVPWTCADIGGMTSGVTPPPC 506
K +IG V+P PC
Sbjct: 918 TAFQNASKCAHVQPEIG---PNVSPVPC 942
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 185/391 (47%), Gaps = 46/391 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I ++G GD +T+A + A+++ ++ G +YVP+G ++TG + TL+L
Sbjct: 36 IREYGATGDSDALDTEAIQTALDECAE----SGGTVYVPSGTYVTGPLRVGDQTTLHLDA 91
Query: 179 DAFLLASQDLNEWPVIKPL----PSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
A L D +P ++ YG + + + +V +TG GTIDG
Sbjct: 92 GATLQFVGDYEAFPTVQSRWEGWNQYG---------FHPCLLVDDAENVSITG-RGTIDG 141
Query: 235 QGALWWQ------------------QFHKGKLKYT-------RPYLMEFMYTDNIQISSL 269
G WWQ +F + K RP L + ++N+ +S +
Sbjct: 142 GGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQISESENVSVSGV 201
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
TL NSP WN H VYS N+ + + I P +PN DGI+ DS RI D YI +GDD +
Sbjct: 202 TLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAIC 261
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+KSG + G G P Q+ + T + + + +GSEMSG ++DV + +T+ G
Sbjct: 262 IKSGKNAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEMSGDVRDVTVSNCTFTDTDRG 320
Query: 390 VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYR 447
VRIKTA RGG V+D+ + M + F + G Y D+ +P + P+++ +++
Sbjct: 321 VRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFT 380
Query: 448 DIVADNVSMAARLEGISGDPFTGICIANATI 478
+I A V A G+ F GI + I
Sbjct: 381 NITARQVETAGFFAGLPEQYFEGISFNDVQI 411
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 182/387 (47%), Gaps = 38/387 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I +FG SNT+A + A+++ + G + VP G ++TG + TL L
Sbjct: 33 IREFGAQSGSDDSNTEAIQTALDECAGT----GGTVSVPPGTYVTGPLRVGDRTTLQLEA 88
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A L D +P +K S G D L+ G + V +TG GTIDG G
Sbjct: 89 GATLRFVGDYEAFPTVK---SRWEGWDQVGFHPCLLVDGADT--VSITG-RGTIDGNGEY 142
Query: 239 WWQ------------------QFHKGKLKYT-------RPYLMEFMYTDNIQISSLTLLN 273
WWQ +F K RP L++ +N+ +S +TL N
Sbjct: 143 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 202
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SP WN H VYS N+ + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 203 SPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 262
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
D G G P Q+ + T + + + +GSEMSG ++DV + +T+ G+RIK
Sbjct: 263 KDAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEMSGDVRDVTVTNCTFTDTDRGIRIK 321
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVA 451
T GRGG V+D+ + M + F + G Y + D+ +P + P+++ +++ +I A
Sbjct: 322 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 381
Query: 452 DNVSMAARLEGISGDPFTGICIANATI 478
NV A G+ F GI + I
Sbjct: 382 RNVETAGFFAGLPERYFEGISFRDVRI 408
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 183/387 (47%), Gaps = 38/387 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I +FG SNT+A + A+++ + G + VP G ++TG + TL+L
Sbjct: 11 IREFGAQSGSDDSNTEAIQTALDECAGT----GGTVSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A L D +P ++ S G D L+ GT+ V +TG G IDG G
Sbjct: 67 GATLRFVGDYEAFPTVQ---SRWEGWDQIGFHPCLLVDGTDT--VSITG-QGAIDGNGEY 120
Query: 239 WWQ------------------QFHKGKLKYT-------RPYLMEFMYTDNIQISSLTLLN 273
WWQ +F K RP L++ +N+ +S +TL N
Sbjct: 121 WWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQIFDAENVTVSGVTLRN 180
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SP WN H VYS N+ + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
D G G P Q+ + T + + + +GSEMSG ++DV + +T+ G+RIK
Sbjct: 241 KDAEGREVGEPASQITVANCTVEAGHGG-VVIGSEMSGDVRDVTVSNCTFTDTDRGIRIK 299
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVA 451
T GRGG V+D+ + M + F + G Y + D+ +P + P+++ +++ +I A
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPTGEGTPLVRNVSFSNITA 359
Query: 452 DNVSMAARLEGISGDPFTGICIANATI 478
NV A G+ F GI + I
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 212/428 (49%), Gaps = 63/428 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI D+G VGDG T NT+A KDAI + GG ++ +PAGK+LTG +L S+ L+L
Sbjct: 50 SIMDYGAVGDGTTDNTQAIKDAIQACVEA---GGGKVVIPAGKFLTGPIHLKSNVNLHLE 106
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K++ ++ ++D + PV++ SY Y+ LI+ ++ VTG +GT +GQ
Sbjct: 107 KNSEVIFTKDKQAYLPVVR--TSY---EGVELMNYSPLIYAYQQKNIAVTG-SGTFNGQA 160
Query: 237 AL--WW------QQFHK------------------------------GKLKYTRPYLMEF 258
WW + HK G+ + RP E
Sbjct: 161 GKENWWPWSGAERYGHKKGDPHQRDSINLPRLRKMNEDATPVSERIFGEGHHLRPTFFEP 220
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
++N+ I +T +N+P W +HP+ +N+ V G+ +I+ PN DG NP+ N I +
Sbjct: 221 FESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPEYSKNVHITN 278
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI-SPYSATIALGSEMSGGIQDVR 377
C +GDDC+A+KSG ++ G G+ ++ +V+ CI + +GSE+S G+++V
Sbjct: 279 CVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVE--NCIMKDGHGGVVMGSEISAGVRNVY 336
Query: 378 AEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP 435
+ K + N + +RIKT RGG+V++++V+ + + +K AF Y + DN +
Sbjct: 337 VRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYAIYDNQ-EG 395
Query: 436 KALPVIQGINYRDI-VADNVSMAARLEGISGDPFTGICIANATIGMA------AKHKKVP 488
+ +P I+ I+ ++ V D ++G +P + N TI A + +
Sbjct: 396 EHIPTIKNIHIENVTVEDGGKYGILIQGREENPVKNVTFKNVTIKKAEMPMRVENSEPIE 455
Query: 489 WTCADIGG 496
+T IGG
Sbjct: 456 FTNTTIGG 463
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 189/366 (51%), Gaps = 33/366 (9%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A ++ I++L Q GG ++ AG++ TG+ L S+ L+L A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGK--LKY 250
V+ R Y S ++ N ++ VTG G +DGQG WW+ F + + L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
RP L+ F I + + L++SPSW V+P+ N+ + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPES 188
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPY----SATIALG 366
C N RI +C+I GDDC+A+KSG ++ +++ +T ++ + + LG
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED-------TKERVACENITIVNCHMLHGHGAVVLG 241
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY- 425
SEMSG I++V + +T+ GVR+K+ GRGG ++DI V + M + F + Y
Sbjct: 242 SEMSGDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYF 301
Query: 426 -GSHADNHY--DPKALPVIQG------INYRDIVADNVSMAA-RLEGISGDPFTGICIAN 475
G Y D P+ + I++ +I A NV AA + G++ + I +
Sbjct: 302 CGPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQD 361
Query: 476 ATIGMA 481
+ MA
Sbjct: 362 IAVSMA 367
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 189/366 (51%), Gaps = 33/366 (9%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A ++ I++L Q GG ++ AG++ TG+ L S+ L+L A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGK--LKY 250
V+ R Y S ++ N ++ VTG G +DGQG WW+ F + + L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
RP L+ F I + + L++SPSW V+P+ N+ + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPES 188
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPY----SATIALG 366
C N RI +C+I GDDC+A+KSG ++ +++ +T ++ + + LG
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED-------TKERVACENITIVNCHMLHGHGAVVLG 241
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY- 425
SEMSG I++V + +T+ G+R+K+ GRGG ++DI V + M + F + Y
Sbjct: 242 SEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYF 301
Query: 426 -GSHADNHY--DPKALPVIQG------INYRDIVADNVSMAA-RLEGISGDPFTGICIAN 475
G Y D P+ + I++ +I A NV AA + G++ + I +
Sbjct: 302 CGPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQD 361
Query: 476 ATIGMA 481
+ MA
Sbjct: 362 IAVSMA 367
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 204/406 (50%), Gaps = 62/406 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG V DGKT NT AF+ AI ++ +GG ++ VP GK+LTG+ +L ++ L+L
Sbjct: 59 NINDFGAVADGKTLNTAAFEKAIQTCTE---NGGGKVLVPNGKYLTGAIHLENNVNLHLE 115
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
A +L S + ++P++ + Y+ LI+ N T+V +TG G ++GQ
Sbjct: 116 DKAEILFSLNPKDYPIV-----HTSWEGTELMNYSPLIYAKNKTNVAITGK-GILNGQAD 169
Query: 237 -ALWW------------------------------------QQFHKGKLKYTRPYLMEFM 259
WW +Q G+ +Y RP +EF
Sbjct: 170 STNWWIWSGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVEQRIFGEGRYLRPNFIEFF 229
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ + + +T++NSP W +HP+ ++N+++ G+T+ + PN DG +P+ N I++C
Sbjct: 230 ECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQNIVIKNC 287
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+GDDC+A+K+G D G +P+K ++++ I + + +GSE+S G+ +V E
Sbjct: 288 TFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHGG-VVIGSEISAGVNNVFVE 346
Query: 380 D--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW---MTGN-YGSHADNHY 433
+ + + N + +RIKT RGG +++++VR + + T+K M N YGS N
Sbjct: 347 NCVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMFYNVYGSQTGNF- 405
Query: 434 DPKALPVIQGINYRDI-VADNVSMAARLEGISGDPFTGICIANATI 478
+PVI+ IN ++ V + + EG P I + N I
Sbjct: 406 ----IPVIRNINLENVNVKNGGKYSIWAEGYKESPVENITLKNVKI 447
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 201/419 (47%), Gaps = 57/419 (13%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFN 167
A++ + + ++ + G G S T + INQ + + SS+GG +Y PAG +LT + +
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCT----ELINQTIEKASSEGGGTIYFPAGVYLTATIH 69
Query: 168 LISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+ S+ TLY+ A L S ++ P +K R + LI+ + ++ +T
Sbjct: 70 MKSNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTIT 124
Query: 227 GDNGTIDGQGALWWQ---------QFHKGKL----------------------------- 248
G GT++G G WW + + GKL
Sbjct: 125 G-RGTLNGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLER 183
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP---NTDG 305
+ RP ++F +N+ I ++ ++NSP W ++P + N+ V G+TI P P NTDG
Sbjct: 184 RMFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDG 243
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
INP SC N RI DC+I GDDC+ +KSG D G YG + + I +S + + +
Sbjct: 244 INPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGG-VVI 302
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGN 424
GSEMSGG++ V + T+SG+R+K++ GRGG V+++ V + M ++ AF
Sbjct: 303 GSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLF 362
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
Y + + PV + I+ +I ++ ++GI P G+ +N I M A+
Sbjct: 363 YDKESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSN--INMKAE 419
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 201/419 (47%), Gaps = 57/419 (13%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFN 167
A++ + + ++ + G G S T + INQ + + SS+GG +Y PAG +LT + +
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCT----ELINQTIEKASSEGGGTIYFPAGVYLTATIH 69
Query: 168 LISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+ S+ TLY+ A L S ++ P +K R + LI+ + ++ +T
Sbjct: 70 MKSNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTIT 124
Query: 227 GDNGTIDGQGALWWQ---------QFHKGKL----------------------------- 248
G GT++G G WW + + GKL
Sbjct: 125 G-RGTLNGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLER 183
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP---NTDG 305
+ RP ++F +N+ I ++ ++NSP W ++P + N+ V G+TI P P NTDG
Sbjct: 184 RMFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDG 243
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
INP SC N RI DC+I GDDC+ +KSG D G YG + + I +S + + +
Sbjct: 244 INPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGG-VVI 302
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGN 424
GSEMSGG++ V + T+SG+R+K++ GRGG V+++ V + M ++ AF
Sbjct: 303 GSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLF 362
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
Y + + PV + I+ +I ++ ++GI P G+ +N I M A+
Sbjct: 363 YDKESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSN--INMKAE 419
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 200/419 (47%), Gaps = 57/419 (13%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFN 167
A++ + + ++ + G G S T + INQ + + SS+GG +Y PAG +LT + +
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCT----ELINQTIEKASSEGGGTIYFPAGVYLTATIH 69
Query: 168 LISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+ S+ TLY+ A L S ++ P +K R + LI+ + ++ +T
Sbjct: 70 MKSNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTIT 124
Query: 227 GDNGTIDGQGALWWQ---------QFHKGKL----------------------------- 248
G GT+DG G WW + + GKL
Sbjct: 125 G-RGTLDGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLER 183
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP---NTDG 305
+ RP ++F +N+ I ++ ++NSP W ++P + N+ V G+TI P P NTDG
Sbjct: 184 RMFRPPFIQFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDG 243
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
INP SC N RI DC+I GDDC+ +KSG D G YG + + I +S + + +
Sbjct: 244 INPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGG-VVI 302
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGN 424
GSEMSGG++ V + +SG+R+K++ GRGG V+++ V + M ++ AF
Sbjct: 303 GSEMSGGVRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLF 362
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
Y + + PV + I+ +I ++ ++GI P G+ +N I M A+
Sbjct: 363 YDKESKMEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSN--INMKAE 419
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 182/338 (53%), Gaps = 35/338 (10%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ ++ + G G S T AF +AI+ L+ + GG L VPAG+WLTG L SH L+
Sbjct: 18 ATNLLEHGAQEGGIQSCTTAFANAIDTLA---AQGGGTLTVPAGRWLTGPICLRSHIRLH 74
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
L A ++ S++ ++ +P P + L++ + T + +TG GT DGQ
Sbjct: 75 LETGAHVVFSREHADY---QP-PVLAHRAGCWVMNFHPLLYARDATHIAITG-RGTFDGQ 129
Query: 236 GALWWQ-----------------------QFHKGKLKYTRPYLMEFMYTDNIQISSLTLL 272
G WW+ + RP ++EF+ ++ I ++TL
Sbjct: 130 GDAWWEWKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNMLEFINCRDVLIENVTLR 189
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP++ VHPV N+ ++G++I+ PN DGI+P+ C N IEDC + +GDDC+ +KS
Sbjct: 190 DSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVLIEDCLVDTGDDCICLKS 247
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D+ G A PT+ +++RR+ + I LGSE+S GI++V ED TE G+RI
Sbjct: 248 GRDQDGWAENRPTENVIVRRIRTRRGHGG-IVLGSELSSGIRNVLVEDCDFSGTERGIRI 306
Query: 393 KTAVGRGGYVKDIYVRGMTM-HTMKWAFWMTGNYGSHA 429
K+A GRGG+V++I++R + M + A + +YGS A
Sbjct: 307 KSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVA 344
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 166/347 (47%), Gaps = 62/347 (17%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+T++GGVGDG T NT+ F++AI LS + GG L VP G WLTG L SH L+L
Sbjct: 37 SLTEYGGVGDGITLNTECFREAIEHLS---AKGGGTLVVPTGIWLTGPIRLKSHIELHLE 93
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K+A L+ + D +P + + + S I N +D+ +TG+ G IDG G
Sbjct: 94 KNALLIFTSDFWSYPSRSTFFT-----EVFYRQLQSPISAYNESDIAITGE-GVIDGSGQ 147
Query: 238 LW------------WQQFHKG--------------------------------------- 246
W W+ +
Sbjct: 148 DWRPVRKNKVTVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYARREENIIHKYNTPDEWV 207
Query: 247 KLK-YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+LK Y RP LM + + + + +T NSP WN+HP +++V G+ + P S N DG
Sbjct: 208 RLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNGDG 267
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
++ +SC N + GDD V +KSG +E G GMP K +V+ T + + +
Sbjct: 268 LDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTVFHGHGGFV-V 326
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
GSEMSGG+ + + K +NT++G+R K+ RGG+V DIY++ + M
Sbjct: 327 GSEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYM 373
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 179/385 (46%), Gaps = 66/385 (17%)
Query: 126 GDGKTSN-TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDA---F 181
G K N T++ K AI +DGG ++ +P G++ T + +L+S+ L+L K A F
Sbjct: 558 GAQKNQNITESLKAAIQACH---TDGGGRVVIPKGEYYTAAIHLLSNVNLHLEKGAVLRF 614
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--W 239
L + +D PV+ R + LI+ T+V +TG GT+DGQ + W
Sbjct: 615 LTSPEDY--LPVV-----VSRWEGVDCRTLSPLIYANGQTNVAITG-AGTLDGQASRDNW 666
Query: 240 WQ--------------QFHKGKLKYT------------------RPYLMEFMYTDNIQIS 267
W + K KL + RP ++F + + +
Sbjct: 667 WSWKGRKSSSEQNTEAKVGKDKLLWMEQNRISLDERIFSVNDKLRPPFIQFYRCNRVLVE 726
Query: 268 SLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 327
+T++ SP W +HP+ S N++V+G+ + PN DG +P+SC N IE C +GDDC
Sbjct: 727 GVTIIRSPFWMLHPLLSKNVIVRGVKFDS--HGPNNDGCDPESCENVLIESCDFNNGDDC 784
Query: 328 VAVKSGWDEYGIAYGMPTKQLVIRRLTCI-SPYSATIALGSEMSGGIQDVRAED--IKAI 384
VA+KSG + G + +P++ +++R CI A +A+GSE+SG DV D + +
Sbjct: 785 VAIKSGKNNDGRTWNLPSRNIIVR--NCIMRDGHAGVAVGSEISGSCYDVWVRDCVMDSP 842
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-FWMTGNYGSHADNHYDPKALPVIQG 443
+ + +RIK+ RGG V Y R + + K A + Y Y+P
Sbjct: 843 SMDRPLRIKSNALRGGVVDGFYARDIRIGECKQAVLRLELQYERVQSGPYNPV------- 895
Query: 444 INYRDIVADNVSMAARLEGISGDPF 468
+R+I +NV+ GI + F
Sbjct: 896 --FRNIYLENVTCKKSSYGILIEGF 918
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 189/366 (51%), Gaps = 33/366 (9%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A ++ I++L Q GG ++ AG++ TG+ L S+ L+L A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGK--LKY 250
V+ R Y S ++ N ++ VTG G +DGQG WW+ F + + L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
RP L+ F I + + L++SPSW V+P+ ++ + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPES 188
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPY----SATIALG 366
C N RI +C+I GDDC+A+KSG ++ +++ +T ++ + + LG
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED-------TKERVACENITIVNCHMLHGHGAVVLG 241
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY- 425
SEMSG I++V + +T+ G+R+K+ GRGG ++DI V + M + F + Y
Sbjct: 242 SEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYF 301
Query: 426 -GSHADNHY--DPKALPVIQG------INYRDIVADNVSMAA-RLEGISGDPFTGICIAN 475
G Y D P+ + I++ +I A NV AA + G++ + I +
Sbjct: 302 CGPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQD 361
Query: 476 ATIGMA 481
+ MA
Sbjct: 362 IAVSMA 367
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 200/419 (47%), Gaps = 57/419 (13%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFN 167
A++ + + ++ + G G S T + INQ + + SS+GG +Y PAG +LT +
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCT----ELINQTIEKASSEGGGTIYFPAGVYLTATIY 69
Query: 168 LISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+ ++ TLY+ A L S ++ P +K R + LI+ + ++ +T
Sbjct: 70 MKNNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTIT 124
Query: 227 GDNGTIDGQGALWWQ---------QFHKGKL----------------------------- 248
G GT+DG G WW + + GKL
Sbjct: 125 G-RGTLDGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLER 183
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP---NTDG 305
+ RP ++F +N+ I ++ ++NSP W ++P + N+ V G+TI P P NTDG
Sbjct: 184 RMFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDG 243
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
INP SC N RI DC+I GDDC+ +KSG D G YG + + I +S + + +
Sbjct: 244 INPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGG-VVI 302
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGN 424
GSEMSGG++ V + T+SG+R+K++ GRGG V+++ V + M ++ AF
Sbjct: 303 GSEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLF 362
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
Y + + PV + I+ +I ++ ++GI P G+ +N I M A+
Sbjct: 363 YDKESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSN--INMKAE 419
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 189/366 (51%), Gaps = 33/366 (9%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A ++ I++L Q GG ++ AG++ TG+ L S+ L+L A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGK--LKY 250
V+ R Y S ++ N ++ VTG G +DGQG WW+ F + + L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
RP L+ F I + + L++SPSW V+P+ ++ + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPES 188
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPY----SATIALG 366
C N RI +C+I GDDC+A+KSG ++ +++ +T ++ + + LG
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED-------TKERVACENITIVNCHMLHGHGAVVLG 241
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY- 425
SEMSG I++V + +T+ G+R+K+ GRGG ++DI V + M + F + Y
Sbjct: 242 SEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYF 301
Query: 426 -GSHADNHY--DPKALPVIQG------INYRDIVADNVSMAA-RLEGISGDPFTGICIAN 475
G Y D P+ + I++ +I A NV AA + G++ + I +
Sbjct: 302 CGPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQD 361
Query: 476 ATIGMA 481
+ MA
Sbjct: 362 IAVSMA 367
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 212/437 (48%), Gaps = 63/437 (14%)
Query: 84 IVVALLSQRGAESRKARRLDSF--EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAIN 141
I +A L+++G + ++A +D + A ++ +G G+ +T A + AI+
Sbjct: 19 IGLARLAKQGKKDKEANGMDHVLKQIKAPMFPDREFNVIHYGADEKGEVLSTNAIQSAID 78
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSY 200
+ G ++ +P G +LTG+ L SH L+LH++A++ SQD ++ P++
Sbjct: 79 DAHRLK---GGRVVIPKGTFLTGALELKSHVELHLHENAYVTFSQDPRDYLPLV-----L 130
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW------------------ 240
R Y+ LI+ + ++ +TG +GT+DG+G WW
Sbjct: 131 TRYEGIELYNYSPLIYAHHAENMAITG-SGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQL 189
Query: 241 -----------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
++ G+ Y R ++ NI I +T+ +SP W +HPV N++V
Sbjct: 190 LFEMAEKRIPVEERVFGEGHYLRSSFIQPYQCQNILIEGVTVKDSPMWQIHPVLCENVIV 249
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 349
+G+ II PNTDG+NP+SC N IEDCY +GDDC+A+KSG +E G G+P++ +V
Sbjct: 250 RGVNIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIV 307
Query: 350 IRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYV 407
IRR + + +GSE+SGG++ V AED + + N + +RIKT RGG ++ IY
Sbjct: 308 IRRNEMRDGHGG-VTIGSEISGGVRYVYAEDNIMDSPNLDRALRIKTNSVRGGTIEHIYF 366
Query: 408 RGMTMHTMKWA------FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLE 461
+ T+ ++K + G+ G H PV++ I + + ++
Sbjct: 367 KNNTVKSLKHEVVCIDMMYEEGDAGPHK---------PVVRHIEVEGLKSSGGRYGVKIA 417
Query: 462 GISGDPFTGICIANATI 478
P T + + I
Sbjct: 418 AYPHSPVTHFKMKDCVI 434
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 206/411 (50%), Gaps = 62/411 (15%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S +I D+G V DG T NT AF+ AI + ++ +GG ++ VP GK+LTG+ +L S+ L+
Sbjct: 57 SYNIKDYGAVADGTTLNTGAFEKAIKECAE---NGGGKVIVPNGKYLTGAIHLESNVNLH 113
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
L +A +L S + ++P++ + Y+ L++ N T+V +TG GT++GQ
Sbjct: 114 LDDNAEILFSTNPKDYPIV-----HTSFEGTEVMNYSPLVYAKNKTNVAITGK-GTLNGQ 167
Query: 236 GA-----LW-------WQQFHK--------------------------GKLKYTRPYLME 257
+W WQ+ + G+ +Y RP +E
Sbjct: 168 ANSSNWWVWSGGKSYGWQKGNPSQNDPANREVLVDMAEKGVPVTERVFGEGRYLRPNFIE 227
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
F + + I + ++N+P W +HP+ S+NI++ G+T+ + PN DG +P+ N I+
Sbjct: 228 FFECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTVNS--HGPNNDGCDPEYSQNIIIK 285
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
+C +GDDC+A+KSG D G +P+K ++++ I + + +GSE+S G+ +V
Sbjct: 286 NCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMIDGHGG-VVIGSEISAGVNNVF 344
Query: 378 AED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW---MTGN-YGSHADN 431
E+ + + N + +RIKT RGG ++D+YVR + + T+K M N YGS +
Sbjct: 345 VENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNVYGSQTGS 404
Query: 432 HYDPKALPVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMA 481
+PVI+ I+ ++ EG P + + N I A
Sbjct: 405 F-----IPVIRNISLENVTVKKAGKYGVWAEGYKESPVENVTLKNVVIEKA 450
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 213/453 (47%), Gaps = 46/453 (10%)
Query: 105 FEYNAISCRAHSA---SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW 161
F + C A SA S D G K S+ KA K ++ ++ GG +Y PAGK+
Sbjct: 5 FLIAVVGCFAISAGAQSYFDVTKYGAKKNSSIKATKAIEKTITAAAAAGGGTVYFPAGKY 64
Query: 162 LTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNL 220
LTG +L S+ T+ + A L S D +++ P+++ S G D + ++ L + +
Sbjct: 65 LTGPIHLKSNITILIDAGAELHFSDDFDDYLPMVE---SRYEGVDVTS--FSPLFYANGV 119
Query: 221 TDVIVTGDNGTIDGQGALWW---QQFHKG--------------------------KLKYT 251
++ +TG G IDG G WW + + +G K +
Sbjct: 120 ENIAITG-RGVIDGHGKKWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPRQMKRGFL 178
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP-VTSPNTDGINPDS 310
RP ++F+++ NI I + + NSP W ++P + N+ V +TI P +PNTDGINP+S
Sbjct: 179 RPPFIQFLHSKNILIEGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPES 238
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C+N I DC+I GDDC+ +KSG D G + P + I T + + + +GSEMS
Sbjct: 239 CSNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCTMLRGHGGVV-IGSEMS 297
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHA 429
GG++ + + T+ G+RIKTA GRGG V+DI V + M + + A + Y A
Sbjct: 298 GGVKKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKGA 357
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
+ + P + I +I A + A + GI P +GI + + A+ V
Sbjct: 358 EEPVSERT-PTFRNIRLSNITA-YTNQALLINGIREMPVSGISLNDVV--FEARQGIVLK 413
Query: 490 TCADIGGMTSGVTPPPCELLPDQGPEKIRACDF 522
ADI + P L E++ +F
Sbjct: 414 NAADISLNNVKIRIPAGTALKADQVERLDVNNF 446
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 197/401 (49%), Gaps = 52/401 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ +G D T+A K AI+ S+ GG +Y PAGK+LTG+ +L S+ T+++
Sbjct: 42 NVLKYGARNDSSKLATQAIKKAIDAASKA---GGGTVYFPAGKYLTGAIHLKSNITIFID 98
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L S + +++ P++K S G D + ++ L + ++ +TG G IDG G
Sbjct: 99 AGAELHFSDNFDDYLPMVK---SRYEGVDVTS--FSPLFYAYKAENIAITG-RGIIDGHG 152
Query: 237 ALWWQQFHKG------------------------------KLKYTRPYLMEFMYTDNIQI 266
WW F +G K + RP ++ MY N+ I
Sbjct: 153 KKWW-DFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGFLRPPFIQTMYCKNVFI 211
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGD 325
+T+ NSP W V+P + N+ + +TI P + +PNTDGINP+SC N I +C+I GD
Sbjct: 212 EGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNNVHISNCHISVGD 271
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+ +KSG D G P + I T +S + + +GSEMSG ++ + +
Sbjct: 272 DCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHGGVV-IGSEMSGDVRKISISNCVFDG 330
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMK-WAFWMTGNYGSHADNHYDP--KALPVIQ 442
T+ G+RIK+A GRGG V++I V + M +K A + Y A +P + P +
Sbjct: 331 TDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQAIVLDLQY---AKTTLEPVSERTPRFR 387
Query: 443 GINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
I++ +I V+ AA L G+ P I + I M AK
Sbjct: 388 NIHFSNITGQ-VNEAAYLNGLEEMPIENISFND--INMEAK 425
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 55/364 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG VGDG T NT+AFK AI ++GG ++ VP GK+LTG L S+ L+L
Sbjct: 70 ITDFGAVGDGLTKNTEAFKKAIEACH---NNGGGRVVVPYGKFLTGGIYLKSNVNLHLAD 126
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA- 237
A ++ S+D +++P++ + R Y S I+ ++ VTG NG +DG
Sbjct: 127 SATIVFSRDSSDYPIV-----FTRWEGMECMNYASFIYAYGEENIAVTG-NGILDGNANN 180
Query: 238 -LWW-------------------------QQFHK---------GKLKYTRPYLMEFMYTD 262
WW + H+ G Y RP ++
Sbjct: 181 DYWWWWCGAKKYGWREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQCK 240
Query: 263 NIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIV 322
N+ I+ + L+NSP WN++PV N+L++ + +I+ PN DG +P++C N I DCY
Sbjct: 241 NVWIADVKLINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPEACKNVWIRDCYFD 298
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA--ED 380
+GDDC+A+KSG DE G G P + +I + + +GSE++GG +++ A +
Sbjct: 299 TGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKDGHGGVV-IGSEIAGGAKNIYAINCE 357
Query: 381 IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPV 440
+ + N + +RIKT+ RGG +++++++ + + T K A + NH +P
Sbjct: 358 MDSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEKPGNH-----IPT 412
Query: 441 IQGI 444
I+ I
Sbjct: 413 IRNI 416
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 194/417 (46%), Gaps = 60/417 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T G G +T AF++A LS+ + GG +L+VP G +L G L SH + +
Sbjct: 5 VTTLGADPTGLRESTDAFREA---LSRIEAAGGGRLHVPPGDYLVGPLRLCSHLEFEVAR 61
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A + QD + +PV+ + R Y ++F DV ++G G IDGQGA
Sbjct: 62 GARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMLFVEGAEDVRISG-GGVIDGQGAS 115
Query: 239 WWQ---QFHKGKL------------------------------KYTRPYLMEFMYTDNIQ 265
WW+ + +G+L + RP L++ + +
Sbjct: 116 WWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVV 175
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
I + L NS WN H +YS + ++G++ P +PNTDG+N DS N RIEDC GD
Sbjct: 176 IEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGD 235
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAI 384
DC+ +KSG DE G G PT+ +VIR CI I GSE++GG+++V
Sbjct: 236 DCLGLKSGIDEDGRRVGRPTEHVVIR--GCIMRRGHGGIVCGSEIAGGVRNVVVTGCIFQ 293
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--------- 435
+T+ G+RIK+ GRGG+V+++ + + M + + Y D +
Sbjct: 294 DTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGIDPGEEEIVSRLASLL 353
Query: 436 -----KALPVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMAAKHKK 486
+ P ++ I+ ++A V S A L G+ P G+ +++ + M + ++
Sbjct: 354 PLPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLSDYRVFMDEEGQE 410
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 47/392 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I ++G + D T A + A+++ ++ G +YVPAG++ TG + TL+L
Sbjct: 11 IREYGAISDSDDPATDAIQTALDECAET----GGTVYVPAGRFRTGPLRIGDRTTLHLDP 66
Query: 179 DAFLLASQDLNEWPVIKPL----PSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
A L D + +P ++ YG + ++ T+ +V ++G GTIDG
Sbjct: 67 GATLTFVGDYDAFPTVESRWEGWNQYG---------FHPCLWVTDAENVEISG-RGTIDG 116
Query: 235 QGALWWQ------------------QFHKGKLKYT-------RPYLMEFMYTDNIQISSL 269
G WWQ +F+ K RP L + ++N+ +S +
Sbjct: 117 NGQYWWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGV 176
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
TL NSP WN H VYS N+ + + ++ P +PN DGI+ DS RI D YI +GDD +
Sbjct: 177 TLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAI 236
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTES 388
+KSG + G G P Q+ + T + + + +GSEMSG ++DV + +T+
Sbjct: 237 CIKSGKNAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEMSGDVRDVAVTNCTFTDTDR 295
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINY 446
GVRIKT RGG V+D+ + M + F + G Y + D+ +P + P+++ + +
Sbjct: 296 GVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEPVDEGTPMVRNVTF 355
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATI 478
+I A NV A G+ F GI N I
Sbjct: 356 SNITARNVETAGFFAGLPEQYFEGIEFDNVRI 387
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 209/441 (47%), Gaps = 43/441 (9%)
Query: 70 SRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGK 129
S+ + + L+P + + ES K + F A I +FG VGDGK
Sbjct: 42 SKNINTIYNLIPDKEYIIFVKNSEGESNKLKVKTEFA-------AFILDIREFGAVGDGK 94
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
T NT A + AI S+ + + + G +LTG L S+ T+ + +A L A ++
Sbjct: 95 TVNTFAIQTAI-----LSAPENSIIEIRDGNYLTGPVLLKSNITINIAGNARLTALKERE 149
Query: 190 EWPVIKPLPS----------YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG--A 237
+P+ LP+ G A + SL G ++ +V +TG+ GTIDG
Sbjct: 150 MYPI---LPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNVNITGE-GTIDGNSDRE 205
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW+ ++ + RP + NI I + + NSPSW +HPV+SSN+ + I P
Sbjct: 206 TWWKDAKIKRISW-RPRTIFLTDCSNINIVGINIENSPSWTLHPVFSSNLGFFDMKIRNP 264
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SPNTDGI+P+SC N I GDDC+A+KSG + G G+P++ + I C
Sbjct: 265 KDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSENINIE--NCHM 322
Query: 358 PYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
+ + +GSEMSGGI++V ++ NT+ G+RIKT GRGG + I+ + M +
Sbjct: 323 EFGHGGVVIGSEMSGGIKNVNIKNCLFENTDRGLRIKTRRGRGGIIDGIHAENIVMDKVL 382
Query: 417 WAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVADNVSM-AARLEGISG 465
F + Y +D + + PVI+ I ++++V N + A + G+
Sbjct: 383 TPFVINEFYYCDSDGKTEYVWNKDKLEITEETPVIKNITFKNMVCKNSEVCAGFMYGLPE 442
Query: 466 DPFTGICIANATIGMAAKHKK 486
+ + N TI A ++
Sbjct: 443 RKIERVVLENLTIDFAEDPRR 463
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ ITDFGG+GDG NT+AF AI+ LS + GG L VPAG WLTG S+ L
Sbjct: 45 NKVKITDFGGIGDGIYLNTQAFSKAIDALS---AKGGGMLTVPAGIWLTGPIQFKSNINL 101
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L A +L S D N +P+++ + G D R S I+G NLT++ +TG +G IDG
Sbjct: 102 HLEDRAIILFSPDKNLYPIVE---TSFEGLDTR--RCQSPIWGKNLTNIAITG-SGAIDG 155
Query: 235 QGALW------------W--------------------QQFHKGKLK------------- 249
G W W Q H +
Sbjct: 156 NGQFWRPLKKQKVTESFWKKTVSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKTDEE 215
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ F N+ + + NSP+WN+HP+ N+++ GI + P + N
Sbjct: 216 WQSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNG 275
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N + + GDD + +KSG +E G GMP + +++ T + +
Sbjct: 276 DGLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCTVFKGHGGFV 335
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG++++ + + + T+ G+R K+ GRGG V++I++ ++M
Sbjct: 336 -VGSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISM 383
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 215/469 (45%), Gaps = 82/469 (17%)
Query: 82 LLIVVALLSQRGAESRKARRLDS--FEYNAISCRA---HSASITDFGGVGDGKTSNTKAF 136
LL ++ +S AE+R + FE AI + SITDFGG+ DG T NT AF
Sbjct: 11 LLYILLSVSTAKAENRYNHLYKNLPFEMPAIQRPVFPDNKVSITDFGGIPDGITLNTDAF 70
Query: 137 KDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP 196
A++ LS + GG L+VP+G W TG S+ L+L K A +L S D N +P++
Sbjct: 71 AKAMDALS---NKGGGTLFVPSGVWYTGPIVFKSNINLHLEKGALILFSADFNLYPLVN- 126
Query: 197 LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------------WQQF- 243
+ G D R S I G NL ++ +TG+ G+I+G G W W++
Sbjct: 127 --TVFEGLDTR--RCQSPISGRNLENIAITGE-GSINGSGEAWRPLKKSKVTEIHWKKVI 181
Query: 244 --------------HKGKLK------------------------YTRPYLMEFMYTDNIQ 265
KG LK + RP ++ F+ N+
Sbjct: 182 NSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDLTEAEWMEIKDFLRPVMVSFIECKNVL 241
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + NSPSWN+HP+ N+++ + + P + N DG++ +SC N+ I + GD
Sbjct: 242 LEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGLDLESCKNSIIVNSIFDVGD 301
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
D + +KSG DE G PT+ ++I + + +GSEMSG ++++ + + +
Sbjct: 302 DAICIKSGKDEDGRRRNRPTENVLIDNCKVFQGHGGFV-VGSEMSGSVRNILVSNCQFLG 360
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMK-WAFWMTGNYG--SHADNHYDPKALPV-- 440
T+ G+R K+ GRGG V++IY+R + M + +F YG S ++ D +PV
Sbjct: 361 TDVGLRFKSCRGRGGVVENIYIRDINMFDIATESFLFDLYYGGKSAVESLEDGDTIPVTS 420
Query: 441 -----------IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ I +++V+ N A G+ I + + TI
Sbjct: 421 TILAVDETTPAFKNIYVKNLVSRNARRAMFFNGLPEMKIENINVEDVTI 469
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 195/392 (49%), Gaps = 32/392 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG G+G+ +T A + AI S ++ VPAG++ S L S TL L
Sbjct: 87 NVKDFGAYGNGEHDDTNAIQCAI-----MSCPKAGRILVPAGEYKISSIFLKSDITLDLA 141
Query: 178 KDAFLLASQDLNEWPVIK-PLPSYGRGRDAAAGR--------YTSLIFGTNLTDVIVTGD 228
K A L A + ++P++ + SY + G +++++ G N+ +V++TG+
Sbjct: 142 KGAVLSAFTEREKFPILPGVIESYDETDEYNLGSWEGNPLDCFSAIVCGINVENVVITGE 201
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
GTIDG WW + + RP L + N+ + +T+ NSPSW +HP +S +
Sbjct: 202 -GTIDGNAGFDNWWYNVKVRNIAW-RPRLFFINHCRNVTMHGITVQNSPSWTLHPYFSDH 259
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + I P S NTDG++P+SCT+ R+ YI GDDC+A+KSG G + +PT
Sbjct: 260 LKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMGRKHKIPTS 319
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
+ +R+ C+ + +GSE++ G++DV D +NT+ G+R+KT GRG + D
Sbjct: 320 DMEVRQ-CCMRDGHGAVTVGSEIAAGVKDVHIRDCIFMNTDRGLRVKTRRGRGRDSVLDD 378
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIVADNV 454
I +TM + F + Y D + KALPV I+ + ++DI A N
Sbjct: 379 ISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSKALPVDDRTPAIKRLTFKDIKATNC 438
Query: 455 SMA-ARLEGISGDPFTGICIANATIGMAAKHK 485
+A A + G+ + N I A K
Sbjct: 439 HVAGAYICGLPESKIERLTFENVDISYADDAK 470
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 183/367 (49%), Gaps = 31/367 (8%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ ++ DFG GDG +T + AI S +++ +P G + S L H T+
Sbjct: 79 YTLNVRDFGAKGDGVQDDTTYIQAAI-----MSCPRNSRVLIPEGTYRVTSLFLKDHLTM 133
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPS---------YGRGRDAAAGRYTSLIFGTNLTDVIV 225
L K A L A + + +++ G A + ++ G + DV +
Sbjct: 134 ELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTI 193
Query: 226 TGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
G+ GTIDG + WW + + RP ++ +++ I+ +T+ NSPSWN+HP +
Sbjct: 194 CGE-GTIDGNASWENWWLDAKEVR-GAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYF 251
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
S++ G+T++ P SPNTDG+NP+SC + I C GDDC+AVK+G G Y +
Sbjct: 252 CSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKV 311
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GY 401
P+ + IR+ C+ +I LGSEM+ GI++++A +NT+ G+RIKT GRG
Sbjct: 312 PSSNIRIRQ-CCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRGKDAV 370
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNH------YDPKAL----PVIQGINYRDIVA 451
+ I + M ++ F + Y D H +P A+ P I+ + +R+I A
Sbjct: 371 IDGILFEDIRMDSVLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKELCFRNIQA 430
Query: 452 DNVSMAA 458
N +AA
Sbjct: 431 KNCHVAA 437
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 207/425 (48%), Gaps = 63/425 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ D+G VGDG T ++KA +DAI+ + G + +PAG + T L S TL +
Sbjct: 146 NVKDYGAVGDGVTKDSKAIQDAIDACTP-----GGVVVIPAGTYYTAPLKLKSDMTLNIE 200
Query: 178 KDAFLLASQDLNEWPVI---------------------KPLPSYGRG---------RDAA 207
K A +LAS+D++++ +I K L G G ++AA
Sbjct: 201 KGATILASRDVSDYKIIDSRWEGTSFKSYMSIITAIDAKNLNIIGEGTIDGNAGPIKEAA 260
Query: 208 AGRYTSLIFGTNLTDVIVTGD--------NG----TIDGQGALWWQ--QFHKGKLKYTRP 253
AG T +G + V V+G+ NG ++ LWW + + RP
Sbjct: 261 AGE-TEDAYGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPKATDPTKQTARP 319
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI---IAPVTSPNTDGINPDS 310
++ + D + I + + NSPSW +HP+YS NI + + + +PV SPNTDG++PDS
Sbjct: 320 RTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDGLDPDS 379
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
N + + GDDC+A+KSG D G G+P+ + IR + + + LGSEMS
Sbjct: 380 VDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGHGG-VTLGSEMS 438
Query: 371 GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHA 429
GGI ++ +D +T GVR+KT GRGG ++D+ + M + AF + NY S+
Sbjct: 439 GGINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNYSSNG 498
Query: 430 D----NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI----GMA 481
+ P I+ + +++I A A+ +G+ P G+ ++N + G+
Sbjct: 499 APLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINVTADKGLF 558
Query: 482 AKHKK 486
A++ K
Sbjct: 559 AQYVK 563
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 188/395 (47%), Gaps = 32/395 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDG +++ + AIN + DG +Y+P GK+L L S+ L++
Sbjct: 84 NVKDFGAAGDGVKTDSVCIQAAINACPK---DG--TVYIPKGKYLCTPVFLKSNIDLWID 138
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDA---------AAGRYTSLIFGTNLTDVIVTGD 228
KDA L+ +D ++P++ + D + +LI G ++ +V++ G+
Sbjct: 139 KDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGE 198
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G +DG + WW+ K + + RP + NI + L ++NSPSW VHP YS N
Sbjct: 199 -GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSDN 256
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+L TI+ P SPNTDG++P+SC N I I GDDCVA+KSG + + P K
Sbjct: 257 LLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAK 316
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
+VIR + ++ +GSE++ G+ DV E T+ G+RIKT GRG + +
Sbjct: 317 NIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVADNV 454
I + M + F Y D H D + P I I RDI +NV
Sbjct: 376 ICFENIIMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 455 -SMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
++ A L G+ P I + N T+ P
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLNFDKNENIKP 470
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 164/329 (49%), Gaps = 43/329 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I DFGG GDGK +N+ AF A ++S+ +GG +L VP G W +G + S TL L +
Sbjct: 6 IDDFGGKGDGKFNNSNAFALAFAEISR---NGGGKLTVPKGVWASGPIEIPSDTTLELEE 62
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+ + D N + P + R L+ ++ +V +TG GT++G G
Sbjct: 63 GSEISFIPDPNLY-----TPVFTRWEGVECFAMHPLVLSSHTKNVRITG-KGTLNGNGET 116
Query: 239 WWQ----------------------QFHKG-----------KLKYTRPYLMEFMYTDNIQ 265
WW + + G ++++ RP L+E + +N+
Sbjct: 117 WWNLKKAKKERGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFAENVS 176
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + + +SP W VHP+Y N+ ++GI I P T+PNTDGI+ DSC N IEDC++ GD
Sbjct: 177 VEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFVSVGD 236
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
D + +KSG GI PT + IR T + + I +GSE + G+ + A
Sbjct: 237 DGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNAHGG-IVIGSETAAGMSHIHAVGCDLSG 295
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
T+ G+RIK+ GRGG + DI +R M M+
Sbjct: 296 TDRGIRIKSRRGRGGDIFDIELRDMVMNN 324
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 198/402 (49%), Gaps = 55/402 (13%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG GDG+T +++FK AI +LS+ GG +L VP G +LTG +L S+ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K PV+ R Y+ L++ + +V +TG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 135
Query: 235 QG--ALWW----------------QQFHKGKLK------------------YTRPYLMEF 258
WW QQ KLK Y RP ++F
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
N+ + + ++NSP W VHPV S N++++ I I + T PN DGI+P+SC IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 253
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVR 377
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDI-YVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
A + +N E +R+KT RGGY+++I ++ + ++ + + Y DN + +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----DNE-EGE 368
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LPV++ + +++ A A R+EG+ D I I++ I
Sbjct: 369 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTII 410
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 198/402 (49%), Gaps = 55/402 (13%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG GDG+T +++FK AI +LS+ GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K PV+ R Y+ L++ + +V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 133
Query: 235 QG--ALWW----------------QQFHKGKLK------------------YTRPYLMEF 258
WW QQ KLK Y RP ++F
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
N+ + + ++NSP W VHPV S N++++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVR 377
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDI-YVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
A + +N E +R+KT RGGY+++I ++ + ++ + + Y DN + +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----DNE-EGE 366
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LPV++ + +++ A A R+EG+ D I I++ I
Sbjct: 367 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTII 408
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 202/417 (48%), Gaps = 64/417 (15%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S +T FG +GK +T+A + AI+Q Q GG ++ VP G +L+G+ L S+ L+
Sbjct: 23 SFDVTSFGADENGKNDSTEAIQKAIDQAHQA---GGGRVTVPEGVFLSGALRLKSNVDLH 79
Query: 176 LHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ K A + SQ+ ++ PV+ R Y+ LI+ ++ +TG GT+DG
Sbjct: 80 IAKGAVIKFSQNPEDYLPVV-----LTRFEGVELYNYSPLIYAYEADNIAITG-KGTLDG 133
Query: 235 QG--ALWW-------------------------------QQFHKGKLKYTRPYLMEFMYT 261
QG WW +QF KG Y RP ++
Sbjct: 134 QGDDEHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTERQFGKGH--YLRPNFIQPYRC 191
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+I I +T+LNSP W VHPV N+ V GI +I PNTDG+NP+SC N I+ C+
Sbjct: 192 KHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHF 249
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED- 380
+GDDC+AVKSG + G +P++ +VI + + +GSE+SGG+++V AE
Sbjct: 250 DNGDDCIAVKSGRNADGRRINIPSENIVIEHNEMKDGHGG-VTIGSEISGGVKNVIAEGN 308
Query: 381 -IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW---AFWMTGNYGSHADNHYDPK 436
+ + N + +RIKT RGG +++IY T+ ++K A M G D
Sbjct: 309 LMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGD------ 362
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIG-----MAAKHKKVP 488
PV++ ++ + + + R+ P TG+ +A++ I M KH K P
Sbjct: 363 FKPVVRTVDVKQLKSMGGQYGIRVLAYDHSPVTGLKVADSEIDGVDVPMELKHVKDP 419
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 198/402 (49%), Gaps = 55/402 (13%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG GDG+T +++FK AI +LS+ GG +L VP G +LTG +L S+ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K PV+ R Y+ L++ + +V +TG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 135
Query: 235 QG--ALWW----------------QQFHKGKLK------------------YTRPYLMEF 258
WW QQ KLK Y RP ++F
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
N+ + + ++NSP W +HPV S N++++ I I + T PN DGI+P+SC IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 253
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVR 377
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDI-YVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
A + +N E +R+KT RGGY+++I ++ + ++ + + Y DN + +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----DNE-EGE 368
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LPV++ + +++ A A R+EG+ D I I++ I
Sbjct: 369 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTII 410
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 197/402 (49%), Gaps = 55/402 (13%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG GD +T +++FK AI +LS+ GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDRRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K PV+ R Y+ L++ + +V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 133
Query: 235 QG--ALWW----------------QQFHKGKLK------------------YTRPYLMEF 258
WW QQ KLK Y RP ++F
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
N+ + + ++NSP W VHPV S N++++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVR 377
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDI-YVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
A + +N E +R+KT RGGY+++I ++ + M+ + + Y DN + +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRINLRY----DNE-EGE 366
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LPV++ + +++ A A R+EG+ D I I++ I
Sbjct: 367 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTII 408
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 201/384 (52%), Gaps = 28/384 (7%)
Query: 125 VGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLA 184
+G + T + IN + + GG QL + AG + GS L S FTL+L A L
Sbjct: 13 LGGTVSERTNCLQATINDILEA---GGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVLKF 69
Query: 185 SQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH 244
S + + +P P R A Y + ++G++L V +TG+ G +DGQG WW++F
Sbjct: 70 SHETDVYP-----PVESRWEGATQTVYRACLYGSHLKRVKITGE-GVVDGQGKKWWRRFD 123
Query: 245 K--GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
+ +L+Y RPYL +++ + I ++T +NSP+W +HP N+ + +T++ P SPN
Sbjct: 124 EKAAELEYPRPYLCSIEHSEQVVIENVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPN 183
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
TDG++P+SC N RI +C GDDC+A+KSG ++ + + + ++I + +
Sbjct: 184 TDGLDPESCRNIRIANCCFDVGDDCIAIKSGTED--ASQSIACENIIISGCNMVHGHGG- 240
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW----- 417
+ GSEMSG I++V + +T+ G+R KT GRGG + I V + M +
Sbjct: 241 VVFGSEMSGDIRNVTISNCVFQDTDRGIRFKTRRGRGGRISGISVNNIVMDNVLCPLIIN 300
Query: 418 AFWMTGNYGSHADNHYDPKALPV------IQGINYRDIVADNV-SMAARLEGISGDPFTG 470
+++ G G+ A + +ALPV + +++ ++A N+ S A + G+ +
Sbjct: 301 SYYFCGKRGNEA-YVWTKEALPVDERTPKLSNLSFSHLIATNIRSCAGFIYGLPEMAISN 359
Query: 471 ICIANATIGMAAKHK-KVPWTCAD 493
+ +++A ++ + + P AD
Sbjct: 360 VTLSDARFELSKDSQPEAPAMIAD 383
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 184/373 (49%), Gaps = 40/373 (10%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ ++ DFG GDG +T + AI S +++ +P G + S L H T+
Sbjct: 89 YTLNVRDFGAKGDGVQDDTTYIQAAI-----MSCPRNSRVLIPEGTYRVTSLFLKDHLTM 143
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPS---------YGRGRDAAAGRYTSLIFGTNLTDVIV 225
L K A L A + + +++ G A + ++ G + DV +
Sbjct: 144 ELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTI 203
Query: 226 TGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
G+ GTIDG + WW + + RP ++ +++ I+ +T+ NSPSWN+HP +
Sbjct: 204 CGE-GTIDGNASWENWWLDAKEVR-GAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYF 261
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
S++ G+T++ P SPNTDG+NP+SC + I C GDDC+AVK+G G Y +
Sbjct: 262 CSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKV 321
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
P+ + IR+ C+ +I LGSEM+ GI++++A +NT+ G+RIKT GRG K
Sbjct: 322 PSSNIRIRQ-CCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRG---K 377
Query: 404 DIYVRGMTMH--------TMKWAFWMTGNYGSHADNH------YDPKAL----PVIQGIN 445
D + G+ T+ F + Y D H +P A+ P I+ +
Sbjct: 378 DAVIDGILFEDIRMDSVLTLLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKELC 437
Query: 446 YRDIVADNVSMAA 458
+R+I A N +AA
Sbjct: 438 FRNIQAKNCHVAA 450
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 185/383 (48%), Gaps = 51/383 (13%)
Query: 140 INQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
INQ + + +S+GG +Y PAG +LT + ++ S+ TL+L A + S ++ LP
Sbjct: 41 INQTIEKAASEGGGTIYFPAGTYLTATIHMKSNITLHLESGAIVRFSDRFEDY-----LP 95
Query: 199 SY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW----------------- 240
R + LI+ + ++ +TG GT+DG G WW
Sbjct: 96 FVTARWEGTVMQTLSPLIYAHSADNLTITG-RGTLDGNGLKWWLWEFETRKVIKENGGKL 154
Query: 241 ------QQ-------------FHKGKL--KYTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
QQ ++K L K RP ++F NI I ++ ++NSP W V
Sbjct: 155 PSLDKLQQMWVDANKDLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTV 214
Query: 280 HPVYSSNILVQGITIIAPVTSP---NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
+P + N+ + G+TI P ++P NTDGINP SC N RI DC+I GDDC+ +KSG D
Sbjct: 215 NPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDA 274
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAV 396
G YG + + I +S + + +GSEMSGG++ + + T +G+R+K +
Sbjct: 275 DGRKYGKACENITITNCIMLSGHGG-VVIGSEMSGGVKRIAISNCVFDGTNAGIRLKASR 333
Query: 397 GRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVS 455
GRGG V+DI V + M ++ AF Y + + P+ + I+ ++ +++
Sbjct: 334 GRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNVTGNDIK 393
Query: 456 MAARLEGISGDPFTGICIANATI 478
++GI P + + +N I
Sbjct: 394 RIGYIKGIEEMPISELSFSNMNI 416
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 185/383 (48%), Gaps = 51/383 (13%)
Query: 140 INQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
INQ + + +S+GG +Y PAG +LT + ++ S+ TL+L A + S ++ LP
Sbjct: 41 INQTIEKAASEGGGTIYFPAGTYLTATIHMKSNITLHLESGAIVRFSDRFEDY-----LP 95
Query: 199 SY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW----------------- 240
R + LI+ + ++ +TG GT+DG G WW
Sbjct: 96 FVTARWEGTVMQTLSPLIYAHSADNLTITG-RGTLDGNGLKWWLWEFETRKVIKENGGKL 154
Query: 241 ------QQ-------------FHKGKL--KYTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
QQ ++K L K RP ++F NI I ++ ++NSP W V
Sbjct: 155 PSLDKLQQMWVDANNDLEISDYYKPSLERKMFRPPFIQFYECTNILIENVKIINSPFWTV 214
Query: 280 HPVYSSNILVQGITIIAPVTSP---NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
+P + N+ + G+TI P ++P NTDGINP SC N RI DC+I GDDC+ +KSG D
Sbjct: 215 NPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIKSGRDA 274
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAV 396
G YG + + I +S + + +GSEMSGG++ + + T +G+R+K +
Sbjct: 275 DGRKYGKACENITITNCIMLSGHGG-VVIGSEMSGGVKRIAISNCVFDGTNAGIRLKASR 333
Query: 397 GRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVS 455
GRGG V+DI V + M ++ AF Y + + P+ + I+ ++ +++
Sbjct: 334 GRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNVTGNDIK 393
Query: 456 MAARLEGISGDPFTGICIANATI 478
++GI P + + +N I
Sbjct: 394 RIGYIKGIEEMPISELSFSNMNI 416
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 188/395 (47%), Gaps = 32/395 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDG +++ + AIN + DG +Y+P GK+L L S+ L++
Sbjct: 84 NVKDFGAAGDGVKTDSVCIQAAINACPK---DG--TVYIPKGKYLCTPVFLKSNIDLWID 138
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDA---------AAGRYTSLIFGTNLTDVIVTGD 228
KDA L+ +D ++P++ + D + +LI G ++ +V++ G+
Sbjct: 139 KDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGE 198
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G +DG + WW+ K + + RP + NI + L ++NSPSW +HP YS N
Sbjct: 199 -GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSDN 256
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+L TI+ P SPNTDG++P+SC N I I GDDCVA+KSG + + P K
Sbjct: 257 LLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAK 316
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
+VIR + ++ +GSE++ G+ DVR T+ G+RIKT GRG + +
Sbjct: 317 NIVIRN-SIFRKGHGSVTIGSEVAAGVYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVADNV 454
I + M + F Y D H D + P I I RDI +NV
Sbjct: 376 ICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 455 -SMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
++ A L G+ P I + N T+ P
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLNFDKNENIKP 470
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 200/406 (49%), Gaps = 62/406 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG V DGKT NT AF+ AI + + ++GG ++ VP GK+LTG+ +L S+ L+L
Sbjct: 72 NINDFGAVADGKTLNTLAFQKAIQECA---ANGGGRVLVPNGKYLTGAIHLESNVNLHLE 128
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
A +L S + ++P++ + Y+ LI+ N T++ +TG GT++GQ
Sbjct: 129 DHAEILFSLNPKDYPIV-----HTSWEGTEVMNYSPLIYAKNKTNIAITGK-GTLNGQAD 182
Query: 237 -ALWW------------------------------------QQFHKGKLKYTRPYLMEFM 259
WW + G +Y RP +EF
Sbjct: 183 STNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGIPVSERVFGDGRYLRPNFIEFF 242
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ + + ++NSP W +HP+ ++N+++ G+T+ + PN DG +P+ N I +C
Sbjct: 243 ECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQNILIRNC 300
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+GDDC+A+K+G D G +P+K ++++ I + + +GSE+S G+ +V E
Sbjct: 301 TFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMIDGHGG-VVIGSEISAGVNNVFVE 359
Query: 380 D--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW---MTGN-YGSHADNHY 433
+ + + N + +RIKT RGG +++IYVR + + T+K M N YGS N
Sbjct: 360 NCVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMFYNVYGSQTGNF- 418
Query: 434 DPKALPVIQGINYRDIVADN-VSMAARLEGISGDPFTGICIANATI 478
+P I+ ++ ++ N + EG + P I + N I
Sbjct: 419 ----IPTIRNVSLENVTVKNGGKYSVWAEGYAESPVENITLKNVKI 460
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 196/399 (49%), Gaps = 44/399 (11%)
Query: 111 SCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLIS 170
+C HS +G GDG + +T A + AI+ ++ GG + + G +L+ L S
Sbjct: 32 TCNPHS-----YGAKGDGVSKDTAAIQHAIDACAKR---GGGTVLLTPGTYLSAPIVLKS 83
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
+ TL L K A LL S D N++P I + GR SLI N +++ + G G
Sbjct: 84 NITLKLEKGATLLGSPDFNDYPAITEFRAPGR---------QSLISAQNASNITIEGA-G 133
Query: 231 TIDGQGALWWQQFHKGK------LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
TI+G GA WW+ + K +YTRP L+ F + ++ + +T+ NSP W + P YS
Sbjct: 134 TINGNGASWWKMAREHKDTGVMGSQYTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYYS 193
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
+++++ I ++AP +PNTD I+P S ++ IE GDD +A+KSG + P
Sbjct: 194 DDVIIRNIHVLAPQHAPNTDAIDPFSSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAP 252
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
+ + IR CI + +++GSE++GG Q + AE+I T++G+R+K RG V D
Sbjct: 253 STYITIR--DCIFLHGHGLSVGSEIAGGAQHILAENITMTGTDNGIRVKANRDRGNDVSD 310
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYDP---------KALPVIQGINYRDIVADNVS 455
+ + + M +K A ++ Y + Y P + P I ++ A N
Sbjct: 311 LVFKNIQMTNVKNALIISEFY----PHIYPPMPDNPAPITRLTPHFHNITVENVTATNSK 366
Query: 456 MAARLEGISGDPFTGICIANATI----GMAAKHKKVPWT 490
A + G+ P + + N +I GM + +V T
Sbjct: 367 NAGAIAGLPEAPIRDVVLKNVSIDAQKGMVISNAQVTAT 405
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 186/388 (47%), Gaps = 49/388 (12%)
Query: 134 KAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
K+ + IN+ + + +S+GG +Y P G +LT + ++ S+ TLYL A L S ++
Sbjct: 35 KSCTELINRTIEKAASEGGGTIYFPVGTYLTATIHMKSNITLYLESGAVLRFSDKFEDYL 94
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW------------ 240
L R + LI+ + +V ++G GT+DG G WW
Sbjct: 95 PFVTL----RWEGTVMKSLSPLIYAHSADNVTISG-RGTLDGNGLKWWLWEFDTRKVIKE 149
Query: 241 -----------QQ-------------FHKGKL--KYTRPYLMEFMYTDNIQISSLTLLNS 274
QQ ++K L + RP ++F NI I ++ ++NS
Sbjct: 150 NGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFYECTNILIENVKIINS 209
Query: 275 PSWNVHPVYSSNILVQGITIIAPVTSP---NTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
P W ++P + N+ + G+TI P ++P NTDGINP SC N RI DC+I GDDC+ +K
Sbjct: 210 PFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDDCITIK 269
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SG D G YG + + I +S + + +GSEMSGG++ V + T +G+R
Sbjct: 270 SGRDADGRKYGKACENITITNCIMLSGHGG-VVIGSEMSGGVKRVAISNCVFDGTNAGIR 328
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
+K + GRGG V+DI V + M ++ AF Y + + P+ + I+ ++
Sbjct: 329 LKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKVEPVSERTPIFRNIHLSNVT 388
Query: 451 ADNVSMAARLEGISGDPFTGICIANATI 478
+++ ++GI P + + +N I
Sbjct: 389 GNDIKRIGYIKGIEEMPVSELSFSNMNI 416
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 211/437 (48%), Gaps = 63/437 (14%)
Query: 84 IVVALLSQRGAESRKARRLDSF--EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAIN 141
I +A L+++G + ++ +D + A ++ +G G +T A + AI+
Sbjct: 19 IGLARLAKQGKKDKETDGIDHVLKQIKAPKFPDREFNVIHYGADNKGIELSTNAIQSAID 78
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSY 200
+ G ++ +P G +LTG+ L S+ L+LH++A++ SQD ++ P++
Sbjct: 79 DAHRLK---GGRVLIPEGTFLTGALELKSNVELHLHENAYVSFSQDTRDYLPLV-----L 130
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW------------------ 240
R Y+ LI+ + ++ +TG GT+DG+G WW
Sbjct: 131 TRYEGIELYNYSPLIYAHHAENIAITG-AGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQL 189
Query: 241 -----------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
++ G+ Y R ++ NI I +T+ +SP W VHPV S N++V
Sbjct: 190 LFEMAEKRIPVEERVFGEGHYLRSSFIQPYNCQNILIEGVTVKDSPMWQVHPVLSENVIV 249
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 349
+G+ II PNTDG+NP+SC + IEDCY +GDDC+A+KSG +E G G+P++ +V
Sbjct: 250 RGVNIIG--HGPNTDGVNPESCRHVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIV 307
Query: 350 IRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYV 407
IRR T + + +GSE+SGG++ V AED + + N + +RIKT RGG ++ IY
Sbjct: 308 IRRNTMRDGHGG-VTIGSEISGGVKYVYAEDNVMDSPNLDRALRIKTNSVRGGTIEHIYF 366
Query: 408 RGMTMHTMKWA------FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLE 461
+ + ++K + G+ G H PV++ I + + ++
Sbjct: 367 KNNLVKSLKHEVVCIDMMYEEGDAGPHR---------PVVRHIEVEGLKSSGGRYGVKIA 417
Query: 462 GISGDPFTGICIANATI 478
S P T + + I
Sbjct: 418 AYSHSPVTHFKMKDCVI 434
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 198/417 (47%), Gaps = 64/417 (15%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S +T FG G GK T A + AI+Q + GG ++ VP G +L+G+ L S+ L+
Sbjct: 23 SFDVTAFGADGSGKKDATGAIQKAIDQAHKA---GGGRVAVPEGVFLSGALRLKSNVELH 79
Query: 176 LHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
L + A + SQ+ ++ PV+ R Y+ LI+ ++ +TG GT+DG
Sbjct: 80 LAQGAVIKFSQNPEDYLPVV-----LTRFEGVELYNYSPLIYAYEAENIAITG-KGTLDG 133
Query: 235 QG--ALWW-------------------------------QQFHKGKLKYTRPYLMEFMYT 261
QG WW +QF KG Y RP ++
Sbjct: 134 QGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGH--YLRPNFIQPYRC 191
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+I I +T+LNSP W VHPV N+ V GI +I PNTDG+NP+SC N I+ C+
Sbjct: 192 KDILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHF 249
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED- 380
+GDDC+AVKSG + G MP++ +VI + + +GSE+SGG+++V AE
Sbjct: 250 DNGDDCIAVKSGRNADGRRINMPSENIVIEHNEMKDGHGG-VTIGSEISGGVKNVIAEGN 308
Query: 381 -IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW---AFWMTGNYGSHADNHYDPK 436
+ + N + +RIKT RGG +++IY T+ ++K A M G D
Sbjct: 309 LMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGD------ 362
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIG-----MAAKHKKVP 488
PV++ I+ + + R+ P TG+ + ++ I M KH K P
Sbjct: 363 FKPVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPMELKHVKDP 419
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 194/367 (52%), Gaps = 32/367 (8%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ ++ FG GDG +T A + AI + DG ++Y+P GK+L S L S FTL
Sbjct: 81 TLNVRRFGAKGDGIHDDTLAIQTAIASCPK---DG--RVYIPEGKYLVTSLFLKSDFTLD 135
Query: 176 LHKDAFLLASQDLNEWPVIKPL-PSYGRGRDAAAGR--------YTSLIFGTNLTDVIVT 226
+ K+A LL + ++ V+ + SY + G +TS+I G ++++V++T
Sbjct: 136 IGKNAVLLGHAEREKFGVLPGMIQSYDETGEYNLGSWEGNPLDIFTSMITGIHVSNVVIT 195
Query: 227 GDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
G+ GT+DG WW+ + K+ RP ++ + D++ + +T+ NSPSWN+HP +S
Sbjct: 196 GE-GTLDGCATFDDWWED-DRAKIIAFRPRMVFLNHCDHVVLHGVTIQNSPSWNLHPYFS 253
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
++ +TI+ P SPNTDG++P+S I Y GDDC+A+KSG G Y +P
Sbjct: 254 DDLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKVP 313
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYV 402
++ + +R+ C++ + +GSEM+ G++ V +D ++T+ G+RIKT GRG V
Sbjct: 314 SQNIEVRQ-CCMNNGHGAVTIGSEMAAGVKHVHVKDCLFLHTDRGLRIKTRRGRGKDAVV 372
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKALPV------IQGINYRDIVA 451
+DI + M + F + Y H+D LPV ++ + +R+I A
Sbjct: 373 EDICFENIRMDHVLTPFVLNSFYNCCDPDCHSDYVKCKSPLPVDERTPSVKQMVFRNIEA 432
Query: 452 DNVSMAA 458
N +A
Sbjct: 433 HNCHVAG 439
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 198/438 (45%), Gaps = 78/438 (17%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ ++ DFG +GDG + T AF AI+ L+Q GG +L VP G W TG L S+
Sbjct: 46 ANEVNLKDFGAIGDGSSLCTTAFAKAIDALTQ---KGGGKLIVPQGVWFTGPIVLKSNIN 102
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L+L K A +L S D +P I+ + G D R S I G +LT+V +TG G ID
Sbjct: 103 LHLEKGAVILFSPDDALYPFIE---TSFEGLDTR--RCQSPISGHHLTNVAITG-QGCID 156
Query: 234 GQGALW------------WQQF---------------HKGKLK----------------- 249
G G W W+Q +G LK
Sbjct: 157 GNGEYWRPLKKQKVTAAQWKQITSRGGAFKRADYWFPSEGALKADNSANMNVPKTPASEE 216
Query: 250 -------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
+ RP ++ + N+ ++ + NSP+WN+HP+ N+L++ + + P + N
Sbjct: 217 EWNEIKRFLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQN 276
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG++ +SC N I + GDD + +KSG D G G+P + +++ T +
Sbjct: 277 GDGLDLESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTVFKGHGGF 336
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK-----W 417
+ +GSEMSGG+++++ D + + T+ G+R K+ GRGG V++IY+ M+M ++ +
Sbjct: 337 V-VGSEMSGGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDVITF 395
Query: 418 AFWMTGNYGSHADNHYDP------------KALPVIQGINYRDIVADNVSMAARLEGISG 465
+ G N D + P + I+ ++ AA G+
Sbjct: 396 DLYYGGKSAVEVLNDGDEAKSQKVQKFKVDETTPCFRNIDINHVICRTARRAAYFNGLPE 455
Query: 466 DPFTGICIANATIGMAAK 483
P + I I + + A +
Sbjct: 456 MPVSNIHIKDMEVNNAQQ 473
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 194/374 (51%), Gaps = 36/374 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+TDFG VGDG T NT+AF ++ + GG +L VPAG + TG F L S L+L
Sbjct: 91 LTDFGAVGDGTTLNTEAFA---RAIAAVAKAGGGKLVVPAGTFRTGPFALCSSLELHLEA 147
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGR-DAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A + A +W + +P + +AA LI G L DV +TG +G IDG GA
Sbjct: 148 GALIQAPATFADWGLPEPTTFSSQAEVNAAVKPVPPLIHGRKLHDVAITG-SGQIDGNGA 206
Query: 238 LWWQ------QFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
LWW + +G+L Y R +++ + ++++ +TL NS +++ P +++ ++
Sbjct: 207 LWWAWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTLSNSAMFHLVPRRITDLTIER 266
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+ + AP +PNTD I+P S TN I C I +GDD + +KSG I
Sbjct: 267 VKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIKSGGTNILIE----------- 315
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
C+ + I++GSE + G++++ T++G+RIK+ G GG V++I G+T
Sbjct: 316 --DCVIKHGHGISIGSETTEGVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIRYTGIT 373
Query: 412 MHTMKWAFWMTGNYGSHADNHY--DPKALPVIQGINYRDIVADNVSM-----AARLEGIS 464
M ++ A + Y + ++ DP +PVI RDI+ D+V++ A ++ G+
Sbjct: 374 MKDVENAIVLDLTYTDNNRPNFRGDPTKIPVI-----RDILIDHVTVTGSLKAGKIVGLP 428
Query: 465 GDPFTGICIANATI 478
P +G+ + + TI
Sbjct: 429 DSPISGVTLRDVTI 442
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 198/403 (49%), Gaps = 58/403 (14%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S ITD+G VGDG+T NT AF+ I + GG Q+ VP G++LTG+ +L S L+
Sbjct: 67 SFRITDYGAVGDGRTMNTAAFRATIAACHRA---GGGQVVVPEGRFLTGAIHLRSRVNLH 123
Query: 176 LHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ A + S D ++ PV+ R Y+ I+ DV VTG GT+DG
Sbjct: 124 VTAGATIAFSPDPRDFLPVV-----LTRWEGTECYNYSPFIYAYGARDVAVTGP-GTLDG 177
Query: 235 QGALW-WQQFHK---------------------------GKLKYTRPYLMEFMYTDNIQI 266
Q L W+ +++ G RP +++F N+ +
Sbjct: 178 QARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQFYRCRNVLV 237
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
S LT+++ P W VHPV SSN+ V+G+T+ + T NTDG +P+ C++ I C + DD
Sbjct: 238 SDLTIVDPPMWTVHPVLSSNVTVRGVTVDS--TLYNTDGCDPECCSDVLITGCRFNTNDD 295
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN- 385
CVAVKSG DE G G+P++ +V+R S + +GSEMSGG++D+ AE+ + IN
Sbjct: 296 CVAVKSGRDEDGHRVGVPSRNIVVRDCQ-FSGRWGGMTVGSEMSGGVRDIFAENCE-INP 353
Query: 386 --------TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-WMTGNYGSHADNHYDPK 436
+ + +K RGG++ +++R T ++ ++T Y D
Sbjct: 354 PDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFVTMAYNGGEDG----- 408
Query: 437 ALPV-IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LPV ++ I+ + D RL G+ D G+ ++ +T
Sbjct: 409 TLPVSVRNIHMDRMAIDGAQTVLRLVGLDTDHLRGVRLSRSTF 451
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 191/417 (45%), Gaps = 60/417 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T G G +T AF++A LS+ GG +L+VP G +L G L SH + +
Sbjct: 5 VTTLGADPTGLRESTDAFREA---LSRIEGAGGGRLHVPPGDYLVGPLRLCSHLEFEVAR 61
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A + QD + +PV+ + R Y +IF D+ ++G G IDGQG
Sbjct: 62 GARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMIFVEGAEDIRISG-GGVIDGQGDA 115
Query: 239 WWQ---QFHKGKL------------------------------KYTRPYLMEFMYTDNIQ 265
WW+ + +G++ + RP L++ + +
Sbjct: 116 WWRMYRDYREGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVV 175
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
I + L NS WN H +YS + ++G++ P +PNTDG+N DS N RIEDC GD
Sbjct: 176 IEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGD 235
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAI 384
DC+ +KSG DE G G PT+ +VIR CI I GSE++GG+++V
Sbjct: 236 DCLGLKSGIDEDGRRVGRPTEHVVIR--GCIMRRGHGGIVCGSEIAGGVRNVVVTGCIFQ 293
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--------- 435
+T+ G+RIK+ GRGG+V+++ V + M + + Y D +
Sbjct: 294 DTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGIDPGEEETISRLASLL 353
Query: 436 -----KALPVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMAAKHKK 486
+ P ++ I+ + A V S A L G+ P G+ +++ + M + ++
Sbjct: 354 PLPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLSDYRVVMDEEGQE 410
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 197/401 (49%), Gaps = 54/401 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I +G V DG++ +T A AI + GG ++ VPAG +LTG+ +L+S+ L+L +
Sbjct: 55 IQHYGAVADGQSLSTGAINSAIIACHKA---GGGRVLVPAGHYLTGAVHLLSNVELHLAE 111
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+A L S+D N++ LP+ + R Y+ LI+ ++ +TG G +DG +
Sbjct: 112 NARLSFSRDPNDY-----LPAVFTRWEGVEYMGYSPLIYAYQAENIGITG-TGVLDGSAS 165
Query: 238 --LWW---------------------------------QQFHKGKLKYTRPYLMEFMYTD 262
WW +Q H Y RP ++
Sbjct: 166 EMHWWPWKGTSEWARPGFASQDNSRAQLFAQAEAGVPPRQRHYSDGHYLRPPFIQPYQCR 225
Query: 263 NIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIV 322
N+ + +T++N+P W VHPV N+ + + + + PN+DG NP+SC N IE C+
Sbjct: 226 NVLLEDVTIINAPFWLVHPVLCDNVTARRLHLQS--LGPNSDGCNPESCRNVLIEHCFFD 283
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED-- 380
+GDDC+A+KSG + G +P++ +VIR + + + +GSE+SGG+++V A D
Sbjct: 284 TGDDCIAIKSGRNADGRRLNIPSENIVIRHCEMRAGHGGVV-IGSEISGGVRNVYAHDNR 342
Query: 381 IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPV 440
+ + + E G RIKT RGG +++IY+R + + +K A + +Y +D P
Sbjct: 343 MSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVINFHYEEGDAGKFD----PT 398
Query: 441 IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMA 481
++ IN +I ++ ++ G P + I N+T A
Sbjct: 399 VRNINLDNISCEHAQQVFQIRGFDRAPIKQLSITNSTFNRA 439
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 197/390 (50%), Gaps = 43/390 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SITDFG G+ +T AF+DAI ++S + GG ++ +PAG++LTG+ +L S+ L++
Sbjct: 74 SITDFGADPTGEHLSTAAFRDAIEEVS---AAGGGRVVIPAGEFLTGAIHLRSNVELHVG 130
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A + SQ+ + + LP+ Y R Y+ I+ + +V +TG +G +DGQ
Sbjct: 131 SGAVVRFSQNPDHY-----LPAVYTRWEGVELYNYSPFIYARGVENVAITG-SGVLDGQA 184
Query: 237 --ALWW------------------------QQFHKGKLKYTRPYLMEFMYTDNIQISSLT 270
WW +Q G + RP ++F + NI + +T
Sbjct: 185 DEKHWWNWSGSTQAEDRETLFRMGEQGVPVEQRRFGAGHHLRPNFVQFYDSRNILVQGVT 244
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
L NSP W +HPV S NI V G+ + +P PN DG+NP+S + I++ +GDDC+A+
Sbjct: 245 LKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNPESSRDVVIKNSRFDNGDDCIAI 303
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTES 388
KSG + G G+P++ ++I + + +GSEMSG +++V A+ + + N
Sbjct: 304 KSGRNADGRRIGVPSENILIEN-NHMQDGHGGVVMGSEMSGSVRNVFAQHNVMDSPNLHR 362
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRD 448
+RIKT RGG V+++Y R T+ + + AD+ P+++ I+ D
Sbjct: 363 ALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNFFYEEADS---GPHTPIVRNIHIED 419
Query: 449 IVADNVSMAARLEGISGDPFTGICIANATI 478
+ +DN A L G P + + + ++
Sbjct: 420 LRSDNGEYALYLRGYERSPVSNVTVTDSVF 449
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 183/367 (49%), Gaps = 37/367 (10%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ DFG GDG +T + AI + S ++ +PAG + S L + + L +
Sbjct: 84 VRDFGAKGDGIQDDTLFIQAAIMACPEKS-----RVLIPAGTYRIVSLFLKDNVNIELAE 138
Query: 179 DAFLLASQDLNEWPVIKPL-PSYGRGRDAAAG--------RYTSLIFGTNLTDVIVTGDN 229
A L A D +PV + + SY + G +T +I G N+ + ++ G
Sbjct: 139 GAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIITGVNVKEAVIYG-Q 197
Query: 230 GTIDGQGAL----WWQQFHKGKLKYT--RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
G IDG WW H+ K+ +T RP ++ + + +T+ NSPSWN+HP +
Sbjct: 198 GIIDGNAGTGEGNWW---HEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHPYF 254
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
S ++ + +++P SPNTDG++P+SC + I GDDC+AVKSG G Y
Sbjct: 255 SDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIYMGSTYKC 314
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GY 401
P+K + IRR C+ ++ +GSEM+GG++D+ +D ++T+ G+RIKT GRG
Sbjct: 315 PSKNISIRR-CCMRDGHGSVTIGSEMAGGVKDLTVKDCMFLHTDRGLRIKTRRGRGKDAV 373
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIVA 451
V I + M + F + Y D H + +ALPV I+ + +RDI A
Sbjct: 374 VDKIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALPVDDKTPFIKSLCFRDIEA 433
Query: 452 DNVSMAA 458
+N +AA
Sbjct: 434 ENCHVAA 440
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 200/407 (49%), Gaps = 56/407 (13%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG GD +T +++FK AI +LS+ GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K PV+ R Y+ L++ + +V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCKNVAITG-SGVLDG 133
Query: 235 QG--ALWW----------------QQFHKGKLK------------------YTRPYLMEF 258
WW QQ KLK Y RP ++F
Sbjct: 134 SADNEHWWSWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
N+ + + ++NSP W VHPV S N++++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVR 377
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDI-YVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
A + +N E +R+KT RGGY+++I ++ + ++ + + Y DN + +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----DNE-EGE 366
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
LPV++ + +++ A A R+EG+ D I I++ TI AK
Sbjct: 367 YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISD-TIMEGAK 412
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 194/436 (44%), Gaps = 77/436 (17%)
Query: 110 ISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI 169
++ +A + SI FG GDG + NT++ AI +SQ GG + +P G WLTG L
Sbjct: 40 VNIKADTTSIVSFGAKGDGVSMNTESINKAIAAVSQ---KGGGVVLIPGGLWLTGPIELK 96
Query: 170 SHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
S+ L+L +DA L + D N++ +++ G A R S I GT+L ++ +TG +
Sbjct: 97 SNVNLHLKRDALLQFTDDFNQYKLVE-----GNWEGQPAWRNQSPISGTDLQNIAITG-S 150
Query: 230 GTIDGQGALW------------WQQF--------HKGKLKY------------------- 250
G IDG G W W++ GK+ Y
Sbjct: 151 GIIDGNGGAWRMVKRDKLTESQWKKLTTSGGLVSEDGKMWYPSEKTFKGSKTKNAGVVAA 210
Query: 251 -------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
RP L+ I + +T NSP+WN+HP+ ++ ++ + + P
Sbjct: 211 GQSAADLQSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNP 270
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ N DG++ +SC N IE GDD + +KSG DE G G PT+ ++IR
Sbjct: 271 WFAQNGDGVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNVVYH 330
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM----- 412
+ + +GSEMSGG +++ D I T+ G+R KT GRGG V+DIY+ + M
Sbjct: 331 AHGGFV-VGSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINMIDIPG 389
Query: 413 ----HTMKWA----FWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMAARLEG 462
M +A + G P +A P + I +D+VA+ A + G
Sbjct: 390 EAILFDMYYAAVDPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVANGAEKAIFVRG 449
Query: 463 ISGDPFTGICIANATI 478
+ I + N TI
Sbjct: 450 LPEMNIKDIYLENVTI 465
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 204/401 (50%), Gaps = 58/401 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+ITD+G VGDG+T NT+AF+ AI + GG + VP G++LTG+ +L S L++
Sbjct: 63 TITDYGAVGDGQTMNTEAFRAAIADCHRA---GGGHVLVPEGRFLTGAIHLRSGVDLHVT 119
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A + S D ++ PV+ + R Y+ I+ +V VTG GT+DGQ
Sbjct: 120 EGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAVTGP-GTLDGQA 173
Query: 237 ALW-WQQFHK---------------------------GKLKYTRPYLMEFMYTDNIQISS 268
L W+ +++ G Y RP +++F N+ +S
Sbjct: 174 RLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRCRNVLVSG 233
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
LT+++ P W VHPV S+N+ V+ IT+ + T NTDG +P+ C++ I C + DDCV
Sbjct: 234 LTIVDPPMWTVHPVLSTNVTVRDITVDS--TLYNTDGCDPECCSDVLITGCRFNTNDDCV 291
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT-- 386
AVKSG DE G G+P++ +V+R S + +GSEMSGG++D+ AE+ + IN+
Sbjct: 292 AVKSGRDEDGHRVGVPSRNIVVRDCR-FSGRWGGMTVGSEMSGGVRDIFAENCE-INSPD 349
Query: 387 -------ESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKAL 438
+ + +K + RGG + +++R T + + A ++ NY N + L
Sbjct: 350 FPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVEREAVFVNMNY-----NGGEGGTL 404
Query: 439 PV-IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
PV ++ I+ + D +L G+ D G+ ++ +T
Sbjct: 405 PVSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTF 445
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 189/368 (51%), Gaps = 34/368 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
I DFG + T DAI++ + S GG + VPAG+WLTG +L S+ L+L
Sbjct: 68 IRDFGA-KEMDADKTNKCTDAIHKAIDAASESGGGTVLVPAGQWLTGPVHLKSNINLHLE 126
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K+A L S+D ++ + P R Y+ LI+ N+T+V +TG GT++GQG
Sbjct: 127 KNASLFFSEDKTDYLPVVP----QRYEGVEVYNYSPLIYAANVTNVSITG-KGTLEGQGQ 181
Query: 238 LW--W-----------------QQFHKGKLKY-TRPYLMEFMYTDNIQISSLTLLNSPSW 277
W W + F KG K RP + F + NI + +TL SP W
Sbjct: 182 HWLEWGTVQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILVEGITLNESPMW 241
Query: 278 NVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
N+H VYS N +V+ IT+ + + S N DG+ DS + +E + +GDD + +KSG++E
Sbjct: 242 NIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDSSHDVLLEYNQLHTGDDAIVLKSGFNED 300
Query: 338 GIAYGMPTKQLVIRRLTC--ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTA 395
G+A +PT+ +VIR + S + GSE SGGI++V D + G+R KTA
Sbjct: 301 GLAINIPTENVVIRNYYAYKVRTGSGGVVFGSETSGGIRNVYVHDAVFEKCDRGIRFKTA 360
Query: 396 VGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVS 455
GRG +++I+VR ++M + + ++A P P+++ I+ R+I D V
Sbjct: 361 RGRGNVIENIFVRDISMKDITYEAININT--AYAGAGIGPS--PMVRNIDIRNIRIDGVP 416
Query: 456 MAARLEGI 463
A L G+
Sbjct: 417 DAIVLNGL 424
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 191/395 (48%), Gaps = 32/395 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG +GDG ++ + AIN + DG +Y+P GK+L L S+ +++
Sbjct: 84 NVKDFGALGDGSGLDSGYIQAAINACPK---DG--TVYIPKGKYLCTPVFLKSNIDIWID 138
Query: 178 KDAFLLASQDLNEWPVIKPL-PSYGRGRDAAAGR--------YTSLIFGTNLTDVIVTGD 228
KDA L+ +D ++P++ + S ++ G + +LI G ++ +V + G+
Sbjct: 139 KDAILIGEKDRKKYPILPGMIESSDEKKEYNIGSWEGNPLDCFAALITGISVENVHIYGE 198
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G +DG ++ WW+ K + + RP + NI + L ++NSPSW VHP YS N
Sbjct: 199 -GILDGNASMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSDN 256
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+L TI+ P SPNTDG++P+SC N I I GDDCVA+KSG + + P K
Sbjct: 257 LLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAK 316
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
+VIR + ++ +GSE++ G+ DV E T+ G+RIKT GRG + +
Sbjct: 317 NIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVADNV 454
I + M + F Y D H D + P I I RDI +NV
Sbjct: 376 ICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 455 -SMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
++ A L G+ P I + N T+ P
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLNFDKNENIKP 470
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 211/437 (48%), Gaps = 63/437 (14%)
Query: 84 IVVALLSQRGAESRKARRLDSF--EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAIN 141
I + L+++G ++++A +D + A ++ +G G +T+A + AI+
Sbjct: 19 IGLTRLARQGKKNKEANGIDQVLKQIKAPLFPDREFNVVHYGADAQGIELSTEAIQSAID 78
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSY 200
+ G ++ +P G ++TG+ L SH L+LH+ A++ SQ+ ++ P++
Sbjct: 79 DAHRLK---GGRVLIPEGTFVTGALELKSHVELHLHEKAYVSFSQNPKDYLPLV-----L 130
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW------------------ 240
R Y+ LI+ + ++ +TG GT+DG+G WW
Sbjct: 131 TRYEGVELYNYSPLIYAHHAENIAITG-AGTLDGRGDEHHWWPWKYGTNGQPSQERDRQL 189
Query: 241 -----------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
++ G+ Y R ++ + I +T+ +SP W +HPV S +++V
Sbjct: 190 LFDMAEKRRPVEERVFGEGHYLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSEHVIV 249
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 349
+G+ II PNTDG+NP+SC N IEDCY +GDDC+A+KSG +E G G+P++ +V
Sbjct: 250 RGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIV 307
Query: 350 IRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYV 407
IRR + + +GSE+SGG++ V AE+ + + N + +RIKT RGG ++ IY
Sbjct: 308 IRRNEMRDGHGG-VTIGSEISGGVRYVYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYF 366
Query: 408 RGMTMHTMKWA------FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLE 461
+ T+ ++K + G+ G H PV++ I + + ++
Sbjct: 367 KNNTVKSLKHEVVCIDMMYEEGDAGPHR---------PVVRHIEVEGLKSSGGRYGVKIA 417
Query: 462 GISGDPFTGICIANATI 478
S P T + N I
Sbjct: 418 AYSHSPVTNFNMKNCVI 434
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 61/408 (14%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R +TDFG +GDGKT NT AFK AI + + +GG ++ VP G +LTG+ L S+
Sbjct: 47 RKKDYLVTDFGAIGDGKTKNTGAFKKAIEKCN---VEGGGRVVVPKGIFLTGAIYLKSNV 103
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L++ + A +L SQD N++P++ + R Y+SLI+ ++ +TG GT+
Sbjct: 104 DLHISEGATILFSQDSNDYPIV-----FTRWEGMECMNYSSLIYAHEEENIAITG-KGTL 157
Query: 233 DGQ--GALWW-----------------QQFHKGKLK------------------YTRPYL 255
DG WW Q + KL Y RP
Sbjct: 158 DGNSDNDHWWFWCGAKKYGWNESRPGRQNPARAKLHEYMAQKKDPRERIFGDGYYLRPNF 217
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
++ + N ++ + + NSP WN++PV N+L++ + +I+ PN DG +P++C N
Sbjct: 218 VQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDPEACKNVW 275
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
I+D Y +GDDC+A+KSG DE G G P + +I + + +GSE++GG ++
Sbjct: 276 IKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCEMKDGHGGVV-IGSEIAGGAKN 334
Query: 376 VRA--EDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHY 433
+ A + + N E +RIKT+ RGG +++++ + K A + HY
Sbjct: 335 IYAIGNVMDSKNLERALRIKTSSNRGGIIENVFFYNTKVGAYKEA-------AVRFNMHY 387
Query: 434 DPKA--LPVIQGINYRDIVADNVSMAARL-EGISGDPFTGICIANATI 478
+ +P I+ I ++ + A L + P T + NA I
Sbjct: 388 EKPGNFIPTIRNIWVENLTVEKGGKYAILSDAYESSPVTDFTMVNAKI 435
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +++DFG VGDG T+AF AI+ LSQ GG +L VPAG W TG L S+ L
Sbjct: 48 NEVNLSDFGAVGDGTQLCTEAFARAIDALSQ---KGGGRLTVPAGVWFTGPIVLKSNINL 104
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K A +L S D++ +P+++ + G D R S I G NLT+V +TG G IDG
Sbjct: 105 HVEKGAVILFSPDIDLYPLVE---TVFEGLDTR--RCQSPISGRNLTNVAITG-QGAIDG 158
Query: 235 QGALW------------WQQF---------------HKGKLK------------------ 249
G W W+ + G LK
Sbjct: 159 NGHFWRPLKRQKVTESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKTEEE 218
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ + N+ + + NSP+WN+HP+ N+L++ + + P + N
Sbjct: 219 WQSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNG 278
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + +KSG DE G P + +++ T + +
Sbjct: 279 DGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCTVFKGHGGFV 338
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG+++V + + + T+ G+R K+ GRGG V++I+VR ++M
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSM 386
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 198/408 (48%), Gaps = 57/408 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G V DG+T+N+KA KDAI + GG ++ VP GK++TG +L+S+ +L
Sbjct: 52 NIKDYGAVNDGETNNSKAIKDAIKACNDA---GGGKVIVPKGKYVTGPIHLLSNVNFHLE 108
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A +L ++D + PV+ SY Y+ LI+ ++ VTG GT +GQ
Sbjct: 109 EGAEILFTKDKKAYLPVVH--TSY---EGVELMNYSPLIYAYKQKNIAVTGK-GTFNGQA 162
Query: 237 AL--WW---------------QQFHK---------------------GKLKYTRPYLMEF 258
WW QQ G+ RP E
Sbjct: 163 GKDNWWPWCGAERYGHIEGEPQQKDSVNLPRLRKMNEAGTPVAERVFGEGYQLRPTFFEP 222
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+NI + +T N+P W +HP+ S NI V G+T+ + PN DG +P+ N I++
Sbjct: 223 FECENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYSKNVHIKN 280
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG ++ G +P++ +V+ + + +GSE+S G+++V
Sbjct: 281 CLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCEMKDGHGG-VVMGSEISAGVRNVYV 339
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW-MTGNYGSHADNHYDP 435
+ K + N + +RIKT RGG+V++++V+ + + +K AF + +YG +A+ D
Sbjct: 340 RNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYANQEGD- 398
Query: 436 KALPVIQGINYRDIVADNVSMAARL-EGISGDPFTGICIANATIGMAA 482
+P I+ I+ D+ DN L G P I N I AA
Sbjct: 399 -YMPSIKNIHIEDVKVDNGGKYGILVRGREALPVKNITFKNVVINKAA 445
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 196/417 (47%), Gaps = 64/417 (15%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S +T FG G GK T A + AI+Q + GG ++ VP G +L+G+ L S+ L+
Sbjct: 23 SFDVTAFGADGSGKKDATGAIQKAIDQAHKA---GGGRVAVPEGVFLSGALRLKSNVELH 79
Query: 176 LHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
L + A + SQ+ ++ PV+ R Y+ LI+ ++ +TG GT+DG
Sbjct: 80 LAQGAVIKFSQNPEDYLPVV-----LTRFEGVELYNYSPLIYAYEAENIAITG-KGTLDG 133
Query: 235 QG--ALWW-------------------------------QQFHKGKLKYTRPYLMEFMYT 261
QG WW +QF KG Y RP ++
Sbjct: 134 QGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGH--YLRPNFIQPYRC 191
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+I I + +LNSP W VHPV N+ V GI +I PNTDG+NP+SC N I+ C+
Sbjct: 192 KDILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHF 249
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED- 380
SGDDC+AVKSG + MP++ +VI + + +GSE+SGG+++V AE
Sbjct: 250 DSGDDCIAVKSGRNADARRINMPSENIVIEHNEMKDGHGG-VTIGSEISGGVKNVIAEGN 308
Query: 381 -IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW---AFWMTGNYGSHADNHYDPK 436
+ + N + +RIKT RGG +++IY T+ ++K A M G D
Sbjct: 309 LMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGD------ 362
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIG-----MAAKHKKVP 488
PV++ I+ + + R+ P TG+ + ++ I M KH K P
Sbjct: 363 FKPVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPMELKHVKDP 419
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 211/462 (45%), Gaps = 76/462 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S SITDFG V DG T +T AF+ AI + + GG ++ VP G WLTG L S+ L
Sbjct: 72 YSVSITDFGAVSDGLTKSTAAFEKAI---ADVVAKGGGKVIVPRGMWLTGPIVLKSNINL 128
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ A +L S+D +++P++K + G + R S I G +L +V +TG G IDG
Sbjct: 129 HVEDGALVLFSKDFDDYPLVK---TSFEGLNTF--RCQSPISGRDLENVAITG-KGVIDG 182
Query: 235 QGALW------------WQQFHK--------GKLKY------------------------ 250
G W W+ K GK+ Y
Sbjct: 183 NGDAWRPVKKGKMTESQWKTLLKSGGVLSDDGKIWYPTESSKRGAVTGNFNVPLDLTEKE 242
Query: 251 --------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
RP ++ + + + T NSP+WN+HP+ ++ ++ +T+ P S N
Sbjct: 243 QFEPIKDFMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQN 302
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG++ +SC N+ I + GDD + +KSG D++G G+PT+ ++++ +
Sbjct: 303 GDGLDLESCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNVVYHGHGGF 362
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKW 417
+ +GSEMS G+++V + I T+ G+R K+ GRGG V++IY+ + M + +
Sbjct: 363 V-VGSEMSSGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDMINIPTQAISF 421
Query: 418 AFWMTGNY----GSHADNHYDPKALPVIQGI-NYRDIVADNVSMAARLEGISGDPFTGIC 472
+ GN + K +PV + +++DI N+ +A E ++ +
Sbjct: 422 NLFYGGNSPTMDAEQGGAKKEEKLMPVTEETPSFKDIYMKNIRVAGADEALALQGLPEMN 481
Query: 473 IANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGP 514
+ N I A K T D + G+ + +QGP
Sbjct: 482 LQNVNIENAVLKAKKGITAVD----SDGIVLKNVRVETEQGP 519
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 200/407 (49%), Gaps = 56/407 (13%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG GD +T +++FK AI +LS+ GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K PV+ + Y+ L++ + +V +TG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTKFEGIELYNYSPLVYALDCKNVAITG-SGVLDG 133
Query: 235 QG--ALWW----------------QQFHKGKLK------------------YTRPYLMEF 258
WW QQ KLK Y RP ++F
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
N+ + + ++NSP W VHPV S N++++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVR 377
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDI-YVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
A + +N E +R+KT RGGY+++I ++ + ++ + + Y DN + +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY----DNE-EGE 366
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
LPV++ + +++ A A R+EG+ D I I++ TI AK
Sbjct: 367 YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISD-TIMEGAK 412
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 185/381 (48%), Gaps = 37/381 (9%)
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
G+ D + +T A + A++ + G ++Y+P G + + + T L A L
Sbjct: 12 GIDDDDSLDTAAIQAALDDCAGE----GGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-- 241
QD E+P ++ S G D + + + ++V +TG+ G IDG G+ WW+
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGSYWWEFV 121
Query: 242 ----------------QFHKGKLK------YTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+ +G + RP L++ +N+ +S +TL NSP WN
Sbjct: 122 SLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
H VYS ++ + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G PT+ +V+ T + + +GSE +G ++ V + +T+ G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGG-VVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMA 457
G V+D+ + M + F + G Y + D+ +P +A P ++ +++ I A+ V A
Sbjct: 301 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSEPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 458 ARLEGISGDPFTGICIANATI 478
A L G+ F GI + I
Sbjct: 361 AFLAGLPEQRFEGISFTDVDI 381
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 184/389 (47%), Gaps = 32/389 (8%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I D+ GDG ++T A AI YS+ + + P G++L L S LYL +
Sbjct: 82 IKDYNAAGDGIRNDTAAIHAAI-----YSAPPRSVVIFPRGEYLVEHLFLKSGVDLYLEE 136
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR---------YTSLIFGTNLTDVIVTGDN 229
A L + + + ++K DA + SLI+G ++ V + GD
Sbjct: 137 GAVLRQNPNRDALAIVKGYQKSYDYTDAVINASWEGNPLDCFCSLIYGKDVQQVRIYGD- 195
Query: 230 GTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
GT++G G WW + K Y RP + + +I + LT NS +WN+HP+YSSN+
Sbjct: 196 GTLNGSGMEGGWWNEPKKKNRAY-RPRNVSLVNCSDITVCGLTSQNSAAWNIHPLYSSNL 254
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
G+TI + SPNTDG+NP+SC N I C GDDC+A+KSG + P+++
Sbjct: 255 AFYGLTIQSDPDSPNTDGLNPESCENVEIVGCRFQVGDDCIAIKSGKLFLSRRHLRPSRK 314
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKDI 405
+ +RR + + +GSE+S G+QDV ++ T+ G RIKT GRG V +
Sbjct: 315 ITVRRCL-MEEGHGGVVIGSEISCGVQDVLVQNCLFRRTDRGFRIKTRRGRGSTSVVDGV 373
Query: 406 YVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIVADNVS 455
+ M + F + Y D H D +ALPV +Q I DI AD ++
Sbjct: 374 RFSHVKMEQVSHCFVINMFYHCDPDGHSDLVQCKEALPVGAETPAVQNITLSDICADEIA 433
Query: 456 -MAARLEGISGDPFTGICIANATIGMAAK 483
A L G+ P + + N+ A +
Sbjct: 434 GSAVFLYGLPESPIRNVTVKNSRFRFAQQ 462
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 205/402 (50%), Gaps = 60/402 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+IT +G VGDG+ NT+AF+ AI + GG + VP G++LTG+ +L S L++
Sbjct: 19 TITHYGAVGDGQKMNTEAFRAAIAACHRA---GGGHVLVPEGRFLTGAIHLRSGVDLHVT 75
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A + S D ++ PV+ + R Y+ I+ +V VTG GT+DGQ
Sbjct: 76 EGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAVTGP-GTLDGQA 129
Query: 237 ALW-WQQFHK---------------------------GKLKYTRPYLMEFMYTDNIQISS 268
L W+ +++ G Y RP +++F N+ +S
Sbjct: 130 RLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRCRNVLVSG 189
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
LT+++ P W VHPV S+N+ V+ IT+ + T NTDG +P+ C++ I C + DDCV
Sbjct: 190 LTIVDPPMWTVHPVLSTNVTVRDITVDS--TLYNTDGCDPECCSDVLITGCRFNTNDDCV 247
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTC-ISPYSATIALGSEMSGGIQDVRAEDIKAINT- 386
AVKSG DE G G+P++ +V+R C S + +GSEMSGG++DV AE+ + IN+
Sbjct: 248 AVKSGRDEDGHRVGVPSRNIVVR--DCWFSGRWGGMTVGSEMSGGVRDVFAENCE-INSP 304
Query: 387 --------ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSHADNHYDPKA 437
+ + +K + RGGY+ +++R T +++ A ++ NY N +
Sbjct: 305 DFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVERDAVFVNMNY-----NGGEGGT 359
Query: 438 LPV-IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LPV ++ I+ + D +L G+ D G+ ++ +T
Sbjct: 360 LPVSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTF 401
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 198/406 (48%), Gaps = 41/406 (10%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ SI DFG NT A AI +SQ+ GG ++ +PAG W+TG+ + S+ L
Sbjct: 24 YEVSIIDFGAQCGPDHVNTMAINQAIKAVSQH---GGGKVIIPAGYWMTGAIEMQSNVNL 80
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
YL +AF+ + +++++ ++ + + R + I GT+L ++ +TG +G DG
Sbjct: 81 YLDYNAFVSFTTNISDYRLVDT-----DFEGSPSKRCIAPISGTHLQNIAITG-HGVFDG 134
Query: 235 QGALW------------WQQF--------HKGKL-------KYTRPYLMEFMYTDNIQIS 267
G W W+ F KG + RP L+ F N+++
Sbjct: 135 SGERWRPVKRSKLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLLNFTSCKNVKLE 194
Query: 268 SLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 327
+T NSP+W VHP+ N+ + I + P + N D ++ +SC N I + +GDD
Sbjct: 195 GVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAGDDA 254
Query: 328 VAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTE 387
+ +KSG +E G G+P + + I+ T + + + +GSEMSGG++++ D I T+
Sbjct: 255 ICIKSGKNEAGRRRGVPCENVYIKNNTVLHGHGGFV-IGSEMSGGVKNIYISDCTFIGTD 313
Query: 388 SGVRIKTAVGRGGYVKDIYVRGMTM-HTMKWAFWMTGNYGSH---ADNHYDPKALPVIQG 443
G+R K+A GRGG V++IY+ + M + + A M Y S+ A+ + PV +
Sbjct: 314 VGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKPAERTDVNEGTPVFRN 373
Query: 444 INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPW 489
I ++++ + + L G+ P I I N + A+ + +
Sbjct: 374 IEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRVSKIAETSSINY 419
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 186/390 (47%), Gaps = 33/390 (8%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ + ++ FG GDG +++T A + AI S ++Y+P GK+L S L +
Sbjct: 77 ESFTLNVKRFGAKGDGVSNDTLALQTAI-----MSCPENGRVYIPKGKYLITSLFLKDNL 131
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR--------YTSLIFGTNLTDVI 224
T+ L + A LL + ++ L + + G +TSLI G N+ +V
Sbjct: 132 TIELGEGAELLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKNVR 191
Query: 225 VTGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
+ G G ++GQ + WW+ + + RP + +N+ I + ++NSPSW +HP
Sbjct: 192 IIG-RGCLNGQASKENWWKNPKVKNIAW-RPRSIFLNSCENVVIEGIKIMNSPSWTIHPF 249
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
++N+ + I P SPNTDGI+P+SC N GDDC+A+KSG G
Sbjct: 250 LTNNLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKVLN 309
Query: 343 MPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG-- 399
P+K +I+ C Y + +GSEMSGG++++ E T+ G+RIKT GRG
Sbjct: 310 KPSKNFIIK--NCSMKYGHGGVVIGSEMSGGVENINIEKCDFYKTDKGIRIKTRRGRGEN 367
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDI 449
G + IYV+ ++M +K F Y D Y + LPV I+ I++ +I
Sbjct: 368 GVIDGIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEKLPVDERTPSIKNISFENI 427
Query: 450 VA-DNVSMAARLEGISGDPFTGICIANATI 478
A D + A L G+ P + N +
Sbjct: 428 KAEDTLVCAGFLYGLPEKPIENVKFKNVEV 457
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 188/427 (44%), Gaps = 76/427 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
H+ +ITD+G VGDG NT+AF AI ++ GG L +P G WLTG L S L
Sbjct: 19 HTVTITDYGAVGDGVYDNTQAFHQAIEACAKA---GGGTLVIPPGIWLTGPIKLQSRIEL 75
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG------- 227
+ AF++ S+ ++P++ + +Y GR R S + G L DV +TG
Sbjct: 76 HASAGAFVMFSKFFEDYPIL--MSTY-EGRQMF--RCQSPLDGEGLEDVAITGGGIFDGS 130
Query: 228 ----------------------DNGTIDGQGALWWQ----------------------QF 243
G +D QG LWW Q
Sbjct: 131 GEAWRPVKRGKLTESQWERLIQSGGVVDDQG-LWWPTPAARDGQETLDRIEQTGSEEPQD 189
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
++ Y RP L+ I +S T NS +W +HP S I +Q IT+ P + N
Sbjct: 190 YEPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNG 249
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ DSC +E+ GDD + +KSG +E G G P++++ IR T + I
Sbjct: 250 DGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGG-I 308
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH-----TMKWA 418
+GSEMSGGI+DV D I T+ G+R K+ GRGG V++I + + M + +
Sbjct: 309 VVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISFN 368
Query: 419 FWMTGNYGSHADNHYDPKAL-------PVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ G GS Y + + PV + I +DIV A + G+ P +
Sbjct: 369 LYYEGKAGS---GEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENL 425
Query: 472 CIANATI 478
+ + I
Sbjct: 426 TVKRSAI 432
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 62/350 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +IT FGGVGDG T N++AF AI L + GG L +P G W TG L S+ +
Sbjct: 53 YKVTITQFGGVGDGTTLNSEAFAKAIEALEK---KGGGTLVIPQGIWYTGPIVLKSNIHI 109
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
YL A +L S D + +P++ + G D R S I ++ +TG GTIDG
Sbjct: 110 YLQGGAIILFSDDFDLYPIVH---TSFEGLDTR--RCQSPISAKGAVNIAITG-KGTIDG 163
Query: 235 QGALW-----------------------------WQQFHKGKL----------------- 248
G W W K KL
Sbjct: 164 NGDAWRPVKKSKLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERSDMNVPRGLKTDE 223
Query: 249 ------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
+ RP L+ F+ N+ + +T NSPSWN+HP+ N+ ++ +T+ P S N
Sbjct: 224 EWEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQN 283
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG++ +SC NT + +C GDD + +KSG D G G+P + +++ +
Sbjct: 284 GDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCVVYHGHGGF 343
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ +GSEMSGG++++ + + + T+ G+R K+ GRGG V++I+++ + M
Sbjct: 344 V-VGSEMSGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDM 392
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 196/419 (46%), Gaps = 55/419 (13%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S SI FGG GDGK NT+AF+ AI ++ GG ++ VP G + TG L SH L
Sbjct: 43 SVSILQFGGKGDGKALNTEAFRAAIQACAKA---GGGRVVVPPGTFRTGPIELASHVALI 99
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ K A + AS +++ + PLP+ + D LI GT L D+ + G+ G IDG
Sbjct: 100 VEKGAIIQASDRFSDFGLPDPLPATQQEIDGYKKLLRPLISGTKLDDIAIAGE-GIIDGA 158
Query: 236 GALWWQQFH----------------------------------KGKLKYTRPYLMEFMYT 261
G+ WW + + L RP+L+
Sbjct: 159 GSGWWAKSDKAAERAAAAAKAGESASTKPADSTSPKSEKPAPPEKPLYVPRPFLITLRDC 218
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+ + +TL NSP ++ P + +++V+ +TI +P +PNTDGI+P + + I C I
Sbjct: 219 ARVHLQGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTDGIDPANSRDVLIRRCTI 278
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDI 381
+GDD +AVK G G+A PT+ + + C + +++GSE G+++ +
Sbjct: 279 DTGDDNIAVKGG----GVA-NEPTENVTV--TDCKFLHGHGVSIGSETEAGVRNFLVQRC 331
Query: 382 KAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHADNHYDPK 436
NT + +RIK+ RGG V+++ R +TM ++ A F+ +H + K
Sbjct: 332 AFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIFLFYDDKKAAAHPELAPVTK 391
Query: 437 ALPVIQGINYRDIVADNVS-MAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
P+++ I ++ IV + A L G+ P + + + I AA P+T DI
Sbjct: 392 QTPMVRNITFQKIVCHGTTRKAGELVGLPESPISDVVFDDVHIDGAA----APFTQQDI 446
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 206/432 (47%), Gaps = 63/432 (14%)
Query: 89 LSQRGAESRKARRLDSF--EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQY 146
L+++G + ++A +D + A ++ +G G +T A + AI+ +
Sbjct: 24 LARQGKKDKEANGIDQVLKQIKAPLFPDREFNVVHYGADAKGTELSTDAIQSAIDDAHRL 83
Query: 147 SSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRD 205
G ++ +P G ++TG+ L SH L+LH+ A++ SQ+ ++ P++ R
Sbjct: 84 K---GGRVLIPEGTFVTGALELKSHVELHLHEKAYVAFSQNRKDYLPLV-----LTRYEG 135
Query: 206 AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW----------------------- 240
Y+ LI+ + ++ +TG GT+DG+G WW
Sbjct: 136 VELYNYSPLIYAHHAENIAITG-AGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFDMA 194
Query: 241 ------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
++ G+ Y R ++ + I +T+ +SP W +HPV S ++V+G+ I
Sbjct: 195 EKRIPVEERVFGEGHYLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSELVIVRGVHI 254
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
I PNTDG+NP+SC N IEDCY +GDDC+A+KSG +E G G+P++ +VIRR
Sbjct: 255 IG--HGPNTDGVNPESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRRNE 312
Query: 355 CISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + +GSE+SGG++ + AE+ + + N + +RIKT RGG ++ IY + T+
Sbjct: 313 MRDGHGG-VTIGSEISGGVRYIYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTV 371
Query: 413 HTMKWA------FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
++K + G+ G H PV++ I + + ++ S
Sbjct: 372 KSLKHEVVCIDMMYEEGDAGPHR---------PVVRHIQVEGLKSSGGRYGVKIAAYSHS 422
Query: 467 PFTGICIANATI 478
P T + N I
Sbjct: 423 PVTNFNMKNCVI 434
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 196/429 (45%), Gaps = 58/429 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISH-FTLYL 176
++ FG VG+G+ + ++AF A+ LS DGG L++ G +LTG ++ + L L
Sbjct: 5 TLKSFGAVGNGQQNESEAFAKALAALS----DGGV-LHIEEGTYLTGPLHIQAKGLVLEL 59
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A + D N + P Y R + N +IV G+ G IDG G
Sbjct: 60 DRGAVIQFIADENLY-----TPVYSRWEGVNCYCMHPCLLIENSDGLIVRGE-GIIDGNG 113
Query: 237 ALWWQQFHKGK--------------------------------LKYTRPYLMEFMYTDNI 264
WW HK + ++ RP L++ + ++N+
Sbjct: 114 QWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNNV 173
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
++ LTL NSP W +HP+YS+N++ + ++ P +PNTDGI+ DSC I+ C + G
Sbjct: 174 KLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDVG 233
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI 384
DD +A+KSG G+A PT ++I T S + + +GSE + GI+DVR D
Sbjct: 234 DDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGAV-IGSETAAGIRDVRVHDCLFD 292
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHYDPKAL---- 438
T+ G+RIKT GRGG + +++ + M + Y GS + + L
Sbjct: 293 GTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQDFSLEKLSITD 352
Query: 439 --PVIQGINYRDIVA-DNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIG 495
P I+G+ D + D S AA + G+ P + I N T +A K T D
Sbjct: 353 TTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRNCTFTVA----KTGLTPVDES 408
Query: 496 GMTSGVTPP 504
M G+ P
Sbjct: 409 EMYEGLPEP 417
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 194/429 (45%), Gaps = 77/429 (17%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
S+ DFG VG+G T+AF+ AI LS S GG L VPAG WLTG L S+ L++
Sbjct: 49 VSLPDFGAVGNGVELCTEAFEKAIETLS---SRGGGHLIVPAGIWLTGPIVLKSNIDLHI 105
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K A +L S D+ +P+++ + G D R S + G NLT+V +TG G IDG G
Sbjct: 106 EKGAVVLFSPDVELYPLVE---TVFEGLDTR--RCQSPVSGRNLTNVAITGQ-GAIDGNG 159
Query: 237 ALW------------WQQ-FHKGKL----------------------------------- 248
W W+Q +G +
Sbjct: 160 HFWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEWQ 219
Query: 249 ---KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+ RP ++ + N+ + + NSP+WN+HP+ N+L++ + + P + N DG
Sbjct: 220 SVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDG 279
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
++ +SC N I + GDD + +KSG DE G + +V+ T + + +
Sbjct: 280 LDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCTVFKGHGGFV-V 338
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWAFW 420
GSEMSGG+++V + + + T+ G+R K+ GRGG V++I+VR ++M + + +
Sbjct: 339 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNLY 398
Query: 421 MTG-------NYGSHADNHYDP----KALPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
G G DP + P + I+ ++V N A GI P
Sbjct: 399 YGGKSAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPID 458
Query: 470 GICIANATI 478
GI + N I
Sbjct: 459 GITLENLDI 467
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 183/381 (48%), Gaps = 37/381 (9%)
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
G+ D + +T+A + A++ + G ++Y+P+G +L+ + TL + A L
Sbjct: 35 GIEDDDSLDTEAIQAALDDCAGE----GGEVYLPSGTYLSAPLRVGDDTTLRVANGAELR 90
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
D E+P ++ R + ++ + +V +TG+ G +DG G+ WW
Sbjct: 91 FVGDFREFPTVE-----SRWEGWNQDGFHPCLYVADAENVTITGE-GVVDGGGSHWWDLV 144
Query: 244 HKGKLKY------------------------TRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+ ++ RP L++ +N+ +S +TL NSP WN
Sbjct: 145 ETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVSGVTLRNSPFWNT 204
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
H VYS ++ + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 205 HVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 264
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G PT+ +V+ T + + +GSE +G ++ V + +T+ G+RIK+ GRG
Sbjct: 265 EVGRPTENVVVTNCTVEHGHGG-VVVGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 323
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMA 457
G V+D+ + M + F + G Y + D+ P +A P ++ +N+ I A+ V A
Sbjct: 324 GTVEDLRFDTIVMRRVACPFVLNGYYQTDIDSDPKPVDEATPNVRNVNFHHITAEEVESA 383
Query: 458 ARLEGISGDPFTGICIANATI 478
A L G+ F GI + I
Sbjct: 384 AFLAGLPERRFEGISFTDVDI 404
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 182/368 (49%), Gaps = 33/368 (8%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ ++ DFG GDG +T + A+ + S ++ VPAG + S L + +
Sbjct: 92 TLNVRDFGAKGDGIQDDTLFIQSAVMACPKDS-----RVLVPAGTYRIVSLFLKDNVKIE 146
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDA---------AAGRYTSLIFGTNLTDVIVT 226
L K A L A D + +PV+K + G+D +++++ G N+ + ++
Sbjct: 147 LEKGAVLSADTDRSRFPVLKGMIKSFDGKDEYNLGTWEGDPLPMFSAVVTGINIENAVIY 206
Query: 227 GDNGTIDGQGAL----WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
G G I+G WW + K + RP ++ ++ I LTL NSPSWN+HP
Sbjct: 207 G-RGVIEGNAGFGEENWWHDPKRMKTAF-RPRMVFLERCKHVVIQGLTLRNSPSWNIHPY 264
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
+S ++ + +++P SPNTDG++P+SC + I GDDC+AVKSG G Y
Sbjct: 265 FSEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVKSGKIYMGTTYK 324
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--G 400
P++ +V+ R C+ ++ +GSEM+GG++++ D +T+ G+RIKT GRG
Sbjct: 325 RPSEDIVVSR-CCMRDGHGSVTIGSEMAGGVKNLTVRDCVFRHTDRGLRIKTRRGRGKNA 383
Query: 401 YVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIV 450
V I + M +K F + Y D + + + LPV I+ + +RDI
Sbjct: 384 VVDGILFERIHMDQVKTPFVINSFYYCDPDGNSEYVRTKERLPVDDRTPWIKHLTFRDIE 443
Query: 451 ADNVSMAA 458
A N +AA
Sbjct: 444 AVNCHVAA 451
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 175/355 (49%), Gaps = 46/355 (12%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S+ ++GG+G+G T NT+AF AI LS+ GG L VP G WLTG L S+ L+
Sbjct: 49 EVSLAEYGGIGNGMTLNTQAFAAAIADLSER---GGGHLIVPEGIWLTGPIVLKSNIDLH 105
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ K+A +L + D ++P++ P + R S I + ++ +TG+ G DG
Sbjct: 106 VLKNAIVLFTPDKTQYPLLSP------DEGTSGSRCQSPISAYHESNFSITGE-GVFDGN 158
Query: 236 GALW------------WQQFHKG------------------KLKYTRPYLMEFMYTDNIQ 265
G LW W F K KL RP ++ F+ + +
Sbjct: 159 GELWRPVKRFKVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVL 218
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ + NSPS++V+ + S NI+V GI + P + N DGI+ SCTN I +C + +GD
Sbjct: 219 LQGVVFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGD 278
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
D + +KSG + G G P ++I T + + +GS+ GGI V + + I+
Sbjct: 279 DAICLKSGIGDVGRRRG-PCANIIIDNCTVFHGHGGFV-IGSDTGGGIDRVSVRNCRFID 336
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKALP 439
T++G+R K+ GRGG V ++YV + M+ + +A W Y + +P +P
Sbjct: 337 TDTGLRFKSKRGRGGVVSNVYVDNIMMNDIANYAIWFDSYY---QEKTPEPDGIP 388
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 184/381 (48%), Gaps = 37/381 (9%)
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
G+ D + +T A + A++ + G ++Y+P G + + + T L A L
Sbjct: 12 GIDDDDSLDTAAIQAALDDCAGE----GGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-- 241
QD E+P ++ S G D + + + +V +TG+ G IDG G+ WW+
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADAENVTITGE-GVIDGGGSYWWEFV 121
Query: 242 ----------------QFHKGKLK------YTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+ +G + RP L++ +N+ +S +TL NSP WN
Sbjct: 122 SLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
H VYS ++ + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G PT+ +V+ T + + +GSE +G ++ V + +T+ G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGG-VVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMA 457
G V+D+ + M + F + G Y + D+ +P +A P ++ +++ I A+ V A
Sbjct: 301 GTVEDLRFDTIAMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 458 ARLEGISGDPFTGICIANATI 478
A L G+ F GI + I
Sbjct: 361 AFLAGLPEQRFEGISFTDVDI 381
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 184/370 (49%), Gaps = 43/370 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ DFG GDG +T + AI + S ++ +PAG + S L + L +
Sbjct: 84 VRDFGAKGDGIQDDTLFIQAAIMACPEKS-----RVLIPAGTYRIVSLFLKDDVNIELAE 138
Query: 179 DAFLLASQDLNEWPVIKPL-PSYGRGRDAAAG--------RYTSLIFGTNLTDVIVTGDN 229
A L A D +PV + + SY + G +T +I G N+ ++ G
Sbjct: 139 GAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIINGVNVKGAVIYG-Q 197
Query: 230 GTIDGQGA----LWWQQFHKGKLKYT--RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
GTIDG WW H+ K+ +T RP ++ + + +T+ NSPSWN+HP +
Sbjct: 198 GTIDGNAGDSEGNWW---HEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHPYF 254
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
S ++ + ++ P SPNTDG++P+SC + I Y GDDC+AVKSG G Y
Sbjct: 255 SDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKR 314
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
P+K + IRR C+ ++ +GSEM+GG++++ +D ++T+ G+RIKT GRG K
Sbjct: 315 PSKDISIRR-CCMRDGHGSVTIGSEMAGGVKNLTVKDCMFLHTDRGLRIKTRRGRG---K 370
Query: 404 DIYVRGMTMHTMKWAFWMT-----GNYGSHADNHYD----PKAL------PVIQGINYRD 448
D V G+ ++ MT Y D H + +AL P+I+ + ++D
Sbjct: 371 DAVVDGIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALLVDERTPLIKSLCFKD 430
Query: 449 IVADNVSMAA 458
I A+N +AA
Sbjct: 431 IEAENCHVAA 440
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 189/406 (46%), Gaps = 56/406 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T +G VGDG+T T AF+ AI + GG ++ VP G +LTG +L S+ L+L
Sbjct: 59 LTRYGAVGDGRTDCTDAFRQAIEACHRA---GGGRVVVPRGTFLTGPIHLASNVNLHLDD 115
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
A + QD + PV+ + R Y+ I+ +V +TG +G +DGQ
Sbjct: 116 GATVRFKQDPAAYLPVV-----FTRWEGVEGMNYSPFIYAFGQENVAITG-SGVLDGQAD 169
Query: 237 -ALWW----------------------------------QQFHKGKLKYTRPYLMEFMYT 261
WW +Q G+ Y RP ++F
Sbjct: 170 ENHWWPWKGRKEYGWREGMPTQDEARRRLFEMAEAGVPPEQRILGEGSYLRPNFIQFYRC 229
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
N+ I +T++NSP W +HPV N+ V+G+T+ + PN DG NP+SC IEDC
Sbjct: 230 RNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPESCRYVLIEDCLF 287
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE-- 379
+GDDC+A+KSG + G +P+ +VIR + + +GSE+SGG + AE
Sbjct: 288 DTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRDGHGGVV-IGSEISGGAHHIYAERC 346
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD-NHYDPKAL 438
++ + N + +RIKT RGG ++ IY+R + + + A Y D +D
Sbjct: 347 EMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRVNFYYEEGDAGPFD---- 402
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKH 484
P+++ I R++ + A L G + P + + + T K+
Sbjct: 403 PIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGVEKN 448
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 196/431 (45%), Gaps = 77/431 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ ++ +F VG+G+T T AF DAIN LS+ GG L VPAG WLTG L S+ L
Sbjct: 58 RTVNLKEFNAVGNGETLCTSAFADAINALSE---QGGGHLVVPAGVWLTGPIVLKSNIDL 114
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K A +L S D++ +P+++ + G D R S I G NL +V +TG+ G IDG
Sbjct: 115 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGE-GAIDG 168
Query: 235 QGALW------------WQQF---------------HKGKLK------------------ 249
G W W+Q + LK
Sbjct: 169 NGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLKTEEE 228
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ + N+ + + NSP+WN+HP+ N+LV+ + + P + N
Sbjct: 229 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNG 288
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + +KSG DE G P + +V+ T + +
Sbjct: 289 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFV 348
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWA 418
+GSEMSGG+++V + + + T+ G+R K+ GRGG V++I++ ++M + +
Sbjct: 349 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFN 407
Query: 419 FWMTG-------NYGSHADNHYDP----KALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+ G G DP + P + I+ +++V A GI P
Sbjct: 408 LYYGGKSAVEVLESGEKVPAKVDPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMP 467
Query: 468 FTGICIANATI 478
+ + + I
Sbjct: 468 IENVVLEDVDI 478
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 181/364 (49%), Gaps = 32/364 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG VGDGK +T + + AI DGG ++Y P G +LT L S+ T+ L
Sbjct: 85 NVKDFGAVGDGKRLDTFSIQAAI----MACPDGG-RVYFPEGVYLTYPIFLKSNITIELG 139
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR--------YTSLIFGTNLTDVIVTGDN 229
K A LL ++ +P++ ++ G + SLI G ++ +V + GD
Sbjct: 140 KGAVLLGAKGREMYPILPGEIDSQEFKNGYLGSWEGETNNMFASLITGISVENVNIIGD- 198
Query: 230 GTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
G IDG + WWQ ++ + RP + N+ I +T+ NSPSW +HP+ S N+
Sbjct: 199 GIIDGNSSFDTWWQDAKVKRIAW-RPRTVYLNKCKNVLIEGITIKNSPSWTIHPLMSQNL 257
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
+ I P +PNTDG++P+SC + I GDDC+A+KSG MP++
Sbjct: 258 KFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMPSEN 317
Query: 348 LVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
L+IR C+ Y + +GSEMSGG+++V E+ T+ G+RIKT GRG G + +
Sbjct: 318 LIIR--NCLMEYGHGAVVIGSEMSGGVKNVHVENCIFRKTDRGIRIKTRRGRGKTGVIDE 375
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDIVADNV 454
I+ + M + F + Y AD + + LPV + I +DI +
Sbjct: 376 IHASNIRMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYVGNIYLKDITCIDT 435
Query: 455 SMAA 458
+AA
Sbjct: 436 QVAA 439
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 141/254 (55%), Gaps = 1/254 (0%)
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN-TDGINPDSCT 312
+L F+ D + I + + P P Y I + G + + N TD + DSC+
Sbjct: 87 HLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITDSCS 146
Query: 313 NTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG 372
N IED I D +++KSGWD YGI G P + I R+ + A +A GSEMSGG
Sbjct: 147 NMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGG 206
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
I D+ + + + G+ KTA GRGGY++D+ + + M + A TG++ +H DNH
Sbjct: 207 ISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNH 266
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
+DP ALP+I I +++V N+S+A L GI+GDPFT IC++N + +A + W+C+
Sbjct: 267 FDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCS 326
Query: 493 DIGGMTSGVTPPPC 506
+I G + V P PC
Sbjct: 327 NISGYSELVFPEPC 340
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 86/112 (76%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
HS +I++FG VGDG T NT F++AI L ++ GGAQLYVP G+WLTGSFNL SH T+
Sbjct: 31 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 90
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+L KDA ++ +++++EWP+++PLPSYG+G D R+ SLI G N+TDV++T
Sbjct: 91 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVIT 142
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 193/387 (49%), Gaps = 36/387 (9%)
Query: 109 AISCRAHSASIT----------DFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPA 158
A+ +AH+ +T DFG +GDG T T++ + I++ GG ++ +PA
Sbjct: 32 ALEKKAHTTPVTAAPSVQLNVRDFGAIGDGITLETESLQRTIDRCGVL---GGGEVIIPA 88
Query: 159 GKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGT 218
G++LTGS +L + TL L + +L S DL + V S R Y LI
Sbjct: 89 GRYLTGSVSLRTKVTLRLAAECVILGSPDLAHYAV-----SQVRWEGKWIPGYLGLIHAL 143
Query: 219 NLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWN 278
+ + V G G+I+G A+ + + L+ RP L+EF+Y D++ + + + W+
Sbjct: 144 DARKIAVLGP-GSIEGNVAVAGRPTKENPLR--RPALIEFLYCDDVHLEGFSTSYAHMWS 200
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+HP N++ + +T+ + +T N DGI+ DSC + I+ C I SGDDC+++KSG E
Sbjct: 201 IHPTCCDNLVFRNLTVRSTLT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEA 258
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT-ESGVRIKTAVG 397
PT+ + I T A I +GSE S GI+ V E + + + V IK+ VG
Sbjct: 259 YQLARPTEDVRIVNCTLEGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFAVYIKSRVG 318
Query: 398 RGGYVKDIYVRGMTMHTMKWAFW-MTGNYGSHADNHYDP--KALPVIQGINYRDIVADN- 453
RG +++D+ VR M+ M+ F ++ D + P LP+ + I++ I D+
Sbjct: 319 RGAFIEDLTVRDMSAAKMRMGFLKISQTSAGVQDENPVPGLDGLPLFRNISFLRIHVDDA 378
Query: 454 --------VSMAARLEGISGDPFTGIC 472
+S L+G++ D FTG C
Sbjct: 379 PVLVEAKEISADKLLDGLTLDGFTGTC 405
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 183/368 (49%), Gaps = 30/368 (8%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
++ ++ DFG GDG +T A + +I + ++ VP G++L L S+
Sbjct: 52 ESYVLNVKDFGAKGDGLELDTAAVQASIAACPLH-----GRIIVPKGRYLLTPIFLKSNI 106
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR--------YTSLIFGTNLTDVI 224
T+ L + A LL +QD N++P++ L + G + SLI G N+ +V
Sbjct: 107 TIELEEGAVLLGAQDRNKYPILPGLLKGSSKEEYFLGSWEGDPDDCFASLITGINVENVN 166
Query: 225 VTGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
+ G NG IDG ++ WW + K ++ + RP ++ + NI + S+T+ NSPSW +HP+
Sbjct: 167 IIG-NGIIDGNASIDNWWFEAKKKRIAW-RPRMIFLVGCKNILVESVTVKNSPSWTIHPL 224
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
S ++ + I P SPNTDG++P+SC N I GDDC+A+KSG
Sbjct: 225 MSEDLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISKIKT 284
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--G 400
MP++ + IR + A + LGSEMS GI ++ E+ T+ G+RIKT GRG
Sbjct: 285 MPSQHIYIRNCNMNFGHGA-VVLGSEMSSGINNIYVENCLFNETDRGIRIKTRRGRGDTA 343
Query: 401 YVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDIV 450
+ +IY R + M+ + F + Y D + + LP+ I I ++I
Sbjct: 344 IIDEIYARNIKMNKVLTPFTINCFYFCDIDGKTEYVWSKEKLPIDDKTPYIGNIYLQNIT 403
Query: 451 ADNVSMAA 458
N +AA
Sbjct: 404 CLNAQVAA 411
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 199/433 (45%), Gaps = 77/433 (17%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +I +G DG T NT+A AI + SQ GG + +P G WLTG L S+
Sbjct: 266 RKDTFNIARYGSKADGITLNTQAINQAITRCSQA---GGGTVLIPEGLWLTGPLVLRSNV 322
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L A L S++ +++P++ + G+DA R + I+G +L +V +TG +G I
Sbjct: 323 NLHLASGALLQFSRNRDDYPIVA---TTWEGQDAY--RCQAPIWGVDLVNVAITG-SGVI 376
Query: 233 DGQGALW------------WQQF----------------HKGKLK--------------- 249
DG G +W W + G +K
Sbjct: 377 DGGGEVWRAVKKSKQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIANGKT 436
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP ++ + + +T NSP+W +HP+ ++ ++G+T+ +
Sbjct: 437 PAELTEIRDFLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYA 496
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N DG++ +SC N +E+C +GDD + +KSG DE G G+PT+ +IR +
Sbjct: 497 QNGDGVDLESCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAHG 556
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
+ +GSEMSGG++++ + + + T+ G+R KTA GRGG V++IYV ++M +
Sbjct: 557 GFV-IGSEMSGGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAI 615
Query: 421 MTGNYGSHAD---NHYDPKALPVIQGI-------NYRDIVADNVSMAAR-----LEGISG 465
+ Y + D D LP I+G +R NVS + G+
Sbjct: 616 LFDMYYAAKDPVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPE 675
Query: 466 DPFTGICIANATI 478
P + I I NA +
Sbjct: 676 MPVSNILIENAVL 688
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 198/399 (49%), Gaps = 56/399 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ +FGG + NT AFK AI + S GG ++ VPAG++ TG+ +L S+ L++
Sbjct: 54 NLLEFGG--KEGSDNTLAFKKAI---AACSKAGGGKVVVPAGRFETGAIHLESNVNLHIS 108
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A + D + LP+ + R Y+ LI+ T++ +TG GT+DGQ
Sbjct: 109 EGATIAFFTDPKYY-----LPAVFTRWEGMECMGYSPLIYAYGKTNIAITGK-GTLDGQA 162
Query: 237 --ALWW---------------QQFHKGKL------------------KYTRPYLMEFMYT 261
WW Q+ + +L Y RP ++
Sbjct: 163 DPTHWWAWKGNKEWGVEGYPSQKESRNQLFAQAEAGDPVRERVYADGHYLRPSFVQPYKC 222
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+N+ I +T++N+P W +HP S N+ V+G+ + + PN+DG +P+SC N IE+C+
Sbjct: 223 ENVLIEDITIINAPFWLLHPTLSQNVTVRGVHLES--LGPNSDGCDPESCKNVVIENCFF 280
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED- 380
+GDDC+A+KSG + G PT+ ++IR + + + +GSE+SGG+++V AE+
Sbjct: 281 NTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEAGHGGVV-IGSEISGGVRNVFAENN 339
Query: 381 -IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALP 439
+ + + E G+RIKT RGG +++IYVR T+ ++ A + Y +D P
Sbjct: 340 VMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEEGDAGKFD----P 395
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
++ + R++V + + G P I ++T
Sbjct: 396 TVRNVEIRNLVCQHALQVFNIRGFERAPIQNFRIIDSTF 434
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 206/421 (48%), Gaps = 63/421 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I+DFG VGDG T ++A K AI ++ GG ++ VP G + TG L S+ L+L K
Sbjct: 60 ISDFGAVGDGSTDASQAIKSAIQACAEA---GGGKVVVPPGDYPTGPIYLESNVNLHLEK 116
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
DA L+ S D ++ P++ Y R Y+ L++ ++ +TG+ G +DGQ
Sbjct: 117 DARLMFSTDPKDYLPLV-----YTRWEGVELMNYSPLVYAFEEENIAITGE-GILDGQAN 170
Query: 237 -ALWW------------------------------------QQFHKGKLKYTRPYLMEFM 259
WW ++ G+ Y RP ++
Sbjct: 171 ETNWWPWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFYLRPQFVQPY 230
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
N+ + + ++NSP W ++PV N+ ++G+T+ + PN+DG +P+S N I+DC
Sbjct: 231 RCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDPESSKNVLIKDC 288
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
Y +GDDC+A+KSG + G +P++ ++I+ + + +GSE+SGG+++V AE
Sbjct: 289 YFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHGGVV-IGSEISGGVRNVFAE 347
Query: 380 --DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA 437
++ + + + +RIKT+ RGG ++DIY+R + + + + + +
Sbjct: 348 NCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNMFYEDSGAY----- 402
Query: 438 LPVIQGINYRDIVADN-VSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGG 496
+P ++ I+ ++ +N + LEG P I + N I K+ + +T +++ G
Sbjct: 403 VPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNI----KNAEEAYTFSNVKG 458
Query: 497 M 497
+
Sbjct: 459 V 459
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ ++ +F VG+G+T T AF DAIN LS+ GG L VPAG WLTG L S+ L
Sbjct: 48 RTVNLAEFNAVGNGETLCTSAFADAINTLSE---QGGGHLVVPAGVWLTGPIVLKSNIDL 104
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K A +L S D++ +P+++ + G D R S I G NL +V +TG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGE-GAIDG 158
Query: 235 QGALW------------WQQF---------------HKGKLK------------------ 249
G W W+Q + LK
Sbjct: 159 NGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLQTEEE 218
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ + N+ + + NSP+WN+HP+ N+LV+ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNG 278
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + +KSG DE G P + +V+ T + +
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFV 338
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG+++V + + + T+ G+R K+ GRGG V++I++ ++M
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSM 386
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 37/381 (9%)
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
G D + +T A + A++ + G ++Y+P G + + + TL L A L
Sbjct: 5 GTDDDDSLDTAAIQAALDDCAGE----GGEVYLPPGTYRSAPLRVGDDTTLRLANGAELR 60
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
QD E+P ++ G +D + + + +V +TG+ G IDG G+ WW+
Sbjct: 61 FVQDFTEFPTVESR-WEGWNQDG----FHPCLHVADAANVTITGE-GVIDGGGSYWWEFV 114
Query: 244 HKGKLKY------------------------TRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+Y RP L++ +N+ +S +TL NSP WN
Sbjct: 115 SVPPEEYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 174
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
H VYS ++ V ++I P +PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 175 HVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 234
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G PT+ +V+ T + + +GSE +G ++ V + +T+ G+RIK+ GRG
Sbjct: 235 EVGRPTENVVVTNCTVEHGHGGVV-IGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 293
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMA 457
G V+D+ + M + F + G Y + D+ +P +A P ++ +++ I A+ V A
Sbjct: 294 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 353
Query: 458 ARLEGISGDPFTGICIANATI 478
A L G+ F GI + I
Sbjct: 354 AFLAGLPERRFEGISFTDVDI 374
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 186/399 (46%), Gaps = 42/399 (10%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ S+ DFG VGDG +T + + A+N L G +L P G +LTG NL SH T+
Sbjct: 76 AVSVKDFGAVGDGVADDTLSIQTAVNCLP-----AGGRLRFPEGTYLTGPINLKSHITIE 130
Query: 176 LHKDAFLLASQDLNEWP----VIKPLPS-----YGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+ A LL + D+ +P VI L + +G A + +L+F D+ +
Sbjct: 131 FTEKATLLGTTDMARYPKIPGVITDLVTGEEVHFGTWEGNAVPMHQALLFAEYAEDIKIV 190
Query: 227 GDNGTIDG--QGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
G GT+DG Q + WW ++ RP L+ F + + +T N+ SW +HP +S
Sbjct: 191 G-RGTVDGNAQNSQWWVDVKNQEVP--RPRLIFFNRCKLVTVHGITAQNAASWQLHPYFS 247
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
+ + +++ AP SPNTD ++P++C I C GDDC+A+KSG E G + P
Sbjct: 248 TELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQP 307
Query: 345 TKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ IR CI + I LGSEM+GG++++ T+ G+RIKT GRG K
Sbjct: 308 ANRHTIR--NCIMQFGHGAITLGSEMAGGVKNLSVSRCIFKETDRGLRIKTRRGRG---K 362
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP----------KALPV------IQGINYR 447
D + G+ +K +T + N DP + LPV + +R
Sbjct: 363 DAVIDGIEFKNIKMDGVLTPIVMNMWYNCCDPDRYSEYNTTREKLPVDDRTPYLGKFTFR 422
Query: 448 DIVADNVSMAA-RLEGISGDPFTGICIANATIGMAAKHK 485
D+ N +AA +G+ P I + N A K
Sbjct: 423 DMECLNCHVAACYCDGLPEMPIDEITVDNIKFTYAENAK 461
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 206/440 (46%), Gaps = 45/440 (10%)
Query: 86 VALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQ 145
V++ + G E + ++E+ ++ R DFG GDGK +TK + AI +
Sbjct: 59 VSVRTADGTELGTVSFVTAYEFVTLNVR-------DFGATGDGKQDDTKFIQAAILACPK 111
Query: 146 YSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL-PSYGRGR 204
S ++ +P G + S L S+ L L K A L+A D +P + SY
Sbjct: 112 ES-----RVLIPKGSYRITSLFLKSNLRLELAKGAELIADTDRAAYPKFPGMIESYDEQG 166
Query: 205 DAAAG--------RYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHKGKLKYTRPY 254
+ G + +I G ++ +V++ G GTI+G + WW+ K + RP
Sbjct: 167 EYNLGTWEGNPLPMFAGIITGLDVENVLIYG-RGTINGNASKENWWKN-PKVMVGAFRPR 224
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L + N+ + +T NSPSW +HP +S N+ G+TI P SPNTDG++P+SC N
Sbjct: 225 LFFLSHCQNVTLCGVTFKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNV 284
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I GDDC+AVKSG G Y P++ + IR+ + + A + +GSEM+GG++
Sbjct: 285 DIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENGHGA-VTVGSEMAGGVK 343
Query: 375 DVRAEDIKAINTESGVRIKTAVGRG--GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
++ E+ + +T+ G+RIKT GRG + I R + M + F + Y D
Sbjct: 344 NLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGK 403
Query: 433 YD----------PKALPVIQGINYRDIVADNVSMAAR-LEGISGDPFTGICIANATIGMA 481
+ P I +++ DI A N +AA +G+ I + N T+ A
Sbjct: 404 TEFVQSREKMPVDDGTPAILRLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYA 463
Query: 482 AKHKKVPWTCADIGGMTSGV 501
K + + M+SGV
Sbjct: 464 KNPK------SGVPAMSSGV 477
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 187/377 (49%), Gaps = 31/377 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDG T T + + A+++ + GG ++ +PAG++LTG +L S TL L
Sbjct: 51 NVRDFGATGDGSTLETASLQQALDRCNVL---GGGEVLIPAGRYLTGGLSLRSRVTLRLD 107
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
KDA LL S DL +PV + R YT+L+ + ++ + G+ G I+G A
Sbjct: 108 KDATLLGSPDLAHYPVAQV-----RWEGKWIPGYTALLHALDARNIAIVGE-GKIEGNEA 161
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+ + L+ RP L+EF+ D + + ++ + W++HP N++ + +TI +
Sbjct: 162 VAGRPTKDNPLR--RPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFRNLTIRS- 218
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
T N DGI+ DSC + I+ C I SGDDC+++KSG E PT+ + I T
Sbjct: 219 -TKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTLEG 277
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINT-ESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
A + +G+E S GI++V E + + + IK+ +GRG +++++ VR M M+
Sbjct: 278 RGFACLGIGTESSAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAFIENLTVRDMDAARMR 337
Query: 417 WAFWMTG--NYG-SHADNHYDPKALPVIQGINYRDIVADNVSMAAR-------------- 459
F N G AD + LP+ + + +I + +
Sbjct: 338 MGFLRIDQTNAGIQDADPVPGLEGLPLFRNFRFENIRVQDAPVLVEAINTDSGKMLDGLV 397
Query: 460 LEGISGDPFTGICIANA 476
L+GISG GI IANA
Sbjct: 398 LQGISGTCAKGISIANA 414
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 191/427 (44%), Gaps = 77/427 (18%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ DFG VG+G T AF AI LS + GG L VPAG WLTG L S+ L++ K
Sbjct: 51 LPDFGAVGNGVELCTDAFAKAIETLS---ARGGGYLIVPAGIWLTGPIVLKSNINLHIEK 107
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L S D+ +P+++ + G D R S I G NLT+V +TG G IDG G
Sbjct: 108 GAVILFSPDVELYPLVE---TVFEGLDTR--RCQSPISGRNLTNVAITGQ-GAIDGNGHY 161
Query: 239 W------------WQQ-FHKGKL------------------------------------- 248
W W+Q +G +
Sbjct: 162 WRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSV 221
Query: 249 -KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGIN 307
+ RP ++ + N+ + NSP+WN+HP+ N+L++ I + P + N DG++
Sbjct: 222 RHFLRPVMVSLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGDGLD 281
Query: 308 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGS 367
+SC N I + GDD + +KSG DE G P + +V+ T + + +GS
Sbjct: 282 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFV-VGS 340
Query: 368 EMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWAFWMT 422
EMSGG+++V + + + T+ G+R K+ GRGG V++I++R ++M + + +
Sbjct: 341 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNLYYG 400
Query: 423 G-------NYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
G G DP + P + I+ ++V N A GI P GI
Sbjct: 401 GKSAVEVLESGEKIPAKVDPLPVDDTTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGI 460
Query: 472 CIANATI 478
+ N I
Sbjct: 461 TLDNLDI 467
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 206/440 (46%), Gaps = 45/440 (10%)
Query: 86 VALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQ 145
V++ + G E + ++E+ ++ R DFG GDGK +TK + AI +
Sbjct: 59 VSVRTADGTELGTVSFVTAYEFVTLNVR-------DFGATGDGKQDDTKFIQAAILACPK 111
Query: 146 YSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL-PSYGRGR 204
S ++ +P G + S L S+ L L K A L+A D +P + SY
Sbjct: 112 ES-----RVLIPKGSYRITSLFLKSNLRLELAKGAELIADTDRAVYPKFPGMIESYDEQG 166
Query: 205 DAAAG--------RYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHKGKLKYTRPY 254
+ G + +I G ++ +V++ G GTI+G + WW+ K + RP
Sbjct: 167 EYNLGTWEGNPLPMFAGIITGLDVENVLIYG-RGTINGNASKENWWKN-PKVMVGAFRPR 224
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L + N+ + +T NSPSW +HP +S N+ G+TI P SPNTDG++P+SC N
Sbjct: 225 LFFLSHCQNVTLCGVTFKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNV 284
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I GDDC+AVKSG G Y P++ + IR+ + + A + +GSEM+GG++
Sbjct: 285 DIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENGHGA-VTVGSEMAGGVK 343
Query: 375 DVRAEDIKAINTESGVRIKTAVGRG--GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
++ E+ + +T+ G+RIKT GRG + I R + M + F + Y D
Sbjct: 344 NLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGK 403
Query: 433 YD----------PKALPVIQGINYRDIVADNVSMAAR-LEGISGDPFTGICIANATIGMA 481
+ P I +++ DI A N +AA +G+ I + N T+ A
Sbjct: 404 TEFVQSREKMPVDDGTPAILRLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYA 463
Query: 482 AKHKKVPWTCADIGGMTSGV 501
K + + M+SGV
Sbjct: 464 KNPK------SGVPAMSSGV 477
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 183/381 (48%), Gaps = 37/381 (9%)
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
G+ D + +T A + A++ + G ++Y+P G + + + T L A L
Sbjct: 49 GIEDDDSLDTAAIQAALDDCAGE----GGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 104
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW--- 240
QD E+P ++ S G D + + + ++V +TG+ G IDG G+ WW
Sbjct: 105 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGSYWWVFV 158
Query: 241 ---------------QQFHKGKLK------YTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
++ G + RP L++ +N+ +S +TL NSP WN
Sbjct: 159 SLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 218
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
H VYS ++ + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 219 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 278
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G PT+ +V+ T + + +GSE +G ++ V + +T+ G+RIK+ GRG
Sbjct: 279 EVGRPTENVVVTNCTVEHGHGG-VVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 337
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMA 457
G V+D+ + M + F + G Y + D+ P +A P ++ +++ I A+ V A
Sbjct: 338 GTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITAEEVESA 397
Query: 458 ARLEGISGDPFTGICIANATI 478
A L G+ F GI + I
Sbjct: 398 AFLAGLPEQRFEGISFTDVDI 418
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 182/381 (47%), Gaps = 37/381 (9%)
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
G+ D + +T A + A++ + G ++Y+P G + + + T L A L
Sbjct: 49 GIEDDDSLDTAAIQAALDDCAGE----GGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 104
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
QD E+P ++ S G D + + + ++V +TG+ G IDG G+ WW+
Sbjct: 105 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GIIDGGGSYWWEFV 158
Query: 244 HKGKLKY------------------------TRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+Y RP L++ +N+ +S +TL NSP WN
Sbjct: 159 SLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 218
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
H VYS ++ + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 219 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 278
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G PT+ +V+ T + + +GSE +G ++ V + +T+ G+RIK+ GRG
Sbjct: 279 EVGRPTENVVVTNCTVEHGHGG-VVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 337
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMA 457
G V+D+ + M + F + G Y + D+ P +A P ++ +++ I A+ V A
Sbjct: 338 GTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITAEEVESA 397
Query: 458 ARLEGISGDPFTGICIANATI 478
A L G+ F GI + I
Sbjct: 398 AFLAGLPEQRFEGISFTDVDI 418
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 173/343 (50%), Gaps = 32/343 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG VGDGK +T + + AI DGG ++Y P G +LT L S+ T+ L
Sbjct: 85 NVKDFGAVGDGKRIDTFSIQSAI----MACPDGG-RVYFPEGVYLTYPIFLKSNITIELG 139
Query: 178 KDAFLLASQDLNEWPVIKPLP----------SY-GRGRDAAAGRYTSLIFGTNLTDVIVT 226
K A LL +++ +P+ LP SY G A + SLI G ++ +V +
Sbjct: 140 KGAVLLGAKEREMYPI---LPGEIDSQEFSNSYLGSWEGEANDMFASLITGISVENVNII 196
Query: 227 GDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
GD G IDG + WW ++ + RP + N+ I +T+ NSPSW +HP+ S
Sbjct: 197 GD-GVIDGNSSFDTWWYDAKVKRIAW-RPRTVYLNKCKNVLIEGITIRNSPSWTIHPLMS 254
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
N+ + I P +PNTDG++P+SC + I GDDC+A+KSG MP
Sbjct: 255 QNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKSGKLSVSQKLPMP 314
Query: 345 TKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GY 401
++ L IR C+ Y + +GSEMSGG+++V E+ T+ G+RIKT GRG G
Sbjct: 315 SENLYIR--NCLMEYGHGAVVIGSEMSGGVKNVHVENCVFKKTDRGIRIKTRRGRGKTGI 372
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV 440
+ +I+ + M + F + Y AD + + LPV
Sbjct: 373 IDEIHAANIKMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPV 415
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 62/349 (17%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+TDFGG GDG T N++AF+ AI L+ S GG +L VP G WLTG L ++ L+L
Sbjct: 51 LTDFGGSGDGVTLNSEAFEKAIQYLA---SKGGGRLIVPQGVWLTGPIELENNVELHLSD 107
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
++ ++ SQD + +P+++ + R + ++V VTG G IDG G +
Sbjct: 108 NSIVVFSQDKSLYPIVETV-----FEGCKTFRCKPQLSAVRKSNVAVTG-KGIIDGAGDI 161
Query: 239 W------------WQQ--------------------FHKGK------------------- 247
W W + +++G
Sbjct: 162 WRLGKKNEMPPMVWNECIQSGGILSEDGELWYPTESYYRGAKDAIQNIVPWAKTMEDFES 221
Query: 248 -LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGI 306
+ RP ++ F D + + + NSP WNVH S +I+V I + P + N DGI
Sbjct: 222 VRDFLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGI 281
Query: 307 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALG 366
+ +SCTN + D + GDD + +KSG DE G G+P +++ C + + +G
Sbjct: 282 DIESCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHGGFV-VG 340
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
SEMSGG++++ + + T+ G+R K+ GRGG V++IY++ + M+ +
Sbjct: 341 SEMSGGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMNDI 389
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 43/386 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
I DFG K +N DAI++ + ++ GG ++ +P G WLTG +L S+ L+L
Sbjct: 68 IRDFGA--RQKNNNNHKSTDAIHRAIDAATTAGGGKVLIPRGNWLTGPIHLKSNINLHLE 125
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S+D ++ PV+K R Y+SLI+ N+ +V +TG G ++GQG
Sbjct: 126 EGASLYFSEDKEDYLPVVKH-----RYEGVETYNYSSLIYAKNIENVAITG-KGILEGQG 179
Query: 237 ALW--W-----------------QQFHKGKLKY-TRPYLMEFMYTDNIQISSLTLLNSPS 276
W W + F KG K RP + F + NI I +TL SP
Sbjct: 180 EHWLKWGTVQPRATATKVPLSRRKNFGKGAGKEGMRPSFVVFWKSKNIFIEGITLRESPM 239
Query: 277 WNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
WN+H +YSS+I+V+ ITI + V S N DGI DS ++ +E ++ +GDD + +KSG++E
Sbjct: 240 WNIHLIYSSHIVVRDITINS-VESHNGDGIVLDSSSDALLEYNHLSTGDDAIVLKSGFNE 298
Query: 337 YGIAYGMPTKQLVIRRLTC--ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKT 394
G+ +PT+ +VIR + S + GSE SGGI+++ D + G+R KT
Sbjct: 299 EGLEINIPTENVVIRNYYAYDVRTGSGGVVFGSETSGGIRNIYVHDALFEKCDRGIRFKT 358
Query: 395 AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL---PVIQGINYRDIVA 451
A GRG ++I + + M +++ + + Y + P+++ I R++
Sbjct: 359 ARGRGNITENIIISDVQMKNIRYE-------AINFNTAYTGAGVGPSPLVRNIEIRNVKI 411
Query: 452 DNVSMAARLEGISGDPFTGICIANAT 477
D V A L G+ I + N +
Sbjct: 412 DGVPNAIVLNGLPEKWIENIYMENIS 437
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 192/426 (45%), Gaps = 70/426 (16%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +I FG DG + NT+A AI+ SQ GG + VPAG WLTG L S+
Sbjct: 42 RRDTTNIIAFGAKPDGVSLNTQAINKAISTCSQ---KGGGVVLVPAGIWLTGPIVLKSNV 98
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L K A LL + D N++ +++ + R A R S + GTNL +V +TG G +
Sbjct: 99 NLHLKKAATLLFTTDKNQYALVEGVYEGKR-----AARNQSPVSGTNLANVAITGQ-GIL 152
Query: 233 DGQGALW-----------------------------W---QQFHKGKLK----------- 249
DG G +W W +QF K +
Sbjct: 153 DGNGDVWRAVHKSQLTESQWKEKVESGGVLKDDGKTWYPSEQFKKASTENRSMLLAPGKT 212
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + +T NSP+W +HP+ ++ ++ +T P +
Sbjct: 213 PQDFADMKDFLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYA 272
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N DG++ +SC N IE C + GDD + +KSG DE G GMPT+ +IR T + +
Sbjct: 273 HNGDGMDIESCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRNNTVYNGHG 332
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG-----YVKDIYVRGMTMHTM 415
+ +GSEMSGG + + + + T+ G+R K+ GRGG Y KDI+++ + +
Sbjct: 333 GFV-VGSEMSGGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAI 391
Query: 416 KWAFWMTGNYGSHADNHYDP---KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+ + + + + P + PV + + + +IV + G+ I
Sbjct: 392 FFDMYYFVKFATDGERDERPVVNEGTPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIA 451
Query: 473 IANATI 478
+AN +
Sbjct: 452 MANMVL 457
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 184/368 (50%), Gaps = 33/368 (8%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ ++ DFG GDG +T + AI + ++ VP G + S L L
Sbjct: 101 TLNVRDFGAKGDGVQDDTGFIQAAIMCCPK-----NGRVLVPEGIYRVSSLFLKDDLRLE 155
Query: 176 LHKDAFLLASQDLNEWPVIKPL-PSYGRGRDAAAGR--------YTSLIFGTNLTDVIVT 226
+ K A L A D ++PV+K L SY + G ++++I G N+ +V++
Sbjct: 156 IGKGAVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLDMFSAIITGINVKNVVLY 215
Query: 227 GDNGTIDGQGAL----WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
G G I+G WW ++ + RP ++ + +++ + + + NSPSWN+HP
Sbjct: 216 G-QGLIEGNAGYEEDNWWYNAKVRRIAF-RPRMIFLNHCEHVVVQGIRVQNSPSWNIHPY 273
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
+S+++ +T++ P SPNTDG++P+SC + I Y GDDC+A+KSG G Y
Sbjct: 274 FSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYR 333
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--G 400
+P++ +VIR+ C+ +I +GSEM+GG++ + +D ++T+ G+RIKT GRG
Sbjct: 334 VPSEDIVIRQ-CCMRDGHGSITIGSEMAGGVKHLTVKDCLFLHTDRGLRIKTRRGRGEAA 392
Query: 401 YVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA----------LPVIQGINYRDIV 450
+ I + M + F + Y D H + A P ++ + +R+I
Sbjct: 393 VIDGILFEHIRMDHVMTPFVINCFYYCDPDGHSEYVATKEMLPIDERTPYVKELVFRNIE 452
Query: 451 ADNVSMAA 458
A N +AA
Sbjct: 453 ASNCHVAA 460
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 187/427 (43%), Gaps = 45/427 (10%)
Query: 85 VVALLSQRGAESR---KARRLDSFEYNAISCRA--HSASITDFGGVG----DGKTSNTKA 135
VV LL ++R +A E+ +SC +A+ V +G +N +A
Sbjct: 50 VVTLLHDLSPDTRYIFEAEGFGRLEFRTVSCAGLVDAAAFQLLPDVALDDEEGARANAQA 109
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
+ A+ + Q G L + AG W L S+ +L + A L A WP++
Sbjct: 110 LERAVAAVPQ-----GGTLRLAAGVWTASPVRLKSNMAFHLAQGAVLRAPSTRRGWPILP 164
Query: 196 PLPSYGRGRDAAAGR----YTSLIFGTNLTDVIVTGDNGTIDGQG--ALWWQQFHKGKLK 249
GR + G +T+ + + ++++ G G +DG G WW+ + +
Sbjct: 165 ARDEAGRMLGSWEGLPDACFTAPVHAIGVDNLVIEG-RGILDGSGDKGDWWRWPKETRDG 223
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
RP + + + T+ N+ SW +HP +++ G++I AP SPNTDG NP+
Sbjct: 224 ARRPRGLHLVSCRKTNLLGFTIRNAASWTIHPQGCEDLIAAGLSIAAPHDSPNTDGFNPE 283
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGW-------DEYGIAYGMPTKQLVIRRLTCISPYSAT 362
SC N I GDDC+AVK+G D G+ ++ R
Sbjct: 284 SCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGVRVGHCLMER------GHGG 337
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
+ +GSEMSGG+ DV ED I T+ G+R+KT GRGG V +I +R + + +K A
Sbjct: 338 LVIGSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTALSAN 397
Query: 423 GNYGSHADNHYD----------PKALPVIQGINYRDIVADNVSMAA-RLEGISGDPFTGI 471
+Y AD H D P I GI D+ N+S AA G++ P +
Sbjct: 398 AHYHCDADGHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLSHAAGAFLGLAEAPIRNV 457
Query: 472 CIANATI 478
I N TI
Sbjct: 458 TIRNVTI 464
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 202/472 (42%), Gaps = 52/472 (11%)
Query: 85 VVALLSQRGAESRKARRLDSF---EYNAISC----RAHSASITDFGGVGD--GKTSNTKA 135
VV LL ++R D F E+ C A + S+T + D G +N +A
Sbjct: 57 VVTLLHDLRPDTRYVFEADGFASLEFRTAPCAGLVEATAFSLTPDIALDDEAGARANARA 116
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
++A+ + G L AG W L S T +L + A L A N WP++
Sbjct: 117 LEEAVAAVP-----AGGTLQFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPSTRNGWPILP 171
Query: 196 PLPSYGRGRDAAAGR----YTSLIFGTNLTDVIVTGDNGTIDGQG--ALWWQQFHKGKLK 249
GR + G + + + ++++ G G +DG G WW + +
Sbjct: 172 ARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWSWPKETRDG 230
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
RP + + N+ + T+ N+PSW VHP + G+TI AP SPNTDG NP+
Sbjct: 231 ARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPE 290
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGW-------DEYGIAYGMPTKQLVIRRLTCISPYSAT 362
SC N I GDDC+AVK+G D G+ + ++ R
Sbjct: 291 SCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMER------GHGG 344
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
+ +GSEMSGG+ DV ED + T+ G+R+KT GRGG V +I +R + + + A
Sbjct: 345 LVIGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDGVHTALSAN 404
Query: 423 GNYGSHADNH------YDPKAL----PVIQGINYRDIVADNVSMAARL-EGISGDPFTGI 471
+Y AD H DP + P I GI D+ +++ AA + G+ P I
Sbjct: 405 AHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNI 464
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFP 523
I N TI H V I M GV P E + + E I CD P
Sbjct: 465 AIRNLTI---VSHDPVAVATPPI--MADGVRPMLHEGIVFEQAEII--CDDP 509
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 164/343 (47%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I+ FG GDG T NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 46 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVN 102
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I P+ G D R S I + ++ +TG G D
Sbjct: 103 LYTERNALVLFTGDFEAYPII---PTSFEGLDTR--RCQSPISARDAENIAITG-YGIFD 156
Query: 234 GQGALW------------WQQFHK----------------GKLK---------------- 249
G G W W + K G LK
Sbjct: 157 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACKDFNVPEGINT 216
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + + + +T NSPSW +HP+ +I V I +I P S
Sbjct: 217 DEEWNEIRAWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWYS 276
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 277 QNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 336
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 337 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 180/381 (47%), Gaps = 37/381 (9%)
Query: 124 GVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLL 183
G+ D + +T A + A++ + G ++Y+P G + + + T L A L
Sbjct: 12 GIDDDGSLDTAAIQAALDDCAGT----GGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF 243
QD E+P ++ R + + + +V +TG+ G IDG G+ WW+
Sbjct: 68 FVQDFTEFPTVE-----SRWEGWNQDGFHPCLHVADAANVTITGE-GVIDGGGSYWWEFV 121
Query: 244 HKGKLKY------------------------TRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+Y RP L++ +N+ +S +TL NSP WN
Sbjct: 122 SVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
H VYS ++ + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 241
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G PT+ +V+ T + + +GSE +G ++ V + +T+ G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGG-VVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMA 457
G V+D+ + M + F + G Y + D+ +P +A P ++ +++ I A+ V A
Sbjct: 301 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 458 ARLEGISGDPFTGICIANATI 478
A L G+ F GI + I
Sbjct: 361 AFLAGLPEQRFEGISFTDVDI 381
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 191/415 (46%), Gaps = 79/415 (19%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI + G V DG T NT+AF AI+ ++ S GG ++ VP G WLTG S+ L+L
Sbjct: 61 SILEHGAVSDGVTKNTEAFAKAIDAVA---SKGGGKVLVPRGIWLTGPIQFKSNINLHLE 117
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A +L S+D +++P+I+ + G + R S I+ + ++ +TG GT+DG G
Sbjct: 118 AGALILFSKDFDDYPLIE---TSFEGLNTV--RCISPIYADGVENIAITG-TGTLDGNGD 171
Query: 238 LW------------WQQF--------HKGKL----------------------------- 248
W W+ KG +
Sbjct: 172 AWRPVKKSKMTSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASSNFNVPDLIDPSELE 231
Query: 249 ---KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+ RP ++ + I + T NSP+WN+HP+ S +I+++ + + P S N DG
Sbjct: 232 TVKDFLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDG 291
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
++ +SC N I D GDD + KSG D+ G GMPT+ +V++ + + +
Sbjct: 292 LDLESCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVYHGHGGFV-I 350
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWAFW 420
GSEMSGG+++V D + T+ G+R K+ GRGG V++IY+ + M + + +
Sbjct: 351 GSEMSGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMINIPTDVINFNLF 410
Query: 421 MTGNY------GSHADNHYDPKALPV------IQGINYRDIVADNVSMAARLEGI 463
GN S D D A+PV + I ++I A +AA +G+
Sbjct: 411 YGGNSPVLEADQSAEDEARDEVAVPVSETTPSFKNIFMKNIKATGSGVAANFQGL 465
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 194/431 (45%), Gaps = 77/431 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ ++ DFG VG+GK T+AF AIN LS GG L VPAG W TG L S+ L
Sbjct: 48 RTVNLKDFGAVGNGKDLCTEAFASAINTLS---GQGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K A +L S D++ +P+++ + G D R S I G NL +V +TG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGE-GAIDG 158
Query: 235 QGALW------------WQQ-FHKGKL--------------------------------- 248
G W W+Q +G +
Sbjct: 159 NGHFWRPLKREKVTESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVPRHLITEEE 218
Query: 249 -----KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ + N+ + + NSP+WN+HP+ N+LV+ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNG 278
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + +KSG DE G + +V+ T + +
Sbjct: 279 DGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTVFKGHGGFV 338
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWA 418
+GSEMSGG+++V + + + T+ G+R K+ GRGG V++I+V ++M + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPITFN 397
Query: 419 FWMTG-------NYGSHADNHYDP----KALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+ G G +P + P + I+ R++V A GI P
Sbjct: 398 LYYGGKSAVEVLESGETVPAKVEPLPVDETTPCFRNIHVRNLVCAGARRALFFNGIPEMP 457
Query: 468 FTGICIANATI 478
GI + + I
Sbjct: 458 IDGIVLEDIDI 468
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I+ FG GDG T NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 53 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVN 109
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I P+ G + R S I N ++ +TG G D
Sbjct: 110 LYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFD 163
Query: 234 GQGALW------------WQQFHK----------------GKLK---------------- 249
G G W W + K G LK
Sbjct: 164 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINT 223
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + I + +T NSPSW +HP+ + V I +I P S
Sbjct: 224 DEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 283
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 284 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 343
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 344 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 100/139 (71%)
Query: 95 ESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQL 154
E + A LD FEY AI+CR HSA +TDFGGVGDGKTSNTK F+ AI+ LS Y+SDGGA L
Sbjct: 117 ECKVANGLDCFEYPAINCRKHSAVLTDFGGVGDGKTSNTKGFQYAISNLSHYASDGGALL 176
Query: 155 YVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSL 214
VP GKWLTGSFNL SHFTL+L K+A +L SQD ++WP + LPSYGRGRDA G+ +
Sbjct: 177 VVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESKWPTLPVLPSYGRGRDAPYGQGDII 236
Query: 215 IFGTNLTDVIVTGDNGTID 233
I G + I + + ID
Sbjct: 237 IQGLTILAPIDSPNTDGID 255
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 281 PVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
P +I++QG+TI+AP+ SPNTDGI+ + + I
Sbjct: 229 PYGQGDIIIQGLTILAPIDSPNTDGIDLEDSVSVLI 264
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I+ FG GDG T NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 56 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVN 112
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I P+ G + R S I N ++ +TG G D
Sbjct: 113 LYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFD 166
Query: 234 GQGALW------------WQQFHK----------------GKLK---------------- 249
G G W W + K G LK
Sbjct: 167 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINT 226
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + I + +T NSPSW +HP+ + V I +I P S
Sbjct: 227 DEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 286
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 287 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 121/194 (62%), Gaps = 2/194 (1%)
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGI+PDS ++ IED YI +GDD VAVKSGWD+YGI Y P+ + IRRLT SP+ A I
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSPF-AGI 59
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
A+GSE SGG+ +V AE I N G+ +KT +GRGG +++I V + M ++ ++
Sbjct: 60 AIGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISA 119
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI-GMAA 482
+ G H D +Y+P ALPV++ + +++ V A + G+ PFT IC++N + G
Sbjct: 120 DVGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPII 179
Query: 483 KHKKVPWTCADIGG 496
+ VPW C+ + G
Sbjct: 180 STRNVPWKCSYVSG 193
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 196/431 (45%), Gaps = 77/431 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG VG+G+ T+AF AI+ L++ GG L VPAG W TG L S+ L
Sbjct: 48 RKVNLADFGAVGNGEELCTEAFAKAIDALAE---KGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K A +L S +++ +P+++ + G D R S + G NL +V +TG+ G IDG
Sbjct: 105 HLEKGAIILFSPNVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGE-GAIDG 158
Query: 235 QGALW------------WQQ-FHKGKL--------------------------------- 248
G W W+Q +G +
Sbjct: 159 NGHYWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKSEEE 218
Query: 249 -----KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ + N+ + + NSP+WN+HP+ N+L++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC NT I + GDD + +KSG DE G G + +V+ T + +
Sbjct: 279 DGLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCTVFKGHGGFV 338
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWA 418
+GSEMSGG+++V + + + T+ G+R K+ GRGG V++I++R ++M + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITFN 397
Query: 419 FWMTG-------NYGSHADNHYDP----KALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+ G G +P + P + I+ ++V A GI P
Sbjct: 398 LYYGGKSAVEVLESGEVVPAKVEPMPVDETTPCFRNIHVENLVCAGARRALFFNGIPEMP 457
Query: 468 FTGICIANATI 478
GI + N I
Sbjct: 458 IDGITLKNVDI 468
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I+ FG GDG T NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 56 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVN 112
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I P+ G + R S I N ++ +TG G D
Sbjct: 113 LYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFD 166
Query: 234 GQGALW------------WQQFHK----------------GKLK---------------- 249
G G W W + K G LK
Sbjct: 167 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINT 226
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + I + +T NSPSW +HP+ + V I +I P S
Sbjct: 227 DEEWNEIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 286
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 287 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 191/436 (43%), Gaps = 77/436 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG V DGKT NT+A AI ++S + GG ++ +P G WLTG L S+ L
Sbjct: 12 YEVNIKDFGAVADGKTLNTEAINKAIQKVS---ARGGGKVIIPQGLWLTGPIELQSNVNL 68
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y +++ +L S + N++P+I+ R R S I N ++ +TG +G DG
Sbjct: 69 YTEENSLILFSDNFNDYPIIETSFEGLETR-----RCQSPISAVNAENIAITG-HGVFDG 122
Query: 235 QGALW------------WQQF--------------HKGKLK------------------- 249
G W W+ +G LK
Sbjct: 123 AGDSWRPVKKGKMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEFNNPEGIETEEQ 182
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP L+ N+ + +T NSPSW +HP+ +I + G+ + P S N
Sbjct: 183 WNEIRPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNG 242
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
D ++ +SCTN + + +GDD + +KSG DE G G P + ++++ + + +
Sbjct: 243 DALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGHGGFV 302
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMT 422
+GSEMSGG++++ D + T+ G+R K+ GRGG V++I++ + M + A
Sbjct: 303 -VGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINMIDIPHEALLFD 361
Query: 423 GNYGSHADNHYDPKAL---------------PVIQGINYRDIVADNVSMAARLEGISGDP 467
YG A + L P + I ++ A V A G+ P
Sbjct: 362 LFYGGKAAGEETAEELAGRMKAEVPPVTEETPAFRDIYISNVTARGVGRAMFFNGLPEMP 421
Query: 468 FTGICIANATIGMAAK 483
+ I + T+ A K
Sbjct: 422 IRNVHIKDVTVSRAEK 437
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 191/400 (47%), Gaps = 61/400 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T FG GKT +T AF+ AI++ Q GG ++ VP G +LTG+ L S+ L++ K
Sbjct: 26 VTRFGADSGGKTDSTAAFQQAIDEAHQ---KGGGRVTVPKGVFLTGALRLKSNVELHVTK 82
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
DA + SQ+ ++ LP+ R Y+ LI+ ++ +TG G +DGQ
Sbjct: 83 DAVIRFSQNPADY-----LPAVLTRFEGVELYNYSPLIYAYEAENIAITG-GGMLDGQAD 136
Query: 237 -ALWW-----------------------------QQFHKGKLKYTRPYLMEFMYTDNIQI 266
WW ++ G Y RP ++ N+ I
Sbjct: 137 DRHWWPWKRGTNGQPSQEKDRDALFEMAERNVPVEERRFGTGHYLRPNFIQPYRCKNVFI 196
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+T++NSP W +HPV N+ V G+ +I PNTDG++P+SC + I++C +GDD
Sbjct: 197 QGVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPESCKSMIIKNCLFDNGDD 254
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAI 384
C+A+KSG + G +P++ +VI + + +GSE+SGG+++V AE + +
Sbjct: 255 CIAIKSGRNADGRRINVPSENIVIENNEMKDGHGG-VTIGSEISGGVKNVFAEGNLMDSP 313
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF------WMTGNYGSHADNHYDPKAL 438
N + +RIKT RGG +K+IY + ++K + G+ G
Sbjct: 314 NLDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEYEEGDAGEFK--------- 364
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
PV++GI ++ + R+ P TG+ + N+ I
Sbjct: 365 PVVRGIEVDELKSAGGRYGIRVLAYDHSPVTGLKVTNSEI 404
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 217/484 (44%), Gaps = 98/484 (20%)
Query: 78 KLVPLLIVVALLSQRGAESRKARRLDSFE---YNAISCRA----------HSASITDFGG 124
K + L+ V+ ++S R K R++D E Y + H +IT +G
Sbjct: 7 KYLFLIAVLVVMSSR----VKGRQIDPVEATIYEGVEIEMPQVQLPSFPDHEVNITAYGA 62
Query: 125 VGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLA 184
VG+G NT AF AI++++Q GG ++ VP G WLTG L S+ L+L + A +L
Sbjct: 63 VGNGIEKNTAAFAKAIDEVAQA---GGGRVIVPRGIWLTGPVTLQSNINLHLEEGALVLF 119
Query: 185 SQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH 244
S+D +++P++K + G + R TS I ++ +TG G IDG G W +
Sbjct: 120 SRDFDDYPLVK---TSFEGLNTV--RCTSPINAFEAENIAITG-KGVIDGNGDAW-RPVK 172
Query: 245 KGKL-----------------------------------------------------KYT 251
KGK+ +
Sbjct: 173 KGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSSSNFNVPDLISDDELASVKDFL 232
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
RP ++ + + + + T NSP+WN+HP+ S N++++ + + P S N DG++ +SC
Sbjct: 233 RPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQNGDGLDLESC 292
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
N + + GDD + KSG ++ G GMPT+ ++++ T + + +GSEMSG
Sbjct: 293 KNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTVYHAHGGFV-VGSEMSG 351
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWAFWMTGNY- 425
G+++V + I T+ G+R K+ GRGG V++I++ + M +++ + GN
Sbjct: 352 GVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDMINIPTDAIRFNMFYGGNSP 411
Query: 426 -----GSHADNHYDPKALPVIQGI-NYRDIVADNVS-----MAARLEGISGDPFTGICIA 474
D D +PV + ++DI N++ AA G+ + +
Sbjct: 412 VLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAFFMGLPEKSLENVRLE 471
Query: 475 NATI 478
NA +
Sbjct: 472 NALL 475
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 193/425 (45%), Gaps = 75/425 (17%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
SF+ R I D+G V G+ SNT+A AI S+ +GG + VP+G WLT
Sbjct: 10 SFKVERPVFREAQYDIRDYGAVAGGRVSNTEAINAAIRTCSE---EGGGHVIVPSGLWLT 66
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY-GRGRDAAAGRYTSLIFGTNLTD 222
G +++ L++ A L+ ++ E+P+I + Y G+ R R S I + +
Sbjct: 67 GPVRILTGVDLHVENGAVLMFDKNREEYPLI--ISDYEGQPRI----RTVSPIMAADAQN 120
Query: 223 VIVTGDNGTIDGQGALW------------WQQF-----------HKGKL----------- 248
V +TG+ GTIDG G LW W +F ++G +
Sbjct: 121 VAITGE-GTIDGNGELWRPLKKFKVTQRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGC 179
Query: 249 --------------------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
+ RP ++ F+ D + I +TL NSP+WNVHP+ +N+
Sbjct: 180 MEGEPSLDDPDALKKAERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLT 239
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
V I P + N DGI+ +SC I + GDD + +KSG +E G PTK +
Sbjct: 240 VSNAFIKNPYYAQNGDGIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYV 299
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
I T + + + +GSEMS G+ +V ++ + T+ G+R K+ +GRGG V++I +
Sbjct: 300 YIHDCTVMHAHGGFV-VGSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLE 358
Query: 409 GMTM---------HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAAR 459
+ M TM ++ + + D + +PV + +N ++I A +
Sbjct: 359 NINMTGIVGEAIIFTMGYSLYKLEHEKKDEDVFVSTEDIPVFRNVNMKNITCVGAKTAFK 418
Query: 460 LEGIS 464
EGI+
Sbjct: 419 AEGIA 423
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 191/427 (44%), Gaps = 68/427 (15%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG + DG T NT+A +AI +S S GG ++ +P G WLTG L+S+ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAIKTVS---SKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ S D + +P+I+ + G D R S I N ++ +TG +G DG
Sbjct: 114 YTEKNALIVFSSDTSLYPIIE---ASFEGLDTK--RCQSPISAMNAENIAITG-SGVFDG 167
Query: 235 QGALW------------WQQF--------HKGKLKY------------------------ 250
G W W+ GK+ Y
Sbjct: 168 AGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNSGQKEITD 227
Query: 251 ---------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
RP ++ + + I + +T NSP W +HP+ ++ + + + P S
Sbjct: 228 EEWIYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQ 287
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N + +C+ +GDD + +KSG DE G G P + ++I+ T + +
Sbjct: 288 NGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGG 347
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + T+ G+R K+ GRGG V++I++ + M +
Sbjct: 348 FV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALT 406
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + D+ P + PV + I +++ A G+ P I I N
Sbjct: 407 MDLYYAVNDSPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNILIKNM 466
Query: 477 TIGMAAK 483
T+ A K
Sbjct: 467 TVTNAKK 473
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 180/364 (49%), Gaps = 32/364 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG VGDG T +T A + AI + G+++ +PAG + L SH TL L
Sbjct: 81 NVKDFGAVGDGVTMDTAAIQAAIMAAPK-----GSRVVIPAGTYKILPLFLKSHMTLELL 135
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDA--------AAGRYTSLIFGTNLTDVIVTGDN 229
+ A LLA D ++P++ G A A Y S+I G + DV + G
Sbjct: 136 EGATLLAHTDRKDYPILPGKMILEDGSIAYLASWEGDMADCYASIITGIGVRDVRIIG-Q 194
Query: 230 GTIDGQG--ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
GTIDG G A WW K K RP + + +++ + +T+ NSPSW VHPV S+ +
Sbjct: 195 GTIDGNGQNADWWVDC-KVKRGAWRPRSLYLVDCEDVVVEGITIKNSPSWTVHPVRSTKL 253
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
+T+ P SPNTDGI+P+SC I GDDC+A+KSG + P++
Sbjct: 254 RFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVDMRRPSEN 313
Query: 348 LVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
++IR C+ Y + LGSEMSGGI+ V E NT+ G+RIKT GRG + +
Sbjct: 314 IIIR--NCLMEYGHGGVVLGSEMSGGIKHVYVERCFFRNTDRGLRIKTRRGRGNTAVIDE 371
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDIVADNV 454
IY++ + M + F + Y D + LPV I +N+ +I +N
Sbjct: 372 IYIKNIKMDGVLTPFTLNCFYFCDPDGKTEYVWSKDKLPVDERTPYIGTLNFENIYCENS 431
Query: 455 SMAA 458
+ A
Sbjct: 432 EVCA 435
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 189/427 (44%), Gaps = 68/427 (15%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG + DG T NT+A +AI +S S GG ++ +P G WLTG L+S+ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAIKAVS---SKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ S D + +P+I + G D R S I N ++ +TG NG DG
Sbjct: 114 YAEKNALIVFSSDTSLYPIID---TSFEGLDTK--RCQSPISAMNAENIAITG-NGVFDG 167
Query: 235 QGALW------------WQQF--------HKGKLKY------------------------ 250
G W W+ GK+ Y
Sbjct: 168 AGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITD 227
Query: 251 ---------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
RP ++ + + I + +T NSP W +HP+ ++ + + + P S
Sbjct: 228 EEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQ 287
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N + +C+ +GDD + +KSG DE G G P + ++I+ T + +
Sbjct: 288 NGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGG 347
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + T+ G+R K+ GRGG V++I++ + M +
Sbjct: 348 FV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDISNDALT 406
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + D P + PV + I +++ A G+ P I I N
Sbjct: 407 MDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRGAERAVYFNGLPEMPLKNIFIKNM 466
Query: 477 TIGMAAK 483
T+ A K
Sbjct: 467 TVTNAKK 473
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 201/436 (46%), Gaps = 75/436 (17%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG GDG+ NT+AF A ++ S GG + VP G W TG L S+ L+L +
Sbjct: 50 ITDFGAKGDGQFKNTEAFHKA---FAKAFSQGGGTVVVPEGIWYTGPITLKSNINLHLKQ 106
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A +L S +++P+++ SY + A R TS I ++ +TG G IDG G
Sbjct: 107 GALILFSDQFDDYPLVET--SYEGLKSA---RSTSPINALGAKNIAITG-KGIIDGNGGA 160
Query: 239 W------------WQQF----------------HKGKLK-------------------YT 251
W W + LK +
Sbjct: 161 WRPVKKSKMTQHQWNALVASGGVLSDNKSVWYPDEAALKGSKSDLSDWTIEQLQTVRSFL 220
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
RP ++ + +NI + T NSP+WN+HP+ S NI+V+ +T+ P + N DG++ +SC
Sbjct: 221 RPVMVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLESC 280
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
N + + GDD + +KSG +E G MPT+ ++I+ T + + +GSEMSG
Sbjct: 281 ENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKNNTVYHGHGGFV-VGSEMSG 339
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW-AFWMTGNYGSH-- 428
G+ + I T++G+R K+ GRGG V+ IY+ + M+ +K A YG
Sbjct: 340 GVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTDAIRFNLYYGGQAP 399
Query: 429 ------ADNHYDPKALPV-IQGINYRDI-VADNVSMAARLEGISGDPFTGI---CIANAT 477
A+N D V I+ +++DI ++D S+ A G F G+ I N +
Sbjct: 400 DLSNDLAENTEDRDVPEVTIETPSFKDIYISDITSVKAHKSGF----FMGLPEMNIQNVS 455
Query: 478 IGMAAKHKKVPWTCAD 493
I + H + +T D
Sbjct: 456 IKNSLFHGEEGFTLID 471
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 203/467 (43%), Gaps = 81/467 (17%)
Query: 80 VPLLIVVALLSQRGAESRKARRLDSFEYNAISC-RAHSASITDFGGVGDGKTSNTKAFKD 138
+PLLI Q GA+++KA D+ A + + + +I +G DG T NTK+
Sbjct: 11 IPLLISTF---QAGAQNKKAYSFDNLPVIAKTFFKKDTINILKYGAKNDGITLNTKSINQ 67
Query: 139 AINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
AI ++ GG + +P G WLTG L S+ L+L K+A L ++D++++P+++
Sbjct: 68 AITDCNKR---GGGVVVIPEGLWLTGPIELKSNVNLHLKKNALLQFTKDMDQYPLVE--- 121
Query: 199 SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------------WQQ---- 242
G R S I+ +N ++ +TG G +DG G W W+
Sbjct: 122 --GNWEGLPQMRNQSPIWASNQQNIAITG-YGIVDGGGEAWRMVKKDKLTESQWKSLLAS 178
Query: 243 ------------------------------------FHKGKLKYTRPYLMEFMYTDNIQI 266
F+ + RP L+ + +
Sbjct: 179 GGVVGEDNKSWYPSAKSLKGAKMKNAGVITKDKDAAFYAEIKDFLRPNLLVLNRCKRVLL 238
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+T NSP+WN+HP+ S +I ++ + P + N DG++ +SC N +E GDD
Sbjct: 239 EGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIESCKNVLVEGSTFDVGDD 298
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
+ +KSG D G MPT+ +VIR T + + +GSEMSGG +++ D I T
Sbjct: 299 GICIKSGRDAEGRKRAMPTENVVIRHSTVYHAHGGFV-IGSEMSGGAKNIFISDCTFIGT 357
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD-------NHYDPKA-- 437
+ G+R KT GRGG V++IY R + M + + Y + D PK
Sbjct: 358 DIGLRFKTTRGRGGVVENIYARNINMKDIPGEAILFDMYYAAVDPVPLTGEKRETPKVEL 417
Query: 438 ------LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
PV + ++V D + A + G+ + I + N TI
Sbjct: 418 LPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPEMSISDIFLDNLTI 464
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 170/357 (47%), Gaps = 65/357 (18%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISH 171
+ + +IT++G DG + NT DAIN+ +S S GG + VP G WLTG L ++
Sbjct: 42 KKDTFNITNYGAKPDGISLNT----DAINKAISDCSKKGGGVVLVPNGYWLTGPIKLQNN 97
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
L+L K+A L S++ +++ +++ G + R S I G N+++V +TG G
Sbjct: 98 VNLHLKKNALLQFSKNFDDYKLVE-----GVYEGKPSARNESPIMGVNVSNVAITGQ-GI 151
Query: 232 IDGQGALW------------------------------WQQFHKGKL------------- 248
IDG G W W K K
Sbjct: 152 IDGNGDAWRMVRTSDLTEYEWKAKIAKGEGILSEDKKRWYPSEKNKRGHDQNISFWLGPG 211
Query: 249 ----------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
+ RP L+ N+ + +T NSP+WNVHP+ N+ ++G+ I P
Sbjct: 212 VKLSDFEPVKDFLRPNLIVLNNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPD 271
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
+ N DG + +SC N +E C GDD + +KSG DE G G+ T+ ++IR T
Sbjct: 272 YAHNGDGADIESCKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNNTVYKG 331
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + +GSEMSGG +++ D + T+ G+R KT+ GRGG V++I+++ + M +
Sbjct: 332 HGGFV-VGSEMSGGAKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINMFDI 387
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 167/318 (52%), Gaps = 22/318 (6%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ ++ +FG GDG +T + AIN S ++ +P G + + L S L
Sbjct: 81 TLNVKEFGAKGDGVHDDTTMIQCAIN-----SCPKNGRVLIPEGCYKISTLFLKSDLRLE 135
Query: 176 LHKDAFLLASQDLNEWPVIK-PLPSYGRGRDAAAGR--------YTSLIFGTNLTDVIVT 226
L + A L A D +++P++ + S+ + G + +I G N+++V +T
Sbjct: 136 LGRGAVLSAFTDRSKFPILPGRIESFDETEEYNLGSWEGNPLDSFAGIITGINVSNVEIT 195
Query: 227 GDNGTIDG--QGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
G+ GTIDG WW + + RP L+ + +NI + +T+ NSP WN+HP +S
Sbjct: 196 GE-GTIDGCADETNWWNNPKVRNIAW-RPRLIFLNHCNNITVQGITVKNSPCWNIHPYFS 253
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
++ +TI+ P SPNTDG++P+SC N I Y GDDC+A+KSG G + P
Sbjct: 254 DDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRP 313
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
++ L IR+ C+ +I +GSEM+GG++++ + I+T+ G+RIKT GRG KD
Sbjct: 314 SENLEIRQ-CCMRDGHGSITIGSEMAGGVKNLTVRECLFIHTDRGLRIKTRRGRG---KD 369
Query: 405 IYVRGMTMHTMKWAFWMT 422
+ G+ ++ MT
Sbjct: 370 AIIDGVLFENIRMDHVMT 387
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 195/443 (44%), Gaps = 91/443 (20%)
Query: 110 ISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI 169
++ +A + SI FG GDG + NT+A AI + SQ GG + +PAG W+TG L
Sbjct: 53 VNIKADTISIVRFGAQGDGISLNTQAINRAIAETSQ---KGGGVVLIPAGVWVTGPIELK 109
Query: 170 SHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
S+ L++ +DA LL + D +++ +++ A R S I G+NL ++ +TG
Sbjct: 110 SNINLHIQRDAILLFTDDFDQYKLVE-----ANWEGQPAWRNQSPISGSNLENIAITG-T 163
Query: 230 GTIDGQGALW------------WQQF---------------------HKGKLK------- 249
G IDG G W W++ + K K
Sbjct: 164 GIIDGNGGAWRMVKKSKMTASQWKKLVESGGVLNEEKNIWYPSASSLNGSKTKNPSAVVP 223
Query: 250 ------------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+ RP L+ I + +T NSP+WN+HP+ ++ V+ + + P
Sbjct: 224 GKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNP 283
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+ N DGI+ +SC N +E+ GDD + +KSG DE G +PT+ ++IR
Sbjct: 284 WYAQNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYH 343
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + +GSEMSGG +++ D I T+ G+R KT GRGG V++I++ ++M +
Sbjct: 344 AHGGFV-IGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMFDIPG 402
Query: 418 AFWMTGNYGSHADNHYDPK----------------------ALPVIQGINYRDIVADNVS 455
+ AD +Y+ K A P + +D+V +
Sbjct: 403 EAIL-------ADMYYEAKDPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGAD 455
Query: 456 MAARLEGISGDPFTGICIANATI 478
A G+ G+ + N +I
Sbjct: 456 KAIFFRGLPEMNIKGMSLENISI 478
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 195/452 (43%), Gaps = 50/452 (11%)
Query: 85 VVALLSQRGAESRKARRLDSF---EYNAISC----RAHSASITDFGGVGD--GKTSNTKA 135
VV LL ++R D F E+ C A + S+T + D G +N +A
Sbjct: 49 VVTLLHDLRPDTRYVFEADGFASLEFRTAPCAGLVEAMAFSLTPDIALDDEAGARANARA 108
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
++A+ + G L AG W L S T +L + A L A N WP++
Sbjct: 109 LEEAVAAVP-----AGGTLRFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPSTRNGWPILP 163
Query: 196 PLPSYGRGRDAAAGR----YTSLIFGTNLTDVIVTGDNGTIDGQG--ALWWQQFHKGKLK 249
GR + G + + + ++++ G G +DG G WW + +
Sbjct: 164 ARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWSWPKETRDG 222
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
RP + + N+ + T+ N+PSW VHP + G+TI AP SPNTDG NP+
Sbjct: 223 ARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPE 282
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGW-------DEYGIAYGMPTKQLVIRRLTCISPYSAT 362
SC N I GDDC+AVK+G D G+ + ++ R
Sbjct: 283 SCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMER------GHGG 336
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
+ +GSEMSGG+ +V ED + T+ G+R+KT GRGG V ++ +R + + ++ A
Sbjct: 337 LVIGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQTALSAN 396
Query: 423 GNYGSHADNH------YDPKAL----PVIQGINYRDIVADNVSMAARL-EGISGDPFTGI 471
+Y AD H DP + P I GI D+ +++ AA + G+ P I
Sbjct: 397 AHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNI 456
Query: 472 CIANATIGMAAKHKKVPWTCADIGGMTSGVTP 503
I N TI H V I M GV P
Sbjct: 457 AIRNLTI---VSHDPVAVATPPI--MADGVRP 483
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 175/341 (51%), Gaps = 53/341 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG GDG T NT+AF+ AI + ++GG ++ VP G +LTG+ L S+ L+L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIEKCH---AEGGGRVVVPHGVFLTGAIYLKSNVNLHLT 113
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
+L S+D +++P++ + R Y+S I+ ++ +TG GT+DG
Sbjct: 114 DGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITG-KGTLDGNSD 167
Query: 237 --ALWW----------------------------------QQFHKGKLKYTRPYLMEFMY 260
WW +Q G +Y RP ++
Sbjct: 168 NDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYN 227
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
NI I + ++NSP WN++PV N+ ++ + +I+ PN DG +P++C N I+DCY
Sbjct: 228 CKNILIEDIKMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNVLIKDCY 285
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI-SPYSATIALGSEMSGGIQDVRAE 379
+GDDC+A+KSG DE G G P + +I CI + +GSE++GG +++ A
Sbjct: 286 FDTGDDCIAIKSGRDEDGRNIGRPAENHIIE--NCIMKDGHGGVVIGSEIAGGARNIYAL 343
Query: 380 DIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+ K + N + +R+KT+ RGG +++++++ + + T K A
Sbjct: 344 NNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEA 384
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 167/339 (49%), Gaps = 64/339 (18%)
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
T NT A AI + S +GG ++ VPAG WLTG + S+ L+L K A + +++ +
Sbjct: 2 TKNTDAINKAI---AACSENGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNFD 58
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW---------- 239
++P++ L +Y R S I G NL ++ +TG G IDG G W
Sbjct: 59 DYPLV--LTTY---EGTEQYRCQSPISGWNLENIAITG-YGVIDGGGDAWRYVKKSKLTE 112
Query: 240 --WQQF-------------------------------HKGKL---------KYTRPYLME 257
W++ G+L Y RP ++
Sbjct: 113 SQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVRDYLRPVMVN 172
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
+ NI + +T NSP+WN+HP+ S NI+++ +T+ P S N DGI+ +SC N I
Sbjct: 173 LVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVVIY 232
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDV 376
DC GDD + +KSG +E+G G+PT+ ++I CI + +GSEMSGG++++
Sbjct: 233 DCKFDVGDDAICMKSGKNEFGRKRGIPTENVII--ADCIVYHGHGGFTIGSEMSGGVRNI 290
Query: 377 RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ + I T+ G+R K+ GRGG V++IY+ + M +
Sbjct: 291 KVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDI 329
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 175/341 (51%), Gaps = 53/341 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG GDG T NT+AF+ AI + ++GG ++ VP G +LTG+ L S+ L+L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIEKCH---AEGGGRVVVPNGVFLTGAIYLKSNVNLHLT 113
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
+L S+D +++P++ + R Y+S I+ ++ +TG GT+DG
Sbjct: 114 DGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITG-KGTLDGNSD 167
Query: 237 --ALWW----------------------------------QQFHKGKLKYTRPYLMEFMY 260
WW +Q G +Y RP ++
Sbjct: 168 NDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYN 227
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
NI I + ++NSP WN++PV N+ ++ + +I+ PN DG +P++C N I+DCY
Sbjct: 228 CKNILIEDIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNVLIKDCY 285
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI-SPYSATIALGSEMSGGIQDVRAE 379
+GDDC+A+KSG DE G G P + +I CI + +GSE++GG +++ A
Sbjct: 286 FDTGDDCIAIKSGRDEDGRNIGRPAENHIIE--NCIMKDGHGGVVIGSEIAGGARNIYAL 343
Query: 380 DIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+ K + N + +R+KT+ RGG +++++++ + + T K A
Sbjct: 344 NNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEA 384
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 167/332 (50%), Gaps = 50/332 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+TDF GDG NT AFK AI+ + GG Q+ VP G +LTG+ L S+ L +
Sbjct: 57 LTDFDARGDGIFDNTAAFKAAIDACRKA---GGGQIRVPDGHYLTGAIQLHSNIELNVSA 113
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA- 237
A L+ S D ++PV+ R Y+ LI+ + +V +TG+ G +DGQ +
Sbjct: 114 GARLIFSTDPMDYPVV-----LTRYEGVEVMNYSPLIYARDAKNVAITGE-GVLDGQASN 167
Query: 238 -LWW----------------------------------QQFHKGKLKYTRPYLMEFMYTD 262
WW +Q G Y RP +EF +
Sbjct: 168 EHWWPWCGAERFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHYLRPSFVEFYNCE 227
Query: 263 NIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIV 322
N+ + + L +SP WN+HPV S N++V+G+ ++ PN DG NP+S + IE+CY
Sbjct: 228 NVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPESVDHMLIENCYFD 285
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED-- 380
+GDDC+A+KSG + G +P++ ++IR + + + +GSE+SG + +V AE
Sbjct: 286 TGDDCIAIKSGRNADGRRVAVPSENILIRNCQMKAGHGGVV-IGSEISGDVFNVYAEGCA 344
Query: 381 IKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + + +RIK RGG V++I++R + +
Sbjct: 345 MDSPDLWYMLRIKNNAMRGGVVENIHLRNIEV 376
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 171/376 (45%), Gaps = 36/376 (9%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
+G +N A ++A+ + G L + G W L S TL+L + A L A
Sbjct: 101 EGARANATALENAVAAVP-----AGGTLRLGPGVWTAFPVRLKSDMTLHLAEGAVLRAPS 155
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGR----YTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW 240
N WP++ GR + G + + + ++++ G G +DG G WW
Sbjct: 156 VRNRWPILPARDEAGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-RGILDGSGDKGDWW 214
Query: 241 QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ + RP + + Q+ T+ N+ SW +HP ++ G+TIIAP S
Sbjct: 215 SWPKETREGARRPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW-------DEYGIAYGMPTKQLVIRRL 353
PNTDG NP+SC N I GDDC+AVK+G D G+ + +++R
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQR- 333
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH 413
+ +GSEMSGG+ DV ED I T+ G+R+KT GRGG V +I +R + +
Sbjct: 334 -----GHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLD 388
Query: 414 TMKWAFWMTGNYGSHADNHYD------PKAL----PVIQGINYRDIVADNVSMAARL-EG 462
++ A +Y AD H D P + P + GI D+ N++ AA + G
Sbjct: 389 GVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLG 448
Query: 463 ISGDPFTGICIANATI 478
+ P I + N TI
Sbjct: 449 LPEAPIRNIVVRNLTI 464
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 194/431 (45%), Gaps = 77/431 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG VG+G+ T AF AI+ L++ GG L VPAG W TG L S+ L
Sbjct: 48 RKVNLADFGAVGNGEELCTAAFAKAIDALAE---KGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K A +L S D++ +P+++ + G D R S + G NL +V +TG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGE-GAIDG 158
Query: 235 QGALW------------WQQ-FHKGKL--------------------------------- 248
G W W+Q +G +
Sbjct: 159 NGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEE 218
Query: 249 -----KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ + N+ + + NSP+WN+HP+ N+L++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + +KSG DE G G + +V+ T + +
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFV 338
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWA 418
+GSEMSGG+++V + + + T+ G+R K+ GRGG V++I++R + M + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPITFN 397
Query: 419 FWMTG-------NYGSHADNHYDP----KALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+ G G +P + P + I+ +++V A GI P
Sbjct: 398 LYYGGKSAVEVLESGEKVLAKVEPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMP 457
Query: 468 FTGICIANATI 478
GI + + I
Sbjct: 458 IDGIVLEDIDI 468
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 196/438 (44%), Gaps = 79/438 (18%)
Query: 110 ISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI 169
+S + SI +G V G NT+A + AI S+ S GG + +P G WLTG L
Sbjct: 52 VSFPKLTVSIEKYGAVAGGLEKNTQAIEKAI---SEVSKKGGGTVKIPRGIWLTGPITLK 108
Query: 170 SHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
S+ L+L A LL S++ ++P+ + G + R S I N+ ++ +TG
Sbjct: 109 SNINLHLEDGALLLFSKNFEDYPLTD---TSFEGLNTM--RCISPINAMNVENIAITGK- 162
Query: 230 GTIDGQGALW------------WQQF--------HKGKL--------------------- 248
G IDG G W W GK+
Sbjct: 163 GVIDGNGDAWRPVKKGKMTSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSREYFNVPN 222
Query: 249 -----------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+ RP ++ + + + + T NSP+WN+HP+ S N++++ + + P
Sbjct: 223 LTKKEDLESVKDFLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNP 282
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
S N DG++ +SC N I + GDD + +KSG D+ G G+PT+ ++++ T
Sbjct: 283 WYSQNGDGLDLESCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNTVYH 342
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM----- 412
+ + +GSEMSGG++++ + I T+ G+R K+ GRGG V++IY+ + M
Sbjct: 343 AHGGFV-IGSEMSGGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPT 401
Query: 413 HTMKWAFWMTGNY------GSHADNHYDPKAL------PVIQGINYRDIVADNVSMAARL 460
+++ + +GN + D D + + PV + I ++I+A N AA
Sbjct: 402 EAIRFNMFYSGNAPILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFF 461
Query: 461 EGISGDPFTGICIANATI 478
G+ + + NA +
Sbjct: 462 MGLPEKSLENVTLENAML 479
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 179/377 (47%), Gaps = 64/377 (16%)
Query: 88 LLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYS 147
L S A+++ A L S + + +A + SI FG GDG + NT++ AI + SQ
Sbjct: 40 LSSYNPAQAQTAPSLPSIK--QVHVKADTISIVRFGAQGDGISLNTQSINRAIAETSQ-- 95
Query: 148 SDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAA 207
GG + +PAG W+TG L S+ L++ +DA LL + D +++ +++
Sbjct: 96 -KGGGVVLIPAGVWVTGPIELKSNINLHIQRDAILLFTDDFDQYKLVE-----ANWEGQP 149
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------------WQQF------------ 243
A R S I G+NL ++ +TG G IDG G W W++
Sbjct: 150 AWRNQSPISGSNLENIAITG-TGIIDGNGGAWRMVKKSKMTASQWKKLIESGGVLNDEKN 208
Query: 244 ---------HKGKLK-------------------YTRPYLMEFMYTDNIQISSLTLLNSP 275
+ K K + RP L+ I + +T NSP
Sbjct: 209 IWYPSASSLNGSKTKNPSAVVPGKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSP 268
Query: 276 SWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 335
+WN+HP+ ++ V+ + + P + N DGI+ +SC N +E+ GDD + +KSG D
Sbjct: 269 AWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRD 328
Query: 336 EYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTA 395
E G +PT+ ++IR + + +GSEMSGG +++ D I T+ G+R KT
Sbjct: 329 EAGRLRAVPTENVIIRNNVVYHAHGGFV-IGSEMSGGARNIWVYDCSFIGTDIGLRFKTT 387
Query: 396 VGRGGYVKDIYVRGMTM 412
GRGG V++I++ ++M
Sbjct: 388 RGRGGVVENIFIDRISM 404
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 184/373 (49%), Gaps = 26/373 (6%)
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYG 201
++ + ++ GG ++ V G TGS L SH L++ A L D +P P
Sbjct: 32 RIDEAAARGGGRVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPALYP-----PVEA 86
Query: 202 RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYT 261
R A A + ++ + V +TGD G G WW+ F G L + RP L+
Sbjct: 87 RWEGAPATIHQPCLYAHDAEHVAITGDGVIDGGGGP-WWEAFRAGTLAHPRPTLVGLHRC 145
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
++++ +TL +SP+W VHP+ ++ V+ +TI+ P SPNTDGI+P+SC N RI C+I
Sbjct: 146 THVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDPESCRNVRISGCHI 205
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDI 381
GDDC+A+K+G + + + +V+ T + + + LGSEMSGGI++V D
Sbjct: 206 DVGDDCIALKAGTEAS--PERVACENVVVTGCTLVHGHGGVV-LGSEMSGGIRNVVVADC 262
Query: 382 KAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--GSHADNHY--DPKA 437
T+ G+R+K GRGG V+D+ V + M + + +Y G D+ + D A
Sbjct: 263 VFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYDRGPGGDSPHVGDRGA 322
Query: 438 LPV------IQGINYRDIVADNVSMAARLE-GISGDPFTGICIANATIGMAAKHKKVPWT 490
LPV + I + A NV AA G++ P + + + + A + P+
Sbjct: 323 LPVDATTPLFRRITVAHVSARNVRAAAVFALGLAEQPVAELVLDDVAVSFAPDPE--PFE 380
Query: 491 CADIGGMTSGVTP 503
A M +GV P
Sbjct: 381 PA----MAAGVGP 389
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 169/379 (44%), Gaps = 42/379 (11%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
+G +N A ++A+ + G L + G W L S TL+L + A L A
Sbjct: 101 EGARANATALENAVAAVP-----AGGTLRLGPGVWTAFPVRLKSEMTLHLAEGAVLRAPS 155
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG-DNGTIDGQGAL------- 238
N WP++ GR G + L V G DN I+G+G L
Sbjct: 156 VRNSWPILPARDEAGR----MLGSWEGLPDACFAAPVDAIGADNLVIEGRGILDGSGDKG 211
Query: 239 -WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW + + RP + + Q+ T+ N+ SW +HP ++ G+TIIAP
Sbjct: 212 DWWSWPKETRDGARRPRGLHLVSCRKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAP 271
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW-------DEYGIAYGMPTKQLVI 350
SPNTDG NP+SC N I GDDC+AVK+G D G+ + ++
Sbjct: 272 HDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLM 331
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
+R + +GSEMSGG+ DV ED I T+ G+R+KT GRGG V +I +R +
Sbjct: 332 QR------GHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRV 385
Query: 411 TMHTMKWAFWMTGNYGSHADNHYD------PKAL----PVIQGINYRDIVADNVSMAARL 460
+ ++ A +Y AD H D P + P + GI D+ N++ AA +
Sbjct: 386 LLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGV 445
Query: 461 -EGISGDPFTGICIANATI 478
G+ P I + N TI
Sbjct: 446 FLGLPEAPIRNIVVRNLTI 464
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 190/396 (47%), Gaps = 32/396 (8%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+G V DG+T NT + A++ + G +YVPAG++ T S + S TLYL K A
Sbjct: 87 YGLVADGETDNTGRLQAALSTCPR-----GGTVYVPAGRYRTASLFMKSCTTLYLEKGAV 141
Query: 182 LLASQDLNEWPVIK-PLPS-------YGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTI 232
LL D +P++ +PS Y G + + L+ T + DV+VTG+ GT+
Sbjct: 142 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLNSFAGLLNITQVHDVVVTGE-GTL 200
Query: 233 D--GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
D Q WW ++ + RP + + ++NI + +T+ NS SW +HP++ ++ +
Sbjct: 201 DCDAQNGDWWIDPKVKRIAW-RPRAVAMVDSENICLHGITVQNSYSWTIHPIFVKHLDLL 259
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 350
I P +PNTDGI+P+SC TRI I GDDC+A+K+ G+ + VI
Sbjct: 260 SFNINNPYNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVI 319
Query: 351 RRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKDIYVR 408
R + I +GSEMSGG++D+ +T+ G+R+KT GRG + + R
Sbjct: 320 RNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFR 378
Query: 409 GMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIVADNVSMA- 457
+ M +K F + Y D H +ALPV + + DIVA + A
Sbjct: 379 NVEMRGVKAPFVINMFYFCDPDGHSPYVQCREALPVDEYTPKLGTLTMEDIVATDAQFAG 438
Query: 458 ARLEGISGDPFTGICIANATIGMAAKHKKVPWTCAD 493
+G+ P G+ + N TI K+ AD
Sbjct: 439 CYFDGLPEQPIEGVSMKNVTITFDPDAKEGQAAMAD 474
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 216/479 (45%), Gaps = 77/479 (16%)
Query: 67 SRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVG 126
+ ++ L ++ + V +L+Q+ +++ K + +S +I DFG V
Sbjct: 3 TNLTNLFCTALTILAVSFSVPVLAQKASDTYKDIEFKMAKIKEPVIPKNSVNIKDFGAVN 62
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
G NTKAF DAI+ +S+ GG ++ +P G WLTG L S+ L+ + A + S
Sbjct: 63 GGYVLNTKAFADAIDAVSK---KGGGKVIIPPGIWLTGPIILKSNIELHAERGALIKFST 119
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------- 239
D + +P+I R S I+G NL ++ TG NG DG G +W
Sbjct: 120 DKSLYPIIGT-----NFEGLNTWRCISPIYGKNLENIAFTG-NGVWDGSGEVWRQVKKSK 173
Query: 240 -----WQQF-------HKGK-----------------------LK----------YTRPY 254
W++F +K K LK + RP
Sbjct: 174 LTESQWKKFVSSGGVLNKDKTSWYPSETFMNASKGADQNVRPDLKTKEEFETIHDFLRPV 233
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
++ + + NSP+WN+HP +++V+ +T+ P S N DG++ + C N
Sbjct: 234 MVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVECCKNV 293
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
+E+ GDD + +KSG D+ G+ G+P + +++R + + +GSEMSGG++
Sbjct: 294 LVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYHGHGG-VTVGSEMSGGVK 352
Query: 375 DVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYG------- 426
++ + + T+ G+R K+A GRGG V++I++ + M + A YG
Sbjct: 353 NLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAISFNLYYGGKSIAET 412
Query: 427 -SHADNHYDPKALPV-IQGINYRDIVADNVSM-----AARLEGISGDPFTGICIANATI 478
+ KA+PV I+ +++I N+++ A L+G+ I I+N T+
Sbjct: 413 LEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEISNLTV 471
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 201/447 (44%), Gaps = 79/447 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ ++ DFG VGDG T+AF AI+ L + GG +L VPAG W TG L S+ L
Sbjct: 48 NEVNLKDFGAVGDGMHLCTEAFAKAIDALDK---KGGGKLTVPAGVWFTGPIVLKSNINL 104
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K A +L S D++ +P+++ + G D R S I G NL +V +TG G IDG
Sbjct: 105 HIEKGAIVLFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLVNVAITG-QGAIDG 158
Query: 235 QGALWW----QQFHKGKLK----------------------------------------- 249
G W Q+ +G+ K
Sbjct: 159 NGHYWRPLKKQKVTEGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLKTEEE 218
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ F+ N+ + + NSP+WN+HP+ N+L++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNG 278
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + +KSG DE G + +++ T + +
Sbjct: 279 DGLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGHGGFV 338
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWA 418
+GSEMSGG++++ + + + T+ G+R K+ GRGG V++I++R ++M + +
Sbjct: 339 -VGSEMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVTFN 397
Query: 419 FWMTG-------NYGSHADNHYDP----KALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+ G G P + P + I+ + N A GI P
Sbjct: 398 LYYGGKSAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPEMP 457
Query: 468 FTGICIANATIGMAAKHKKVPWTCADI 494
GI + + I ++AK+ + C +I
Sbjct: 458 IDGITLKH--IRISAKNDAEFYYCKNI 482
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 196/432 (45%), Gaps = 78/432 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ SI +FG VGD T N +AF AI Q+S+ GG ++ VP G WLTG + S+ L
Sbjct: 57 YAVSIVEFGAVGDAVTPNGEAFTRAIEQVSE---KGGGRVIVPRGIWLTGPIQMKSNINL 113
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L A + S + +E+P+IK + G D R S I NL ++ +TG NG IDG
Sbjct: 114 HLEDGAVIRFSSNFDEYPLIK---TSFEGLDTY--RCISPIHAHNLENIAITG-NGVIDG 167
Query: 235 QGALW------------WQQF--------HKGKL-------------------------- 248
G W W++ GK+
Sbjct: 168 NGDAWRPVKKSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFNVPDFDNRDA 227
Query: 249 -----KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ I + T NSP+WN+HP+ S ++ ++ +TI P S N
Sbjct: 228 FEEVKDFLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQNG 287
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + KSG +E G G+PT+ ++++ + +
Sbjct: 288 DGLDLESCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVYHGHGGFV 347
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWA 418
+GSEMSG +++V D + T+ G+R K+ GRGG V++IY+ + M +++
Sbjct: 348 -VGSEMSGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFN 406
Query: 419 FWMTGNY-----GSHADNHYDP-------KALPVIQGINYRDIVADNVSMAARLEGISGD 466
+ GN G ++ +P + P + I ++I A+ AA G+
Sbjct: 407 LFYGGNAPVMDDGDNSAPSEEPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMGLPEM 466
Query: 467 PFTGICIANATI 478
+ + NA +
Sbjct: 467 NLQNVHLENAVL 478
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 194/440 (44%), Gaps = 78/440 (17%)
Query: 106 EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGS 165
E A + ++ DFG VGDG T T+AF AI++LS+ GG +L VP G W TG
Sbjct: 42 ELKAPAIPDRQVNLKDFGAVGDGTTLCTEAFAKAIDKLSE---QGGGKLIVPGGVWFTGP 98
Query: 166 FNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIV 225
L S+ L+L A + S D + +PVIK R R S + ++ +
Sbjct: 99 IVLKSNINLHLEVGAVIQFSGDESLYPVIKTSFEGLETR-----RCQSPLSANGAKNIAI 153
Query: 226 TGDNGTIDGQGALWWQQFHKGKL------------------------------------- 248
TG G IDG G +W+ +GK+
Sbjct: 154 TGQ-GVIDGNGQ-FWRPVKRGKVTDGQWKEILARPGGVEAKKGYWVPNQAYADAEKNADM 211
Query: 249 ---------------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
++ RP ++ + N+ + + NSP+WN+HP+ N+++ G+
Sbjct: 212 NVPRAETDEEWNAIKRFLRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVL 271
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
P + N D ++ +SC N + + +GDD + +KSG DE G G P + +V+
Sbjct: 272 ARNPSYAQNGDALDLESCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGC 331
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH 413
T + + + +GSEMSGG++++ + + + T+ G+R K+ GRGG V++I++ ++M
Sbjct: 332 TVFAGHGGFV-VGSEMSGGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMT 390
Query: 414 TMKW-AFWMTGNYG--------SHADNHYDPKALPV------IQGINYRDIVADNVSMAA 458
+K A YG + DN + +PV + I+ R+IV A
Sbjct: 391 DIKTDAITFNMYYGGKSVAEMLADGDNPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAM 450
Query: 459 RLEGISGDPFTGICIANATI 478
G+ P I + N I
Sbjct: 451 EFNGLPEMPIENINLENVHI 470
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 186/408 (45%), Gaps = 81/408 (19%)
Query: 72 LRSQVTKLVPLLIVVALLSQRGAESRKARRLDS---------FEYNAIS---CRAHSASI 119
++ +L LI+V +L + D+ FE IS + +I
Sbjct: 1 MKKNSDRLKWCLIIVMMLPNLACSVHSVEQEDTLKSLYKDVEFEMPVISEPQFPDYVVNI 60
Query: 120 TDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKD 179
+DFG +GDG T N++AF +I+ ++ ++GG ++ V G WLTG + S+ LYL
Sbjct: 61 SDFGAIGDGITDNSEAFAASIDDVA---ANGGGKVVVSRGIWLTGPIKMKSNINLYLEDG 117
Query: 180 AFLLASQDLNEWPVIKP----LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
A +L S D +++P+I+ L +Y R S I NL ++ TG NG DG
Sbjct: 118 AVVLFSSDFDKYPLIETSFEGLETY---------RCMSPIHAHNLENIAFTG-NGVFDGS 167
Query: 236 GALW------------WQQF--------HKGKLKY------------------------- 250
G W W+ GK+ Y
Sbjct: 168 GDAWRPVKKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDLSSKEEY 227
Query: 251 ------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
RP ++ + + T NSP+WN+HP+ S N++++ +TI P S N D
Sbjct: 228 EKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGD 287
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIA 364
G++ +SC N I + GDD + KSG +E G GMPT+ ++++ + +
Sbjct: 288 GLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVYHGHGGFV- 346
Query: 365 LGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG+++V + T++G+R K+ GRGG V++IY+ + M
Sbjct: 347 VGSEMSGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDM 394
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 172/382 (45%), Gaps = 48/382 (12%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
+G +N +A + A+ + G L + AG W + L S+ T +L + A L A
Sbjct: 101 EGARANAEALETAVAAVPH-----GGTLRLAAGLWTSFPVRLKSNMTFHLAEGAVLRAPS 155
Query: 187 DLNEWPVIKPLPSYGRGRDAAA---GRYTSLIFGTNLTDVIVTG-DNGTIDGQGAL---- 238
WP+ LP+ RD A G + L V G DN I+G+G L
Sbjct: 156 SRKAWPI---LPA----RDDAGHMLGSWEGLPDACFAAPVQAIGTDNLIIEGRGVLDGSG 208
Query: 239 ----WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
WW + + RP + + IQ+ T+ N+ SW +HP +++ G+TI
Sbjct: 209 DRGDWWSWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTI 268
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW-------DEYGIAYGMPTKQ 347
AP SPNTDG NP+SC N I GDDC+AVK+G D G+ +
Sbjct: 269 NAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGIRVRH 328
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
++ R + +GSEMSGG+ DV ED + T+ G+R+KT GRGG V +I +
Sbjct: 329 CLMER------GHGGLVIGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAM 382
Query: 408 RGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVADNVSMA 457
R + + ++ A +Y AD H + K P I GI D+ N++ A
Sbjct: 383 RRVLLDGVQTALSANAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHA 442
Query: 458 ARL-EGISGDPFTGICIANATI 478
A + G+ P + I N TI
Sbjct: 443 AGVFLGLPEAPIRNVAIRNLTI 464
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 201/428 (46%), Gaps = 77/428 (17%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI ++G VGDG T+N++AFK AI ++S + GG ++ VP G WLTG L+ + L+L
Sbjct: 52 SIMEYGAVGDGLTNNSQAFKAAIEEVS---NQGGGKVLVPRGIWLTGPITLLDNVNLHLE 108
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ + S++ +E+P+++ + G + R S I + ++ +TG NGTIDG G
Sbjct: 109 DGSLITFSKNKDEYPLVE---TSFEGLNTF--RCLSPINAYRVENIAITG-NGTIDGSGE 162
Query: 238 LW---------------------------W---QQFHKG-------------------KL 248
W W Q F G K+
Sbjct: 163 AWRAVKRSKMTDSQWNELVSSGGIVVGTNWFPSQSFLDGHNASSSFNVPDVTDRKELEKM 222
Query: 249 K-YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGIN 307
K + RP ++ + + + T NSP+WN+HP+ S +++++ +T+ P S N DG++
Sbjct: 223 KDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGDGLD 282
Query: 308 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGS 367
+SC N I + GDD + KSG D G GMPT+ ++++ + +GS
Sbjct: 283 LESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNIVYHGHGG-FTVGS 341
Query: 368 EMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTMKWAFWMT 422
EMSGGI++V + + T+ G+R K+ GRGG V++I++ + M +++ + +
Sbjct: 342 EMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINMINIPAEAIRFNMFYS 401
Query: 423 GN-----YGSHADNHYDPKAL-------PVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
GN +A++ + L P + I +DI +AA G+
Sbjct: 402 GNAPVLEEDQNAEDEARKEELAPVTEETPSFRNIFMKDIQVTGSGVAAFFMGLPEMKLQN 461
Query: 471 ICIANATI 478
+ + NA +
Sbjct: 462 VKLENAVL 469
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 189/429 (44%), Gaps = 73/429 (17%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +I+ G V DG T NT A AI+Q ++ GG + VP G WLTG L S+
Sbjct: 35 RKDTIAISKLGAVADGLTLNTAAINKAIDQCTKA---GGGVVLVPRGLWLTGPVTLKSNV 91
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L K A L + +P+I + G +A R + I G L ++ +TG+ G +
Sbjct: 92 NLHLAKGALLQFTNRREVYPLIN---TTWEGEEAI--RNQAPISGVGLENIAITGE-GIL 145
Query: 233 DGQGALW------------WQQ------------------------------------FH 244
DG G W W++ ++
Sbjct: 146 DGAGEAWRMVKKGKLTSDQWKKLVASGGVLNDKQDTWYPTAQSLKGASEPVKAGQPMTYY 205
Query: 245 KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
+G + RP ++ I + +T NSP+W +HP+ +I ++ +T P + N D
Sbjct: 206 EGIKDFLRPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGD 265
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIA 364
G++ +SC N ++DC GDD + +KSG DE G G+PT+ + +R + +
Sbjct: 266 GLDLESCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSRVYHAHGGFV- 324
Query: 365 LGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGN 424
+GSEMSGG++++ + + T+ G+R KTA GRGG V++I+V G+ M + +
Sbjct: 325 IGSEMSGGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDIAGEAILFDM 384
Query: 425 YGSHAD---NHYDPKALPVIQ------------GINYRDIVADNVSMAARLEGISGDPFT 469
Y + D + LPVIQ R++ A + G+
Sbjct: 385 YYAAKDPVPQQGESNELPVIQPQPLSEATPQFRSFQIRNVTCKGAETAILIRGLPEMAVK 444
Query: 470 GICIANATI 478
I I NA +
Sbjct: 445 DILIENAVL 453
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 190/427 (44%), Gaps = 68/427 (15%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG + DG T NT+A +AI ++ S GG ++ +P G WLTG L+S+ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAIKAVN---SKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ S D + +P+I + G D R S I N ++ +TG +G DG
Sbjct: 114 YAEKNALIVFSSDTSLYPIID---TSFEGLDTK--RCQSPISAMNAENIAITG-SGVFDG 167
Query: 235 QGALW------------WQQF--------HKGKLKY------------------------ 250
G W W+ GK+ Y
Sbjct: 168 AGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITD 227
Query: 251 ---------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
RP ++ + + I + +T NSP W +HP+ ++ + + + P S
Sbjct: 228 EEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQ 287
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N + +C+ +GDD + +KSG DE G G P + ++I+ T + +
Sbjct: 288 NGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGG 347
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + T+ G+R K+ GRGG V++I++ + M +
Sbjct: 348 FV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALT 406
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + D+ P + PV + I +++ A G+ P I I N
Sbjct: 407 MDLYYAVNDSPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNM 466
Query: 477 TIGMAAK 483
T+ A K
Sbjct: 467 TVTNAKK 473
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 196/434 (45%), Gaps = 77/434 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S SIT+FG V DG T NT+AF AI +++ GG ++ VPAG WLTG L S+ L
Sbjct: 57 YSRSITEFGAVADGITLNTEAFDKAIKAVAE---KGGGKVIVPAGLWLTGPIVLQSNINL 113
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
YL ++A +L + D ++P++K R R S I N ++ +TG G +DG
Sbjct: 114 YLEENALVLFTADHTQYPIVKTSFEGLETR-----RCQSPISALNAENLAITG-KGVMDG 167
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W++ +G +K
Sbjct: 168 NGDTWRPVKKGKMTANQWKKLVDSGGVLDESGRIWYPSEGSIKGAMACKNFNVPEGINTD 227
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ F+ + + +T NSPSW +HP+ +I + I++ P S
Sbjct: 228 EEWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQ 287
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC I++ +GDD + +KSG DE G G P + ++IR + +
Sbjct: 288 NGDALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLHGHGG 347
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK-----DIYVRGMTMHTMK 416
+ +GSEMSGG++++ ++ + T+ G+R K+ GRGG V+ +I + + +
Sbjct: 348 FV-VGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGLI 406
Query: 417 WAFWMTGNYGSHADNHYDP---------KALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+ + G D + +P + P + I +++ A NV A G+ P
Sbjct: 407 FDLFYGGKAPGEGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEMP 466
Query: 468 FTGICIANATIGMA 481
I I N T+ A
Sbjct: 467 IKNIHIENVTMSDA 480
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 178/364 (48%), Gaps = 33/364 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ F GDG T +T A + AI S ++++P G + T + L S+ TL L
Sbjct: 85 NVKHFNAKGDGITDDTLAIQAAI-----MSCPDDGRVFIPKGTYATKTIFLKSNLTLELE 139
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAA-----------GRYTSLIFGTNLTDVIVT 226
K A LL S + LP Y + + +T+LI G N+++V +
Sbjct: 140 KGATLLYSASFESGAI---LPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNLI 196
Query: 227 GDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G+ G +DG G++ W F K + RP L + +++ ++ + +TL NSPSW VHP++S +
Sbjct: 197 GE-GVLDGNGSIGWWDFPKVRNVAWRPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFSDD 255
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + II P SPNTDG++P+SC I + GDDC+A+KSG G ++
Sbjct: 256 LKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASE 315
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
+ IR + + A + +GSEM+GG++ + E T+ G+RIKT GRG V+D
Sbjct: 316 YITIRNCSMNFGHGA-VVIGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRGEAAIVED 374
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIVADNV 454
+ R + M + + Y D H + + LPV I+ + DI +
Sbjct: 375 VTFRHIEMEKVLTPLVVNCFYFCDPDGHSEYVKTKETLPVDYRTPDIRDFCFEDIKCRHS 434
Query: 455 SMAA 458
+AA
Sbjct: 435 EIAA 438
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 208/425 (48%), Gaps = 50/425 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGK-WLTGSFNLISHFTLYLH 177
ITDFG VGDGKT +AF+ AI + S +GG ++ VPAG ++ G S+ ++L
Sbjct: 49 ITDFGAVGDGKTLCKEAFEKAI---TICSDNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 178 KDAFLLASQDLNEWPVIKPLPSY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K A L S + +++ LP+ R Y+ LI+ ++ ++ +TG+ GT++G G
Sbjct: 106 KGAILDFSTNESDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALTGE-GTVNGNG 159
Query: 237 ALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
+ + ++ G+ RP +E N++I +T++
Sbjct: 160 SKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRIFGEGYKLRPGFIEPFGCANVRIEGVTIM 219
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP W +HP++ +N++V+ +T+ + + N DG +P+SC N IE C +GDD +A+KS
Sbjct: 220 DSPFWVIHPIFCNNVIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKS 277
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D G PT+ +VIR + S + + +GSE++GG++++ E+I + + +
Sbjct: 278 GRDNDAWRIGQPTENVVIRNCSFRSKING-VCIGSEIAGGVRNIFIENITIPKSSNAIYF 336
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFW-MTGNY-GSHADNHYDPKALPVIQGINYRDIV 450
K+ + RG Y++D+YVR + T++ A NY G + H +I+ + +
Sbjct: 337 KSNLDRGAYIQDVYVRNVQADTVRTALIRFEPNYKGERSAFHPTLFDSFLIENVTCKQSN 396
Query: 451 ADNVSMAARLEGISGDPFTGICIANATIGMA------AKHKKVPWTCADIGGMTSGVTPP 504
+ MA G + P I + N TIG + + + + G P
Sbjct: 397 ECGIYMA----GFAERPLQNIVLKNVTIGKVPTPYCFQNGENIRFQSVKVNGKKLDEKPT 452
Query: 505 PCELL 509
P EL+
Sbjct: 453 PKELV 457
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 195/421 (46%), Gaps = 62/421 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+TDFG VGDG T AF+ + ++ GG ++ VPAG +LTG + S+ LY+ K
Sbjct: 40 VTDFGAVGDGIMDCTDAFRRV---MMAANTAGGGRVVVPAGIYLTGPIHFKSNVNLYVSK 96
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
+A + SQDL ++ P++ R Y+ LI+ ++ +TG+ G +DG G
Sbjct: 97 EATVKFSQDLEKYLPMV-----LNRFEGVELYNYSPLIYSYGAVNIAITGE-GILDGNGD 150
Query: 237 -ALWWQ------------QFHK----------------------GKLKYTRPYLMEFMYT 261
WW Q H+ G Y RP ++F +
Sbjct: 151 NEHWWPWKGLTQYGWQEGQAHQAEDRDVLFAMAEQNVPVEERKFGSGHYLRPSFIQFYNS 210
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
NI I +T+ +SP W + PV NI + + I+ PNTDG NPDSC N I++CY
Sbjct: 211 KNILIEGITVKDSPMWQISPVLCENITIDKVKIVG--HGPNTDGFNPDSCKNILIKNCYF 268
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED- 380
+GDDC+A+KSG + G +P + +VI+ + I +GSE+SG +++V A+
Sbjct: 269 NNGDDCIAIKSGRNGDGRRINIPCENIVIQN-NYMKDGHGGITIGSEISGSVRNVFADHN 327
Query: 381 -IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHYDPKAL 438
+ + N + +R KT RGG +++IY + T+ ++ + F + +Y Y P
Sbjct: 328 VMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIVDMDYEEGDAGEYTPIV- 386
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHK-KVPWTCADIGGM 497
R+I +N+ GI + I+N H + P+ ++ G+
Sbjct: 387 --------RNIFVENLESYGGKTGILMSAYDRTPISNVQFTNCILHNVETPFVLKNVEGL 438
Query: 498 T 498
Sbjct: 439 V 439
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 207/425 (48%), Gaps = 50/425 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGK-WLTGSFNLISHFTLYLH 177
ITDFG VGDGKT + F+ AI + S +GG ++ VPAG ++ G S+ ++L
Sbjct: 49 ITDFGAVGDGKTLCKEPFEKAI---TICSDNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 178 KDAFLLASQDLNEWPVIKPLPSY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K A L S + +++ LP+ R Y+ LI+ ++ ++ +TG+ GT++G G
Sbjct: 106 KGAILDFSTNESDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALTGE-GTVNGNG 159
Query: 237 ALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
+ + ++ G+ RP +E N++I +T++
Sbjct: 160 SKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRVFGEGYKLRPGFIEPFGCANVRIEGVTII 219
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP W +HP++ SN++V+ +T+ + + N DG +P+SC N IE C +GDD +A+KS
Sbjct: 220 DSPFWVIHPIFCSNVIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKS 277
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D G PT+ +VIR + S + + +GSE++GG++++ E+I + + +
Sbjct: 278 GRDNDAWRIGQPTENVVIRNCSFRSKING-VCIGSEIAGGVRNIFIENITIPKSSNAIYF 336
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFW-MTGNY-GSHADNHYDPKALPVIQGINYRDIV 450
K+ + RG Y++D+YVR + T++ A NY G + H +I+ + +
Sbjct: 337 KSNLDRGAYIQDVYVRNVQADTVRTALIRFEPNYKGERSAFHPTLFNSFLIENVTCKQSN 396
Query: 451 ADNVSMAARLEGISGDPFTGICIANATIGMA------AKHKKVPWTCADIGGMTSGVTPP 504
+ MA G + P I + N TIG + + + I G P
Sbjct: 397 ECGIYMA----GFAERPLQNIVLKNVTIGKVPTPYCFQNGENIRFQSVKINGKKLDEKPT 452
Query: 505 PCELL 509
P EL+
Sbjct: 453 PKELV 457
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 203/410 (49%), Gaps = 38/410 (9%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
SFE +SC ++ G VGDG T NT+ ++A++ L+ + L P G+WLT
Sbjct: 185 SFECPVLSC----VNVALAGAVGDGMTVNTETIQNALDSLTMKAQGRTQTLAFPPGRWLT 240
Query: 164 GSFNLISHFTLYLH-KDAFLLASQDLNEWPV--IKPLPSYGRGRDAAAGRYTSLIFGTNL 220
G L S+ + L +FL A + + WP+ K PS D + + I N
Sbjct: 241 GPLELKSNVKIVLDGPRSFLEAVKSTDLWPIDDWKEHPSLPS--DDPTPIFRAFIHAYNQ 298
Query: 221 TDVIVTGDNGTIDGQGALWWQQFHKGKLKYTR--------PYLMEFMYTDNIQISSLTLL 272
T++ ++G GTI+G G WW + K KY+ P L+ + +++I ++ L
Sbjct: 299 TNIEISG-GGTINGHGDFWWDR--KTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENIVLT 355
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD--DCVAV 330
NSP + V P Y + + V I I P SP T+G+ DS +N+ + D +I +GD D VA+
Sbjct: 356 NSPHFTVRPQYCNKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAI 415
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDI--KAINTES 388
KSG D +G +P+K + + +T + ++ +++GSEMSGG+ ++ DI N +
Sbjct: 416 KSGKDYHGRKANVPSKNIRVEHVTILGGHA--LSVGSEMSGGVSNIIFSDITFDGRNNKF 473
Query: 389 GV---RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP---KALPVIQ 442
GV R+KT GRGG V I + + +A + Y S D + P + P+++
Sbjct: 474 GVGSARVKTMRGRGGVVDQITFQNIRGWNALYALELY-EYYSKQDTNVGPVSREETPIVK 532
Query: 443 GINYRDIVADNVS-MAARLEGISGDPFTGICIANATIGMAAKHKKVPWTC 491
IN++++ + + A + G+ + + I N + + HK W C
Sbjct: 533 NINFKNVHIEGIKRYAGVIAGLPEMAVSNLVIEN--VHLTNVHKG--WNC 578
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ DFG VG+G+ T AF AI+ L++ GG L VPAG W TG L S+ L
Sbjct: 48 RKVNLADFGAVGNGEELCTAAFAKAIDTLAE---KGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K A +L S D++ +P+++ + G D R S + G NL +V +TG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGE-GAIDG 158
Query: 235 QGALW------------WQQ-FHKGKL--------------------------------- 248
G W W+Q +G +
Sbjct: 159 NGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEE 218
Query: 249 -----KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP ++ + N+ + + NSP+WN+HP+ N+L++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ +SC N I + GDD + +KSG DE G G + +V+ T + +
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFV 338
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG+++V + + + T+ G+R K+ GRGG V++I++R + M
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 179/367 (48%), Gaps = 33/367 (8%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ ++ DFG G G+ +T + + AI S ++ +P G +LT L S+ TL
Sbjct: 83 TLNVKDFGATGTGEKHDTASLQAAI-----MSCPPSGRVLIPEGTYLTAPLYLKSNITLE 137
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDA---------AAGRYTSLIFGTNLTDVIVT 226
+ K A LL S ++P++ G+D + SL+ G + +V +
Sbjct: 138 IQKGAKLLGSNVREDYPILPGTTKTTDGKDEFYLGSWEGDPMDCFASLLTGIGVNNVKII 197
Query: 227 GDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
G G IDG + WW+ K ++ + RP L+ +I I +T+ NSPSW +HP++S
Sbjct: 198 G-KGIIDGNASFDNWWKDAKKKRVAW-RPRLIFIKNCRDILIEEVTVQNSPSWTIHPMFS 255
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
N+ + + +I P SPNTDGINP+SC N +I GDDC+A+KSG G +
Sbjct: 256 QNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGKLYLGQRLKIA 315
Query: 345 TKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GY 401
++ ++IR C + I +GSEM+GG+++V A T+ G+RIKT GRG G
Sbjct: 316 SQDIMIR--NCHMKFGHGGIVIGSEMAGGVKNVSAIRCIFEETDRGIRIKTRRGRGKDGV 373
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVA 451
+ I + M + F + Y D + + PV++ + ++++
Sbjct: 374 INGINAENIVMKKVLTPFVINTFYFCDPDGKTEYVWSKEKLPVDERTPVVKNVYLKNMIC 433
Query: 452 DNVSMAA 458
++ +AA
Sbjct: 434 EDCEVAA 440
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 188/427 (44%), Gaps = 68/427 (15%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG + DG T NT+A +AI +S S GG ++ +P G WLTG L+S+ L
Sbjct: 57 YEVNIRDFGALSDGVTLNTEAINNAIKAVS---SKGGGKVIIPEGLWLTGPVVLLSNVNL 113
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ S D + +P+I + G D R S I N ++ +TG NG DG
Sbjct: 114 YAEKNALIVFSSDTSLYPIID---TSFEGLDTK--RCQSPISAMNAENIAITG-NGVFDG 167
Query: 235 QGALW------------WQQF--------HKGKLKY------------------------ 250
G W W+ GK+ Y
Sbjct: 168 AGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITD 227
Query: 251 ---------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
RP ++ + + I + +T NSP W +HP+ ++ + + + P S
Sbjct: 228 EEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQ 287
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N + +C+ +GDD + +KSG DE G G + ++I+ T + +
Sbjct: 288 NGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKNNTVLHGHGG 347
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + T+ G+R K+ GRGG V++I++ + M +
Sbjct: 348 FV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALT 406
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + D P + PV + I +++ A G+ P I I N
Sbjct: 407 MDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNM 466
Query: 477 TIGMAAK 483
T+ A K
Sbjct: 467 TVTNAKK 473
>gi|302143794|emb|CBI22655.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 105/150 (70%), Gaps = 7/150 (4%)
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH-ADNHYDPKALPVIQGINYRDI 449
IKT + RGGYVKDIYVR MTM TM++AFW+ G+YG A H P VI+GINYRD+
Sbjct: 4 EIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPPAPGHEGP----VIEGINYRDM 59
Query: 450 VADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
VADNV+ A+L GISG PFTG CI+N TIG+ + +K W C ++ G+TS VTP PC+LL
Sbjct: 60 VADNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLL 119
Query: 510 PDQGPEKIRACDFPTESLPIDMVEMKKCTY 539
++I C FP + LPI+ V+++ C+Y
Sbjct: 120 SPS--KEILNCPFPKDLLPIEDVKLRICSY 147
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 184/427 (43%), Gaps = 76/427 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ ITD+G VGDG NT AF AI ++ GG ++ +P G W TG L S L
Sbjct: 18 YTVMITDYGAVGDGVYDNTLAFHQAIEACAKA---GGGKVVIPPGIWHTGPLTLQSRIEL 74
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ A ++ S+ +P+ + +Y GR R S + G L D+ TG +G DG
Sbjct: 75 HASAGALVMFSKQFEAYPI--RMSAY-EGRQMF--RCQSPLDGEGLEDIAFTG-SGIFDG 128
Query: 235 -----------------------------QGALWWQ----------------------QF 243
G LWW Q
Sbjct: 129 GGEAWRPVKQGKLTESQWDRLIHTGGVVDDGGLWWPTPAARDGMENLARIEQTGSRNPQD 188
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
++ Y RP L+ I ++ T NS +W +HP S I +Q IT+ P + N
Sbjct: 189 YEPVRDYLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNG 248
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ DSC +E+ GDD + +KSG +E G G P++++ IR T + I
Sbjct: 249 DGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGG-I 307
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH-----TMKWA 418
+GSEMSGGI+DV D I T+ G+R K+ GRGG V++I++ + M + +
Sbjct: 308 VVGSEMSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREIDGDAISFN 367
Query: 419 FWMTGNYGSHADNHYDPKAL-------PVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+ G GS Y +A+ PV + I +DIV A + G+ P +
Sbjct: 368 LYYEGKAGS---GEYQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENV 424
Query: 472 CIANATI 478
+ + I
Sbjct: 425 TVMRSAI 431
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 194/404 (48%), Gaps = 54/404 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I +G GDGK+ +T AFK AI ++ GG ++ VP G ++TG+ L S+ L++
Sbjct: 50 NIKRYGAAGDGKSDSTAAFKKAIEAANKA---GGGRVVVPPGIYVTGAIYLKSNVNLHVM 106
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K A + SQ+ +++ LP+ R Y+ LI+ N ++ +TG+ GT+DGQG
Sbjct: 107 KKATIKFSQNPDKY-----LPAVLTRWEGVELYNYSPLIYAYNEKNIAITGE-GTLDGQG 160
Query: 237 --ALWW----------------QQFHK------------------GKLKYTRPYLMEFMY 260
WW QQ + GK Y RP ++ +
Sbjct: 161 DNEHWWPWKGKKEFGWKEGEPNQQQDRDLLFKMAEEKVPVKERVFGKGHYLRPSFIQPYH 220
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ NI I +T+LNSP W ++PV S NIL+ + II PN DG++P+S N I+D Y
Sbjct: 221 SKNIMIKGVTILNSPMWQINPVLSENILIDDVKIIG--HGPNNDGVDPESSKNVLIKDSY 278
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG + G +P++ ++I + + +GSE+SG +++V A+
Sbjct: 279 FDNGDDCIAIKSGRNADGRRINVPSENIIIEGNEMKDGHGGVV-IGSEISGSVRNVFAQH 337
Query: 381 --IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ + N + +RIKT RGG ++DI T+ ++ Y D
Sbjct: 338 NVMDSPNLDRALRIKTNSVRGGTIEDIDFSNNTVKSVGSEVIQIDMYYEEGDTG---NFT 394
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
PV++ IN ++ ++ + P T + I ++ A
Sbjct: 395 PVVRNINIENLQSNGGKYGLWIRAYERSPVTNLTIRHSNFQHVA 438
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S +I DFGG DG NT+A DAI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 56 YSVNIVDFGGKNDGVALNTQAINDAIKAVNAH---GGGKVIIPEGIWLTGPIELLSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ + D + +P+IK + G D R S I N ++ +TG G DG
Sbjct: 113 YTEKNALVVFTDDFSAYPIIK---TSFEGLDTR--RCQSPISARNAENIAITG-YGVFDG 166
Query: 235 QGALW------------WQQFHK--------------GKLK------------------- 249
G W W+ K G LK
Sbjct: 167 SGDSWRPVKKGKLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNNPEGIDTDEE 226
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNG 286
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
D ++ +SC N I + +GDD + +KSG DE G G P + +V++ T + + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLHGHGGFV 346
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG++++ D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 347 -VGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 174/385 (45%), Gaps = 64/385 (16%)
Query: 83 LIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQ 142
L LL+ A S+ +L S + IT FG V DG T NTK+ + AI+
Sbjct: 6 LFSFLLLTALNARSQAVWKLPEVAQTKFSGSVYP--ITKFGAVPDGYTLNTKSIQAAIDA 63
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGR 202
+ + GG + VP G WLTG L S+ L L A LL ++D ++P++K
Sbjct: 64 CT---AKGGGVVAVPPGLWLTGPLTLKSNVNLNLAAGATLLFTKDKTQYPLVK-----AN 115
Query: 203 GRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------------WQQ-------- 242
R S I N ++ +TG NG IDG G W W+
Sbjct: 116 WEGFEQMRNQSPISAKNAVNIAITG-NGIIDGNGDAWRMVKKDKLTESQWKNLVASGGVL 174
Query: 243 --------------------------------FHKGKLKYTRPYLMEFMYTDNIQISSLT 270
F++ + RP L+ D + + +T
Sbjct: 175 AEGGKTWMPSESYAKGNAMKDPGRLSPDKDAAFYQSVKDFFRPNLVVLTSCDKVLLEGVT 234
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
NSP+W +HP+ S NI V+ + + P + N DGI+ +SC+N IE+ GDD + +
Sbjct: 235 FQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGIDLESCSNVLIENSKFDVGDDGLCM 294
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
KSG D G MPTK ++IR T + + + +GSEMSGG+ +V + I ++ G+
Sbjct: 295 KSGRDADGRKRAMPTKDVIIRGCTVYAAHGGFV-VGSEMSGGVNNVYVSNCTFIGSDIGL 353
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTM 415
R KT GRGG V++I+++ + M +
Sbjct: 354 RFKTTRGRGGIVENIFIKDIFMKDI 378
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 190/434 (43%), Gaps = 77/434 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
HS SIT+FG V DG T NT+AF I+ +SQ GG + VPAG WLTG L S+ L
Sbjct: 57 HSRSITEFGAVADGITLNTEAFAQTIDAVSQ---QGGGTVVVPAGLWLTGPIVLKSNINL 113
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L ++A +L + D ++P+IK R R S + ++ +TG G +DG
Sbjct: 114 HLEENALVLFTADHTQYPIIKTSFEGLETR-----RCQSPVSANGAENIAITG-KGVMDG 167
Query: 235 QGALW------------WQQF--------HKGKLKY------------------------ 250
G W W + KG + Y
Sbjct: 168 NGDTWRPVKKGKMTASQWNKLVASGGVLNEKGDIWYPSEGSIKGANACKDFNVPEGIETE 227
Query: 251 ---------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
RP L+ F+ + + +T NSPSW +HP+ ++ V I++ P S
Sbjct: 228 EDWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQ 287
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC + + +GDD + +KSG DE G G P + ++IR + +
Sbjct: 288 NGDALDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVVLHGHGG 347
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK-----DIYVRGMTMHTMK 416
+ +GSEMSGG++++ ++ + T+ G+R K+ GRGG V+ +I + + +
Sbjct: 348 FV-VGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEALI 406
Query: 417 WAFWMTGNYGSHADNHYDPK---------ALPVIQGINYRDIVADNVSMAARLEGISGDP 467
+ + GN D PK P + I +++ A NV A G+ P
Sbjct: 407 FDLFYGGNAPGEGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGLPEMP 466
Query: 468 FTGICIANATIGMA 481
I + N TI A
Sbjct: 467 IKNIFLENVTISDA 480
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 192/428 (44%), Gaps = 77/428 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ ++ DFG V G NTKAF DAI+ LS+ GG +L +P G WLTG L S+ L
Sbjct: 49 YNVNLKDFGAVNGGYVLNTKAFADAIDALSK---KGGGKLIIPPGIWLTGPIILKSNIEL 105
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ + A + S D + +P+I+ S+ R S I+G NL ++ TG NG DG
Sbjct: 106 HAERGALIKFSTDKSLYPIIET--SF---EGLNTWRCISPIYGKNLENIAFTG-NGVWDG 159
Query: 235 QGALW------------WQQF--------------------------------HKGKLK- 249
G W W++F H K K
Sbjct: 160 SGEAWRQVKKSKLTDEQWKKFVASGGVLNEKKDSWYPSEQYLKGAKGADQNIRHDLKTKE 219
Query: 250 -------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
+ RP L+ + + NSP+WN+HP+ +++V+ +T+ P S N
Sbjct: 220 DFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQN 279
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG++ +SC N IE+ GDD + +KSG D+ G G+P + ++++ +
Sbjct: 280 GDGLDVESCKNVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYHGHGG- 338
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWM 421
+ +GSEMSGG++++ + + T+ G+R K+ GRGG V++IY+ + M + A
Sbjct: 339 VTVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQAISF 398
Query: 422 TGNYG--------SHADNHYDPKALPV------IQGINYRDIVADNVSMAARLEGISGDP 467
YG + N KA+PV + I+ ++I A L+G+
Sbjct: 399 DLYYGGKSIAETLAEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGLPEMN 458
Query: 468 FTGICIAN 475
I I N
Sbjct: 459 LENIEITN 466
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 155/313 (49%), Gaps = 25/313 (7%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ S+ DFG GDG + +T + + AIN L +LY P G +LT L SH TL
Sbjct: 76 AVSVRDFGAKGDGFSDDTVSIQTAINCLPN-----NGRLYFPEGVYLTAPIVLKSHITLD 130
Query: 176 LHKDAFLLASQDLNEWPVIKPLPS---------YGRGRDAAAGRYTSLIFGTNLTDVIVT 226
+ + A LL D + + VI +G A + +LIF D+ +
Sbjct: 131 ISEKAKLLGLPDQSAYNVIPGTAKDIITGEDIHFGTWEGNAVPMHQALIFAEYAEDIRIV 190
Query: 227 GDNGTIDG--QGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
G G IDG + WW+ + + RP L+ F I + +T+ N+ SW +HP +S
Sbjct: 191 G-RGVIDGNAEAGGWWENVKERNIP--RPRLLFFNRCKLITVHGITVCNAASWQIHPYFS 247
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
S + + I AP SPNTD ++P++C N I C GDDC+A+KSG + G + P
Sbjct: 248 SYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFKQP 307
Query: 345 TKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ IR C+ + + LGSEM+GG++++ E +T+ G+RIKT GRG K
Sbjct: 308 AENHNIR--NCLMQFGHGAVTLGSEMAGGVRNLTVERCIFDHTDRGLRIKTRRGRG---K 362
Query: 404 DIYVRGMTMHTMK 416
D + G+ MK
Sbjct: 363 DAVIDGVLFEKMK 375
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 192/438 (43%), Gaps = 79/438 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S +I DFG DG T NTKA DAI Q++ + GG ++ +P G WLTG L+S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A +L S D + +P+I + G + R S I N ++ +TG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W++ +G LK
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + + + T NSPSW +HP+ NI + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC I + +GDD + +KSG DE G G P + +++ T + +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTM 415
+ +GSEMSGG+ ++ ++ + T+ G+R K+ GRGG V++IY+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 416 KWAFWMTGNYGSHADNHYDPKA----------LPVIQGINYRDIVADNVSMAARLEGISG 465
+ + G N + KA P+ + I +D+ + A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 466 DPFTGICIANATIGMAAK 483
I + N + A +
Sbjct: 469 MRIKNINMENIIVSNAKE 486
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 192/438 (43%), Gaps = 79/438 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S +I DFG DG T NTKA DAI Q++ + GG ++ +P G WLTG L+S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A +L S D + +P+I + G + R S I N ++ +TG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W++ +G LK
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLVASGGVVDTDGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + + + T NSPSW +HP+ NI + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC I + +GDD + +KSG DE G G P + +++ T + +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTM 415
+ +GSEMSGG+ ++ ++ + T+ G+R K+ GRGG V++IY+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 416 KWAFWMTGNYGSHADNHYDPKA----------LPVIQGINYRDIVADNVSMAARLEGISG 465
+ + G N + KA P+ + I +D+ + A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 466 DPFTGICIANATIGMAAK 483
I + N + A +
Sbjct: 469 MRIKNINMENIIVSNAKE 486
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 192/438 (43%), Gaps = 79/438 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S +I DFG DG T NTKA DAI Q++ + GG ++ +P G WLTG L+S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A +L S D + +P+I + G + R S I N ++ +TG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W++ +G LK
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + + + T NSPSW +HP+ NI + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC I + +GDD + +KSG DE G G P + +++ T + +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTM 415
+ +GSEMSGG+ ++ ++ + T+ G+R K+ GRGG V++IY+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 416 KWAFWMTGNYGSHADNHYDPKA----------LPVIQGINYRDIVADNVSMAARLEGISG 465
+ + G N + KA P+ + I +D+ + A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 466 DPFTGICIANATIGMAAK 483
I + N + A +
Sbjct: 469 MRIKNINMENIIVSNAKE 486
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 219/495 (44%), Gaps = 101/495 (20%)
Query: 71 RLRSQVTKLVPLLIVVALLSQRG-AESRKARRLD----SFEYNAISCRA----------H 115
R+R+ ++ LL+V + G A S K R D SF Y+ I +
Sbjct: 2 RVRNVFWRISVLLLVTEVFLTGGFACSEKNERDDQADYSFIYDNIEFDMPRVEEPVFPDY 61
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ SI DFG VGDG N+ AF AI+ +S+ GG ++ VP G WLTG + S+ L+
Sbjct: 62 AVSIVDFGAVGDGVFDNSDAFAQAIDNVSE---KGGGRVVVPRGLWLTGPIIMKSNIDLH 118
Query: 176 LHKDAFLLASQDLNEWPVI----KPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
L A + S D +++P+I + L +Y R S + L ++ TG NG
Sbjct: 119 LEDGAVVHFSSDFDDYPLIDTSFEGLNTY---------RCMSPVHAHGLENIAFTG-NGI 168
Query: 232 IDGQGALW------------WQQ-----------------------------FHKGKLK- 249
DG G W W++ F+ LK
Sbjct: 169 FDGNGDAWRPVKKSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGDSRDNFNVPDLKT 228
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP ++ + + T NSP+WN+HP+ S +I+++ +T+ P S
Sbjct: 229 KEDFEKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWYS 288
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N DG++ +SC N I + GDD + KSG +E G G+PT+ ++++ +
Sbjct: 289 QNGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVVYHGHG 348
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTM 415
+ +GSEMSGG+++V + I T+ G+R K+ GRGG V++IY+ + M +
Sbjct: 349 GFV-IGSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDMIDIPTEPI 407
Query: 416 KWAFWMTGNY------GSHADNHYDPKALPV------IQGINYRDIVADNVSMAARLEGI 463
++ + GN G+ + + K +PV + I ++I A+ AA G+
Sbjct: 408 RFNLFYGGNAPLLDDGGNSVPSGKEAKPVPVTEETPSFRNIFMKNIRANGFGNAAFFMGL 467
Query: 464 SGDPFTGICIANATI 478
I + NA +
Sbjct: 468 PEMNLQNIHLENAVL 482
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 179/366 (48%), Gaps = 36/366 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDGK +T + + AI S G +++ P G +LT L S+ TL L
Sbjct: 85 NVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFPEGIYLTYPLFLKSNITLELG 139
Query: 178 KDAFLLASQDLNEWPVI-------KPLPSY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
K A LL +++ +P++ K SY G A + SLI G + +V + G+
Sbjct: 140 KGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGE- 198
Query: 230 GTIDGQGAL--WWQQFHKGKLKYT--RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
GTIDG + WW H K+K RP + N+ I +T+ NSPSW +HP+ S
Sbjct: 199 GTIDGNSSFDTWW---HDAKVKRIAWRPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQ 255
Query: 286 NILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPT 345
N+ + I P +PNTDG++P+SC + I GDDC+A+KSG + +
Sbjct: 256 NLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSS 315
Query: 346 KQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYV 402
+ L IR C+ Y + +GSEMSGG+++V + T+ G+RIKT GRG G +
Sbjct: 316 ENLYIR--NCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGII 373
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDIVAD 452
+I+ + M + F + Y D + + LPV I I +DI +
Sbjct: 374 DEIHASNIKMDKVLTPFTINSFYFCDEDGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCN 433
Query: 453 NVSMAA 458
+ +AA
Sbjct: 434 DTQVAA 439
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 191/376 (50%), Gaps = 40/376 (10%)
Query: 72 LRSQVTKLVPLLIVVALLSQRGAESRKARRLDSF--EYNAISCRAHSASITDFGGVGDGK 129
++ Q + L+ +++V + A+S D E N ++ + +I DFG V DG+
Sbjct: 10 MQMQKSFLIVFILIVTNTANLAAKSSPWDIADKIVAELNPVTFPDKTYNIADFGAVADGR 69
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFLLASQDL 188
AF AI +Q S GG ++ VPAG + + G S+ ++L A L S +
Sbjct: 70 MPCKGAFDKAI---TQCSDQGGGRIIVPAGTYYMNGPLVFKSNVNIHLEDGAILNFSSNQ 126
Query: 189 NEWPVIKPLPSY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW------Q 241
++ LP+ R Y+ LI+ ++ ++ +TG GTI+G G+ + Q
Sbjct: 127 EDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALTGK-GTINGNGSKKFSAWADNQ 180
Query: 242 QFHKGKLKYT------------------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
K L+ RP +E N++I +T+ +SP W +HP++
Sbjct: 181 NIDKEILRRMGRENLPIYRRIFGEGFRLRPGFIEPYGCVNVRIEGITIKDSPFWVIHPIF 240
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
+N++V+ +T+ + + N DG +P+SC+N IE C +GDD +A+KSG D G
Sbjct: 241 CNNVIVRDVTVDS--HNRNNDGCDPESCSNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQ 298
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
PT+ +VIR T S + + +GSE+SGG+++V E+I + + + + K+ + RGGY++
Sbjct: 299 PTENVVIRNCTFWSKING-VCIGSEISGGVRNVFIENISILKSSNAIYFKSNLDRGGYIE 357
Query: 404 DIYVRGMTMHTMKWAF 419
+IYVR + +++ A
Sbjct: 358 NIYVRNIQADSVRTAL 373
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 188/380 (49%), Gaps = 34/380 (8%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
++ A S + +G GDG T +T A + AI+ + ++ GG + A +++G L
Sbjct: 15 GLAFAAKSCDVKAYGATGDGVTKDTAAIQKAIDDCA--AAGGGTVVLAGAPMYVSGPLVL 72
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
SH TL + L S++ +++P+I+ L GR L+ TD+ + G
Sbjct: 73 KSHITLSIATGTTLAGSEEHDDYPLIEELRESGR---------QPLLSSDKATDITING- 122
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
GTIDG+G WW RP L+ F ++ +I + ++T+ NSPSW + P YS++++
Sbjct: 123 GGTIDGRGQSWWPDRSAAN---KRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLV 179
Query: 289 VQGITIIAP-VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW------DEYGIAY 341
+ +T+ AP S NTDGI+P S ++ IE I +GDD +A+KSG DE
Sbjct: 180 FRNMTVYAPDRVSHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPNSPGGDE----- 234
Query: 342 GMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
P+ +VIR T + + +++GSE++GG+ +V AE I T +GVRIK+ RG
Sbjct: 235 --PSHDIVIRDSTFL--HGHGLSIGSEVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGNE 290
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHA---DNHYDPKALPVIQGINYRDIVADNVSMAA 458
+K R + M + ++ Y D+ + P I ++ A AA
Sbjct: 291 LKHFVYRDLKMEDVNTPILISEFYPKIPDVIDSQPVGRLTPRFSDITIENLTATGARQAA 350
Query: 459 RLEGISGDPFTGICIANATI 478
+ G+ P TG+ + N I
Sbjct: 351 IIVGLPESPVTGLKLTNVRI 370
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 143/272 (52%), Gaps = 11/272 (4%)
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGR 202
L + ++ GG ++ VPAG TG+ L S L+L A L D +P ++ R
Sbjct: 24 LDEAAAAGGGRVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPALYPAVE-----AR 78
Query: 203 GRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH--KGKLKYTRPYLMEFMY 260
A ++ ++ DV +TG GTIDG G WW F + +L + RP L+
Sbjct: 79 WEGAVGRVHSPCLYAHGERDVAITG-LGTIDGGGQTWWDTFRHRREELAHPRPTLIGLHE 137
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ + I + L NSP+W VHP ++ + + I P SPNTDGI+P+SC N RI DC+
Sbjct: 138 CERVTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCH 197
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
I GDDC+A+K+G + + T+ + I T + + + +GSEMSGG+++V +
Sbjct: 198 IDVGDDCIALKAGTER--TPDRVATENVTITGCTMVRGHGGVV-IGSEMSGGVRNVVISN 254
Query: 381 IKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ G+R+KT RGG V+++ V + M
Sbjct: 255 CVFQGADRGIRLKTRRDRGGTVENVRVSTIVM 286
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 187/407 (45%), Gaps = 64/407 (15%)
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
+ AI +L+ S GG L + +G + +G L S+ LY+ ++A L + D + +
Sbjct: 24 LRSAIKKLT---SVGGGILKLTSGVFFSGPLQLYSNIHLYIEENATLTFNADFSLYK--- 77
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGK-------- 247
P + R LIF + ++ + G +G IDG G WW + K
Sbjct: 78 --PVWTRWEGVECWAMHPLIFASKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPK 134
Query: 248 -------------------------LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
L++ RP L++F+ NI + ++TL NSP WN H
Sbjct: 135 YPYELQLADLNKDYRNQPSGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFA 194
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
+ S+ + G+ I P +PNTDG+N DSC++ I++C GDDC+ +KSG E GI
Sbjct: 195 FCSDCTITGVHFINPKEAPNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRIN 254
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
PT+ ++I T + + + +GSE +GGI +++ + T+ G+RIKT GRGG +
Sbjct: 255 RPTENILIDSCTMKNGHGG-VVIGSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVI 313
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYG------SHADNHYDPKAL----PVIQGINYRDIVAD 452
++I + M + + YG S DP+ L P IQ I ++A+
Sbjct: 314 ENIRLEHCYMKNILCPLVVNCYYGPGGPKSSSPIFSLDPQPLSATTPKIQNIYISHLIAE 373
Query: 453 NV-SMAARLEGISGDPFTGICIANA----------TIGMAAKHKKVP 488
+ + AA + G+ P + I+ T +AA ++ +P
Sbjct: 374 HCRAAAAFIVGLPEQPIKNLYISECKFILDDINIQTTELAAMYRGLP 420
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ SI FG GDG T NTKA DAI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 56 YTVSILQFGAKGDGTTLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ + D N +P+ L + G + R S I N ++ +TG +G DG
Sbjct: 113 YTEKNALVVFTDDFNAYPI---LETSFEGLNTR--RCQSPISARNTENIAITG-HGVFDG 166
Query: 235 QGALW------------WQQFHK--------------GKLK------------------- 249
G W W K G LK
Sbjct: 167 SGDSWRPVKKSKLTASQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEE 226
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFV 346
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG++++ D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 347 -VGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q+ GG ++ +P G WLTG L+S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVN 103
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ +TG +GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFD 157
Query: 234 GQGALW------------WQQFHK----------------GKLK---------------- 249
G G W W++ K G LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 79/438 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S +I DFG DG T NTKA DAI Q++ + GG ++ +P G WLTG L+S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K++ +L S D + +P+I + G + R S I N ++ +TG +G DG
Sbjct: 116 YTEKNSLVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W++ +G LK
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + + + T NSPSW +HP+ NI + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC I + +GDD + +KSG DE G G P + +++ T + +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTM 415
+ +GSEMSGG+ ++ ++ + T+ G+R K+ GRGG V++IY+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 416 KWAFWMTGNYGSHADNHYDPKA----------LPVIQGINYRDIVADNVSMAARLEGISG 465
+ + G N + KA P+ + I +D+ + A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 466 DPFTGICIANATIGMAAK 483
I + N + A +
Sbjct: 469 MRIKNINMENIIVSNAKE 486
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 159/352 (45%), Gaps = 31/352 (8%)
Query: 151 GAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR 210
G L + AG W + L S T +L + A L A WP++ G + G
Sbjct: 122 GGTLQLAAGFWTSFPIRLKSSMTFHLAEGAVLRAPASRKGWPILPACDDAGHMLGSWEGL 181
Query: 211 ----YTSLIFGTNLTDVIVTGDNGTIDGQG--ALWWQQFHKGKLKYTRPYLMEFMYTDNI 264
+ + + ++I+ G G +DG G WW + + RP + + I
Sbjct: 182 PDACFAAPVHAIGTDNLIIEG-RGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRKI 240
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
Q+ T+ N+ SW +HP +++ G+TI AP SPNTDG NP+SC N I G
Sbjct: 241 QLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVG 300
Query: 325 DDCVAVKSGW-------DEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
DDC+AVK+G D G+ + ++ R + +GSEMSGG+ DV
Sbjct: 301 DDCIAVKAGKRSPDGEDDHLAETRGIRVRHCLMER------GHGGLVIGSEMSGGVHDVS 354
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--- 434
ED + T+ G+R+KT GRGG V +I +R + + ++ A +Y AD H +
Sbjct: 355 VEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDADGHDERVQ 414
Query: 435 -------PKALPVIQGINYRDIVADNVSMAARL-EGISGDPFTGICIANATI 478
K P I GI D+ N++ AA + G+ P + I N TI
Sbjct: 415 SRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI 466
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 162/343 (47%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q+ GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I + G + R S I N ++ +TG +GT D
Sbjct: 114 LYTKQNALVLFTGDFEAYPIIA---TSFEGLETR--RCQSPISARNAENIAITG-HGTFD 167
Query: 234 GQGALW------------WQQFHK----------------GKLK---------------- 249
G G W W++ K G LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 185/428 (43%), Gaps = 78/428 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
H+ +I+D+G VG+G NT+ F AI ++ GG + +P G W TG L S L
Sbjct: 19 HTVTISDYGAVGNGVYDNTRVFHQAIEACAKA---GGGTVVIPPGIWRTGPIKLQSRIEL 75
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ A ++ S+ ++P++ + +Y GR R S + G L DV +TG +G DG
Sbjct: 76 HASAGALVVFSKFFEDYPLL--MSTY-EGRQMF--RCQSPLDGEGLEDVAITG-SGIFDG 129
Query: 235 QGALWWQQFHKGKL---------------------------------------------- 248
G W + +GKL
Sbjct: 130 SGEAW-RPVKQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQ 188
Query: 249 ------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
Y RP L+ I +S T NS +W +HP S I +Q IT+ P + N
Sbjct: 189 DYVPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 248
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG++ DSC +E+ GDD + +KSG +E G G P++++ IR T +
Sbjct: 249 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVYHGHGG- 307
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH-----TMKW 417
I +GSEMSGGI+DV D I T+ G+R K+ GRGG V++I + + M + +
Sbjct: 308 IVVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISF 367
Query: 418 AFWMTGNYGSHADNHYDPKAL-------PVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
+ G GS Y + + PV + I +DIV A + G+ P
Sbjct: 368 NLYYEGKAGS---GEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVEN 424
Query: 471 ICIANATI 478
+ + + I
Sbjct: 425 LTVKRSAI 432
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 25/354 (7%)
Query: 125 VGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLA 184
+ DG T K+ + I+ + GG L VPAG++L +L S L L A LLA
Sbjct: 23 LADGTTDQAKSLQQTIDSCG---ATGGGTLIVPAGRYLISPISLCSRVNLQLASGATLLA 79
Query: 185 SQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH 244
S + ++ P +LI G +LTDV +TG GTIDG GA+WWQ+F
Sbjct: 80 STNAADYTPKLP----------------NLINGDSLTDVSLTG-TGTIDGNGAVWWQRFI 122
Query: 245 KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
RP L+ + N+ I LTL+NSPS+++ P N+ +Q +TI AP SPNTD
Sbjct: 123 DSGKTLNRPRLIYLTRSRNVTIDGLTLINSPSFHLVPSQCQNVTIQNLTITAPSDSPNTD 182
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIA 364
GI+P +CT+ I++C I +GDD +A+K G I P + + IR C + ++
Sbjct: 183 GIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQIV--QPCQDIQIRN--CRFLHGHGLS 238
Query: 365 LGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGN 424
+GSE S G+ V + T +G+RIK+ G GG ++++ +TM + +
Sbjct: 239 VGSETSSGVSSVSVTNCTFTGTTNGIRIKSQPGLGGAIQNLSYSQITMTNVTNPLIIDLA 298
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
Y + +N Y +P + G+ + A L G++ + ++N I
Sbjct: 299 YSLNNNNGY-ASDIPSVSGLTIDQLSVTGAKNAGSLVGLTNSLLQNLTLSNLQI 351
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 172/344 (50%), Gaps = 36/344 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DF V D + +T+A + AI+ S+ G + +PAG++LTG+ L S TL L
Sbjct: 5 NIIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLELA 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
KDA LL SQ L ++P I P+ G D + + + N + +GT DGQGA
Sbjct: 60 KDAMLLGSQRLEDYPDI---PTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTFDGQGA 113
Query: 238 LWWQQF-----HKGKL-KYTR-------------PYLMEFMYTDNIQISSLTLLNSPSWN 278
+WW +F + G L YTR P + ++ + + T +S WN
Sbjct: 114 VWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWN 173
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+H YS + +Q + ++ T P+TDGI+ DS R+E C + DD + VKSG
Sbjct: 174 LHVCYSKQVNLQRLRVMN-ATGPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRGAEA 232
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
G + ++IR T + + I LGSE SGGI++V E + T G RIK+A R
Sbjct: 233 QQLGRTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYG---SHADNHYDPKALP 439
GG++K+I VR + M + + F + N+ S+++ D K P
Sbjct: 291 GGWIKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQPP 334
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 197/410 (48%), Gaps = 61/410 (14%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ ++ D+G V DG NT+A +AI + + GG ++ +PAGK++TG +L+ +
Sbjct: 51 KNQEFNVMDYGAVADGSVLNTEAIAEAIKACN---AAGGGKVVLPAGKYVTGPIHLLDNV 107
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L + + A +L + D + +P+ ++ ++ LI+ + ++ +TG G +
Sbjct: 108 NLEIAEGAEVLFTTDKSLFPL-----AHTSYEGTELMNFSPLIYAKDKKNIAITGK-GVL 161
Query: 233 DGQG--ALWW----------------QQFHKGKLK-------------------YTRPYL 255
+GQ WW Q KLK + RP
Sbjct: 162 NGQANNGNWWPWCGNTKYGWAEGDPKQHSSLKKLKEDMSEKGVPVADRIFGMGEFLRPTF 221
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
+E +N+ I +T++N+P W VHP+ S+N++V GIT+ + PN DG +P+ N
Sbjct: 222 IEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITVDS--HGPNNDGCDPEYAKNVW 279
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
I++C +GDDC+A+KSG +E G +P++ +V+ I + + +GSE+S G+++
Sbjct: 280 IKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCKMIDGHGGVV-MGSEISAGVRN 338
Query: 376 VRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT----GNYGSHA 429
V ++ + + N + +RIKT RGG+V+++YVR + + +K A G YG
Sbjct: 339 VFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGIYGVQK 398
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARL-EGISGDPFTGICIANATI 478
+ +P + + +I DN L G P + + N TI
Sbjct: 399 GSF-----MPKVSNVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVTI 443
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 202/466 (43%), Gaps = 69/466 (14%)
Query: 78 KLVPLLIVVALL---SQRGAESRKARRLDSFEYNAISC----RAHSASITDFGGVGDGKT 130
KL L++ ALL S+ +K + FE I R ITDFG V K
Sbjct: 8 KLRLLVVAFALLAVGSRADVPVKKLKVPARFEMPEILVPDFSRVKRFLITDFGAVAGDKE 67
Query: 131 SNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNE 190
+ A + AI+ +Q GG ++ VPAG+WLTG +L S+ L+L K A LL S+ +
Sbjct: 68 KISGAIRQAIDAANQ---AGGGKVVVPAGEWLTGKVHLKSNVNLHLDKGAVLLFSEKPED 124
Query: 191 WPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGK-- 247
+ LP+ + Y+ LI+ +V +TG+ G + + +W + F + K
Sbjct: 125 Y-----LPAVHSSWEGIECYNYSPLIYAYQCKNVAITGE-GEVRAKMEVWKEWFARPKPH 178
Query: 248 -------------------------LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
+ RP ++F +N+ + T+ NSP W +HP
Sbjct: 179 MESIKRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQFNRCENVLMEGFTVTNSPFWTIHPY 238
Query: 283 YSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
N+++ + + A N DG++P+ N I DC GDD +A+KSG + G
Sbjct: 239 LCKNVVISRLKVYA--HGHNNDGVDPEMSQNVFITDCVFDQGDDAIAIKSGRNPEGWRLK 296
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR------IKTAV 396
P+K +VIR LT + + +A+GSE+SGGI++V DI G + IKT
Sbjct: 297 TPSKNIVIRNLTVKNGHQ-LVAIGSELSGGIENV---DISQCQVVDGAKLNHLLFIKTNE 352
Query: 397 GRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--------PKALPVIQGINYRD 448
GGYVK+IY +T + G G D Y + L I I +
Sbjct: 353 RMGGYVKNIYASNLTAGKID-----LGVLGIETDVLYQWRTLVPTKIRKLTPISDIYLSN 407
Query: 449 IVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
I +V +R+ G P + + N T G + K++ D
Sbjct: 408 ISVKDVKFESRILGQKELPVKNVSMKNITTGKVQEQKEIHENVLDF 453
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 163/351 (46%), Gaps = 63/351 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ SI +FG GDG NTKA DAI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 56 YTVSIVEFGAKGDGIMLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y +A +L + D +P+IK + G D R S I N ++ +TG +G DG
Sbjct: 113 YTEMNALILFTDDFEAYPIIK---TSFEGLDTR--RCQSPISAWNAENIAITG-HGVFDG 166
Query: 235 QGALW------------WQQFHK----------------GKLK----------------- 249
G W W K G LK
Sbjct: 167 SGDSWRPVKKGKLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATKDFNNPEGIETD 226
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 287 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 346
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ +GSEMSGG+++V D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 347 FV-VGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 79/438 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+S +I DFG DG T NTKA DAI Q++ + GG ++ +P G WLTG L+S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A +L S D + +P+I + G + R S I + ++ +TG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARDAENIAITG-HGVFDG 169
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W++ +G LK
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ F+ + + + T NSPSW +HP+ NI + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC I + +GDD + +KSG DE G G P + +++ T + +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-----HTM 415
+ +GSEMSGG+ ++ ++ + T+ G+R K+ GRGG V++IY+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 416 KWAFWMTGNYGSHADNHYDPKA----------LPVIQGINYRDIVADNVSMAARLEGISG 465
+ + G N + KA P+ + I +D+ + A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 466 DPFTGICIANATIGMAAK 483
I + N + A +
Sbjct: 469 MRIKNINMENIIVSNAKE 486
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 188/426 (44%), Gaps = 74/426 (17%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
SITD+ V G SNT A AI +LS+ GG + VP G WLTG L S+ L+
Sbjct: 15 QVSITDYKAVSGGIESNTAAINQAITELSKL---GGGTVNVPEGIWLTGPITLKSNINLH 71
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
L K A + ++ E+P+I L +Y G+ R R S I + ++ +TG+ G IDG
Sbjct: 72 LEKGALITFDKNPEEYPII--LTNYEGQPR----LRAVSPIHAFDEENIAITGE-GVIDG 124
Query: 235 QGALW------------WQQ----------------FHKGKLKYT--------------- 251
G W WQ ++ K Y
Sbjct: 125 NGHEWRPLKEFKVTKKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGCLEGEVSVEDPDAL 184
Query: 252 ----------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
RP + + + I I +TL NSP+WN+HP+ +N+ ++ I +
Sbjct: 185 KKAAPNYDLYRPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNANFAQ 244
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N DG++ +SC I GDD + +KSG + G +PT+ + IR +
Sbjct: 245 NGDGLDLESCRFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCVVYHGHGG 304
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM--------- 412
+ +GSEMS G++DV E+ + T++G+R K+A+GRGG V+DI +R + M
Sbjct: 305 FV-IGSEMSRGVRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDAII 363
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
TM + + + S + + +P + I RD+ A +++G+ P I
Sbjct: 364 FTMGYTLFRLDHQASDEPDTISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIHDII 423
Query: 473 IANATI 478
+ N I
Sbjct: 424 LENVMI 429
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 164/328 (50%), Gaps = 24/328 (7%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG GDG++ + A + AI + GA++ PAG + T L SH T+ L
Sbjct: 82 NIRDFGAKGDGESMDAAAIQAAIAAAPK-----GARIVFPAGTYRTTPIFLKSHITIELM 136
Query: 178 KDAFLLASQDLNEWPVI----------KPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
+ A LL + + +P++ + G A Y SL+ G + DV + G
Sbjct: 137 EGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEIAECYASLLTGIGVEDVRIIG 196
Query: 228 DNGTIDGQG--ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
+ GT+DG G WW K K + RP + + +I + +T+ NSPSW VHP+ SS
Sbjct: 197 E-GTLDGNGQNGDWWINC-KVKREAWRPRSLYLLECHDILVEGITIKNSPSWTVHPIRSS 254
Query: 286 NILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPT 345
+ +T+ P SPNTDGI+P+SC I GDDC+A+KSG + P+
Sbjct: 255 KLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIPLKERRPS 314
Query: 346 KQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYV 402
+ ++IR C+ Y + LGSEMSGG+++V E +T+ G+RIKT GRG +
Sbjct: 315 ENIIIR--NCLMQYGHGAVVLGSEMSGGVKNVFVERCFFEDTDRGLRIKTRRGRGNTAII 372
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHAD 430
IYV+ + M + F + Y D
Sbjct: 373 DQIYVKNIQMKGVLTPFTLNAFYFCDPD 400
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 202/455 (44%), Gaps = 70/455 (15%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKD 138
++PL I+ LS + L++ I R + ITD+ K S + K
Sbjct: 14 ILPLFIISQTLSD--PWKKAVEILENIHEPKIPERVFN--ITDYAD----KASLAENIKP 65
Query: 139 AINQ-LSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIK 195
A+++ + + GG ++ +P G + G + S+ L+L K+A +L S + ++ PV+
Sbjct: 66 ALDKAIEECGKSGGGKIIIPEGVYKCNGPIHFKSNINLHLEKNAVVLFSTNPKDYLPVV- 124
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA--LWWQQFHK-------- 245
+ R Y+ LI+G + +V +TG+ G DG + WW+ +
Sbjct: 125 ----FTRWEGVECYNYSPLIYGFEVDNVAITGE-GVFDGMASDENWWKWKGRKNPKDDET 179
Query: 246 -------------------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G+ Y RP ++F + NI I +T NSP W +H
Sbjct: 180 QNNPNSRPRLFEMNNQDVPVDKRVFGEGHYLRPNFVQFYKSKNILIEGVTFKNSPMWFLH 239
Query: 281 PVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 340
PV S NI+++ + I PN DG +P+SC N IE CY +GDDC+A+KSG + G
Sbjct: 240 PVLSENIIIRNVKTIG--HGPNNDGCDPESCKNVLIEGCYFDNGDDCIAIKSGRNNDGRR 297
Query: 341 YGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINTESGVRIKTAVGR 398
P++ ++IR T + + +GSE+SGG + V AE+ K + N + +RIK+ R
Sbjct: 298 INAPSENIIIRNCTMKDGHGGVV-IGSEISGGCRFVFAEECKMDSPNLDRMLRIKSNTVR 356
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL------PVIQGINYRDIVAD 452
GG V+ +YVR + + + A + YDPK + P + I ++ +
Sbjct: 357 GGVVEHVYVRNIEVGEVSNAIVRMNMF-------YDPKEIGPRDFPPKFRNIRVENVTSR 409
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKV 487
A G+ P + I N K +
Sbjct: 410 KSDYALEFLGLEESPIENVEIINCDFNGVKKENSI 444
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 204/454 (44%), Gaps = 85/454 (18%)
Query: 82 LLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAIN 141
L V+ L+ GA A++L + + + + SIT FG + G+ NT++ AI+
Sbjct: 5 LKTVILLIFTHGA---FAQKLAEPTVSLPTFKKDTVSITAFGAISGGRHLNTESINQAID 61
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP----L 197
Q + GG + +PAG WL+G L S+ L+L +A L ++D +++ +++ +
Sbjct: 62 QTHK---KGGGVVLIPAGVWLSGPITLKSNINLHLAANALLQFTKDFSQYSLVQTSWEGI 118
Query: 198 PSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------------WQ---- 241
P R S I+ N ++ +TG G IDG G W W+
Sbjct: 119 PQM---------RNQSPIWALNQQNIAITG-KGVIDGNGDAWRMVKKAKMTETQWKKLIS 168
Query: 242 ------------------------------------QFHKGKLKYTRPYLMEFMYTDNIQ 265
QF++ Y RP ++ + I
Sbjct: 169 SGGVLNEKGDIWYPSQSSLKGASYKDPGLVEKGKNAQFYEEIKDYLRPNMILLEKCERIL 228
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ +T NS +WN+HP+ S+++ ++ I + P S N DG++ +SC N +E GD
Sbjct: 229 LEGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYSQNGDGLDIESCKNVLVEQSTFDVGD 288
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
D + +KSG +E G GMPT+ L +R T + + +GSEMSGG +++ ++ I
Sbjct: 289 DAICIKSGRNEAGRERGMPTENLWVRNCTVYHAHGGFV-VGSEMSGGAKNLYVDNCTFIG 347
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD------NHYDP---K 436
T+ G+R KT GRGG V+++Y+ + M + + Y D H +P +
Sbjct: 348 TDIGLRFKTTRGRGGVVENVYINNIFMKDIPGEAILFDMYYEAKDPIVLSGEHREPPKVE 407
Query: 437 ALPVIQGI-NYRDIVADNVSM--AARLEGISGDP 467
LPV + ++D +NV AA+ I G P
Sbjct: 408 FLPVTEATPQFKDFYINNVVCDGAAKALFIRGLP 441
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 187/407 (45%), Gaps = 66/407 (16%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ + +I +G V DG T NTK+ +AI+ S+ +GG + +P G W+TG L S+
Sbjct: 40 KKDTFNIIKYGAVADGITLNTKSINNAIDACSK---NGGGVVLIPQGLWMTGPIVLKSNV 96
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L++ + A + + D +++P+++ G AA R S + GTNL ++ +TG G I
Sbjct: 97 NLHIDRAAMVQMTDDKSQYPLVE-----GNYEGHAAVRNQSPVSGTNLVNIAITG-GGII 150
Query: 233 DGQGALWW---------------------------------QQFHKGK-------LK--- 249
DG G W Q + KG LK
Sbjct: 151 DGNGTGVWRAIGKDRLTESEWKELVASGGVVSENGKSWYPSQSYAKGNAIKDVSLLKPGK 210
Query: 250 ----------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVT 299
Y RP ++ I +S T NSP+W +H + ++ +Q + + P
Sbjct: 211 SLSDYEEYKDYFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWN 270
Query: 300 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPY 359
+ N D I+ +SC N +E+ +GDD + +KSG DE G G+PT+ +V+R +
Sbjct: 271 AQNGDAIDVESCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAH 330
Query: 360 SATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH-TMKWA 418
+ +GSEMSGG +++ D I T+ G+R KTA GRGG V++IY++ ++M + A
Sbjct: 331 GGFV-IGSEMSGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDILHEA 389
Query: 419 FWMTGNYGSHADNHYDPKALPVIQGI--NYRDIVADNVSMAARLEGI 463
Y S A + K P + +R+ NV+ GI
Sbjct: 390 ILFDMYYMSKAGSTLGLKTFPPVTEATPQFRNFYVSNVACNGAETGI 436
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 163/352 (46%), Gaps = 65/352 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ +I DFG GDG NTKA DAI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 56 YTVNIVDFGAKGDGIVLNTKAINDAIKAVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG------- 227
Y +A +L + D +P+IK + G D R S I N ++ +TG
Sbjct: 113 YTEMNALVLFTDDFEAYPIIK---TSFEGLDTR--RCQSPISAWNAENIAITGHGVFDGS 167
Query: 228 ----------------------DNGTIDGQGALWWQQFHKGKLK---------------- 249
G +D G++W+ G LK
Sbjct: 168 GDSWRPVKKGKLTAGQWSSLVSSGGVVDASGSIWYPT--AGALKGAMATKDFNNPEGINT 225
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S
Sbjct: 226 DEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYS 285
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 286 QNGDALDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 345
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ +GSEMSGG+++V D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 346 GFV-VGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 172/344 (50%), Gaps = 36/344 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DF V D + +T+A + AI+ S+ G + +PAG++LTG+ L S TL L
Sbjct: 5 NIIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLELA 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
KDA LL SQ L ++P I P+ G D + + + N + +GT DGQGA
Sbjct: 60 KDAMLLGSQRLEDYPDI---PTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTFDGQGA 113
Query: 238 LWWQQF-----HKGKL-KYTR-------------PYLMEFMYTDNIQISSLTLLNSPSWN 278
+WW +F + G L YTR P + ++ + + T +S WN
Sbjct: 114 VWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWN 173
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+H YS + +Q + ++ T P+TDGI+ D+ R+E C + DD + VKSG
Sbjct: 174 LHVCYSKQVNLQRLRVMN-ATGPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRGAEA 232
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
G + ++IR T + + I LGSE SGGI++V E + T G RIK+A R
Sbjct: 233 QQLGRTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYG---SHADNHYDPKALP 439
GG++K+I VR + M + + F + N+ S+++ D K P
Sbjct: 291 GGWIKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQPP 334
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 188/378 (49%), Gaps = 61/378 (16%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI ++G G+ +T A AI ++ GG ++ VP G +LTG+ +L+S+ L+L
Sbjct: 60 SIEEYGAEAGGEVLSTDAIAAAIKACNEA---GGGRVVVPKGVYLTGAVHLLSNVNLHLE 116
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S++ ++ P+++ R Y+ I+ ++ +TG NGT+DG
Sbjct: 117 EGATLRFSRNPKDYLPLVR-----SRWEGMELMNYSPFIYAYQQENIAITG-NGTLDGHA 170
Query: 237 AL--WW---------------------QQFHK-------------GKLKYTRPYLMEFMY 260
+ WW + H+ G+ + RP ++
Sbjct: 171 DMEHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMRPQFVQPFE 230
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
N+ I + L+N+P WN+HPV N+ V+ + I PN DG +P++C N I+DCY
Sbjct: 231 CKNVLIQDVKLINAPMWNLHPVLCENVTVERVKI--ETLGPNNDGCDPEACKNVLIKDCY 288
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG +E G G+P++ ++I + + +GSE+SGG ++V A++
Sbjct: 289 FDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKEGHGGVV-IGSEISGGARNVFAQN 347
Query: 381 I--KAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ + N + +RIKT+ RGG V++IY+R + + T + A + +H +
Sbjct: 348 LVMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYREAAVRFNMFYEEEGDH-----I 402
Query: 439 PVIQGINYRDIVADNVSM 456
P I R+++ +N+ +
Sbjct: 403 PTI-----RNVIVENLQV 415
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 179/366 (48%), Gaps = 36/366 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDGK +T + + AI S G +++ G +LT L S+ TL L
Sbjct: 85 NVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFHEGIYLTYPLFLKSNITLELG 139
Query: 178 KDAFLLASQDLNEWPVI-------KPLPSY-GRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
K A LL +++ +P++ K SY G A + SLI G + +V + G+
Sbjct: 140 KGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGE- 198
Query: 230 GTIDGQGAL--WWQQFHKGKLKYT--RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
GTIDG + WW H K+K RP + N+ I +T+ NSPSW +HP+ S
Sbjct: 199 GTIDGNSSFDTWW---HDAKVKRIAWRPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQ 255
Query: 286 NILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPT 345
N+ + I P +PNTDG++P+SC + I GDDC+A+KSG + +
Sbjct: 256 NLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSS 315
Query: 346 KQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYV 402
+ L IR C+ Y + +GSEMSGG+++V + T+ G+RIKT GRG G +
Sbjct: 316 ENLYIR--NCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGII 373
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDIVAD 452
+I+ + M + F + Y AD + + LPV I I +DI +
Sbjct: 374 DEIHASNIKMDKVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCN 433
Query: 453 NVSMAA 458
+ +AA
Sbjct: 434 DTQVAA 439
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 195/450 (43%), Gaps = 82/450 (18%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTS-NTKAFKDAINQLSQYSSDGGA 152
AE R R S E I+ R S IT FG + N KA AI L++ GG
Sbjct: 25 AEYRAIER--SIESPKIANR--SVVITKFGAKTSASAAQNQKAILRAIAVLAK---QGGG 77
Query: 153 QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT 212
++ VPAGKW TG+ L S L + KDA L D + +P++K Y+
Sbjct: 78 KVIVPAGKWNTGALRLQSGIELVVSKDAHLQFVFDRDLYPLVKT-----SWEGMMCWNYS 132
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGA--LWWQQFHKGKLKYT------------------- 251
I+ DV+V+G+ GTIDG G+ WW K Y
Sbjct: 133 PCIYSYEANDVVVSGE-GTIDGGGSNETWWPMNGKANFGYVKGVTKEAQVLGSRARLQKM 191
Query: 252 ------------------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
RP L+ F+ + I+IS +TLL SP W +HP+ N+ V G+
Sbjct: 192 AEADMPWDERRFGKGYGLRPQLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVK 251
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I PN DG +P+ C N I++ +GDDC+A+KSG + G + P+K ++IR
Sbjct: 252 IWN--EGPNGDGCDPEGCENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNC 309
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG--VRIKTAVGRGGYVKDIYVRGMT 411
+ + +GSE+SGG Q++ AED + + E +RIKT RGG +++I +R +
Sbjct: 310 VMEDGHGGVV-IGSEISGGCQNIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVK 368
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKA------LPVIQGINYRDIVADNVSMAARLEG--- 462
+ K A + Y+PK PV++ +N D+ + + G
Sbjct: 369 VGQCKEAV-------VKINLDYEPKEPCYRGFEPVVRNVNVEDVTCQKSAYGVLIVGRDS 421
Query: 463 --------ISGDPFTGICIANATIGMAAKH 484
+ F GI N I +H
Sbjct: 422 VENVTDIRLKNCSFNGISKENVKITGKTRH 451
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 210/424 (49%), Gaps = 58/424 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLYLH 177
ITDFG G+ A AI++ S+ +GG ++ +PAG+W + G L SH L+L
Sbjct: 44 ITDFGAEAGGEADCRPAVAAAIDRCSR---EGGGRVVIPAGRWFSKGPVVLKSHVNLHLE 100
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L S D ++ LP+ R Y+ LI+ T++ VTG G IDG+G
Sbjct: 101 AGAVLFFSSDEADY-----LPAVLTRWEGTEVYNYSPLIYAWQATNIAVTG-QGVIDGRG 154
Query: 237 A---LWWQQFHK---------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
+ W+ K G+ Y RP ++E + ++ I +T +
Sbjct: 155 SHNFAHWKPRQKADQKALRRMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTFV 214
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP W +HP+ N+ V+G+T+ + + N DG +P+SCTN IEDC +GDD +A+KS
Sbjct: 215 DSPFWVIHPLACENVTVRGVTVDS--YNLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKS 272
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D G PT+ ++IR + S + + +GSE+SGG+++V E+++ + +G+
Sbjct: 273 GRDNDAWRIGRPTENVLIRNCSFRSKANG-VCIGSEISGGVRNVVVENVRMSDVGNGIYF 331
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFWM-TGNYGSHA-DNH---------------YDP 435
K+ + RGGY++D++V G+ +++ + +Y S + +NH +
Sbjct: 332 KSNLDRGGYIEDVFVCGVEADSVRKTLVLFEPDYKSESRENHPTAFRGFVIEDVRAQWAG 391
Query: 436 KALPVIQG---INYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCA 492
KA I+G + RD+ +++A+ E + GI ++ TI + ++ P C
Sbjct: 392 KAGIDIRGFADMPVRDVTISRLTLASTPEPVIVRNAAGIILSEVTINGERQDRRDPDACI 451
Query: 493 DIGG 496
+ G
Sbjct: 452 SLNG 455
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 162/351 (46%), Gaps = 63/351 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ +I DFG GDG NTKA DAI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 56 YTVNIIDFGAKGDGIVLNTKAINDAIKAVN---AKGGGKVVIPGGLWLTGPIELLSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y +A +L + D +P+I+ + G + R S I N ++ +TG NG DG
Sbjct: 113 YTEMNALILFTDDFEAYPIIE---TSFEGLNTR--RCQSPISAWNAENIAITG-NGVFDG 166
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W G LK
Sbjct: 167 SGDSWRPVKKGKLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATKDFNNPEGIETD 226
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 287 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGG 346
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ +GSEMSGG+++V D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 347 FV-VGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 189/425 (44%), Gaps = 66/425 (15%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ I DFG DG+T NT+A +AI +S+ GG ++ +P G WLTG L ++ L
Sbjct: 56 YQVDIRDFGAKADGETLNTEAINNAIKAVSE---KGGGKVVIPEGLWLTGPVVLQNNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K+A +L S D + +P+++ + G D R S I N ++ +TG +G +DG
Sbjct: 113 HVEKNALVLFSGDADLYPLVR---TSFEGLDML--RCQSPISAMNAENIAITG-HGVLDG 166
Query: 235 QGALW------------WQQFHK------------------------------------- 245
G W W+ K
Sbjct: 167 SGDSWRPVKRNKMTDGQWKSLLKSGGVVDESGKVWYPNEGALKASILTGSKEKREISDSE 226
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
G ++ RP L+ + + + + +T NSPSW +HP+ ++ + G+ + P S N
Sbjct: 227 WEGMKRWLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNG 286
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
D ++ +SC N + + +GDD + +KSG + G G P + ++++ T + + +
Sbjct: 287 DALDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLHGHGGFV 346
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
+GSEMSGG+++V D I T+ G+R K+ GRGG V+++YV + M + +
Sbjct: 347 -VGSEMSGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINMINIPGDALIAD 405
Query: 424 NYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
Y + D P + P + I+ +I A L G+ P + N I
Sbjct: 406 LYYAVKDAPGAPVPAVTEETPSFKNIHISNISCKGAGRAMFLNGLPEMPIENFSVRNMRI 465
Query: 479 GMAAK 483
A K
Sbjct: 466 TDAQK 470
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 61/402 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITD+G D +T+A + AI ++GG ++ VP G +L+G +L S+ L+L
Sbjct: 57 ITDYGASLDSTVKSTEAIRKAIEACH---TNGGGRVIVPKGTFLSGPIHLKSNVNLHLED 113
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG-- 236
A +L S+D+N++ KPL + R Y+ LI+ ++ +TG NG +DG
Sbjct: 114 GAKILFSRDVNDY---KPL-VFSRWEGMECMNYSPLIYAYEQENIAITG-NGILDGNANN 168
Query: 237 ALWW-----------------------------------QQFHKGKLKYTRPYLMEFMYT 261
WW ++ H G Y RP ++ +
Sbjct: 169 EYWWPWKAKKEYGWKEGIPNQLAAVKILTQQVKDLVPARERIH-GDGSYLRPPFIQPYLS 227
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
N+ I+ + ++N+P WN++PV N+ V+ + ++ PN DG +P+SC N I CY
Sbjct: 228 KNVLIADVKIINAPFWNINPVLCENVTVRNVKVVT--HGPNNDGCDPESCKNVLITGCYF 285
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDI 381
+GDDC+A+KSG +E G P + +I + + +GSE+SGG +++ A+++
Sbjct: 286 DTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKDGHGGVV-IGSEISGGARNIFAQNL 344
Query: 382 --KAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA-- 437
+ N + +R+KT+ RGG ++++Y+R + + T K A + D Y+
Sbjct: 345 IMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAIL-------CDMFYEKPGDF 397
Query: 438 LPVIQGINYRDI-VADNVSMAARLEGISGDPFTGICIANATI 478
LP I+ I+ ++ + + P + I+N+TI
Sbjct: 398 LPTIRNISVENLNIKQGGKFGVLINAYKESPVENLRISNSTI 439
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 157/343 (45%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q+ GG ++ +P G WLTG L+S+
Sbjct: 56 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVN 112
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ +TG GT D
Sbjct: 113 LYTERNALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFD 166
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 167 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINT 226
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + I + +T NSPSW +HP+ + V I +I P S
Sbjct: 227 DEEWNEIRPWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 286
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 287 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 158/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q GG ++ +P G WLTG L+S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVN 103
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ +TG +GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFD 157
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 56/405 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T+FG GDG+T T AF+ AI++ + GG ++ VP G +LTG+ +L S+ L++ +
Sbjct: 57 LTEFGAKGDGRTDCTLAFRRAIDRCTNA---GGGRVVVPPGSYLTGAIHLKSNVDLHISE 113
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ-- 235
+ SQ+ ++ PV+ + R Y+ I+ T++ +TG GT++GQ
Sbjct: 114 GTTVKFSQNPKDYLPVV-----FSRWEGVEVFNYSPFIYAFEQTNIAITG-KGTLNGQSD 167
Query: 236 GALWW----------------------------------QQFHKGKLKYTRPYLMEFMYT 261
WW Q+ G+ Y RP ++
Sbjct: 168 NEHWWPWNGRAAYGWKEGMSNQRPDRNALFAMAEKGVPVQERIFGEGHYLRPQFIQPYRC 227
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+N+ I +T+ NSP W +HPV N++VQ + I + PN DG NP+SCT+ I+DC
Sbjct: 228 ENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVIINS--HGPNNDGCNPESCTDVLIKDCDF 285
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDI 381
+GDDC+A+KSG + G PT+ +++ + I +GSE+SGG++++ A +
Sbjct: 286 DTGDDCIAIKSGRNADGRRLKAPTENIIVTGCRMKDGHGG-ITVGSEISGGVRNLFASNC 344
Query: 382 K--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-FWMTGNYGSHADNHYDPKAL 438
+ + N + +R+K RGG +++++ R + + + A + NY A +
Sbjct: 345 RLDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQVAHAVITIDFNYEEGAKGSF----T 400
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
PV++ + + A ++G++ P + + N A+
Sbjct: 401 PVVRDYTVDGLRSTKSKYALDVQGLATAPIVNLRLTNCIFDNVAE 445
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 181/415 (43%), Gaps = 66/415 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ ++G G +T A +AI Q S+ +Y+P G +L+ + L S+ L +
Sbjct: 12 NVVEYGADPKGLDDSTGAINEAITQASETR----GIVYIPPGNYLSRNIILRSNVMLLID 67
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K A + S D +P+I+ R LIFG ++ +V + G+ G DGQG
Sbjct: 68 KGAVVKFSTDYKSYPIIET-----RREGVHHCGVMPLIFGKDVRNVRIIGE-GVFDGQGY 121
Query: 238 LWW---------------------------------------QQFHK-----GK------ 247
WW + F K GK
Sbjct: 122 AWWPIRRFRVTEDYWRRLVESGGVVGDDGKTWWPTRNAMEGAEAFRKITSEGGKPSTEDC 181
Query: 248 ---LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
++ RP L++ +N+ I +T +SP W +H +YS ++ + + IAP SPNTD
Sbjct: 182 ERYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSPNTD 241
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATI 363
G+ DS ++ + C I GDDC+ +KSG DE G G+P++ I C+
Sbjct: 242 GVVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSEN--IHASGCLMKRGHGGF 299
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
+GSEMSGG+++V +D TE GVRIKT GRGG ++++YV + M + +
Sbjct: 300 VIGSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIHEAVVVD 359
Query: 424 NYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ + P I+G+ R+ D A + G+ P I I N I
Sbjct: 360 MFYEKRPVEPVSERTPKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTRI 414
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 163/349 (46%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ +I FG GDG T NTKA DAI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 56 YTVNILQFGAKGDGITLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ S D N +P+ L + G + R S I N ++ +TG G DG
Sbjct: 113 YTEKNALIVFSDDFNAYPI---LETSFEGLNTR--RCQSPISARNAENIAITG-YGVFDG 166
Query: 235 QGALW------------WQQFHK--------------GKLK------------------- 249
G W W K G LK
Sbjct: 167 SGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEE 226
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
D ++ +SC N I + +GDD + +KSG D+ G G P + ++++ T + + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFV 346
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG++++ D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 347 -VGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 163/349 (46%), Gaps = 61/349 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ +I FG GDG T NTKA DAI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 56 YTVNILQFGAKGDGITLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y K+A ++ S D N +P+ L + G + R S I N ++ +TG G DG
Sbjct: 113 YTEKNALIVFSDDFNAYPI---LETSFEGLNTR--RCQSPISARNAENIAITG-YGVFDG 166
Query: 235 QGALW------------WQQFHK--------------GKLK------------------- 249
G W W K G LK
Sbjct: 167 SGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEE 226
Query: 250 ------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
D ++ +SC N I + +GDD + +KSG D+ G G P + ++++ T + + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFV 346
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG++++ D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 347 -VGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 166/355 (46%), Gaps = 62/355 (17%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ + +I F GDG T NT + DAI S+ + VP G WLTG +L S+
Sbjct: 36 KTDTFNIKQFDAKGDGLTLNTNSINDAITSCSEKGG---GVVLVPGGVWLTGPIDLKSNV 92
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L++ +D LL ++D N++P+++ G AGR S I G +L ++ +TG G I
Sbjct: 93 NLHIDRDGILLFTKDFNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAITG-TGII 146
Query: 233 DGQGALW------------WQ-QFHKGKL------------------------------- 248
DG G W WQ + G L
Sbjct: 147 DGNGDAWRMVKKDKLTATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGILKEGRS 206
Query: 249 --------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP ++ I + +T NSP+WN+HP S++ ++G+ + P +
Sbjct: 207 IQDFEVYKDFLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYA 266
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N DGI+ +S TNT IE+ GDD + +KSG DE G G PT+ +++R +
Sbjct: 267 QNGDGIDLESSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVVYHAHG 326
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ +GSEMSGG +++ + + T+ G+R KT GRGG V++IYV + M +
Sbjct: 327 GFV-IGSEMSGGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDI 380
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 194/419 (46%), Gaps = 38/419 (9%)
Query: 109 AISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
+I + SA +I DFG VGDG NT + AI + ++ +P G +LTG
Sbjct: 74 SIKTKLESAVVNILDFGAVGDGNHVNTAFIQAAIQVCPAF-----GRVIIPKGTYLTGPL 128
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-------YGRGRDAAAGRYTSLIFGTN 219
L S+ TL L + + LL ++ +P++K S G A + SLI N
Sbjct: 129 FLKSNITLELEEGSVLLGLKEREHYPILKANISMTNRDFYLGSWEGNEADCFASLITAIN 188
Query: 220 LTDVIVTGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSW 277
+ +V + G GTIDG WW + + ++ + RP + NI + +T+ NSPSW
Sbjct: 189 VENVNIIG-KGTIDGNSDFDTWWFKAKEKRIAW-RPRTLFLNACKNILVEGVTIKNSPSW 246
Query: 278 NVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
+HP+ S ++ ++I P +PNTD ++P+SC N I GDDC+A+KSG +
Sbjct: 247 TIHPLMSDHLKFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSGKIDI 306
Query: 338 GIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
+ ++ + IR S + A + LGSEMS G++ + E T+ G+RIKT G
Sbjct: 307 SKKNPVSSENINIRNCNMRSGHGA-VVLGSEMSSGLKSIFIEKCIFNATDRGLRIKTRRG 365
Query: 398 RG--GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGIN 445
RG G + +I+++ + M + F + Y D + + LPV I I
Sbjct: 366 RGSKGIIDNIHMKNIKMDKVLTPFSINSFYFCDDDGKTEYVWSKEKLPVDDKTPYIGSIY 425
Query: 446 YRDIVADNVSM-AARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTP 503
D+ N + AA + G+ + + N ++ K+ D M S + P
Sbjct: 426 VEDVTCTNAHVCAAFMYGLPEQKIEKVSMKNVSVSFDENAKE------DYADMMSFLEP 478
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 201/445 (45%), Gaps = 42/445 (9%)
Query: 39 RSGSAKAIVGNTTKQHSKITYLITTMELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRK 98
RS + G + T L+ E + ++ + + L P G E
Sbjct: 11 RSAVVEFDDGGKYYSKEEYTLLVNGEEYGKTEKVVTTIYGLKPDTEYKISALYAGKEYGP 70
Query: 99 ARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPA 158
+EY ++ R +FG GDG+ +T A + AI ++ +++ VP
Sbjct: 71 VEFKTDYEYVTLNVR-------EFGAYGDGEHDDTNAIQCAI-----MAAPKDSRVLVPE 118
Query: 159 GKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVI---------KPLPSYGRGRDAAAG 209
G + S L + L L K A L A + ++P++ K + G
Sbjct: 119 GVYKISSIFLKDNLNLELAKGAVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEGNPLD 178
Query: 210 RYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHKGKLKYT--RPYLMEFMYTDNIQ 265
+++++ G N ++V +TG+ GTIDG WW+ K++ T RP L N+
Sbjct: 179 MFSAIVCGINCSNVTITGE-GTIDGCTTHDNWWKNC---KIRNTAWRPRLFFINNCSNVT 234
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ +T+ NSPSW +HP +S ++ + I+ P S NTDG++P+SC + + YI GD
Sbjct: 235 MHGITVQNSPSWTIHPYFSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGD 294
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
DC+A+KSG PT+ + +R+ C+ + +GSE++ G++DV D +N
Sbjct: 295 DCIAIKSGKIYMAQKEKTPTEDMTVRQ-CCMRDGHGAVTVGSEIAAGVKDVHIRDCMFMN 353
Query: 386 TESGVRIKTAVGRG--GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALP 439
T+ G+R+KT GRG + DI + M + F + Y D + K LP
Sbjct: 354 TDRGLRVKTRRGRGKLSVLDDISFENIDMDNVMTPFVVNSFYFCDPDGKTEYVGSRKPLP 413
Query: 440 V------IQGINYRDIVADNVSMAA 458
V I+ + ++DI A N +A
Sbjct: 414 VDDRTPSIKSLTFKDINAKNCHVAG 438
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 204/440 (46%), Gaps = 59/440 (13%)
Query: 72 LRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAI---SCRAHSASITDFGGVGDG 128
+R + L+ LL V + S + KA + + I S + ITDFG D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 129 KTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
+ + +AINQ + Q S GG + VP G + TG L S+ +L + A L S D
Sbjct: 62 EAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 188 LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHK 245
+ + + + G D LI+ +++ +TG G IDGQG++ WW
Sbjct: 119 QSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGSMETWWPMC-- 171
Query: 246 GKLKY-------------------------------------TRPYLMEFMYTDNIQISS 268
G +KY RP L+ I I
Sbjct: 172 GAVKYGWKEGMVAQRNGGRERLLMYGETLTPVYKRLMKPEDGMRPQLLNLHSCHTILIEG 231
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+C +GDDC+
Sbjct: 232 VTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCI 289
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINT 386
A+KSG +E G + +P++ +++R + + + +GSE+SGG +++ ED + + N
Sbjct: 290 AIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEISGGYRNLFVEDCRMDSPNL 348
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
+ +RIKT+ RGG ++++YVR +T+ + A + N P+++ ++
Sbjct: 349 DRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFDPIVRNVHL 407
Query: 447 RDIVADNVSMAARLEGISGD 466
+++ + + + G+ D
Sbjct: 408 KNVTCEKSKLGVLIIGLEDD 427
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 204/440 (46%), Gaps = 59/440 (13%)
Query: 72 LRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAI---SCRAHSASITDFGGVGDG 128
+R + L+ LL V + S + KA + + I S + ITDFG D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 129 KTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
+ + +AINQ + Q S GG + VP G + TG L S+ +L + A L S D
Sbjct: 62 EAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 188 LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHK 245
+ + + + G D LI+ +++ +TG G IDGQG++ WW
Sbjct: 119 QSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGSMETWWPMC-- 171
Query: 246 GKLKY-------------------------------------TRPYLMEFMYTDNIQISS 268
G +KY RP L+ I I
Sbjct: 172 GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMRPEDGMRPQLLNLHSCHTILIEG 231
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+C +GDDC+
Sbjct: 232 VTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCI 289
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINT 386
A+KSG +E G + +P++ +++R + + + +GSE+SGG +++ ED + + N
Sbjct: 290 AIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGG-VVIGSEISGGYRNLFVEDCRMDSPNL 348
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
+ +RIKT+ RGG ++++YVR +T+ + A + N P+++ ++
Sbjct: 349 DRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFDPIVRNVHL 407
Query: 447 RDIVADNVSMAARLEGISGD 466
+++ + + + G+ D
Sbjct: 408 KNVTCEKSKLGVLIIGLEDD 427
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 165/327 (50%), Gaps = 33/327 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DF V D + +T+A + AI+ S+ G + +PAG++LTG+ L S TL L
Sbjct: 5 NIIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLELA 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
KDA LL SQ L ++P I P+ G D + + + N + +GT+DGQGA
Sbjct: 60 KDAVLLGSQRLEDYPDI---PTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTLDGQGA 113
Query: 238 LWWQQF-----HKGKL-KYTR-------------PYLMEFMYTDNIQISSLTLLNSPSWN 278
+WW +F G L YTR P + ++ + + T +S WN
Sbjct: 114 VWWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWN 173
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+H YS + +Q + ++ T P+TDGI+ DS R+E C + DD + VKSG
Sbjct: 174 LHVCYSKQVNLQRLRVMN-ATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEA 232
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
G + ++IR T + + I LGSE SGGI++V E + T G RIK+A R
Sbjct: 233 QQLGRTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GG++K+I VR + M + + F + N+
Sbjct: 291 GGWIKNIVVRHLKMEDVCYPFMLQLNW 317
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 36/374 (9%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A + ++ +G GDG T +T A + AI+ + GG + + K++T L S
Sbjct: 23 AKTCNVRAYGARGDGATKDTVAIQKAIDACA---GKGGTVVIGGSSKFITAPLTLKSKMI 79
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
+ L AS D N++P + +GR +++ D+ +TG G ID
Sbjct: 80 FRVEAGTTLEASTDHNDFPEKEEFKDHGR---------QAMLTAKAAEDITITG-GGVID 129
Query: 234 GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
G+G WW Q RP L+ F + +I++ ++T NS W + P YS +++ + +
Sbjct: 130 GRGESWWPQ-----PNLPRPRLIVFDHCKHIRMENITAQNSAMWQIVPYYSDDLVFRNMK 184
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
++AP TS NTDGI+P + T I+ YI +GDD VA+KSG G P L R +
Sbjct: 185 VLAPQTSHNTDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDLPSRDI 238
Query: 354 T---CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
T C + +++GSE++GG+Q+VRAE I T+ G+R+K+ RG + + R +
Sbjct: 239 TITDCEFLHGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDI 298
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGI-NYRDIVADNVSM-----AARLEGIS 464
TM +K A ++ Y D + PV + ++ DI +NV AA + G+
Sbjct: 299 TMENVKTAILLSEFYPKIPDTITEE---PVTRLTPHFHDITIENVQAVGSRDAAVIVGLP 355
Query: 465 GDPFTGICIANATI 478
P + + N I
Sbjct: 356 ESPIRNLKLTNVHI 369
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 204/440 (46%), Gaps = 59/440 (13%)
Query: 72 LRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAI---SCRAHSASITDFGGVGDG 128
+R + L+ LL V + S + KA + + I S + ITDFG D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 129 KTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
+ + +AINQ + Q S GG + VP G + TG L S+ +L + A L S D
Sbjct: 62 EAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 188 LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHK 245
+ + + + G D LI+ +++ +TG G IDGQG++ WW
Sbjct: 119 QSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGSMETWWPMC-- 171
Query: 246 GKLKY-------------------------------------TRPYLMEFMYTDNIQISS 268
G +KY RP L+ I I
Sbjct: 172 GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEG 231
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+C +GDDC+
Sbjct: 232 VTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCI 289
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINT 386
A+KSG +E G + +P++ +++R + + + +GSE+SGG +++ ED + + N
Sbjct: 290 AIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEISGGYRNLFVEDCRMDSPNL 348
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
+ +RIKT+ RGG ++++YVR +T+ + A + N P+++ ++
Sbjct: 349 DRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRGFDPIVRNVHL 407
Query: 447 RDIVADNVSMAARLEGISGD 466
+++ + + + G+ D
Sbjct: 408 KNVTCEKSKLGVLIIGLEDD 427
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 182/372 (48%), Gaps = 37/372 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG VGDGKT +T A + +++ S GG +++VPAG++LTG+ L S+ L L
Sbjct: 58 NVRDFGAVGDGKTKDTLALQQTLDRCSLL---GGGEVFVPAGEYLTGALVLRSNTLLRLD 114
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
DA LL S D+ ++P+ + R Y I + ++ + G G I G A
Sbjct: 115 GDASLLGSPDVADYPLTQV-----RWEGRWIKGYIGFISAMDAENIGIVG-KGKIVGNTA 168
Query: 238 LWWQQFHKGKL----KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
+ KG++ ++ P L+EF+ N+++ + W++HP Y NI + +T
Sbjct: 169 I------KGRVERATQFRNPALLEFVSCRNVRVEDCFTSQNDMWSIHPTYCENITFKNVT 222
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
+ DGI+ DSC + I+ C + DDC+++KSG E G PT+ + I
Sbjct: 223 V-----HSGADGIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNC 277
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTES-GVRIKTAVGRGGYVKDIYVRGMTM 412
T + + A I +GSE SGGI++VR K + + + IK+ GRG +++DI + + +
Sbjct: 278 TFMDHFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMNDLEV 337
Query: 413 HTMKWAFWMTGNYGSHADNHY---DPKALPVIQGINYRDI-------VADNVSM--AARL 460
K F S + + + +P I+ ++ +I + D V + + L
Sbjct: 338 SGAKQGFLRFNILDSGKQDEFPVPGEEGIPTIRNFHFSNIRVTDMPVLVDGVGIHPSKPL 397
Query: 461 EGISGDPFTGIC 472
EG S TG C
Sbjct: 398 EGFSLTNVTGTC 409
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 160/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLYLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I + G + R S I N ++ +TG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIIA---TSFEGLETR--RCQSPISARNAENIAITG-YGTFD 167
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVSSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 160/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVN 103
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I + G + R S I N ++ +TG GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPIIA---TSFEGLETR--RCQSPISARNAENIAITG-YGTFD 157
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 160/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I + G + R S I N ++ +TG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIIA---TSFEGLETR--RCQSPISARNAENIAITG-YGTFD 167
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+G V DG T NT + A++ + G +YVPAG++ T S + S TLYL K A
Sbjct: 87 YGLVADGTTDNTGKLQAALSTCPK-----GGTVYVPAGRYRTSSLFMKSCTTLYLEKGAV 141
Query: 182 LLASQDLNEWPVIK-PLPSY------------GRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
LL D +P++ +PS G D+ AG L+ T + DV+VTG+
Sbjct: 142 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAG----LLNITQVHDVVVTGE 197
Query: 229 NGTID--GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
GT+D Q WW ++ + RP + + ++N+ + +T+ NS SW +HP++ +
Sbjct: 198 -GTLDCDAQNGDWWINQKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKH 255
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ +
Sbjct: 256 LDLLNFNINNPYNAPNTDGIDPESCEYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSCE 315
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
VIR + I +GSEMSGG++D+ +T+ G+R+KT GRG +
Sbjct: 316 HTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDG 374
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIVADNV 454
+ R + M +K F + Y D H A+PV + + DIVA +
Sbjct: 375 LVFRNVEMRGVKTPFVINMFYFCDPDGHSPYVQCRDAMPVDEYTPKLGSLTMEDIVATDA 434
Query: 455 SMA-ARLEGISGDPFTGICIANATI 478
A +G+ P I + N TI
Sbjct: 435 QFAGCYFDGLPEQPIERISMKNVTI 459
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 199/429 (46%), Gaps = 59/429 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+ITD+G T NT AFK AI + ++ GG ++ VPAG WLTG L S+ LYL
Sbjct: 65 NITDYGAESGSITKNTDAFKKAITECNKV---GGGRVVVPAGTWLTGPIELKSNVNLYLD 121
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A ++ S + ++ +++++ Y +LI G+NL+++ +TGD G ++G GA
Sbjct: 122 SGALVIFSSNPEDYKKTDE-------KNSSSNSYKNLISGSNLSNIAITGD-GVLNGNGA 173
Query: 238 LW------------WQQF----------------HKGKLKYTRPYLMEFMYTDNIQISSL 269
W W+ F +K + RP L+ ++ +
Sbjct: 174 FWRPVKKEKVTDSIWKSFVSAGGVLDSAGTTVWPNKQVVNVKRPNLLNLSNCKSVLLDGP 233
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
+ NSP +N+ S N++V+ I + NTDGI+ +C N I + + +GDD +
Sbjct: 234 SFENSPQFNIDINSSENLIVRNTKIFNEYWAQNTDGIDISACKNVLIYNDTVNTGDDGIC 293
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+KSG PT + V+ ++ +GS GG++++ + I T+SG
Sbjct: 294 MKSG-SSSKSNNDEPTLENVVIENCIVNHAHGGFVVGSNTDGGMKNIYVHNCNYIGTDSG 352
Query: 390 VRIKTAVGRGGYVKDIYVRGMTM-HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRD 448
+R K+ +G GG V+DIY+ G+ M + + A NY + N+ K +P Q I+ +
Sbjct: 353 LRFKSDIGNGGKVEDIYIDGINMKNIVNDAIVFDTNYEAKNTNNTSNK-VPNFQNIHISN 411
Query: 449 IVADNVSMAARLEGISGDPFTGICIANATI----GMAAKHKKVPWTCADIGGMTSGVTPP 504
+ D AA ++G+ P + + N TI G +A++ TS V
Sbjct: 412 VFCDGAQEAANIKGLDAVPVKNLDLKNITIKSTNGFSAEN-------------TSNVNLD 458
Query: 505 PCELLPDQG 513
++ P QG
Sbjct: 459 NVKITPSQG 467
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 57/409 (13%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +I +G V DGKT T++ + AI S+ DGG ++ VP+GK+L+G +L ++
Sbjct: 65 RDANYNIVSYGAVADGKTMATESIRKAILACSK---DGGGKVIVPSGKFLSGPIHLENNV 121
Query: 173 TLYLHKDAFLLASQDLNE-WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
L+L + A +L S + ++ +P++ + Y+ LI+ N ++ VTG G
Sbjct: 122 NLHLMEGAEILFSTNPDDFYPLV-----HTSFEGMELMNYSPLIYAKNKKNIAVTGK-GI 175
Query: 232 IDGQGA--LWW---------------QQFHKGKL---------------------KYTRP 253
++GQ + WW Q L +Y RP
Sbjct: 176 LNGQASNDNWWTWKGSSAYGFKPGMPSQLDPNNLPKLMEMADTNVPVSNRTFGNGRYLRP 235
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
+E +N+ I +T++N+P W +HP+ S NI+V G+ I + PN DG++P+ N
Sbjct: 236 NFIEPFECENVLIQGITIINAPFWILHPIKSKNIIVDGVNIRS--HGPNNDGLDPEYSQN 293
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
I++ +GDDC+A+K+G DE G G+ T+ +++R I + + +GSEMS G+
Sbjct: 294 VLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCKMIDGHGGVV-IGSEMSAGV 352
Query: 374 QDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-FWMTGNYGSHAD 430
++V + + + + +R+KT RGG V +YV+ +T+ +K A +T NY + +
Sbjct: 353 RNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEVKEAVLHITMNYKDYKN 412
Query: 431 NHYDPKALPVIQGINYRDI-VADNVSMAARLEGISGDPFTGICIANATI 478
+ P I+ I D+ V + A +G+ I N TI
Sbjct: 413 RTGN--FTPQIRNILLEDVKVKNGGKYAIFADGLENSKIQNITFKNVTI 459
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I + G + R S I N ++ +TG +GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIIA---TSFEGLETR--RCQSPISARNAENIAITG-HGTFD 167
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G L+
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI +++Q GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I + G + R S I N ++ +TG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIIA---TSFEGLETR--RCQSPISARNAENIAITG-YGTFD 167
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V + +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 55/342 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ S+ DFGG GDG T NT+AF A+++LS+ GG L VPAG +LTG + + L
Sbjct: 47 NRVSLPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDL 103
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K+A ++ S D N++ I+ G D A T I + ++ +TG+ G IDG
Sbjct: 104 HLDKNAIIVLSPDKNDFIKIEN----GMKDDKA----TPGINASKRKNISITGE-GIIDG 154
Query: 235 QGALWWQQFHKGKLKYT----------------------------------------RPY 254
G WW+ +GK+ T RP+
Sbjct: 155 NGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L+ F +N+ + +TLLNSP +++ P +N+++ GIT+ P + N D I+ SC
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I + I +GDD + +K+G G+ YG P ++I T + + + +GSE SGG++
Sbjct: 274 LIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEFSGGMK 331
Query: 375 DVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
++ K T++G+R K+AV RGG ++I++ + M +K
Sbjct: 332 NIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 184/407 (45%), Gaps = 73/407 (17%)
Query: 69 MSRLRSQVTKLVPLLIV-VALL-SQRGAESRKARRLDSFEYNAI----------SCRAHS 116
+SR+ + + KL L +ALL +Q ++ +D Y + S ++
Sbjct: 16 VSRMNTLLKKLFTLTTFSLALLPAQNAVHAQCKNSIDENIYKELPFNMPKVEQPSFPDYT 75
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
SI FG DG T NTKA DAI ++ + GG ++ +P G WLTG L+S+ L+
Sbjct: 76 VSILQFGAKSDGTTLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNLHT 132
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K+A ++ + D N +P+ L + G + R S I N ++ +TG G DG G
Sbjct: 133 EKNALVVFTDDFNAYPI---LETSFEGLNTR--RCQSPISARNAENIAITG-YGVFDGSG 186
Query: 237 ALW------------WQQFHK--------------GKLK--------------------- 249
W W K G LK
Sbjct: 187 DSWRPVKKSKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEWN 246
Query: 250 ----YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S N D
Sbjct: 247 EIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDA 306
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
++ +SC N I + +GDD + +KSG DE G G P + ++++ T + + + +
Sbjct: 307 LDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFV-V 365
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
GSEMSGG++++ D + T+ G+R K+ GRGG V+ IY+ + M
Sbjct: 366 GSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 412
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 157/343 (45%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGIWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ VTG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIIDTSFEGLETR-----RCQSPISARNAENIAVTG-YGTFD 167
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 168 GNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 55/342 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ S+ DFGG GDG T NT+AF A+++LS+ GG L VPAG +LTG + + L
Sbjct: 47 NRVSLPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDL 103
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K+A ++ S D N++ I+ G D A T I + ++ +TG+ G IDG
Sbjct: 104 HLDKNAIIVLSPDKNDFIKIEN----GMKDDKA----TPGINASKRKNISITGE-GIIDG 154
Query: 235 QGALWWQQFHKGKLKYT----------------------------------------RPY 254
G WW+ +GK+ T RP+
Sbjct: 155 NGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L+ F +N+ + +TLLNSP +++ P +N+++ GIT+ P + N D I+ SC
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I + I +GDD + +K+G G+ YG P ++I T + + + +GSE SGG++
Sbjct: 274 LIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEFSGGMK 331
Query: 375 DVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
++ K T++G+R K+AV RGG ++I++ + M +K
Sbjct: 332 NIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 59/440 (13%)
Query: 72 LRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAI---SCRAHSASITDFGGVGDG 128
+R + L+ LL V + S + KA + + I S + ITDFG D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 129 KTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD 187
+ + +AINQ + Q S GG + VP G + TG L S+ +L + A L S D
Sbjct: 62 EAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 188 LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHK 245
+ + + + G D LI+ +++ +TG G IDGQG++ WW
Sbjct: 119 QSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGSMETWWPMC-- 171
Query: 246 GKLKY-------------------------------------TRPYLMEFMYTDNIQISS 268
G +KY RP L+ I I
Sbjct: 172 GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEG 231
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+C +GDDC+
Sbjct: 232 VTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCI 289
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINT 386
A+KSG +E G + +P++ +++R + + + +GSE+SGG +++ ED + + N
Sbjct: 290 AIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEISGGYRNLFVEDCRMDSPNL 348
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
+ +RIKT+ RGG +++++VR +T+ + A + N P+++ ++
Sbjct: 349 DRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCKRGFDPIVRNVHL 407
Query: 447 RDIVADNVSMAARLEGISGD 466
+++ + + + G+ D
Sbjct: 408 KNVTCEKSKLGVLIIGLEDD 427
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 55/342 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ S+ DFGG GDG T NT+AF A+++LS+ GG L VPAG +LTG + + L
Sbjct: 47 NRVSLPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDL 103
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L K+A ++ S D N++ I+ G D A T I + ++ +TG+ G IDG
Sbjct: 104 HLDKNAIIVLSPDKNDFIKIE----NGMKDDKA----TPGINASKRKNISITGE-GIIDG 154
Query: 235 QGALWWQQFHKGKLKYT----------------------------------------RPY 254
G WW+ +GK+ T RP+
Sbjct: 155 NGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L+ F +N+ + +TLLNSP +++ P +N+++ GIT+ P + N D I+ SC
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I + I +GDD + +K+G G+ YG P ++I T + + + +GSE SGG++
Sbjct: 274 LIINNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEFSGGMK 331
Query: 375 DVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
++ K T++G+R K+AV RGG ++I++ + M +K
Sbjct: 332 NIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 188/422 (44%), Gaps = 68/422 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG DG T NT+A +AI + GG ++ +P G WLTG L S+ L
Sbjct: 50 YQVNICDFGAKSDGVTLNTEAINNAIKVVHD---KGGGKVVIPEGLWLTGPIVLQSNVNL 106
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ K+A ++ S D + +P+I + G DA R S I N ++ +TG G DG
Sbjct: 107 HAEKNALIVFSSDTSLYPIIT---TSFEGLDAK--RCQSPISAMNAENIAITG-YGVFDG 160
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W+ ++G LK
Sbjct: 161 AGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITS 220
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + I + +T NSPSW +HP+ ++ + + + P S
Sbjct: 221 EEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQ 280
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I +C+ +GDD + +KSG DE G G P + +++R T + +
Sbjct: 281 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGG 340
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + I T+ G+R K+A GRGG V++IY+ + M + +
Sbjct: 341 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 399
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + +P + P + I D+ AA L G+ P I I N
Sbjct: 400 ADLYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 459
Query: 477 TI 478
+
Sbjct: 460 VV 461
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 87/121 (71%)
Query: 107 YNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSF 166
Y CR H A +T++G VGDG+T NT AF A+ L++ + DGGA L VP GKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 167 NLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVT 226
NL S FTLYL + A +LASQD+ WP+I PLPSYGRGRD RY++ I G+NLTDVI+T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 227 G 227
G
Sbjct: 155 G 155
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 188/422 (44%), Gaps = 68/422 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG DG T NT+A +AI + GG ++ +P G WLTG L S+ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINNAIKVVHD---KGGGKVVIPEGLWLTGPIVLQSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ K+A ++ S D + +P+I + G DA R S I N ++ +TG G DG
Sbjct: 113 HAEKNALIVFSSDTSLYPIIT---TSFEGLDAK--RCQSPISAMNAENIAITG-YGVFDG 166
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W+ ++G LK
Sbjct: 167 AGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITS 226
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + I + +T NSPSW +HP+ ++ + + + P S
Sbjct: 227 EEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQ 286
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I +C+ +GDD + +KSG DE G G P + +++R T + +
Sbjct: 287 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGG 346
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + I T+ G+R K+A GRGG V++IY+ + M + +
Sbjct: 347 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 405
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + +P + P + I D+ AA L G+ P I I N
Sbjct: 406 ADLYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
Query: 477 TI 478
+
Sbjct: 466 VV 467
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 171/354 (48%), Gaps = 64/354 (18%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +I +G DG T NTKA AI + GG + VPAG WLTG L ++
Sbjct: 267 RKDTFNICRYGAKADGLTVNTKAISQAIEACH---AAGGGTVLVPAGLWLTGPIVLKNNV 323
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L++ K+A L S++ +++P++ + G+++ R + I+G +LT++ +TG+ G +
Sbjct: 324 NLHIAKNALLQFSRNHDDYPIV---ITTWEGQESY--RCQAPIWGVDLTNIGITGE-GVL 377
Query: 233 DGQGALW------------WQQF--------HKGKLKY---------------------- 250
DG G +W W KG L Y
Sbjct: 378 DGGGEVWRAIKRDKQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRILNGIH 437
Query: 251 ------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
RP ++ N+ + +T NSP+W +HP+ ++ ++ +T+
Sbjct: 438 PTPTELESYKDFLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHW 497
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
+ N+D ++ +SC N +E C +GDD + +KSG DE G G+PT+ +I+
Sbjct: 498 YAQNSDALDLESCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCKVYHA 557
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + +GSEMSGG++++ + + ++ G+R KTA GRGG V+DIYV + M
Sbjct: 558 HGGFV-IGSEMSGGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNM 610
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 59/398 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG D T A + AI+ Q GG ++ VPAG+WLTG+ +L S+ L++ K
Sbjct: 450 ITDFGAKPDADC--TDAIRAAIDACHQA---GGGRVVVPAGEWLTGAIHLRSNVNLHVAK 504
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG-- 236
A L DL ++P++ + R ++ I+ ++ +TG+ GT+DG
Sbjct: 505 GATLRWVFDLAKYPIV-----FTRWEGVECMNFSPFIYAWEQENIAITGE-GTLDGGSDW 558
Query: 237 ALWW------------QQFHKGKL------------------KYTRPYLMEFMYTDNIQI 266
+ WW Q+ + +L + RP ++ NI I
Sbjct: 559 STWWGWNDKRDGTAPKQRAARNRLIQMGETNVPVAERVFGANDFLRPNFVQPYRCKNILI 618
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
++++ SP W +HPV S NI V+ + I + PN DG +P+SC + +ED +GDD
Sbjct: 619 EGVSIIRSPMWELHPVLSQNITVRNVKITS--HGPNNDGFDPESCRDILVEDTLFDTGDD 676
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAI 384
C+A+KSG + G +PT+ +VIRR + + LGSE +GGI+++ ED + +
Sbjct: 677 CIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHGGVV-LGSECTGGIRNIFVEDCEMDSP 735
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA----LPV 440
+ + G+R K RGG ++++++R + + + G D Y+ A P+
Sbjct: 736 DLDRGLRFKNNAVRGGVLENVFMRNVKIGRV-------GEAVLTIDLLYEEGAKGAFKPI 788
Query: 441 IQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
++ + +I + + G G I I+N+T
Sbjct: 789 VRNVQMENITSSASPRVMYIRGFPGAVIEDIRISNSTF 826
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 157/343 (45%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGIWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ +TG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIIDTSFEGLETR-----RCQSPISARNAENIAITG-YGTFD 167
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 168 GNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 193/408 (47%), Gaps = 53/408 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D +++ +AINQ + Q S GG + VP G + TG L S +L
Sbjct: 52 ITDFGAKVDDESN---LCHEAINQAILQCSLAGGGTVLVPKGTFYTGPITLKSDVNFHLE 108
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D R LI+ +++ +TG G IDGQG+
Sbjct: 109 EGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAR--PLIYAYGESNIAITG-KGIIDGQGS 163
Query: 238 L--WWQQFHKGKLKYT-----------------------------------RPYLMEFMY 260
+ WW K + RP L+
Sbjct: 164 IDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMRPQLLNLHS 223
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
I I +TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+C
Sbjct: 224 CHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCT 281
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG +E G + +P++ +++R + + + +GSE+SGG +++ ED
Sbjct: 282 FDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGG-VVIGSEISGGYRNLFVED 340
Query: 381 IK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ + N + +RIKT+ RGG +++I+VR +T+ + A + N
Sbjct: 341 CQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCREAV-LRINLQYENREKCKRGFE 399
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDP-FTGICIANATIGMAAKHK 485
P+++ ++ +++ + + + G+ D + I I ++ AK +
Sbjct: 400 PIVRNVHLKNVTCEKSELGVLIIGLEDDKHVSNISIEDSHFNNVAKGR 447
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 158/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q GG ++ +P G WLTG L+S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVN 103
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + + +P+I R R S I N ++ +TG +GT D
Sbjct: 104 LYTEQNALVLFTGNFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFD 157
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 184/385 (47%), Gaps = 40/385 (10%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+G V DG T NT + A++ + G +YVPAG++ T S L S+ TLYL K A
Sbjct: 79 YGLVADGTTDNTLKLQAALSTCPK-----GGTVYVPAGRYRTCSLFLKSNTTLYLEKGAV 133
Query: 182 LLASQDLNEWPVIK-PLPSY------------GRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
LL D +P++ +PS G D+ AG L+ T + DV+VTG+
Sbjct: 134 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAG----LLNITQVHDVVVTGE 189
Query: 229 NGTID--GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
GT+D + WW ++ + RP + + ++NI + +T+ NS SW +HP++ +
Sbjct: 190 -GTLDCDAENGDWWVTPKIKRIAW-RPRAVAAVDSENICLHGITVQNSYSWTIHPIFVKH 247
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ +
Sbjct: 248 LDLLNFNINNPYNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCE 307
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
VIR + I +GSEMSGG++D+ +T+ G+R+KT GRG +
Sbjct: 308 HTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDG 366
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDIVADNV 454
+ R + M +K F + Y D H A+PV + + DIVA +
Sbjct: 367 LVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQCRDAMPVDEYTPKLGSLTMEDIVATDA 426
Query: 455 SMA-ARLEGISGDPFTGICIANATI 478
A +G+ P + + N TI
Sbjct: 427 QFAGCYFDGLPEQPIERVSMKNVTI 451
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 56/390 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + + +AINQ + Q S GG + VP G + TG L S+ +L
Sbjct: 52 ITDFGAKTDDEAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 108
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D LI+ +++ +TG G IDGQG+
Sbjct: 109 EGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGS 163
Query: 238 L--WWQQFHKGKLKY-------------------------------------TRPYLMEF 258
+ WW G +KY RP L+
Sbjct: 164 METWWPMC--GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNL 221
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
I I +TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+
Sbjct: 222 HSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIEN 279
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG +E G + +P++ +++R + + + +GSE+SGG +++
Sbjct: 280 CTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEISGGYRNLFV 338
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
ED + + N + +RIKT+ RGG ++++YVR +T+ + A + N
Sbjct: 339 EDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRG 397
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGD 466
P+++ ++ +++ + + + G+ D
Sbjct: 398 FDPIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 162/327 (49%), Gaps = 33/327 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG G+ +T A + AI + + L +PAG++LTGS L S TL+L
Sbjct: 5 NVCDFGADPSGRQVSTAAIQRAIAKTGHNDT-----LVIPAGRFLTGSLFLKSGMTLHLE 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL SQ L+++P+I + R AA +I N DV +TG GTIDGQG
Sbjct: 60 AGAQLLGSQSLDDYPLIDTRVAGIDMRWPAA-----IINIINCHDVSITG-GGTIDGQGL 113
Query: 238 LWWQQF----HKGKL---------------KYTRPYLMEFMYTDNIQISSLTLLNSPSWN 278
+WWQ+F +G + RP + ++ I + T S WN
Sbjct: 114 VWWQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFWN 173
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
VH YS +I + + I + P+TDGI+ DSC R+E C + DD + +K+G +
Sbjct: 174 VHLCYSRHITLDSVQI-SNSAGPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQEA 232
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ + +VIR C + I LGSE SGGI+ V E + T G RIK+A R
Sbjct: 233 ASKARSARDIVIR--DCTPNSGSGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSARNR 290
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GG+++DI VR + + +++ + N+
Sbjct: 291 GGFIRDIKVRHLQLVDVRFPVMIQLNW 317
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 185/398 (46%), Gaps = 72/398 (18%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + + +AINQ + Q S GG + VP G + TG L S+ +L
Sbjct: 42 ITDFGAKTDDEAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 98
Query: 178 KDAFLLASQD--------LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
+ A L S D L W I ++ LI+ +++ +TG
Sbjct: 99 EGAVLKFSTDQSLYFPAVLTRWEGIDCYNAH------------PLIYAYGESNIAITG-K 145
Query: 230 GTIDGQGAL--WWQQFHKGKLKY------------------------------------- 250
G IDGQG++ WW G +KY
Sbjct: 146 GIIDGQGSMETWWPMC--GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDG 203
Query: 251 TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDS 310
RP L+ I I +TLLNSP W +HP++ +++V G+T+ PN DG +P+S
Sbjct: 204 MRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPES 261
Query: 311 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMS 370
C N IE+C +GDDC+A+KSG +E G + +P++ +++R + + + +GSE+S
Sbjct: 262 CKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEIS 320
Query: 371 GGIQDVRAEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
GG +++ ED + + N + +RIKT+ RGG ++++YVR +T+ + A + N
Sbjct: 321 GGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYE 379
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
P+++ ++ +++ + + + G+ D
Sbjct: 380 NREKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLEDD 417
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 158/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q GG ++ +P G WLTG L+S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVN 113
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ +TG +GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISVRNAENIAITG-HGTFD 167
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G L+
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINT 227
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 157/343 (45%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q+ GG ++ +P G WLTG L+S+
Sbjct: 56 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVN 112
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ +TG GT D
Sbjct: 113 LYTERNALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFD 166
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G LK
Sbjct: 167 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINT 226
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + I + +T NSPSW +HP+ + V I +I P S
Sbjct: 227 DEEWNEIRPWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 286
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KS DE G G P + ++++ T + +
Sbjct: 287 QNGDAIDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 181/408 (44%), Gaps = 64/408 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG +GDG + NT+A + +S GG + +PAG WLTG L S L+
Sbjct: 30 NIADFGAIGDGLSDNTEA---FAAAIEACASQGGGTVLIPAGLWLTGPIRLQSGIRLHAD 86
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A + S + +++P+I+ SY R R I+G +L +V +TG G DG G
Sbjct: 87 AGALVHFSANRDDYPLIRT--SYEGLRTV---RCMPAIYGEDLENVAITG-TGIFDGSGE 140
Query: 238 LW------------WQQ------FHKGKL------------------------------- 248
W W+Q + +G +
Sbjct: 141 AWRPVKRMKLTEGQWKQLIQSGGYEEGGVWWPTEQSLKSAALVKSLIAQNVQDPSAFEPA 200
Query: 249 -KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGIN 307
+ RP L++ + T NSP+WNVHP ++ ++ ++I S N DG++
Sbjct: 201 RDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGLD 260
Query: 308 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGS 367
DSC I D GDD + +KSG D G A +PT+ + IR + + +GS
Sbjct: 261 LDSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFHGHGGFV-IGS 319
Query: 368 EMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGS 427
EMSG ++++ D I T++G+R K+ GRGG V+ IY+RG+ M + + +Y S
Sbjct: 320 EMSGDVRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYS 379
Query: 428 HADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFTGI 471
+N DP A+ PV + + D A ++G+ P I
Sbjct: 380 GKNNTDDPVAVTEETPVFRDFHISDTTCIGAHTALHIKGLPEMPIENI 427
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 158/343 (46%), Gaps = 63/343 (18%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A+ +I FG GDG NTKA DAI ++Q GG ++ +P G WLTG L+S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVN 103
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
LY ++A +L + D +P+I R R S I N ++ +TG +GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISVRNAENIAITG-HGTFD 157
Query: 234 GQGALW------------WQQF----------------HKGKLK---------------- 249
G G W W++ G L+
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINT 217
Query: 250 ---------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
+ RP L+ + + + + +T NSPSW +HP+ + V I +I P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N D I+ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ ED + T+ G+R K+ GRGG V+
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 190/400 (47%), Gaps = 40/400 (10%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+G V DG+T NT + A++ + G +YVPAG++ T S + S+ TLYL K A
Sbjct: 87 YGLVADGETDNTVRLQAALSTCPK-----GGTVYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 182 LLASQDLNEWPVIK-PLPSY------------GRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
LL D +P++ LPS G D+ AG L+ T + DV+VTG+
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAG----LLNITQVHDVVVTGE 197
Query: 229 NGTID--GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
GT+D Q WW ++ + RP + + ++N+ + +T+ NS SW +HP++ +
Sbjct: 198 -GTLDCDAQNGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSFSWTIHPIFVKH 255
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ +
Sbjct: 256 LDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCE 315
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
VIR + I +GSEMSGG++D+ +T+ G+R+KT GRG +
Sbjct: 316 HTVIRN-CLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDG 374
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV------IQGINYRDIVADNV 454
+ R + M +K F + Y D H +A+PV + + +IVA +
Sbjct: 375 LVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQCREAMPVDEYTPKLGSLTMENIVATDA 434
Query: 455 SMA-ARLEGISGDPFTGICIANATIGMAAKHKKVPWTCAD 493
A +G+ P + + + +I K+ AD
Sbjct: 435 QFAGCYFDGLPEQPIERVTMRDVSITFDPNAKEGQAAMAD 474
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 93/137 (67%)
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SGWDEYGI YG P+ ++IRR+ + S+ +ALGSEMSGGI+ V A+DI+ N+ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IKTA GRGGYVKD+Y+ +TM + TG YG H D+ YDP ALP IQ I ++DI+
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 452 DNVSMAARLEGISGDPF 468
D + A +EGI PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 162/336 (48%), Gaps = 54/336 (16%)
Query: 119 ITDFGG-VGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG V N KA AI S+ GG ++ VP G+WLTG+ L S L +
Sbjct: 47 ITDFGASVRATAARNQKAINRAIATCSR---QGGGRVVVPRGEWLTGAIRLQSRVNLVVE 103
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L + D +P++K Y+ I+ TDV +TG GT+DG G+
Sbjct: 104 EGATLEFAFDPALYPLVKT-----SWEGLECWNYSPCIYAYQATDVGLTG-RGTVDGNGS 157
Query: 238 --LWWQQFHKGKLKYT-------------------------------------RPYLMEF 258
WW K + RP L+ F
Sbjct: 158 RDTWWPMCGAAKYGFVAGQTKEAQSLGARAQLLKMAEDGVPADERRFGMGRGLRPQLVNF 217
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
D I + LTL NSP W +HP+ S+NI V G+T+ PN DG +P++C+N I++
Sbjct: 218 NACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTN--DGPNGDGCDPEACSNVLIQN 275
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG + G + P++ ++IR + + +GSE+SGG ++V A
Sbjct: 276 CTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKDGHGGVV-IGSEISGGCRNVFA 334
Query: 379 ED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
ED + + + + +RIKT RGG +++I +R +T+
Sbjct: 335 EDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTV 370
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 93/137 (67%)
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SGWDEYGI YG P+ ++IRR+ + S+ +ALGSEMSGGIQ V A+D++ N+ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IKTA GRGGYV+D+Y+ +TM + TG YG H D+ YDP ALP IQ I ++DI+
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 452 DNVSMAARLEGISGDPF 468
D + A +EGI PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 212/478 (44%), Gaps = 79/478 (16%)
Query: 69 MSRLRSQVTKLVPLLIVVALLSQRGAES------RKARRLD-SFEYNAISCRA---HSAS 118
M+RL +++T LVP++I + Q A+ KA D F AI + +
Sbjct: 1 MNRL-NRMTGLVPVIIGLFCACQGTAKQVDVETDLKAMYADLPFSMPAIERPVFPDYQVN 59
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I DFG DG T NT+A AI + GG ++ +P G WLTG L S+ L+ K
Sbjct: 60 ICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNLHAEK 116
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+A ++ S D + +P+I + G D R S I N+ ++ +TG G DG G
Sbjct: 117 NALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNVENIAITG-YGVFDGAGDR 170
Query: 239 W------------WQQF----------------HKGKLK--------------------- 249
W W+ ++G LK
Sbjct: 171 WRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWE 230
Query: 250 ----YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+ RP L+ + + + + +T NSPSW +HP+ ++++ + + P S N D
Sbjct: 231 EMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDA 290
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
++ +SC N I +C+ +GDD + +KSG DE G G P + +++R T + + + +
Sbjct: 291 LDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-I 349
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSEMSGG+++V + I T+ G+R K+A GRGG V++IY+ + M + + Y
Sbjct: 350 GSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLY 409
Query: 426 GSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ +P + P + I D+ AA L G+ P I I N +
Sbjct: 410 YAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 184/403 (45%), Gaps = 62/403 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SITDFG V K S TKA ++ S GG ++ +PAG+W +G +L S+ L+L
Sbjct: 61 SITDFGAVEKEKISTTKA---ISQAIAAASDAGGGRVIIPAGEWFSGKIHLKSNVNLHLS 117
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S D ++ LP+ + Y+ LI+ +V +TG G + +
Sbjct: 118 EGAILTFSGDPQDY-----LPAVHTTWEGIECYNYSPLIYAYKCENVAITGA-GQLKAEM 171
Query: 237 ALWWQQF-----HKGKLK----------------------YTRPYLMEFMYTDNIQISSL 269
+W + F H LK + RP ++F N+++ +
Sbjct: 172 GVWKRWFARPPAHMNSLKKLYHMAAKGVAVQERVMVNDTSHLRPQFIQFNRCKNVRMEGV 231
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
T++NSP W +HP N++++ + + A N DG++P+ C N IEDC GDD +A
Sbjct: 232 TIINSPFWVIHPYMCHNVVIRNVKVYA--HGHNNDGVDPEMCENVLIEDCVFDQGDDAIA 289
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+KSG ++ P++ +V+R + + +A+GSE+SGG+++V E+ E
Sbjct: 290 IKSGRNQDAWRLNTPSRNIVVRNCLVKNGHQ-LLAIGSELSGGVENVFLEN---CTVEEN 345
Query: 390 VR------IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--------P 435
R IKT RGGYVK++YVR +T M G G D Y
Sbjct: 346 ARMFHLVFIKTNERRGGYVKNVYVRNVTADKMS-----QGILGIDTDVLYQWRDLVPTYE 400
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
K L I + DI A+ V+ +R+ P I + N +
Sbjct: 401 KRLTPISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRV 443
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 167/346 (48%), Gaps = 54/346 (15%)
Query: 115 HSASITDFGGVGDGKTS-NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
S IT FG + N +A + AI L++ GG ++ VPAGKW TG+ L S
Sbjct: 42 RSVVITKFGAKTTASAAQNQRAIQKAIAFLAR---QGGGKVVVPAGKWHTGALRLSSGIE 98
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L + KDA L + + +P++K Y+ I+ DV+V+G+ GTID
Sbjct: 99 LVVSKDALLQFVFERSLYPLVKT-----SWEGMMCWNYSPCIYSFGSDDVVVSGE-GTID 152
Query: 234 GQGA--LWWQQFHKGKLKYT-------------------------------------RPY 254
G G+ WW K Y RP
Sbjct: 153 GGGSNETWWPMCGKEVFGYVKGVTKEAQVLGSRRRLQQMAEDDVPWDERRFGLGYGLRPQ 212
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L+ F+ + +++S +TLLNSP W +HP+ N+ V G+ I PN DG +P++C N
Sbjct: 213 LINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--EGPNGDGCDPEACENV 270
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I++ + +GDDC+A+KSG + G + P+K ++IRR + I +GSE+SGG
Sbjct: 271 LIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMEDGHGG-IVIGSEISGGCM 329
Query: 375 DVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+V AED + + + + +RIKT RGG +++I VR + + K A
Sbjct: 330 NVFAEDCTMDSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCKEA 375
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 56/390 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + + +AINQ + Q S GG + VP G + TG L S+ +L
Sbjct: 52 ITDFGAKTDDEAN---PCHEAINQAILQCSLAGGGTVIVPKGTFYTGPVTLKSNVNFHLE 108
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D LI+ +++ +TG G IDGQG+
Sbjct: 109 EGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGS 163
Query: 238 L--WWQQFHKGKLKY-------------------------------------TRPYLMEF 258
+ WW G +KY RP L+
Sbjct: 164 METWWPMC--GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNL 221
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
I I +TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+
Sbjct: 222 HSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIEN 279
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG +E G + +P++ +++R + + + +GSE+SGG +++
Sbjct: 280 CTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEISGGYRNLFV 338
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
ED + + N + +RIKT+ RGG ++++YVR +T+ + A + N
Sbjct: 339 EDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRG 397
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGD 466
P+++ ++ +++ + + + G+ D
Sbjct: 398 FDPIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 185/390 (47%), Gaps = 56/390 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + + +AINQ + Q S GG + VP G + TG L S+ +
Sbjct: 52 ITDFGAKTDDEAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHFE 108
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D LI+ +++ +TG G IDGQG+
Sbjct: 109 EGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGS 163
Query: 238 L--WWQQFHKGKLKY-------------------------------------TRPYLMEF 258
+ WW G +KY RP L+
Sbjct: 164 METWWPMC--GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNL 221
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
I I +TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+
Sbjct: 222 HSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIEN 279
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG +E G + +P++ +++R + + + +GSE+SGG +++
Sbjct: 280 CTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEISGGYRNLFV 338
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
ED + + N + +RIKT+ RGG ++++YVR +T+ + A + N
Sbjct: 339 EDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENREKCKRG 397
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGD 466
P+++ ++ +++ + + + G+ D
Sbjct: 398 FDPIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 56/390 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + + +AINQ + Q S GG + VP G + TG L S+ +L
Sbjct: 52 ITDFGAKTDDEAN---PCHEAINQAILQCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLE 108
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D LI+ +++ +TG G IDGQG+
Sbjct: 109 EGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGIIDGQGS 163
Query: 238 L--WWQQFHKGKLKY-------------------------------------TRPYLMEF 258
+ WW G +KY RP L+
Sbjct: 164 METWWPMC--GAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNL 221
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
I I +TLLNSP W +HP++ +++V G+T+ PN DG +P+SC N IE+
Sbjct: 222 HSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIEN 279
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG +E G + +P++ +++R + + + +GSE+SGG +++
Sbjct: 280 CTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGG-VVIGSEISGGYRNLFV 338
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
ED + + N + +RIKT+ RGG +++++VR +T+ + A + N
Sbjct: 339 EDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCKRG 397
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGD 466
P+++ ++ +++ + + + G+ D
Sbjct: 398 FDPIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 33/327 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DF V D + +T+A + AI+ ++ G + +PAG++LTG+ L S TL L
Sbjct: 5 NIIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLELA 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
KDA LL SQ L ++P I + G D + + + N + +GT+DGQGA
Sbjct: 60 KDAVLLGSQQLEDYPEIATRVA---GIDMV---WPTAMLNINQCRNVTVCGSGTLDGQGA 113
Query: 238 LWWQQF-----HKGKL-KYTR-------------PYLMEFMYTDNIQISSLTLLNSPSWN 278
+WW +F + G L YTR P + ++ + + T +S WN
Sbjct: 114 VWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWN 173
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+H YS + +Q + ++ T P+TDGI+ DS R+E C + DD + VKSG
Sbjct: 174 LHVCYSKQVNLQRLNVMN-ATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEA 232
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ ++IR T + + I LGSE SGGI++V E + T G RIK+A R
Sbjct: 233 QQLARTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GG++K+I VR + M + + F + N+
Sbjct: 291 GGWIKNIIVRHLIMEDVGYPFMLQLNW 317
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 186/429 (43%), Gaps = 73/429 (17%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ + +I DFG V + TKA DAI + S+ GG + +P+G W TG L S+
Sbjct: 55 KKDTLNIVDFGAVPNTGELCTKAINDAIMKCSE---SGGGVVAIPSGLWTTGPIYLKSNV 111
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+ A++L + DLN++ +I SY G R S I G L ++ +TG G
Sbjct: 112 NLHTQNGAYILFTSDLNQYKLIN---SYFEGNKVI--RCESPIMGVGLENIAITGK-GIF 165
Query: 233 DGQGALW------------WQQF-------------------------HKGKL------- 248
DG G+ W W+ K KL
Sbjct: 166 DGNGSKWRPVKIGKMSDEQWKNMVNSGGILSKDRKTWYPSEEALIGNEQKDKLPKVPSIE 225
Query: 249 ------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
+ RP ++ + + + +T NSP+WNV+P+ N+ + + I P S N
Sbjct: 226 NMKPYKQALRPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQN 285
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG++ +SC + +C GDD + +KSG D+ G G PT+ VI+ +
Sbjct: 286 GDGLDLESCRIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHGGF 345
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
+ +GSEMSGG++++ +++ I T+ G+R K+ GRGG V++I++ + M +
Sbjct: 346 V-IGSEMSGGVRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDIPTEAIRF 404
Query: 423 GNYGSHADNHYDP-------------KALPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
Y + DP + PV + + +++I D A ++ GI P
Sbjct: 405 EMYYFNKSGVEDPLTGEMIVEKVPVSETTPVFKNMYFKNIYVDGAKQALKIMGIPEMPVE 464
Query: 470 GICIANATI 478
I N +
Sbjct: 465 NIQFKNMIV 473
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 56/390 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D ++ +AINQ + Q S GG + VP G + TG L S+ +L
Sbjct: 50 ITDFGAKADNESV---PCHEAINQAILQCSLTGGGTVIVPKGTFYTGPITLKSNVNFHLE 106
Query: 178 KDAFL--LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ A L L Q L VI + G D R LI+ T++ +TG GTIDGQ
Sbjct: 107 EGAVLKFLTDQSLYFPGVI----TRWEGLDCYNAR--PLIYAYGETNIAITGK-GTIDGQ 159
Query: 236 GA--LWWQQFHKGKLKYT-----------------------------------RPYLMEF 258
G+ WW K + RP L+
Sbjct: 160 GSNDTWWPMCGAAKYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINL 219
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
I I +TLLNSP W +HP++ +++V+G+ I PN DG +P+SC N IE+
Sbjct: 220 YSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIEN 277
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG + G + +P++ +++R + + + +GSE+SGG +++
Sbjct: 278 CTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGG-VVIGSEISGGYRNLFV 336
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+ + + N + +RIKT+ RGG +++++VR +T+ + A + N + +
Sbjct: 337 ENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDITVGQCREAV-LRINLQYENRENCNRN 395
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGD 466
PV++ ++ +++ + + + G+ D
Sbjct: 396 FPPVVRNVHLKNVTCEKSRLGVLIIGLDDD 425
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 28/330 (8%)
Query: 152 AQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAA--- 208
+ ++P G + T + L S+ TL L K A LL S + LP Y + +
Sbjct: 3 GEFFIPKGTYATKTIFLKSNLTLELEKGATLLYSASFESGAI---LPGYTKNSNHEEYYL 59
Query: 209 --------GRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMY 260
+T+LI G N+++V + G+ G +DG G++ W F K + RP L + ++
Sbjct: 60 GSWEGNPLDTFTALIQGVNVSNVNLIGE-GVLDGNGSIGWWDFPKVRNVAWRPRLFQIIH 118
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ ++ + +TL NSPSW VHP++S ++ + II P SPNTDG++P+SC I +
Sbjct: 119 SHHVNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVH 178
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
GDDC+A+KSG G ++ + IR + + A + +GSEM+GG++ + E
Sbjct: 179 FSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGHGA-VVIGSEMAGGVKHILVEQ 237
Query: 381 IKAINTESGVRIKTAVGRG--GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD---- 434
T+ G+RIKT GRG V+D+ R + M + + Y D H +
Sbjct: 238 CLFNETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPDGHSEYVKT 297
Query: 435 PKALPV------IQGINYRDIVADNVSMAA 458
+ LPV I+ + DI + +AA
Sbjct: 298 KETLPVDYRTPDIRDFCFEDIKCRHSEIAA 327
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 191/392 (48%), Gaps = 44/392 (11%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+A IT+FG V DG+T NT+A + AI+ + G ++ VP G ++TG+ L S
Sbjct: 54 QADRFEITEFGAVADGQTINTEAIQAAIDACT-----AGGKVVVPKGTFVTGAIFLKSRM 108
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTN-----LTDVIVTG 227
TLY+ + LL S + +++PV++ GR+ Y SLI + L +I+ G
Sbjct: 109 TLYIEQGGVLLGSDNPDDYPVMQ---YRWEGREQLC--YASLINTKDPAEGRLEQIIIEG 163
Query: 228 DNGTIDGQG-ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
+ G ID G AL+ ++ + K R + + D + + +T+ SP+W VH +Y +
Sbjct: 164 E-GKIDANGMALFHKEMAEKKGFRGRAVCLRNV--DGVYLKDITVRQSPAWCVHLIYCNG 220
Query: 287 ILVQGITIIAPVTSP--------NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+ V I I N DG+NPDS ++ I + I S DDC+A+KSG +E G
Sbjct: 221 VSVNHIEIHTKKDEQGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEG 280
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
G+P++ + I T S + +A GSEMSGG+++VR D + + S IK GR
Sbjct: 281 RRVGIPSQNIRISNCTFKSGFG--VATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGR 338
Query: 399 GGYVKDIYVRGMTMHTMKWAF----WMTG-----NYGSHADNHYDP-----KALPVIQGI 444
G ++++ V T+ W G + SHAD D + VI+ I
Sbjct: 339 GAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNI 398
Query: 445 NYRDIVAD-NVSMAARLEGISGDPFTGICIAN 475
+ ++IV D + A + G+ P I + N
Sbjct: 399 HLKNIVLDTHAGNAVFMAGLPESPLQNIRLEN 430
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 203/423 (47%), Gaps = 52/423 (12%)
Query: 84 IVVALLSQRGAESRKARRLDSFEYNAISCR--AHSASITDFGGVGDGKTSNTKAFKDAIN 141
+ V +SQ G S+ + ++ +S R A IT+FG V DG+T NT+A + AI+
Sbjct: 72 VYVCSVSQSGEISQPSDKI------KVSTRGQADRFDITEFGAVADGQTINTEAIQAAID 125
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYG 201
+ G ++ VP G ++TG+ L S TLY+ + LL S + +++PV++
Sbjct: 126 ACT-----AGGKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGSDNPDDYPVMQ---YRW 177
Query: 202 RGRDAAAGRYTSLIFGTN-----LTDVIVTGDNGTIDGQG-ALWWQQFHKGKLKYTRPYL 255
GR+ Y SLI + L +I+ G+ G ID G AL+ ++ + K R
Sbjct: 178 EGREQLC--YASLINTKDPAEGRLEQIIIEGE-GKIDANGMALFHKEMAEKKGFRGRAVC 234
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP--------NTDGIN 307
+ + D + + +T+ SP+W VH +Y + + V + I N DG+N
Sbjct: 235 LRNV--DGVYLKDITVRQSPAWCVHLIYCNGVSVNHVEIHTKKDERGRRYEHIFNGDGLN 292
Query: 308 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGS 367
PDS ++ I + I S DDC+A+KSG +E G G+P++ IR CI +A GS
Sbjct: 293 PDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQN--IRISNCIFKSGFGVATGS 350
Query: 368 EMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF----WMTG 423
EMSGG+++VR D + + S IK GRG ++++ V T+ W G
Sbjct: 351 EMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRG 410
Query: 424 -----NYGSHADNHYDP-----KALPVIQGINYRDIVAD-NVSMAARLEGISGDPFTGIC 472
+ SHAD D + VI+ I+ ++IV D + A + G+ P I
Sbjct: 411 AINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIR 470
Query: 473 IAN 475
+ N
Sbjct: 471 LEN 473
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 211/473 (44%), Gaps = 40/473 (8%)
Query: 38 SRSGSAKAIVGNTTKQHSKITYLITTMELSRMSRLRSQVTKLVPLLIVVALLSQRGAESR 97
+RS + + G + ++ + R +R+ + L P L + GAE+
Sbjct: 10 ARSATLETEAGQIFEFDTQGEVYVNGSLYQRTNRVIFSLFGLKPDTEYEVCLKRDGAEAG 69
Query: 98 KARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVP 157
R D +E+ I+ + +FG GDG +T + AI + ++ +P
Sbjct: 70 TVFRTD-YEFVTIN-------VKEFGAKGDGLQDDTGFIQAAI-----LACPKNGRVLIP 116
Query: 158 AGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL-PSYGRGRDAAAG------- 209
G + S L SH L L A L A D ++P + + SY D G
Sbjct: 117 KGTYRITSLFLKSHIRLELGAGAILAADTDRFKYPRLPGMIESYDETEDYNLGTWEGNPL 176
Query: 210 -RYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQI 266
+ +I G + +V++ G+ G IDGQ + WW+ + + RP ++ +I +
Sbjct: 177 PMFAGIINGIEVENVVIYGE-GLIDGQASFENWWKDAGTMRGAF-RPRMVFLERCKDITL 234
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
L NSP+W +HP +S + + I P SPNTDG++P+SC + I + GDD
Sbjct: 235 QGFYLKNSPAWVLHPYFSQGLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDD 294
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+AVKSG G Y P++ + IR+ + + A + +GSE+ G++ VR D +T
Sbjct: 295 CIAVKSGKIYMGRRYKTPSENIEIRQCLMENGHGA-VTVGSEVGAGVKAVRVRDCLFRHT 353
Query: 387 ESGVRIKTAVGRG--GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV 440
+ G+R+KT GRG + DI + + M + F + Y D + +ALP
Sbjct: 354 DRGLRVKTRRGRGKDSVLSDISFQHIVMDHVMTPFVVNSFYFCDPDGKTEYVQCREALPA 413
Query: 441 ------IQGINYRDIVADNVSMAAR-LEGISGDPFTGICIANATIGMAAKHKK 486
IQ +++ DI A N AA L G+ I + N I A + ++
Sbjct: 414 DERTPEIQNLSFTDIKAANCHAAASFLCGLPEQKIRQIELRNVDISFAEQARE 466
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 188/391 (48%), Gaps = 31/391 (7%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A + + FG GDG T +T A + AI+ + Y G +L G +L+G +L S+ T
Sbjct: 22 AKTCDVRAFGAKGDGTTKDTVAIQKAIDTCAGYKKGGVVKLS--GGIFLSGPISLKSNIT 79
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L + + A LL S D ++P + ++ R L+ N ++ +TG GTID
Sbjct: 80 LDIAEGATLLGSPDREDYPKV----TFAR-----QPTVQPLVGSVNAENITITG-GGTID 129
Query: 234 GQGALWWQQFHKGKL------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
G G +WW+ H K + RP + F ++ +I++ +T+ N+ W + P Y+ ++
Sbjct: 130 GNGHIWWEYVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNAGFWQIVPYYADDL 189
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
+ + + I+AP SPNTD I+P S +N I+ + GDD VA+KSG P+K
Sbjct: 190 VFRNLKILAP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSGAIN-SPGPDAPSKN 247
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I C +++GSE++GG+Q+V AE I T+ G+RIK RG V +I
Sbjct: 248 ITITD--CTFENGHGLSIGSEIAGGVQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISF 305
Query: 408 RGMTMHTMKWAFWMTGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEG 462
+ + M +K A +T Y A + P + P I ++ A A + G
Sbjct: 306 KDIDMVDVKTAILITEYYPKAAPDGEVPSMPMGRLTPRFHDIAIENVHATGSGSAGTIVG 365
Query: 463 ISGDPFTGICIAN----ATIGMAAKHKKVPW 489
+ P G+ + N A G+ + KV +
Sbjct: 366 LPESPVEGLSLKNVDLQAKTGLKIAYAKVAF 396
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 93/137 (67%)
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SGWDEYGI YG P+ ++IRR+ + S+ ++LGSEMSGGI+ V A+DI+ N+ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IKTA GRGGYVKD+Y+ +TM + TG YG H D+ YDP ALP IQ I ++DI+
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 452 DNVSMAARLEGISGDPF 468
D + A +EGI PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 168/371 (45%), Gaps = 48/371 (12%)
Query: 151 GAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR 210
G ++ +P+G W TG L S T L + + L+ D + + +P Y R +
Sbjct: 34 GGEVLIPSGTWHTGPVTLASGITFRLAEGSRLVFIPDEDLY-----VPVYSRWEGVSCWC 88
Query: 211 YTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGK----------------------- 247
+F + DV VTG G IDG G WW+ + +
Sbjct: 89 MHPCLFISESHDVTVTG-TGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPGYAD 147
Query: 248 ---------LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
++ RP L++ + + + + +TL SP W +HPV+SS + + + II P
Sbjct: 148 QPGGGGGRQCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPA 207
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
+PNTDGI+ DSC + + C + GDD +A+KSG GIA G PT+ + + T S
Sbjct: 208 DAPNTDGIDIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTVRSA 267
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+ I +GSE + GI + AED T+ G+RIKT GRGG + D+ +TM
Sbjct: 268 HGG-IVIGSETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCP 326
Query: 419 FWMTGNY------GSHADNHYDP--KALPVIQGINYRDIVA-DNVSMAARLEGISGDPFT 469
+ Y GS +P P I I RD VA + + A + G+ P T
Sbjct: 327 LAINMYYRCGTTEGSLFSLSPEPIDDTTPSIGNILVRDCVATGSQASAGFIVGLPERPIT 386
Query: 470 GICIANATIGM 480
+ + +++ G+
Sbjct: 387 ELVVEDSSFGV 397
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 183/383 (47%), Gaps = 56/383 (14%)
Query: 72 LRSQVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTS 131
++ T LV L + + L+Q E+ + S + R +S IT FG +
Sbjct: 1 MKQLSTLLVALFLPLFALAQSWDEAMYKQIEQSIRMPQFADREYS--ITQFGASPKASAA 58
Query: 132 -NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNE 190
N KA AI S+ GG ++ VP G+WLTG+ + SH L + + A L + +
Sbjct: 59 KNQKAINRAILMCSK---KGGGRIVVPRGEWLTGAIRMQSHVNLVVEEGATLKFAFEPEL 115
Query: 191 WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA--LWWQQ------ 242
+P++K Y+ I+ TDV +TG GTIDG G+ WW
Sbjct: 116 YPLVKT-----SWEGIGCWNYSPCIYAYQATDVALTG-KGTIDGNGSKQTWWPMCGAPRY 169
Query: 243 -FHKGK-------------LKYT-----------------RPYLMEFMYTDNIQISSLTL 271
F KG+ LKY R L+ F+ +D I I L L
Sbjct: 170 GFVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKGLRSQLVNFVESDGILIKDLHL 229
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
+NSP W +HP+ S NI V G+ + PN DG +P++C I++C +GDDC+A+K
Sbjct: 230 VNSPFWVIHPLLSKNITVDGVFV--QNDGPNGDGCDPEACDGVLIQNCTFDTGDDCIAIK 287
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESG 389
SG + G + P++ ++IR + + +GSE+SGG ++V AED + + + +
Sbjct: 288 SGRNNDGRLWNKPSQNIIIRNCKMADGHGGVV-IGSEISGGCRNVFAEDCYMDSPHLDRV 346
Query: 390 VRIKTAVGRGGYVKDIYVRGMTM 412
+RIKT RGG +++I +R +T+
Sbjct: 347 LRIKTNNCRGGLIENINMRNVTV 369
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 158/352 (44%), Gaps = 34/352 (9%)
Query: 151 GAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR 210
G L VP G++ L + TL+L + A L A D WP++ P GR G
Sbjct: 111 GGTLRVPPGRFAISPVFLKARMTLWLEEGAELCALHDRAGWPILPPRDDAGR----VIGT 166
Query: 211 YTSL---IFGTNLTDVIVTGDNGTIDGQGAL--------WWQQFHKGKLKYTRPYLMEFM 259
+ L F LT + D TI G G L WW + + RP +
Sbjct: 167 WEGLPEAAFAAPLT--AIDCDGLTITGLGILDAGGDRGDWWSWPKETRAGARRPRALFLA 224
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ +Q+S +T+ NSPSW VHP + G+ I P SPNTDG+NP+SCT+ +
Sbjct: 225 HGQGVQLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGI 284
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGM-----PTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
+ GDDC+AVKSG G G+ PT++L + + + LGSEMSG I
Sbjct: 285 HFSVGDDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHGGMV-LGSEMSGDIT 343
Query: 375 DVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD 434
DV + I T+ G+RIKT GRGG V ++ + M + + Y D
Sbjct: 344 DVTVTACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYCDPDGRSP 403
Query: 435 P----------KALPVIQGINYRDIVADNVSMAA-RLEGISGDPFTGICIAN 475
+ P I I + D++A +V + A + G+ P TG+ + N
Sbjct: 404 EVQSRSPAPVDETTPKIHDITFSDVIATDVPVCAVAVLGLPEAPVTGVRLKN 455
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 204/466 (43%), Gaps = 76/466 (16%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRA--------HSASITDFGGVGDGKT 130
LV LL++ + + +E + D ++ S A + +I DFG +G T
Sbjct: 13 LVGLLLLASCQAYSDSEDKTIEMEDLYKDLPFSMPAIERPVFPDYQVNICDFGAKSNGVT 72
Query: 131 SNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNE 190
NT+A +AI + GG ++ +P G WLTG L S+ L+ K+A ++ S D +
Sbjct: 73 LNTEAINNAIKAVHD---KGGGKVVIPEGLWLTGPIVLQSNVNLHAEKNALIVFSSDTSL 129
Query: 191 WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW----------- 239
+P+I + G D R S I N ++ +TG G DG G W
Sbjct: 130 YPIIT---TSFEGLDVK--RCQSPISAMNAENIAITG-YGVFDGAGDRWRPVKKDKMTDR 183
Query: 240 -WQQF----------------HKGKLK-------------------------YTRPYLME 257
W+ ++G LK + RP L+
Sbjct: 184 QWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRTEITSEEWEDMKSWLRPVLLS 243
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
+ + I + +T NSPSW +HP+ ++++ + + P S N D ++ +SC N I
Sbjct: 244 IVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIA 303
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
+C+ +GDD + +KSG DE G G P + +++R T + + + +GSEMSGG+++V
Sbjct: 304 NCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-IGSEMSGGVKNVY 362
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP-- 435
+ I T+ G+R K+A GRGG V++IY+ + M + + Y + +P
Sbjct: 363 VSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAVKSAPGEPVP 422
Query: 436 ---KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ P + I D+ AA L G+ P I I N +
Sbjct: 423 SVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 468
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 189/400 (47%), Gaps = 40/400 (10%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+G V DG+T NT + A++ + G +YVPAG++ T S + S+ TLYL K A
Sbjct: 87 YGLVADGETDNTVRLQAALSTCPK-----GGTVYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 182 LLASQDLNEWPVIK-PLPSY------------GRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
LL D +P++ LPS G D+ AG L+ T + DV+VTG+
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAG----LLNITQVHDVVVTGE 197
Query: 229 NGTID--GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
GT+D + WW ++ + RP + + ++N+ + +T+ NS SW +HP++ +
Sbjct: 198 -GTLDCDAENGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKH 255
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ +
Sbjct: 256 LDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCE 315
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKD 404
VIR + I +GSEMSGG++D+ +T+ G+R+KT GRG +
Sbjct: 316 HTVIRN-CLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDG 374
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNH------YDPKAL----PVIQGINYRDIVADNV 454
+ R + M +K F + Y D H +P + P + + +IVA +
Sbjct: 375 LVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQCREPLPVDEYTPKLGSLTMENIVATDA 434
Query: 455 SMA-ARLEGISGDPFTGICIANATIGMAAKHKKVPWTCAD 493
A +G+ P + + + +I K+ AD
Sbjct: 435 QFAGCYFDGLPEQPIERVTMRDVSITFDPNAKEGQAAMAD 474
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 211/478 (44%), Gaps = 79/478 (16%)
Query: 69 MSRLRSQVTKLVPLLIVVALLSQRGAES------RKARRLD-SFEYNAISCRA---HSAS 118
M+RL +++T LVP++I + Q A+ KA D F AI + +
Sbjct: 1 MNRL-NRMTGLVPVIIGLFCACQGTAKQVDVETDLKAMYADLPFSMPAIERPVFPDYQVN 59
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I DFG DG T NT+A AI + GG ++ +P G WLTG L S+ L+ K
Sbjct: 60 ICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNLHAEK 116
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+A ++ S D + +P+I + G D R S I N ++ +TG G DG G
Sbjct: 117 NALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNAENIAITG-YGVFDGAGDR 170
Query: 239 W------------WQQF----------------HKGKLK--------------------- 249
W W+ ++G LK
Sbjct: 171 WRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWE 230
Query: 250 ----YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
+ RP L+ + + + + +T NSPSW +HP+ ++++ + + P S N D
Sbjct: 231 EMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDA 290
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
++ +SC N I +C+ +GDD + +KSG DE G G P + +++R T + + + +
Sbjct: 291 LDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-I 349
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSEMSGG+++V + I T+ G+R K+A GRGG V++IY+ + M + + Y
Sbjct: 350 GSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLY 409
Query: 426 GSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ +P + P + I D+ AA L G+ P I I N +
Sbjct: 410 YAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 166/356 (46%), Gaps = 24/356 (6%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I DFG + N +A + AI + G L +PAG W +G L S+ TL + +
Sbjct: 88 IRDFGASTE-SADNARAIQSAIAAIP-----AGGTLRLPAGSWSSGPVFLKSNMTLLIEE 141
Query: 179 DAFLLASQDLNEWPVIKPLPSYGR----GRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
A L + V+ + GR A + SLI + ++ +TG GTIDG
Sbjct: 142 GAVLADTGSRQGRKVLPARHADGRVLGTWEGVAEPCFASLINAIDCQNLAITG-QGTIDG 200
Query: 235 QG--ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
G WW + + RP + ++ +S +T+ NSPSW +HPV ++L G+
Sbjct: 201 GGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVLAVGL 260
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI SPNTDG+NP++ ++ R+ I GDDC+A+K+G + PT+++ IR
Sbjct: 261 TIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRVEIRN 320
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ A + +GSEMS GI DV + T+ G+RIKT GRGG V DI++ M
Sbjct: 321 CLMQLGHGAVV-MGSEMSRGIHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHLSQCRM 379
Query: 413 HTMKWAFWMTGNYGSHADNHYD------PKAL----PVIQGINYRDIVADNVSMAA 458
+ + Y AD + P L P I I RD+V AA
Sbjct: 380 DGVATPIAVNAFYFCDADGRSEYVQSRNPLPLSIETPRISNITIRDVVVSGAETAA 435
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 204/423 (48%), Gaps = 52/423 (12%)
Query: 84 IVVALLSQRGAESRKARRLDSFEYNAISCR--AHSASITDFGGVGDGKTSNTKAFKDAIN 141
+ V +SQ G S+ + ++ +S R A IT+FG V DG+T NT+A + AI+
Sbjct: 72 VYVCSVSQSGEISQPSDKI------KVSTRGQADRFDITEFGAVADGQTLNTEAIQAAID 125
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYG 201
+ G ++ VP G ++TG+ L S TLY+ + LL S + +++PV++
Sbjct: 126 ACT-----AGGKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGSDNPDDYPVMQ---YRW 177
Query: 202 RGRDAAAGRYTSLIFGTN-----LTDVIVTGDNGTIDGQG-ALWWQQFHKGKLKYTRPYL 255
GR+ Y SLI + L +I+ G+ G ID G AL+ ++ + K R
Sbjct: 178 EGREQLC--YASLINTKDPAEGRLEQIIIEGE-GKIDANGMALFHKEMAEKKGFRGRAVC 234
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP--------NTDGIN 307
+ + D + + +T+ SP+W VH +Y + + V I I N DG+N
Sbjct: 235 LRNV--DGVYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEHGRRYEHIFNGDGLN 292
Query: 308 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGS 367
PDS ++ I + I S DDC+A+KSG +E G G+P++ + I T S + +A GS
Sbjct: 293 PDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFKSGFG--VATGS 350
Query: 368 EMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF----WMTG 423
EMSGG+++VR D + + S IK GRG ++++ V T+ W G
Sbjct: 351 EMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRG 410
Query: 424 -----NYGSHADNHYDP-----KALPVIQGINYRDIVAD-NVSMAARLEGISGDPFTGIC 472
+ SHAD D + VI+ I+ ++IV D + A + G+ P I
Sbjct: 411 AINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIR 470
Query: 473 IAN 475
+ N
Sbjct: 471 LEN 473
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 193/402 (48%), Gaps = 57/402 (14%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ ++ D+G V D +T+A + AI+++S+ GG ++ +P G + TG+ L + L
Sbjct: 18 TVNVLDYGAVADDDKLDTQAIQKAIDEVSE---KGGGKVVIPKGTYDTGAITLKDNVNLC 74
Query: 176 LH-KDAFLLASQDLNE--WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L K+ L +QD+N +P++ Y Y++ I+ + ++ +TG GT+
Sbjct: 75 LEDKETKLQFTQDINHDNYPLV-----YSHWEGQPMYNYSAFIYAKDAVNIALTG-QGTL 128
Query: 233 DGQ---GALW-W---------------------------QQFHKGKLKYTRPYLMEFMYT 261
DGQ G W W ++ G+ + RP ++ +
Sbjct: 129 DGQAGDGTPWCWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNFIQVIGC 188
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+N+ + +TLL SP W V+PV +N+ V+GI I + N DGI+P+S IED Y
Sbjct: 189 ENVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHI--STKAANNDGIDPESSNYVLIEDNYF 246
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED- 380
+GDDC+A+KSG + G A P++ ++IR + I +GSE+SGG+ +V A++
Sbjct: 247 DTGDDCIAIKSGRNADGRATNTPSQNIIIRN-NIFADGHGGITIGSEVSGGVNNVFADNN 305
Query: 381 -IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF---WMTGNYGSHADNHYDPK 436
+ N + +R KT RGG +++IY+R T+ ++ A M G H D
Sbjct: 306 QFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEEGRHGD------ 359
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+P + I ++ + +E P TG+ + N +
Sbjct: 360 YMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVEL 401
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 92/137 (67%)
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SGWDEYGI YG P+ ++IRR+ + S+ +ALGSEMSGGIQ V A+D++ N+ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IKTA GRGGYV+D+Y+ +TM + TG YG H D+ YDP ALP IQ I ++DI+
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 452 DNVSMAARLEGISGDPF 468
+ A +EGI PF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 139/246 (56%), Gaps = 9/246 (3%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
TK ++ I++ + +Y PA K S L S+ TL K ++AS + +++
Sbjct: 34 TKNLQNQIDKCIANNPTFHISVYFPAEKIEIASLELRSNLTLNFPKGCEIIASANEDDYQ 93
Query: 193 VIKPLPSYGRGRDAAAGR----YTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKL 248
++ LPSY RD A Y S+ +G N+ +V+ TG+ G I+G+G WW + + L
Sbjct: 94 IMPTLPSYCIARDGLAASKDALYRSVFYGENVENVVFTGE-GLINGEGVNWWTR-NSQNL 151
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
K+ RP L + ++ N +I LT NSP W +H VYS NI + + I+A S NTDGI+
Sbjct: 152 KFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDI 211
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
DS +N I D ++ GDD +A+KSG+D G +GMPTK +++ I + A+GSE
Sbjct: 212 DSSSNVHIHDVFVDVGDDVIALKSGFDFCGREFGMPTKNVLVENSVFI---NENFAIGSE 268
Query: 369 MSGGIQ 374
MSGG+Q
Sbjct: 269 MSGGVQ 274
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 190/394 (48%), Gaps = 56/394 (14%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
+ +ITDFG D +T + +AINQ + + S GG + VP G + TG L S+
Sbjct: 46 QTYNITDFGAKPDNET---EPCHEAINQAILKCSLAGGGTVVVPQGTFYTGPITLKSNVN 102
Query: 174 LYLHKDAFL--LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
+L + A L L +Q L VI + G D R LI+ T++ +TG GT
Sbjct: 103 FHLQEGAILKFLTNQSLYFPGVI----TRWEGLDCYNAR--PLIYAYGETNIAITGK-GT 155
Query: 232 IDGQGA--LWW---------------QQFHKGKLKYT--------------------RPY 254
IDGQG+ WW Q + G+ + RP
Sbjct: 156 IDGQGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLRPQ 215
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L+ + I +TLLNSP W +HP++ +++V+G+ I PN DG +P+SC N
Sbjct: 216 LINLYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNV 273
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
IE+C +GDDC+A+KSG + G + +P++ +++R + + + +GSE+SGG +
Sbjct: 274 LIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGG-VVIGSEISGGYR 332
Query: 375 DVRAEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
++ E+ + + N + +RIKT+ RGG +++++VR +T+ + A + N
Sbjct: 333 NLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITVGQCREAV-LRINLQYENREQ 391
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
+ P ++ ++ +++ + + G+ D
Sbjct: 392 CNRGFTPTVRNVHLKNVTCQKSRLGVLIIGLDDD 425
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 58/367 (15%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGG-VGDGKTSNTKAFKDAINQLSQYSSDGGA 152
AE R R S E I+ R + IT FG N +A AI L++ GG
Sbjct: 25 AEYRAIER--SIEQPKIAER--TVVITKFGAKTTASAVQNQQAIHRAIAYLAK---QGGG 77
Query: 153 QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT 212
++ VPAGKW TG+ L S L + KDA L D + +P++K Y+
Sbjct: 78 KVVVPAGKWQTGALRLASGIELVVSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYS 132
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGA--LWW---------------------------QQF 243
I+ DV+V+G+ GTIDG G+ WW QQF
Sbjct: 133 PCIYSYGADDVVVSGE-GTIDGGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQF 191
Query: 244 HKGKLKY----------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
+ + + RP L+ F+ + +++S +TLL+SP W +HP+ N+ V G+
Sbjct: 192 AEDDVPWDERRFGLGQGLRPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVK 251
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I PN DG +P++C N I++ + +GDDC+A+KSG + G + P++ ++IR
Sbjct: 252 IWN--EGPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNC 309
Query: 354 TCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
+ I +GSE+SGG ++V AED + + + + +RIKT RGG +++I +R +
Sbjct: 310 VMEDGHGG-IVIGSEISGGCKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVK 368
Query: 412 MHTMKWA 418
+ K A
Sbjct: 369 VGQCKEA 375
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 171/384 (44%), Gaps = 25/384 (6%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I D G D NT A + AI + G L +PAG W +G L S TL + +
Sbjct: 88 IRDHGARPD-SNDNTTAIQSAIAAVP-----AGGTLRLPAGSWTSGPLFLKSDMTLLIEE 141
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRG----RDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
A L S ++ GR A + SL+ + ++ + G G +DG
Sbjct: 142 GAVLQDSGTREGRRILSSRHPEGRVLGTWEGVAEACFASLLNAIDCDNLTICG-QGIVDG 200
Query: 235 QG--ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
G WW + + RP M ++ I+ +T+ NSPSW VHPV ++L G+
Sbjct: 201 GGDRGDWWTWPKETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAVGL 260
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
TI SPNTDG+NP+S N R+ I GDDCVA+K+G + PT+ + IR
Sbjct: 261 TIRNHPDSPNTDGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEIRN 320
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ A + +GSEMS GI DV T+ G+RIKT GRGG V I V M
Sbjct: 321 CLMQRGHGAVV-MGSEMSQGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCRM 379
Query: 413 HTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDI-VADNVSMAARLE 461
+ + Y AD D ALPV I+GI+ R++ V+ + AA
Sbjct: 380 EDVATPIAVNAFYFCDADGRSDYVQSRTALPVSLTTPKIEGIDIRNLEVSGAETAAAVFY 439
Query: 462 GISGDPFTGICIANATIGMAAKHK 485
G+ + I +I +A K
Sbjct: 440 GLPESTIDAVSIDGMSIAYSADAK 463
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 193/406 (47%), Gaps = 63/406 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG GD KT+NT A +AI + + GG Q+ +P G+++TG+ +L+S+ L+L
Sbjct: 64 NIIDFGANGDNKTNNTVAINNAIKSCN---AQGGGQVIIPQGQFITGAIHLLSNVNLHLE 120
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S ++ LP+ + R Y+ LI+ ++ +TG G ++G
Sbjct: 121 EGAILSFSTSPEDY-----LPAVFTRWEGLEMMGYSPLIYAFEQENIAITG-KGILEGNA 174
Query: 237 --ALWW-----------------------QQFHKGKL------------------KYTRP 253
WW Q+ + KL Y RP
Sbjct: 175 NNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLRP 234
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
++ +N+ I +T+ NSP W V+PV +++ V +T + PN+DG +P+SC +
Sbjct: 235 PFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNH 292
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
I++C +GDDC+A+KSG + G ++ +VI + + +GSE+SGG+
Sbjct: 293 VHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHGG-VVIGSEISGGV 351
Query: 374 QDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN 431
+V ++ + + + E +RIKT RGG ++ I +R + + T+K A + Y
Sbjct: 352 NNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEGDAG 411
Query: 432 HYDPKALPVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANA 476
+D P+++ I ++ NV S A L G + DP I + N+
Sbjct: 412 QFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTNS 453
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 195/418 (46%), Gaps = 68/418 (16%)
Query: 134 KAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPV 193
+A + AI+ ++Q GG ++ +PAG W TG+ L SH L+L A L + N+ V
Sbjct: 83 QAIQQAIDDMAQ---AGGGRVEIPAGIWYTGALELKSHVELHLVAGARLCFIR--NKSNV 137
Query: 194 IKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW----W--------- 240
PL Y R ++ I+ D+ +TG GT+DGQ + W
Sbjct: 138 FYPL-RYTRWEGVECMNFSPFIYAEGAEDISITG-QGTLDGQADEFNWMPWKFGYFGEPD 195
Query: 241 -------------------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHP 281
Q+ + RP ++F + +I+I + ++NSP W ++P
Sbjct: 196 QEEQRQRLFRAGAEGIPVQQRIFADDVSTLRPPFIQFYNSKDIRIMGVHIVNSPFWEINP 255
Query: 282 VYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY 341
V N+ ++G+ I + N DGI+P+S N IEDCY ++GDDC+A+KSG +E G
Sbjct: 256 VLCENVWIKGVHIETDLY--NNDGIDPESSRNVLIEDCYFLTGDDCIAIKSGRNEDGRRI 313
Query: 342 GMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA--EDIKAINTESGVRIKTAVGRG 399
G+PT ++IR + + I LGSE+SGG+ DV A + N + +R KT RG
Sbjct: 314 GVPTANVIIRHNRFANGHGG-ITLGSEISGGVHDVFATGNHFDSPNLDYPIRFKTNAMRG 372
Query: 400 GYVKDIYVRGMTMHTMKWA------FWMTGNYGSH---ADN------------HYDPKAL 438
G ++++YV+ ++ + A F+ G+ G + DN D K
Sbjct: 373 GTLENVYVKDSVVNKARLAVVHADFFYEEGHAGENLPQLDNITLDGFWTAEGGSIDAKYA 432
Query: 439 PVIQGINYRDIVADNVSMA-ARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIG 495
++G + D + +NV+ +LEG+ G+ A A + K+ P D+G
Sbjct: 433 FYLKG--FADALIENVTFRDMKLEGVKGEAVLENIHALAFENVTINGKRQPDRLVDVG 488
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 187/419 (44%), Gaps = 63/419 (15%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
+ + SIT FG DG T NT+A I S+ GG + +P G WLTG L S+
Sbjct: 36 KKDTLSITQFGAKSDGLTLNTEAINKTIEACSK---QGGGVVLIPQGIWLTGPIVLKSNV 92
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
LY+ + A + + D ++P+I+ +Y G+ A R + I GT+L +V +TGD G I
Sbjct: 93 NLYVSRAALIQFTADKTQYPLIE---TYFEGKKAV--RNQAPISGTDLENVAITGD-GVI 146
Query: 233 DGQGALW------------WQQF-------------------------HKGKL------- 248
DG G +W W++ KG
Sbjct: 147 DGNGDIWRMVKKDKVTEGEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDYAAIK 206
Query: 249 KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
Y RP ++ + + + T NSP WN+H +Y + + G+ + ++ N DG++
Sbjct: 207 DYLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDI 266
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
+SC+ +++ + GDD + +KSG DE G G ++ + I + + +GSE
Sbjct: 267 ESCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNVVYKAHGGFV-IGSE 325
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH-----TMKWAFWMTG 423
MSGG D+ + I T+ G+R KT GRGG V++IY++ ++M + + + G
Sbjct: 326 MSGGAHDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRDIVNDAISFDMYYFG 385
Query: 424 NYGSHADNHYD----PKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
S + + P + +IV D S A + G+ I I++ TI
Sbjct: 386 KPVSLGAGKIEIPPVDEGTPQFRKFYISNIVCDGASRAMIIRGLPEMSIKDISISDVTI 444
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 92/137 (67%)
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SGWDEYGI YG P+ ++IRR+ + S+ +ALGSEMSGGI+ V A+DI+ N+ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IKTA GRGGYVKD+Y+ +TM + TG YG H D+ YDP ALP IQ I ++DI+
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 452 DNVSMAARLEGISGDPF 468
D + A + GI PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 184/405 (45%), Gaps = 49/405 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G DG T+AF+ AI + GG +YVPAG++++G L+S+ L++
Sbjct: 25 NIADYGARKDGSALATEAFRSAIQA---AKAAGGGTVYVPAGQYISGPIELVSNLVLHID 81
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID---- 233
A L +P + S GR + A LI G NL +V +TG G +
Sbjct: 82 AGATL-------RFPATRLPFSRGRWQGIEALTPVPLIGGRNLENVSITG-RGVLTTSQP 133
Query: 234 ---------GQGALWWQQFHKGKLK-------YTR------PYLMEFMYTDNIQISSLTL 271
G G W +LK Y + P + M + N+ I + +
Sbjct: 134 EWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFISLMESKNVLIQGIHI 193
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
+ S W + VY N +V G+ ++ +T GI DS N RI DCYI +GDD + +K
Sbjct: 194 VGSAMWPIQLVYDDNAVVSGV-MVETFGGHDTGGIYVDSSRNVRISDCYIDTGDDGIVIK 252
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SG D G P + + I + A + LGSE+SG I+++ A +I T+ GVR
Sbjct: 253 SGKDADGRRVNRPAENISITNCNVHRAHGAVV-LGSEISGWIRNLVASNITCDGTQMGVR 311
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGIN-YRDIV 450
IKT GRGG ++D+ TM + ++ Y +N P PV + + YR+I
Sbjct: 312 IKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNIA 371
Query: 451 -----ADNVSMAARLEGISGDPFTGI----CIANATIGMAAKHKK 486
+N + +EGI P G+ +A A IGM A + K
Sbjct: 372 ISHMTINNSRLVIDIEGIPEMPIDGLRISDIVATAQIGMKAYNTK 416
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 187/422 (44%), Gaps = 68/422 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG DG T NT+A AI + GG ++ +P G WLTG L S+ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNL 112
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ K+A ++ S D + +P+I + G D R S I N ++ +TG G DG
Sbjct: 113 HAEKNALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNAENIAITG-YGVFDG 166
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W+ ++G LK
Sbjct: 167 AGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITS 226
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + + + +T NSPSW +HP+ ++++ + + P S
Sbjct: 227 EEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQ 286
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I +C+ +GDD + +KSG DE G G P + +++R T + +
Sbjct: 287 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGG 346
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + I T+ G+R K+A GRGG V++IY+ + M + +
Sbjct: 347 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 405
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + +P + P + I D+ AA L G+ P I I N
Sbjct: 406 ADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
Query: 477 TI 478
+
Sbjct: 466 VV 467
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 186/404 (46%), Gaps = 57/404 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI FG + +T A + AI + + G + +PAG++LTG+ L S TL+L
Sbjct: 5 SILTFGADPSAERISTTAIQQAIAK-----AKPGDSVVIPAGRYLTGAIFLKSDITLHLV 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ + LL SQ L ++P+I + R A +I N +V +TG GT+DGQG
Sbjct: 60 QGSVLLGSQHLEDYPLIDTRVAGIDMRWPAG-----IINVINAQNVSLTG-TGTLDGQGR 113
Query: 238 LWWQQF-----HKGK--------LKYT------RPYLMEFMYTDNIQISSLTLLNSPSWN 278
+WWQ+F H G L++ RP + + NI + T S WN
Sbjct: 114 IWWQRFWGDDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYESKNILLKDFTSCESGFWN 173
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
VH YS ++ V+ ++II P+TDGI+ DSC RIE C + DD + +K+G
Sbjct: 174 VHLCYSRDVAVENLSIINS-AGPSTDGIDIDSCEQVRIERCTVSCNDDNICIKAGRGREA 232
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ +VIR C+ + I LGSE SGGI+ V E+ + T G RIK+A R
Sbjct: 233 APKARTARAIVIRE--CVLNKGSGITLGSETSGGIEHVLIENNRFNGTGVGFRIKSARNR 290
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGN------YGSHADNHYDPK---------------- 436
GG+++ I VR + + +++ + N YG + P+
Sbjct: 291 GGFIRHITVRNLLLQNVRFPVLIQLNWFPQYSYGDSGNLQDKPEHWRKLADGVEGEAGLT 350
Query: 437 --ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ P + I R ++ S A +EG P G+ + N ++
Sbjct: 351 EVSHPTLSNITARRSDSNLFSRAFFIEGYPDRPVCGLTLDNISV 394
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 187/422 (44%), Gaps = 68/422 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I DFG DG T NT+A AI + GG ++ +P G WLTG L S+ L
Sbjct: 50 YQVNICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNL 106
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ K+A ++ S D + +P+I + G D R S I N ++ +TG G DG
Sbjct: 107 HAEKNALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNAENIAITG-YGVFDG 160
Query: 235 QGALW------------WQQF----------------HKGKLK----------------- 249
G W W+ ++G LK
Sbjct: 161 AGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITS 220
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + + + +T NSPSW +HP+ ++++ + + P S
Sbjct: 221 EEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQ 280
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I +C+ +GDD + +KSG DE G G P + +++R T + +
Sbjct: 281 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGG 340
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWM 421
+ +GSEMSGG+++V + I T+ G+R K+A GRGG V++IY+ + M + +
Sbjct: 341 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 399
Query: 422 TGNYGSHADNHYDP-----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
Y + +P + P + I D+ AA L G+ P I I N
Sbjct: 400 ADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 459
Query: 477 TI 478
+
Sbjct: 460 VV 461
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 175/364 (48%), Gaps = 31/364 (8%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDG +T A + AI + ++ +PAG++ L L L
Sbjct: 83 NVRDFGAAGDGIKDDTLAIQSAI-----MACPPQGRVLIPAGRYSFVCLFLKDGINLELE 137
Query: 178 KDAFLLASQDLNEWPVIKPLPSY---------GRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
K A L A D +P + Y G + LI G ++ +V + G+
Sbjct: 138 KGAELSAVTDRERFPFYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVHVKNVNIYGE 197
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
GT++G + WW + K+ + RP + +NI + LT+ NSPSW +HP +S++
Sbjct: 198 -GTLNGNASHENWWHNCKEMKIAW-RPRAVFLNGCENISLVGLTVKNSPSWTIHPYFSNH 255
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ G+ ++AP S NTDG++P+SC + + GDDC+AVKSG G Y P++
Sbjct: 256 LRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPSE 315
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG--YVKD 404
+ IR+ + ++ ++ +GSE+ G++D+ D +T+ G+RIKT GRG V
Sbjct: 316 HITIRQCS-MNDGHGSVVIGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRGRGEDCVVDR 374
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALPV------IQGINYRDIVADNV 454
+ + M + F + Y D + + LPV IQ ++++DI A+N
Sbjct: 375 VAFENIRMDGVLTPFVVNCFYFCDPDGRTEYVQSKEPLPVDERTPSIQELSFKDIHAENA 434
Query: 455 SMAA 458
AA
Sbjct: 435 HYAA 438
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 187/388 (48%), Gaps = 58/388 (14%)
Query: 150 GGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAA 208
GG ++ VP G++ TG+ +L S+ L++ + A L SQD ++ P++ + R
Sbjct: 92 GGGKVVVPPGEYRTGAIHLRSNIELHVSRGATLRFSQDPADYLPMV-----HTRWEGIEL 146
Query: 209 GRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW-------------QQFHKGKLKYT-- 251
Y+ ++ + DV +TG+ G +DGQ WW + H+ L
Sbjct: 147 YNYSPFVYAYGVHDVAITGE-GVLDGQADPEHWWPWKTEPDGHGGVVETEHRNALHAMAE 205
Query: 252 ---------------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
RP ++F + I +S +TL NSP W +HPV S N+LV G+T+ +
Sbjct: 206 QGVPVAQRRFADSKLRPNFVQFYRSSTILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDS 265
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P PN+DG+NP+S N I + +GDDC+AVKSG + G G+P++ +VI
Sbjct: 266 P-DGPNSDGVNPESSRNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMF 324
Query: 357 SPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
+ + + +GSEMSG +++V AE + + + + +RIKT RGG V+ +Y R +
Sbjct: 325 AGHGGVV-IGSEMSGDVRNVFAERNVMNSPHLDRALRIKTNSVRGGTVEGVYFRDNDVPA 383
Query: 415 MKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
+ A + N+ HY+ + P ++GI+ ++ + A L G P T
Sbjct: 384 VADAV-IRINF------HYEEGDVGDFTPTVRGIHIDNVHSVGGEFALYLRGYERSPITD 436
Query: 471 ICIANATIGMAAKHKKVPWTCADIGGMT 498
I I ++T A P + G+T
Sbjct: 437 ITIRDSTFSEAT----TPMLLEHVRGLT 460
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 181/397 (45%), Gaps = 38/397 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+T FG GDG T +T A + AI + DG +Y+P G++L L S TL+L K
Sbjct: 83 VTAFGAKGDGVTMDTAAIQAAICACPK---DG--TVYLPKGEYLVTPLFLKSDMTLWLDK 137
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAA------------GRYTSLIFGTNLTDVIVT 226
A +L D N +PV LP R D + Y SLI + ++ +
Sbjct: 138 GAVILGDTDRNHYPV---LPGMTRATDEKSEYNLGTWEGNPLNCYASLITAIDAQNLDII 194
Query: 227 GDNGTIDGQG--ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
G GTIDG + WW K K RP+ M + +++ ++ + NSP W VHP YS
Sbjct: 195 GP-GTIDGNAGNSDWWVN-AKVKRGAWRPFAMYLVRCQKVRVQNVRVQNSPCWTVHPYYS 252
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
++ + I P SPNTDG++P+SC N + I GDDC+A+KSG + +
Sbjct: 253 DDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDCMAIKSGKFYMSMEHHKV 312
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYV 402
T+ ++IR ++ +GSE++GG+++VR T+ G+RIKT GRG +
Sbjct: 313 TENIIIRNCR-FERGHGSVTVGSEVAGGVKNVRVTQCIFDGTDRGLRIKTRRGRGERSVL 371
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVAD 452
DI + M+ + F + Y D H D + P I I R+I
Sbjct: 372 DDILFENIDMNGVHMPFTVNMFYFCDPDGHTDYVQNQEPAPVDEMTPAIGSITGRNIECK 431
Query: 453 NVSMAARLE-GISGDPFTGICIANATIGMAAKHKKVP 488
S + G+ P + N ++++VP
Sbjct: 432 GASASIVCAVGLPERPIEKLVFENINASFLPENERVP 468
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 187/411 (45%), Gaps = 72/411 (17%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ +I DFG V G NTKAF DAI+ +S+ GG ++ +P G WLTG L S+ L
Sbjct: 53 NTVNIKDFGAVNGGYVLNTKAFADAIDAVSK---KGGGKVVIPPGIWLTGPIILKSNLEL 109
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ A + S D + +P+++ S+ R S I+G NL ++ TG G DG
Sbjct: 110 HAETGALIKFSTDKSLYPLVET--SF---EGLNTWRCISPIYGKNLENIAFTGK-GVWDG 163
Query: 235 QGALW------------WQQF--HKGKLK------------------------------- 249
G +W W++F G L
Sbjct: 164 SGEVWRQVKKSKLTESQWKKFVASGGVLNEKKESWYPSETFMKASVGADQNVRLDLKTKE 223
Query: 250 -------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPN 302
+ RP L+ + + NSP+WN+HP+ +++V+ +T+ P S N
Sbjct: 224 EFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQN 283
Query: 303 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG++ +SC N +E+ GDD + +KSG D+ G G+P + ++++ +
Sbjct: 284 GDGLDVESCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHGG- 342
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWM 421
+ +GSEMSGG++++ + + T+ G+R K+ GRGG V++I++ + M + A
Sbjct: 343 VTVGSEMSGGVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISF 402
Query: 422 TGNYG--------SHADNHYDPKALPVIQGI-NYRDIVADNVSMAARLEGI 463
YG + N K +PV + +++I NV++A + +
Sbjct: 403 DLYYGGKSIAETLAEGGNTVSSKKVPVDEKTPQFKNISIKNVTIAGAQQAV 453
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 118/197 (59%), Gaps = 9/197 (4%)
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGR----YTSLIFGTNLTDVIVTGDNGTIDGQGA 237
++AS + +++ ++ LPSY RD A Y S+ +G + +V+ TG+ G I+G+G
Sbjct: 9 IIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTGE-GLINGEGE 67
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
WW + + LK+ RP L + ++ N +I LT NSP W +H VYS NI + + I+A
Sbjct: 68 NWWTR-NSQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVAILAE 126
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
S NTDGI+ DS +N I D +I GDD +A+KSG+D G +GMPTK +++ I+
Sbjct: 127 HESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVENSVFIN 186
Query: 358 PYSATIALGSEMSGGIQ 374
A+GSEMSGG+Q
Sbjct: 187 E---NFAIGSEMSGGVQ 200
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 202/431 (46%), Gaps = 67/431 (15%)
Query: 111 SCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLIS 170
S A+ SI ++GG GDG T NT+AF AI++L++ GG L VPAG +LTG +L
Sbjct: 40 SIPANHVSILEYGGNGDGLTMNTQAFAKAISKLNKM---GGGHLNVPAGIYLTGLISLKD 96
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
+ L+L K+A ++ S+D N+ K + G+ R T I + ++ +TG+ G
Sbjct: 97 NIDLHLEKNAIIVLSEDKNDH--FKIDKTTGK----KESRATPAINASKRKNISITGE-G 149
Query: 231 TIDGQGALW------------WQQFH--------KGKLKY-------------------T 251
TIDG G W W++F KG + Y
Sbjct: 150 TIDGNGEWWRPVKRSKVSDVEWKEFQTMGGTLNEKGDIWYPFNLKHKPNVAENMDEQEKN 209
Query: 252 RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSC 311
R +++ F +N+ + +TLLNSP +++ P N+++ GIT+ P + N D I+ SC
Sbjct: 210 RTHMIRFTSCENVLVQGVTLLNSPKFHIIPTRCKNVIIDGITVKCPWNAQNGDAIDISSC 269
Query: 312 TNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSG 371
+ I + I +GDD + +K G P + + I+ T + + +GSE SG
Sbjct: 270 KDVLIVNNVIDAGDDGICMKGG-AGAAGVAAGPCENINIQDNTVYHAHGGFV-IGSEFSG 327
Query: 372 GIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA---FWMTGNYGSH 428
G++++ + T++G+R K+AV RGG ++IY+ + M +K A F T +
Sbjct: 328 GMKNIVVRNNTFQGTDTGLRFKSAVKRGGTSENIYIDHIYMTDIKDAAITFETT-----Y 382
Query: 429 ADNHY--DPKALPVIQGI--NYRDIVADNVSMAARLEGISGDPFTG----ICIANATIGM 480
DNH + PV Q N++DI N+ + GI G I I N+ I
Sbjct: 383 FDNHVGAQKQTTPVKQEFLPNFQDIHMSNIYVRGCETGIEAHGAEGMVHDITIKNSNIFY 442
Query: 481 AAKHKKVPWTC 491
+ K + C
Sbjct: 443 TKEAKNIDAVC 453
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 157/342 (45%), Gaps = 31/342 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ FG +GDGK +T + AI + DG + +P G++LT L S +L+L +
Sbjct: 86 VRAFGALGDGKNDDTACIQAAIEACPK---DGTVR--IPKGRYLTRPLFLRSGLSLWLDR 140
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAG------------RYTSLIFGTNLTDVIVT 226
A LL +P LP D G Y SL+ G L +V +
Sbjct: 141 GAVLLGDPSREHYPR---LPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRNVDIF 197
Query: 227 GDNGTIDGQG--ALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
G+ GT+DG + WW++ HK K RP + I+I + + NSPSW +HP Y+
Sbjct: 198 GE-GTVDGNADRSDWWEE-HKTKRGAWRPRTIFLCRCRCIRIQGVLVRNSPSWTIHPYYT 255
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
I + +TI P SPNTDG +P+SC + + C I GDDC+A+KSG
Sbjct: 256 DGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKARMAGERRKA 315
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYV 402
++ +R + + + +GSE + G+ V A T+ G+R+KT GRG +
Sbjct: 316 SRNFALRN-SILERGHGALTIGSEAAAGVYRVEASLCIFSGTDRGLRLKTRRGRGPDCFY 374
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYGSHADNH----YDPKALPV 440
+IY + M + F Y AD H +ALPV
Sbjct: 375 DEIYFHHIRMENVPMPFTFNMFYHCDADGHERYVQSQEALPV 416
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 185/415 (44%), Gaps = 72/415 (17%)
Query: 111 SCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLIS 170
S + S IT +G V DG+ NT+A AI+ ++ + VPAG W TG L S
Sbjct: 32 SFKKDSTWITKYGAVADGQMLNTQAINAAIDACNKKGG---GVVVVPAGLWATGPITLKS 88
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
+ L+L K A L ++D N++ +++ G R S + TN T++ +TG G
Sbjct: 89 NVNLHLKKGAVLQFTKDFNQYQLVE-----GNWEGIPQMRNQSPVSATNATNIAITG-FG 142
Query: 231 TIDGQGALWWQ------------------------------------------------- 241
IDG G W Q
Sbjct: 143 VIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDGKSWYPSEQWLKAAKMKNPGEFTPD 202
Query: 242 ---QFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
+F+K + RP L+ + + +T NS +W +HP+ S ++ V+ +T+ P
Sbjct: 203 KTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNSAAWCLHPLMSEDLTVRNVTVKNPW 262
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
+ N DGI+ +SC IE+ GDD + +KSG DE G GMPT+ ++IR
Sbjct: 263 FAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCKVYHA 322
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+ + +GSEMSGG +++ + I T+ G+R KT GRGG V++IY + M +
Sbjct: 323 HGGFV-IGSEMSGGARNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQMIDIPGE 381
Query: 419 ------FWMTGNYGSHADNHYD-PKA--LPVIQGI-NYRDIVADNVSMAARLEGI 463
++M+ + + A + PK LPV +G +R+ V NV +GI
Sbjct: 382 AILFDMYYMSVDPVALAGEKRELPKVEKLPVDEGTPQFRNFVVKNVVCNGAAKGI 436
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 163/327 (49%), Gaps = 33/327 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DF V D + +T+A + AI+ ++ G + +PAG++LTG+ L S TL L
Sbjct: 5 NIIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLELA 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
KDA LL SQ L ++P I + G D + + + N + +GT+DGQGA
Sbjct: 60 KDAVLLGSQQLEDYPEIATRVA---GIDMV---WPTAMLNINQCRNVTVCGSGTLDGQGA 113
Query: 238 LWWQQF-----HKGKL-KYTR-------------PYLMEFMYTDNIQISSLTLLNSPSWN 278
+WW +F + G L YTR P + ++ + + T +S WN
Sbjct: 114 VWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWN 173
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+H YS + +Q + ++ T +TDGI+ DS R+E C + DD + VKSG
Sbjct: 174 LHVCYSKQVNLQRLNVM-NATGTSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEA 232
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ ++IR T + + I LGSE SGGI++V E + T G RIK+A R
Sbjct: 233 QQLARTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GG++K+I VR + M + + F + N+
Sbjct: 291 GGWIKNIIVRHLIMEDVGYPFMLQLNW 317
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 194/433 (44%), Gaps = 79/433 (18%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +I +G DG T NT A AI+ + GG + +PAG W+TG L S+
Sbjct: 264 RKDTFNIVRYGAKADGFTVNTTAIAQAIDLAHEA---GGGTVLIPAGVWVTGPLKLKSNV 320
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L K A L S + +++P+++ + G+ A R + I+ ++ +TG G +
Sbjct: 321 NLHLQKGALLQFSNNRDDYPIVE---TTWEGQKAL--RCHAPIWAVGQVNIAITG-QGIM 374
Query: 233 DGQGAL----------------------------------------------WWQQFHKG 246
DG G + W + +G
Sbjct: 375 DGSGEVWKQVKKNKLTSTQWRKLVESGGVVGKKGDAWYPSEQSRYGNEDVRDWANLWVEG 434
Query: 247 KL--------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
K + RP ++ +N+ I +T NSP+W +HP+ S +I ++ + + P
Sbjct: 435 KTLEDYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNPW 494
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
N D ++ +SC+ ++ C +GDD + +KSG DE G G+PT+ ++I+ T
Sbjct: 495 FGQNNDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTVFHG 554
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+ + +GSEMSGG+++V ++ + T+ G+R KT RGG V++IY+ + M+ +
Sbjct: 555 HGGFV-IGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNIPGE 613
Query: 419 FWMTGNYGSHADN---HYDPKALPVI--QGIN----------YRDIVADNVSMAARLEGI 463
+ Y D D ALPVI Q +N +++V+ A L G+
Sbjct: 614 AILFDMYYEAKDPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVSAIVLRGL 673
Query: 464 SGDPFTGICIANA 476
P GI I ++
Sbjct: 674 PEMPIRGIKIEDS 686
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 193/406 (47%), Gaps = 63/406 (15%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG G+ KT+NT A +AI + + GG Q+ +P G+++TG+ +L+S+ L+L
Sbjct: 64 NIIDFGANGNNKTNNTVAINNAIKSCN---AQGGGQVIIPQGQFITGAIHLLSNVNLHLE 120
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S ++ LP+ + R Y+ LI+ ++ +TG G ++G
Sbjct: 121 EGAILSFSTSPEDY-----LPAVFTRWEGLEMMGYSPLIYAFEQENIAITGK-GILEGNA 174
Query: 237 --ALWW-----------------------QQFHKGKL------------------KYTRP 253
WW Q+ + KL Y RP
Sbjct: 175 NNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLRP 234
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
++ +N+ I +T+ NSP W V+PV +++ V +T + PN+DG +P+SC +
Sbjct: 235 PFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNH 292
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
I++C +GDDC+A+KSG + G ++ +VI + + +GSE+SGG+
Sbjct: 293 VHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHGG-VVIGSEISGGV 351
Query: 374 QDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN 431
+V ++ + + + E +RIKT RGG ++ I +R + + T+K A + Y
Sbjct: 352 NNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEGDAG 411
Query: 432 HYDPKALPVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANA 476
+D P+++ I ++ NV S A L G + DP I + N+
Sbjct: 412 QFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTNS 453
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 175/385 (45%), Gaps = 56/385 (14%)
Query: 135 AFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVI 194
+ ++AI+ L++ DG L +P G TG LIS T+ L K A L D + +
Sbjct: 15 SIQEAIDHLAK--CDGARVLTIPKGTTETGPLELISDLTIILEKGAVLKFKDDPH---LY 69
Query: 195 KPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFH---------- 244
KP+ + G + A L++ + ++ + G+ G IDG GA WW+ F
Sbjct: 70 KPIWTRWEGIECHA--MHPLLYAADCHNITIDGE-GIIDGNGAWWWRTFAQIERTDRTQP 126
Query: 245 -----------------------KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHP 281
+ ++ RP L++F +++ +T+ NSP W +H
Sbjct: 127 QEDYELELARLNPDYKERAGGGARPSTQFLRPPLIQFWKCTAVKLKGITVQNSPFWTIHF 186
Query: 282 VYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY 341
VY + + + G+T+ P + NTD ++ DS TN + + GDD + +KSG G+
Sbjct: 187 VYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGDDAITLKSGSGPDGLRV 246
Query: 342 GMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
PT + ++ T ++ + IA+GSE +GGI DV E T+ G+R+K+ GRGG
Sbjct: 247 NKPTAHVNVKDCTILASHGG-IAIGSETAGGINDVNVEKCTFSGTQRGIRLKSRRGRGGT 305
Query: 402 VKDIYVRGMTMHTMKWA------FWMTGNYGSHADNHYDPKALPV------IQGINYRDI 449
+K I +R + M W ++ G D A PV I+ I D+
Sbjct: 306 IKGITLRHLEMDHC-WCPIVLGMYFAPGVLPQEEDYVLSKSAQPVEATTPHIRNIRIEDV 364
Query: 450 VADNV-SMAARLEGISGDPFTGICI 473
ADNV S AA + G+ P + I
Sbjct: 365 RADNVRSTAAFIVGLPESPIENVSI 389
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 178/344 (51%), Gaps = 33/344 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ DFGG+GDGKT NT+A + AI++ ++ +GG + G +L+GS + + + K
Sbjct: 85 VNDFGGIGDGKTINTEAIQKAIDKCAE---NGGGTIAFKPGTYLSGSIFIKKNIHFKIGK 141
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+ +L SQD+N++ I + + AA LI +N +VI+ G+ G IDGQG +
Sbjct: 142 NVTILGSQDINDYKEIDTRVAGIEMKWPAA-----LINVSNQENVIIDGE-GLIDGQGKV 195
Query: 239 WW--------QQFHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
+W ++ L++ RP + + NI + L + + W VH +YS
Sbjct: 196 FWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILISDSKNIALKDLNIQKAGFWTVHVLYS 255
Query: 285 SNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
I V G+ I + P+TDGI+ DS I++C I DD +K+G D G
Sbjct: 256 EKITVDGLIIKNNIGGHGPSTDGIDIDSSKWVLIQNCDIDCNDDNFCLKAGRDWDGQRVN 315
Query: 343 MPTKQLVIRRLTCISPYSATI-ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
PT+ +VIR CI+ A + LGSE +G I+ V +IK + T +G+ IK+A+ RGG
Sbjct: 316 RPTEYVVIR--NCIARKGAGLFTLGSETAGSIRHVYVSNIKGLGTSNGLNIKSALTRGGT 373
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKALPV 440
V+DI ++ + M ++K ++ N+ S YD ++P+
Sbjct: 374 VEDISLQNIQMDSVKTFVKISMNWNPSYSYSKLPEGYDIDSIPI 417
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 197/408 (48%), Gaps = 64/408 (15%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ SIT+ G + +++A + I ++ S GG + VPAG++ TG +L S+
Sbjct: 58 YAMSITELGAKPGFENDSSEAIRQTI---AKVVSAGGGTVVVPAGEFYTGPVHLESNINF 114
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
++ K A L + + KP + R + LI+ T+V +TG G ++G
Sbjct: 115 HIAKGAVLHFYPEPERY---KPY-VFTRWEGTELMGLSPLIYAYKKTNVAITGK-GILEG 169
Query: 235 QGAL--WW------------------QQFHKGKLK-----------------YTRPYLME 257
G+ WW Q+F + L+ Y RP ++
Sbjct: 170 GGSEQHWWPWKGPWKKSTWGDDPIENQKFTRDVLREMAEQELPVAQRVFKNNYLRPPFIQ 229
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
N+ I +T+ NSP W V+PV N+ V+ I + PN+DG +P++CT+ IE
Sbjct: 230 PYACINVLIEGVTIKNSPFWLVNPVLCKNVTVRNIHCDS--HGPNSDGCDPEACTDVLIE 287
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
+C +GDDC+A+KSG + G G P + ++I S + + +GSE+SGG++++
Sbjct: 288 NCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHGGVV-IGSEISGGVRNLY 346
Query: 378 AE--DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHAD 430
A+ ++ + + + G+RIKT RGG++K++ R + + +K A ++ G+ G
Sbjct: 347 AQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYYEEGDVG---- 402
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
K PV++ IN ++ ++ + A L G P TG+ I N TI
Sbjct: 403 -----KFTPVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTI 445
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 55/388 (14%)
Query: 138 DAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL 197
+A+ L +S G L + G +LT L + + + A L + D + PVI P
Sbjct: 22 EALQALIDETSQAGGILVLEKGTYLTAPLFLKNGMEFHFEEGAVLKGTTDETKIPVI-PT 80
Query: 198 PSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFH 244
+ G G D Y ++ DVI++G NGTIDGQG WW+ ++
Sbjct: 81 RAAGIGMDW----YPGVLNCNGQKDVIISG-NGTIDGQGEYWWRKYWGDDGKSGMRGEYD 135
Query: 245 KGKLKYTRPY------LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA-P 297
K L++ Y + M + I + +T + S WN+H YS +I V GI I +
Sbjct: 136 KKGLRWACDYDCMRVRNVVIMESSRITLKDITSMRSGFWNIHICYSDHIHVDGIKIASCG 195
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
SP+TDGI+ DSC + +E+C DD + +KSG D GI P + ++ +
Sbjct: 196 GESPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQNCEIRA 255
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ TI GSE+SGG+ + ++++ T+ G RIK++V R GY++D+ V G++M +K+
Sbjct: 256 GFGVTI--GSEVSGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKY 313
Query: 418 AF-----W--------MTGNYGSHADNHYD------PKALP--VIQGINYRDIVADN--- 453
F W + G+Y H+ P ++P + I ++ A N
Sbjct: 314 PFHFFLNWNPAYSYCELPGDYEGEIPEHWKKLLEAIPDSVPKTKVSNITIENVTARNEAD 373
Query: 454 ---VSMAARLEGISGDPFTGICIANATI 478
+S A +EG P + N ++
Sbjct: 374 YNGISRAFHIEGFEDQPVEHVIFKNVSL 401
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 68/426 (15%)
Query: 80 VPLL---IVVALLSQRGAESRKARRLDSFEYNAISCR-------AHSASITDFGGVGDGK 129
+PLL I +A S R AE +++ E AI + A SITDFG +
Sbjct: 8 IPLLLGAIAIAACSCRAAE------IETSESQAILAQIRSPEFPARDFSITDFGASPNAD 61
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL-LASQDL 188
+ T+A AI + + GG ++ +PAG WLTG+ +L+ + L+L K+A L +
Sbjct: 62 S--TEAIAKAI---TACHAAGGGRVTIPAGVWLTGAVHLLGNVDLHLAKEATLRFVPEPA 116
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WW------ 240
PV+ R Y+ L++ +V +TG GT+DG + WW
Sbjct: 117 KYLPVV-----LTRYEGIECMNYSPLVYAFEQENVAITG-AGTLDGSASSQNWWAWNERA 170
Query: 241 -----------QQFHK-------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPS 276
+Q + G + RP +E N+ I +T++NSP
Sbjct: 171 PDKPALQAADRKQLDQQGADGTPVAQRIFGAGHFLRPSFIEPYRCKNVLIEGVTIVNSPM 230
Query: 277 WNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
W +HP +N+ V+G+T+ + T N DG +P+SC + IEDC +GDDC+A+KSG +
Sbjct: 231 WEIHPTLCTNVTVRGVTVHSLGT--NNDGCDPESCHDVLIEDCTFQTGDDCIAIKSGRNN 288
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINTESGVRIKT 394
G G+ + ++IRR T + + +GSE+SGG+++V D + + + R K+
Sbjct: 289 DGRRVGVAAENIIIRRCTMKDGHGG-VTIGSEVSGGVRNVFVSDCQMDSPRLDRAFRFKS 347
Query: 395 AVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNV 454
RGG +++I V + + + A ++ + H + PV++ + ++ A++
Sbjct: 348 NAVRGGEIENIQVSQVKIGRVARAV-LSVEFDYEEGAHGPER--PVLRHVRIENVTAESC 404
Query: 455 SMAARL 460
A +
Sbjct: 405 GSVATI 410
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 189/408 (46%), Gaps = 59/408 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG G+ +++AF A ++ + GG ++ VP G WLTG +L S+ L++ K
Sbjct: 50 ITDFGADGEAVADSSEAFARA---IAACHAAGGGRVVVPPGWWLTGPIHLKSNVNLHVQK 106
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A +L D + P++ + R Y+ ++ ++ VTG+ G +DGQ +
Sbjct: 107 GATILFKTDPKAYLPLV-----FTRWEGVELMNYSPFVYAFEQENIAVTGE-GVLDGQCS 160
Query: 238 L--WW-------------------------------------QQFHKGKLKYTRPYLMEF 258
WW +Q G+ Y RP ++
Sbjct: 161 REHWWTWKGPWKQNQHGWAEGMPNQRPARARLFQMAEDRTPVEQRVFGEGSYLRPPFIQP 220
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
N+ I ++L SP W VHPV N+ ++ + I + PN DGI+P+SC + IED
Sbjct: 221 YRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINS--HGPNNDGIDPESCDHVLIED 278
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C+ +GDDC+A+ SG +E G G+P + +VIR + + +GS++SG +++V A
Sbjct: 279 CFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCRMADGHGG-LTIGSQISGHVRNVFA 337
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG-NYGSHADNHYDP 435
E+ + + + + +R K RGG V+ + R + + ++ A NY A+ +
Sbjct: 338 ENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAVVTVDFNYEEGANGRFK- 396
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
PV++ + ++ + A L+G+ G P I I + A+
Sbjct: 397 ---PVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVAE 441
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 145/275 (52%), Gaps = 19/275 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDG ++ + A+N + DG +Y+P G++L L S+ L++
Sbjct: 84 NVKDFGAAGDGVKIDSVCIQAAVNACPK---DG--TVYIPKGRYLCTPVFLKSNIDLWID 138
Query: 178 KDAFLLASQDLNEWPVI---------KPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
KDA L+ +D ++P++ K + G + +LI G ++ +V++ G+
Sbjct: 139 KDAVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYGE 198
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G +DG + WW+ K + + RP + NI + L ++NSPSW +HP YS N
Sbjct: 199 -GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSDN 256
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+L TI+ P SPNTDG++P+SC N I I GDDC+A+KSG + + P K
Sbjct: 257 LLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPAK 316
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDI 381
+VIR + ++ +GSE++ G+ DV E++
Sbjct: 317 NIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVENV 350
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 186/387 (48%), Gaps = 50/387 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG D T ++ ++ + S +GG + VP G + TG L S+ ++ +
Sbjct: 71 ITDFGAKPD--TPDSPCHEEINRAIVTCSLNGGGTVIVPKGTFYTGPITLKSNVNFHVEE 128
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA- 237
A L S D + + + + G D R LI+ T++ +TG GTIDGQG+
Sbjct: 129 GATLKFSTDQSLY--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGSK 183
Query: 238 -LWW---------------QQFHKGKLKYT--------------------RPYLMEFMYT 261
WW Q + G+ + RP L+
Sbjct: 184 ETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLRPQLVNLYSC 243
Query: 262 DNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYI 321
+ + I +TLLNSP W +HP++ ++ V+G+ + PN DG +P+SC N IE+C
Sbjct: 244 NTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFN--RGPNGDGCDPESCKNVLIENCTF 301
Query: 322 VSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDI 381
+GDDC+A+KSG + G + +P++ +++R + + + +GSE+SGG +++ E+
Sbjct: 302 DTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGHGG-VVIGSEISGGYRNLYVENC 360
Query: 382 K--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALP 439
+ + N + +RIKT+ RGG +++++VR +T+ + A + N D P
Sbjct: 361 QMDSPNLDRVIRIKTSTCRGGIIENVFVRNVTVGQCREAV-LRINLQYENREKCDRSFPP 419
Query: 440 VIQGINYRDIVADNVSMAARLEGISGD 466
V++ ++ +++ + + + G+ D
Sbjct: 420 VVRNVHLKNVTCEKSKLGILIIGLDDD 446
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 180/412 (43%), Gaps = 63/412 (15%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A IT FG DGKT T A + AI++ ++ GG ++ G +LTG+ +L S+
Sbjct: 48 AKQFEITRFGARADGKTDCTDAIRKAIDEAARV---GGGRVMAREGAFLTGAIHLKSNVN 104
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L + K A L S D +P++ R Y+ I+ N ++ +TG GT+D
Sbjct: 105 LVVEKGATLRFSPDPKLYPIV-----LTRFEGLECMNYSPFIYAFNQQNIAITG-GGTLD 158
Query: 234 GQ--GALWWQQFHK--------------------------------GKLKYTRPYLMEFM 259
GQ G WW K G + RP ++
Sbjct: 159 GQASGEHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFGDGAWLRPMFIQPY 218
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
N+QI +T+ NSP + +HPV N++ + + + + PN DG +P+S + I+ C
Sbjct: 219 RCTNVQIEDVTITNSPMYEMHPVLCRNVIARNVKVSS--HGPNNDGCDPESSVDVLIDGC 276
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+GDDC+A+KSG + G P++ L+++ + + +GSE SGGI++V A+
Sbjct: 277 TFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKDGHGG-VTMGSECSGGIRNVFAQ 335
Query: 380 DIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA------FWMTGNYGSHADN 431
D + + N +R K RGG ++ +Y+R + + A ++ G GS
Sbjct: 336 DCQMDSPNLNVALRFKNNAVRGGVIEHVYMRNVKAGQVAQAAIDVDFYYEEGEKGSFT-- 393
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
PV++ + ++ + L G P I I N T A K
Sbjct: 394 -------PVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTFAGATK 438
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 161/348 (46%), Gaps = 63/348 (18%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
SI DFG VGDG T N++AF AI+ +S+ GG ++ VP G WLTG + S+ L++
Sbjct: 63 VSIVDFGAVGDGVTDNSEAFAKAIDYVSE---KGGGRVIVPRGIWLTGPIIMKSNIDLHV 119
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A + S D ++P+I+ + R S I NL ++ TG G DG G
Sbjct: 120 QQGAVVRFSPDFEDYPLIETI-----FEGLNTFRCMSPIHAHNLENIAFTG-KGIFDGNG 173
Query: 237 ALW------------WQQ----------------------------------------FH 244
W W++ F
Sbjct: 174 DAWRPVKKSKLTESQWKKLVNSGGVLSDDGQIWYPSEKSKAGDSRDNFNVPDLERKEDFE 233
Query: 245 KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
K K + RP ++ + + T NSP+WN+HP+ ++ ++ +T+ P S N D
Sbjct: 234 KIK-DFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGD 292
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIA 364
G++ +SC N I + GDD + KSG DE G +PT+ +V++ + +
Sbjct: 293 GLDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGHGGFV- 351
Query: 365 LGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+GSEMSGG+++V + I T+ G+R K+ GRGG V++IY+ + M
Sbjct: 352 IGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDM 399
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 176/368 (47%), Gaps = 48/368 (13%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHF 172
A + +TD+G VGDG T A + A+ + + GG ++ +P G W + G L SH
Sbjct: 51 ARTVDVTDYGAVGDGSTDARPAIEAALADMERA---GGGRVVLPPGTWFSAGPIRLRSHV 107
Query: 173 TLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
L++ A L S+D ++ PV+ PS G + Y+ L+ + DV VTG G
Sbjct: 108 DLHVSSGATLRFSEDPADYLPVV---PSRWEGTEMFG--YSPLLHAHRVHDVAVTG-GGL 161
Query: 232 IDGQ---GALWWQQFHK---------------------GKLKYTRPYLMEFMYTDNIQIS 267
IDG G W++ G+ Y RP +++F + ++ +
Sbjct: 162 IDGNAEDGFAAWRELQGEDQQALRRMGKEGVPVEERVFGEGHYLRPSMLQFYESSDVLVE 221
Query: 268 SLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC-YIVSGDD 326
+T++++P W H +YS +I V+ +T+ PN DG+ DS ++ +E+ + GDD
Sbjct: 222 GVTIVDAPMWVNHFIYSDDITVRDVTV--KTHRPNNDGVAIDSSSDVLVENNDFQGIGDD 279
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
CV VKSG DE G G P++ +V+R +S A+GSEMSGG+ V E
Sbjct: 280 CVVVKSGRDEDGRRVGRPSENIVVRG-NRMSGTEGGFAIGSEMSGGVNTVFVERNTMDTI 338
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
S + IK + RGG V+ + +R +T+ T + +Y + ++ P +
Sbjct: 339 GSALYIKANLDRGGVVERVRIRDITVGTAEKVLRFQTDYSGYQGGNHPPA---------F 389
Query: 447 RDIVADNV 454
RD V +NV
Sbjct: 390 RDFVVENV 397
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 169/339 (49%), Gaps = 54/339 (15%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + A GG GD A AI + + GG + VPAG + TG +L+S+
Sbjct: 63 REYGAEEGVVGGAGD-------AIAKAIEACN---AGGGGTVLVPAGTYHTGPVHLLSNV 112
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
L++ + A L S + ++ LP+ + R Y+ LI+ T++ VTG GT
Sbjct: 113 NLHVAEGATLKFSTEAKDY-----LPAVFTRWEGVECYNYSPLIYAFEQTNIAVTG-KGT 166
Query: 232 IDGQGAL--WWQQFHK------------------------------GKLKYTRPYLMEFM 259
+DGQ +L W K G+ + RP ++
Sbjct: 167 LDGQASLDNWLDWNVKSAPGGSKQIPARNRLIEYGAKGTPVDERVFGEGDFLRPNFLQPY 226
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
DN+ I +T++NSP W +HPV S N+ V+G+T+++ N DG NP+S + IE+C
Sbjct: 227 RCDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS--HGSNNDGCNPESSKDVLIENC 284
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+GDDC+A+KSG + G +P++ +++R + + +GSE+SGG+++V E
Sbjct: 285 VFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMKDGHGGVV-IGSEISGGVRNVFVE 343
Query: 380 --DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
++ + N + +RIKT RGG +++++VR + + +K
Sbjct: 344 NCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVK 382
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 182/394 (46%), Gaps = 46/394 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL-TGSFNLISHFTLYL 176
S+ FG GDGK AF A+ + + GGA + VPAG++L G + +S+ L L
Sbjct: 30 SLISFGAKGDGKKDCKPAFDKAMKRAAHM---GGAHIVVPAGEYLLNGPIHFVSNVCLEL 86
Query: 177 HKDAFL-LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ A L +S+ P++K Y+ I+G L +V + G G IDG
Sbjct: 87 QEGATLKFSSEPAFYLPLVKT-----SWEGTFLQNYSPFIYGYQLENVSIIG-KGVIDGN 140
Query: 236 G----ALW------WQQF-----HK---------GKLKYTRPYLMEFMYTDNIQISSLTL 271
A W QQ HK G+ + RP+L++F NI I + +
Sbjct: 141 AGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIEDVFI 200
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
N+P W +H + S NI+ +GI A + N DGI+P+ N IE+ +GDD VA+K
Sbjct: 201 TNAPFWCIHLLKSENIICRGIRYDAKLV--NNDGIDPEYTRNLLIENIEFNNGDDNVAIK 258
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGV 390
G D G P++ ++IR C + LGSEMS GIQ V E+ + G+
Sbjct: 259 CGRDNDGWKTSCPSENIIIR--NCKFKGLHGVVLGSEMSSGIQHVFVENCTYGGYCKRGI 316
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY-GSHADNHYDPKALPVIQGINYRDI 449
IKT RGG+++DIYV ++ F++T Y G DNH+ + I +D+
Sbjct: 317 FIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGEGMDNHH----FTEVHDIYVKDL 372
Query: 450 VADNVSMAAR-LEGISGDPFTGICIANATIGMAA 482
V++AA L+G P + N + A
Sbjct: 373 KCKKVNVAALVLQGTEAKPIYNVTFDNVDVDKAG 406
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 177/364 (48%), Gaps = 46/364 (12%)
Query: 150 GGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAA 208
GG ++ VP G++ TG+ +L S+ L++ + A L SQD ++ P++ + R
Sbjct: 94 GGGKVVVPPGEYHTGAIHLRSNIELHISRGATLRFSQDPADYLPMV-----HTRWEGIEL 148
Query: 209 GRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW-------------QQFHKGKL----- 248
Y+ ++ + DV +TG G +DGQ WW + H+ L
Sbjct: 149 YNYSPFVYAHGVHDVAITG-GGVLDGQANPQHWWPWKTEPDGRGGVIETEHRDALHAMAE 207
Query: 249 --------KYT----RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
++T RP ++F + +I +S +TL NSP W +HPV S N++V G+T+ +
Sbjct: 208 RGVPVEQRRFTDSKLRPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVTLDS 267
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P PN+DG+NP+S N I + +GDDC+A+KSG + G G+P++ +VI
Sbjct: 268 P-DGPNSDGVNPESSRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMF 326
Query: 357 SPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
+ + +GSEMSG +++V AE + + + +RIKT RGG V+ +Y R +
Sbjct: 327 DGHGG-VVIGSEMSGDVRNVFAERNVMDSPRLDRALRIKTNSVRGGTVEGVYFRDNDIPE 385
Query: 415 MKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIA 474
+ A + D P ++G++ ++ + A L G P T + I
Sbjct: 386 VADAVIRVNFHYEEGDT---GDFTPTVRGLHIENVHSVGGEFALYLRGYERSPVTDVTIR 442
Query: 475 NATI 478
++T
Sbjct: 443 DSTF 446
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 91/137 (66%)
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SGWDEYGI YG P+ ++IRR+ + S+ +ALGSEMSGGIQ V A+D++ N+ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVA 451
IKTA GRGGYV+D+Y+ +TM + TG YG H D+ YDP AL IQ I ++DI+
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 452 DNVSMAARLEGISGDPF 468
D + A + GI PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 55/403 (13%)
Query: 126 GDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLA 184
G + ++ A + AIN+ ++ S GG + +P G + TG+ ++SH L + + A L
Sbjct: 51 GASEKASAAANQKAINRVIAMASKKGGGNVIIPKGTYSTGAITMLSHVNLVVEEGATLHF 110
Query: 185 SQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA--LWWQQ 242
+ + +P+++ A Y+ I+ TD+ +TG GTIDG G+ WW
Sbjct: 111 AFEPKLYPLVRT-----SWEGLACWNYSPCIYAYKATDIAITG-KGTIDGGGSNDTWWPM 164
Query: 243 FHKGKLKYT-------------------------------------RPYLMEFMYTDNIQ 265
K Y RP L+ F+ ++NI
Sbjct: 165 NGNPKFGYKPGITKESQKLGSRAKLMKMAENDVPFDERKFGMGQGLRPQLINFVRSENIL 224
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
I +TLL SP W +HP+ NI V G+ I PN DG +P++C N I++ +GD
Sbjct: 225 IKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEACENVIIQNTLFHTGD 282
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKA 383
DC+A+KSG + G +G P+K ++IR + + +GSE+SGG ++V AE+ + +
Sbjct: 283 DCIAIKSGRNNDGRFWGKPSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAENCYMDS 341
Query: 384 INTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-FWMTGNYGSHADNHYDPKALPVIQ 442
N E +RIKT RGG +++I +R + + K A + +Y ++ D + + P ++
Sbjct: 342 PNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENNEDCYRGFE--PTVR 399
Query: 443 GINYRDIVADNVSMAARLEGISG-DPFTGICIANATIGMAAKH 484
+N ++ + + G+ D I + N T K
Sbjct: 400 NVNMENVTCEKSEYGVLMIGLDNVDNIYDINLKNCTFNGVIKQ 442
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 188/403 (46%), Gaps = 51/403 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL-TGSFNLISHFTLYL 176
S+ FG GDGK AF A+ + + GGA + VPAG++L G + +S+ L L
Sbjct: 52 SLISFGAKGDGKKDCKPAFDKAMKRAAHM---GGAHIVVPAGEYLLNGPIHFVSNVCLEL 108
Query: 177 HKDAFL-LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ A L +S+ P++K Y+ I+G L +V + G G IDG
Sbjct: 109 QEGATLKFSSEPAFYLPLVKT-----SWEGTFLQNYSPFIYGYQLENVSIIG-KGVIDGN 162
Query: 236 G----ALW------WQQF-----HK---------GKLKYTRPYLMEFMYTDNIQISSLTL 271
A W QQ HK G+ + RP+L++F NI I + +
Sbjct: 163 AGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIEDVFI 222
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
N+P W +H + S NI+ +GI A + N DGI+P+ N IE+ +GDD VA+K
Sbjct: 223 TNAPFWCIHLLKSENIICRGIRYDAKLV--NNDGIDPEYTRNLLIENIEFNNGDDNVAIK 280
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGV 390
G D G P++ ++IR C + LGSEMS GIQ V E+ + G+
Sbjct: 281 CGRDNDGWKTSCPSENIIIR--NCKFKGLHGVVLGSEMSSGIQHVFVENCTYGGYCKRGI 338
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY-GSHADNHYDPKALPVIQGINYRDI 449
IKT RGG+++DIYV ++ F++T Y G DNH+ + I +D+
Sbjct: 339 FIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGEGMDNHH----FTEVHDIYVKDL 394
Query: 450 VADNVSMAAR-LEGISGDP-----FTGICIANATIGMAAKHKK 486
V++AA L+G P F + + A IG++ + K
Sbjct: 395 KCKKVNVAALVLQGTEAKPIYNVTFDNVDVDKAGIGLSFSNTK 437
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 189/388 (48%), Gaps = 52/388 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + + +AINQ + S +GG + VP G + TG L S+ ++
Sbjct: 50 ITDFGAKPD---TPDEPCHEAINQAIVTCSLNGGGTVVVPKGTFHTGPVTLKSNVNFHVE 106
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D R LI+ T++ +TG GTIDGQG+
Sbjct: 107 EGAVLKFSTDQSLY--FPAVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGS 161
Query: 238 --LWWQ---------------QFHKGKLKY--------------------TRPYLMEFMY 260
WW Q + G+ + RP L+
Sbjct: 162 NETWWSMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRIMKPEDGMRPQLINLYS 221
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ + I +TLLNSP W +HP++ +++V+G+ + PN DG +P+SC N IE+C
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFN--RGPNGDGCDPESCKNVLIENCT 279
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG ++ G + +P++ +++R + + + +GSE+SGG +++ E+
Sbjct: 280 FDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKNGHGG-VVIGSEISGGYRNLFVEN 338
Query: 381 IK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ + + + +RIKT+ RGG +++++VR +T+ + A + N +
Sbjct: 339 CRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCNRGYA 397
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGD 466
P ++ ++ +++ + + + G+ D
Sbjct: 398 PTVRNVHLKNVTCEKSKLGVLIIGLDDD 425
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 193/453 (42%), Gaps = 81/453 (17%)
Query: 96 SRKARRLDSFEYNAISC---RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGA 152
SR +L+ FE I+ R + SI +G DG T +T A A+N +
Sbjct: 247 SRFTDKLE-FELPKIAAPFFRKDTFSIVRYGAKSDGITLSTPAINQAVNLAHEAGG---G 302
Query: 153 QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT 212
+ VP+G WLTG L S+ L++ + A L S ++P++K + G DA R
Sbjct: 303 VVVVPSGFWLTGPIVLKSNVNLHISQGALLQFSNKREDFPLVK---TTWEGEDAI--RCQ 357
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGALW------------WQQF----------------H 244
+ I +++ +TG G IDG G +W W++
Sbjct: 358 APISAVEASNIAITG-TGIIDGAGQVWRQVKKDKLTEAQWKKLIASGGVLDEEKRTWYPS 416
Query: 245 KGKLK------------------------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
+ LK + RP ++ + + +T NSP+W +H
Sbjct: 417 ENALKGSKIQKPGSIAAGFNLNNCSEFKDFLRPNMVSLSRCTQVLLEGITFQNSPAWTIH 476
Query: 281 PVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 340
P+ +I ++ + + P N D ++ +SC N +E C +GDD + +KSG D G
Sbjct: 477 PLLCEHITLRDVIVRNPWYGQNNDALDLESCRNGLVEGCSFDTGDDGICIKSGRDAEGRK 536
Query: 341 YGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG 400
G+PT+ +++R T + + +GSEMSGG++++ D + T+ G+R KTA GRGG
Sbjct: 537 RGVPTENIIVRNCTVFHGHGGFV-IGSEMSGGVRNLFVSDCNFLGTDVGLRFKTARGRGG 595
Query: 401 YVKDIYVRGMTM-------------HTMKWAFWMTGNYGSHADNHYDP--KALPVIQGIN 445
V++IYV + M + K + G + +P + P + +
Sbjct: 596 IVENIYVTDINMTNIPGEAILFDMYYMAKDPVSLNGEKNVLPEMKAEPLGEGTPQFRNFH 655
Query: 446 YRDIVADNVSMAARLEGISGDPFTGICIANATI 478
++IV + G+ P I I NA I
Sbjct: 656 IKNIVCQGAETGILIRGLPEMPIKNISIENANI 688
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 188/388 (48%), Gaps = 52/388 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + +AINQ + +GG + VP G + TG L S+ ++
Sbjct: 50 ITDFGAKPDTPDA---PCHEAINQAIVTCCLNGGGTVIVPKGTFYTGPITLKSNVNFHVE 106
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D R LI+ T++ +TG GTIDGQG+
Sbjct: 107 EGAILKFSTDQSLY--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGS 161
Query: 238 --LWW---------------QQFHKGKLKYT--------------------RPYLMEFMY 260
WW Q + G+ + RP L+
Sbjct: 162 NDTWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRVMTPEDGLRPQLINLYS 221
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ + I +TLLNSP W +HP++ +++V+G+ + PN DG +P+SC N IE+C
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYN--RGPNGDGCDPESCKNVLIENCT 279
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG ++ G +G+P++ +++R + + +GSE+SGG +++ E+
Sbjct: 280 FDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVEN 338
Query: 381 IK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
K + + + +RIKT+ RGG +++++VR +T+ + A + N + +
Sbjct: 339 CKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRENCNRGFT 397
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGD 466
P ++ ++ +++ + + + G+ D
Sbjct: 398 PTVRNVHLKNVTCEKSKLGVLIIGLDND 425
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 177/367 (48%), Gaps = 58/367 (15%)
Query: 94 AESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTS-NTKAFKDAINQLSQYSSDGGA 152
AE R R S E I R + IT FG + N +A AI L++ GG
Sbjct: 27 AEYRAIER--SIEQPKIVKR--TVVITKFGAKTTASAAQNQQAIHRAIAYLAKL---GGG 79
Query: 153 QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT 212
++ V AGKW TG+ L S L + KDA L D + +P++K Y+
Sbjct: 80 KVVVLAGKWQTGALRLTSGIELVVSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYS 134
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGA--LWW---------------------------QQF 243
I+ DV+V+G+ GTIDG G+ WW QQF
Sbjct: 135 PCIYSYGADDVVVSGE-GTIDGGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQF 193
Query: 244 HKGKLKY----------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
+ + + RP L+ F+ + +++S +TLL+SP W +HP+ N+ V G+
Sbjct: 194 AEDDVPWDERRFGLGQGLRPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVK 253
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I PN DG +P++C N I++ + +GDDC+A+KSG + G + P++ ++IR
Sbjct: 254 IWN--EGPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNC 311
Query: 354 TCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
+ I +GSE+SGG ++V AED + + + + +RIKT RGG +++I +R +
Sbjct: 312 VMEDGHGG-IVIGSEISGGCKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVK 370
Query: 412 MHTMKWA 418
+ K A
Sbjct: 371 VGQCKEA 377
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 191/406 (47%), Gaps = 69/406 (16%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I +G G TKAF +A ++ + GG ++ V G +L+G +L+S+ L++ K
Sbjct: 74 IRAYGARAGGAIDATKAFANA---IAACHAAGGGKVLVSGGTYLSGPIHLLSNVNLHVEK 130
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
A + D + LP+ + R Y+ LI+ ++ +TG+ GT+DGQ
Sbjct: 131 GARIAFITDPKAY-----LPAVFTRWEGMELMGYSPLIYAYRQENIAITGE-GTLDGQAN 184
Query: 237 -ALWW--------------------QQFHKGKLKYT------------------RPYLME 257
WW Q + +L+ RP ++
Sbjct: 185 RTTWWPWKGGAWKGGKNWSVPGFPTQDEGREQLQRAMEAGVAPEQRLFAEGANLRPPFVQ 244
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
+ + I +T++NSP W ++PV ++++V+G+T + PN+DG +P+SC IE
Sbjct: 245 PYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDS--MGPNSDGCDPESCDRVLIE 302
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
DCY +GDDC+A+KSG + G P++ +VIR + + +GSEMSGG+++V
Sbjct: 303 DCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMRRGHGGVV-IGSEMSGGVRNVF 361
Query: 378 AE--DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-----WMTGNYGSHAD 430
E ++ + + E G+RIKT RGG V++ + R +T+ +K A + G+ G H
Sbjct: 362 VEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQYEEGDAGEHT- 420
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
P+++ I++R I ++ G P + + + N
Sbjct: 421 --------PIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRNC 458
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 186/408 (45%), Gaps = 56/408 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITD+G + +T+ +KA AI + + GG + +PAG+WLTG +L S+ L+L K
Sbjct: 55 ITDYGALQGNQTATSKAITTAIEKAHKL---GGGIVVIPAGEWLTGKIHLKSNVNLHLDK 111
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL S++ ++ LP+ + Y+ LI+ ++ +TG G I +
Sbjct: 112 GALLLFSENPADY-----LPAVHSSWEGMECYNYSPLIYAYECKNIAITGQ-GEIKAKMD 165
Query: 238 LWWQQF-----HKGKLK----------------------YTRPYLMEFMYTDNIQISSLT 270
+W F H +K + RP ++F ++N+ + ++
Sbjct: 166 VWETWFTRPKPHMESIKRLYNLASAYTPLEQRQMVNDTAHLRPQFIQFNRSENVLLEGIS 225
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ NSP W +H S NI+++ + + A N DG++P+ N IE+C GDD +A+
Sbjct: 226 ITNSPFWTIHTYLSKNIIIRNLNVYA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAI 283
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN---TE 387
KSG + G P+K ++IR T + + IA+GSE+SGGI++V + ++
Sbjct: 284 KSGRNPEGWRLKAPSKNIIIRNCTVKNGHQ-LIAIGSELSGGIENVFVDSCVVMDGAKLN 342
Query: 388 SGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--------PKALP 439
+ IKT GGYV++IY + ++ G G D Y + L
Sbjct: 343 HLLFIKTNERMGGYVRNIYASNLQAGRIE-----LGILGIETDVLYQWRNLVPTVERRLT 397
Query: 440 VIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKV 487
I+ + ++ A NV +R+ G P I + N + K +
Sbjct: 398 PIKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNVEGKTVEEEKHI 445
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 156/342 (45%), Gaps = 63/342 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
++ SI FG DGK NTKA +AI + + GG ++ +P G WLTG L+S+ L
Sbjct: 55 YTISIVAFGAQNDGKFLNTKAINEAIKAVH---AKGGGKVVIPEGLWLTGPIELLSNVNL 111
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y ++A +L + D +P+I+ R R S I N ++ +TG GT DG
Sbjct: 112 YTERNAMILFTDDFEAYPIIETSFEGLETR-----RCQSPISARNAENIAITG-YGTFDG 165
Query: 235 QGALW------------WQQFHK----------------GKLK----------------- 249
G W W + K G LK
Sbjct: 166 SGDSWRPVKRDKLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPEGINTD 225
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + + + +T NSPSW +HP+ +I + + + P S
Sbjct: 226 EEWDEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQ 285
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I + +GDD + +KSG DE G G P + ++++ T + +
Sbjct: 286 NGDALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLHGHGG 345
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ D + T+ G+R K+ GRGG V+
Sbjct: 346 FV-VGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVE 386
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 159/332 (47%), Gaps = 27/332 (8%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG GDG + +T A + A+ + G + + AG++L+ L S + L + A
Sbjct: 83 FGAKGDGVSDDTAALQAAL-----MACPPGGLVRLEAGRYLSAPLFLKSDMAVELCEGAH 137
Query: 182 LLASQDLNEWPVIKP------------LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDN 229
+L +D+ +WPV+ L S+ DA +L+F N V + G
Sbjct: 138 ILGHRDITKWPVLPGVLPDAEGVKHTCLGSWEGEADACHAGLFNLLFAQN---VQIYG-R 193
Query: 230 GTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
G +D Q WW++ K + RP L+ + + + + +TL NSPSW VHP++S +
Sbjct: 194 GVMDAQAGFDTWWER-PKARFIGWRPRLIFMVECEQVILQGMTLKNSPSWTVHPLFSRGL 252
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
+ I AP SPNTDG+NP+S T+ I GDDC+A+KSG PT++
Sbjct: 253 TFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMARRSVRPTRR 312
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVKDI 405
+ I + A + +GSEM+ G+ D+ + INT+ G+R+KT GRG ++ +
Sbjct: 313 VRISNCRMKDGHGAVV-IGSEMACGVYDISVQTCLFINTDRGIRLKTRRGRGREAVIRGL 371
Query: 406 YVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA 437
R + M + AF + Y D D A
Sbjct: 372 NCRHIRMEGVGSAFVINSFYWCDPDGKTDEVA 403
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 185/401 (46%), Gaps = 62/401 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITD+G + + + + ++A DAI + + GG ++ +P G+WLTG +L S+ L+L +
Sbjct: 54 ITDYGALPNDQKATSRAIMDAI---KEAHAQGGGRVVIPKGEWLTGKIHLKSNINLHLEQ 110
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL S + ++ LP+ + Y+ LI+ ++ +TG G + +
Sbjct: 111 GAVLLFSDNPQDY-----LPAVHSSWEGLECFNYSPLIYAYKCKNIAITGQ-GELKAKMD 164
Query: 238 LWWQQF-----HKGKLKYT----------------------RPYLMEFMYTDNIQISSLT 270
W F H LK RP ++F ++NI + +T
Sbjct: 165 TWRSWFDRPPGHMNSLKELYHMAANNVPVEQRQMVNDSANLRPQFIQFNRSENILLQGVT 224
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ NSP W +HP S N+ ++ +T+ A N DG++P+ N IE+C GDD +AV
Sbjct: 225 ITNSPFWVIHPYLSKNVSIKEVTVFA--HGHNNDGVDPEMSQNIIIENCTFDQGDDAIAV 282
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
KSG ++ P K +VI+ I+ + +A+GSE+SGGI+++ + + E G
Sbjct: 283 KSGRNQDAWRLATPAKNIVIKNCKIINGHQ-LMAIGSELSGGIENIYMSNCQ---VEQGA 338
Query: 391 R------IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--------PK 436
+ IKT RGG V +IY M +++ G G D Y +
Sbjct: 339 KLNHLLFIKTNERRGGIVSNIY-----MDSIQAGEIAEGILGIDTDVLYQWRNLVPTYQR 393
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
L VI+ + DI A+NV+ +++ G P + + T
Sbjct: 394 ELTVIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRVT 434
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 194/437 (44%), Gaps = 53/437 (12%)
Query: 82 LLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASI-------TDFGGVGDGKTSNTK 134
L+ +ALL + A + + ++I + A+I T FG GDGK
Sbjct: 6 LIFTLALLGFVSGSANPADDMRIMKRDSILAQITGATIPEKEWLITSFGAKGDGKKDCKP 65
Query: 135 AFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFL-LASQDLNEWP 192
AF A+ + ++ GGA + VPAG++ L G + +S+ L L + A L A + P
Sbjct: 66 AFDKAMKRAAK---SGGAHIVVPAGEYKLNGPIHFVSNVCLELQEGAVLKFAPEPEYYLP 122
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQQFHKGKL 248
++K Y+ I+G L ++ + G GTIDG A W Q KG+
Sbjct: 123 LVKT-----SWEGTFLQNYSPFIYGYQLENISIIGK-GTIDGNAGSTFATWKSQQKKGQQ 176
Query: 249 --------------------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
Y RP L++F NI + + + NSP W +H + S NI+
Sbjct: 177 LSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNITLEGVFITNSPFWCIHLLKSENII 236
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQL 348
+G+ A + N DGI+P+ N IE+ +GDD VA+K G D G P++ +
Sbjct: 237 CRGLRYDAKLV--NNDGIDPEFTRNLLIENIEFNNGDDNVAIKCGRDNDGWTTARPSENI 294
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGVRIKTAVGRGGYVKDIYV 407
+IR C + LGSEMS G+Q+V E+ + G+ IKT RGG++++IYV
Sbjct: 295 IIR--NCKFKGLHGVVLGSEMSAGVQNVFIENCTYGGYCKRGIYIKTNPDRGGFIRNIYV 352
Query: 408 RGMTMHTMKWAFWMTGNY-GSHADNHYDPKALPVIQGINYRDIVADNVSMAAR-LEGISG 465
++ F+ T Y G DN + + I +D+ S AA L+G +
Sbjct: 353 NNCRFGEVEDLFYATSMYAGEGMDNTH----FTEVHDIYVKDVTCQKASAAALVLQGTTV 408
Query: 466 DPFTGICIANATIGMAA 482
P + N + A
Sbjct: 409 KPIYNVRFENVNVDQAG 425
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 189/407 (46%), Gaps = 60/407 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I+DFG V GK N+ A AI + ++ VP G++LTG+ +L S+ L+L K
Sbjct: 75 ISDFGAVPGGKVLNSDAIAAAIAACAAAGG---GRVRVPQGRFLTGAIHLKSNVNLHLDK 131
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+ S + + + LP+ + R + LI+ ++ VTG G +DG GA
Sbjct: 132 GAVLVFSPNPDHY-----LPAVFTRWEGMEMMGLSPLIYAYGQRNIAVTG-QGVLDG-GA 184
Query: 238 ---LWW-------------------QQFHKGKLK------------------YTRPYLME 257
WW Q+ + KL+ + RP ++
Sbjct: 185 DDNTWWPWKGPHPEGHWRQDPIAQTQKAARDKLQQEVLAGTDPRTRLHGQGSFLRPAFIQ 244
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
N+ I +TL+NSP W +HPV ++ V+G+T + PN DG +P+ C + IE
Sbjct: 245 PYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRS--HGPNNDGCDPECCDHVVIE 302
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
C +GDDC+A+KSG +E G G + LV+R + + LGSE+SGG+ +V
Sbjct: 303 GCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQMKDGHGGLV-LGSEISGGVYNVF 361
Query: 378 AEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP 435
++ + + E RIKT RGG ++ I +R + + +K A + Y + +
Sbjct: 362 LDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSINFFYEEGQEGRF-- 419
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
LP ++ I+ ++V + A L G + P G+ ++N I A
Sbjct: 420 --LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRIDKVA 464
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 158/324 (48%), Gaps = 33/324 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+++ F GDGK +TK + A+N+ ++ + L + G +LTG+ + S+ L
Sbjct: 10 TLSQFTPHGDGKNLDTKIIQQALNEANKQQTG----LTIGPGDYLTGALFVPSNSHLQFE 65
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+ S DL ++P I + R AA ++I G DV++ G G IDG G
Sbjct: 66 AGARLIGSTDLADYPEIDTRVAGVEMRWPAA--ILNVIDGE---DVVIEGP-GVIDGNGP 119
Query: 238 LWWQQF----HKG---------------KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWN 278
+WW+++ KG + RP + F N IS LTL+ S WN
Sbjct: 120 VWWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCKNCAISDLTLMRSGFWN 179
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
Y + V +T+ P+TDGI+ DS + R+ +C + GDDC+ VKSG D G
Sbjct: 180 CQLTYCQQMEVSHLTV-KENNGPSTDGIDIDSSSYVRVHNCELSCGDDCIVVKSGRDGDG 238
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ P + I S Y T LGSE+S GI DV D+ NT+ G R+K++ R
Sbjct: 239 LRVNQPAAHIEIDHCIIHSGYGVT--LGSEVSAGISDVHIHDMIFENTDCGFRMKSSADR 296
Query: 399 GGYVKDIYVRGMTMHTMKWAF-WM 421
GG +K++ + MH +++ F W+
Sbjct: 297 GGVIKNVVAEHLEMHNVQFPFSWL 320
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 186/388 (47%), Gaps = 72/388 (18%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDFGGVGDGKTSNTKA-F 136
L+PL S RG + ++++ S E I+ R + IT +G KTS + A
Sbjct: 2 LLPLCA-----SARGWNETEYKQIEQSIERPVIANR--TILITAYGA----KTSASAAQN 50
Query: 137 KDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
+ AIN+ ++ S GG + VP G W TG+ L SH L + + A L + + +P++
Sbjct: 51 QKAINRAIAVASMKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLYPLV- 109
Query: 196 PLPSYGRGRDAAAG----RYTSLIFGTNLTDVIVTGDNGTIDGQGA--LWWQ-------- 241
R A G Y+ I+ TD+ V+G GTIDG G+ WW
Sbjct: 110 --------RTAWEGLECYNYSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWNGNPRFG 160
Query: 242 ----------------QFHK-------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
Q K GK + RP L+ FM+ + I I + ++
Sbjct: 161 YKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILIRDVKMV 220
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +HP+ S NI V + I PN DG +P++C N I++C +GDDC+A+KS
Sbjct: 221 NSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDDCIAIKS 278
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGV 390
G + G +G P+K ++IR + + +GSE+SGG ++V AED + + E +
Sbjct: 279 GRNNDGRLWGKPSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAEDCYMDSPELERVL 337
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
RIKT RGG +++I +R + + K A
Sbjct: 338 RIKTNNCRGGLIQNINMRNVKVGQCKEA 365
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 179/401 (44%), Gaps = 57/401 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +FG V DG + A + AI S GG + G +LTG +L S L+L K
Sbjct: 63 VENFGAVSDGVFDCSDAIQKAIEHAE---SQGGGTVVFTQGVYLTGPIHLRSKIALHLEK 119
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG--Q 235
DA L D N + LP+ + R ++ LI+ L DV +TG GT+DG
Sbjct: 120 DATLKFVTDPNRY-----LPAVFTRWEGMELMGFSPLIYAYGLNDVAITG-QGTLDGGAN 173
Query: 236 GALWW------QQFHKGKLK------------------------------YTRPYLMEFM 259
WW ++ H ++ + RP ++F
Sbjct: 174 DQTWWPWKGPHKEAHWDLIEGQDQKPARDYLFAMAERGVPPRERVFADGGFLRPPFLQFY 233
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
I + + + N+P W +HPV S ++ ++G+ + PN+DG +P+SC IEDC
Sbjct: 234 DCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQS--YGPNSDGCDPESCERVVIEDC 291
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD--VR 377
+GDDC+A+KSG + G G+P K +V++ + + +GSE+SGG+ + VR
Sbjct: 292 VFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHGGVV-IGSEISGGVANVHVR 350
Query: 378 AEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA 437
+ + + E +RIKT RGG ++ + +T+ ++K F + Y D K
Sbjct: 351 HCTMDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVF-VINFYYEEGDRG---KW 406
Query: 438 LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+P+++ I D+ L G P T + + N +
Sbjct: 407 MPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLRNWNV 447
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 197/412 (47%), Gaps = 67/412 (16%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLY 175
A++ DF + + +A DAI SQ +S GG ++ VP G WL G +L S+ L+
Sbjct: 72 ANVVDFLAIHNNDFK--QALHDAI---SQIASQGGGKVVVPKGNWLCKGPIHLQSNINLH 126
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ A + S + +++ KP + R Y+ LI+ T++ +TG GT+DG
Sbjct: 127 VELGATIQFSTNPDDY---KPY-VFTRWEGMELMGYSPLIYAYEQTNIAITGK-GTLDGC 181
Query: 236 GAL--WW------------------QQFHKGKLK-----------------YTRPYLMEF 258
A WW Q++ + L+ Y RP ++
Sbjct: 182 AAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVERGTPVSERVFEKNYLRPPFIQP 241
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+N+ I +T+L SP W V+PV N+ V + + PN+DG +P+SCTN I +
Sbjct: 242 YRCENVLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDPESCTNVIISN 299
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG + G +P ++I + + + +GSE+SGG++++ A
Sbjct: 300 CTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCEMKAGHGG-VVIGSEISGGVENLYA 358
Query: 379 E--DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHADN 431
+ + + + + G+RIKT RGG++K++ R + + T+K A F+ G+ G+
Sbjct: 359 QYCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNFP-- 416
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
P+++ I ++ + + A L G P +G+ + N TI A K
Sbjct: 417 -------PLLEDITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTIKHAQK 461
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 182/377 (48%), Gaps = 67/377 (17%)
Query: 90 SQRGAESRKARRLD-SFEYNAISCRAHSASITDFGGVGDGKTSNTKA-FKDAINQ-LSQY 146
S RG + ++++ S E I+ R + IT +G KTS + A + AIN+ ++
Sbjct: 38 SARGWNETEYKQIEQSIERPVIANR--TILITAYGA----KTSASAAQNQKAINRAIAVA 91
Query: 147 SSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDA 206
S GG + VP G W TG+ L SH L + + A L + + +P++ R A
Sbjct: 92 SMKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLYPLV---------RTA 142
Query: 207 AAG----RYTSLIFGTNLTDVIVTGDNGTIDGQGA--LWWQ------------------- 241
G Y+ I+ TD+ V+G GTIDG G+ WW
Sbjct: 143 WEGLECYNYSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQR 201
Query: 242 -----QFHK-------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
Q K GK + RP L+ FM+ + I I + ++NSP W +HP+
Sbjct: 202 LGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILIRDVKMVNSPFWVIHPLL 261
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
S NI V + I PN DG +P++C N I++C +GDDC+A+KSG + G +G
Sbjct: 262 SKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGK 319
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGY 401
P+K ++IR + + +GSE+SGG ++V AED + + E +RIKT RGG
Sbjct: 320 PSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAEDCYMDSPELERVLRIKTNNCRGGL 378
Query: 402 VKDIYVRGMTMHTMKWA 418
+++I +R + + K A
Sbjct: 379 IQNINMRNVKVGQCKEA 395
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 166/343 (48%), Gaps = 66/343 (19%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + +I+ +G DG T NTKA AI + + GG + VP G W+TG L S+
Sbjct: 275 RKDTFNISRYGAKADGITVNTKAINQAIEICN---AAGGGTVLVPKGLWVTGPIVLKSNV 331
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L K A L S++ +++P++ L ++ G+++ R + I+G +L ++ +TG+ G +
Sbjct: 332 NLHLEKGALLQFSKNYDDYPIV--LTTW-EGQESY--RCQAPIWGVDLENIAITGE-GVL 385
Query: 233 DG------------QGALWWQQFHK---------------------------GKL----- 248
DG Q A W K G++
Sbjct: 386 DGGGDAWRAIKREKQTAGQWANLIKSGGVVDEKQNNWYPSEKSLKGNMIPNAGRILNGVK 445
Query: 249 ----------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
+ RP ++ NI I +T NSP+W +HP+ +I V+ + + P
Sbjct: 446 PTPEELASYKDFLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPW 505
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
+ N+D I+ +SC N +E C +GDD + +KSG DE G G+PT+ VI+ CI
Sbjct: 506 YAQNSDAIDLESCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIK--DCIVY 563
Query: 359 YS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG 400
++ +GSEMSGG++++ D + ++ G+R KTA GRGG
Sbjct: 564 HAHGGFVIGSEMSGGVRNMFISDCTFMGSDVGLRFKTARGRGG 606
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 196/414 (47%), Gaps = 69/414 (16%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWL-TGSFNLISHFT 173
A++TDF N FK A++ + Q + GG ++ VP G WL +G +L S+
Sbjct: 71 EANVTDF------LNENGSDFKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNIN 124
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L++ A + S + +++ KP + R Y+ LI+ +++ +TG GT+D
Sbjct: 125 LHIEAGATIRFSTNPDDY---KPY-VFTRWEGMELMGYSPLIYAFEQSNIAITG-KGTLD 179
Query: 234 GQGAL--WW------------------QQFHKGKLK-----------------YTRPYLM 256
G A WW Q++ + L+ Y RP +
Sbjct: 180 GSAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFI 239
Query: 257 EFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
+ +N+ I +T+L SP W V+PV N+ V + PN+DG +P+SCTN I
Sbjct: 240 QPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVLI 297
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
+C +GDDC+A+KSG + G +P +VI + + + +GSE+SGG++++
Sbjct: 298 SNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGG-VVIGSEISGGVENL 356
Query: 377 RAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHA 429
A+ + + + + G+RIKT RGG++K++ R + + T+K A F+ G+ G+
Sbjct: 357 YAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNFP 416
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
P+++ I ++ + + A L G P +G+ + N TI A K
Sbjct: 417 ---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIKRALK 461
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 178/408 (43%), Gaps = 57/408 (13%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLYLHKDA 180
FGG DG++ A + AI+ + GG ++ + G W + G L SH L + A
Sbjct: 63 FGGRADGRSDARPAIQKAIDAAHRA---GGGRVTLSPGVWFSRGPVRLKSHVELRVEAGA 119
Query: 181 FLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW 240
LL S + +++ + P+ + G + Y+ I+ + DV +TG G IDG +
Sbjct: 120 TLLFSPEPDDY--LPPVKTRWEGTEVYT--YSPFIYAAGVEDVAITG-GGVIDGNAQSRF 174
Query: 241 QQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPS 276
+H GK + RP L++ +++ T NSP
Sbjct: 175 HAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPF 234
Query: 277 WNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
W H VY+ ++V+GIT+ + PN DG++ +S T IE+ +GDD V +KSG D
Sbjct: 235 WVNHLVYADEVVVRGITVDSHF--PNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDL 292
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAV 396
G G P+ +++R IALGSEMSGG+ DV D S +R K +
Sbjct: 293 DGRRIGRPSAWVLVRGNDMGG--EDGIALGSEMSGGVHDVFFTDNVLRKGLSAIRFKANL 350
Query: 397 GRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSM 456
RGG V+ + VR MT+ FW NY ++ YRDIV +N +
Sbjct: 351 DRGGTVERVRVRNMTVEDFGTLFWFQLNYPGELGGNFPS---------TYRDIVFENFKV 401
Query: 457 AARLEGISGDPFTGICIANATI------GMAAKHKKVPWTCADIGGMT 498
G +G F A A + + + KVPW ++ +T
Sbjct: 402 -----GGAGTFFEAHAPAQAPLKDVVLRNIVVREAKVPWVLENVERLT 444
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 186/399 (46%), Gaps = 52/399 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ D+G + DG NT F I S+ GG + +P G + TG +L ++ L+L
Sbjct: 58 NVMDYGAISDGVFDNTVVFNKTIKTCSE---KGGGMVLIPKGTYFTGPIHLDNNVNLHLS 114
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A ++ S + ++P++ + Y+ LI+ N T+V +TG G ++G+ +
Sbjct: 115 EGAEIVFSTNPKDYPLV-----HTSFEGTELMNYSPLIYAYNKTNVAITGK-GILNGKAS 168
Query: 238 L--WWQQFHK--------------------------------GKLKYTRPYLMEFMYTDN 263
WW K G Y RP +EF N
Sbjct: 169 NDNWWPWCGKSVYGWKKGDPIQNVKQLMESAEKGMAVKDRVFGDGNYLRPNFIEFFECKN 228
Query: 264 IQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVS 323
+ + ++N+P W +HP+ S++++V GI I + PN DG +P+ N I +C +
Sbjct: 229 VHLKDFKIVNAPFWIIHPIKSNHVIVDGIHIES--HGPNNDGCDPEYSKNVIIRNCTFDT 286
Query: 324 GDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--I 381
GDDC+A+K+G D G + ++ ++I+ + + +GSE+S G+ +V E+ +
Sbjct: 287 GDDCIAIKAGRDSDGRRVAIKSENILIQNCKMFDGHGG-VTIGSEISAGVSNVFVENCIM 345
Query: 382 KAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-FWMTGNYGSHADNHYDPKALPV 440
+ + +RIK+ RGG +++IYVR +T+ +K + + +YG H + +P+
Sbjct: 346 DSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVKESVLGIDLHYGVHGNQ--TGTFMPI 403
Query: 441 IQGINYRDIVADNVSMAARL-EGISGDPFTGICIANATI 478
++ I + N + L +G G P + I TI
Sbjct: 404 VRNIFIENSTIKNGGLYGILAKGHPGFPISNIRFKEVTI 442
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 188/404 (46%), Gaps = 59/404 (14%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
S + DFG DGK +NT+AF AI ++ V G +L+G +L+S+ L+
Sbjct: 87 SFDVRDFGAKADGKHNNTQAFAAAIKACHDAGG---GKVVVAGGDYLSGPIHLLSNINLH 143
Query: 176 LHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ + A +L D + + LP+ + R Y+ LI+ T++ +TG G +DG
Sbjct: 144 VAEGARILFITDPSAY-----LPAVFTRWEGMELMGYSPLIYAYGQTNIAITG-KGVLDG 197
Query: 235 QG--ALWW--------------------QQFHKGKL------------------KYTRPY 254
Q WW Q + KL Y RP
Sbjct: 198 QANRTTWWPWKGGAWKGGTDWSMPGVPTQDAARDKLMQDMENGVPVAERMYADGAYLRPP 257
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
++ N+ I +T+ N+P W ++PV N+ V G+ I+ PN+DG +P+SC N
Sbjct: 258 FIQPYACKNVLIEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPESCKNV 315
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I++C +GDDC+A+KSG + G PT+ +VI + + +GSE+SGG++
Sbjct: 316 VIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCKMREGHGGVV-IGSEISGGVR 374
Query: 375 DVRAE--DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
+V E ++ + N + G+RIKT RGG +++ ++R +T+ + A + +Y +
Sbjct: 375 NVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVIDFDY----EEG 430
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
K P ++ I+ R++ +N ++ G P + + N
Sbjct: 431 DAGKFTPTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTNC 474
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 55/385 (14%)
Query: 77 TKLVPLLIVVALLSQRGAESRKARRLD-SFEYNAISCRAHSASITDFGGVGDGKTSNTKA 135
T LV LL++ A G + +R++ S + I I+ +G + + +
Sbjct: 7 TLLVALLLIPACAWADGWNDAEYQRIEQSIQLPNIKQATKKYVISAYGAKQNASAAQNQK 66
Query: 136 FKDAINQL-SQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVI 194
AIN+L + S GG + +P G W TG+ + S L L + A L + + +P++
Sbjct: 67 ---AINKLIALVSKKGGGTIVIPKGTWRTGAIEMKSFVELNLEEGAVLQFAFEPKLYPLV 123
Query: 195 KPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA--LWWQ----------- 241
+ A Y+ I+ ++D+ +TG GTIDG G WWQ
Sbjct: 124 RTA-----WEGLACWNYSPCIYAYKVSDIAITG-KGTIDGGGNNDTWWQWNGNPYFGYKE 177
Query: 242 -----------------------QFHKGKL---KYTRPYLMEFMYTDNIQISSLTLLNSP 275
F + K + RP L+ F+ ++ I I + ++NSP
Sbjct: 178 GVTKEHQKMGSRARLQKMAENGVPFDERKFGMGQGLRPQLVNFVRSERILIKDVKMINSP 237
Query: 276 SWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 335
W +HP+ +I V G+T+ PN DG +P++C N I++C +GDDC+A+KSG +
Sbjct: 238 FWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEACENVLIQNCIFHTGDDCIAIKSGRN 295
Query: 336 EYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE--DIKAINTESGVRIK 393
G + P+K ++IR + + +GSE+SGG ++V AE ++ + + E +RIK
Sbjct: 296 NDGRLWNKPSKNIIIRNCRMEDGHGGVV-IGSEISGGCENVYAENCEMDSPHLERILRIK 354
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWA 418
T RGG +++I++R +T+ K A
Sbjct: 355 TNNCRGGLIQNIHMRKVTVGQCKEA 379
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 161/327 (49%), Gaps = 27/327 (8%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S ++ D+G V DG T NTKA + AI++ ++ +GG + GK+LTGS L
Sbjct: 44 RSYNVADYGAVADGVTMNTKAIQKAIDECAR---NGGGTVTFSPGKYLTGSVYLKEGVHF 100
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+ K LL S DL ++P + R ++LI +V+V+G+ G +
Sbjct: 101 IIPKHTTLLGSTDLKDYPEMNT-----RVAGIEMQWPSALINVLGQKNVMVSGE-GVVHA 154
Query: 235 QGALWWQQFHKGKLKY-------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHP 281
QG ++W + + Y RP + + ++ + LT + W +
Sbjct: 155 QGKVFWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVSESSDVTVKGLTFRQAGFWTIQI 214
Query: 282 VYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
+YSS V G+ I V P+TDG++ DS + +E+C I DD +KSG D G+
Sbjct: 215 LYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCNDDNFCLKSGRDADGL 274
Query: 340 AYGMPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
PT+ +VIR CIS + GSE SGGI+ V AE +KA T G+R+K+A+ R
Sbjct: 275 RVNRPTEYIVIR--NCISRAGGGLLTCGSETSGGIRHVLAEGLKAKGTTVGIRLKSAMNR 332
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GG + IY+R + M ++ F T N+
Sbjct: 333 GGTTEHIYIRDVEMDNVRTVFEATMNW 359
>gi|315570520|gb|ADU33264.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 407
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 25/354 (7%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
+++ A ++TDFG GK ++T A AI++ S+ D G + G++L+G F L
Sbjct: 15 SLTASATVYNVTDFGADSTGKNASTTAITKAIDKASE---DYGGVVRFTKGQYLSGPFEL 71
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
S+ TL D L D E+P + L G + YT LI + +V++ G
Sbjct: 72 KSNITLQFDDDVVLKFLDDPKEYPPLTKLLPNGL---TFSLPYTPLIRAFIVRNVVIRG- 127
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
+DG GA WW++ RP + F + NI + + + NSP +N+ +Y+ ++L
Sbjct: 128 KAILDGNGAPWWKRLPPPN---ARPQFLFFYQSYNITVEDVAIRNSPMYNIQLIYTDHVL 184
Query: 289 VQGITIIAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
++GI+I P + PNTDGIN + C + + + +GDDCVA+ + + + P
Sbjct: 185 LKGISIKNPPSYVDPGPNTDGINCNPCRYLHVTNVTVDTGDDCVALDADLGDKLMGR-WP 243
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
T+ ++I + + A +++GS + G++++ + T+ G+ IKT GRGG V+D
Sbjct: 244 TEHILIENSHMFAGHGA-VSIGSATTAGLRNITVRNCIFNGTDRGLYIKTRRGRGGLVED 302
Query: 405 IYVRGMTMHTMK------WAFWMTGNYGSHADN-HYDP--KALPVIQGINYRDI 449
I+ +TM ++ A + + G H N H+ P P I+ I YR I
Sbjct: 303 IHYHNITMLNIRKEGVAIAAVYNGTDEGMHERNIHWVPIDDTTPFIRNIRYRGI 356
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 188/414 (45%), Gaps = 67/414 (16%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A++ SI D GG GDG TSNT+AF+ AI++LS+ GG L VPAG +LTG + +
Sbjct: 44 ANTVSILDCGGKGDGITSNTEAFRKAISKLSKL---GGGHLNVPAGIYLTGLISFKDNID 100
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L+L K+A ++ S+D E+ IK G D A T I + ++ +TG+ G ID
Sbjct: 101 LHLEKNAIIVFSEDKKEF--IK--EENGVKDDKA----TPGINASKRKNISITGE-GIID 151
Query: 234 GQGALW------------WQQFH--------KGKLKY-------------------TRPY 254
G G W W F KG L Y R +
Sbjct: 152 GNGEWWRPVKRSKVSNTEWNDFKAMGGTESAKGDLWYPFNLKHFDNIAATPEAQEKMRTH 211
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
L+ +N+ I +T+ NSP +++ P N+++ G+T+ P + N D I+ +CTN
Sbjct: 212 LIRLTDCENVLIQGVTVENSPKFHIVPQRCKNVIIDGVTVRCPWNAQNGDAIDIGNCTNV 271
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
I + I +GDD + +K G + YG P + I+ + + +GSE SGG++
Sbjct: 272 LIVNNVIDAGDDGICMKGGAGAKALEYG-PCLNINIQDNIVYHAHGGFV-IGSEFSGGMK 329
Query: 375 DVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHADNHY 433
++ + T++ +R K++VGRGG +DIY+ + M + A Y DNH
Sbjct: 330 NIYVHNNTFSGTDTELRFKSSVGRGGTTEDIYISNIYMTDIDNQAIVFETTY---FDNHV 386
Query: 434 DPKA---------LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
K P I+ +DIV G G GI I NA I
Sbjct: 387 GAKKGAQPTKVEFAPNFTDIHMKDIVVRGCKTGIAAHGEKG-MIHGITIENANI 439
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 178/391 (45%), Gaps = 59/391 (15%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
+T A + AI+ Q + +P G++LTG+ L S +L+L A L+ SQDL ++
Sbjct: 19 STSAIQQAIDNAQQNDV-----IVIPPGRFLTGALFLKSGVSLHLDAGAQLVGSQDLADY 73
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGT-NLTDVIVTGDNGTIDGQGALWWQQF-----HK 245
P+I + G D R+ + I +V +TG GTIDGQGA+WWQ+F
Sbjct: 74 PLINTRVA---GIDM---RWPAGIINIIECENVSITG-TGTIDGQGAIWWQRFWGDDERS 126
Query: 246 GKLK--------------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
G ++ RP + + I + T S WN+H YS +I V+G
Sbjct: 127 GMVEDYSARGLRWVVDYDCQRPRNILIFESQTILLRDFTSRESGFWNMHLCYSRHIEVEG 186
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+ I + P+TDGI+ DSC R+E C + DD + +KSG + +VIR
Sbjct: 187 VQI-SNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGYEAAQKARTARDIVIR 245
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
C + I LGSE SGGI+ V ED T G RIK+A RGG+++DI V+ +
Sbjct: 246 --GCTLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDIIVQNLR 303
Query: 412 MHTMKWAFWMTGN------YGSHADNHYDPK-------------ALPVIQGINYRDIVA- 451
+ +++ + N YG D P+ L V+ G+ +I A
Sbjct: 304 LTDVRFPVLIQLNWFPQYSYGDRGDLADKPEHWRKLAAGVEGDAGLTVVSGLTINNITAR 363
Query: 452 --DN--VSMAARLEGISGDPFTGICIANATI 478
DN S A +EG P G+ + I
Sbjct: 364 RSDNKCFSRAFFIEGYPERPVAGLTLEGIVI 394
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 190/396 (47%), Gaps = 46/396 (11%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHF 172
A+ ++ G GD T+N F A ++ GG + VP G + + G + +S+
Sbjct: 39 AYQVNVLKLGAKGDSITNNKAVFDKA---MALCKKKGGGTIIVPKGIYKINGPIHFVSNV 95
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L + K A + S + ++P++ L S+ Y+ LI+ + T++ +TG G I
Sbjct: 96 NLKIEKGAKIKFSDNPQDYPLV--LTSW---EGTMLYNYSPLIYAVDCTNIAITGV-GII 149
Query: 233 DGQGALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISS 268
DG+G W+ F G+ + RP +++F+ NI + +
Sbjct: 150 DGEGGKIWKSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRPQMIQFLNCKNILVEN 209
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+ + NSP W +H + S NI V+GI+ + + N DGI+P+ + IE+ +GDD V
Sbjct: 210 VRIENSPFWCLHLLKSQNITVRGISYKS--LNYNNDGIDPEYAKDVLIENVTFDNGDDNV 267
Query: 329 AVKSGWDEYGIA-YGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINT 386
A+K+G D G A P++ +VIR C + +GSEMS G+Q+V E+ K A
Sbjct: 268 AIKAGRDHEGRANTASPSENIVIR--NCNFKGLHGVVIGSEMSAGVQNVFVENCKTAGYL 325
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
+ G+ +KT RGGY+K+++V+ + + ++ ++T NY + + I I++
Sbjct: 326 KRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYITANYHGEGEGYQSD-----ISNIHF 380
Query: 447 RDIVADNVSMAA-RLEGISGDPFTGICIANATIGMA 481
+I + S + ++G S I + N I A
Sbjct: 381 SNITCNRASESGIVIQGFSDKKIRSISLNNIDIKEA 416
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 189/388 (48%), Gaps = 52/388 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + + +AIN+ + S +GG + VP G + TG L S+ ++
Sbjct: 50 ITDFGAQPD---TPDEPCHEAINRAILTCSLNGGGTVVVPKGTFHTGPITLKSNVNFHVE 106
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D R LI+ T++ +TG GTIDGQG+
Sbjct: 107 EGAVLKFSTDQSLY--FPAVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGS 161
Query: 238 --LWW---------------QQFHKGKLKY--------------------TRPYLMEFMY 260
WW Q + G+ + RP L+
Sbjct: 162 NETWWPMCGASRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMKPEDGMRPQLINLYS 221
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ + I +TLLNSP W +HP++ +++V+G+ + PN DG +P+SC N IE+C
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFN--RGPNGDGCDPESCKNVLIENCT 279
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG ++ G + +P++ +++R + + + +GSE+SGG +++ E+
Sbjct: 280 FDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGHGG-VVIGSEISGGYRNLFVEN 338
Query: 381 IK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ + + + +RIKT+ RGG +++++VR +T+ + A + N +
Sbjct: 339 CRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENREKCNRGYA 397
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGD 466
P ++ ++ +++ + + + G+ D
Sbjct: 398 PTVRNVHLKNVTCEKSKLGVLIIGLDDD 425
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 187/388 (48%), Gaps = 52/388 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + +AINQ + +GG + VP G + TG L S+ ++
Sbjct: 50 ITDFGAKPDTPDA---PCHEAINQAIVTCCLNGGGTVVVPKGTFYTGPITLKSNVNFHVE 106
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D R LI+ T++ +TG GTIDGQG+
Sbjct: 107 EGAVLKFSTDQSLY--FPGVITRWEGIDCYNAR--PLIYAYGETNIAITG-KGTIDGQGS 161
Query: 238 --LWW---------------QQFHKGKLKYT--------------------RPYLMEFMY 260
WW Q + G+ + RP L+
Sbjct: 162 NETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYS 221
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ + I +TLLNSP W +HP++ ++ V+G+ + PN DG +P+SC N IE+C
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPESCKNVLIENCT 279
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG ++ G +G+P++ +++R + + +GSE+SGG +++ E+
Sbjct: 280 FDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVEN 338
Query: 381 IK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
K + + + +RIKT+ RGG +++++VR +T+ + A + N + +
Sbjct: 339 CKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRENCNRGFT 397
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGD 466
P ++ ++ +++ + + + G+ D
Sbjct: 398 PTVRNVHLKNVTCEKSKLGVLIIGLDDD 425
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 168/372 (45%), Gaps = 49/372 (13%)
Query: 151 GAQLYVPAGKWLTGSFNLISH-FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAG 209
G L + G W TG + H +++HKDA ++ + ++ +P Y R
Sbjct: 33 GGCLSIGPGTWRTGPITISGHDIEVHIHKDAKIVFIPEEGKY-----IPVYSRWEGINCY 87
Query: 210 RYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-QFHKGKLK------------------- 249
++ N V + G+ GT+ G G WW K LK
Sbjct: 88 CMHPCLYILNSHRVTIQGE-GTLYGSGHYWWDLSLGKRNLKMEPATETEKRFALLNPGYK 146
Query: 250 ------------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+ RP L++ + +I + +TL +SP W +HP+YS N++ + ++I P
Sbjct: 147 SQGGGGGGRQSQFLRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIKNP 206
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
+PNTDGI+ DSC N IE C I GDD +A+KSG GI G PTK + I + T +
Sbjct: 207 KNAPNTDGIDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTVRN 266
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
+ + +GSE + GI +V + T+ G+RIKT GRGG + + G+ M
Sbjct: 267 AHGGAV-IGSETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLC 325
Query: 418 AFWMTGNY--GSHADNHYDPKALPV------IQGINYRDIVA-DNVSMAARLEGISGDPF 468
+ Y GS ++ + + LPV + I D A +S A + G+ P
Sbjct: 326 PLTINLYYRCGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLSSIAFIVGLPESPI 385
Query: 469 TGICIANATIGM 480
TG+CI + T +
Sbjct: 386 TGLCIEDCTFSL 397
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 188/377 (49%), Gaps = 47/377 (12%)
Query: 133 TKAFKDAIN-QLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFLLASQDLNE 190
K + AIN +++ S +GG Q+ VP GK+ + G S+ LYL + A L+ S D +
Sbjct: 61 VKDSRPAINTAITKCSDEGGGQVTVPPGKYFIKGPIIFKSNVNLYLSEGAELIFSHDEKD 120
Query: 191 WPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQQFHK 245
+ LP+ R Y+ LI+ + ++ +TG G ++GQG A W + K
Sbjct: 121 Y-----LPAVLTRWEGTEVFNYSPLIYAYQVENIAITG-KGILNGQGSKNIANWKPEQKK 174
Query: 246 --------------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSS 285
G+ RP +E + NI I + ++++ W +HP+ +
Sbjct: 175 DQALIRKMGREGAPVYNRLFGEKHKLRPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCN 234
Query: 286 NILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPT 345
N+ V+ ++I + + N+DG +P+S TN +E+C+ +GDD +A+KSG D+ G G PT
Sbjct: 235 NVTVRNVSIDS--FNANSDGFDPESTTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPT 292
Query: 346 KQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+ +++R T S ++ + +GSE+SGG+++V E+IK + + K+ + RGGY+++
Sbjct: 293 ENIIVRNSTFES-LASGVCIGSEISGGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENT 351
Query: 406 YVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAAR----LE 461
++R + M ++ A +Y S + +Y + N I N + A+R +
Sbjct: 352 WIRNVNMDSVGTAIRFDPDYKSESKENYATR-------FNNFTIENINCAYASRSGIEVN 404
Query: 462 GISGDPFTGICIANATI 478
G P T + + N I
Sbjct: 405 GFKDMPITNVALKNVRI 421
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 190/395 (48%), Gaps = 48/395 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYL 176
++TD+G D + A +AIN+ +Q +GG + +PAG + + G+ L S+ L++
Sbjct: 50 NVTDYGAKNDTAFDSRPAILEAINKCNQ---NGGGTVLIPAGNYFIKGAITLKSNVNLHI 106
Query: 177 HKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ A L S +++ P++ + YT I+ T+V +TG GT+DG
Sbjct: 107 VEGARLEFSTAASDYLPMV-----LTKWEGTECFNYTPFIYAYQCTNVALTGK-GTLDGN 160
Query: 236 GALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTL 271
GA+ + +H G+ Y RP +++F N+ + + +
Sbjct: 161 GAVTFNGWHAKQGPAVDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVRI 220
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
+SP W +HPV+ +N+ V+ I I + + N DG +P+SCTN IE+ GDD +A+K
Sbjct: 221 FDSPFWIIHPVFCNNVTVRNIYIDS--NNYNNDGCDPESCTNVLIENMDFNVGDDGIAIK 278
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
SG D+ G G T+ ++IR C A I +GSE SGG+++V ED K + +G+
Sbjct: 279 SGRDQDGWRIGQATENVIIR--NCHFARWA-ITIGSETSGGVRNVYIEDCKIDSCRNGIY 335
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAF--WMTGNYGSHADNHYDPKALPVIQGINYRDI 449
K+ + RGGY +++ +R + W + T +G NH P + + I DI
Sbjct: 336 FKSNLDRGGYFENLNMRRIEADVCLWGVVNFRTNYHGYRGGNH--PT---LFRNICIEDI 390
Query: 450 VADNV-SMAARLEGISGDPFTGICIANATIGMAAK 483
+ V S+A G+ I + N + A K
Sbjct: 391 NCNRVDSVALMANGLPEAKLYNITLRNIKVKKAPK 425
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 194/415 (46%), Gaps = 69/415 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWL-TGSFNLISHF 172
A++TDF N FK A++ + Q + GG ++ VP G WL +G +L S+
Sbjct: 70 REANVTDF------LNENGSDFKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNI 123
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L + A + S + ++ KP + R Y+ LI+ +++ +TG GT+
Sbjct: 124 NLRIEAGATIRFSTNPEDY---KPY-VFTRWEGMELMGYSPLIYAFEQSNIAITGK-GTL 178
Query: 233 DGQGAL--WW------------------QQFHKGKLK-----------------YTRPYL 255
DG A WW Q++ + L+ Y RP
Sbjct: 179 DGSAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPF 238
Query: 256 MEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTR 315
++ +N+ I +T+L SP W V+PV N+ V + PN+DG +P+SCTN
Sbjct: 239 IQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVL 296
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQD 375
I +C +GDDC+A+KSG + G +P +VI + + + +GSE+SGG+++
Sbjct: 297 ISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGG-VVIGSEISGGVEN 355
Query: 376 VRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSH 428
+ A+ + + + + G+RIKT RGG++K++ R + + T+K A F+ G+ G
Sbjct: 356 LYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAG-- 413
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
K P+++ I ++ + + A L G P +G+ + N TI A K
Sbjct: 414 -------KFPPLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIKRALK 461
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 196/407 (48%), Gaps = 64/407 (15%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+ SI DFG + ++ A + AI + +S GG + VPAG++ TG +L S+ L+
Sbjct: 61 TKSIKDFGAKPGKQNDSSMAIRAAI---ADVASAGGGTVLVPAGEFYTGPVHLESNINLH 117
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ + A L + + KP + R + LI+ T+V VTG G ++G
Sbjct: 118 IAQGAVLHFYPEPERY---KPY-VFTRWEGTELMGLSPLIYAFEKTNVAVTG-KGILEGG 172
Query: 236 GA--LWW------------------QQFHKGKLK-----------------YTRPYLMEF 258
G+ WW Q+F + L+ Y RP ++
Sbjct: 173 GSHTHWWPWKGKWKEAEWGDHPVENQKFTRDPLREMAENEVPVAQRVFDDNYLRPPFIQP 232
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+ N+ I +T+ NSP W V+PV N+ VQGI + PN+DG +P++C + I++
Sbjct: 233 IRCKNVLIEGVTIKNSPFWLVNPVLCENVTVQGIHCES--YGPNSDGCDPEACKDVLIQN 290
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG + G G+ ++ ++I + + + +GSE+SGG++++
Sbjct: 291 CIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQMKAGHGGVV-IGSEISGGVRNLYV 349
Query: 379 E--DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHADN 431
+ ++ + + + G+RIKT RGG++K++ R + + +K A ++ G+ G
Sbjct: 350 DNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEGDVG----- 404
Query: 432 HYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
K PV++ I ++ ++ + A L G P TG+ + N T
Sbjct: 405 ----KFTPVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTF 447
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 63/355 (17%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
+++ S+ DFGG GDG T NT A + ++ ++ GG ++ VP G W TG L +
Sbjct: 44 SNTVSVADFGGSGDGHTLNTAA---FADAIAALAARGGGRVVVPEGVWYTGPIELKDNTE 100
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L+L ++A ++ S D +P+++ + G + R S I + +V +TG G ID
Sbjct: 101 LHLEQNAVIVFSDDKTLYPLVE---TTFEGLNTL--RCQSPISARGVKNVAITG-RGVID 154
Query: 234 GQGALW------------WQQFHK--------GKLKY----------------------- 250
G G W W+ + GK Y
Sbjct: 155 GNGDAWRAVKQDKLNPRQWKTLVRSGGVLSDDGKTWYPSESYKFGATSGADQNVSTWAKT 214
Query: 251 ----------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
RP ++ + +N+ + + NSP WN+HP +N++V IT+ P +
Sbjct: 215 RADFERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYA 274
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
N DGI+ +SC N + + GDD + +KSG D+ G G+P + +++ +
Sbjct: 275 QNGDGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIVFHGHG 334
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ +GSEMSGG+++VR + T+ G+R K+A GRGG V++I++ + M+ +
Sbjct: 335 GFV-VGSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNI 388
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 40/409 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ FG GDG + +T + AI S ++ +PAG + S L S ++ L
Sbjct: 84 NVRKFGAKGDGVSDDTTFIQAAIMACPPES-----RVLIPAGTYKITSLFLKSGISVELA 138
Query: 178 KDAFLLASQDLNEWPVIKPL-PSYGRGRDAAAGR--------YTSLIFGTNLTDVIVTGD 228
K A LLA D + + ++ L SY D G + +I G +++DV + G+
Sbjct: 139 KGAELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLPMFAGIISGIDVSDVNLYGE 198
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G+I+G + WW+ K + RP ++ NI++ L +SP+W +HP +S
Sbjct: 199 -GSINGAASHENWWKN-EKVMVGAFRPRMLSLNRCRNIRVQGLYFHDSPAWVIHPYFSDE 256
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+L + + P SPNTDG++P+SC + I GDDC+AVKSG G Y P+
Sbjct: 257 LLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRRYKTPSS 316
Query: 347 QLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG--GYVK 403
+ + + C+ + + +GSEM+GG+ ++ E + +T+ G+RIKT GRG +
Sbjct: 317 NIHVYQ--CLMEHGHGAVTVGSEMAGGVNNLIVEKCRFYHTDRGLRIKTRRGRGKDAILD 374
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYD----------PKALPVIQGINYRDIVADN 453
+I R + M + F Y D + P ++ + +I A +
Sbjct: 375 NIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREPYPVDDGTPSMKRFCFENITAKD 434
Query: 454 VSMAAR-LEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGV 501
+AA +G+ I + N ++ A + K D+ M++GV
Sbjct: 435 CHVAASYFDGLPEQKIEQITMRNVSVSFAGQAK------CDVPIMSNGV 477
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 179/375 (47%), Gaps = 50/375 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG D T + + ++ + +GG + +P G + TG + S+ L+L
Sbjct: 64 NIKDFGATTD--TPDQPCHEQINLAITTCNQEGGGTVVIPKGTFYTGPITMKSNVNLHLE 121
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + G D R LI+ +++ +TG GTIDGQG+
Sbjct: 122 EGATLKFSTDQKLY--FPGVITRWEGLDCYNAR--PLIYAYGESNIAITGK-GTIDGQGS 176
Query: 238 --LWW-----------QQFHKGKL------------------------KYTRPYLMEFMY 260
WW + H KL RP L+ F
Sbjct: 177 NETWWPMCGAAHYGWKEGMHSQKLGSRERLMGYAELKRPIYERAMTPEDALRPQLINFYL 236
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ I I +TLLNSP W +HP+ +++V+G+ I PN DG +P+SC N IE+C
Sbjct: 237 CNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYN--RGPNGDGCDPESCKNVLIENCR 294
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG +E G + P++ +++R + + + +GSE+SGG +++ E+
Sbjct: 295 FDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGHGG-VVIGSEISGGYRNLYVEN 353
Query: 381 --IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ + + +RIKT RGG V++++VR + + A + N + + +
Sbjct: 354 CVMDSPQLDRVIRIKTNDCRGGIVENVFVRNIKVGQCHEAV-LKINLLYESKENCNRAFP 412
Query: 439 PVIQGINYRDIVADN 453
P+++ ++ ++I +N
Sbjct: 413 PIVRNVHLKNITCEN 427
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 181/377 (48%), Gaps = 67/377 (17%)
Query: 90 SQRGAESRKARRLD-SFEYNAISCRAHSASITDFGGVGDGKTSNTKA-FKDAINQ-LSQY 146
S RG + ++++ S E I+ R + IT +G KTS + A + AIN+ ++
Sbjct: 18 SARGWNETEYKQIEQSIERPVIANR--TILITAYGA----KTSASAAQNQKAINRAIAVA 71
Query: 147 SSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDA 206
S GG + VP G W TG+ L SH L + + A L + + +P++ R A
Sbjct: 72 SMKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLYPLV---------RTA 122
Query: 207 AAG----RYTSLIFGTNLTDVIVTGDNGTIDGQGA--LWWQ------------------- 241
G Y+ I+ TD+ V+G GTIDG G+ WW
Sbjct: 123 WEGLECYNYSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQR 181
Query: 242 -----QFHK-------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
Q K GK RP L+ FM+ + I I + ++NSP W +HP+
Sbjct: 182 LGSRAQLQKYAEDGVPVEKRKFGKGCGLRPQLINFMHCERILIRDVKMVNSPFWVIHPLL 241
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
S NI V + I PN DG +P++C N I++C +GDDC+A+KSG + G +G
Sbjct: 242 SKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGK 299
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGVRIKTAVGRGGY 401
P+K ++IR + + +GSE+SGG ++V AED + + E +RIKT RGG
Sbjct: 300 PSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAEDCYMDSPELERVLRIKTNNCRGGL 358
Query: 402 VKDIYVRGMTMHTMKWA 418
+++I +R + + K A
Sbjct: 359 IQNINMRNVKVGQCKEA 375
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%), Gaps = 41/336 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYL 176
+I G GD + N KAF A ++ + G + VP G + + G + +S+ L L
Sbjct: 45 NILKLGAKGDSVSDNKKAFDKA---MALCKKNNGGTIIVPKGIYKINGPIHFVSNVNLKL 101
Query: 177 HKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
K A + S + ++ P++ L S+ Y+ LI+ N T++ ++G+ GTIDG+
Sbjct: 102 EKGAKIKFSDNPEDYLPMV--LTSW---EGTMLYNYSPLIYANNCTNIAISGE-GTIDGE 155
Query: 236 GALWWQQF----HKGKLK--------------------YTRPYLMEFMYTDNIQISSLTL 271
G W+ F ++GK + + RP +++F+ NI + ++ +
Sbjct: 156 GGKTWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENIRI 215
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
NSP W +H + S +I ++GI+ + + N DGI+P+ + IE+ +GDD VA+K
Sbjct: 216 ENSPFWCLHLLKSESITIRGISYKS--LNHNNDGIDPEYAKDVLIENVTFDNGDDNVAIK 273
Query: 332 SGWDEYGIAY-GMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESG 389
+G D G A P++ ++IR C + +GSEMS G+Q+V E+ K A + G
Sbjct: 274 AGRDHEGRANTATPSQNIIIR--NCNFKGLHGVVIGSEMSAGVQNVFVENCKTAGYLKRG 331
Query: 390 VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
+ +KT RGGY+K+I+VR + + ++ ++T NY
Sbjct: 332 IYLKTNADRGGYIKNIFVRNIQLDQVEDCLYITANY 367
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 190/420 (45%), Gaps = 60/420 (14%)
Query: 105 FEYNAISC----RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGK 160
FE AI + SI DFG V K ++A AI S+ + GG + +P G+
Sbjct: 37 FEMPAIKIPDFSKCKEFSIVDFGAVQGNKNKTSEAINKAI---SKANKAGGGVVVIPEGE 93
Query: 161 WLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTN 219
WLT + S+ L+L+K A LL S+ +++ LP+ + Y+ LI+
Sbjct: 94 WLTKKIHFKSNVNLHLNKGAVLLFSETPDDY-----LPAVNSTWEGYECYNYSPLIYAYK 148
Query: 220 LTDVIVTGDNGTIDGQGALWWQQF-----HKGKLK----------------------YTR 252
++ +TG+ G + + +W + F H LK + R
Sbjct: 149 CKNIAITGE-GELKAKMDIWKEWFARPKAHMESLKRLYFLASYNKPMKERQMVNDSAHFR 207
Query: 253 PYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCT 312
P ++F +NI + +T+ NSP W +HP S +++++ + + A N DG++P+
Sbjct: 208 PQFIQFNRCENILMDGVTITNSPFWTIHPFLSKDVVLRNLKVYA--HGHNNDGVDPEMSQ 265
Query: 313 NTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG 372
N IE+C GDD +A+KSG ++ +K +V+R T + + +A+GSE+SGG
Sbjct: 266 NVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCTVKNGHQ-LVAIGSELSGG 324
Query: 373 IQDVRAEDIKAIN---TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
I++V ++ ++ + IKT RGGYV +IY+ + + G G
Sbjct: 325 IENVFIDNCTVVDGAKLNHLLFIKTNERRGGYVSNIYMSNIVSGKID-----AGILGIDT 379
Query: 430 DNHYD--------PKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMA 481
D Y + L I+ I +I A NV +++ G P I + N T+ +
Sbjct: 380 DVLYQWRDLVPTIERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVV 439
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 170/370 (45%), Gaps = 29/370 (7%)
Query: 151 GAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGR 210
GA LYVP G W TG L S +++ + A + D + +++ + GR + + G
Sbjct: 115 GATLYVPPGIWRTGPVFLKSGLFVHVPEGATIKGVADRGAYRMLEAFGADGRQQASWEGV 174
Query: 211 ----YTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNI 264
Y SL+ + V + G G IDG GA WW+ + + RP + +
Sbjct: 175 PARCYGSLLTAIDADGVTIAG-KGVIDGAGAEGDWWEWPKETREGARRPRTVFANRCTQL 233
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
++S LT+ NSPSW +HP+ + + + I P SPNTDG+NP+S T+ I G
Sbjct: 234 KMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSVG 293
Query: 325 DDCVAVKSG--WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK 382
DDC+A+K+G W + + PT+ + +R + + +GSEMSG + DV
Sbjct: 294 DDCIAIKAGKIWPDGTVP--APTRNVSVRHCLMERGHGGVV-IGSEMSGSVTDVTVAFCT 350
Query: 383 AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP------- 435
+T+ G+RIKT GRGG V I + M +K + +Y D D
Sbjct: 351 MRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRAPA 410
Query: 436 ---KALPVIQGINYRDIVADNVSMA-ARLEGISGDPFTGICIANATIGMAAKHKKVPWTC 491
A P I I + N A A + G++ P +G+ IA+ ++ A P
Sbjct: 411 PVSAATPKIGDIRFERTEVKNAHHALAYVLGLAEAPVSGLTIADVSVTYA------PEAV 464
Query: 492 ADIGGMTSGV 501
AD+ M G+
Sbjct: 465 ADVPDMALGL 474
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 188/403 (46%), Gaps = 47/403 (11%)
Query: 112 CRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISH 171
RA D+G GDG T+NT A + AI+ ++ G + +G +LTGS L S
Sbjct: 20 ARAAEFRANDYGAKGDGVTANTVAIQSAIDAAAKT----GGTIVFASGVYLTGSIFLKSG 75
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
L + K + QD +PV +P+ G + +LI ++V ++G G
Sbjct: 76 TRLRVDKGVEIRGMQDQAAYPV---MPTRIAGIEMKWP--AALINVYEQSNVKISG-QGV 129
Query: 232 IDGQGALWWQQFHKGKLKYT-------------RPYLMEFMYTDNIQISSLTLLNSPSWN 278
IDG G +WW ++ + + Y RP L++ +DN+++ LTL S W
Sbjct: 130 IDGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKSDNVELQGLTLRRSGFWT 189
Query: 279 VHPVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
VH YS + V G+TI + P+TDGI+ DS ++ +++ I DD + +K+G D
Sbjct: 190 VHICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRDA 249
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN-TESGVRIKTA 395
G+ PT+ +VI +T + +A I GSE SGGI+ V A I + + G+ K+A
Sbjct: 250 DGLRVNRPTENVVIHDVT-VRDGAAGITFGSETSGGIRHVEAYRIHVLAPSPIGILFKSA 308
Query: 396 VGRGGYVKDIYVRGMTMHTMKWAFWMTGNYG------------SHADNHYD------PKA 437
RGG V+DI + + M + AF + N+ + ++Y P+A
Sbjct: 309 ATRGGTVEDISIHDIDMRNVPTAFSVNFNWNPNYSYAKIPQGLQNVPDYYKVMTQEVPRA 368
Query: 438 --LPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LP ++ I +I A + A + + P G+ N I
Sbjct: 369 QGLPHLKNIRISNIKASGSTQAFSVGAYADAPLQGVTFRNIDI 411
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 186/410 (45%), Gaps = 63/410 (15%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A +I DFG +G+ T+A AI + GG Q+Y+P G + TG+ +L+S+
Sbjct: 44 AKQFNIKDFGAKENGQYDCTQAINSAIEACH---AQGGGQVYIPDGTYFTGAIHLLSNVN 100
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L +A + S D + LP + R Y+ LI+ ++ +TG GT+
Sbjct: 101 LHLSDNAIVSFSTDPTHY-----LPEVFTRWEGLEMMGYSPLIYAFEQENIAITG-KGTL 154
Query: 233 DGQG--ALWW------QQFH-------KGKL----------------------------K 249
G G WW ++ H +GK+
Sbjct: 155 QGNGDNQTWWPWKGPHKEGHWDLIKDSQGKVLHQREARDQLMVDAEAGVPVSERIYSTGA 214
Query: 250 YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPD 309
Y RP ++ NI I +T+ NSP W ++PV ++ V + + PN+DG +P+
Sbjct: 215 YLRPPFIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNFSS--HGPNSDGCDPE 272
Query: 310 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEM 369
SC + I++C +GDDC+A+KSG + G G+P++ +VI + + +GSE+
Sbjct: 273 SCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCHMKEGHGGVV-IGSEI 331
Query: 370 SGGIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGS 427
SGG+ +V ++ + + + E +RIKT RGG ++ I +R + + T+K A + Y
Sbjct: 332 SGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYYEE 391
Query: 428 HADNHYDPKALPVIQGINYRDIVADNV-SMAARLEGISGDPFTGICIANA 476
+D P ++ I ++ NV S A L G P I N
Sbjct: 392 GDAGQFD----PTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKNC 437
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 35/295 (11%)
Query: 150 GGAQLYVPAG-KWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAA 207
GG + + G +L G+ L S L+L KDA+LL S +++ LP + R
Sbjct: 552 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 606
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQ-------QFHK----------- 245
++ +I+ + T++ +TG GTID QG A W Q + K
Sbjct: 607 LYGHSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTER 665
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
GK RP ++FM I + +T+ NSP W +HPVY N++V+ ITI + PN
Sbjct: 666 IFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY--PNN 723
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG +P+S +N IE+C +GDD +A+K+G D G G P+K +VIR S + +
Sbjct: 724 DGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNG-L 782
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+GSEMSGG++++ ++I+ ++ + K+ RGGY+++I V +T+ K A
Sbjct: 783 CIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 837
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 188/411 (45%), Gaps = 48/411 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLYLH 177
+TDFG VGDG+T + A ++ +DGG ++ +P G W + G +L SH L++
Sbjct: 58 VTDFGAVGDGRTDSHDA---ITAAIAAAHTDGGGRVVLPEGTWRSDGPLHLESHIELHVS 114
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG-- 234
A L+ D ++ LP+ + R Y+ LI+ ++ DV +TG NG IDG
Sbjct: 115 DGAHLIFGPDPADY-----LPAVHTRWEGTEMYGYSPLIYAHDVHDVAITG-NGVIDGNP 168
Query: 235 --QGALW--------------------WQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLL 272
+ W +Q G+ + RP +++ + + ++ T+
Sbjct: 169 DSEFHTWTDKQDADVQALRRMGFDGVPLEQRQFGEGHHLRPSMIQIFDAERVLLADYTVR 228
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W H VY+ + +V+G+T+ + +PN DG++ DS T+ IE +GDD V VKS
Sbjct: 229 NSPFWINHLVYTDDAVVRGLTVDS--HNPNNDGVDVDSSTDVLIEHNTFRTGDDSVVVKS 286
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D+ G G P++ +V+R IALGSEMSGGI V D + + +R
Sbjct: 287 GRDKDGRDIGRPSRNVVVRHNDMGG--EDGIALGSEMSGGISHVYFTDNTLRSGAAAIRF 344
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVAD 452
K + RGG V+ I VR + + + W +Y + PV + I + D
Sbjct: 345 KGNLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGELGGDF----PPVYRDIVFSDFTVT 400
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT-SGVT 502
+ + G P + + N T+ H P ++ +T GVT
Sbjct: 401 SADTLLEIHGPDAAPLRDVTLRNITVA----HTDTPMILDNVEDLTFDGVT 447
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 35/295 (11%)
Query: 150 GGAQLYVPAG-KWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAA 207
GG + + G +L G+ L S L+L KDA+LL S +++ LP + R
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQ-------QFHK----------- 245
++ +I+ + T++ +TG GTID QG A W Q + K
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTER 682
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
GK RP ++FM I + +T+ NSP W +HPVY N++V+ ITI + PN
Sbjct: 683 IFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY--PNN 740
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG +P+S +N IE+C +GDD +A+K+G D G G P+K +VIR S + +
Sbjct: 741 DGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNG-L 799
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+GSEMSGG++++ ++I+ ++ + K+ RGGY+++I V +T+ K A
Sbjct: 800 CIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 35/295 (11%)
Query: 150 GGAQLYVPAG-KWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAA 207
GG + + G +L G+ L S L+L KDA+LL S +++ LP + R
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQ-------QFHK----------- 245
++ +I+ + T++ +TG GTID QG A W Q + K
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTER 682
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
GK RP ++FM I + +T+ NSP W +HPVY N++V+ ITI + PN
Sbjct: 683 IFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY--PNN 740
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG +P+S +N IE+C +GDD +A+K+G D G G P+K +VIR S + +
Sbjct: 741 DGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNG-L 799
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+GSEMSGG++++ ++I+ ++ + K+ RGGY+++I V +T+ K A
Sbjct: 800 CIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 35/295 (11%)
Query: 150 GGAQLYVPAG-KWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAA 207
GG + + G +L G+ L S L+L KDA+LL S +++ LP + R
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQ-------QFHK----------- 245
++ +I+ + T++ +TG GTID QG A W Q + K
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTER 682
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
GK RP ++FM I + +T+ NSP W +HPVY N++V+ ITI + PN
Sbjct: 683 IFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY--PNN 740
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG +P+S +N IE+C +GDD +A+K+G D G G P+K +VIR S + +
Sbjct: 741 DGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNG-L 799
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+GSEMSGG++++ ++I+ ++ + K+ RGGY+++I V +T+ K A
Sbjct: 800 CIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 174/366 (47%), Gaps = 51/366 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLYLH 177
IT FG D + A AIN ++ GG ++ +PAGKWL+ G L S L+L
Sbjct: 60 ITAFGASADAQADARPAIMRAINAAAKA---GGGRVVIPAGKWLSNGPVELQSRINLHLE 116
Query: 178 KDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A LL S + LP+ + R Y+ LI+ +TDV +TG GTIDG
Sbjct: 117 EGATLLFSAQTKHY-----LPAVFTRWEGTEIYGYSPLIYANKVTDVAITG-KGTIDGNA 170
Query: 237 A---LWW-----------------------QQFHKGKLKYTRPYLMEFMYTDNIQISSLT 270
L W +QF +G + RP L++ + + + + T
Sbjct: 171 QSEFLGWAKHQAADIAKLRQMGFDGVPLEKRQFGEGH--FLRPSLIQILNAERVLLQDYT 228
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
LNSP W H VY+ + V+G+ + + N DG++ DS +E+ + +GDD +A+
Sbjct: 229 ALNSPFWVNHLVYTDHAQVRGVKVDSMFA--NNDGLDIDSGRWILVENNHFRTGDDSIAI 286
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
KSG D G G P++ +V+R + + LGSEMSGGI++V D + S
Sbjct: 287 KSGRDLDGRTIGRPSENIVVR--NNLFDGEDGVGLGSEMSGGIKNVYFTDNDYLKGTSAF 344
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
R+K + RGG V+ + +R M + + K+ FW +Y + Y P Y+DIV
Sbjct: 345 RLKANLDRGGSVEHVRIRNMKIGSAKYLFWFDLSYVA----GYLGGNFPS----RYQDIV 396
Query: 451 ADNVSM 456
+N+++
Sbjct: 397 FENITV 402
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 35/295 (11%)
Query: 150 GGAQLYVPAG-KWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAA 207
GG + + G +L G+ L S L+L KDA+LL S +++ LP + R
Sbjct: 571 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 625
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQ-------QFHK----------- 245
++ +I+ + T++ +TG GTID QG A W Q + K
Sbjct: 626 LYGHSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTER 684
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
GK RP ++FM I + +T+ NSP W +HPVY N++V+ ITI + PN
Sbjct: 685 IFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY--PNN 742
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG +P+S +N IE+C +GDD +A+K+G D G G P+K +VIR S + +
Sbjct: 743 DGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNG-L 801
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+GSEMSGG++++ ++I+ ++ + K+ RGGY+++I V +T+ K A
Sbjct: 802 CIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 856
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 35/295 (11%)
Query: 150 GGAQLYVPAG-KWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAA 207
GG + + G +L G+ L S L+L KDA+LL S +++ LP + R
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQG----ALWWQ-------QFHK----------- 245
++ +I+ + T++ +TG GTID QG A W Q + K
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTER 682
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
GK RP ++FM I + +T+ NSP W +HPVY N++V+ ITI + PN
Sbjct: 683 IFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY--PNN 740
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG +P+S +N IE+C +GDD +A+K+G D G G P+K +VIR S + +
Sbjct: 741 DGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNG-L 799
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+GSEMSGG++++ ++I+ ++ + K+ RGGY+++I V +T+ K A
Sbjct: 800 CIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 34/326 (10%)
Query: 112 CRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISH 171
C H+ +G DGKT +T A + AI + + + + G +L+G L S
Sbjct: 24 CDPHA-----YGAKADGKTKDTAAIQKAI----EICAPKHGTVILKGGTFLSGPLTLRSD 74
Query: 172 FTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG---D 228
TL + K A LL S+D++++P+ R+ A R +L+ +++++ VTG +
Sbjct: 75 LTLEIDKGATLLGSRDIDDYPL----------REDAKWRRVALLHADHVSNLRVTGGKTE 124
Query: 229 NGTIDGQGALWWQ--QFHK------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G IDG G ++W+ + H+ G Y RP L++ + ++ +TL NSP +N+
Sbjct: 125 GGIIDGSGDIFWEMARTHRVPNDTSGSGGYPRPMLVDITESQHLTFDHITLQNSPMYNLT 184
Query: 281 PVYSSNILVQGITIIAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
+ I + I P T PNTDGI+P S N I I +GDD +A+KSG E
Sbjct: 185 FFFCDGIKIDHTIIRNPAKTGPNTDGIDPFSSKNIEISYVDIDTGDDDIALKSGLVERDP 244
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
G P + + I I + +++GSE++GGI DVR E+I NT++GVRIK+ RG
Sbjct: 245 KIG-PVEHVYIH--DSIFRHGHGLSVGSELAGGISDVRVENIVMENTDAGVRIKSNRTRG 301
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNY 425
+ D++ + + M + +T Y
Sbjct: 302 NDIHDLHYKNIQMTGVGQPIQITEYY 327
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 55/337 (16%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
+I DFG D + +AINQ + + +GG + VP G + TG L S+ L++
Sbjct: 49 NIMDFGAKPDTPDA---PCHEAINQAIMACNQEGGGTVLVPEGTFYTGPITLKSNVNLHV 105
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S D + + + + G D LI+ T++ +TG G IDGQG
Sbjct: 106 SEGAVLKFSTDQDLY--FPAVITRWEGLDCYNAH--PLIYAYGETNIALTG-KGVIDGQG 160
Query: 237 AL--WWQQFHKGKLKY-------------------------------------TRPYLME 257
+ WW + G +Y RP L+
Sbjct: 161 SNENWW--YMCGAPRYGWKEGMRSQKLGSRERLMGYAELKRPIYERVMTPEDGLRPQLIN 218
Query: 258 FMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIE 317
F + + I +TLLNSP W +HP++ +++V+G+ I PN DG +P+SC N IE
Sbjct: 219 FYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFN--RGPNGDGCDPESCKNVLIE 276
Query: 318 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
+C +GDDC+A+KSG +E G + +P++ +V+R + + + +GSE+SGG +++
Sbjct: 277 NCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGHGG-VVIGSEISGGYRNLY 335
Query: 378 AED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
ED + + + +RIKT+ RGG +++++VR + +
Sbjct: 336 VEDCVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKV 372
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 156/306 (50%), Gaps = 31/306 (10%)
Query: 126 GDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLAS 185
GDG+T + A + AI+ +S + GG ++Y G +LTGS L S TL + + L
Sbjct: 14 GDGRTDCSNAIQRAIDTVS---ASGGGKVYFRPGIYLTGSIFLKSGVTLEIGEGVELRGI 70
Query: 186 QDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF-- 243
D +P I + G + AG LI +V +TG GTIDGQG WW ++
Sbjct: 71 IDETAYPDIWTRVA-GIEMEWPAG----LINVIGQANVTITG-KGTIDGQGFYWWNKYWG 124
Query: 244 ----------HKGK-LKYT------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
+ GK L++ RP + + + + LTL SP WNVH YS++
Sbjct: 125 EDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFWNVHICYSTD 184
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ V G+ +I P+TDGI+ DS N IE+C I DD + +K+G D G+ P++
Sbjct: 185 VYVSGL-VIKDNEGPSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSE 243
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+V+R C A + +GSE SG I++V IKA T+ G RIK+A+ RGG +++I
Sbjct: 244 NIVVR--NCSIGSGAGVTIGSETSGSIRNVEIYQIKANGTDGGFRIKSALTRGGVIENIR 301
Query: 407 VRGMTM 412
V M
Sbjct: 302 VHDFEM 307
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 203/459 (44%), Gaps = 66/459 (14%)
Query: 82 LLIVVALLSQRGAESRKARRLD----SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFK 137
+L+ LL + SR + L + + I C ++ ++ DFG GDG NT+AF
Sbjct: 11 VLVYAFLLHAQTDYSRYYQNLPKPMPTVQAPVIPC--NTVNLKDFGATGDGTAMNTEAFS 68
Query: 138 DAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL 197
AI+ L++ GG +L VPAG WLTG +L + L+L ++A ++ S D + +
Sbjct: 69 KAISALNK---QGGGRLVVPAGIWLTGLISLKDNIDLHLERNAVIVFSPDKRDL-----I 120
Query: 198 PSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------------WQQF-- 243
P DA A I + +V +TG+ G IDG G W W Q+
Sbjct: 121 PVKDGKPDAKAA---PCIRASKRKNVSITGE-GIIDGNGEYWRPVKRGKVSDTEWNQYKA 176
Query: 244 ------HKGKLKY-------------------TRPYLMEFMYTDNIQISSLTLLNSPSWN 278
KG L Y R +L+ F N+ + +TL NSP ++
Sbjct: 177 MGGTITEKGDLWYPFNLKHLPNVADNYDAQEKMRTHLVRFTDCQNVLVQGVTLRNSPKFH 236
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+ P +N+++ + +I P + N D I+ +C N I + I +GDD + +K G + G
Sbjct: 237 LVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNCKNVLIVNNTIDAGDDGICMKGGVGQKG 296
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ G P + + I+ + + +GSE GG++++ + T++G+R K+ VGR
Sbjct: 297 VKDG-PCENINIQDNIVYHAHGGFV-IGSEFCGGMKNIFVHNNTFAGTDTGLRFKSGVGR 354
Query: 399 GGYVKDIYVRGMTMHTMK-WAFWMTGNY-----GSHADNHYDPKALPVIQGINYRDIVAD 452
GG DIY+ + M +K A +Y G+ A + P I+ D+V
Sbjct: 355 GGTTSDIYISKIYMTDIKDEAIVFQCDYVDRAVGAKAQTNKPTSFSPNFTDIHISDVVCY 414
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTC 491
+ G G GI ++N+TI K + C
Sbjct: 415 GAKTGIKATGAKG-MIHGIEVSNSTIIYTKTDKAIDPEC 452
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 54/384 (14%)
Query: 147 SSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRD 205
++ GG ++ +PAG++LTG +L S+ L+L + A +L + D + + PV+ SY G +
Sbjct: 93 NAAGGGRVLIPAGRFLTGPIHLKSNVNLHLEEGAEVLFTTDKSAYLPVVHT--SY-EGME 149
Query: 206 AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW------QQFHK------------ 245
Y+ LI+ ++ VTG GT +GQ WW + HK
Sbjct: 150 IM--NYSPLIYAKGQKNIAVTGK-GTFNGQADKENWWPWCGAERYGHKEGAPKQKDDHNI 206
Query: 246 ------------------GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
G+ RP +E + +N+ I +T N+P W +HP+ S +
Sbjct: 207 PALFTMIEDGTPVEERIFGEGHQLRPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYV 266
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
V G+T+ + PN DG +P+ I +C +GDDC+A+KSG + G +P++
Sbjct: 267 TVDGVTVNS--HGPNNDGCDPEYSKYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSEN 324
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQD--VRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+V+ + + +GSE+S G+++ VR + + N + +RIKT RGG+V+++
Sbjct: 325 IVVENCDMKDGHGG-VVMGSEISAGVRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENV 383
Query: 406 YVRGMTMHTMKWAFWMTGN-YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARL-EGI 463
YV+ + + +K A YG + + + +P IQ IN ++ +N L +G
Sbjct: 384 YVKDIEVGQVKEAVLKINTYYGIYGKQ--EGEFIPTIQNINLENVTVENGGKYGLLIQGR 441
Query: 464 SGDPFTGICIANATIGMAAKHKKV 487
P TGI N TI A KV
Sbjct: 442 EEKPVTGISFKNVTIKNADTPLKV 465
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 48/394 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLH 177
+T++G D + A AINQ + +DGG + +PAG + + G+ L S+ L++
Sbjct: 53 VTEYGAKDDTAFDSRPAILKAINQCN---TDGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S + ++ P++ + Y+ I+ T+V VTG GTIDG G
Sbjct: 110 EGARLEFSTEAADYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVAVTG-KGTIDGNG 163
Query: 237 ALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
++ + +H G+ Y RP +++F N+ + L +
Sbjct: 164 SVTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGHYLRPCMIQFYGCKNVLVEDLKIY 223
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP W +HPV+ N+ V+ + I + + N DG +P+S TN IE GDD +A+KS
Sbjct: 224 DSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIEGMDFNVGDDGIAIKS 281
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D+ G G T+ ++IR C A I +GSEMSGG++++ ED K + +G+
Sbjct: 282 GRDQDGWRIGQATENVIIR--NCHFARWA-ITIGSEMSGGVRNIYIEDCKIDSCRNGIYF 338
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAF--WMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
K+ + RGGY +++ +R + W + T +G NH + + I D+
Sbjct: 339 KSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNH-----PTLFRNICIEDVT 393
Query: 451 ADNV-SMAARLEGISGDPFTGICIANATIGMAAK 483
+ V S+A G+ I + N T+ A K
Sbjct: 394 CNRVDSVALMANGLPEAKLYDITLRNITVKKAPK 427
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 153/314 (48%), Gaps = 35/314 (11%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
+T A + AIN S+ + +P G++LTG+ L S +L L A L+ SQDL ++
Sbjct: 19 STSAIQQAIN-----SAQENDVIVIPQGRFLTGALFLKSGVSLRLDAGAQLVGSQDLADY 73
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGT-NLTDVIVTGDNGTIDGQGALWWQQF------- 243
P+I + G D R+ + I + +V +TG GTIDGQG +WWQ+F
Sbjct: 74 PLINTRVA---GIDM---RWPAGIINIIDCENVSITG-TGTIDGQGVIWWQRFWGDDERS 126
Query: 244 ------HKGKLKYT------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
L++ RP + + NI + T S WN+H YS I V+
Sbjct: 127 GMVGDYSARGLRWVVDYDCQRPRNILVFESQNILLRDFTSRESGFWNIHLCYSRRIAVEA 186
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+ I + P+TDGI+ DSC RIE C + DD + +KSG + +VIR
Sbjct: 187 VQI-SNSAGPSTDGIDVDSCEQVRIERCIVSCNDDNICIKSGRGREAAQKARTARDIVIR 245
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
C + I LGSE SGGI+ V ED T G RIK+A RGG+++DI V+ +
Sbjct: 246 --GCTLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLR 303
Query: 412 MHTMKWAFWMTGNY 425
+ +++ + N+
Sbjct: 304 LTDVRFPVLIQLNW 317
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 177/386 (45%), Gaps = 59/386 (15%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
+T A + AIN Q + +P G++LTG+ L S +L L A L+ SQDL ++
Sbjct: 19 STSAIQQAINSAQQNDV-----IVIPQGRFLTGALFLKSGVSLRLDAGAQLVGSQDLADY 73
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGT-NLTDVIVTGDNGTIDGQGALWWQQF------- 243
P+I + G D R+ + I + +V +TG GTIDGQG +WWQ+F
Sbjct: 74 PLINTRVA---GIDM---RWPAGIINIIDCENVSITG-TGTIDGQGVIWWQRFWGDDERS 126
Query: 244 ------HKGKLKYT------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
L++ RP + + +I + T S WN+H YS I V+G
Sbjct: 127 GMVGDYSARGLRWVVDYDCQRPRNILVFESQSILLRDFTSRESGFWNMHLCYSRRITVEG 186
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
+ I + P+TDGI+ DSC R+E C + DD + +KSG + +VIR
Sbjct: 187 VQI-SNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGREAAQKARTARDIVIR 245
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
C + I LGSE SGGI+ V ED T G RIK+A RGG+++DI V+ +
Sbjct: 246 --GCTLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLH 303
Query: 412 MHTMKWAFWMTGN------YGSHADNHYDPK-------------ALPVIQGINYRDIVA- 451
+ +++ + N YG + P+ L + G+ +++ A
Sbjct: 304 LTDVRFPVLIQLNWFPQYSYGDRGNLSDKPEHWRKLAEGVEGEAGLTAVSGLTIKNMSAH 363
Query: 452 --DN--VSMAARLEGISGDPFTGICI 473
DN S A +EG P TG+ +
Sbjct: 364 RSDNKYFSRAFFIEGYPERPVTGLTL 389
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 167/365 (45%), Gaps = 49/365 (13%)
Query: 136 FKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVI 194
+ DAIN+ + SS GG + VP G++LT L S+ L+L L + D N + +
Sbjct: 31 YTDAINRAIEACSSQGGGTVLVPDGEFLTAPIRLKSNVNLHLSDSTILKFTTDYNLFETV 90
Query: 195 KPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WW-QQFHKG----- 246
R + LI+ ++ +TG G +DGQ + W+ +Q +G
Sbjct: 91 -----LTRIEGIDCHNISPLIYAYGENNIAITG-KGKLDGQASTDNWFAEQRIRGIKAEN 144
Query: 247 --------------------------KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
K RP + NI + T+ SP W +H
Sbjct: 145 GETVNEKTLLYQMKADSIPVKERVFEKANGIRPQFINLYKCKNILLEGFTINRSPFWLIH 204
Query: 281 PVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 340
P+ S N+ ++G+ + + PN DG +P+SC N IEDC +GDDC+A+KSG DE G
Sbjct: 205 PLLSENVTIKGVKMQS--HGPNNDGCDPESCENVLIEDCDFDTGDDCIAIKSGRDEDGRY 262
Query: 341 YGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG--VRIKTAVGR 398
+ +P K +++R + A +A+GSE++GG +V E+ + + E +RIK+ R
Sbjct: 263 WNIPCKNIIVRECR-MKDGHAGVAIGSEITGGCHNVWVENCRMDSPELDRIIRIKSNPMR 321
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA 458
GG V +++VR +T+ K + H D + LP+ + I+ +I +
Sbjct: 322 GGNVANVFVRNITVGECKQSILGIEQKYWHVD---EGPYLPLFENIHLENITSKKSQYVL 378
Query: 459 RLEGI 463
L+G
Sbjct: 379 HLDGF 383
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 26/339 (7%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG G+G+ +T + AI + ++ +P GK+ S L S+ L L
Sbjct: 84 NVRDFGASGEGERDDTVFIQAAI-----MACPPEGRVVIPPGKYRVTSLFLKSNSNLELE 138
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDA---------AAGRYTSLIFGTNLTDVIVTGD 228
+ A L+ P++ L S G+G ++ AA Y +L G +V + G
Sbjct: 139 EGAVLIYDGRPGRLPILPGLLS-GKGENSLALGSWEGEAADMYAALFTGCGAENVNLYG- 196
Query: 229 NGTIDGQGAL--WWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
G I G ++ WW + ++ + RP ++ + +I++ L PSW +HP + S+
Sbjct: 197 KGEILGGASMEDWWSEENRQSSPH-RPRMLFLTHCKHIRVQGLRFSMCPSWCIHPCFCSD 255
Query: 287 ILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + + II P SPNTDGINP+SC + I C+ GDDC+A+KSG +P
Sbjct: 256 LGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPGS 315
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGG--YVKD 404
+ IR+ + + + +GSE+S G+ V D NT+ G+RIKT GRG V
Sbjct: 316 HIQIRQCFMENGHGG-VTIGSEISSGVHHVTVRDCCFRNTDRGLRIKTRRGRGKSCVVDA 374
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYD----PKALP 439
+ + M + F + Y D D +ALP
Sbjct: 375 VLFENIHMEQVDTPFVLNCFYFCEPDGRSDYVQTKEALP 413
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 188/399 (47%), Gaps = 60/399 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
IT +G VGDG T NT A + AI + GG + VPAG+++TG+ +L L++ +
Sbjct: 70 ITQYGAVGDGTTKNTAAIRAAITACHRA---GGGHVLVPAGRFVTGAIHLRGGVDLHVSE 126
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
L S D ++ LP+ R Y+ ++ N V VTG+ G +DGQ
Sbjct: 127 GGILAFSPDPADY-----LPAVLTRWEGTECWNYSPFVYAHNQRGVAVTGE-GILDGQAR 180
Query: 237 -ALWWQQFHKGKLK--------------------------YTRPYLMEFMYTDNIQISSL 269
W + G L+ Y RP +++F ++ IS L
Sbjct: 181 RGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLFGAGHYLRPKMVQFNRCRDVLISDL 240
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
T+++ P W VHPV +N+ V+ IT+ + + NTDG++P++ I C + DDCVA
Sbjct: 241 TIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPEASRLVHITGCRFNTNDDCVA 298
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN---- 385
VK+G DE G G+P++ +V++ S I +GSEMSGG++ V AED + IN
Sbjct: 299 VKAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITVGSEMSGGVRRVFAEDCR-INPPDF 356
Query: 386 -----TESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNY-GSHADNHYDPKAL 438
+ V +K + RGG+V +YVR + + + ++ +Y G H
Sbjct: 357 PGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFVNMDYNGGEGGTH------ 410
Query: 439 PV-IQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
PV ++ I+ D RL G+ D G+ +A+
Sbjct: 411 PVSVRDIHLSHCRIDGARAVLRLVGLETDRLRGVHLAHC 449
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 157/327 (48%), Gaps = 33/327 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I FG G+ T A + AI+ + G + VP G++LTG+ L +H L
Sbjct: 17 NILAFGADASGQQLATAAIQHAIDIAAP-----GDTVVVPPGRYLTGALFLKNHLIFELQ 71
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL S++L ++P+ + + G D T +I DV V G +GTIDGQGA
Sbjct: 72 TGAVLLGSRELEDYPLRQTRVA---GIDMVWP--TGIINILQCHDVCVCG-SGTIDGQGA 125
Query: 238 LWWQQF-------------HKGKLKYT------RPYLMEFMYTDNIQISSLTLLNSPSWN 278
+WW +F + L++ RP + ++ +++S T S WN
Sbjct: 126 VWWHKFWGTDENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGFTSRESGFWN 185
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+H YS ++ + + + P+TDGI+ DS R+E C + DD + VK+G
Sbjct: 186 IHLCYSQHLYLHHLQV-ENSGGPSTDGIDIDSSQQVRVEHCRVSCNDDNICVKAGRGAEA 244
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
G + +VIR C + + I LGSE SGGI+ V E+I T G RIK+A R
Sbjct: 245 ERIGATARDIVIRE--CELLHGSGITLGSETSGGIEQVLIENITFSGTGVGFRIKSARNR 302
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GG+++ + V G+ M + + F N+
Sbjct: 303 GGFIRHVRVSGLQMTDVHYPFMFQLNW 329
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 188/426 (44%), Gaps = 50/426 (11%)
Query: 87 ALLSQRGAESRKARRLDSFEYNAISCRAHSASIT--DFGGVGDGKTSNTKAFKDAINQLS 144
A+ Q GA R + N ++ ++ T DFGG DGKT NT A + AI+Q S
Sbjct: 343 AIDPQSGALKRVGEAPAGRDANWVTTVTYAEHCTPEDFGGKADGKTLNTTAIQQAIDQCS 402
Query: 145 QYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGR 204
Q GG + + G+WL+G L S+ TL + + A L AS ++ V + R
Sbjct: 403 QR---GGGTVQLSPGRWLSGPLQLQSNITLQIDQGATLQASNQEGKF-VNAFIGHPARVN 458
Query: 205 DAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT------------- 251
+A I+ +N+ +V +TG WW Q K + +
Sbjct: 459 EA-------FIYASNVNNVAITGGGTLDGDGEKSWWPQALKIRAEVRGGNPKAFTDRFPG 511
Query: 252 --------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
RP+ +EF + +I L L NSP WN+ S++I VQ + I PV+SPNT
Sbjct: 512 IPLANGAPRPWFIEFNNVSHSKIEQLHLTNSPMWNIVIRNSADITVQNVRITNPVSSPNT 571
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG++ S N + + I +GDD +A+KS G+ G I + I
Sbjct: 572 DGMDIVSSRNITVSNMDIHTGDDNIAIKS-----GLVNGTAAASKDITIEDSVMRDGHGI 626
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTG 423
++GSE + GI V + +NTE+GVRIK+A RG + + +TM + +T
Sbjct: 627 SVGSETANGIGKVTINHVTFLNTENGVRIKSARDRGENIGPLIASHLTMTNVVTPVLVTN 686
Query: 424 NY----GSHADNHYDP-------KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGIC 472
+Y G+ P + P ++GI+ D++A S A G+ P +
Sbjct: 687 SYSGQAGAQGHTLTQPIETAAVTASTPKMKGIHISDLMATKASYAMIFSGLPESPVEDVT 746
Query: 473 IANATI 478
+ N I
Sbjct: 747 LNNIRI 752
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 188/408 (46%), Gaps = 59/408 (14%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A +T FG GDG+T N+ A AI + ++ VPAG++LTG+ +L S+
Sbjct: 43 ARDFDVTRFGARGDGQTLNSTAIARAIAACAAAGG---GRVVVPAGRFLTGAVHLRSNVN 99
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L+L A LL S D ++P++ + R Y+ L++ ++ +TG+ GT+D
Sbjct: 100 LHLQAGATLLFSTDPKDYPLV-----FTRWEGIELMNYSPLVYARQQRNIAITGE-GTLD 153
Query: 234 GQGAL--WW--------------------------------------QQFHKGKLKYTRP 253
GQG+ WW ++ G+ + RP
Sbjct: 154 GQGSARHWWSWKGPWGGTVDHGWREGMPDQRKARAILFEMAERRVPVEKRVFGEGSFLRP 213
Query: 254 YLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTN 313
++ +N+ I + L +P W +HPV N++V+G+ ++ PN DG +P+S
Sbjct: 214 AFVQPYDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPESVDG 271
Query: 314 TRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGI 373
IE C +GDDC+A+ SG +E G MP + ++IR + + +GS++SGG
Sbjct: 272 ALIERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCRMKEGHGGVV-VGSQISGGA 330
Query: 374 QDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM-KWAFWMTGNYGSHAD 430
+ + AE + + + +R K RGG +++ + R + + T+ + A NY A+
Sbjct: 331 RWIFAERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVSRAAVTCDFNYEEGAN 390
Query: 431 NHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
+ P+ ++ + + N + +G+ G P TG+ + + +
Sbjct: 391 GRFVPR----LRNVVIERLRTKNAARVLDSQGLPGAPVTGVTLRDCSF 434
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 185/385 (48%), Gaps = 52/385 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG D + +AINQ + +GG + VP G + TG L S+ ++
Sbjct: 50 ITDFGAKPDTPDA---PCHEAINQAIVTCCLNGGGTVVVPKGTFYTGPITLKSNVNFHVE 106
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D + + + + G D LI+ T++ +TG GTIDGQG+
Sbjct: 107 EGAVLRFSTDQSLY--FPGVITRWEGIDCYNAH--PLIYAYGETNIAITG-KGTIDGQGS 161
Query: 238 --LWW---------------QQFHKGKLKYT--------------------RPYLMEFMY 260
WW Q + G+ + RP L+
Sbjct: 162 NETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYS 221
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ + I +TLLNSP W +HP++ ++ V+G+ + PN DG +P+SC N IE+C
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPESCKNVLIENCT 279
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG ++ G +G+P++ +++R + + +GSE+SGG +++ E+
Sbjct: 280 FDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVEN 338
Query: 381 IK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
K + + + +RIKT+ RGG +++++VR +T+ + A + N + +
Sbjct: 339 CKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENRENCNRGFT 397
Query: 439 PVIQGINYRDIVADNVSMAARLEGI 463
P ++ ++ +++ + + + G+
Sbjct: 398 PTVRNVHLKNVTCEKSKLGVLIIGL 422
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 185/394 (46%), Gaps = 48/394 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLH 177
+TD+G D + A AI S +++GG + +PAG + + G+ L S+ L++
Sbjct: 53 VTDYGAKSDTTFDSCPAILQAI---SHCNTNGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S + ++ P++ + Y+ I+ T+V VTG GTIDG G
Sbjct: 110 EGARLEFSTEAADYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVAVTG-KGTIDGNG 163
Query: 237 ALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
++ + +H G+ Y RP +++F N+ + L +
Sbjct: 164 SVTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGHYLRPCMIQFYGCKNVLVEDLKIY 223
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP W +HPV+ N+ V+ + I + + N DG +P+SCTN IE GDD +A+KS
Sbjct: 224 DSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESCTNVLIEGMDFNVGDDGIAIKS 281
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D+ G G T+ ++IR C A I +GSEMSGG++++ ED K + +G+
Sbjct: 282 GRDQDGWRIGQATENVIIR--NCHFARWA-ITVGSEMSGGVRNIYIEDCKIDSCRNGIYF 338
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAF--WMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
K+ RGGY +++ +R + W + T +G NH P + + I D+
Sbjct: 339 KSNPDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNH--PT---LFRNICIEDVT 393
Query: 451 ADNV-SMAARLEGISGDPFTGICIANATIGMAAK 483
+ V S+A G+ I + N + A K
Sbjct: 394 CNRVDSVALMANGLPEAKLHNITLRNINVKKAPK 427
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 183/424 (43%), Gaps = 71/424 (16%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G DG T AF+ AI + GG +YVP G++ +G L S+ TL +
Sbjct: 32 NIADYGAKKDGSAPATDAFRQAIQAAK---AAGGGTIYVPPGRYTSGPIELFSNMTLDID 88
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS--LIFGTNLTDVIVTGDNGTIDGQ 235
A + E+PV + LP + RGR T LI GT + +V VTG G
Sbjct: 89 AGARV-------EFPVAE-LP-FTRGRYLGVETLTPMPLIGGTGVENVTVTGRGILTTGD 139
Query: 236 GALW----------WQQFHKGKLK------------------------------------ 249
W + + H G +
Sbjct: 140 YEAWRKAYPAAYQEYLKLHNGVISTGGSEAFSANGPRWDHLLKVLETGHRASEEEYRLAA 199
Query: 250 -YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
RP + FM N+ + + ++ +P + VH +Y+ N V+ + +I P+ + I
Sbjct: 200 AELRPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNV-MIQTYPGPHANAIVA 258
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
DS I D YI +GDD + +KSG D GI PT+ + I T + A + +GSE
Sbjct: 259 DSSRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHGAVV-IGSE 317
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY--G 426
+G I+DV A +I AI+TE+G+RIK+ GRGG V D+ TM + +T Y G
Sbjct: 318 TAGSIRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMG 377
Query: 427 SHADNHYDP--KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT----IGM 480
+D +P + P + I ++ ++G+ P TG+ + + +G+
Sbjct: 378 GESDTKEEPVSERTPKFRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDVAGSGKVGL 437
Query: 481 AAKH 484
A++
Sbjct: 438 TARY 441
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 178/390 (45%), Gaps = 46/390 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL-TGSFNLISHFTLYLH 177
+ G DGKT A A+ Q ++ GGA++ + G +L G +L+ L +
Sbjct: 59 LARLGAKTDGKTDARPAMIKALRQARKW---GGARIVLSGGVFLMCGPIHLVDGVCLDIR 115
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAA-AGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S + + LP+ + Y+ +I+G NL DV + G G IDG
Sbjct: 116 EGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDGNC 169
Query: 237 ALW---WQQFHK---------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
A W+ K G+ + RP L++ N+ I + ++
Sbjct: 170 AATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKII 229
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +H + S N++ +G+ A + N DGI+P+S N IED +GDD VA+KS
Sbjct: 230 NSPFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPESSRNVLIEDVSFDNGDDNVAIKS 287
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGVR 391
G D G + P++ ++IRR C + +GSEMSGG+++V ED A + G+
Sbjct: 288 GRDNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLY 345
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH--ADNHYDPKALPVIQGINYRDI 449
IKT RGGYVK+IY++ ++ ++T Y H+ ++ G++ R
Sbjct: 346 IKTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRKA 405
Query: 450 VADNVSMAARLEGISGDPFTGICIANATIG 479
A + L+G P + I IG
Sbjct: 406 RAAGIV----LQGTKAKPIRDVTIRRVEIG 431
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 180/397 (45%), Gaps = 54/397 (13%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG + K NT+A AI+ S ++ GG + +P G+WLTG + S+ L+L +
Sbjct: 52 ITDFGADPNNKKKNTEAIAAAID--SAHAIAGGT-VVIPKGEWLTGKIHFKSNVNLHLEE 108
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A LL S+D ++ + + S G + Y+ LI+ ++ +TG G + +
Sbjct: 109 GATLLFSEDPQDY--LPAVLSTWEGMECY--NYSPLIYAYECENIAITG-KGKLKAKMDT 163
Query: 239 WWQQF-----HKGKLKYT----------------------RPYLMEFMYTDNIQISSLTL 271
W F H LK RP ++F + +I + + +
Sbjct: 164 WEVWFARPSGHMQNLKRLYEMASKDIPVEERQMVNDSANFRPQFIQFNRSKHILLEGIAI 223
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
NSP W +HP SS+++++ + + A N DG++P+ N IE+C GDD +AVK
Sbjct: 224 ENSPFWVIHPYLSSDVIIREVNVFA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAVK 281
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV---RAEDIKAINTES 388
+G ++ P K +VIR + + + +A+GSE+SGG+++V E
Sbjct: 282 AGRNQDAWRLNTPVKNIVIRDCSVKNGHQ-LLAIGSELSGGVENVYMGNCEVAPNAKLNH 340
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--------PKALPV 440
+ IKT RGGYVK+IY M +K G G D Y + L
Sbjct: 341 LLFIKTNERRGGYVKNIY-----MEDIKAGRIDKGILGIETDVLYQWRDLVPTYERRLTQ 395
Query: 441 IQGINYRDIVADNVSMAARLEGISGDPFTGICIANAT 477
I+ +N +I A NV +R+ G P I + T
Sbjct: 396 IEQVNMTNIKAANVDFVSRILGEEEAPVQNISLRKVT 432
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 172/390 (44%), Gaps = 44/390 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAG-KWLTGSFNLISHFTLYL 176
+I G G+G T AFK A + + GGA++ VPAG ++ G +L+S+ L +
Sbjct: 36 NIQKMGAKGNGTTDCLPAFKKAFKKAVR---KGGARIVVPAGVYYIKGPLHLVSNVCLEI 92
Query: 177 HKDAFL-LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+ A L A + P +K Y+ I+G L DV + G GTIDG
Sbjct: 93 QEGATLKFAPEPEYYLPAVKT-----SWEGTFLQNYSPFIYGYQLHDVSIIG-KGTIDGN 146
Query: 236 GALW---WQQFHK---------------------GKLKYTRPYLMEFMYTDNIQISSLTL 271
W+ K G+ Y RP+L++ + I I + +
Sbjct: 147 AMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERITIEDVFI 206
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
NSP W +H + S N +++ I A + N DGI+P+ N IED + +GDD VA+K
Sbjct: 207 TNSPFWCIHLLQSENAILRSIRFDAKLV--NNDGIDPEMSRNVLIEDVHFNNGDDNVAIK 264
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGV 390
SG D G P++ ++IR C + LGSEMS GIQ+V E+ A + G+
Sbjct: 265 SGRDHDGRGTACPSENIIIR--NCHFKGLHAVVLGSEMSAGIQNVYVENCDYAGYCKRGL 322
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
IKT RGG++++I + ++ F++T YG D I+ I +I
Sbjct: 323 YIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYGGEGQ---DNTFFTDIENITVENIQ 379
Query: 451 ADNVSMAAR-LEGISGDPFTGICIANATIG 479
L+G P I N TIG
Sbjct: 380 CRKARAGGLVLQGTKAKPLRNIQFRNITIG 409
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 170/386 (44%), Gaps = 53/386 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G DG T AF+ AI ++VPAGK+ TG L+S+ LY
Sbjct: 29 NILDYGAKNDGSAPATGAFRAAIQAAKAAGG---GTVFVPAGKYTTGPIELVSNLVLYF- 84
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
DA + P +K R + A LI G+NL +V V G G +
Sbjct: 85 -DAGAVVEFPAQRLPFVK-----SRQQSIEALTPVPLIGGSNLENVTVAG-RGVLKSNNE 137
Query: 238 LWWQQFHKGK-----------------------------------LKYTRPYLMEFMYTD 262
W + + K RP + M +
Sbjct: 138 DWMKLMPRQKATTADPGSANGPNWEKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTMESR 197
Query: 263 NIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIV 322
N+ I L + SP W +H +YS N++V+ + II +TDGI DS N RI +CYI
Sbjct: 198 NVLIEGLQFVGSPMWTIHLLYSDNVVVRDV-IIETYPGVHTDGIAVDSSRNVRISNCYID 256
Query: 323 SGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK 382
+GDD + +K+G D G+ PT+ + I + + A + +GSE SG ++++ A +I
Sbjct: 257 TGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGA-VTIGSETSGWVRNLVASNIT 315
Query: 383 AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY---GSHADNHYDPKA-- 437
T+ GVRIK+ GRGG V+D+ TM + A +T Y G N +P +
Sbjct: 316 CDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVSNR 375
Query: 438 LPVIQGINYRDIVADNVSMAARLEGI 463
PV + I ++ ++ +A +EG+
Sbjct: 376 TPVFRNIAISNMTVNHARVAIDIEGL 401
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 178/390 (45%), Gaps = 46/390 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL-TGSFNLISHFTLYLH 177
+ G DGKT A A+ Q ++ GGA++ + G +L G +L+ L +
Sbjct: 47 LARLGAKTDGKTDARPAMIKALRQARKW---GGARIVLSGGVFLMCGPIHLVDGVCLDIR 103
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAA-AGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S + + LP+ + Y+ +I+G NL DV + G G IDG
Sbjct: 104 EGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDGNC 157
Query: 237 ALW---WQQFHK---------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
A W+ K G+ + RP L++ N+ I + ++
Sbjct: 158 AATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKII 217
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +H + S N++ +G+ A + N DGI+P+S N IED +GDD VA+KS
Sbjct: 218 NSPFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPESSRNVLIEDVSFDNGDDNVAIKS 275
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGVR 391
G D G + P++ ++IRR C + +GSEMSGG+++V ED A + G+
Sbjct: 276 GRDNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLY 333
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH--ADNHYDPKALPVIQGINYRDI 449
IKT RGGYVK+IY++ ++ ++T Y H+ ++ G++ R
Sbjct: 334 IKTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRRA 393
Query: 450 VADNVSMAARLEGISGDPFTGICIANATIG 479
A + L+G P + I IG
Sbjct: 394 RAAGIV----LQGTKAKPIRDVTIRRVEIG 419
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 159/367 (43%), Gaps = 28/367 (7%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
N A + AI L G L + G+W L S TL+L + A L + + W
Sbjct: 108 NADALQAAIADLPV-----GGTLRIGPGRWTALPVTLRSDMTLHLAEGAELCSPSSRDSW 162
Query: 192 PVIKPLPSYG------RGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQQF 243
V + G G AA + + + +++ G G +DG G WW
Sbjct: 163 SVFPARDNAGHLLGSWEGEPAAC--FAAPLHAIGARRLVLEG-KGILDGAGNAGDWWGWA 219
Query: 244 HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
+ + R + + ++ + T+ N+PSW +HP ++ ++I AP SPNT
Sbjct: 220 KETRDGARRARGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPNT 279
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDEYGIAYGMPTKQLVIRRLTCISPYSAT 362
DG NP+ + R+E GDDC+A+K+G G A + + V R +
Sbjct: 280 DGFNPEGSSEIRVEGVRFTVGDDCIAIKAGKRGPCGEAAHLRETRDVQIRHCLMERGHGG 339
Query: 363 IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMT 422
+ +GSEMSGG+ DV ED + I T+ G+R+KT GRGG V I +R + M + AF
Sbjct: 340 VVIGSEMSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTAFSAN 399
Query: 423 GNYGSHADNHYD------PKAL----PVIQGINYRDIVADNVSMA-ARLEGISGDPFTGI 471
+Y D H + P AL P I GI DI V A G+ P +
Sbjct: 400 AHYHCDPDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAPIRNV 459
Query: 472 CIANATI 478
I N +
Sbjct: 460 SIRNLRV 466
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 179/385 (46%), Gaps = 79/385 (20%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGK-WLTGSFNLISHFTLYLH 177
+ D G VGDG+T +++A + A+ + + +P + ++G NL S+ L +
Sbjct: 381 VADHGAVGDGQTDDSRALRSALAACDE--------VVIPRHRSCVSGPLNLTSNQVLRV- 431
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDA--------------AAGRYTSLIFGTNLTDV 223
D LLAS ++P+++P+ YG RD A R+ ++ N ++V
Sbjct: 432 -DGALLASTIPAQYPLMEPVVGYGWSRDTNCFPANSTRRGFREGARRHAPVVGAYNASNV 490
Query: 224 IVTGDNGTIDGQGAL---WWQQFHKGK----------------LKYTRPYLMEFMYTDNI 264
V G G IDG+ WW + + L +RP L+EF Y +
Sbjct: 491 SVVG-GGVIDGRAGEPLGWWDNCTRCRGARPPDPAFPPDEAFCLAASRPKLLEFQYVTGL 549
Query: 265 QISS------LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP---NTDGINPDSCTNTR 315
++ L L +SP W + P YS N+ V+ + I AP+ +P NTDG+
Sbjct: 550 TVAGNAVGDPLHLKDSPFWTLTPSYSRNVRVRDLRITAPIRTPGIGNTDGV--------- 600
Query: 316 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC----ISPYSATIALGSEMSG 371
E+ Y+ + DD V +KSG D +GI +PT+ +++R +TC A+GSEMSG
Sbjct: 601 -ENVYVNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNITCGDRRDDAGRGGFAVGSEMSG 659
Query: 372 GIQDVRAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHA 429
G+++V D + A G+ +KT+VGRGGY+ D+ + + + N H+
Sbjct: 660 GVRNVTFRDSVLGAGPQSRGIDVKTSVGRGGYIIDVTFENIRAPSP----FPKANVNVHS 715
Query: 430 DNHYDPKA-----LPVIQGINYRDI 449
DP +PVI + + ++
Sbjct: 716 ALRDDPDVPGDDLVPVIGNLRFANV 740
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 78/387 (20%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T A +AIN SQ GG + +P G W TG L S+ L+L A LL S D +P
Sbjct: 64 TAAINEAINTCSQ---QGGGHVIIPDGTWKTGPIRLKSNVDLHLSDKAHLLFSTDPRIFP 120
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG-ALWWQQFH------- 244
+ R + LI+ ++ +TG G +DGQ WQ+
Sbjct: 121 TV-----LTREEGIDCYNISPLIYAYGEKNIAITG-KGIMDGQSDETNWQKKERRNIQKD 174
Query: 245 -KGK-------LKYT-----------------RPYLMEFMYTDNIQISSLTLLNSPSWNV 279
KGK L+Y RP + +N+ I T SP W +
Sbjct: 175 SKGKIGERNLLLEYKVNRTPIEQRRFEGMMGMRPQFVNTYKCENVLIEGPTFNRSPFWIL 234
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
HP+ S N++V+ + + + N DG +P+SC N IE C +GDDC+A+KSG DE G
Sbjct: 235 HPLLSKNVIVRDVNLDS--HGRNNDGCDPESCENVLIERCRFNTGDDCIAIKSGKDEDGR 292
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINTESGVRIKTAVG 397
+ +P+K ++IR + A + +GSE++GG ++V E+ K + N +RIK+
Sbjct: 293 VWNIPSKNIIIRNCE-MKDGHAGVGIGSEITGGCENVWVENCKMDSPNLTRVIRIKSNPE 351
Query: 398 RGGYVKDIYVRGMTMHTMKWA-------FWMT---------------------GNYGSHA 429
RGG VK++YVR + + A +W T Y H
Sbjct: 352 RGGEVKNLYVRNVEVGVCDLAVLGIEQKYWYTPTGPYMPYFHDFYFENVKSSGSKYALHI 411
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSM 456
D H + ++ I ++ DNVSM
Sbjct: 412 DGH---EGTAQVENIYMKNCRFDNVSM 435
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 189/399 (47%), Gaps = 58/399 (14%)
Query: 125 VGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLA 184
+ G + T + AI+Q S S+GG + +PAG W++G L SH TL+L + L +
Sbjct: 38 IKSGDVTVTSVVQKAIDQCS---SNGGGIVTLPAGTWVSGPLTLKSHVTLHLAAGSTLKS 94
Query: 185 SQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL-WWQQ 242
+ + +++ P P++ R +LI +++ D+ +TG GTIDGQG WW +
Sbjct: 95 TGNPDDFVPAFISQPTHPR---------EALIIASHVQDIAITGP-GTIDGQGQKSWWSK 144
Query: 243 FHKGK--LKY-------------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHP 281
+ LK+ RP+L+EF + IS L ++NSP WN+
Sbjct: 145 ASDAREHLKHGDVSWFEKNWKGIPPANGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVL 204
Query: 282 VYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY 341
S NI V +I P SPNTDGI+ S N + + +GDD +A+KSG G A
Sbjct: 205 RNSENIDVSRSSIFNPPDSPNTDGIDVVSSKNISLRHLKLSTGDDDIAIKSGLASTGKAP 264
Query: 342 GMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
P+ + I + + +++GSE + GI V ++++ T++G+RIK+ RG
Sbjct: 265 --PSSNINIDDIDIYRGHG--LSVGSETANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQ 320
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL------------PVIQGINYRDI 449
+ I +TM+ + +T +YG + Y K+L P I + + +
Sbjct: 321 IGPISADNITMNHVNVPLVITDSYGGNGG--YSSKSLTSIPTSAISSLTPFIHDVTIQHL 378
Query: 450 VADNVSMAARLEGISGDPFTGICIA----NATIGMAAKH 484
A N MA + G+ P I + +AT G+ +++
Sbjct: 379 TATNSGMAGIISGLPEAPLQNITLKDIHIDATHGLQSRY 417
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 86/436 (19%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ S+TDFG V DG T NT+AF+ AI++L++ GG L VPAG +LTG +L + +
Sbjct: 68 NQVSLTDFGAVPDGITLNTEAFRKAISKLTKL---GGGHLIVPAGIYLTGPISLKDNIDI 124
Query: 175 YLHKDAFLLAS---QDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
+L ++A +L S +D + +P P + S I + T++ +TG+ GT
Sbjct: 125 HLERNALILFSPNKKDFLKATDNEPQP-----------KVVSGITASKRTNISITGE-GT 172
Query: 232 IDGQGALW------------WQQFH--------KGKLKY-------------------TR 252
IDG G W W Q+ KG L Y R
Sbjct: 173 IDGNGQWWRPVKRVKMSDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIAPNASEQEKMR 232
Query: 253 PYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCT 312
+L+ +N+ I +T+ NSP +++ P +N++V GIT+ P + N DGI+ +C+
Sbjct: 233 AHLIRITECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQNGDGIDVGNCS 292
Query: 313 NTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG 372
N I + GDD + +KSG E + I+ T + + +GSE+ GG
Sbjct: 293 NVLIVNSTFDVGDDAICMKSG-AEKADQTNRSCVNINIQNNTVYHGHGGFV-IGSEVIGG 350
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH-------TMKWAFWMTGNY 425
++++ + T++G+R K+AVGRGG +DI++ M+ T + +W
Sbjct: 351 MKNIYVNNNFFSGTDTGLRFKSAVGRGGKTEDIFINNCYMNNILNEAITFETTYW----- 405
Query: 426 GSHADNHY----------DPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIAN 475
DNH D + +P Q I+ ++ A G G I I N
Sbjct: 406 ----DNHVGATQPQKPAKDAEFVPNFQDIHITNVTCRGAKTAIAAHGAPG-MVHDISIEN 460
Query: 476 ATIGMAAKHKKVPWTC 491
+T K + +C
Sbjct: 461 STFYYTDKATDIDSSC 476
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 194/447 (43%), Gaps = 71/447 (15%)
Query: 82 LLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAIN 141
LL+ L++ + A + + R + +S A DFG GDG T NT A +
Sbjct: 10 LLLATGLMTGKAARAEEDREISIAAPGTLSTATVRAE--DFGARGDGVTRNTAALQ---- 63
Query: 142 QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK------ 195
+ + ++ A L + G +LTGS L S L L K L+ Q + +PV++
Sbjct: 64 RAIEAAAAQNATLVLAPGTYLTGSLFLKSGMALRLDKGVTLVGEQTIESYPVMQTRIAGI 123
Query: 196 --PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT-- 251
P PS +L+ + TDV + G+ G IDG G ++W +F + Y
Sbjct: 124 ELPWPS-------------ALLNVYDQTDVRIYGE-GKIDGNGKVFWDRFQSIRADYEAR 169
Query: 252 -----------RPYLMEFMYTDNIQISS------LTLLNSPSWNVHPVYSSNILVQGITI 294
RP L++ + I++ + L L S W V VYS ++ V GIT+
Sbjct: 170 GLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGFWTVQIVYSHDVKVSGITV 229
Query: 295 IAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
+ P+TDG++ DS +E I + DD + +K+G D G+ PT+ +VIR
Sbjct: 230 RNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVVIRN 289
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAIN-TESGVRIKTAVGRGGYVKDIYVRGMT 411
T + Y A + GSE SGGI++VR D++ I G+ K+A RGG DI + +
Sbjct: 290 STIRAAY-AGVTFGSETSGGIRNVRVHDLRVIGPVRYGILFKSAATRGGGASDIDISDID 348
Query: 412 MHTMKWAFWMTGNY-----------GSHADNHY---------DPKALPVIQGINYRDIVA 451
+ + + N+ G A Y K LP + I R + A
Sbjct: 349 VAQAETGIRINLNWFPAYSYAKIPEGLTAYPAYWATLTAPVPRSKGLPQVHNIRIRRVTA 408
Query: 452 DNVSMAARLEGISGDPFTGICIANATI 478
+ A LE + P + I I + T+
Sbjct: 409 KGLKTAVDLEAYADVPLSNIQIEDVTL 435
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 180/383 (46%), Gaps = 28/383 (7%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
SF + I C + ++ +F G +TK AI + S+ + G ++ P G + T
Sbjct: 12 SFSLSYIQCNSEIYNVIEFRVDPTGHIVSTKGITAAIREASK---NNGGVVHFPKGIYRT 68
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIK-PLPSYGRGRDAAAGRYTSLIFGTNLTD 222
G L SH TL + A LL + N +P + LPS + A YT LI +
Sbjct: 69 GPIQLRSHVTLQIDNGALLLFEDNQNLYPPVNVTLPS----GEVIALSYTPLISAFGQRN 124
Query: 223 VIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPV 282
+ +TG G +DG GA W + TRP+ + F+ + + + + + NSP +NVH
Sbjct: 125 ISITG-RGMLDGSGAFWIKLLPPPS---TRPFFLYFVESQEVLLEGVHIKNSPMYNVHFK 180
Query: 283 YSSNILVQGITIIAPVTS----PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+S+I ++GITI P + PNTDGIN D C + + I +GDD + +K+
Sbjct: 181 DTSHITIKGITITNPENTVDPGPNTDGINCDPCRYLHVSNVTISTGDDAIVMKADMRGRT 240
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
PT+ ++I + I A I++GS +GG++++ + T G+ IKTA R
Sbjct: 241 SKQLKPTEHVLIEN-SFIFVGHAGISMGSATAGGLRNITVRNCLFNGTNRGIYIKTARDR 299
Query: 399 GGYVKDIYVRGMTMHTMKWA------FWMTGNYGSHADNHYDPKAL----PVIQGINYRD 448
GG V+DI+ +TM ++ + + G H N Y P+ + P I I ++
Sbjct: 300 GGKVEDIHYHNITMLNIRKEGVAIADVYNGTDEGLHERNVY-PQPVTENTPFIGNIEFQG 358
Query: 449 IVADNVSMAARLEGISGDPFTGI 471
I ++ + + G+ P I
Sbjct: 359 IRGNSKLESIFIVGLPESPVVNI 381
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 186/402 (46%), Gaps = 62/402 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG D + + ++A AI S GG ++ +PAG+W TG +L S+ ++L +
Sbjct: 54 ITDFGAEEDDQQATSQAIVTAI---SAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLEE 110
Query: 179 DAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A LL S+D ++ P +K + G + Y+ LI+ + ++ +TG G + +
Sbjct: 111 GATLLFSEDPKDYLPAVK---TTWEGMECF--NYSPLIYAFDCENIAITG-KGELKAKMN 164
Query: 238 LWWQQF-----HKGKLKYT----------------------RPYLMEFMYTDNIQISSLT 270
W F H LK RP ++F + + + +
Sbjct: 165 TWKVWFSRPKAHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGVK 224
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ NSP W +HP S +++++ + + A N DG++P+ N IE+C GDD +AV
Sbjct: 225 ITNSPFWVIHPFMSKDVVIRDVQVFA--HGHNNDGVDPEMSQNMLIENCIFDQGDDAIAV 282
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
KSG ++ MPTK +VIR + + +A+GSE+SGG+++V E+ + + G
Sbjct: 283 KSGRNQDAWRLNMPTKNIVIRN-SLVKNGHQLLAIGSELSGGVENVYMENCE---VQEGA 338
Query: 391 R------IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--------PK 436
+ +KT RGGYV++++++ + + G G D Y +
Sbjct: 339 KLNHLLYVKTNERRGGYVRNVHMKNIQCGKID-----KGVLGIETDVLYQWRDLVPTYER 393
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
L I+ I ++ A +V+ +R++ P + + N +
Sbjct: 394 RLTPIENIYMENVRAADVAFVSRIKADPESPVEVVQLKNIQV 435
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 180/388 (46%), Gaps = 54/388 (13%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+G DG+T++ A + AI S+ GG + + +G WL+G +L +H TL L + +
Sbjct: 17 YGARHDGRTNDGPAIQRAITACSEA---GGGMVSLTSGTWLSGPLSLKNHVTLNLGQGST 73
Query: 182 LLASQD--LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA-L 238
LL S D L W + G+ A G +L+ ++ DV +TG G IDG GA +
Sbjct: 74 LLGSSDTRLFHWAFL--------GKAAQPGE--ALVSAIDVQDVAITG-QGHIDGNGAAV 122
Query: 239 WWQQF---HK----GKLKY-------------TRPYLMEFMYTDNIQISSLTLLNSPSWN 278
WW Q HK G L Y RP+L+EF + + +IS +T NSP W
Sbjct: 123 WWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWT 182
Query: 279 VHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
V SS I + +TI P +S NTDGI+ S + + I +GDD +A+KSG + G
Sbjct: 183 VVVRESSQIKIDHLTIRNPASSRNTDGIDLVSSDHVTMSTLDIATGDDNIAIKSGLRQPG 242
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
A + I + + +++GSE++ G +R D+ NT SG+RIK+ R
Sbjct: 243 RAV----SDISITQSRFGEGHG--LSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRDR 296
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD------NHYDPKA-----LPVIQGINYR 447
GG + I + M+ ++ ++ Y + DP A P I +
Sbjct: 297 GGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGTQKTVSMTDPAAPVTSTTPHIHDVTIT 356
Query: 448 DIVADNVSMAARLEGISGDPFTGICIAN 475
D+ A N A + G+ P G+ + N
Sbjct: 357 DLTAKNAETAGVVLGLPEAPIEGLTLRN 384
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 159/349 (45%), Gaps = 17/349 (4%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I DFG + ++N A + I L G L +PAG+WL+G L SH L +
Sbjct: 88 IRDFGASPEA-SNNAPAIQRTIAALPP-----GGTLRIPAGRWLSGPIFLKSHMALLVED 141
Query: 179 DAFLLASQDLNEWPVIKPLPSYGR----GRDAAAGRYTSLIFGTNLTDV-IVTGDNGTID 233
L A +P++ + GR A Y SLI + V +
Sbjct: 142 GGELAAIASRENFPILPARHADGRILGTWEGVAEACYASLINAIDCRGVHLAGAGIIDGG 201
Query: 234 GQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
G WW + + R + +++ +S LT+ NSPSW VHPV ++ +T
Sbjct: 202 GDRGDWWSWPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCKGLIAADLT 261
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I SPNTDG NP+S ++ R+ +I GDDC+A+K+G PT+ + I
Sbjct: 262 IENDPDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIENC 321
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMH 413
+ A + +GSEMS GI D+ + T+ G+RIKT GRGG V DI + M
Sbjct: 322 LMERGHGAVV-IGSEMSAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSLME 380
Query: 414 TMKWAFWMTGNYGSHAD---NHYDPKA-LPV-IQGINYRDIVADNVSMA 457
+ + Y AD N+ ++ LPV ++ + R I +NV+++
Sbjct: 381 DVATPVAVNSFYFCDADGQSNYVQSRSPLPVSVETPSIRSITVENVTVS 429
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 187/404 (46%), Gaps = 66/404 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S SITDFG NT A ++ ++ GG ++ +P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAA---IAAAIAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 175 YLHKDAFLLASQDLNEWPVIKPLP-SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
+L D L D + LP R Y+ LI+ ++ +TG NG ++
Sbjct: 122 HLADDTVLSFYTDREHY-----LPYVMTRWEGVELMGYSPLIYAYQQENIALTG-NGILE 175
Query: 234 GQGAL--WWQ---QFHKGKLKY--------TRPYLMEF----------MYTDN------- 263
G GA+ WW Q+ + Y TR L E ++ +N
Sbjct: 176 GNGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFI 235
Query: 264 -------IQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
+ I +T+ NSP W ++PV S +++V+ + I+ PN+DG NP+SC I
Sbjct: 236 QPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLI 293
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
E+C +GDDC+A+KSG + G P + +VI+ + + + +GSE+SGG +++
Sbjct: 294 ENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVV-MGSEISGGARNI 352
Query: 377 RAEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHA 429
A + + N G+RIKT RGG ++++Y+R + + ++ A F+ G+ G+
Sbjct: 353 FARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF- 411
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICI 473
+P + ++ ++ A L G P +G+ +
Sbjct: 412 --------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTL 447
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 178/406 (43%), Gaps = 58/406 (14%)
Query: 129 KTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDL 188
K T + AIN++ D G +L + G+ LTG NL+S+ T+ DA + +
Sbjct: 12 KVGPTDDIQTAINKIG----DSGGELIIAQGEHLTGPINLVSNLTVTFETDAVIKFKNNP 67
Query: 189 NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK--- 245
+ P + R L++ ++++ G G +DG G+ WW +F
Sbjct: 68 ELY-----TPVWTRWEGIECYAMHPLMYANGKENIVIRG-KGVVDGSGSSWWDKFRNIEQ 121
Query: 246 --------------GKL----------------KYTRPYLMEFMYTDNIQISSLTLLNSP 275
KL ++ RP L++F +I++S TL NSP
Sbjct: 122 EDRTLPREKYELDLAKLNPDYKTRTGGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLENSP 181
Query: 276 SWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 335
W +H VYS+ I + +T P + NTD ++ DS + +++C + GDD V +KSG
Sbjct: 182 FWTLHMVYSNKISIDNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSGSG 241
Query: 336 EYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTA 395
E GI PTK + + ++ + IA+GSE + GI DV + T G+R+K+
Sbjct: 242 EDGIRVNKPTKNVKVSDCRILASHGG-IAIGSETAAGISDVEVSNCTFDGTRRGIRLKSR 300
Query: 396 VGRGGYVKDIYVRGMTMHTMKWA------FWMTGNYGSHADNHYDPKALPV------IQG 443
RGG +++I + G+ M + W ++ G D PV I+
Sbjct: 301 RTRGGTIENINLSGLKMD-LCWCPISLEQYFAPGVLPEEEATVLDEGPQPVDETTPHIRN 359
Query: 444 INYRDIVADNV-SMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
I+ ++I A NV + AA + G+ + I N +A K +P
Sbjct: 360 ISIKNIKATNVRATAAFIVGLPEANIENVEIENFDWSLADKDNLLP 405
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 180/405 (44%), Gaps = 59/405 (14%)
Query: 121 DFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDA 180
D G GDG T NT A + A++Q + + +P G +L+G L SH TL+L A
Sbjct: 34 DTGARGDGHTLNTNALQKAVDQAAAAGG---GVVVIPPGDFLSGGLVLRSHVTLHLEAGA 90
Query: 181 FLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW 240
L S + ++ P G + G + L+F + D+ +TG +GTIDG G+ +W
Sbjct: 91 ILRGSPRVEDYEYRPGPPVEGD----SNGHH--LLFALDAEDIAITG-HGTIDGGGSAFW 143
Query: 241 QQFHKGKLKYTRPY---------------------LMEFMYTDNIQISSLTLLNSPSWNV 279
H+ RP ++E N++I +TL N+P W +
Sbjct: 144 ---HRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCRNVRIEGVTLTNAPGWTL 200
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
PV +L++GI + P+ +PNTDG++ +C N + DC I +GDD + +KS + YG
Sbjct: 201 RPVACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIATGDDAICIKS-ENPYGE 259
Query: 340 AYGMPTKQLVIRRL---TCISPYSATIALGSEMSGGIQD-------VRAEDIKAINTESG 389
+PTK + + TC + + +G+ G +++ + E +N +
Sbjct: 260 L--LPTKNITVTNCVLSTCCNGFK----VGTSTHGRVENIVFSNSVIYNESTTPLNERAT 313
Query: 390 VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDI 449
I V GG + + + + M + ++ A + ++GI + I
Sbjct: 314 SGIALEVVDGGSMSGVLISNIQMENARTPLFVRLGRRKPAQGSF-------LRGIRFEQI 366
Query: 450 VADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADI 494
A + + + G+ P + IAN++ M ++H WT A+I
Sbjct: 367 HATGALLTSSITGLPDMPVEDVVIANSSFRM-SEHGSAAWTHAEI 410
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 190/416 (45%), Gaps = 61/416 (14%)
Query: 108 NAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFN 167
NA + + S S+ D+G VGDG T NT+AF A+ L++ GG L VPAG WLTG
Sbjct: 42 NAPAIPSLSVSLKDYGAVGDGLTMNTRAFAKAMADLAKR---GGGHLNVPAGIWLTGPIV 98
Query: 168 LISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
L + L+L ++A +L S D ++ D A + + + +++ VTG
Sbjct: 99 LKDNIDLHLDRNALILFSPDKRDFLT---------ATDGKAAKVVPCLSASKRSNIAVTG 149
Query: 228 DNGTIDGQGALW------------WQQFH--------KGKLKY----------------- 250
+ G IDG G W W Q+ KG L Y
Sbjct: 150 E-GIIDGNGEYWRPVKRSKVSDTEWNQYRAMGGTVTAKGDLWYPFGLKHEPDVAEDHEAQ 208
Query: 251 --TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINP 308
R +L+ F + + +TL N+P +++ P ++++V GIT+ P + N D I+
Sbjct: 209 ERMRQHLVRFTDCRRVLVQGVTLRNAPRFHLVPQRCTDVIVDGITVACPWNAQNGDAIDI 268
Query: 309 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSE 368
+C N I + I +GDD + +K G G A G P + + I+ + + +GSE
Sbjct: 269 GNCRNVLIVNNTINAGDDGICMKGGAGAKGAADG-PCENINIQDNRVYHAHGGFV-IGSE 326
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK-----WAFWMTG 423
SGG+ ++ T++G+R K+A GRGG +DI++ + M +K + T
Sbjct: 327 FSGGMNNIYVHRNTFAGTDTGLRFKSATGRGGTTRDIHISQIYMTDIKDEAIVFECDYTD 386
Query: 424 NY-GSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
N+ G+ A + + LP I+ D+V A + G G GI I+ +T+
Sbjct: 387 NHVGAGAQKNAETDFLPEFTDIHISDVVCHGARTAIKARGRQG-MIHGIGISRSTL 441
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 204/471 (43%), Gaps = 65/471 (13%)
Query: 42 SAKAIVGNTTKQHSKITYLITTMELSRMSRLRSQVTKLVPLLIVVALLSQRGAESRKARR 101
S K +GN KQH ++ M ++PLL + G + + A +
Sbjct: 6 SKKGHLGNRRKQHVVGRLIVNCM------------VCIIPLLSCANASASTGEDWKIAEQ 53
Query: 102 LDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQL-SQYSSDGGAQLYVPAGK 160
+ N I +I + V D ++ A + I +L + S+ GG + VP G
Sbjct: 54 I----VNQIQL----PNIPNEKFVVDVSDTSLSAARAPIQRLIDEASASGGGIVVVPKGT 105
Query: 161 W-LTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGT 218
W + G L S L+L + A LL S D + + PV+K R Y+ LI+
Sbjct: 106 WQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPVVKT-----RWEGTEVFTYSPLIYAL 160
Query: 219 NLTDVIVTGDNGTIDG--QGAL--WWQ----------------------QFHKGKLKYTR 252
N+ DV +TG GTIDG Q A W++ QF +G Y R
Sbjct: 161 NVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVEKRQFGEGH--YLR 217
Query: 253 PYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCT 312
P L++F + + + T LNSP W H VY+S+ V+ + + + + N DG++ +S
Sbjct: 218 PPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDIESSQ 275
Query: 313 NTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGG 372
ED + +GDD + +KSG D G G+P+ +V R I LGSEMSGG
Sbjct: 276 FVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGG--EDGIGLGSEMSGG 333
Query: 373 IQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNH 432
I+ V E+ +S R K+ + RGG V+ I +RG + + K FW NY S+ +
Sbjct: 334 IKRVFFENNVLQEGDSAYRFKSNLDRGGRVEMIRIRGSKVASFKHLFWFQLNYPSNLHGN 393
Query: 433 YDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
+ +I D+ +NV + P + + TI A +
Sbjct: 394 FPATYTDII----IEDLTVENVGTVLEIHAPDAAPVHNVKFKDITIKKAEE 440
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
MSGG+ +V AEDI ++ S +RIKT+ GRGGYV+++Y+ MT+ + A TG YG H
Sbjct: 1 MSGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEH 60
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
D YDP ALP+I+ I +D++ +NV A ++GI G F IC++N ++ +++ KVP
Sbjct: 61 PDEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLNVSS---KVP 117
Query: 489 WTCADIGGMTSGVTPPPCELLPDQ-GPEKIRAC 520
W C+D+ G + V+P CE L ++ PE C
Sbjct: 118 WNCSDVKGYSDLVSPEVCEPLKERIFPEHWSDC 150
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 184/404 (45%), Gaps = 66/404 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S SITDFG NT A ++ ++ GG ++ +P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAA---IAAAIAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 175 YLHKDAFLLASQDLNEWPVIKPLP-SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
+L D L D + LP R Y+ LI+ ++ +TG NG ++
Sbjct: 122 HLADDTVLSFYTDREHY-----LPYVMTRWEGVELMGYSPLIYAYQQENIALTG-NGILE 175
Query: 234 GQGAL--WW---------------------------QQFHKG--------KLKYTRPYLM 256
G GA+ WW + +G + RP +
Sbjct: 176 GNGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFI 235
Query: 257 EFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
+ + I +T+ NSP W ++PV S +++V+ + I+ PN+DG NP+SC I
Sbjct: 236 QPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLI 293
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
E+C +GDDC+A+KSG + G P + +VI+ + + + +GSE+SGG +++
Sbjct: 294 ENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVV-MGSEISGGARNI 352
Query: 377 RAEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHA 429
A + + N G+RIKT RGG ++++Y+R + + ++ A F+ G+ G+
Sbjct: 353 FARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF- 411
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICI 473
+P ++ ++ ++ A L G P +G+ +
Sbjct: 412 --------MPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTL 447
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 177/390 (45%), Gaps = 46/390 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWL-TGSFNLISHFTLYLH 177
+ G DGKT A A+ Q ++ G A++ + G +L G +L+ L +
Sbjct: 47 LARLGAKTDGKTDARPAMIKALRQARKW---GRARIVLSGGVFLMCGPIHLVDGVCLDIR 103
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAA-AGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L S + + LP+ + Y+ +I+G NL DV + G G IDG
Sbjct: 104 EGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDGNC 157
Query: 237 ALW---WQQFHK---------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
A W+ K G+ + RP L++ N+ I + ++
Sbjct: 158 AATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKII 217
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +H + S N++ +G+ A + N DGI+P+S N IED +GDD VA+KS
Sbjct: 218 NSPFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPESSRNVLIEDVSFDNGDDNVAIKS 275
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGVR 391
G D G + P++ ++IRR C + +GSEMSGG+++V ED A + G+
Sbjct: 276 GRDNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLY 333
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH--ADNHYDPKALPVIQGINYRDI 449
IKT RGGYVK+IY++ ++ ++T Y H+ ++ G++ R
Sbjct: 334 IKTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRRA 393
Query: 450 VADNVSMAARLEGISGDPFTGICIANATIG 479
A + L+G P + I IG
Sbjct: 394 RAAGIV----LQGTKAKPIRDVTIRRVEIG 419
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 164/343 (47%), Gaps = 52/343 (15%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R + + + +GDGKT NT A + A++ D + ++ P G +LTG+ N+ S+
Sbjct: 94 RKIDVTTSPYNALGDGKTLNTAALQKALDD-----CDENSIVFFPKGTYLTGALNVHSNS 148
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLI--------FGTNLTDV 223
+YL + A L ++D ++ LP + R Y SL+ G N +V
Sbjct: 149 EIYLEEGALLQGTEDPADY-----LPKIHSRFEGYEMECYRSLLNLGELDHSSGFNCENV 203
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPY------------------------LMEFM 259
I+ G+ G+I G GA + + + + R Y L+
Sbjct: 204 IIRGE-GSIMGGGAALAKSIARIEGERLRDYIASLGDKIKEYEKPETIASRFRGRLINMS 262
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
NI I LTL +PSWN+H +YS I+ T+ + N DG +PDS TN+ + C
Sbjct: 263 NCQNIWIHGLTLGFAPSWNIHFIYSDQIVTDHCTLKSEGVW-NGDGWDPDSSTNSTLYAC 321
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+ DD VA+KSG + G PTK IR ++ + + +GSEMSGG++DVR
Sbjct: 322 DFYTEDDSVAIKSGKNPEGNVINRPTKH--IRVFDSVTHFGHGLCIGSEMSGGVEDVRLW 379
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVRGMT-----MHTMKW 417
D + T SG+ IK RGGYV++I VR +T MH++ +
Sbjct: 380 DCQMGPTWSGIEIKATKKRGGYVRNILVRDITASHIQMHSVGY 422
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 167/375 (44%), Gaps = 62/375 (16%)
Query: 89 LSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSS 148
L + G E + R D E R + SI G DG T N+K AI + S+
Sbjct: 243 LQETGFEGK--YRFDLPEIYEPHFRRDTLSIVALGAKADGVTLNSKIINAAITKASE--- 297
Query: 149 DGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAA 208
+GG + +PAG WLTG + S+ LYL +A L + D +++P+++ +Y A
Sbjct: 298 NGGGVVMIPAGLWLTGPIVMKSNVNLYLAPNALLQFTTDFDQYPLVET--TY---EGLKA 352
Query: 209 GRYTSLIFGTNLTDVIVTGD----------------------------NGTIDGQGALWW 240
R + I N ++ +TG +G I+G+ W
Sbjct: 353 MRCQAPISAVNAENIAITGKGIIDGGGDAWRIVKKDKLTESQWKKLLASGGIEGEDKKTW 412
Query: 241 ------QQFHKGKL-----------------KYTRPYLMEFMYTDNIQISSLTLLNSPSW 277
Q+ KL + RP ++ + + +T NSP+W
Sbjct: 413 YPSAKSQKGSHTKLAGVIESGKTAADYNDIKDFLRPNMLSITSCKYVLLEGVTFQNSPAW 472
Query: 278 NVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
+HP+ + +I ++ + P + N DGI+ +SC RIE C GDD + +KSG DE
Sbjct: 473 CLHPLLTEHITLRDVYAKNPWYAQNGDGIDLESCRYARIEGCTFDVGDDGICIKSGRDEQ 532
Query: 338 GIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
G G+ T+ +++ T + + +GSEMSGG +++ + + T+ G+R KT G
Sbjct: 533 GRKRGVATEDVIVNNCTVYHAHGGFV-VGSEMSGGARNLFVSNCSFLGTDIGLRFKTTRG 591
Query: 398 RGGYVKDIYVRGMTM 412
RGG V+ IYV + M
Sbjct: 592 RGGIVEKIYVNNINM 606
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+AF+ AI+ + + GG ++VP G +L L S+ L L KDA ++AS ++ +
Sbjct: 53 NTEAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
+ Y + + I + +V +TG+ GTIDGQGA+WW+++ + G
Sbjct: 110 RATEKT-KYAEAENG----WLPFISIADAQNVAITGE-GTIDGQGAVWWERWRENIRATG 163
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ + N+ + S+TL +SPS+++ YS ++ V G I++P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDSVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + YI DD +A+K+ + G+ + I I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISI 280
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIKT G+GG VK+I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 426 GSHADNHYDPKALPVIQ 442
KA P++Q
Sbjct: 341 ----------KAAPIVQ 347
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 153/342 (44%), Gaps = 63/342 (18%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
+ +I +G DGK NT+A +AI ++ + GG ++ +P G WLTG L+S+ L
Sbjct: 55 YEVNIVAYGAKNDGKFLNTEAINNAIKAVN---AKGGGKVIIPEGLWLTGPIVLLSNVNL 111
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
Y ++A +L + D +P+I R R S I N ++ +TG GT DG
Sbjct: 112 YTERNALILFTDDFEAYPIINTSFEGLETR-----RCQSPISARNAENIAITG-YGTFDG 165
Query: 235 QGALW------------WQQFHK----------------GKLK----------------- 249
G W W + K G LK
Sbjct: 166 AGDSWRPVKKDKLTASQWGKLVKSGGVTDSAGKIWYPTAGALKGALACKDFNVPEGINTD 225
Query: 250 --------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
+ RP L+ + + + + +T NSPSW +HP+ +I V + + P S
Sbjct: 226 EEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFNPWYSQ 285
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
N D ++ +SC N I + +GDD + +KSG D G G P + ++++ + +
Sbjct: 286 NGDALDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLHGHGG 345
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
+ +GSEMSGG++++ D + T+ G+R K+ GRGG V+
Sbjct: 346 FV-VGSEMSGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVE 386
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 183/404 (45%), Gaps = 66/404 (16%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S SITDFG NT A ++ ++ GG ++ +P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAA---IAAAIAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 175 YLHKDAFLLASQDLNEWPVIKPLP-SYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
+L D L D + LP R Y+ LI+ ++ +TG NG ++
Sbjct: 122 HLADDTVLSFYTDRKHY-----LPYVMTRWEGVELMGYSPLIYAYQQENIALTG-NGILE 175
Query: 234 GQGAL--WW---------------------------QQFHKG--------KLKYTRPYLM 256
G GA+ WW + +G + RP +
Sbjct: 176 GNGAVDAWWPWKGDWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFI 235
Query: 257 EFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
+ + I +T+ NSP W ++PV S +++V+ + I+ PN+DG NP+SC I
Sbjct: 236 QPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLI 293
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
E+C +GDDC+A+KSG + G P + +VI+ + + + +GSE+SGG +++
Sbjct: 294 ENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVV-MGSEISGGARNI 352
Query: 377 RAEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA-----FWMTGNYGSHA 429
A + + N G+RIKT RGG ++++Y+R + + ++ A F+ G+ G+
Sbjct: 353 FARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF- 411
Query: 430 DNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICI 473
+P + ++ ++ A L G P +G+ +
Sbjct: 412 --------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTL 447
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 187/403 (46%), Gaps = 62/403 (15%)
Query: 121 DFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDA 180
DFG DGKT +TKA + AI+ ++ GG ++ GK+LTGS + S L++ +
Sbjct: 57 DFGAREDGKTISTKAIQQAIDACAK---KGGGKVQFRPGKYLTGSVFIKSGVFLHVDEGV 113
Query: 181 FLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI------VTGDNGTIDG 234
LL SQ L ++P I AG +I+ L ++ ++G G I+G
Sbjct: 114 ELLGSQSLEDYPQINT---------RVAG--IEMIWPAALVNINGQQKAGISG-KGIING 161
Query: 235 QGALWWQQFHKGKLKY-------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHP 281
QG +W + K + +Y RP + +++I I +TL + W VH
Sbjct: 162 QGKPFWDAYWKLRSEYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAGFWTVHL 221
Query: 282 VYSSNILVQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
+YSS + V GI I + P+TDGI+ DS RI++ I DD +KSG D G+
Sbjct: 222 LYSSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKSGRDWDGL 281
Query: 340 AYGMPTKQLVIRRLTCISPY-SATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
PT+ ++I CIS I GSE SGG++ + A ++KA T+ G+R+K+A R
Sbjct: 282 RVNRPTEYVLI--TDCISRKGDGLITFGSETSGGMRHIIARNLKAHGTKVGIRLKSARNR 339
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYG------------------SHADNHYDP----- 435
GG V+DI + + M +++ AF +T N+ H P
Sbjct: 340 GGVVEDILLENIQMDSVRTAFEVTPNWNPSYSYSKLPAGYDINKVPEHWKKMVTPVEPAS 399
Query: 436 KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
K +P Q I +++ A ++G+ +P + N I
Sbjct: 400 KGIPTFQNIQIKNVFVKFAQRAINVDGLQENPLQKFSLENVAI 442
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 191/430 (44%), Gaps = 69/430 (16%)
Query: 78 KLVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFK 137
+LV +V ALL + R D Y+A DG+T++ A +
Sbjct: 27 RLVLGGVVAALLCMPMTSHAASSRCDPVTYSARH---------------DGRTNDGPAIQ 71
Query: 138 DAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQD--LNEWPVIK 195
AI S+ GG + + +G WL+G +L +H TL L K + LL S D L W +
Sbjct: 72 RAITACSEA---GGGVVSLASGIWLSGPLSLKNHVTLNLEKGSTLLGSSDTRLFHWAFL- 127
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA-LWWQQF---HK----GK 247
G+ A G +L+ ++ DV +TG G IDG GA +WW Q HK G
Sbjct: 128 -------GKAAQPGE--ALVSAIDVQDVAITG-QGHIDGNGAAVWWPQAVRAHKTQTSGP 177
Query: 248 LKY-------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
L Y RP+L+EF + + +IS +T NSP W V SS I + +TI
Sbjct: 178 LPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWTVVVRESSQIRIDHLTI 237
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
P +S NTDGI+ S + + + I +GDD +A+KSG + G A + I +
Sbjct: 238 RNPASSRNTDGIDLVSSDHVTMSNLEIATGDDNIAIKSGLTQPGQA----ASDISITQSR 293
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
+ +++GSE++ G +R D+ NT SG+RIK+ RGG + I +TM
Sbjct: 294 FGEGHG--LSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHLTMDH 351
Query: 415 MKWAFWMTGNY-----GSHADNHYDPKALPV------IQGINYRDIVADNVSMAARLEGI 463
++ ++ Y G+ A PV I + D+ A N + G+
Sbjct: 352 VRVPLSISDYYAGQPGGTQQTALMTEPAAPVTSTTPHIHDVTITDMTATNAGTVGVVLGL 411
Query: 464 SGDPFTGICI 473
P G+ +
Sbjct: 412 PEAPIEGLTL 421
>gi|367067221|gb|AEX12820.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067223|gb|AEX12821.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067225|gb|AEX12822.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067227|gb|AEX12823.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067229|gb|AEX12824.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067231|gb|AEX12825.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067233|gb|AEX12826.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067235|gb|AEX12827.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067237|gb|AEX12828.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067239|gb|AEX12829.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067241|gb|AEX12830.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067243|gb|AEX12831.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067245|gb|AEX12832.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067247|gb|AEX12833.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067249|gb|AEX12834.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067251|gb|AEX12835.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067253|gb|AEX12836.1| hypothetical protein 2_9627_01 [Pinus taeda]
Length = 131
Score = 135 bits (340), Expect = 6e-29, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 85/129 (65%)
Query: 415 MKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIA 474
MKWAF MTG+YGSH DN Y+P ALPV++ I+Y +IVA NVS+A +LEGI+ PF IC++
Sbjct: 3 MKWAFTMTGSYGSHPDNKYNPDALPVVERISYSNIVATNVSVAGKLEGIAKAPFKDICLS 62
Query: 475 NATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELLPDQGPEKIRACDFPTESLPIDMVEM 534
N TI MAAK KK PW C I G+++ V P PC LL ++ E C P E + +
Sbjct: 63 NVTITMAAKAKKYPWNCTYIHGLSNTVYPQPCSLLEEKPAEGDAFCPGPHELHTREENSL 122
Query: 535 KKCTYRINY 543
+ C+Y N+
Sbjct: 123 QHCSYSSNH 131
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 180/400 (45%), Gaps = 66/400 (16%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ D G GDG T +T A + A+++ S GG ++ VPAG++LTG+ + S+ L +
Sbjct: 42 NVRDLGATGDGSTKDTVAMQLALDRCSVL---GGGEVLVPAGEYLTGALRIHSNTVLRIE 98
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+ A L S D+ ++P + R Y++ I + G+N TI G+G
Sbjct: 99 EGASLNGSPDIGDYPFTQV-----RWEGRWIKGYSAFISAQD-------GENVTIIGKGK 146
Query: 238 LWWQQFHKGK--------LKYTRPY-----------------------LMEFMYTDNIQI 266
+ KG+ + YTRP LMEF + N+ +
Sbjct: 147 IVASPAIKGRVVHADGSPMVYTRPAAGTAPNPDGPTNVARRDIMRNPALMEFTHCRNVLV 206
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
+ + W+ HPVY N+ + +T+ + DGI+ DSC I+ C V+ DD
Sbjct: 207 QDVFTQGNDMWSTHPVYCENVTFRNVTVHS-----GADGIDVDSCKGVVIDGCEFVTRDD 261
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C+++KSG G G+ + + I T A I +GSE SGGI++V E K +
Sbjct: 262 CISLKSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSETSGGIRNVHVEHCKCLGA 321
Query: 387 ES-GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP----KALPVI 441
+ + IK+ GRG +++DIY+ + + + F + N + DP +P I
Sbjct: 322 RTFAIYIKSRPGRGAFIEDIYMNDLEVSGAQQGF-LRFNILNSGLQDPDPVPGDDGIPTI 380
Query: 442 QGINYRDI-------VADNVSMAAR--LEGISGDPFTGIC 472
+ ++ +I + D S+ R LEG S TG C
Sbjct: 381 RNFHFSNIRVKDVPVLVDGASIHPRKPLEGFSLTNVTGTC 420
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 185/408 (45%), Gaps = 68/408 (16%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH- 177
+TD+G V D +TKA + AI+ +S + GG + +P G++ TG+ L + L+L
Sbjct: 39 VTDYGAVPDDGILDTKAIQAAIDHVS---AQGGGMVVIPRGRFDTGAIVLKENVNLHLES 95
Query: 178 KDAFLLASQDL--NEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
+D L ++D+ +P++ +Y G A ++ LI+ ++ VTG G +DGQ
Sbjct: 96 EDTVLCFTRDIIPENYPLVL---AYYEG--APCYNWSPLIYANGQDNIAVTG-KGRLDGQ 149
Query: 236 G--ALWWQQFHK---------------------------------GKLKYTRPYLMEFMY 260
WW + G+ + RP ++ +
Sbjct: 150 ADQDTWWSWYGDTYIGQDYTRPSSSDVGILRRMVDDGVDVRKRVFGEGHFLRPNFIQVIG 209
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+N+ + +++ N P W V+PV +N+ V+GI + N DG NP++C IEDC
Sbjct: 210 CENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEVDGNFN--NNDGCNPENCNYVLIEDCR 267
Query: 321 IVSGDDCVAVKSGWDEYGIAY---GMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 377
G D VAVKSG + G G + +VIR + ++ IA GSEMSG I+D+
Sbjct: 268 FQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRG-NEFAGGTSGIAFGSEMSGDIRDIY 326
Query: 378 AEDIKAINTES---GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD 434
A+D + T+S +R K+ RGG V+ IY+RG +++ HA YD
Sbjct: 327 ADDNR-FGTQSLDYAIRFKSNAARGGVVERIYIRGSRASNIRYV-------SIHATMLYD 378
Query: 435 P----KALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
LP + I D A+ + +E P TG+ + + I
Sbjct: 379 EGWMGSYLPEYRDIRIEDFTANGGTYGIFMEAFDQVPITGLELVDVDI 426
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 175/392 (44%), Gaps = 67/392 (17%)
Query: 138 DAINQLSQYSSD-GGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP 196
DAIN+ Y S+ GG + +P G W T + S L + K+A L S+D++++P+I
Sbjct: 40 DAINRAINYISEKGGGTVVIPDGIWFTAPIEIKSDVELRIEKNAILKFSKDIDQYPLI-- 97
Query: 197 LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW------------WQQFH 244
+ +Y G++ R S I N ++ +TG G IDG G +W W+
Sbjct: 98 ITNY-EGQECI--RAKSPITAENAINIGITG-GGVIDGSGDMWRPIKQFKITDRQWEALM 153
Query: 245 KGK----------------------------------------LKYTRPYLMEFMYTDNI 264
K + RP ++ + I
Sbjct: 154 KKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENALEKASEYYDFYRPVMVSLRHCKRI 213
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
+ +T NSP+WN+HP + N+ V+ +T+ P + N DGI+ +SC I +C +G
Sbjct: 214 LLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVESCKKVHIHNCTFETG 273
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI 384
DD + +KSG + P + + I ++ +GSEMS GI++V E+ +
Sbjct: 274 DDAICLKSGKNAVARQIEGPCEDVYIHDCL-VNEGHGGFVIGSEMSRGIKNVLVENCTFL 332
Query: 385 NTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK-WAFWMTGNYGSHADNH------YDPKA 437
T+ GVRIK+A+GRGG +++I ++ + M +K A +T +Y ++ N D
Sbjct: 333 GTDVGVRIKSALGRGGVIENINIKNINMVDIKEQAIILTMSYVLNSLNRDEEINGIDKDD 392
Query: 438 LPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
+P + IN+ I A +E I P T
Sbjct: 393 IPYFKNINFEGINCLGAKEAVVIEPIKDMPET 424
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 78/116 (67%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGVGDG+T NT AF+ A+ ++ GG L+VPAG WL GSFNL SH
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
TL+L + A L A+QD WP+++PLPSYGRGR+ RY S I G L DV++TG+
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGE 161
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT++F+ AI++ + + GG + VPAG +L L S+ L+L K+A L+AS N +
Sbjct: 50 NTESFQKAIDECA---AAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGENAY 106
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
R +A G + I + +V +TG+ GTIDGQGA+WW+++ G
Sbjct: 107 RATDST----RYAEAENG-WLPFISIADAQNVAITGE-GTIDGQGAVWWERWRAAIRATG 160
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ ++ + I +TL NSPS++V Y+ ++ V G IIAP +PNTD
Sbjct: 161 KKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDA 220
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + I DD +A+K+ + G+ + + I++
Sbjct: 221 IDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---VLKQGRGISI 277
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIK+ G+GG VK++ R M ++ +G Y
Sbjct: 278 GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYY 337
Query: 426 GSHADNHYDPKALPVIQ 442
+A P++Q
Sbjct: 338 ----------QAAPIVQ 344
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 184/405 (45%), Gaps = 54/405 (13%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
++ IT FG V + NT A AI ++ GG + +P G+WLTG +L S+
Sbjct: 59 KSKKLVITGFGAVPGDQQKNTAAIARAIATANKL---GGGIVVIPKGEWLTGKIHLKSNV 115
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L K A LL S + ++ + + S G + Y+ LI+ +V +TG+ GT+
Sbjct: 116 NLHLEKGATLLFSGNPQDY--LPAVVSSWEGMECY--NYSPLIYVYECKNVAITGE-GTL 170
Query: 233 DGQGALWWQQF-----HKGKLK----------------------YTRPYLMEFMYTDNIQ 265
Q A W + F H +K + RP ++F ++NI
Sbjct: 171 KAQMATWEKWFARPRAHMESIKRLYNLAWNRAPLEQRQMVNDTAHLRPQFIQFNRSENIL 230
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+ ++++NSP W +H S NI ++ + + A N DG++P+ N IE+C GD
Sbjct: 231 LEGVSVVNSPFWTIHLYLSKNIRLRNLNVYA--HGHNNDGVDPEMSQNVLIENCVFDQGD 288
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN 385
D +A+KSG + G P+K +VIR T + + +A+GSE+SGGI++V + ++
Sbjct: 289 DAIAIKSGRNPEGWRLKTPSKNIVIRNCTVKNGHQ-LVAIGSELSGGIENVFIDHCTVLD 347
Query: 386 ---TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD-------- 434
+ IKT GGYVK+IY + + G G D Y
Sbjct: 348 GAKLNHLLFIKTNERMGGYVKNIYASNIRSGKID-----LGILGIETDVLYQWRDLVPTY 402
Query: 435 PKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIG 479
K L I+ I +I A V AR+ G P + + N T G
Sbjct: 403 EKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVETVSLKNVTAG 447
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 179/401 (44%), Gaps = 41/401 (10%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
TKA + AI+++S+ G + VPAG W TG +L S+ L++ + A L S ++ ++
Sbjct: 86 TKAIQSAIDEVSKKK---GGTVIVPAGTWRTGRISLKSNVNLHISEGAELRFSPEIEDY- 141
Query: 193 VIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDN---GTIDGQGALWW-------- 240
LP+ + R +LI+ ++ VTG G DG +
Sbjct: 142 ----LPAVFTRNEGVELMSLGALIYANGQENIAVTGKGKLVGPPDGPVRQRYMNVNVIEK 197
Query: 241 ---------QQFHKGKLK--YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
++ ++GK P + + + I +TL N+P WNV PVY N+++
Sbjct: 198 VVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYIEGITLHNTPFWNVVPVYCDNVII 257
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 349
+GIT+ + V P DGI+ +S N IE C + SGDDC +K+G E GI PT+ +V
Sbjct: 258 RGITVQS-VGIPRGDGIDIESSRNVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENVV 316
Query: 350 IRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRG 409
IR + I GSE +G I++V D +T++G+R KT R G ++I
Sbjct: 317 IRHCLAREGHGG-ITCGSETAGMIRNVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVYEN 375
Query: 410 MTMH----TMKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLE 461
+ M+ +K+ + Y + P+ + P + I R+IV D +
Sbjct: 376 IRMNLRGDAVKFDMLGSRQYVGELADRLPPRPVNDLTPAYRNITARNIVVDKARTFIDIT 435
Query: 462 GISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVT 502
GI P + I NA + K + G T VT
Sbjct: 436 GIPESPAANLLIENAIVNARTAFKASDAERVTVRGATLTVT 476
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT++F+ AI++ + + GG + VPAG +L L S+ L+L K+A L+AS N +
Sbjct: 60 NTESFQKAIDECA---AAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGENAY 116
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
R +A G + I + +V +TG+ GTIDGQGA+WW+++ G
Sbjct: 117 RATDST----RYAEAENG-WLPFISIADAQNVAITGE-GTIDGQGAVWWERWRAAIRATG 170
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ ++ + I +TL NSPS++V Y+ ++ V G IIAP +PNTD
Sbjct: 171 KKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDA 230
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + I DD +A+K+ + G+ + + I++
Sbjct: 231 IDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---VLKQGRGISI 287
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIK+ G+GG VK++ R M ++ +G Y
Sbjct: 288 GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYY 347
Query: 426 GSHADNHYDPKALPVIQ 442
+A P++Q
Sbjct: 348 ----------QAAPIVQ 354
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 48/394 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLYLH 177
+T +G D + A +AINQ + ++GG + +PAG + + G+ L S+ L++
Sbjct: 53 VTAYGAKSDTSFDSRPAILEAINQCN---TNGGGTVLIPAGNYFSKGAILLKSNVNLHIA 109
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L S +++ P++ + Y+ I+ T+V +TG GTIDG G
Sbjct: 110 DGARLEFSTVASDYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVALTG-KGTIDGNG 163
Query: 237 ALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
A+ + +H G+ Y RP +++F N+ + + +
Sbjct: 164 AVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIY 223
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP W +HPV+ N+ V+ + I + + N DG +P+S TN IE+ GDD +A+KS
Sbjct: 224 DSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKS 281
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D+ G G T+ ++IR C A I +GSEMSGG++++ ED K + +G+
Sbjct: 282 GRDQDGWRIGQATENVIIR--NCHFARWA-ITIGSEMSGGVRNIFIEDCKIDSCRNGIYF 338
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAF--WMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
K+ + RGGY +++ +R + W + T +G NH P + + I D+
Sbjct: 339 KSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNH--PT---LFRNICIEDVT 393
Query: 451 ADNV-SMAARLEGISGDPFTGICIANATIGMAAK 483
+ V S+A G+ I + N + A K
Sbjct: 394 CNRVDSVALMANGLPEAKLYNITLRNIKVKQAPK 427
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 191/398 (47%), Gaps = 49/398 (12%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAG-KWLTGSFNLISHF 172
+ ++ G GD SN+K F D L + + G + VP G +L G + +S+
Sbjct: 41 SFQVNVAKLGAKGDS-ISNSKPFFDKAMALCK--KNNGGTIVVPKGIYFLNGPIHFVSNV 97
Query: 173 TLYLHKDAFLLASQD-LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 231
L + K A + S + N P++ L S+ Y+ LI+ + T++ ++G+ GT
Sbjct: 98 NLKIEKGAKIKFSDNPENYLPMV--LTSW---EGTMIYNYSPLIYAYDCTNIAISGE-GT 151
Query: 232 IDGQGALWWQQFH--KGKLK----------------------YTRPYLMEFMYTDNIQIS 267
IDG+G W+ F +GK K + RP +++F NI +
Sbjct: 152 IDGEGGKTWKSFKDKEGKGKELSREMNHNSIPINERKFGTGYFLRPQMIQFFKCKNILVE 211
Query: 268 SLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 327
++ + NSP W +H + S +I V+GI+ + + N DGI+P+ + IE+ +GDD
Sbjct: 212 NIRIENSPFWCLHLLKSESITVRGISYKS--LNYNNDGIDPEYAKDVLIENVTFNNGDDN 269
Query: 328 VAVKSGWDEYGIA-YGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN- 385
+A+K+G D G A P++ ++IR C + +GSEMS G+Q+V E+ K +
Sbjct: 270 IAIKAGRDHEGRANSATPSENIIIR--NCNFKGLHGVVIGSEMSAGVQNVYVENCKTVGY 327
Query: 386 TESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPV-IQGI 444
+ G+ +KT RGG++K+++VR + + ++ ++T NY H + K I +
Sbjct: 328 LKRGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYITANY------HGEGKGFQSEISNV 381
Query: 445 NYRDIVADNVSMAA-RLEGISGDPFTGICIANATIGMA 481
++ DI + S ++G I + N I A
Sbjct: 382 SFSDISCNKASATGIVIQGFPDKKIKNISLNNIEIKWA 419
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 184/407 (45%), Gaps = 59/407 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ DFG V D S+ A + + ++ + GG ++ G + T + +L S+ L++ +
Sbjct: 60 VEDFGAVAD---SDEDATRAIADAIAAAHAAGGGRVVCAKGVYQTAAIHLKSNVELHVAE 116
Query: 179 DAFLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
A L D + + LP+ + R Y+ LI+ ++ VTG G +DG
Sbjct: 117 GATLSFVTDPSRY-----LPAVFTRWEGMEMMGYSPLIYAYGQQNIAVTG-GGVLDGNAN 170
Query: 237 -ALWW------------------------------------QQFHKGKLKYTRPYLMEFM 259
WW ++ H + + RP ++F
Sbjct: 171 DQTWWPWKGAHKERHWDLIEGEDQRPARDALQADVLAGVDPRERHYAEGSFLRPAFVQFY 230
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
+ ++I +TL+NSP W +HPV +++V+G+T + PN DG +P+SC N IE C
Sbjct: 231 ACNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVTCRS--HGPNNDGCDPESCKNVLIEQC 288
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+GDDC+A+KSG +E G G+ + +V+R + + LGSE+SGG +++ E
Sbjct: 289 VFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCEMRDGHGGLV-LGSEISGGARNIFME 347
Query: 380 --DIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGS-HADNHYDPK 436
+ + + E +R KT RGG ++ + VR + + + A + +Y A H
Sbjct: 348 HCSMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVVNFHYEEGEAGEH---- 403
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
+P ++ I D+ D V L G + +P I + A G AK
Sbjct: 404 -MPTVRDILVEDLRCDQVERVFHLRGFAHNPVGAITLRRAQFGRVAK 449
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 48/394 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLYLH 177
+T +G D + A +AINQ + ++GG + +PAG + + G+ L S+ L++
Sbjct: 63 VTAYGAKSDTSFDSRPAILEAINQCN---TNGGGTVLIPAGNYFSKGTILLKSNVNLHVA 119
Query: 178 KDAFLLASQDLNEW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L S +++ P++ + Y+ I+ T+V +TG GTIDG G
Sbjct: 120 DGARLEFSTVASDYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVALTG-KGTIDGNG 173
Query: 237 ALWWQQFHK------------------------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
A+ + +H G+ Y RP +++F N+ + + +
Sbjct: 174 AVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIY 233
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
+SP W +HPV+ N+ V+ + I + + N DG +P+S TN IE+ GDD +A+KS
Sbjct: 234 DSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKS 291
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
G D+ G G T+ ++IR C A I +GSEMSGG++++ ED K + +G+
Sbjct: 292 GRDQDGWRIGQATENVIIR--NCHFARWA-ITIGSEMSGGVRNIFIEDCKIDSCRNGIYF 348
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKWAF--WMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
K+ + RGGY +++ +R + W + T +G NH P + + I D+
Sbjct: 349 KSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNH--PT---LFRNICIEDVT 403
Query: 451 ADNV-SMAARLEGISGDPFTGICIANATIGMAAK 483
+ V S+A G+ I + N + A K
Sbjct: 404 CNRVDSVALMANGLPEAKLYNITLRNIKVKQAPK 437
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+AF+ AI+ + + GG ++VP G +L L S+ L L KDA ++AS ++ +
Sbjct: 53 NTEAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
+ Y + + I + +V +TG GTIDGQGA+WW+++ + G
Sbjct: 110 RATEKT-KYAEAENG----WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ + N+ + +TL +SPS++V YS ++ V G I++P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + YI DD +A+K+ + G+ + I I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISI 280
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIKT G+GG VK+I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 426 GSHADNHYDPKALPVIQ 442
KA P++Q
Sbjct: 341 ----------KAAPIVQ 347
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+AF+ AI+ + + GG ++VP G +L L S+ L L KDA ++AS ++ +
Sbjct: 53 NTEAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
+ Y + + I + +V +TG GTIDGQGA+WW+++ + G
Sbjct: 110 RATEKT-KYAEAENG----WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ + N+ + +TL +SPS++V YS ++ V G I++P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + YI DD +A+K+ + G+ + I I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISI 280
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIKT G+GG VK+I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 426 GSHADNHYDPKALPVIQ 442
KA P++Q
Sbjct: 341 ----------KAAPIVQ 347
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 174/368 (47%), Gaps = 49/368 (13%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT A + AI+ + + GG + VP G +LT L ++ L L KDA L+AS + +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVRVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEEAAY 109
Query: 192 PVIKPLPSYGRGRD-----AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
RG D A + I + +V + G+ GTIDGQGA+WW+++ +
Sbjct: 110 ----------RGDDKTRYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWREN 158
Query: 246 ----GKLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
GK T RP L+ N+ I +TL +SPS++V Y+ ++ + G I++P +
Sbjct: 159 IRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHA 218
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTD I+P N RI + YI DD +A+K+ + G+ + I T
Sbjct: 219 PNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTL--KQG 275
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
I++GSE +GG+ +VR E+ + G+RIK+ G+GG VK+I R MH ++
Sbjct: 276 RGISIGSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPLV 335
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP-----------FT 469
+ Y KA P++Q + + A ++ ++ DP F+
Sbjct: 336 FSAYY----------KAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFS 385
Query: 470 GICIANAT 477
I + N T
Sbjct: 386 NITVENLT 393
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 159/317 (50%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+AF+ AI+ + + GG ++VP G +L L S+ L L KDA ++AS ++ +
Sbjct: 53 NTEAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEIAAY 109
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
+ Y + + I + +V +TG GTIDGQGA+WW+++ + G
Sbjct: 110 RATEKT-KYAEAENG----WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ + N+ + +TL +SPS+++ YS ++ V G I++P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + YI DD +A+K+ + G+ + I I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISI 280
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIKT G+GG VK+I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 426 GSHADNHYDPKALPVIQ 442
KA P++Q
Sbjct: 341 ----------KAAPIVQ 347
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 186/406 (45%), Gaps = 74/406 (18%)
Query: 129 KTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGK-------WLTGSFNLISHFTLYLHKDA 180
K+ K + DAI + +++ S +GG ++ + + TG+ + S+ L++ ++A
Sbjct: 78 KSRKIKFYGDAIQKAINEASFNGGGKVVIKGSDDSQNPNVYYTGAIYIKSNIELHIEENA 137
Query: 181 FL-LASQDLNE-WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG-QGA 237
L NE +P++ Y R ++ I+ ++ +TG G +DG
Sbjct: 138 ILKFVRNKTNEFYPLV-----YTRWEGIEMMNFSPFIYSYEENNIAITGK-GILDGCADE 191
Query: 238 LWW------------QQFHKGKL--------------------KYTRPYLMEFMYTDNIQ 265
W QQ + +L RP ++ T+NI
Sbjct: 192 FNWMPWKFGYFNEEDQQIQRERLFNMGQEGVDVRNERIFSDDISTIRPPFIQPYKTNNIL 251
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
I +T+LNSP W V+PV NI V GI I + N DG++P+SC + IE+CY ++GD
Sbjct: 252 IRDITILNSPFWEVNPVLCENIKVSGIRIDTNLY--NNDGVDPESCKDMIIENCYFLTGD 309
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKA 383
DC+A+KSG + G G+PT ++IR + I +GSE+SGG+ ++ D +
Sbjct: 310 DCIAIKSGRNNEGRNIGIPTSNIIIRNNEFKDGHGG-ITIGSEISGGVNNIFGHDNYFDS 368
Query: 384 INTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA------FWMTGNYGSHADNHYDPKA 437
+ +R KT RGG +++IY++ T++ K A F+ G G+H
Sbjct: 369 EELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAVIHADFFYEEGTNGNHK-------- 420
Query: 438 LPVIQGINYRDI-VADNVSMAAR----LEGISGDPFTGICIANATI 478
P+++ I +I D S+ A+ L+G P I I +A +
Sbjct: 421 -PILRNIALSNIKTVDGGSIDAKNALYLKGFEDAPIENILIEDALL 465
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 44/369 (11%)
Query: 143 LSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSY 200
+ + S+ GG + VP G W + G L S L+L + A LL S D + + PV+K
Sbjct: 88 IDKASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPVVKT---- 143
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG--QGAL--WWQ--------------- 241
R Y+ LI+ N+ DV +TG GTIDG Q A W++
Sbjct: 144 -RWEGTEVFTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFD 201
Query: 242 -------QFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
QF +G Y RP L++F + + + T LNSP W H VY+S+ V+ + +
Sbjct: 202 GVPVEKRQFGEGH--YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKV 259
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
+ + N DG++ +S ED + +GDD + +KSG D G G+P+ +V R
Sbjct: 260 ESHLY--NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNND 317
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
I LGSEMSGGI+ V E+ +S R K+ + RGG V+ + +RG + +
Sbjct: 318 LGG--EDGIGLGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVAS 375
Query: 415 MKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIA 474
K FW NY S+ ++ +I D+ +NV + P +
Sbjct: 376 FKHLFWFQLNYPSNLHGNFPATYTDII----IEDLTVENVGTVLEIHAPDAAPVNNVKFK 431
Query: 475 NATIGMAAK 483
+ I A +
Sbjct: 432 DIKIKEAEE 440
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+AF+ AI+ + + GG ++VP G +L L S+ L L KDA ++AS + +
Sbjct: 53 NTQAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAY 109
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
+ Y + + I + +V +TG GTIDGQGA+WW+++ + G
Sbjct: 110 RATEKT-KYAEAENG----WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ ++N+ + +TL +SPS++V YS ++ V G I++P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSNNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + YI DD +A+K+ + G+ + I I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISI 280
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIKT G+GG VK+I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 426 GSHADNHYDPKALPVIQ 442
KA P++Q
Sbjct: 341 ----------KAAPIVQ 347
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 44/369 (11%)
Query: 143 LSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSY 200
+ + S+ GG + VP G W + G L S L+L + A LL S D + + PV+K
Sbjct: 88 IDKASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPVVKT---- 143
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG--QGAL--WWQ--------------- 241
R Y+ LI+ N+ DV +TG GTIDG Q A W++
Sbjct: 144 -RWEGTEVFTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFD 201
Query: 242 -------QFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
QF +G Y RP L++F + + + T LNSP W H VY+S+ V+ + +
Sbjct: 202 GVPVEKRQFGEGH--YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKV 259
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
+ + N DG++ +S ED + +GDD + +KSG D G G+P+ +V R
Sbjct: 260 ESHLY--NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNND 317
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHT 414
I LGSEMSGGI+ V E+ +S R K+ + RGG V+ + +RG + +
Sbjct: 318 LGG--EDGIGLGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVAS 375
Query: 415 MKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIA 474
K FW NY S+ ++ +I D+ +NV + P +
Sbjct: 376 FKHLFWFQLNYPSNLHGNFPATYTDII----IEDLTVENVGTVLEIHAPDAAPVHNVKFK 431
Query: 475 NATIGMAAK 483
+ I A +
Sbjct: 432 DIKIKEAEE 440
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 166/375 (44%), Gaps = 66/375 (17%)
Query: 150 GGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAG 209
GG ++ VPAG W +G+ +L S+ L++ DA +L S ++P++ + R
Sbjct: 94 GGGRVIVPAGTWESGAIHLKSNVNLHVQADATILFSTRPQDYPIV-----FTRWEGMELM 148
Query: 210 RYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WW--------------------QQFHKGK 247
Y+ L++ +V +TG GT+DGQ WW Q+ + +
Sbjct: 149 NYSPLVYAHGQENVALTG-AGTLDGQAGPDNWWSWKGPWNGTVEHGWKEGMADQRPARAR 207
Query: 248 L------------------KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
L Y RP ++F D + I + L SP W VHPV N++V
Sbjct: 208 LFQMAEANVSPEKRIFGEGDYLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVVV 267
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 349
+G+ I PN DG +P+S IE C +GDDC+AV SG + G P + +V
Sbjct: 268 RGVDIHG--LGPNNDGCDPESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIV 325
Query: 350 IRRLTCISPYSATIALGSEMSGGIQDVRAE--DIKAINTESGVRIKTAVGRGGYVKDIYV 407
IR + + +GS++SGG + + AE + + + +R K RGG ++ Y
Sbjct: 326 IRDCRMKEGHGGVV-VGSQISGGARHIYAERCTMDSPDLWYAIRFKNNALRGGLLEHFYF 384
Query: 408 RGMTM-HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADN--VSMAARL---E 461
R +T+ + A NY AD + P RDI+ V+ AAR+ +
Sbjct: 385 RDLTVGQVSRAAITCDFNYEEGADGPFKPV---------LRDILVQRMTVARAARVLDSQ 435
Query: 462 GISGDPFTGICIANA 476
G+ G P + I ++
Sbjct: 436 GLPGAPVGTVRIEDS 450
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 49/368 (13%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT A + AI+ + + GG + VP G +LT L ++ L L KDA L+AS ++ +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRD-----AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
RG D A + I + +V + G+ GTIDGQGA+WW+++ +
Sbjct: 110 ----------RGDDKTRYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWREN 158
Query: 246 ----GKLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
GK T RP L+ N+ I +TL +SPS++V Y+ ++ + G I++P +
Sbjct: 159 IRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHA 218
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTD I+P N RI + YI DD +A+K+ + G+ + I T
Sbjct: 219 PNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGV-VDNIYIANNTL--KQG 275
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
I++GSE +GG+ +V E+ + G+RIK+ G+GG VK+I R MH ++
Sbjct: 276 RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPLV 335
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP-----------FT 469
+ Y KA P++Q + + A ++ ++ DP F+
Sbjct: 336 FSAYY----------KAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFS 385
Query: 470 GICIANAT 477
I + N T
Sbjct: 386 NITVENLT 393
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+AF+ AI+ + + GG ++VP G +L L S+ L L KDA ++AS + +
Sbjct: 53 NTQAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAY 109
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
+ Y + + I + +V +TG GTIDGQGA+WW+++ + G
Sbjct: 110 RATEKT-KYAEAENG----WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ + N+ + +TL +SPS++V YS ++ V G I++P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + YI DD +A+K+ + G+ + I I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISI 280
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIKT G+GG VK+I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 426 GSHADNHYDPKALPVIQ 442
KA P++Q
Sbjct: 341 ----------KAAPIVQ 347
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
EDCY+ +GDD +A+KSGWDEYGI++ P+ +++RR+T +P+S IA+GSEMSGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSEMSGGIRDI 59
Query: 377 RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+I ++ G+R+KT VGRGG +++I + + + +GN G H D Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 437 ALPVIQGINYRDIVADNV 454
ALPV+ I ++V ++
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+AF+ AI+ + + GG ++VP G +L L S+ L L KDA ++AS + +
Sbjct: 53 NTQAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAY 109
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
+ Y + + I + +V +TG GTIDGQGA+WW+++ + G
Sbjct: 110 RATEKT-KYAEAENG----WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ + N+ + +TL +SPS++V YS ++ V G I++P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + YI DD +A+K+ + G+ + I I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISI 280
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIKT G+GG VK+I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 426 GSHADNHYDPKALPVIQ 442
KA P++Q
Sbjct: 341 ----------KAAPIVQ 347
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 183/387 (47%), Gaps = 58/387 (14%)
Query: 118 SITDFGGVGDGKTSNTKAF-KDAIN-QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+I DFG + +N + F +AIN + S GG + VP G++LTG L S+ L+
Sbjct: 48 NIKDFGA---KEGNNGEIFCHEAINLAILTCSQAGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
L + A+L S + ++ + + G D LI+ +++ +TG G IDGQ
Sbjct: 105 LEEGAYLKFSSE--KYLYTPTVLTRWEGVDCY--NLHPLIYAYGESNIAITGK-GIIDGQ 159
Query: 236 GAL--WWQ---------------QFHKGKLKYT--------------------RPYLMEF 258
+ WW Q + G+ K RP L+
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINL 219
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+ I I ++TL NSP W +HP++ ++ V+G+ + + PN+DG +P+S N IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIEN 277
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG + G + +P++ +++R + + +GSE+SGG +++
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG-VVVGSEISGGYKNLFV 336
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+ K + N E +RIKT RGG +++IYVR + + + A + N D
Sbjct: 337 ENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV-LKINLQYENREKCDRS 395
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGI 463
PV+ R + DNV+ G+
Sbjct: 396 FPPVV-----RHVYLDNVTSEKSKYGV 417
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 165/365 (45%), Gaps = 44/365 (12%)
Query: 147 SSDGGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGR 204
S+ GG + VP G W + G L S L+L + A LL S D + + PV+K R
Sbjct: 92 SASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPVVKT-----RWE 146
Query: 205 DAAAGRYTSLIFGTNLTDVIVTGDNGTIDG--QGAL--WWQ------------------- 241
Y+ LI+ N+ DV +TG GTIDG Q A W++
Sbjct: 147 GTEVFTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPV 205
Query: 242 ---QFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
QF +G Y RP L++F + + + T LNSP W H VY+S+ V+ + + + +
Sbjct: 206 EKRQFGEGH--YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHL 263
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
N DG++ +S ED + +GDD + +KSG D G G+P+ +V R
Sbjct: 264 Y--NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGG- 320
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
I LGSEMSGGI+ V E+ +S R K+ + RGG V+ + +RG + + K
Sbjct: 321 -EDGIGLGSEMSGGIKRVFFENNILHEGDSAYRFKSNLDRGGRVEMVRIRGSEVASFKHL 379
Query: 419 FWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI 478
FW NY S+ ++ +I D+ +NV + P + + I
Sbjct: 380 FWFQLNYPSNLHGNFPATYTDII----IEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKI 435
Query: 479 GMAAK 483
A +
Sbjct: 436 KEAEE 440
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 183/387 (47%), Gaps = 58/387 (14%)
Query: 118 SITDFGGVGDGKTSNTKAF-KDAIN-QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+I DFG + +N + F +AIN + S GG + VP G++LTG L S+ L+
Sbjct: 48 NIKDFGA---KEGNNGEIFCHEAINLAILTCSQAGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
L + A+L S + ++ + + G D LI+ +++ +TG G IDGQ
Sbjct: 105 LEEGAYLKFSSE--KYLYTPTVLTRWEGVDCY--NLHPLIYAYGESNIAITGK-GIIDGQ 159
Query: 236 GAL--WWQ---------------QFHKGKLKYT--------------------RPYLMEF 258
+ WW Q + G+ K RP L+
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAKTFAPIDKRQMTFEDGLRPQLINL 219
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+ I I ++TL NSP W +HP++ ++ V+G+ + + PN+DG +P+S N IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIEN 277
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG + G + +P++ +++R + + +GSE+SGG +++
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG-VVVGSEISGGYKNLFV 336
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+ K + N E +RIKT RGG +++IYVR + + + A + N D
Sbjct: 337 ENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV-LKINLQYENREKCDRS 395
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGI 463
PV+ R + DNV+ G+
Sbjct: 396 FPPVV-----RHVYLDNVTSEKSKYGV 417
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 183/387 (47%), Gaps = 58/387 (14%)
Query: 118 SITDFGGVGDGKTSNTKAF-KDAIN-QLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLY 175
+I DFG + +N + F +AIN + S GG + VP G++LTG L S+ L+
Sbjct: 48 NIKDFGA---KEGNNGEIFCHEAINLAILTCSQAGGGTVLVPPGEFLTGPITLKSNVNLH 104
Query: 176 LHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ 235
L + A+L S + ++ + + G D LI+ +++ +TG G IDGQ
Sbjct: 105 LEEGAYLKFSSE--KYLYTPTVLTRWEGVDCY--NLHPLIYAYGESNIAITGK-GIIDGQ 159
Query: 236 GAL--WWQ---------------QFHKGKLKYT--------------------RPYLMEF 258
+ WW Q + G+ K RP L+
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINL 219
Query: 259 MYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIED 318
+ I I ++TL NSP W +HP++ ++ V+G+ + + PN+DG +P+S N IE+
Sbjct: 220 YRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIEN 277
Query: 319 CYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRA 378
C +GDDC+A+KSG + G + +P++ +++R + + +GSE+SGG +++
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG-VVVGSEISGGYKNLFV 336
Query: 379 EDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+ K + N E +RIKT RGG +++IYVR + + + A + N D
Sbjct: 337 ENCKMDSPNLERIIRIKTNNCRGGVIENIYVRNIEVGECREAV-LKINLQYENREKCDRS 395
Query: 437 ALPVIQGINYRDIVADNVSMAARLEGI 463
PV+ R + DNV+ G+
Sbjct: 396 FPPVV-----RHVYLDNVTSEKSKYGV 417
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 49/368 (13%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT A + AI+ + + GG + VP G +LT L ++ L L KDA L+AS ++ +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRD-----AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
RG D A + I + +V + G+ GTIDGQGA+WW+++ +
Sbjct: 110 ----------RGDDKTRYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWREN 158
Query: 246 ----GKLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
GK T RP L+ N+ I +TL +SPS++V Y+ ++ + G I++P +
Sbjct: 159 IRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHA 218
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTD I+P N RI + YI DD +A+K+ + G+ + I T
Sbjct: 219 PNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTL--KQG 275
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
I++GSE +GG+ +V E+ + G+RIK+ G+GG VK+I R MH ++
Sbjct: 276 RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPLV 335
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP-----------FT 469
+ Y KA P++Q + + A ++ ++ DP F+
Sbjct: 336 FSAYY----------KAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFS 385
Query: 470 GICIANAT 477
I + N T
Sbjct: 386 NITVENLT 393
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 49/368 (13%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT A + AI+ + + GG + VP G +LT L ++ L L KDA L+AS ++ +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRD-----AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
RG D A + I + +V + G+ GTIDGQGA+WW+++ +
Sbjct: 110 ----------RGDDKTRYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWREN 158
Query: 246 ----GKLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
GK T RP L+ N+ I +TL +SPS++V Y+ ++ + G I++P +
Sbjct: 159 IRATGKKGGTDRPRLIYITRASNVLIYGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHA 218
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTD I+P N RI + YI DD +A+K+ + G+ + I T
Sbjct: 219 PNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGV-VDNIYIANNTL--KQG 275
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
I++GSE +GG+ +V E+ + G+RIK+ G+GG VK+I R MH ++
Sbjct: 276 RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPLV 335
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP-----------FT 469
+ Y KA P++Q + + A ++ ++ DP F+
Sbjct: 336 FSAYY----------KAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFS 385
Query: 470 GICIANAT 477
I + N T
Sbjct: 386 NITVENLT 393
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
EDCY+ +GDD +A+KSGWDEYGI++ P+ +++RR+T +P+S IA+GSE SGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSETSGGIRDI 59
Query: 377 RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+I ++ G+R+KT VGRGG +++I + + + +GN G H D Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 437 ALPVIQGINYRDIVADNV 454
ALPV+ I D+V ++
Sbjct: 120 ALPVVGDIAVLDVVGSSI 137
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 28/317 (8%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT +F+ AI++ + + GG + VPAG +L L S+ L+L K A L+AS + +
Sbjct: 60 NTSSFQKAIDECA---AAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKHATLVASTGESAY 116
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK-----G 246
Y + + + I + +V +TG+ GTIDGQGA+WW+++ + G
Sbjct: 117 RATDST-RYAQAENG----WLPFISIADAQNVAITGE-GTIDGQGAVWWERWREAIRATG 170
Query: 247 KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
K T RP L+ + + + +TL NSPS++V Y+ ++ V G +IIAP +PNTD
Sbjct: 171 KKGGTDRPRLIYITRSSQVLVDGVTLTNSPSFHVVMRYARDVTVNGTSIIAPWHAPNTDA 230
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
I+P N RI + I DD +A+K+ + G+ + + I++
Sbjct: 231 IDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPDGVVDNVYIANN---VLKQGRGISI 287
Query: 366 GSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
GSE SGG+ +V E+ + + G+RIK+ G+GG VK++ R M ++ +G Y
Sbjct: 288 GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEVPLVFSGYY 347
Query: 426 GSHADNHYDPKALPVIQ 442
+A P++Q
Sbjct: 348 ----------QAAPIVQ 354
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 195/433 (45%), Gaps = 62/433 (14%)
Query: 76 VTKLVPLLIVVALL----SQRGAESRKARRLDSFEYNAISCRAHSASITDFGGV--GDGK 129
V KLV +L + A +Q E K + S +I DFG +G+
Sbjct: 2 VKKLVSVLCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGE 61
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
+A AI SQ GG + VP G++LTG L S+ L+L + A+L S +
Sbjct: 62 ILCHEAINLAILTCSQ---TGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSE-- 116
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQ------ 241
++ + + G D LI+ +++ +TG G IDGQ + WW
Sbjct: 117 KYLYTPTVLTRWEGVDCY--NLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPH 173
Query: 242 ---------QFHKGKLKYT--------------------RPYLMEFMYTDNIQISSLTLL 272
Q + G+ K RP L+ + I I ++TL
Sbjct: 174 YGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLK 233
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +HP++ ++ V+G+ + + PN+DG +P+S N IE+C +GDDC+A+KS
Sbjct: 234 NSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKS 291
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINTESGV 390
G + G + +P++ +++R + + +GSE+SGG +++ E+ K + N E +
Sbjct: 292 GRNADGRKWNVPSENIIVRNCEMKDGHGG-VVVGSEISGGYKNLFVENCKMDSPNLERVI 350
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
RIKT RGG +++IYVR + + + A + N D PV+ R I
Sbjct: 351 RIKTNNCRGGVIENIYVRNVEVGECREAV-LKINLQYENREKCDRNFPPVV-----RHIY 404
Query: 451 ADNVSMAARLEGI 463
DNV+ G+
Sbjct: 405 LDNVTSEKSKYGV 417
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 165/349 (47%), Gaps = 62/349 (17%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +G DG T NTK+ AI+ S+ +GG +++ G WLTG L S+ L++ +
Sbjct: 62 VEKYGAKPDGITLNTKSINAAIDACSK---NGGGVVFLGGGVWLTGPIQLKSNVNLHVKR 118
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
DA LL ++D +++ +++ G A S I N+ +V +TG+ G IDG G +
Sbjct: 119 DAILLFTKDKSQYKLVE-----GNWEGKPALVNESPISAFNVENVAITGE-GIIDGSGEV 172
Query: 239 W-----------------------------W---QQFHKG-------------KL----- 248
W W + + KG KL
Sbjct: 173 WRLVKKGKLTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYFKAGSKLADYEP 232
Query: 249 --KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGI 306
+ RP L + I + +T NSP+W +HP+ S +++++ + + P + N DGI
Sbjct: 233 MKDFYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGI 292
Query: 307 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALG 366
+ +SC N IE+ GDD + +KSG DE G MPT+ +++R + + +G
Sbjct: 293 DIESCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHAHGGFV-IG 351
Query: 367 SEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
SEMSGG +++ + I T+ G+R KT GRGG V+++Y+ M +
Sbjct: 352 SEMSGGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDI 400
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 172/392 (43%), Gaps = 44/392 (11%)
Query: 140 INQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLP 198
+NQ + + S GG + +P GKW +G L S+ L+L + + + + ++ LP
Sbjct: 69 VNQTIEEISQKGGGTVIIPKGKWKSGRIVLKSNVNLHLAEGSEIEFPGNAEDY-----LP 123
Query: 199 S-----------------YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG-TIDGQGALWW 240
+ Y G D A +I+G +L I NG T+ + L
Sbjct: 124 AVFTRHEGIEIMGSGSFIYANGEDNIAITGKGVIYGPSLDAEIRQRPNGNTVVEKDILNN 183
Query: 241 QQFHKGKLK------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
K + +P + + N+ I +T+ S WNV P+Y N++++GIT+
Sbjct: 184 APVEKRVFDGMDGRGFYKPKTISPINCTNVLIEGITMERSTFWNVCPIYCENVIIRGITV 243
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
+ + P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ +VI R +
Sbjct: 244 NS-IGIPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYS 301
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM-- 412
+ GSE +GG+++V D T+ G+R KT R G V D + M
Sbjct: 302 LAQQGHGGVTCGSETAGGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMIN 361
Query: 413 --HTMKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGD 466
KW + Y Y P+A+ P I+ I+ ++ + ++ + GI
Sbjct: 362 VGEAFKWDLLGSKRYVGELAERYPPRAVNKLTPTIKDIHIKNFIVESAEKILSVNGIPEI 421
Query: 467 PFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
P + + I N I KK+ D+ G T
Sbjct: 422 PCSNVLIENGKI----ISKKLIGALNDVDGFT 449
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 34/334 (10%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
D + +T + AINQ ++ S +++P G +L G+ L L + A L
Sbjct: 17 DIQQDDTVMLQKAINQGAKEHS----PVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKT 72
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ----- 241
++ +P I + + AA ++ + D+++ G G IDGQG WW+
Sbjct: 73 EIEAFPEIDTRVAGVEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGE 126
Query: 242 --------QFHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
++ + L++ RP + +++ I L S WN+ YS+++
Sbjct: 127 DQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDV 186
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
LV+ I II P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + +
Sbjct: 187 LVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSR 245
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I R S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V
Sbjct: 246 IEIARCNIRSGYGVTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRV 303
Query: 408 RGMTMHTMKWAF-WMTGNYGSH-ADNHYDPKALP 439
+ M +++ F W+ + + N D + +P
Sbjct: 304 ENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMP 337
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 34/334 (10%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
D + +T + AINQ ++ S +++P G +L G+ L L + A L
Sbjct: 17 DIQQDDTVMLQKAINQGAKEHS----PVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKT 72
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ----- 241
++ +P I + + AA ++ + D+++ G G IDGQG WW+
Sbjct: 73 EIEAFPEIDTRVAGVEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGK 126
Query: 242 --------QFHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
++ + L++ RP + +++ I L S WN+ YS+++
Sbjct: 127 DQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDV 186
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
LV+ I II P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + +
Sbjct: 187 LVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSR 245
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I R S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V
Sbjct: 246 IEIARCNIRSGYGVTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRKRGGVIENIRV 303
Query: 408 RGMTMHTMKWAF-WMTGNYGSH-ADNHYDPKALP 439
+ M +++ F W+ + + N D + +P
Sbjct: 304 ENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMP 337
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 195/433 (45%), Gaps = 62/433 (14%)
Query: 76 VTKLVPLLIVVALL----SQRGAESRKARRLDSFEYNAISCRAHSASITDFGGV--GDGK 129
V KLV +L + A +Q E K + S +I DFG +G+
Sbjct: 2 VKKLVSVLCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGE 61
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
+A AI SQ GG + VP G++LTG L S+ L+L + A+L S +
Sbjct: 62 ILCHEAINLAILTCSQ---TGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSE-- 116
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQ------ 241
++ + + G D LI+ +++ +TG G IDGQ + WW
Sbjct: 117 KYLYTPTVLTRWEGVDCY--NLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPH 173
Query: 242 ---------QFHKGKLKYT--------------------RPYLMEFMYTDNIQISSLTLL 272
Q + G+ K RP L+ + I I ++TL
Sbjct: 174 YGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLK 233
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +HP++ ++ V+G+ + + PN+DG +P+S N IE+C +GDDC+A+KS
Sbjct: 234 NSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKS 291
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINTESGV 390
G + G + +P++ +++R + + +GSE+SGG +++ E+ K + N E +
Sbjct: 292 GRNADGRKWNVPSENIIVRNCEMKDGHGG-VVVGSEISGGYKNLFVENCKMDSPNLERVI 350
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
RIKT RGG +++IYVR + + + A + N D PV+ R +
Sbjct: 351 RIKTNNCRGGVIENIYVRNVEVGECREAV-LKINLQYENREKCDRNFPPVV-----RHVY 404
Query: 451 ADNVSMAARLEGI 463
DNV+ G+
Sbjct: 405 LDNVTSEKSKYGV 417
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 178/404 (44%), Gaps = 57/404 (14%)
Query: 121 DFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDA 180
DF G N + K ++ GG ++ VP G W TG +L S+ L+L K+A
Sbjct: 60 DFVITAFGAKQNQRCDKAITEAIAACHKAGGGRVVVPEGVWSTGPVHLKSNVNLHLQKNA 119
Query: 181 FLLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQ--GA 237
L D + LP + R ++ LI+ ++ VTG+ G ++G G
Sbjct: 120 VLSFVTDPQAY-----LPEVFTRWEGVELMGFSPLIYAYQQQNIAVTGE-GILEGNASGE 173
Query: 238 LWWQQFHKGKLKYT-------------------------------------RPYLMEFMY 260
WW KG K+T RP ++
Sbjct: 174 NWWP--WKGVWKHTPWKLDPATDQKPGRDQLFAMAEAGVPVEKRYLDNNRLRPPFIQPYG 231
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
+ + I +T+ NSP W ++PV +++++G+ ++ PN+DG +P+SC IE+C
Sbjct: 232 CERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDPESCQRVLIENCL 289
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG + G P +Q+VI+ S + + +GSE+SGG + + A
Sbjct: 290 FDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGHGGVV-IGSEISGGAKQIFARR 348
Query: 381 IK--AINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ + N E G+RIKT RGG ++ I V + + +K A + Y ++ L
Sbjct: 349 CRMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEEGDAGNF----L 404
Query: 439 PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAA 482
P ++ + + A + G+ +GI +++ + A+
Sbjct: 405 PEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSFEQAS 448
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 34/334 (10%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
D + +T + AINQ ++ S +++P G +L G+ L L + A L
Sbjct: 17 DIQQDDTVMLQKAINQGAKEHS----PVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKT 72
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ----- 241
++ +P I + + AA ++ + D+++ G G IDGQG WW+
Sbjct: 73 EIEAFPEIDTRVAGVEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGK 126
Query: 242 --------QFHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
++ + L++ RP + +++ I L S WN+ YS+++
Sbjct: 127 DQKSGTRAEYDRKVLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDV 186
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
LV+ I II P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + +
Sbjct: 187 LVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSR 245
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I R S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V
Sbjct: 246 IEIARCNIRSGYGVTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRV 303
Query: 408 RGMTMHTMKWAF-WMTGNYGSH-ADNHYDPKALP 439
+ M +++ F W+ + + N D + +P
Sbjct: 304 ENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMP 337
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 34/334 (10%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
D + +T + AINQ ++ S +++P G +L G+ L L + A L
Sbjct: 17 DIQQDDTVMLQKAINQGAKEHS----PVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKT 72
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ----- 241
++ +P I + + AA ++ + D+++ G G IDGQG WW+
Sbjct: 73 EIEAFPEIDTRVAGVEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGK 126
Query: 242 --------QFHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
++ + L++ RP + +++ I L S WN+ YS+++
Sbjct: 127 DQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDV 186
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
LV+ I II P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + +
Sbjct: 187 LVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSR 245
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I R S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V
Sbjct: 246 IEIARCNIRSGYGVTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRV 303
Query: 408 RGMTMHTMKWAF-WMTGNYGSH-ADNHYDPKALP 439
+ M +++ F W+ + + N D + +P
Sbjct: 304 ENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMP 337
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 195/433 (45%), Gaps = 62/433 (14%)
Query: 76 VTKLVPLLIVVALL----SQRGAESRKARRLDSFEYNAISCRAHSASITDFGGV--GDGK 129
V KLV +L + A +Q E K + S +I DFG +G+
Sbjct: 2 VKKLVSVLCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGE 61
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
+A AI SQ GG + VP G++LTG L S+ L+L + A+L S +
Sbjct: 62 ILCHEAINLAILTCSQ---TGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSE-- 116
Query: 190 EWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--WWQ------ 241
++ + + G D LI+ +++ +TG G IDGQ + WW
Sbjct: 117 KYLYTPTVLTRWEGVDCY--NLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPH 173
Query: 242 ---------QFHKGKLKYT--------------------RPYLMEFMYTDNIQISSLTLL 272
Q + G+ K RP L+ + I I ++TL
Sbjct: 174 YGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLK 233
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +HP++ ++ V+G+ + + PN+DG +P+S N IE+C +GDDC+A+KS
Sbjct: 234 NSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKS 291
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK--AINTESGV 390
G + G + +P++ +++R + + +GSE+SGG +++ E+ K + N E +
Sbjct: 292 GRNADGRKWNVPSENIIVRNCEMKDGHGG-VVVGSEISGGYKNLFVENCKMDSPNLERVI 350
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIV 450
RIKT RGG +++IYVR + + + A + N D PV+ R +
Sbjct: 351 RIKTNNCRGGVIENIYVRNVEVGECREAV-LKINLQYENREKCDRSFPPVV-----RHVY 404
Query: 451 ADNVSMAARLEGI 463
DNV+ G+
Sbjct: 405 LDNVTSEKSKYGV 417
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 130 bits (328), Expect = 1e-27, Method: Composition-based stats.
Identities = 61/115 (53%), Positives = 76/115 (66%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
R SI DFGGVGDG+T NT AF+ A+ ++ GG L+VPAG WL GSFNL SH
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
TL+L + A L A+QD WP+++PLPSYGRGR+ RY S I G L DV++T
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITA 160
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 159/334 (47%), Gaps = 47/334 (14%)
Query: 150 GGAQLYVPAGKW-LTGSFNLISHFTLYLHKDAFLLASQDLNEW-PVIKPLPSYGRGRDAA 207
GG + + G + L G +L S L L + A+L S +++ PV+ R
Sbjct: 74 GGGTVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQFSGKSSDFLPVV-----LTRWEGTE 128
Query: 208 AGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK---------------------- 245
++ +I+ + ++ +TG GTID QG L + + K
Sbjct: 129 LYGHSPMIYAYHANNIAITG-KGTIDAQGGLEFAAWSKIEANDRDRLREMGDKLVPVHER 187
Query: 246 --GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
G+ RP ++ + I +T+ +SP W +HPVY N++V+G+TI + PN
Sbjct: 188 IFGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTIDSHF--PNN 245
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DG +P+S TN IE+C +GDD +A+KSG D G G P++ +VIR S + +
Sbjct: 246 DGCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHSECNG-L 304
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF--WM 421
+GSEMSGG DV +I+ ++ + K+ RGGY++++ V +T+ K A +
Sbjct: 305 CIGSEMSGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDSITVERAKGAILRFE 364
Query: 422 TGNYGSHADNHYDPKALPVIQGINYRDIVADNVS 455
T +G NH +AL Y D NVS
Sbjct: 365 TNYFGFRGGNH---QAL-------YEDFQISNVS 388
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 160/322 (49%), Gaps = 38/322 (11%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT+A + AI+ + + GG + VP G +LT L S+ L L KDA L+AS ++ +
Sbjct: 53 NTEAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKSNIQLKLEKDATLVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRD-----AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
R D A + I + +V + G+ GTIDGQGA+WW+++ +
Sbjct: 110 ----------RADDKSKYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWREN 158
Query: 246 ----GKLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
GK T RP L+ + N+ I +TL +SPS++V Y+ ++ + G I++P +
Sbjct: 159 IRATGKKGGTDRPRLIYITRSHNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHA 218
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTD I+P N RI + YI DD +A+K+ + G+ + I T
Sbjct: 219 PNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTL--KQG 275
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
I++GSE +GG+ +V E+ + G+RIK+ G+GG VK+I R MH ++
Sbjct: 276 RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTKMHNVEVPLV 335
Query: 421 MTGNYGSHADNHYDPKALPVIQ 442
+ Y KA P+++
Sbjct: 336 FSAYY----------KAAPIVE 347
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 185/384 (48%), Gaps = 30/384 (7%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
AIS +H + FG G+ +T A + AIN+ + S+ G ++ P G++L+G+ L
Sbjct: 14 AISA-SHIYDVNKFGADSTGRKPSTHAIQKAINKAA---SNNGGTVHFPHGQYLSGAIEL 69
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVI-KPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTG 227
S+ L D L D E+P + K LP+ G+ ++T LI + ++ + G
Sbjct: 70 KSNIILDFADDVVLKFLDDPKEYPPLHKKLPN---GKIVNL-QFTPLIRAFDHINITIRG 125
Query: 228 DNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
N +DG G WW++ TRP ++ + + + ++T+ +SP +NV+ ++
Sbjct: 126 -NAVLDGHGETWWKRMPPPS---TRPVFLQIFWVRYLTLENITVKSSPMFNVNLKNCDDV 181
Query: 288 LVQGITIIAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
++GI I P PNTDGIN +SC I I +GDDC+A+ +
Sbjct: 182 TIRGIKIRNPANYVDPGPNTDGINVNSCRRVHITGVNISTGDDCIALDANGKG---KTKT 238
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
PT+ ++I + + +++GS SGG+++V + T G+ IK+ GRGG V+
Sbjct: 239 PTEDVLIEDSHMYAGHGG-VSIGSVTSGGLRNVTVRNCIFNGTNRGLFIKSRRGRGGLVE 297
Query: 404 DIYVRGMTMHTMK------WAFWMTGNYGSHA-DNHYDP--KALPVIQGINYRDIVADNV 454
DI+ + M ++ A + + G + D +++P + P I+ + +++I D+V
Sbjct: 298 DIHYHNIQMVDLRKEGIAIAAIYNGSDPGLRSRDFYWEPVNETTPFIRNVEFKNIHGDSV 357
Query: 455 SMAARLEGISGDPFTGICIANATI 478
+ G+ P + N I
Sbjct: 358 LNPIFIVGLPESPIENVTFTNVKI 381
>gi|325970193|ref|YP_004246384.1| glycoside hydrolase family protein [Sphaerochaeta globus str.
Buddy]
gi|324025431|gb|ADY12190.1| glycoside hydrolase family 28 [Sphaerochaeta globus str. Buddy]
Length = 437
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 149/317 (47%), Gaps = 29/317 (9%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
I FG +GDG+T NT A + AI++ + A + V G +L+G+ L L + K
Sbjct: 26 IRAFGAIGDGRTLNTLAIQAAIDEAATQQ----AVVVVADGIYLSGALFLKQGMALEIRK 81
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
A LL S +L ++P I+ GR G + G +L+DV V G+ GT+DG G
Sbjct: 82 GATLLGSPNLADYP-IQQTRFEGRLCTWPVG----FLNGMHLSDVKVYGE-GTLDGNGFP 135
Query: 239 WWQQFHKGK------------LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
+W+QF + RP L F D I + LTL NS WN+H S N
Sbjct: 136 FWEQFWDARQAAIASNAAFSNRDIMRPRLCYFEDCDRIHLEGLTLQNSAFWNLHLYLSHN 195
Query: 287 ILVQGITIIAP---VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
I ++ +TI AP V + ++D I+ D+C+N I DC + DDCV +K G +
Sbjct: 196 ITIKALTIQAPHEGVRAASSDAIDIDACSNVTISDCTFSTDDDCVCIKGGKGPQAHRINL 255
Query: 344 PTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
PT+ +V+ R C + I LGSE + + +V + S VR K
Sbjct: 256 PTENIVVER--CRFGFGHGVITLGSE-AALVSNVVVRNCVVEGENSLVRCKFRSDTYQRF 312
Query: 403 KDIYVRGMTMHTMKWAF 419
++I G+TM W F
Sbjct: 313 ENILFEGITMQGGGWLF 329
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
EDCY+ +GDD +A+KSGWDEYGI++ P+ +++RR+T +P+S IA+GSE SGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSETSGGIRDI 59
Query: 377 RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+I ++ G+R+KT VGRGG +++I + + + +GN G H D Y+P
Sbjct: 60 LVENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 437 ALPVIQGINYRDIVADNV 454
ALPV+ I ++V ++
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
WDEYGI+Y P+ ++IR L S SA I++GSEMSGG+ +V E++ ++ VRIK
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADN 453
TA GRGGYV+DI R +T ++ + +Y H D YD KA P++Q I++ +
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 454 VSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSG-VTPPPCELL 509
V + R+ G P + + ++G+ K K + + CA + G G + P PCE L
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHI-FQCAFVQGRVIGSIFPAPCENL 176
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 179/379 (47%), Gaps = 44/379 (11%)
Query: 130 TSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLN 189
++ TK + AI+ +S+ GG + +PAG W +G L S+ L+L ++A L ++
Sbjct: 68 SAQTKEIQQAIDAVSK---KGGGTVIIPAGNWHSGRIALKSNVNLHLEENAVLEFGGEIR 124
Query: 190 EW-PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA-------LWWQ 241
++ PV+ + R + I+ ++ VTG G + G A + Q
Sbjct: 125 DYLPVV-----FTRTEGVEVMSLGACIYANGQHNIAVTG-KGKLVGPPANCPVRKQVMRQ 178
Query: 242 QFHKGKLKYTRP--------------YLMEFMYT---DNIQISSLTLLNSPSWNVHPVYS 284
+ + +P YL F+ N+ + L L N+P WN+ P+Y
Sbjct: 179 DVIENVVAANKPVSQRIYDGHDGGPVYLPMFVSAVNCKNVYLEGLQLENTPFWNIVPIYC 238
Query: 285 SNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
N++++GIT+ + V P+ DGI+ +S N IE C + GDDC +K+G E G+ G P
Sbjct: 239 DNVIIRGITVNS-VGIPSGDGIDIESSKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGKP 297
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
T+ +VIR + I +GSE + I+++ D+ +TE G+R KT RGG ++
Sbjct: 298 TENVVIRYSLARQGHGG-ITVGSETAAMIRNLYVHDVVFDDTEVGLRFKTRRPRGGGGEN 356
Query: 405 IYVRGMTMHTMKWAF-W-MTGN---YGSHADNHYD---PKALPVIQGINYRDIVADNVSM 456
++ + M AF W M G G+ AD K PV + I +DIV D+
Sbjct: 357 LHYERIRMRLRLDAFRWDMLGARMYVGALADRLPALPVNKLTPVYRNIYAKDIVVDSARA 416
Query: 457 AARLEGISGDPFTGICIAN 475
R++GI P TG + N
Sbjct: 417 LVRVDGIPESPMTGFHLQN 435
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
EDCY+ +GDD +A+KSGWDEYGI++ P+ +++RR+T +P+S IA+GSE SGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSETSGGIRDI 59
Query: 377 RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK 436
E+I ++ G+R+KT VGRGG +++I + + + +GN G H D Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 437 ALPVIQGINYRDIVADNV 454
ALPV+ I ++V ++
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 55/386 (14%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S ITD+ V D +N AIN+ ++ S GG ++ +P G++LT L S+ L
Sbjct: 49 SFVITDYHDVKDTLYTN------AINRAITICSEQGGGKVIIPDGEFLTAPIRLKSNVNL 102
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L L + D + +++ R + LI+ T++ +TG NG +DG
Sbjct: 103 HLSDSTVLKFTTDPFFFDLVQT-----RIEGIDCYNISPLIYAYGETNIAITG-NGVMDG 156
Query: 235 QG--ALWW-------------QQFHKGKLKYT-------------------RPYLMEFMY 260
Q + W+ ++ ++ L Y RP +
Sbjct: 157 QADSSNWFSENRIRGIVQEDGKKINEKTLLYEMKEDSIPFKERVFMRENGIRPQFINLYK 216
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
NI + TL SP W +HP+ S NI V+ + + + N DG +P+SC N IEDC
Sbjct: 217 CKNILLEGFTLNRSPFWLIHPLLSENITVRKVKMQS--HGYNNDGCDPESCRNVLIEDCD 274
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG DE G + +P++ +++R + A +A+GSE++GG ++V E+
Sbjct: 275 FDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTGGCRNVWVEN 333
Query: 381 IKAINTESG--VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ E +RIK+ RGG V++I++R + + K + H D D L
Sbjct: 334 CTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVD---DGPYL 390
Query: 439 PVIQGINYRDIVADNVSMAARLEGIS 464
P I+ +I + L+G
Sbjct: 391 PYFHNIHLENITSKKSQYVLHLDGFE 416
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 145/294 (49%), Gaps = 48/294 (16%)
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGAL--WWQQFHKGKLKY--------------------- 250
LI+ +++ +TG G IDGQG++ WW G +KY
Sbjct: 52 LIYAYGESNIAITG-KGIIDGQGSMETWWPMC--GAVKYGWKEGMVAQRNGGRERLLMYG 108
Query: 251 ----------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
RP L+ I I +TLLNSP W +HP++ +++V G+T+
Sbjct: 109 ETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTV 168
Query: 295 IAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLT 354
PN DG +P+SC N IE+C +GDDC+A+KSG +E G + +P++ +++R
Sbjct: 169 FN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM 226
Query: 355 CISPYSATIALGSEMSGGIQDVRAEDIK--AINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ + + +GSE+SGG +++ ED + + N + +RIKT+ RGG +++++VR +T+
Sbjct: 227 MRNGHGG-VVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTV 285
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGD 466
+ A + N P+++ ++ +++ + + + G+ D
Sbjct: 286 GQCREAV-LRINLQYENREKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLEDD 338
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 35/302 (11%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVA- 85
Query: 201 GRGRDAAAGRYTSLIFGT-NLTDVIVTGDNGTIDGQGALWWQ-------------QFHKG 246
A ++ + I + D+++ G G IDGQG WW+ ++ +
Sbjct: 86 -----GAEMKWPAAILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQK 139
Query: 247 KLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
L++ RP + +++ + L S WN+ YS+++LV+ + II
Sbjct: 140 GLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDG 198
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
P+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 199 PSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG 258
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF- 419
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F
Sbjct: 259 VTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFS 316
Query: 420 WM 421
W+
Sbjct: 317 WI 318
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 55/386 (14%)
Query: 116 SASITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTL 174
S ITD+ V D + +AIN+ ++ S GG ++ +P G++LT L S+ L
Sbjct: 49 SFVITDYHDVKD------TLYTNAINRAITICSEQGGGKVIIPDGEFLTAPIRLKSNVNL 102
Query: 175 YLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 234
+L L + D + +++ R + LI+ T++ +TG NG +DG
Sbjct: 103 HLSDSTVLKFTTDPFFFDLVQT-----RIEGIDCYNISPLIYAYGETNIAITG-NGVMDG 156
Query: 235 QG--ALWW-------------QQFHKGKLKYT-------------------RPYLMEFMY 260
Q + W+ ++ ++ L Y RP +
Sbjct: 157 QADSSNWFSENRIRGIVQEDGKKINEKTLLYEMKEDSIPFKERVFMRENGIRPQFINLYK 216
Query: 261 TDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCY 320
NI + TL SP W +HP+ S NI V+ + + + N DG +P+SC N IEDC
Sbjct: 217 CKNILLEGFTLNRSPFWLIHPLLSENITVRKVKMQS--HGYNNDGCDPESCRNVLIEDCD 274
Query: 321 IVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED 380
+GDDC+A+KSG DE G + +P++ +++R + A +A+GSE++GG ++V E+
Sbjct: 275 FDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTGGCRNVWVEN 333
Query: 381 IKAINTESG--VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL 438
+ E +RIK+ RGG V++I++R + + K + H D D L
Sbjct: 334 CTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVD---DGPYL 390
Query: 439 PVIQGINYRDIVADNVSMAARLEGIS 464
P I+ +I + L+G
Sbjct: 391 PYFHNIHLENITSKKSQYVLHLDGFE 416
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 169/336 (50%), Gaps = 31/336 (9%)
Query: 120 TDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKD 179
TDFG D +T+ + AI+ + GG + +P+G + G+ + S L+L K
Sbjct: 58 TDFGLKSDTSVLSTRFVQSAIDACHE---KGGGTVIIPSGVYRIGALFIKSGVNLHLSKG 114
Query: 180 AFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGT-NLTDVIVTGDNGTIDGQGAL 238
L+AS+D+ ++P PS G + + S + + + +TG+ G ID +G +
Sbjct: 115 TTLIASEDIRDYP---EFPSRIAGIEMT---WPSAVLNIMDAENAALTGE-GFIDCRGKV 167
Query: 239 WWQQFHKGKLKYTRPYLMEFMYTD-------------NIQISSLTLLNSPSWNVHPVYSS 285
+W ++ + + +Y + L + D +I + TL+ + W +YS
Sbjct: 168 FWDKYWEMRKEYEKKKLRWIVDYDCKRVRGILVSNSKHITLKDFTLVRTGFWACQILYSD 227
Query: 286 NILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
+ V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+
Sbjct: 228 HCSVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCNDDNICIKAGRDADGLRVNR 287
Query: 344 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
PT+ +VIR T + + GSE SG I++V A D+KA T + +R+K+++ RGG V+
Sbjct: 288 PTENVVIRNCTA-RKGAGLVTCGSETSGSIRNVLAYDLKAYGTGAALRLKSSMNRGGTVE 346
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALP 439
+IY+ + ++K+ + N+ + Y ALP
Sbjct: 347 NIYMTRVKADSVKYVLAVGLNW----NPKYSYSALP 378
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 190/396 (47%), Gaps = 50/396 (12%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+G V +G T NT A + AI+ S + GG + GK+LTGS L + L + K
Sbjct: 51 YGAVNNGTTLNTSAIQKAIDACS---AKGGGIVSFAPGKYLTGSIFLKKNVRLQIDKGVE 107
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
LL SQ+L+++P + + + AA LI + +V VTG+ G ++ QG +W
Sbjct: 108 LLGSQNLDDYPQMDTRIAGIEMKWPAA-----LINIIDQENVAVTGE-GLVNAQGKPFWD 161
Query: 242 QFHKGKLKY-------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
++ + +Y RP + + NI I ++TL + W V +YS +
Sbjct: 162 KYWNMRKEYDPKGLRWIVDYDAQRPRTLLISGSSNITIKAITLQQAGFWTVQVLYSKYVT 221
Query: 289 VQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
V GI + + P+TDGI+ DS T I++C I DD +K+G D G+ PT+
Sbjct: 222 VDGIIVRNNIDGHGPSTDGIDVDSSTYVLIQNCDIDCNDDDFCLKAGRDWDGLRVNKPTE 281
Query: 347 QLVIRRLTCIS-PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+VIR CIS + LGSE SGGI+ V A ++ T +G+ IK+A RGG V+DI
Sbjct: 282 YVVIRY--CISRAGGGLLTLGSETSGGIRHVLATNLSGNGTGNGLNIKSATTRGGTVEDI 339
Query: 406 YVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKAL------------PVIQGI-NYR 447
+ + +TM+ + A +T N+ S + YD + P +GI ++
Sbjct: 340 HFKNITMNNIGNAIQITMNWNPAYSYSKLPDGYDINTVPAHWKKMLTHVEPAEKGIPTFK 399
Query: 448 DIVADNVSM-----AARLEGISGDPFTGICIANATI 478
D+ N+++ A G+ G P G +N I
Sbjct: 400 DVYISNINIKGAKKAINAVGMQGHPLVGFHFSNVNI 435
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 181/399 (45%), Gaps = 69/399 (17%)
Query: 133 TKAFKDAINQ-LSQYSSDGGAQLYVPAGK------WLTGSFNLISHFTLYLHKDAFL--L 183
K + D I + + + +GG ++ +P G + +GS L S+ LY+ ++A + L
Sbjct: 83 VKYYGDVIQKAIDDANKNGGGKVIIPGGTKEEPKIYYSGSITLKSNVELYIEENAIIKFL 142
Query: 184 ASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG-QGALWW-- 240
++ +P++ Y R ++ I+ ++ ++G G +DG W
Sbjct: 143 RNKSNRFYPLV-----YTRWEGVEMMNFSPFIYSYEAENISISG-KGVLDGCADEFNWMP 196
Query: 241 ----------QQFHKGKL--------------------KYTRPYLMEFMYTDNIQISSLT 270
QQ + +L RP ++ + NI I +T
Sbjct: 197 WKFGYFNEEDQQIQRERLFNLGQENADVRTRRIFNDEISTIRPPFIQPYKSKNILIKDIT 256
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+LNSP W V+PV NI + IT+ + + N DG++P+SC + IEDC+ +GDDC+A+
Sbjct: 257 ILNSPFWEVNPVLCENIKIDSITVDSHLY--NNDGVDPESCKDMIIEDCHFTTGDDCIAI 314
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTES 388
KSG + G G+P++ ++IR I +GSE+SGG+ D+ A D + +
Sbjct: 315 KSGRNNEGRNIGVPSQNIIIRN-NKFEDGHGGITIGSEISGGVNDIFAHDNYFDSSELDY 373
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP----KALPVIQGI 444
+R KT RGG +++IYV+ ++ K A HAD Y+ +P+++ I
Sbjct: 374 PIRFKTNAERGGKLENIYVKNSVVNKSKIAVI-------HADFFYEEGTNGNYMPILRNI 426
Query: 445 NYRDIV-----ADNVSMAARLEGISGDPFTGICIANATI 478
+I + + + A L+G P I I + +
Sbjct: 427 TLSNIKTVEGGSIDANNALFLKGFKDAPIENILIEDVYL 465
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 173/368 (47%), Gaps = 49/368 (13%)
Query: 132 NTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW 191
NT A + AI+ + + GG + VP G +LT L ++ L L KDA L+AS ++ +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 192 PVIKPLPSYGRGRD-----AAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK- 245
RG D A + I + +V + G+ GTIDGQGA+WW+++ +
Sbjct: 110 ----------RGDDKTRYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWREN 158
Query: 246 ----GKLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
GK T RP L+ N+ I +TL +SPS++V Y+ ++ + G I++P +
Sbjct: 159 IRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHA 218
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
PNTD I+P N RI + YI DD +A+K+ + G+ + I T
Sbjct: 219 PNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTL--KQG 275
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFW 420
I++GSE +GG+ +V E+ + G+RIK+ G+GG VK+I MH ++
Sbjct: 276 RGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYSNTRMHNVEVPLV 335
Query: 421 MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDP-----------FT 469
+ Y KA P++Q + + A ++ ++ DP F+
Sbjct: 336 FSAYY----------KAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFS 385
Query: 470 GICIANAT 477
I + N T
Sbjct: 386 NITVENLT 393
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 182/402 (45%), Gaps = 50/402 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFTLYL 176
+I G +G + AF AI + S + G ++ VP G + L G L S+ + L
Sbjct: 54 NILKMGARNNGTYNCLPAFNKAIRRAS---AKKGVKIIVPKGTYYLCGPIVLRSNVCIDL 110
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+ A L + D +P++ ++ I+G + +V +TG GTIDG
Sbjct: 111 QEGAVLKFAPDAKYYPMVNT-----SWEGTFLYNHSPFIYGYQVENVAITGK-GTIDGNA 164
Query: 237 ----ALWW-----------QQFHK---------GKLKYTRPYLMEFMYTDNIQISSLTLL 272
A W QQ H+ G+ ++ RP L++ + NI + + ++
Sbjct: 165 MTTFATWRPKQKPAQLLSRQQNHEEVPIVQRKFGQGQWLRPQLIQLYQSKNITLEGVKII 224
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W +H + S NI+ + + A + N DGI+P+ N IED + +GDD VA+KS
Sbjct: 225 NSPFWCIHLLKSENIICRRLRYDAKLV--NNDGIDPEMSRNILIEDIHFNNGDDNVAIKS 282
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESGVR 391
G D G P + +VIR C + +GSEMS G+++V E+ A + GV
Sbjct: 283 GRDNDGWHDACPAENIVIR--NCHFKGLHAVVIGSEMSAGVRNVFVENCDYAGYCKRGVF 340
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN--HYDPKALPVIQGINYRDI 449
IKT RGG+V ++V ++ F++T Y H+ + G++ R +
Sbjct: 341 IKTNPDRGGFVSHLFVNNCKFDEVEDLFYVTSRYAGEGQESMHFSTIEHLYVDGLSARKV 400
Query: 450 VADNVSMAARLEGISGDP-----FTGICIANATIGMAAKHKK 486
A A L+G S P F I + A+ G++ ++ K
Sbjct: 401 RA----AALVLQGTSAKPVQHVSFNAIEVGEASTGISFENVK 438
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 204/454 (44%), Gaps = 84/454 (18%)
Query: 75 QVTKLVPLLIVVALLSQRGAESRKARRLDSFEYNAI--SCRA-HSAS----ITDFGGVGD 127
++ ++ L ++ LL+ A++ D +Y I S R H A IT +G
Sbjct: 4 RIFQIAMLCVLTPLLA-------AAQQWDETQYRQIEQSIRTPHFADKAYVITQYGA--- 53
Query: 128 GKTSNT-----KAFKDAINQLSQYSSDGGAQLYVPAG-KWLTGSFNLISHFTLYLHKDAF 181
KT+NT KA + AI+ S+ GG ++ +PA K+LTG+ L S L + + A
Sbjct: 54 -KTTNTAAKNQKAIQKAIDLCSK---KGGGRVVIPANQKFLTGAIQLKSSVNLEVQEGAV 109
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA--LW 239
L + +P+++ + G + + ++ D+ +TG GTIDG G+ W
Sbjct: 110 LEFAFQPELYPIVE---TSWEGLECF--NLSPCVYAFKAKDIAITG-KGTIDGGGSNDTW 163
Query: 240 WQQFHKGKLKYT-------------------------------------------RPYLM 256
W + + RP L+
Sbjct: 164 WPWNGNPRFGWKEGTISQRGGSRARLLKNGEDGVPMYNEKGERSPERVFTAQDGLRPQLV 223
Query: 257 EFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRI 316
F + I + +TLL SP W +HP++S++I V+ + +I PN DG +P+ C I
Sbjct: 224 SFNKCEGILLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPECCDRVLI 281
Query: 317 EDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV 376
EDC+ +GDDC+A+KSG + G MP+K ++IR + + + +GSE+SGG Q+V
Sbjct: 282 EDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGHGGVV-VGSEISGGCQNV 340
Query: 377 RAED--IKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD 434
A D + + E +RIKT RGG +++I +R +T+ K + + N +
Sbjct: 341 YAHDCVMDSPELERVLRIKTNSCRGGIIENINMRNITVGKCKESV-LKINLDYEHNEICC 399
Query: 435 PKALPVIQGINYRDIVADNVSMAARLEGISGDPF 468
P+++ + ++ + ++ G+ D F
Sbjct: 400 RGYYPIVRNVYMENVTSQQSQYGVQIIGLDEDTF 433
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 187/383 (48%), Gaps = 32/383 (8%)
Query: 96 SRKARRLDSFEYNAISC--RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS +I ++G G+G S T + IN+ + +GG
Sbjct: 685 TRLTFKLEAWESKLISIGKSNREYNIKEYGVKGNG-YSETATLQRIINEAAH---NGGGT 740
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 741 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 794
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT---RPYLMEFMYTDNIQISSLT 270
+ +D + G IDG+G W K+ + RP L+ F +IS L
Sbjct: 795 AFLNFDHSDGVKVYGEGVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLK 848
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
++N SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++
Sbjct: 849 MINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISI 908
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-S 388
KSG DE G G P++ ++I C Y +A+GSE+SGGI++V N S
Sbjct: 909 KSGRDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWS 966
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY---GSHADNHYDPKALPVIQGIN 445
+R K+ RGG V++I +T+ + F + + + HY L ++ I+
Sbjct: 967 PLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRMVPPLSPAHY---PLTCLRNIH 1023
Query: 446 YRDIVADNVSMAARLEGISGDPF 468
+++I + S A + G PF
Sbjct: 1024 FKNINGEAQS-AGTMYGFKETPF 1045
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 168/375 (44%), Gaps = 43/375 (11%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW- 191
TKA + AI+++S+ DGG ++ +PAG W TG L S+ L+L + A L S ++N++
Sbjct: 78 TKAIQKAIDKVSR---DGGGKVVIPAGIWKTGRIELKSNVNLHLEEGAELHFSGNINDYL 134
Query: 192 PVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI--DGQGALWWQQFHKGKLK 249
PV+ R +L++ N ++ +TG + +W +Q ++ K
Sbjct: 135 PVV-----LTRFEGVEVYSLGALVYANNQENIALTGHGKLVAPTTDCEIWKRQCYESIEK 189
Query: 250 YTR--------------------PYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
Y P + N+ I +TL S WN+ PVY +++
Sbjct: 190 YVEQYPDVKERIADGKKGRSVFLPLFVSPTNCKNVLIEGVTLERSLFWNIVPVYCDGVII 249
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLV 349
+G T+ + TDGI+ +S N IE C + GDDC +KSG E GI P++ +V
Sbjct: 250 RGATVDSH-GHGRTDGIDIESTRNVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIV 308
Query: 350 IRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
IR C++ I GSE + I+++ D T+SG+R KT RGG +++
Sbjct: 309 IR--YCLAKRGWGGIVCGSETAAMIRNLYVHDCVFTGTKSGLRFKTRRSRGGGGENLTFE 366
Query: 409 GMTMHTMKWAFW--MTGNYGSHADNHYDPKALPV------IQGINYRDIVADNVSMAARL 460
+ M+ AFW M G D A P+ + I RDI+ ++ S L
Sbjct: 367 RIRMNLTGAAFWWDMLGEEKHVGDLAKRLPARPITPLTPSFKNITIRDIIVESASYFIDL 426
Query: 461 EGISGDPFTGICIAN 475
GI P I N
Sbjct: 427 NGIPETPAENNLIEN 441
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 186/406 (45%), Gaps = 52/406 (12%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A + + G GDG T +T+A + AI+ + + GG K+L+G + S T
Sbjct: 20 AKTCDVKTMGAKGDGVTKDTEAIQKAIDTCTVVTLSGG--------KFLSGPLEIKSGVT 71
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L + A LL S D ++ + R + ++ N +V +TG GTID
Sbjct: 72 LDVETGAMLLGSTDRADYKAATLM------RQPTVLPFLHIV---NADNVKITG-GGTID 121
Query: 234 GQGALWWQQFHKGK------LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
GQG +WW K + RP + ++ ++ + ++T+ N+ W V P YS +
Sbjct: 122 GQGKVWWDYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQVVPYYSDYL 181
Query: 288 LVQGITIIAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
+ + ++AP +PNTDGI+P S ++ +I+ + GDD +A+KSG P++
Sbjct: 182 VFSHLRVLAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKSGAIN-SPGPDAPSE 240
Query: 347 QLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+VI CI +++GSE++GG+ V AE I T+ G+R+K RG D+
Sbjct: 241 DIVITD--CIFESGHGLSIGSEIAGGVHHVHAERISFKGTDQGIRVKANRDRGNDTSDLT 298
Query: 407 VRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPV--------------IQGINYRDIVAD 452
+ +TM ++ + ++ Y PKA+P I+ ++ +
Sbjct: 299 FKDITMDDVRTSILIS---------EYYPKAMPEGEVASAPITRLTPHFHDIHIENVKSV 349
Query: 453 NVSMAARLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
N A + G+ P T I + N +I A K ++ + + G+T
Sbjct: 350 NSDWAGVIVGLPESPVTDISLKNVSI-QAKKGMQIGYANVTLDGVT 394
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 153/315 (48%), Gaps = 33/315 (10%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
D + +T + AINQ ++ +++P G +L G+ L L + A L
Sbjct: 24 DIQQDDTVMLQKAINQGAKEH----LPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKT 79
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ----- 241
++ +P I + + AA ++ + D+++ G G IDGQG WW+
Sbjct: 80 EIEAFPEIDTRVAGIEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGK 133
Query: 242 --------QFHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
++ + L++ RP + +++ I L S WN+ YS+++
Sbjct: 134 DQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDV 193
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
LV+ + II P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + +
Sbjct: 194 LVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSR 252
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I R S Y TI GSE+S GI DV DI ++ G+R+K++ RGG +++I V
Sbjct: 253 IEIARCNIRSGYGVTI--GSEVSAGISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRV 310
Query: 408 RGMTMHTMKWAF-WM 421
+ M +++ F W+
Sbjct: 311 ENLNMMDVQFPFSWI 325
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 181/417 (43%), Gaps = 70/417 (16%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG V D T+A + AI+ +S+ +GG +L +P G TG+ L S L+L
Sbjct: 29 FGVVPDSGAVQTQALQRAIDTISR---EGGGRLLLPGGTIRTGALELKSGVELHLQDRES 85
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL--W 239
+LA +NE P + + ++ LI+ + D+ VTG+ GT+DG W
Sbjct: 86 VLAF--VNEEPELHYPVVFSHWEATPCYNFSPLIYACDAHDIAVTGE-GTLDGGADFGHW 142
Query: 240 WQQFHK-----------------------------------GKLKYTRPYLMEFMYTDNI 264
W H+ G Y RP ++ + +
Sbjct: 143 WNWHHQVEDAWSDDKPDLQLEDRKALRRMNVDGVPVEQRVFGPGHYLRPNFIQTIRCSRV 202
Query: 265 QISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSG 324
+ TL NSP W ++PV ++ V G+T+ + N DG +P+SC I +C +G
Sbjct: 203 LLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDPESCNGVHIRNCRFDTG 260
Query: 325 DDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IK 382
DDC+++KSG D G G+P + ++I + IALGSEMSGGI+ V A +
Sbjct: 261 DDCISLKSGRDRDGRMAGIPCENVLIENNEFADGHGG-IALGSEMSGGIRRVLAVNNRFS 319
Query: 383 AINTESGVRIKTAVGRGGYVKDI--------YVRGMTMH-TMKWAFWMTGNYGSHADNHY 433
+ N +R+KT RGG V+D+ +V G +H TM + G GS
Sbjct: 320 SPNLTYALRLKTNARRGGRVEDVILADSVMDHVHGAAVHGTM---LYEDGRNGSD----- 371
Query: 434 DPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATI-GMAAKHKKVPW 489
LP I +IVA LE P TG+ + N I G+A + + W
Sbjct: 372 ----LPEFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVARPMRSMNW 424
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 32/303 (10%)
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
+ AINQ ++ S +++P G +L G+ L L + A L ++ +P I
Sbjct: 2 LQKAINQGAKEHS----PVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEID 57
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------Q 242
+ + AA ++ + D+++ G G IDGQG WW+ +
Sbjct: 58 TRVAGVEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAE 111
Query: 243 FHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
+ + L++ RP + +++ I L S WN+ YS+++LV+ I II
Sbjct: 112 YDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIR 170
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + ++ I R
Sbjct: 171 HNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIR 230
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M ++
Sbjct: 231 SGYGVTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQ 288
Query: 417 WAF 419
+ F
Sbjct: 289 FPF 291
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 32/303 (10%)
Query: 136 FKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
+ AINQ ++ S +++P G +L G+ L L + A L ++ +P I
Sbjct: 2 LQKAINQGAKEHS----PVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEID 57
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------Q 242
+ + AA ++ + D+++ G G IDGQG WW+ +
Sbjct: 58 TRVAGVEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAE 111
Query: 243 FHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
+ + L++ RP + +++ I L S WN+ YS+++LV+ I II
Sbjct: 112 YDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIR 170
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + ++ I R
Sbjct: 171 HNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIR 230
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M ++
Sbjct: 231 SGYGVTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQ 288
Query: 417 WAF 419
+ F
Sbjct: 289 FPF 291
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 34 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 93
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 94 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 147
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 148 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 206
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 207 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 266
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 267 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 324
Query: 421 M 421
+
Sbjct: 325 I 325
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 175/396 (44%), Gaps = 57/396 (14%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
D + +T + AINQ ++ +++P G +L G+ L L + A L
Sbjct: 17 DIQQDDTVMLQKAINQGAKEH----LPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKT 72
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ----- 241
++ +P I + + AA ++ + D+++ G G IDGQG WW+
Sbjct: 73 EIEAFPEIDTRVAGIEMKWPAA-----VLNVLSAKDILIEG-KGIIDGQGEHWWELYWGK 126
Query: 242 --------QFHKGKLKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
++ + L++ RP + +++ I L S WN+ YS+++
Sbjct: 127 DQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDV 186
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
LV+ + II P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + +
Sbjct: 187 LVEKV-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSR 245
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I R S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V
Sbjct: 246 IEIARCNIRSGYGVTI--GSEVSAGVSDVYIHDINFFQSDCGIRMKSSRERGGVIENIRV 303
Query: 408 RGMTMHTMKWAF-WMTGNYGSH-ADNHYDPKALP------------VIQGINYRDIVADN 453
+ M +++ F W+ + + N D + +P Q RDI N
Sbjct: 304 ENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPDSWQAVAEEIPESKQMTKVRDIHVKN 363
Query: 454 V-----------SMAARLEGISGDPFTGICIANATI 478
V S A L P +C + TI
Sbjct: 364 VQASLSPGYPLPSRAFDLVAFPEKPIEDVCFTHCTI 399
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 25/331 (7%)
Query: 96 SRKARRLDSFEYNAISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS ++ +I ++G G+G S T + IN+ + +GG
Sbjct: 685 TRLTIKLEAWESKFISIGKNNREYNIKEYGVKGNG-YSETATLQRIINEAAH---NGGGT 740
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 741 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 794
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT---RPYLMEFMYTDNIQISSLT 270
+ +D + G IDG+G W K+ + RP L+ F +IS L
Sbjct: 795 AFLNFDHSDGVKVYGEGVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLK 848
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
++N SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++
Sbjct: 849 MINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISI 908
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-S 388
KSG DE G G P++ ++I C Y +A+GSE+SGGI++V N S
Sbjct: 909 KSGRDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWS 966
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF 419
+R K+ RGG V++I +T+ + F
Sbjct: 967 PLRFKSQPSRGGTVENITFEDITIKGARSIF 997
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 148/301 (49%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN RI +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDSSTNVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIHDINFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIRDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ +++ N+P W HP S N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG D EYG P K+ +IR T S +
Sbjct: 387 FDPDACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYG-----PAKRHLIRNCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N VR+KT + RGGYVKD +V+G+T+
Sbjct: 441 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTL 497
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ +++ N+P W HP S N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG D EYG P K+ +IR T S +
Sbjct: 387 FDPDACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYG-----PAKRHLIRNCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+T+
Sbjct: 441 ITLGSEMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 497
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ +++ N+P W HP S N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG D EYG P K+ +IR T S +
Sbjct: 387 FDPDACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYG-----PAKRHLIRNCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+T+
Sbjct: 441 ITLGSEMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 497
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 184/412 (44%), Gaps = 62/412 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT-GSFNLISHFTLYLH 177
ITDFG VGD + + AF D + Q+ + GA++ VP G +L G +++ + ++ +
Sbjct: 54 ITDFGAVGDSLSDSKPAF-DKVIQICK--EQNGARIIVPPGVYLLRGPIHMVDNMSIDIQ 110
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAA-AGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K A L+ S + ++ LP+ + Y+ I+ + +V + G+ GTIDG
Sbjct: 111 KGAKLIFSNEAKDY-----LPTVLTSWEGTFLYNYSPFIYAYQVKNVAIIGE-GTIDGNA 164
Query: 237 A----LWW----------------------QQFHKGKLKYTRPYLMEFMYTDNIQISSLT 270
LW +QF +G + RP ++F NI I +T
Sbjct: 165 KDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGH--FLRPQFIQFFECKNILIEGVT 222
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ NSP W VH + S NI + + A + N DG +P+ N IED + DD +A+
Sbjct: 223 ITNSPFWCVHFLKSENITARKVKFDA--FNKNNDGFDPEYSKNVLIEDIDFNNADDNIAI 280
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIK-AINTESG 389
K+G D G G+ ++ ++IR C + +GSEMS G+Q+V E+ + G
Sbjct: 281 KAGRDYEGRRIGLTSENIIIR--NCRFKGLHGVVIGSEMSAGVQNVFVENCTYGGYCKRG 338
Query: 390 VRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH------------ADN---HYD 434
+ +K+ RGG+++DIY+ + ++ F++T Y DN
Sbjct: 339 IYLKSNPDRGGFIRDIYINNVVFGEVEDCFFVTSYYHGEGNGFETDIRNVFVDNLTCRSA 398
Query: 435 PKALPVIQGI---NYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAK 483
A VIQG RDI NV + + +S I + IG A K
Sbjct: 399 ANAGLVIQGYPTKKVRDIQFTNVKIDSCKTALSFTNVENIVFNDVVIGEAVK 450
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 188/383 (49%), Gaps = 32/383 (8%)
Query: 96 SRKARRLDSFEYNAISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS ++ +I ++G G+G S T + IN+ +GG
Sbjct: 685 TRLTIKLEAWESKLISIGKNNREYNIKEYGVKGNG-YSETATLQRIINEAVH---NGGGT 740
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 741 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 794
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT---RPYLMEFMYTDNIQISSLT 270
+ +D + G IDG+G W K+ + RP L+ F +IS L
Sbjct: 795 AFLNFDHSDGVKVYGEGVIDGKGVEW------KKIPFGNSGRPRLLCFTDCPGGKISGLK 848
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
++N SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++
Sbjct: 849 MINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISI 908
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-S 388
KSG DE G G P++ ++I C Y +A+GSE+SGGI++V N S
Sbjct: 909 KSGRDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGGIRNVTIRSCLMDNENWS 966
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYG---SHADNHYDPKALPVIQGIN 445
+R K+ RGG V++I +T+ + F + + + HY L ++ I+
Sbjct: 967 PLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRMVPPLSPAHY---PLTCLRNIH 1023
Query: 446 YRDIVADNVSMAARLEGISGDPF 468
+++I + S A + G PF
Sbjct: 1024 FKNINGEAQS-AGTMYGFKEAPF 1045
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 17 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 76
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 77 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 130
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 131 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 189
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 190 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 249
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 250 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 307
Query: 421 M 421
+
Sbjct: 308 I 308
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 153/334 (45%), Gaps = 34/334 (10%)
Query: 127 DGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQ 186
D + +T + AINQ ++ S +++P G +L G+ L L + A L
Sbjct: 17 DIQQDDTVMLQKAINQGAKEHS----PVFIPEGIYLVGALFLKDKSHLIFEEGAVLKGKT 72
Query: 187 DLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF--- 243
++ +P I + ++ + I I+ G IDGQG WW+ +
Sbjct: 73 EIEAFPEIDTRVA------GVEMKWPAAILNVLSAKHILIEGKGIIDGQGEHWWELYWGK 126
Query: 244 -----------HKG-----KLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
KG RP + +++ I L S WN+ YS+++
Sbjct: 127 DQKSGTRAEYDRKGLCWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDV 186
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
LV+ I II P+TDGI+ DS T+ RI +C + GDDC+A+KSG D G + +
Sbjct: 187 LVEKI-IIRHNDGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSR 245
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+ I R S Y TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V
Sbjct: 246 IEIARCNIRSGYGVTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRV 303
Query: 408 RGMTMHTMKWAF-WMTGNYGSH-ADNHYDPKALP 439
+ M +++ F W+ + + N D + +P
Sbjct: 304 ENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMP 337
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 104/174 (59%), Gaps = 12/174 (6%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ +++ N+P W HP S N++++G+T + PN DG
Sbjct: 331 GLGHYLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDG 388
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIAL 365
+PD+CT+ EDC +GDDC+A+KSG D + YG P K+ +IR T S + I L
Sbjct: 389 FDPDACTDVLCEDCTFNTGDDCIAIKSGKDR-DVEYG-PAKRHLIRNCTMNSGHGG-ITL 445
Query: 366 GSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
GSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+T+
Sbjct: 446 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 499
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 37/311 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI++ S + GG + + G +L G+ + S L L
Sbjct: 58 SANSFGAVADSTRLSTEAIQKAIDECS---AAGGGTVILAPGYYLVGALFIKSGVNLQLD 114
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI------VTGDNGT 231
K LLAS D+N +P R AG +I+ + + +VI ++G+ G
Sbjct: 115 KGVTLLASTDINNYPEF---------RSRIAG--IEMIWPSAVLNVIKQKNVAISGE-GM 162
Query: 232 IDGQGALWWQQFHKGKLKYTRPYLMEFMYTD-------------NIQISSLTLLNSPSWN 278
ID +G +W Q+ + +Y + L + D ++ + TL+ + W
Sbjct: 163 IDCRGKKFWDQYWSMRREYEKKGLRWAVDYDCKRVRGILVERSTDVTLKDFTLMRTGFWA 222
Query: 279 VHPVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDE 336
+YS + G+TI + P+TDG++ DS TN IE+C I DD + +KSG D
Sbjct: 223 CQILYSDYCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKSGRDT 282
Query: 337 YGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAV 396
G+ PT+ +VIR T + I GSE SGGI+++ D+ A T S +R+K+A+
Sbjct: 283 DGLRVNRPTENVVIRNCT-TRKGAGLITCGSETSGGIRNILGHDLTAQGTWSVLRLKSAM 341
Query: 397 GRGGYVKDIYV 407
RGG +++IY+
Sbjct: 342 NRGGIIENIYI 352
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 154/329 (46%), Gaps = 49/329 (14%)
Query: 115 HSASITD--FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
H ++T+ + GDG T NT A + AI+ G +Y+PAG +LTG+ L S
Sbjct: 113 HRINVTEAPYWAKGDGITKNTAALQRAIDACGP-----GDAVYLPAGTYLTGALQLHSDM 167
Query: 173 TLYLHKDAFLLASQDLNEWPVIKP-LPSYGRGRDAAAGRYTSLIF--------GTNLTDV 223
LYL + A L + L ++ +P +PS G + Y+SL+ G N +V
Sbjct: 168 ELYLEEGAVLQGTAQLVDY---QPRIPSRFEGIERRC--YSSLLNLGKMDHDDGYNCVNV 222
Query: 224 IVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFM------------------------ 259
++ G GTI G G + ++ + YL E +
Sbjct: 223 VIRG-KGTIAGGGKALADAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVRPRLVNLS 281
Query: 260 YTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDC 319
N+ IS LTL +SPSW + +YS NI+ + N DG +PDS TN +
Sbjct: 282 NCQNVWISGLTLKDSPSWILQMIYSDNIVTDHCAFHSEGIW-NGDGWDPDSSTNCTLFAS 340
Query: 320 YIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAE 379
+ +GDD VA+KSG + G A G P+ + I C + +GSEMSGG++DV+
Sbjct: 341 ELYTGDDSVAIKSGKNPEGNAIGRPSAHIYI--FDCRVGSGQGLCIGSEMSGGVEDVQIW 398
Query: 380 DIKAINTESGVRIKTAVGRGGYVKDIYVR 408
D N+ SG+ IK RGGYV+ + VR
Sbjct: 399 DCDLENSFSGLEIKATAKRGGYVRGVTVR 427
>gi|297811865|ref|XP_002873816.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319653|gb|EFH50075.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 142/304 (46%), Gaps = 49/304 (16%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+T FG +GDG+T +TKAF A + + + ++ VP GK T L
Sbjct: 40 SVTSFGAIGDGETDDTKAFLKAWEAVCKGGRN--TKILVPQGK------------TFMLK 85
Query: 178 KDAFLLASQDLNEWPVIKPLPSYG-RGRDAA------AGRYTSLIFGTNLTDVIVTGDNG 230
AF+ P S+ RG A AGRY + I ++ ++VTG G
Sbjct: 86 PLAFI--------GPCKSSSISFSIRGNLVAPGYTWYAGRYPTWISFDSINGLVVTG-GG 136
Query: 231 TIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQ 290
TID +G+LWW + TRP M F + ++IS+L LNSP +V S NI V
Sbjct: 137 TIDARGSLWWGNVN------TRPSAMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVT 190
Query: 291 GITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA--YGMPTKQL 348
GI + AP SPNTDGI+ +C I D I +GDDC+A+ SG I + P +
Sbjct: 191 GIRMTAPGDSPNTDGIDISNCKGVHIHDSVIATGDDCIAINSGSSHINITGIFCGPGHGI 250
Query: 349 VIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVR 408
+ L ++ +++VR ++ NT++GVRIKT GY + I
Sbjct: 251 SVGSLGVTGDFAT-----------VEEVRVKNCTFTNTQNGVRIKTYQNGSGYARKISFE 299
Query: 409 GMTM 412
+ M
Sbjct: 300 DIIM 303
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 169/385 (43%), Gaps = 57/385 (14%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T+A AI+ S + GG + +P G + T L S+ L+L L D +P
Sbjct: 63 TEAISRAIDTCS---AQGGGTVLIPNGTYRTAPIRLKSNVNLHLSDSTVLQFVTDPALFP 119
Query: 193 VIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG--ALWW---------- 240
+ R + LI+ T++ +TG G +DGQ + W+
Sbjct: 120 TV-----LTRIEGIDCHNVSPLIYAYGETNIALTG-KGILDGQADTSNWFSPARLKSIDE 173
Query: 241 --QQFHKGKLKYT-------------------RPYLMEFMYTDNIQISSLTLLNSPSWNV 279
++ ++ L Y RP + NI + TL SP W +
Sbjct: 174 NGKEINEKTLLYQMMKDSIPASRRVFAGEKGIRPQFINLYKCKNILLEGFTLHRSPFWLI 233
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
HP+ S NI V+ +I N DG +P+SC N I+ C +GDDC+A+KSG DE G
Sbjct: 234 HPLLSENITVR--KVILQSHGRNNDGCDPESCKNVLIDSCSFDTGDDCIAIKSGRDEDGR 291
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG--VRIKTAVG 397
+ +P++ +++R + A +A+GSE++GG Q+V E+ + + E +RIK+
Sbjct: 292 YWNIPSENIIVRNCL-MKDGHAGVAIGSEITGGCQNVWVENCRMDSPELDRIIRIKSNSE 350
Query: 398 RGGYVKDIYVRGMTMHTMKWAFW-MTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSM 456
RGG VK+I+VR +T+ K + + NY D Y P I+ +I + +
Sbjct: 351 RGGEVKNIFVRDITVGECKESILGIELNYWHVEDGPYP----PYFHNIHLENITSQKSNY 406
Query: 457 AARLEGISG-----DPFTGICIANA 476
++G G D F C N
Sbjct: 407 LLHIDGTEGKIQARDIFIKNCTFNG 431
>gi|375148592|ref|YP_005011033.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062638|gb|AEW01630.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 482
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 24/304 (7%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
IT +G V DGKT NT A + AI++ Q GG ++ PAG WL+G+ L TL K
Sbjct: 27 ITRYGAVADGKTINTAAIQKAIDECHQ---KGGGKVVFPAGSWLSGTIVLKDQVTLQFDK 83
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA- 237
DA LL S D+N++ I P + G G D +L+ + ++ + GD G IDGQGA
Sbjct: 84 DARLLGSTDINDYQNIDPF-TDGLGVDVGW----ALLVAVDAKNIGIEGD-GAIDGQGAK 137
Query: 238 LWWQQFHKGKLKYT-----RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
L QQ + RP+L+ + +N+ + +TL + +W H S I ++ +
Sbjct: 138 LKEQQITTDTRPESQRWGRRPFLVRIVRCENVTVKGITLNYAAAWTSHYFQSKKITIENV 197
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
I++ + N DGI+ D C + RI++C IVSGDD + K+ A M +V+
Sbjct: 198 KIVSHGVAHN-DGIDIDGCQDVRIKNCDIVSGDDALCFKT------TASTMACSNIVVSG 250
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ S A I +G+E +++ +T +G IK G +++++ + +TM
Sbjct: 251 MRLKSNQGA-IKMGTESMAPFENITITGCYIYDTNNG-GIKLLTVDGAHLRNVNISDITM 308
Query: 413 HTMK 416
+K
Sbjct: 309 VNVK 312
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 144/299 (48%), Gaps = 34/299 (11%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVA- 85
Query: 201 GRGRDAAAGRYTSLIFGT-NLTDVIVTGDNGTIDGQGALWWQ-------------QFHKG 246
++ + I + D+++ G G IDGQG WW+ ++ +
Sbjct: 86 -----GVEMKWPAAILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQK 139
Query: 247 KLKYT------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTS 300
L++ RP + +++ + L S WN+ YS+++LV+ + II
Sbjct: 140 GLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDG 198
Query: 301 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYS 360
P+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 199 PSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG 258
Query: 361 ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF 419
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M + + F
Sbjct: 259 VTI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVHFLF 315
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 32/343 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ +G GDGKT NT + AI+ ++ GG ++ P G++LTGS + L +
Sbjct: 48 NVAKYGAKGDGKTLNTNTIQKAIDDCAK--KGGGIVVFNP-GEYLTGSVFVKKGVNLRID 104
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K +L SQD+ ++ VI + AA LI + D +++G G I+ QG
Sbjct: 105 KGVTILGSQDIKDYKVIDTRVAGIEMEWPAA-----LINVLDQEDAMISG-KGLINAQGK 158
Query: 238 LWWQQFHKGKLKYT-------------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
++W + + +Y RP + + N+ I L + + W V VYS
Sbjct: 159 VFWDYYWNLRKEYEPKGLRWIIDYDARRPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYS 218
Query: 285 SNILVQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
S + V G+TI V P+TDG++ DS + +++ I DD +K+G D G+
Sbjct: 219 SYVTVDGLTINNNVGGHGPSTDGVDIDSSSWILVQNTDIDCNDDNFCIKAGRDADGLRVN 278
Query: 343 MPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
P + +VIR C++ + LGSE SGGI+++ A +IK + T + + IK+AV RGG+
Sbjct: 279 RPCEYVVIR--DCVARKGGGLLTLGSETSGGIRNIYASNIKGMATSNCLNIKSAVTRGGF 336
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKALP 439
V+++ + +TM ++ + N+ S YD ++P
Sbjct: 337 VENVLLENVTMDSVGTVLQVNMNWNPAYSYSELPKGYDYNSIP 379
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 140/285 (49%), Gaps = 28/285 (9%)
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+++P G +L G+ L L + A L ++ +P I + + AA
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVAGIEMKWPAA----- 70
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGKLKY------TRPY 254
++ + D+++ G G IDGQG WW+ ++ + L++ RP
Sbjct: 71 ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 129
Query: 255 LMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNT 314
+ +++ I L S WN+ YS+++LV+ + II P+TDGI+ DS T+
Sbjct: 130 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDV 188
Query: 315 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 374
RI +C + GDDC+A+KSG D G + ++ I R S Y TI GSE+S GI
Sbjct: 189 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYGVTI--GSEVSAGIS 246
Query: 375 DVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF 419
DV DI ++ G+R+K++ RGG +++I V + M +++ F
Sbjct: 247 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 291
>gi|114841683|dbj|BAF32143.1| pollen allergen [Chamaecyparis obtusa]
Length = 419
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 189/427 (44%), Gaps = 60/427 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI----SHFT 173
++ +G VGDGK +T+AF+ A N + +S A L VPA K + NL+
Sbjct: 30 NVEQYGAVGDGKHDSTEAFETAWNAACKKAS---AVLVVPANKKFFVN-NLVFRGPCQPH 85
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L D ++A D W K + + LTD + G G ID
Sbjct: 86 LSFKVDGTIVAQPDPARWKNSKIWLQFAQ-----------------LTDFNLMG-TGVID 127
Query: 234 GQGALWWQQFHKGKLKYT----------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
GQG WW G+ K RP ++ Y+ ++ + LTL+NSP +++
Sbjct: 128 GQGQQWW----AGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGE 183
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
+ +QG+ I AP SPNTDGI+ + IE C I +GDDC+A+ +G
Sbjct: 184 CEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG---------- 233
Query: 344 PTKQLVIRRLTCISPYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
+ + I+ L C + +I +LG + S + V K I+T++G+RIKT G G
Sbjct: 234 -SSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGL 292
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA-RL 460
I + M + + Y + A + ++ IQG+ Y++I + + AA +L
Sbjct: 293 ASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQL 352
Query: 461 EGISGDPFTGICIANATIGMAAKHKKVPWTCADIG--GMTSGVTPPPCE-LLPDQGPEKI 517
P TGI ++N ++ + + P +C D G SG P C+ L P P++
Sbjct: 353 MCSDSVPCTGIQLSNVSLKLTSGK---PASCVDKNARGFYSGRLIPTCKNLRPGPSPKEF 409
Query: 518 RACDFPT 524
PT
Sbjct: 410 ELQQQPT 416
>gi|15237927|ref|NP_197222.1| polygalacturonase [Arabidopsis thaliana]
gi|10177065|dbj|BAB10507.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332005012|gb|AED92395.1| polygalacturonase [Arabidopsis thaliana]
Length = 421
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 144/297 (48%), Gaps = 35/297 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+T FG +GDGKT +TKAF A + + + ++ VP GK +F L +
Sbjct: 40 SVTSFGAIGDGKTDDTKAFLKAWEAVCKGGHN--RKILVPQGK----TFMLKPLTFIGPC 93
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K + + S N ++ P G AGRYT+ I ++ ++VTG GTIDG+G+
Sbjct: 94 KSSTISLSIRGN---LVAP------GYTWYAGRYTTWISFDSINGLVVTG-GGTIDGRGS 143
Query: 238 LWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
LWW + RP M F + ++IS+L LNSP +V S NI V+G+ + AP
Sbjct: 144 LWWGNVNN------RPCAMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAP 197
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA--YGMPTKQLVIRRLTC 355
SPNTDGI+ +C I D I +GDDC+A+ SG I + P + + L
Sbjct: 198 GDSPNTDGIDISNCIGVHIHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGV 257
Query: 356 ISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ +++VR ++ T++GVRIKT GY + I + M
Sbjct: 258 TGDFET-----------VEEVRVKNCTFTKTQNGVRIKTYQNGSGYARKISFEDINM 303
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 169/351 (48%), Gaps = 46/351 (13%)
Query: 117 ASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYL 176
S FG V D +T A + AI+ + GG + + G +LTG+ + S L +
Sbjct: 84 VSANSFGAVADSTVLSTDAIQKAIDSCAL---SGGGTVTLQPGYYLTGALFVKSGVNLQI 140
Query: 177 HKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVI------VTGDNG 230
K L+A D++ +P R AG +++ + ++I V+G+ G
Sbjct: 141 SKGVTLIACSDIHCYPEF---------RSRIAG--IEMVWPAAVINIIGEEKASVSGE-G 188
Query: 231 TIDGQGALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSP 275
T+D +G ++W ++ + +Y R L+E + ++ +S+ TL+ +
Sbjct: 189 TLDCRGKIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVE--NSSDVTLSNFTLMRTG 246
Query: 276 SWNVHPVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
W +YS + V G+ I + P+TDGI+ DS TN IE+C I DD + +K+G
Sbjct: 247 FWGCQILYSDHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKAG 306
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIK 393
D G+ PT+ +VIR T + I GSE SGGI++V A D+KA T + +++K
Sbjct: 307 RDADGLRVNRPTENIVIRNCT-VHKGGGLITCGSETSGGIRNVLAHDLKAFGTSNVLQLK 365
Query: 394 TAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKALP 439
+A+ RGG +++IY+ + ++ F N+ S +Y K LP
Sbjct: 366 SAMTRGGVIENIYITRVEAKNVRRIFGADPNWNPKYSYSTLPENYKGKELP 416
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 167/346 (48%), Gaps = 48/346 (13%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
S + I +++ +T FG VGDG T +++AF A + + DG Q VPAG
Sbjct: 11 SLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDG--QFVVPAG---- 64
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL------PSYGRGRDAAAGRYTSLIFG 217
T L F + + PV + PS G + G I
Sbjct: 65 --------MTFMLQPLKFQGSCKST---PVFVQMLGKLVAPSKGNWK----GDKDQWILF 109
Query: 218 TNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSW 277
T++ +++ GD G I+GQG+ WW+ HKG +RP ++F +N+++S LT L+SP
Sbjct: 110 TDIEGLVIEGD-GEINGQGSSWWE--HKG----SRPTALKFRSCNNLRLSGLTHLDSPMA 162
Query: 278 NVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
++H + + + + I AP +SPNTDGI+ + +N I+DC I +GDDC+A+ SG
Sbjct: 163 HIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG---- 218
Query: 338 GIAYGMPTKQLVIRRLTCISPYSATI-ALGSE-MSGGIQDVRAEDIKAINTESGVRIKTA 395
T + I + C + +I +LG + + +++V ++ T +G RIKT
Sbjct: 219 -------TSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTW 271
Query: 396 VGRGGYVKDIYVRGMTMHTMKWAFWMTGNY-GSHADNHYDPKALPV 440
G GY + I G+T+ ++ + Y G +DN D K+ V
Sbjct: 272 QGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAV 317
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 39/368 (10%)
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YG 201
+ Q SS GG + +PAGKW++G L S L++ +DA ++ ++ LP+ +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWISGRIELKSFVELHIARDAEIVFGGCAEDY-----LPAVFT 103
Query: 202 RGRDAAAGRYTSLIFGTNLTDVIVTGD----------------NGTIDGQGALWW----- 240
R + I+ N ++ +TG+ NG + + W
Sbjct: 104 RHEGVEIMGPGAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVE 163
Query: 241 QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 164 QRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-T 222
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G T+ +VIR
Sbjct: 223 EVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHG 282
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD-IYVRGMTMHTMKW 417
+ I +GSE +G I+++ D T +G+R KT RGG IY R ++ K
Sbjct: 283 HGG-ITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKA 341
Query: 418 AFW-MTGN--YGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
W + GN Y Y +A+ P I +D + ++ GI PF+
Sbjct: 342 FTWDLLGNAYYMGELAARYPERAVDHLTPNISNTVIKDFIVESSKQFFTANGIPEIPFSN 401
Query: 471 ICIANATI 478
I N TI
Sbjct: 402 TLIENGTI 409
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 167/375 (44%), Gaps = 55/375 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ DFG GDG T +T A + I+ + + Q+Y+PAG +L+G+ NL S + ++
Sbjct: 137 NVRDFGASGDGSTKDTAAIQKTIDACKEKN----CQVYLPAGTYLSGALNLHSDMSFFVD 192
Query: 178 KDAFLLASQDLNEWP----------VIKPLPSYGR-----GRDAAAGRYT---------- 212
A L S++L ++P V+ P+Y D+ AG T
Sbjct: 193 AGAQLKPSRELADYPFTSARHDIEDVMGRNPAYSSLLNAGEMDSKAGVTTRNIKIMGPGT 252
Query: 213 ------SLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQI 266
L+ D GD G +D ++ H G + +Y D I I
Sbjct: 253 IGDEANGLLLRKAYDDFTHNGDGGNLDIPSDIYQPGQHVGGGSLISMKNVGGVYLDGIHI 312
Query: 267 SSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 326
N W V PVYS +I G+ ++ V N DG +P+S +N I +GDD
Sbjct: 313 R-----NGMMWTVVPVYSKDITAYGLQLVTSVH--NGDGFDPNSSSNVWILGTSFSTGDD 365
Query: 327 CVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINT 386
C A+KSG D GIA P++ + R S + + +GSEMSGG+++V ED +
Sbjct: 366 CSAIKSGKDAEGIAIARPSENIYFRGDVFNSGHGG-VTIGSEMSGGVRNVFVEDSTIVPV 424
Query: 387 E-------SGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKA-L 438
+ G+R+K + RGGYV++I VR ++ + + NY + + D + L
Sbjct: 425 DLTSGAVNPGIRVKVSPKRGGYVRNIQVRDSVINKIS----VITNYDRTSVDDLDSQTPL 480
Query: 439 PVIQGINYRDIVADN 453
P + + I A N
Sbjct: 481 PQTENFKFSHITAPN 495
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 181/399 (45%), Gaps = 75/399 (18%)
Query: 135 AFKDAINQLSQYSSDGGAQLYVPAGK-------WLTGSFNLISHFTLYLHKDAFL-LASQ 186
A + AI++ + S+ G ++ +P + + TG+ L S+ L + K+A L
Sbjct: 90 AIQRAIDEAN--SNKDGGKVIIPGSENPEAPNVYYTGAITLKSNVILEIQKNAILRFVRN 147
Query: 187 DLNE-WPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW----W- 240
NE +P++ Y R ++ I+ ++ + G+ G +DG + W
Sbjct: 148 KTNEFYPLV-----YTRWEGVEMMNFSPFIYSYEAENIAIVGE-GVLDGNADEFNWMPWK 201
Query: 241 --------QQFHKGKL--------------------KYTRPYLMEFMYTDNIQISSLTLL 272
QQ + +L RP ++ + NI I + ++
Sbjct: 202 FGYFKEEDQQIQRERLFELGQKNADVRTERIFGDDVSTIRPPFIQPYKSKNILIKDVKII 261
Query: 273 NSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 332
NSP W ++PV NI V I + + N DG++P+SC + IE+CY ++GDDC+A+KS
Sbjct: 262 NSPFWEINPVLCENIKVDNIKVGTNLY--NNDGVDPESCKDMIIENCYFLTGDDCIAIKS 319
Query: 333 GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAED--IKAINTESGV 390
G + G G+PT+ ++IR + I +GSE+SGG+ D+ A D + + +
Sbjct: 320 GRNNEGRNIGVPTENVIIRYNEFKDGHGG-ITIGSEISGGVNDIFAHDNYFDSKELDYPI 378
Query: 391 RIKTAVGRGGYVKDIYVRGMTMHTMKWA------FWMTGNYGSHADNHYDPKALPVIQGI 444
R KT RGG +++IYV+ T++ K A F+ G G H P+++ I
Sbjct: 379 RFKTNAERGGKLENIYVKNSTVNKSKIAVIHADFFYEEGTNGDHK---------PILRNI 429
Query: 445 NYRDI-VADNVSMAAR----LEGISGDPFTGICIANATI 478
+I + S+ A+ ++G P I I +A +
Sbjct: 430 TLENIKTVEGGSIDAKNALYIKGFEHAPIENIVIEDAIL 468
>gi|315570530|gb|ADU33269.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 395
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 175/385 (45%), Gaps = 24/385 (6%)
Query: 102 LDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW 161
L + + IS + +T +G G+ +T A AIN + GG ++ P G++
Sbjct: 5 LATIQLLVISAVSAIHDVTKYGADRTGRVPSTDAIARAINDAETH---GGGLVHFPPGRY 61
Query: 162 LTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAG--RYTSLIFGTN 219
LTG L S+ + + + D P + P P +G+ D +T LI
Sbjct: 62 LTGPIELKSNMIMDVGDGTIITFLDD----PALYP-PLHGKLPDGQRRILPFTPLIRAWG 116
Query: 220 LTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+V + G N DG+G +WW + TRP + F N+ + T+ +SP +NV
Sbjct: 117 QKNVGIRG-NVIFDGRGEVWWDRLPP---PATRPIFINFFDCHNVVLKGFTIKSSPMFNV 172
Query: 280 HPVYSSNILVQGITIIAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 335
+ +YS+ I++ GI I P + PNTDGIN S I + +GDDC+A+ + W
Sbjct: 173 NILYSNGIVIDGIRIRNPESYHGKGPNTDGINVVSVRRLHITGVDVATGDDCIAINA-WG 231
Query: 336 EYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTA 395
+PT+ ++I + +S +++GS +GG++++ + T G+ IKT
Sbjct: 232 HG--KERIPTEDVLIED-SHMSIGHGGVSIGSVTAGGLRNITVRNCVFDGTTRGLLIKTN 288
Query: 396 VGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADN 453
RGG ++DI+ + M+ M+W + + D+ P P ++ I Y ++ +
Sbjct: 289 RERGGTIEDIHYENIVMNNMRWEGIAITDLYNDKDSGRKPIGDQTPFVRNIKYNNVRGSS 348
Query: 454 VSMAARLEGISGDPFTGICIANATI 478
L G+ P I I N I
Sbjct: 349 KKSPIMLIGLPEAPVENIEIENCDI 373
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 177/400 (44%), Gaps = 51/400 (12%)
Query: 133 TKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP 192
T + AI+ ++Q GG + +P GKWLTG +L S L+L + A L S ++ +
Sbjct: 90 TAIIQKAIDDINQ---QGGGTVIIPRGKWLTGRISLKSFVNLHLEEGAELHFSGEIKNY- 145
Query: 193 VIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTG------------------------ 227
LP+ + R + I+ ++ VTG
Sbjct: 146 ----LPAVFTRNEGIELMSLGACIYANGQENIAVTGKGKLIGPPLDSPLRKRFMNVGVIE 201
Query: 228 DNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
D +D + + H + + P + + NI I ++L +P WNV P+Y N+
Sbjct: 202 DVVPLDKPVSERVYEGHNDEFIFL-PMFISPINCKNILIEGISLERTPFWNVVPIYCENV 260
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
+++GIT+ + V P DGI+ +S N IE C + GDDC +K+G E G+ PT+
Sbjct: 261 IIRGITVNS-VGIPRGDGIDIESSKNVLIEYCTLSCGDDCFTMKAGRGEDGLRVNKPTEN 319
Query: 348 LVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIY 406
+V+R C++ I +GSE + I ++ D +T G+R KT RGG + Y
Sbjct: 320 VVVR--FCLAKEGHGGITVGSETAAKINNLYVHDTVFDDTGVGIRFKTRRPRGGGGANYY 377
Query: 407 VRGMTMHTMKWAF-W-MTGNYGSHADNHYDPKALPV------IQGINYRDIVADNVSMAA 458
+ M+ AF W M G+ ALP+ + + +DI+ +N
Sbjct: 378 YERIRMNLRDEAFRWDMLGSPMHVGKLAERLPALPINSLTPSFKNTSAKDIIVENAKAFV 437
Query: 459 RLEGISGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
R+EGI P + NA I K K++ +T D G +T
Sbjct: 438 RIEGIPETPMQNFRLENAVI----KSKRL-FTAQDAGNIT 472
>gi|139438280|ref|ZP_01771833.1| Hypothetical protein COLAER_00822 [Collinsella aerofaciens ATCC
25986]
gi|133776477|gb|EBA40297.1| polygalacturonase (pectinase) [Collinsella aerofaciens ATCC 25986]
Length = 531
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 160/381 (41%), Gaps = 51/381 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++ D G GD + +T + AI + DG ++ +PAG + S L S+ + L
Sbjct: 82 NVRDCGAKGDAEHDDTTNIQAAIMACPK---DG--RVLIPAGSYRIKSLFLKSNINIELV 136
Query: 178 KDAFLLASQDLNEWPVI--------------KPLPSYGRGRDAAAGRYTSLIFGTNLTDV 223
A LLA D I + GR + Y S G + DV
Sbjct: 137 DGAVLLARHDRAALAYIPGTVTGNEGAGYAGTDMLPLGRWEGESFSTYCSTFTGLGVHDV 196
Query: 224 IVTGDNGTIDGQGAL----WWQQFHKGKLK------YTRPYLMEFMYTDNIQISSLTLLN 273
+ G G IDGQ WW + K + RP ++ N+ ++ T+ N
Sbjct: 197 CIYG-RGAIDGQTDFAEDNWWNKDFKNIFRPEEGREVARPRMIFLSECQNVSLAGFTVRN 255
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SP+WN+HPV ++ ++I P S NTDG +P+SC RI C GDDC+A+KSG
Sbjct: 256 SPAWNIHPVLCEHVDALCLSIEGPKNSHNTDGFDPESCGFVRILGCQFSVGDDCIAIKSG 315
Query: 334 WDEYGIAYGM-PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRI 392
+ GI + P V+ + + LGSE +GGI+D+ T+ G+R+
Sbjct: 316 --KLGIEPELRPATHDVLISHCYMHDGHGAVVLGSEAAGGIKDLTVSKCLFERTDRGLRV 373
Query: 393 KTAVGRGGYVKDIYVRGMTMHTMKW-----AFWMTGNYGSHADNHYD----PKALPV--- 440
KT GRG KD G+T ++ F + Y D D +ALPV
Sbjct: 374 KTRRGRG---KDAVNEGITFEHIRMDEVLTPFVVNSFYFCDKDGKTDYVQSREALPVDDR 430
Query: 441 ---IQGINYRDIVADNVSMAA 458
+ DI A N AA
Sbjct: 431 TPGFGATTFCDIEATNCHAAA 451
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 158/309 (51%), Gaps = 27/309 (8%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+TD+G DGKT NT A + AI+ ++ G ++ P G +L+G+ L S+ L L +
Sbjct: 20 VTDYGAKADGKTVNTVALQKAIDAAAKAGK--GVVVFAP-GVYLSGALFLKSNMELRLDE 76
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+ QDL +P+++ + + AA L+ ++V ++G GT+DG G +
Sbjct: 77 GVEIRGVQDLAAYPLMQTRVAGIEMKWPAA-----LLNVYEQSNVRLSG-KGTVDGDGKI 130
Query: 239 WW--------QQFHKGKLKYT------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
WW +++ L++ RP L++ + + + SLTL W VH YS
Sbjct: 131 WWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHICYS 190
Query: 285 SNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
+ V G+TI P+TDGI+ DS ++ + C I DD + +K+G D G+
Sbjct: 191 ERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVN 250
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN-TESGVRIKTAVGRGGY 401
+PT+++ I + +A + +GSE SGGI+ + + + ++ +G+ K+A RGG
Sbjct: 251 LPTERVRITD-NVVRGGAAGVTIGSETSGGIRHIEVDHLTVMSAVPAGILFKSASTRGGT 309
Query: 402 VKDIYVRGM 410
++DI +R +
Sbjct: 310 IEDIAIRNV 318
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEGKR-IIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IICNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 175/385 (45%), Gaps = 55/385 (14%)
Query: 138 DAINQLSQY----SSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL--LASQD---- 187
DA + L Q S+ GG QL + AG ++T L S L+L A L +A Q
Sbjct: 49 DATSLLQQAIDRCSAKGGGQLRLAAGVFMTAPLALRSGVDLHLDAGAVLRGVAGQQHYRP 108
Query: 188 -LNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKG 246
WP R+ + G + + G+IDG G WW Q +
Sbjct: 109 AYMNWPY----------------RFGEALLGMDGVRHVRISGEGSIDGFGQQWWPQAQQA 152
Query: 247 KLK---------------YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
+L RP+L+E + +++I + ++N+P WN+ YS +I ++G
Sbjct: 153 RLTGEKQTLALGIPASNGLPRPWLIEIHRSADVRIEGVHIINAPMWNLVTRYSHDIDIRG 212
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
++I+ P SPNTDGI+ + + RI D I +GDDC+A+KSG +P + V
Sbjct: 213 VSILNPADSPNTDGIDVVASRHVRIRDSRISTGDDCIAIKSGLP----GSRLPAEATVDV 268
Query: 352 RLTCI-SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGM 410
R+ + +++GSE GI+ V D+ T++GVRIK+ RG + DI+ R +
Sbjct: 269 RIDHLWLGRGHGLSVGSETLFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHL 328
Query: 411 TMHTMKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGD 466
M + A + Y A +A+ P I ++ D+ A+ +A L G+
Sbjct: 329 RMKGVGTAISVLAYYPKPAPEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPES 388
Query: 467 PFTGICIANATI----GMAAKHKKV 487
P GI + + ++ G+ +H +V
Sbjct: 389 PLRGIRLGHLSLQAGSGLIVRHAQV 413
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 41/327 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG V G+ NTKA AI +Q GG ++ VPAG WLTG + S+ LYL +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+A L + + +++ LP+ + Y+ L++ +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 238 LW--W---QQFHKGKLK----------------------YTRPYLMEFMYTDNIQISSLT 270
W W Q H LK + RP+L+ F N+ +
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ SP W +H LV+ + + A N DGI+ + N +EDC GDD V +
Sbjct: 226 ICESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
K+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 391 -RIKTAVGRGGYVKDIYVRGMTMHTMK 416
+KT RGG+++++Y++ + T +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 166/339 (48%), Gaps = 23/339 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF V DG+T +T + A++Q++ + GG +L +PAG++ +G NL S F L+L
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+ASQ L ++ ++ L A + L++ ++ ++G G IDG G
Sbjct: 61 AGAVLIASQRLADYQAVQAL-------SCAEKSHNVLLYALGQRNITISG-TGRIDGDGE 112
Query: 238 LWW--QQFHKG-KL-KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
W+ ++ +G +L + RP ++ F + + +++ T++ +P W VH V ++ + +T
Sbjct: 113 AWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 172
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I +T PNTD ++ DSC + + Y+ + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM- 412
S YS +G+E ++DV ++ G+ I + GG ++ + +T
Sbjct: 231 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTFA 287
Query: 413 -HTMKWAFWMTGNYGSHADNHYDPKALP-VIQGINYRDI 449
H W + + DP P +++ + + ++
Sbjct: 288 CHHAPPCHWGKADPLHISVRRRDPAITPGIVEQVQFSNV 326
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 167/339 (49%), Gaps = 23/339 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF V DG+T +T + A++Q++ + GG +L +PAG++ +G NL S F L+L
Sbjct: 5 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 61
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+AS L ++ ++ L A + L++ ++I++G G IDG+G
Sbjct: 62 AGAVLIASPRLADYQAVQAL-------SCAEKSHNVLLYALGQRNIIISG-TGRIDGEGE 113
Query: 238 LWW--QQFHKG-KL-KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
W+ ++ +G +L + RP ++ F + + +++ T++ +P W VH V ++ + +T
Sbjct: 114 AWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 173
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I +T PNTD ++ DSC + + Y+ + DD + +K+ A P +Q++I
Sbjct: 174 IDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 231
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM- 412
S YS +G+E ++DV ++ G+ I + GG ++ + +T
Sbjct: 232 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTFA 288
Query: 413 -HTMKWAFWMTGNYGSHADNHYDPKALP-VIQGINYRDI 449
H W + + DP P +++ + + ++
Sbjct: 289 CHHAPPCHWGKADPLHISVRRRDPAITPGIVEQVQFSNL 327
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ D TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDYSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RGG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 167/378 (44%), Gaps = 53/378 (14%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+ VGDGKT NT + AI+ + +Y+P G +LTG+ L S LYL + A
Sbjct: 96 YHAVGDGKTLNTAVIQRAIDDCMDEEA-----VYLPKGVFLTGALRLHSDMELYLEEGAV 150
Query: 182 LLASQDLNEWPVIKPLPS-YGRGRDAAAGRYTSLI-FGT-------NLTDVIVTGDNGTI 232
L + + ++ LP + R Y+S++ G+ N +V++ G GTI
Sbjct: 151 LQGTDQVEDY-----LPRIWSRFEGIEQECYSSVLNLGSLEHQGDYNCRNVVIRG-KGTI 204
Query: 233 DGQGALWWQQFHKGKLKY------------------------TRPYLMEFMYTDNIQISS 268
G ++ + ++ RP L+ NI +S
Sbjct: 205 ASGGRSLAEKVIASETEHLKDYLLSLGEQIRECEKPETIPGRVRPRLINMSNCQNITMSG 264
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
L L + SWNVH +YS I+ T + N DG +PDS TN I C +GDD +
Sbjct: 265 LKLKDGASWNVHMIYSDGIVTNNCTFYSEGIW-NGDGWDPDSSTNCTIFGCTFNTGDDSI 323
Query: 329 AVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTES 388
A+KSG + G P++ IR C I +GSEMSGGI DV+ D ++
Sbjct: 324 AIKSGKNPEGNEISRPSEH--IRIFDCKCAMGRGITIGSEMSGGINDVQIWDCDISSSRH 381
Query: 389 GVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRD 448
G+ IK RGGYVK++ VR + A + + G + D PK PV + + +
Sbjct: 382 GIEIKGTKKRGGYVKNVKVR-----DSRTARILFHSVGYNDDGAGAPKP-PVFEKCIFEN 435
Query: 449 IVADNVSMAARLEGISGD 466
I +S++ + E I D
Sbjct: 436 IDVTGMSLSKQREWIPCD 453
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 166/339 (48%), Gaps = 23/339 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF V DG+T +T + A++Q++ + GG +L +PAG++ +G NL S F L+L
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+ASQ L ++ ++ L A + L++ ++ ++G G IDG G
Sbjct: 61 AGAVLIASQRLADYQAVQAL-------SCAEKSHNVLLYALGQRNITISG-TGRIDGDGE 112
Query: 238 LWW--QQFHKG-KL-KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
W+ ++ +G +L + RP ++ F + + +++ T++ +P W VH V ++ + +T
Sbjct: 113 AWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 172
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I +T PNTD ++ DSC + + Y+ + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM- 412
S YS +G+E ++DV ++ G+ I + GG ++ + +T
Sbjct: 231 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTFA 287
Query: 413 -HTMKWAFWMTGNYGSHADNHYDPKALP-VIQGINYRDI 449
H W + + DP P +++ + + ++
Sbjct: 288 CHHAPPCHWGKADPLHISVRRRDPAITPGIVEQVQFSNV 326
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 33/301 (10%)
Query: 145 QYSSDGGAQ----LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSY 200
Q + D GA+ +++P G +L G+ L L + A L D+ +P I +
Sbjct: 27 QKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDTRVAG 86
Query: 201 GRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ-------------QFHKGK 247
+ AA ++ + D+++ G G IDGQG WW+ ++ +
Sbjct: 87 VEMKWPAA-----ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKG 140
Query: 248 LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSP 301
L++ RP + +++ + L S WN+ YS+++LV+ + II P
Sbjct: 141 LRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGP 199
Query: 302 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSA 361
+TDGI+ DS TN R+ +C + GDDC+A+KSG D G + ++ + R S Y
Sbjct: 200 STDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYGV 259
Query: 362 TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAF-W 420
TI GSE+S G+ DV DI ++ G+R+K++ RG +++I V + M +++ F W
Sbjct: 260 TI--GSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGEVIENIRVENLNMIDVQFPFSW 317
Query: 421 M 421
+
Sbjct: 318 I 318
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 167/328 (50%), Gaps = 19/328 (5%)
Query: 96 SRKARRLDSFEYNAISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS ++ +I ++G G+G S T + IN+ + +GG
Sbjct: 68 TRLTIKLEAWESKLISIGKNNREYNIKEYGVKGNG-YSETATLQRIINEAAH---NGGGT 123
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 124 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 177
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLN 273
+ +D + G IDG+G + W++ G RP L+ F +IS L ++N
Sbjct: 178 AFLNFDHSDGVKVYGEGVIDGKG-VEWKKIPFGN--SGRPRLLCFTDCPGGKISGLKMIN 234
Query: 274 SPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 333
SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++KSG
Sbjct: 235 QASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSG 294
Query: 334 WDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-SGVR 391
DE G G P++ ++I C Y +A+GSE+SG I++V N S +R
Sbjct: 295 RDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWSPLR 352
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAF 419
K+ RGG V++I + + + F
Sbjct: 353 FKSQPSRGGTVENITFEDIIIKGARSIF 380
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 41/327 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG V G+ NTKA AI +Q GG ++ VPAG WLTG + S+ LYL +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+A L + + +++ LP+ + Y+ L++ +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 238 LW--W---QQFHKGKLK----------------------YTRPYLMEFMYTDNIQISSLT 270
W W Q H LK + RP+L+ F N+ +
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ SP W +H LV+ + + A N DGI+ + N +EDC GDD V +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
K+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 391 -RIKTAVGRGGYVKDIYVRGMTMHTMK 416
+KT RGG+++++Y++ + T +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 165/329 (50%), Gaps = 28/329 (8%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A + + DFG GDG T +T A + AI+ ++ G ++ P G +L+GS + S T
Sbjct: 24 AGTVKVNDFGAKGDGSTMDTAAIQKAIDAAAKSH---GTVVFAP-GTYLSGSIFVKSGVT 79
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L L K +L SQ + ++PV +P+ G + + +L+ D ++TG+ GTID
Sbjct: 80 LQLDKGVTILGSQRIEDYPV---MPTRVAGIEMSWP--AALVNVYEQKDAVITGE-GTID 133
Query: 234 GQGALWWQQFHKGKLKYT-------------RPYLMEFMYTDNIQISS-LTLLNSPSWNV 279
G G ++W + + Y RP L++ + +I+I L L S W +
Sbjct: 134 GDGKIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTL 193
Query: 280 HPVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
H YS+++ G+TI P+TDGI+ DS + + I DD + +K+G D
Sbjct: 194 HICYSTDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSD 253
Query: 338 GIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI-NTESGVRIKTAV 396
G+ PT+ +V+R T I +A + GSE SGG +++ A ++K + G+ K+A
Sbjct: 254 GLRVNRPTEDVVLRDST-IRDGAAGVTFGSETSGGFRNIEAYNLKVFGHVPVGILFKSAH 312
Query: 397 GRGGYVKDIYVRGMTMHTMKWAFWMTGNY 425
RGG+ +++ + +T+ + +T N+
Sbjct: 313 TRGGFAENVRIHDLTLTDIPVVLKVTMNW 341
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 169/394 (42%), Gaps = 44/394 (11%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP 196
D +N+ +++ S GG + +P GKW + L S+ L+L K A + S ++
Sbjct: 75 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY----- 129
Query: 197 LPS-----------------YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALW 239
LP+ Y G + A I+G ++ I NG + +
Sbjct: 130 LPAVFTRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEKDVP 189
Query: 240 W-----QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
W Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GI
Sbjct: 190 WDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGI 249
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
T+ + P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ ++I R
Sbjct: 250 TVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-R 307
Query: 353 LTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM 412
+ I GSE +G I+++ D T +G+R KT RGG + Y + M
Sbjct: 308 YSLAQHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 367
Query: 413 HTMKWAF--------WMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGIS 464
+ AF + G + + P ++ I +D + ++ GI
Sbjct: 368 INVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTANGIP 427
Query: 465 GDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PF + I N I K KK+ D G T
Sbjct: 428 EIPFNQVVIENGEI----KCKKLIGALNDAAGFT 457
>gi|304398511|ref|ZP_07380384.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304354016|gb|EFM18390.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 443
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 164/339 (48%), Gaps = 23/339 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF V DG+T +T + A++Q++ + GG +L +PAG++ +G NL S F L+L
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+AS L ++ ++ L A + L++ ++ ++G G IDG+G
Sbjct: 61 AGAVLIASPRLADYQAVQAL-------SCAEKSHNVLLYALGQRNITISG-TGRIDGEGE 112
Query: 238 LWW--QQFHKGKL--KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
W+ ++ +G + RP ++ F + + +++ T++ +P W VH V ++ + +T
Sbjct: 113 AWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 172
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I +T PNTD ++ D C + + Y+ + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM- 412
S YS +G+E ++DV ++ G+ I + GG ++ + +T
Sbjct: 231 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTFA 287
Query: 413 -HTMKWAFWMTGNYGSHADNHYDPKALP-VIQGINYRDI 449
H W + + H DP P V++ + + ++
Sbjct: 288 CHHAPPCHWGKADPLHISVRHRDPAITPGVVEQVQFSNM 326
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 41/327 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG V G+ NTKA AI +Q GG ++ VPAG WLTG + S+ LYL +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+A L + + +++ LP+ + Y+ L++ +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 238 LW--W---QQFHKGKLK----------------------YTRPYLMEFMYTDNIQISSLT 270
W W Q H LK + RP+L+ F N+ +
Sbjct: 166 TWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ SP W +H LV+ + + A N DGI+ + N +EDC GDD V +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
K+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 391 -RIKTAVGRGGYVKDIYVRGMTMHTMK 416
+KT RGG+++++Y++ + T +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 158/335 (47%), Gaps = 67/335 (20%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGK-WLTGSFNLISHFTLYL 176
S+T +G VGDG T++ A + AI+ + + GG ++ + G + + S L S+ L+L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAIDACN---AAGGGRVVLEGGHTYYSSSIELKSNVELHL 60
Query: 177 HKDAFLLASQDLNEW---------------------PVIKPLPSYGRGRDAAAGRYTSLI 215
+ A L A D++ + PV KP ++ +DA
Sbjct: 61 EQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDA--------- 111
Query: 216 FGTNLTDVIVTGDNGTIDGQGAL----------WWQQFHKGKLKYTRPYLMEFMYTDNIQ 265
DN +I GQGA+ + + G Y RP ++ + ++I
Sbjct: 112 ------------DNFSITGQGAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHIS 158
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+TL NSP W +HP +++L+ I ++ P+ N+DGI+PD TN RI C++ D
Sbjct: 159 FHDVTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCAD 218
Query: 326 DCVAVKS--GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKA 383
DC+ +K+ G +EYG PTK ++I T ++ SA I +G+E +++ ++
Sbjct: 219 DCICLKTTAGNNEYG-----PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCII 272
Query: 384 INTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
T G+ I+ + GG V+++ + + T ++A
Sbjct: 273 TGTNRGLSIQ--IRDGGCVRNVSFSNIMIETRRFA 305
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 9/219 (4%)
Query: 245 KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTD 304
+ + ++ RP L++F +I++ +TL NSP W H VYS +I+++G+ I+ P + NTD
Sbjct: 173 RPQTQFLRPPLLQFWKCRHIRLEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTD 232
Query: 305 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIA 364
++ DS + IE C GDD V +KSG G+ +PT+ + + ++ + IA
Sbjct: 233 AVDLDSSEDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCKILASHGG-IA 291
Query: 365 LGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGN 424
+GSE +GGI+DV D T+ +R+K+ GRGG +K+I + +TM T W + G
Sbjct: 292 IGSETAGGIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTM-TGCWCPIVIGQ 350
Query: 425 YGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
Y + P LP + + M R+E +
Sbjct: 351 Y-------FAPGVLPAERDTTLSETAQPVTPMTPRIENV 382
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 153 QLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT 212
+L VPAG + TG L S L L A + D + +P P+ + G + A R
Sbjct: 30 ELIVPAGVYETGPVTLYSDLILTLEAGAIIRFRADPHCYP---PIWTRWEGIECYAMR-- 84
Query: 213 SLIFGTNLTDVIVTGDNGTIDGQGALWWQQFHK 245
L++ + +++ + G+ G IDG G WW F +
Sbjct: 85 PLMYASEASNITLRGE-GVIDGAGQWWWDTFRQ 116
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 169/389 (43%), Gaps = 34/389 (8%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW----- 191
D +N+ +++ S GG + +P GKW + L S+ L+L K A + S ++
Sbjct: 43 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDYLPAVF 102
Query: 192 ------PVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G ++ I NG + + W
Sbjct: 103 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 162
Query: 241 -QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 163 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 221
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ ++I R +
Sbjct: 222 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 280
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
I GSE +G I+++ D T +G+R KT RGG + Y + M +
Sbjct: 281 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 340
Query: 418 AF--------WMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
AF + G + + P ++ I +D + ++ GI PF
Sbjct: 341 AFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTANGIPEIPFN 400
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMT 498
+ I N I K KK+ D G T
Sbjct: 401 QVVIENGEI----KCKKLIGALNDAAGFT 425
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 155/347 (44%), Gaps = 32/347 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI DFG GDGKT NT A + AI + + GG + VP G ++TG+ L S L+L
Sbjct: 58 SILDFGARGDGKTDNTAAIRKAIETAN---ARGGGHVVVPRGTFVTGAVYLKSDVDLHLA 114
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L D +++P + R + +I+ +++ VTG GT+D G
Sbjct: 115 AGAVLAFDSDASKFPNV-----LTRYEGIECVNRSPMIYAYKESNIAVTG-QGTLDAAGT 168
Query: 238 LWW--------------------QQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSW 277
W ++ G R +E D + I +TL N W
Sbjct: 169 ASWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRSTFVEPYSCDTVLIQGITLKNPMFW 228
Query: 278 NVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
+HP N+ + G+ A NTD +P+SC + I + ++ + DD +A+KSG D
Sbjct: 229 QLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLGAHDDNIALKSGRDAD 288
Query: 338 GIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI-NTESGVRIKTAV 396
G G+P + +V+ + A I GSE +GGI+DV A + T+ G+ +K+
Sbjct: 289 GRRVGVPCRNIVVANCVMDGNWGA-ITCGSEQTGGIRDVYAYKLTVTGETKYGLYVKSNT 347
Query: 397 GRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQG 443
RGG+ +++ + ++ + ++ +Y Y P+ P G
Sbjct: 348 LRGGFTENVNLDSVSGTFGRSVVYVLPDYNGQT-GEYVPRFGPFTLG 393
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 61/280 (21%)
Query: 111 SCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLIS 170
S A++ SI +GGV G NT+AF+ AI+ LS+ GG +L VP G WLTG L S
Sbjct: 42 SFAANTVSIIQYGGVAGGSVKNTEAFRKAIDDLSK---KGGGKLVVPRGMWLTGPIELKS 98
Query: 171 HFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNG 230
+ L++ + AF++ S+D N++P++ S+ G + R S + N T++ +TG G
Sbjct: 99 NINLHVEEGAFIIFSKDKNDYPLVD--VSF-EGLNTI--RCQSPVSARNATNIAITG-KG 152
Query: 231 TIDGQGALW------------WQQ--------------------FHKG------------ 246
IDG G W W++ + KG
Sbjct: 153 VIDGSGDAWRAIKKGKVSESEWKEITASGGILSSDGKTWYPSESYKKGFESSSSFNVPDR 212
Query: 247 ----KLK----YTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
+LK + RP ++ + D + + T NSP+WN+HP+ SN++++ +T+ P
Sbjct: 213 ISKEELKSVKDFLRPVMVSLVGCDKVLLDGPTFQNSPAWNLHPLMCSNVILKNLTVRNPW 272
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
S N DG++ +SC N I + GDD + +KSG +E G
Sbjct: 273 FSQNGDGVDLESCKNVLIYNNTFDVGDDAICIKSGKNEDG 312
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 161/335 (48%), Gaps = 52/335 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITD+ DGK S + AINQ +++ S GG ++ +P G + T L S+ L+L
Sbjct: 52 ITDYY---DGKDS---LYTKAINQAITECSVQGGGKVIIPKGIYPTAPIRLKSNVNLHLA 105
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
A L + D N + ++ R + LI+ ++ +TG NG +DGQ
Sbjct: 106 DSAVLKFTTDYNLFDTVRT-----RLEGIDCYNISPLIYAYEEVNIAITG-NGIMDGQAD 159
Query: 237 -ALWW-------------QQFHKGKLKY-------------------TRPYLMEFMYTDN 263
+ W+ + ++ L Y RP + N
Sbjct: 160 RSNWFCDERIRGVVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSIRPQFINLYKCKN 219
Query: 264 IQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVS 323
I + T+ +P W +HP+ S N+ ++ + + + N DG +P+SC N IEDC +
Sbjct: 220 ILLEGFTINRAPFWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPESCNNVLIEDCDFDT 277
Query: 324 GDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKA 383
GDDC+A+KSG DE G + +P++ +++R + A +A+GSE++GG ++V E+ +
Sbjct: 278 GDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTGGCRNVWVENCRM 336
Query: 384 INTESG--VRIKTAVGRGGYVKDIYVRGMTMHTMK 416
+ E +RIK+ RGG V++++VR + + K
Sbjct: 337 DSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECK 371
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 162/337 (48%), Gaps = 49/337 (14%)
Query: 113 RAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHF 172
RA ITDFG D + + T A AI+ + G + VP G W TG NL SH
Sbjct: 51 RAQRFPITDFGASTDDQAATTAAIAKAIDAAHRA---GSGNVIVPQGIWPTGKINLKSHV 107
Query: 173 TLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
L+L K A LL S+ ++ + P+ + G + Y+ L++ + +V ++G+ G +
Sbjct: 108 NLHLSKGATLLFSEKPEDY--LPPVQTSWEGIECF--NYSPLVYAFDCENVGLSGE-GKL 162
Query: 233 DGQGALW--WQQFHKGKL-------------------------KYTRPYLMEFMYTDNIQ 265
+ +W W + K + + RP+ ++F ++
Sbjct: 163 KAKLDVWQVWYKRPKPHMDALVRLYDLAYKGVPVEARQMVEGENHLRPHFVQFNRCRHVL 222
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
I +++ +SP W +HP+ +++++ + + A N DG++P+ N IEDC GD
Sbjct: 223 IEDISIEDSPFWTIHPLLCRDVVIRRVKVRA--HGHNNDGVDPEMSQNVLIEDCVFDQGD 280
Query: 326 DCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDV--------- 376
D V+VKSG D PTK +V+R I +A+GSE+SGGI+++
Sbjct: 281 DAVSVKSGRDMDAWRLNTPTKNVVMRNCR-IKNGHQLMAVGSELSGGIENIFVDNCHFVG 339
Query: 377 --RAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
+ +D A+ + + +KT RGGYVK+I++R ++
Sbjct: 340 DGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNVS 376
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 39/368 (10%)
Query: 143 LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS-YG 201
+ Q SS GG + +PAGKWL+G L S L++ + A ++ ++ LP+ +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWLSGRIELKSFVELHIARGAEIVFGGCAEDY-----LPAVFT 103
Query: 202 RGRDAAAGRYTSLIFGTNLTDVIVTGD----------------NGTIDGQGALWW----- 240
R + I+ N ++ +TG+ NG + + W
Sbjct: 104 RHEGVEIMGPGAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVE 163
Query: 241 QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPV 298
Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 164 QRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-T 222
Query: 299 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISP 358
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G T+ +VIR
Sbjct: 223 EVPSGDGIDIESCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHG 282
Query: 359 YSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD-IYVRGMTMHTMKW 417
+ I +GSE +G I+++ D T +G+R KT RGG IY R ++ K
Sbjct: 283 HGG-ITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKA 341
Query: 418 AFW-MTGN--YGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFTG 470
W + GN Y Y +A+ P I +D + ++ GI PF+
Sbjct: 342 FTWDLLGNAYYMGELAARYPERAVDHLTPNISNTVIKDFIVESSKQFFTANGIPEIPFSN 401
Query: 471 ICIANATI 478
I N TI
Sbjct: 402 TLIENGTI 409
>gi|47606004|sp|Q7M1E7.1|PGLR2_CHAOB RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Cha o 2; AltName: Full=Pectinase;
AltName: Allergen=Cha o 2; Flags: Precursor
Length = 514
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 187/427 (43%), Gaps = 60/427 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLI----SHFT 173
++ +G VGDGK +T+AF N + +S A L VPA K + NL+
Sbjct: 60 NVEQYGAVGDGKHDSTEAFATTWNAACKKAS---AVLLVPANKKFFVN-NLVFRGPCQPH 115
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L D ++A D W K + + LTD + G G ID
Sbjct: 116 LSFKVDGTIVAQPDPARWKNSKIWLQFAQ-----------------LTDFNLMG-TGVID 157
Query: 234 GQGALWWQQFHKGKLKYT----------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVY 283
GQG WW G+ K RP ++ Y+ ++ + LTL+NSP +++
Sbjct: 158 GQGQQWW----AGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGE 213
Query: 284 SSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGM 343
+ +QG+ I AP SPNTDGI+ + IE C I +GDDC+A+ +G
Sbjct: 214 CEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG---------- 263
Query: 344 PTKQLVIRRLTCISPYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
+ + I+ L C + +I +LG + S + V K I+T++G+RIKT G G
Sbjct: 264 -SSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGL 322
Query: 402 VKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAA-RL 460
I + M + + Y + A + ++ IQG+ Y++I + + AA +L
Sbjct: 323 ASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQL 382
Query: 461 EGISGDPFTGICIANATIGMAAKHKKVPWTCADIG--GMTSGVTPPPCE-LLPDQGPEKI 517
P TGI ++N ++ + + P +C D G SG P C+ L P P++
Sbjct: 383 MCSDSVPCTGIQLSNVSLKLTSGK---PASCVDKNARGFYSGRLIPTCKNLRPGPSPKEF 439
Query: 518 RACDFPT 524
PT
Sbjct: 440 ELQQQPT 446
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 162/317 (51%), Gaps = 25/317 (7%)
Query: 96 SRKARRLDSFEYNAISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS ++ +I ++G G+G S T + IN+ + +GG
Sbjct: 685 TRLTIKLEAWESKLISIGKNNREYNIKEYGVKGNG-YSETATLQRIINEAAH---NGGGT 740
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 741 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 794
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT---RPYLMEFMYTDNIQISSLT 270
+ +D + G IDG+G W K+ + RP L+ F +IS L
Sbjct: 795 AFLNFDHSDGVKVYGEGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLK 848
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
++N SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++
Sbjct: 849 MINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISI 908
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-S 388
KSG DE G G P++ ++I C Y +A+GSE+SG I++V N S
Sbjct: 909 KSGRDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWS 966
Query: 389 GVRIKTAVGRGGYVKDI 405
+R K+ RGG V++I
Sbjct: 967 PLRFKSQPSRGGTVENI 983
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 162/317 (51%), Gaps = 25/317 (7%)
Query: 96 SRKARRLDSFEYNAISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS ++ +I ++G G+G S T + IN+ + +GG
Sbjct: 685 TRLTIKLEAWESKLISIGKNNREYNIKEYGVKGNG-YSETATLQRIINEAAH---NGGGT 740
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 741 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 794
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT---RPYLMEFMYTDNIQISSLT 270
+ +D + G IDG+G W K+ + RP L+ F +IS L
Sbjct: 795 AFLNFDHSDGVKVYGEGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLK 848
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
++N SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++
Sbjct: 849 MINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISI 908
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-S 388
KSG DE G G P++ ++I C Y +A+GSE+SG I++V N S
Sbjct: 909 KSGRDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWS 966
Query: 389 GVRIKTAVGRGGYVKDI 405
+R K+ RGG V++I
Sbjct: 967 PLRFKSQPSRGGTVENI 983
>gi|217073342|gb|ACJ85030.1| unknown [Medicago truncatula]
Length = 137
Score = 124 bits (310), Expect = 2e-25, Method: Composition-based stats.
Identities = 57/94 (60%), Positives = 71/94 (75%)
Query: 106 EYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGS 165
E N R HS SIT+FG VGDG T NTKAF++AI L+ +S GGA+L+VPAG+WLTGS
Sbjct: 32 ETNLDKVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGS 91
Query: 166 FNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPS 199
F+LISH TL+L KDA +L S + +WPV+ PLPS
Sbjct: 92 FDLISHLTLWLDKDAIILGSTNSEDWPVVDPLPS 125
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 158/335 (47%), Gaps = 67/335 (20%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGK-WLTGSFNLISHFTLYL 176
S+T +G VGDG T++ A + AI+ + + GG ++ + G + + S L S+ L+L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAIDACN---AAGGGRVVLEGGHTYYSSSIELKSNVELHL 60
Query: 177 HKDAFLLASQDLNEW---------------------PVIKPLPSYGRGRDAAAGRYTSLI 215
+ A L A D++ + PV KP ++ +DA
Sbjct: 61 EQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDA--------- 111
Query: 216 FGTNLTDVIVTGDNGTIDGQGAL----------WWQQFHKGKLKYTRPYLMEFMYTDNIQ 265
DN +I GQGA+ + + G Y RP ++ + ++I
Sbjct: 112 ------------DNFSITGQGAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHIS 158
Query: 266 ISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 325
+TL NSP W +HP +++L+ I ++ P+ N+DGI+PD TN RI C++ D
Sbjct: 159 FHDVTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCAD 218
Query: 326 DCVAVKS--GWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKA 383
DC+ +K+ G +EYG PTK ++I T ++ SA I +G+E +++ ++
Sbjct: 219 DCICLKTTAGNNEYG-----PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCII 272
Query: 384 INTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWA 418
+ G+ I+ + GG V+++ + + T ++A
Sbjct: 273 TGSNRGLSIQ--IRDGGCVRNVSFSNIMIETRRFA 305
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 185/378 (48%), Gaps = 45/378 (11%)
Query: 121 DFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDA 180
DFG +NTKA + AI+ + +S GG + P G +L+GS L + L+L K+
Sbjct: 58 DFGAQSKVGFTNTKAIQTAIDSCA--ASGGGIVKFRP-GTYLSGSIFLKDNVQLHLDKEV 114
Query: 181 FLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW 240
LL SQ++ ++ I + AA L+ + +V+++G+ GTIDGQG ++W
Sbjct: 115 TLLGSQNILDYKEIATRVAGIEMEWPAA-----LVNAIDTQNVLISGE-GTIDGQGKVFW 168
Query: 241 QQFHKGK--------LKY------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSN 286
+ + L++ RP + + N+ + LTL + W V +YS +
Sbjct: 169 DMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLIQNSKNVIVRDLTLQRAGFWTVQILYSKH 228
Query: 287 ILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
+ G+TI + P+TDGI+ DS + +++C I DD +K+G D G+ P
Sbjct: 229 VTTDGLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNFCLKAGRDWDGLRVNRP 288
Query: 345 TKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVK 403
T+ +VI+ C + A + +GSE SGGI+ + A +I+ T++G+++K+A RGG ++
Sbjct: 289 TEYVVIK--DCKTGKGAGLLTVGSETSGGIRHIYANNIQGKGTDAGLKLKSATTRGGVIE 346
Query: 404 DIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPK----------------ALPVIQGI-NY 446
DI M M ++ ++ N+ PK +P QGI +
Sbjct: 347 DIIFDNMKMDSVGTFLSISMNWNPTYSYSKLPKEYNIDEVPEHWKTMLNTVPEQQGIPQF 406
Query: 447 RDIVADNVSMAARLEGIS 464
++IV +NV + + IS
Sbjct: 407 KNIVLNNVLVKHANKAIS 424
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 178/396 (44%), Gaps = 47/396 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI D+G V GK NT+A AI+ ++ GG ++ +PAG+WLTGS + S+ L+L
Sbjct: 55 SIVDYGAVEGGKQKNTEAIAKAIDACNKA---GGGRVVIPAGEWLTGSIHFKSNVNLHLA 111
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAG-RYTSLIFGTNLTDVIVTGDNGTIDGQG 236
++A + + D ++ LP+ + Y+ L++ ++ +TG G +
Sbjct: 112 ENAIVRFTDDPADY-----LPAVMTSWEGMECYNYSPLLYAFECENIAITG-KGLLKPHM 165
Query: 237 ALWWQQF-----HKGKLK--YT--------------------RPYLMEFMYTDNIQISSL 269
LW F H LK YT RP+L++F N+ +
Sbjct: 166 GLWKVWFKRPPAHMEALKELYTMASTDVPVEQRQMAKGENNLRPHLIQFNRCKNVLLDGF 225
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
+ SP W +H + + + + A N DGI+ + N IEDC GDD V
Sbjct: 226 HIEESPFWTIHMYLVDGGIARNLNVKA--MGHNNDGIDLEMTRNFLIEDCVFEQGDDAVV 283
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAI-NTES 388
+KSG ++ PT+ +V+R ++ + +GSE+SGG++++ D +A N
Sbjct: 284 IKSGRNQDAWRLNTPTENIVVRNCLVLAG-QTLLGVGSEISGGVRNIYMHDCEAPNNVHR 342
Query: 389 GVRIKTAVGRGGYVKDIYVR----GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGI 444
IKT RG +V+++Y+ G T+ M+ + + + + + + I+ I
Sbjct: 343 LFFIKTNHRRGAFVENVYMEKIKTGATLRVMEIDMNVLYQWRTLVPTY--EERITRIENI 400
Query: 445 NYRDIVADNVSMAARLEGISGDPFTGICIANATIGM 480
+ DI + M L+G P I + N +G+
Sbjct: 401 HMIDIDCKSAKMIYDLKGDHKLPVKDIELRNIHVGV 436
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 48/409 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++TD+G GD + NT A + AI+ Q + GG ++ P G +LTGS + ++ L++
Sbjct: 48 NVTDYGAKGDALSMNTMAIQKAIDAAEQ--AGGGIVVFHP-GIYLTGSLFVGNNVNLHIS 104
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K L+ SQD+ ++ I R ++LI + ++GD G I+G+G
Sbjct: 105 KGVTLIGSQDIGDYKKIDT-----RVAGIEMEWPSALINIIGKKNAAISGD-GVINGRGK 158
Query: 238 LWWQQFHKGKLKYT-------------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
++W ++ + Y RP + +N+ + + L W++H +YS
Sbjct: 159 VFWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECENVTVRDIVLYQPGFWSLHILYS 218
Query: 285 SNILVQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
+I + GI I + P+TDGI+ DS +++ I DD +K+G D G+
Sbjct: 219 KHITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDDNFCLKAGRDSDGLRVN 278
Query: 343 MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYV 402
P + +VIR S GSE SGGI+++ A +K + T+ G+R K+ RGG +
Sbjct: 279 RPCQYVVIRDCVAGSG-GGMFTCGSETSGGIRNIVAYRMKGVGTKCGLRFKSTCQRGGVI 337
Query: 403 KDIYVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKALPV-----IQGIN------- 445
+DIY+ + M ++ F + N+ S YD + +PV ++ ++
Sbjct: 338 EDIYLYDIEMIGVERPFVVDLNWNPAYSISKLPKGYDMEKIPVYWSKMLESVSLEQGTPV 397
Query: 446 YRDIVADNVSMA-AR----LEGISGDPFTGICIANATIGMAAKHKKVPW 489
+R++ DNV+ + AR + GI+ + N I K K+ W
Sbjct: 398 FRNVTLDNVTASNARTCMNVVGIANSKIENFILRNVCI-EGNKAGKIIW 445
>gi|299144965|ref|ZP_07038033.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|336412843|ref|ZP_08593196.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
gi|298515456|gb|EFI39337.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|335942889|gb|EGN04731.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
Length = 527
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 43/363 (11%)
Query: 150 GGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP--VIKPLPS-------- 199
GG + +P GKW +G L S+ L+L +A + E+P V LP+
Sbjct: 87 GGGTVVIPKGKWKSGRIVLKSNVNLHLEDEAEI-------EFPGTVESYLPAVFTRHEGI 139
Query: 200 ---------YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL-----WWQQFHK 245
Y G + A +I+G + I NG + + Q+
Sbjct: 140 EIMGAGAFIYANGENNIAVTGKGIIYGPAMNAEIRQLPNGNTVVENDISSTTPVAQRIFD 199
Query: 246 GK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNT 303
G + RP + + N+ + +T+ S WN+ P+Y N++++GIT+ + + P+
Sbjct: 200 GMNGRGFYRPKTISPINCTNVLVEGITMERSAFWNICPIYCENVIIRGITVNS-IGVPSG 258
Query: 304 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATI 363
DGI+ +SC N IE + GDDC +K+G E G+ G T+ +VIR + I
Sbjct: 259 DGIDIESCKNVLIEYSTLNCGDDCFTLKAGRAEDGLRVGKATENVVIRYSLAKDGHGG-I 317
Query: 364 ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM----HTMKWAF 419
GSE +GGI+++ D T+ G+R KT R G V DI + M KW
Sbjct: 318 TCGSETAGGIENIYLHDCVFDGTQVGIRFKTRRNRAGGVSDILYENIRMTNVGEAFKWDL 377
Query: 420 WMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFTGICIAN 475
+ Y + P+A+ PVI+ I R+ + ++ + GI P + I I N
Sbjct: 378 LGSKRYMGELASRIPPRAVNRLTPVIKDIKIRNFIVESAHKVLSINGIPEVPCSNILIEN 437
Query: 476 ATI 478
I
Sbjct: 438 GKI 440
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
Length = 1095
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 162/317 (51%), Gaps = 25/317 (7%)
Query: 96 SRKARRLDSFEYNAISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS ++ +I ++G G+G S T + IN+ + +GG
Sbjct: 685 TRLTIQLEAWESKLISIGKNNREYNIKEYGVKGNG-YSETATLQRIINEAAH---NGGGT 740
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 741 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 794
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT---RPYLMEFMYTDNIQISSLT 270
+ +D + G IDG+G W K+ + RP L+ F +IS L
Sbjct: 795 AFLNFDHSDGVKVYGEGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLK 848
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
++N SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++
Sbjct: 849 MINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISI 908
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-S 388
KSG DE G G P++ ++I C Y +A+GSE+SG I++V N S
Sbjct: 909 KSGRDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWS 966
Query: 389 GVRIKTAVGRGGYVKDI 405
+R K+ RGG V++I
Sbjct: 967 PLRFKSQPSRGGTVENI 983
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
Length = 1095
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 162/317 (51%), Gaps = 25/317 (7%)
Query: 96 SRKARRLDSFEYNAISCRAHSA--SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQ 153
+R +L+++E IS ++ +I ++G G+G S T + IN+ + +GG
Sbjct: 685 TRLTIQLEAWESKLISIGKNNREYNIKEYGVKGNG-YSETATLQRIINEAAH---NGGGT 740
Query: 154 LYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS 213
+ +PAG++L+G+ L + K+A L+++ D NE+PVI P+ G + R+
Sbjct: 741 IVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRC 794
Query: 214 LIFGTNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYT---RPYLMEFMYTDNIQISSLT 270
+ +D + G IDG+G W K+ + RP L+ F +IS L
Sbjct: 795 AFLNFDHSDGVKVYGEGVIDGKGVEW------KKIPFGNSGRPRLVCFTDCPGGKISGLK 848
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
++N SW +H +Y++ + GI I A P++DGI+ DS + I I + DDC+++
Sbjct: 849 MINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISI 908
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYS-ATIALGSEMSGGIQDVRAEDIKAINTE-S 388
KSG DE G G P++ ++I C Y +A+GSE+SG I++V N S
Sbjct: 909 KSGRDEDGRRVGRPSENILIE--NCHFAYGHGGVAMGSEISGDIRNVTIRSCLMDNENWS 966
Query: 389 GVRIKTAVGRGGYVKDI 405
+R K+ RGG V++I
Sbjct: 967 PLRFKSQPSRGGTVENI 983
>gi|170697849|ref|ZP_02888934.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
gi|170137236|gb|EDT05479.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
Length = 664
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + N+P W HP S N++++G+T + PN DG
Sbjct: 328 GLGHYLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTNS--IGPNNDG 385
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ E C +GDDC+A+KSG D EYG P K+ +IR T S +
Sbjct: 386 FDPDACTDVLCEGCTFNTGDDCIAIKSGKDRDTEYG-----PAKRHLIRNCTMNSGHGG- 439
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+T+
Sbjct: 440 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 496
>gi|387904260|ref|YP_006334598.1| Polygalacturonase [Burkholderia sp. KJ006]
gi|387579152|gb|AFJ87867.1| Polygalacturonase [Burkholderia sp. KJ006]
Length = 664
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + + N+P W HP S N++++G+T + PN DG
Sbjct: 328 GLGHYLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDG 385
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ E C +GDDCVA+KSG D EYG P K+ +IR T S +
Sbjct: 386 FDPDACTDVLCERCTFNTGDDCVAIKSGKDRDTEYG-----PAKRHLIRDCTMNSGHGG- 439
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+ +
Sbjct: 440 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVL 496
>gi|372223082|ref|ZP_09501503.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 453
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 46/348 (13%)
Query: 115 HSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKW-LTGSFNLISHFT 173
+S + FG + + + KA A+N L + + G +L + G + + G +L SH
Sbjct: 45 NSVELHQFGALPNDAKDDRKAIIKALNYLKKRN---GGKLIIGKGIYEINGPIHLPSHVN 101
Query: 174 LYLHKDAFL-LASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTI 232
++L + A L A + PV+ + Y+ LI+ N T++ +TG G I
Sbjct: 102 VHLQEGAVLRFAPKPELYLPVV-----FTSWEGTFLYNYSPLIYAKNETNIAITGA-GVI 155
Query: 233 DGQGALWWQQF---------------HK---------GKLKYTRPYLMEFMYTDNIQISS 268
DG+G+ W F H+ GK RP+L++F+ NI I
Sbjct: 156 DGEGSKVWSTFKAEEQADKLLSRKMNHEEQPIASRQFGKDSKLRPHLLQFIDCKNILIEG 215
Query: 269 LTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 328
+ +SP W H + SS I ++GI+ A + N DGI+ + N IE+ + DD +
Sbjct: 216 VHFEDSPFWTTHFLRSSEITIRGISFNA--HNKNNDGIDLEYVNNVLIENVDFNNSDDNI 273
Query: 329 AVKSGWDEYGIAYG-MPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAIN-T 386
A+K+G D G A P++ +VIR ++ + +GSEMS G+++V D A
Sbjct: 274 AIKAGRDTEGRANSETPSQNIVIRNNRFKGLHA--LVIGSEMSAGVKNVFVVDNMASGYL 331
Query: 387 ESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNY-----GSHA 429
+ GV KT RGGY+K IY+ + + + +MT NY G+HA
Sbjct: 332 KRGVYFKTNSDRGGYIKSIYIDQLELQKTEDCIYMTANYHGEGSGAHA 379
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 172/395 (43%), Gaps = 46/395 (11%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP 196
D +N+ +++ S GG + +P GKW + L S+ L+L K A L S ++
Sbjct: 140 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAELEFSGCAEDY----- 194
Query: 197 LPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG-----------------QGAL 238
LP+ + R + I+ ++ +TG+ GTI G + +
Sbjct: 195 LPAVFTRHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDV 253
Query: 239 WW-----QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
W Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++G
Sbjct: 254 PWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRG 313
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
IT+ + P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ +VI
Sbjct: 314 ITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI- 371
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R + I GSE +G I+++ D T +G+R KT RGG + Y +
Sbjct: 372 RYSLAQHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLR 431
Query: 412 MHTMKWAF--------WMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
M + AF + G + + P ++ I +D + ++ GI
Sbjct: 432 MINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGI 491
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PF + + N I K +K+ D G T
Sbjct: 492 PEIPFNQVVVENGEI----KCRKLIGALNDAAGFT 522
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 34/389 (8%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW----- 191
D +N+ +++ S GG + +P GKW + L S+ L+L K A + S ++
Sbjct: 465 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDYLPAVF 524
Query: 192 ------PVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G ++ I NG + + W
Sbjct: 525 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 241 -QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 585 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 643
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ +VI R +
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 702
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM----H 413
I GSE +G I+++ D T +G+R KT RGG + Y + M
Sbjct: 703 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 762
Query: 414 TMKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFT 469
W + Y Y + + P ++ I +D + ++ GI PF
Sbjct: 763 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMT 498
+ I N I K KK+ D G T
Sbjct: 823 QVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 169/389 (43%), Gaps = 34/389 (8%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL-LASQDLNEWP--- 192
D +N+ +++ S GG + +P GKW + L S+ L+L K A + A + + P
Sbjct: 140 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDYLPAVF 199
Query: 193 -------VIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G + I NG + + W
Sbjct: 200 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 259
Query: 241 -QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 260 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 318
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ +VI R +
Sbjct: 319 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 377
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
I GSE +G I+++ D T +G+R KT RGG + Y + M +
Sbjct: 378 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 437
Query: 418 AF--------WMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
AF + G + + P ++ I +D + ++ GI PF
Sbjct: 438 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMT 498
+ + N I K KK+ D G T
Sbjct: 498 QVVVENGEI----KCKKLIGALNDAAGFT 522
>gi|336427665|ref|ZP_08607662.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009040|gb|EGN39040.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 438
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 151/313 (48%), Gaps = 31/313 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I D+G + DGKT+N K + AI ++ G ++ VPAG +L+G+ L S+ LYL
Sbjct: 4 NIMDYGALPDGKTNNQKQIQAAIEDCAKT----GGRVLVPAGNFLSGTIQLKSNVELYLE 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAG-RYTSLIFGTNLTDVIVTGDNGTIDGQG 236
K + L AS + + + RDA G ++ + ++ + G+ GTIDGQG
Sbjct: 60 KGSVLTASNSPED------IIDFSEDRDAMDGIENGCFLYACHARNITIAGE-GTIDGQG 112
Query: 237 ALWW------QQFHKGKLKYT--RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
+ + FH+ L R D +Q+ +T ++ W +H N++
Sbjct: 113 RKVYLDDNADEGFHECPLAVAGFRARTTYLEDVDGLQVRGITFYDACFWTLHMAGCQNVI 172
Query: 289 VQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG---WDEYGIAYGMPT 345
V GI I PN DGI+PD C N I +C I SGDD + +K+ W++YG
Sbjct: 173 VDGIRIFNNDRGPNNDGIDPDGCRNVIIRNCIIESGDDSIVLKATRPVWEKYG-----NC 227
Query: 346 KQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+ +VI S SA + +G+E G I++V D + V I V GG ++DI
Sbjct: 228 ENIVITNCILHSRDSA-LKIGTETWGDIRNVIFGDCVVRDCSRAVGI--WVRDGGTIEDI 284
Query: 406 YVRGMTMHTMKWA 418
+ +T +T ++A
Sbjct: 285 QIHHITGNTKRYA 297
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 177/401 (44%), Gaps = 47/401 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITD+G GK +NTKA AI + GG ++ VPAG WLTG + S+ LYL +
Sbjct: 54 ITDYGAKNGGKVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+A L + + +++ LP+ + Y+ L++ +V +TG GT+ +
Sbjct: 111 NAILNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 238 LW--W---QQFHKGKLK----------------------YTRPYLMEFMYTDNIQISSLT 270
W W Q H LK + RP+L+ F N+ +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ SP W +H LV+ + + A N DGI+ + N +EDC GDD V +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
K+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 391 -RIKTAVGRGGYVKDIYVR----GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGIN 445
+KT RGG+++++Y++ GM ++ + + + + + I GI
Sbjct: 342 FFVKTNHRRGGFIENVYMKNVQAGMAQRVLEIDTEVLYQWKDLVPTY--EERITRIDGIY 399
Query: 446 YRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKK 486
+ ++ L+G + P + I N +G K K
Sbjct: 400 MDKVTCESADAIYELKGDAKLPVKNVTIKNVKVGEVKKFVK 440
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 150/309 (48%), Gaps = 32/309 (10%)
Query: 140 INQLSQYSSDGGAQL----YVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
I QL Q D + + P G + G+ L S+ L + +D L SQ+L ++P +
Sbjct: 4 ITQLLQREIDQASTVQGTVITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYPEVD 63
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF------------ 243
+ + AA +I + +V+++G G +DG+G WWQ F
Sbjct: 64 NRVAGINMKWPAA-----MINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGMMAD 117
Query: 244 -HKGKLKYT------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
K L++ RP + + + I ++ + S WN YS +IL+ GITI
Sbjct: 118 YAKKGLRWAADYDCKRPRNILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITI-D 176
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P+TDGI+ DSC I++ YI DD +++K+G +A +++ I+ C
Sbjct: 177 NGKGPSTDGIDIDSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIK--DCQ 234
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
Y + IA+GSE SGGI++++ + + T +G RIK+A RGG+++ + +TM +
Sbjct: 235 LGYGSGIAIGSETSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVG 294
Query: 417 WAFWMTGNY 425
+ F + N+
Sbjct: 295 FPFLLQTNW 303
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 172/395 (43%), Gaps = 46/395 (11%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIKP 196
D +N+ +++ S GG + +P GKW + L S+ L+L K A + S ++
Sbjct: 140 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGCAEDY----- 194
Query: 197 LPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG-----------------QGAL 238
LP+ + R + I+ ++ +TG+ GTI G + +
Sbjct: 195 LPAVFTRHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDV 253
Query: 239 WW-----QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQG 291
W Q+ + G + RP + + NI I +T+ S WNV P+Y N++++G
Sbjct: 254 PWDMPIEQRIYDGMEGRTFYRPKTISPINCTNILIEGITMERSTLWNVVPIYCENVIIRG 313
Query: 292 ITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 351
IT+ + P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ +VI
Sbjct: 314 ITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI- 371
Query: 352 RLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
R + I GSE +G I+++ D T +G+R KT RGG + Y +
Sbjct: 372 RYSLAQHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLR 431
Query: 412 MHTMKWAF--------WMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGI 463
M + AF + G + + P ++ I +D + ++ GI
Sbjct: 432 MINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGI 491
Query: 464 SGDPFTGICIANATIGMAAKHKKVPWTCADIGGMT 498
PF + + N I K +K+ D G T
Sbjct: 492 PEIPFNQVVVENGEI----KCRKLIGALNDAAGFT 522
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 168/389 (43%), Gaps = 34/389 (8%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW----- 191
D +N+ +++ S GG + +P GKW + L S+ L+L K A + S ++
Sbjct: 465 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDYLPAVF 524
Query: 192 ------PVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G ++ I NG + + W
Sbjct: 525 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 241 -QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 585 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 643
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ ++I R +
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 702
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM----H 413
I GSE +G I+++ D T +G+R KT RGG + Y + M
Sbjct: 703 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 762
Query: 414 TMKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFT 469
W + Y Y + + P ++ I +D + ++ GI PF
Sbjct: 763 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMT 498
+ I N I K KK+ D G T
Sbjct: 823 QVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|134292563|ref|YP_001116299.1| glycoside hydrolase family protein [Burkholderia vietnamiensis G4]
gi|134135720|gb|ABO56834.1| glycoside hydrolase, family 28 [Burkholderia vietnamiensis G4]
Length = 664
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + + N+P W HP S N++++G+T + PN DG
Sbjct: 328 GLGHYLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDG 385
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ E C +GDDC+A+KSG D EYG P K+ +IR T S +
Sbjct: 386 FDPDACTDVLCERCTFNTGDDCIAIKSGKDRDTEYG-----PAKRHLIRDCTMNSGHGG- 439
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+ +
Sbjct: 440 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVL 496
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 150/309 (48%), Gaps = 32/309 (10%)
Query: 140 INQLSQYSSDGGAQL----YVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWPVIK 195
I QL Q D + + P G + G+ L S+ L + +D L SQ+L ++P +
Sbjct: 4 ITQLLQREIDQASTVQGTVITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYPEVD 63
Query: 196 PLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQQF------------ 243
+ + AA +I + +V+++G G +DG+G WWQ F
Sbjct: 64 NRVAGINMKWPAA-----MINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGMMAD 117
Query: 244 -HKGKLKYT------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
K L++ RP + + + I ++ + S WN YS +IL+ GITI
Sbjct: 118 YTKKGLRWAADYDCKRPRNILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITI-D 176
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P+TDGI+ DSC I++ YI DD +++K+G +A +++ I+ C
Sbjct: 177 NGKGPSTDGIDIDSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIK--DCQ 234
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMK 416
Y + IA+GSE SGGI++++ + + T +G RIK+A RGG+++ + +TM +
Sbjct: 235 LGYGSGIAIGSETSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVG 294
Query: 417 WAFWMTGNY 425
+ F + N+
Sbjct: 295 FPFLLQTNW 303
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 170/391 (43%), Gaps = 58/391 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S DFGG GD T T+A + AI++ +Q GG + + G WL+G L S+ TL +
Sbjct: 28 SPADFGGKGDDSTLATRAIQQAIDRCAQ---QGGGHVTLGPGVWLSGPIVLKSNVTLVIP 84
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYT----SLIFGTNLTDVIVTGDNGTID 233
L A+ D ++ DA GR T + I + V + G GTID
Sbjct: 85 DGVTLKATPDTAQF------------VDAFLGRPTQPNEAFILANGVRHVAIEG-GGTID 131
Query: 234 GQGA-LWW----------QQFHKGKL--KYT---------RPYLMEFMYTDNIQISSLTL 271
G GA WW + H KY RP+L+E + +I ++ L
Sbjct: 132 GNGAQAWWPAAIALRNTVRSGHPEAFTAKYQGIPLANGMPRPWLVEMNNVTSSEIHNIRL 191
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
NSP WN+ S ++ + +T+ P T+PNTDGI+ S ++ I+ I +GDD +A+K
Sbjct: 192 TNSPMWNLVLRNSQHLKIDQLTVDNPSTAPNTDGIDIVSSSDILIKHADISTGDDHIAIK 251
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVR 391
S GI+ G K I + I+LGSE GI V ++ + E+G+R
Sbjct: 252 S-----GISAGSGVKSENIAIQDSVMRQGHGISLGSETINGIGKVTVSHVRFVGAENGLR 306
Query: 392 IKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHAD--NHYDPKAL---------PV 440
+K+ RG + + V +TM + +T +Y A H + PV
Sbjct: 307 VKSGRDRGNKIGPLQVDHVTMTDVATPLLVTDSYSGQAGAAGHALIAPIAAAPVTPTTPV 366
Query: 441 IQGINYRDIVADNVSMAARLEGISGDPFTGI 471
I GI + A A L G+ P T +
Sbjct: 367 ISGIEVNHLAATGAKYAMILSGLPEAPVTDV 397
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 23/339 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF DG+T +T + A++Q++ + GG +L +PAG++ +G NL S L+L
Sbjct: 4 SLADFHPAADGETPDTAVLQRALDQIA---AAGGGRLTLPAGRYRSGCLNLPSDIELHLD 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+ASQ L ++ ++ L A + L++ ++ ++G G IDG+G
Sbjct: 61 AGAVLIASQQLADYQTVQAL-------SCAEKSHNVLLYALGQRNITLSG-TGRIDGEGD 112
Query: 238 LWWQQFHKG---KLKYT-RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
W+ +L + RP L+ F + + ++ TL+ +P W VH V ++ + +T
Sbjct: 113 AWFAAERDAQGYRLPHADRPRLIVFEDCEQVTLTGFTLVQAPMWTVHLVSCRHVHIDHLT 172
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I +T PNTD ++ DSC + + Y + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDSCEAVFVSNSYFSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM- 412
S YS + +G+E ++DV ++ G+ I + GG ++ + +T
Sbjct: 231 LLRS-YSCALKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTFA 287
Query: 413 -HTMKWAFWMTGNYGSHADNHYDPKALP-VIQGINYRDI 449
H W + + DP P V++ + + I
Sbjct: 288 CHHAPPCHWGKADPLHISVRRRDPAITPGVVEQVQFSTI 326
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 41/327 (12%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITDFG V G+ NTKA AI +Q GG ++ VPAG WLTG + S+ LYL +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+A L + + +++ LP+ + Y+ L++ +V +TG GT+ +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 238 LW--W---QQFHKGKLK----------------------YTRPYLMEFMYTDNIQISSLT 270
W W Q H LK + RP+L+ F N+ +
Sbjct: 166 TWKVWFKRPQPHLEALKELYAKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ SP W +H LV+ + + A N D I+ + N +EDC GDD V +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDDIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
K+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 391 -RIKTAVGRGGYVKDIYVRGMTMHTMK 416
+KT RGG+++++Y++ + T +
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + + N+P W HP N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG + EYG P K+ ++R T S +
Sbjct: 387 FDPDACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYG-----PAKRHLVRNCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+++
Sbjct: 441 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 168/389 (43%), Gaps = 34/389 (8%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW----- 191
D +N+ +++ S GG + +P GKW + L S+ L+L K A + S ++
Sbjct: 465 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDYLPAVF 524
Query: 192 ------PVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G ++ I NG + + W
Sbjct: 525 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 241 -QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
Q+ + G + RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 585 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 643
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ ++I R +
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 702
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM----H 413
I GSE +G I+++ D T +G+R KT RGG + Y + M
Sbjct: 703 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 762
Query: 414 TMKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPFT 469
W + Y Y + + P ++ I +D + ++ GI PF
Sbjct: 763 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMT 498
+ I N I K KK+ D G T
Sbjct: 823 QVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|115359649|ref|YP_776787.1| glycoside hydrolase family protein [Burkholderia ambifaria AMMD]
gi|115284937|gb|ABI90453.1| glycoside hydrolase, family 28 [Burkholderia ambifaria AMMD]
Length = 665
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + N+P W HP S N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ E C +GDDC+A+KSG D EYG P K+ +IR T S +
Sbjct: 387 FDPDACTDVLCERCTFNTGDDCIAIKSGKDRDTEYG-----PAKRHLIRDCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+T+
Sbjct: 441 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 497
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 170/390 (43%), Gaps = 36/390 (9%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEW----- 191
D +N+ +++ S GG + +P GKW + L S+ L+L K A + S ++
Sbjct: 465 DLVNRTIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAKDYLPAVF 524
Query: 192 ------PVIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G ++ I NG + + W
Sbjct: 525 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 241 -QQFH---KGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIA 296
Q+ + KG+ Y RP + + N+ I +T+ S WNV P+Y N++++GIT+ +
Sbjct: 585 EQRIYDGMKGRTFY-RPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS 643
Query: 297 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 356
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ ++I R +
Sbjct: 644 -TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLA 701
Query: 357 SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM---- 412
I GSE +G I+++ D T +G+R KT RGG + Y + M
Sbjct: 702 QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVG 761
Query: 413 HTMKWAFWMTGNYGSHADNHYDPKAL----PVIQGINYRDIVADNVSMAARLEGISGDPF 468
W + Y Y + + P ++ I +D + ++ GI PF
Sbjct: 762 KAFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTANGIPEIPF 821
Query: 469 TGICIANATIGMAAKHKKVPWTCADIGGMT 498
+ I N I K KK+ D G T
Sbjct: 822 NQVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + + N+P W HP N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG + EYG P K+ ++R T S +
Sbjct: 387 FDPDACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYG-----PAKRHLVRNCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+++
Sbjct: 441 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|440761134|ref|ZP_20940226.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425064|gb|ELP22809.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 443
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 165/339 (48%), Gaps = 23/339 (6%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S+ DF V DG+T +T + A++Q++ + GG +L +PAG++ +G NL S F L+L
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 60
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L+AS L ++ ++ L A + L++ ++ ++G G IDG+G
Sbjct: 61 AGAVLIASPRLADYQAVQAL-------SCAEKSHNVLLYALGQRNITISG-TGRIDGEGE 112
Query: 238 LWW--QQFHKG-KL-KYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGIT 293
W+ ++ +G +L + RP ++ F + + +++ T++ +P W VH V ++ + +T
Sbjct: 113 AWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 172
Query: 294 IIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRL 353
I +T PNTD ++ D C + + Y+ + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 354 TCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTM- 412
S YS +G+E ++DV ++ G+ I + GG ++ + +T
Sbjct: 231 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAIRRLLFSNLTFA 287
Query: 413 -HTMKWAFWMTGNYGSHADNHYDPKALP-VIQGINYRDI 449
H W + + DP P +++ + + ++
Sbjct: 288 CHHAPPCHWGKADPLHISVRRRDPAITPGIVEQVQFSNM 326
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + + N+P W HP N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG + EYG P K+ ++R T S +
Sbjct: 387 FDPDACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYG-----PAKRHLVRNCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+++
Sbjct: 441 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 158/317 (49%), Gaps = 31/317 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ S GG + + G + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLD 120
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS ++ +P R R A ++I N + V+G+ GT+D +
Sbjct: 121 KGVTLLASPHIHHYPEF-------RSRIAGIEMTWPAAVINIVNEKNAAVSGE-GTLDCR 172
Query: 236 GALWWQQFHKGKLKYTRPYLMEFMYTD-------------NIQISSLTLLNSPSWNVHPV 282
G ++W ++ + + +Y + L + D +I + TL+ + W +
Sbjct: 173 GKVFWDKYWEMRKEYEKKGLRWIVDYDCKRVRGILVERSSDITLKGFTLMRTGFWGCQVL 232
Query: 283 YSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 340
YS+ + G+ I + P+TDGI+ DS TN IE+C + DD + +KSG D G+
Sbjct: 233 YSNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLR 292
Query: 341 YGMPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
+PT+ +VIR CI+ A I GSE SG I+++ +++A+ T + +R+K+A+ RG
Sbjct: 293 VNLPTENIVIR--NCIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRG 350
Query: 400 GYVKDIYVRGMTMHTMK 416
G +++IY+ + ++
Sbjct: 351 GTIENIYMTDVKAENVR 367
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + + N+P W HP N++++G+T + PN DG
Sbjct: 279 GLGHYLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDG 336
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG + EYG P K+ ++R T S +
Sbjct: 337 FDPDACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYG-----PAKRHLVRNCTMNSGHGG- 390
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+++
Sbjct: 391 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 447
>gi|172064462|ref|YP_001812113.1| glycoside hydrolase family protein [Burkholderia ambifaria MC40-6]
gi|171996979|gb|ACB67897.1| glycoside hydrolase family 28 [Burkholderia ambifaria MC40-6]
Length = 664
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + N+P W HP S N++++G+T + PN DG
Sbjct: 328 GLGHYLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTNS--IGPNNDG 385
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT E C +GDDC+A+KSG D EYG P K+ +IR T S +
Sbjct: 386 FDPDACTAVLCEGCTFNTGDDCIAIKSGKDRDTEYG-----PAKRHLIRDCTMNSGHGG- 439
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+T+
Sbjct: 440 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 496
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 174/398 (43%), Gaps = 57/398 (14%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
+GG DG T NT A + A++ +QY GG + + G WL+G L S+ T L +
Sbjct: 19 YGGRADGNTINTDAIQKAVDMCAQY---GGGVVLLSKGVWLSGPITLKSNITFSLGQGTV 75
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA-LWW 240
L A+ +++ D + + I ++ DV + G GTIDG G WW
Sbjct: 76 LKANNTDDQFK--------NAFIDYPVQKGEAFILADHVHDVSIVG-QGTIDGDGQQTWW 126
Query: 241 QQ-------FHKG-----KLKYT---------RPYLMEFMYTDNIQISSLTLLNSPSWNV 279
+ H+G K +Y+ RP+L+EF N+ + + L N+P WNV
Sbjct: 127 AKAKQINALLHQGNDQLFKQEYSGVPIANGVPRPWLIEFNDVQNVHLKGVLLTNAPMWNV 186
Query: 280 HPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 339
S ++ + I I P SPNTDGI+ S +I D I +GDD +++KSG +
Sbjct: 187 VIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSSQYIQISDVDISTGDDNISIKSGLQQ--- 243
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
+P + + I+ + I++GSE + GI V ++I + +G+RIK+ RG
Sbjct: 244 GNALPARDITIKNSLMHDGHG--ISIGSETANGIGKVTIQNIHFSGSTNGIRIKSQRDRG 301
Query: 400 GYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYDPKAL-------------PVIQGINY 446
+ I V + M + + +Y N Y ++ P+I I
Sbjct: 302 NSIGPITVDHIQMENVTNPIVINASYSV---NSYKKRSFKEALKQKELTSLTPLIHDILL 358
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKH 484
DI N + L G+ I + + I M AKH
Sbjct: 359 SDIHVVNADNSIILSGLPEAFIWNIVLDH--IFMQAKH 394
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ ++ N+P W HP N++++G+T + PN DG
Sbjct: 332 GLGHYLRPCMVEFIGCTNVLMADYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDG 389
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ E+C +GDDC+A+KSG + EYG P K+ +IR T S +
Sbjct: 390 FDPDACTDVLCEECTFNTGDDCIAIKSGKNLDTEYG-----PAKRHLIRNCTMNSGHGG- 443
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ + A ++ +N +R+KT + RGGYVKD +V+G+++
Sbjct: 444 ITLGSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 500
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 148/310 (47%), Gaps = 28/310 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I DFG VGDGK+ +TKA + AI+ ++ + VP G +LTG+ S+ TLY+
Sbjct: 119 NIKDFGAVGDGKSLDTKAIQQAIDACNKQ-----GIVVVPKGVYLTGALFFKSYMTLYIE 173
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNL-----TDVIVTGDNGTI 232
+ A L S DL +P+++ R +Y SLI G L + + G G I
Sbjct: 174 EGAILKGSSDLAHYPIVRS-----RFEGIEGSQYASLINGGTLLSGGIQEFSIRG-KGII 227
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
D G Q K L Y R ++ M +NI + +T L SP+W VH +Y + ++ +
Sbjct: 228 DANGENLINQQKKEGLGY-RGRILSLMNGENICLEGVTFLQSPAWGVHFIYCMGVTIKDV 286
Query: 293 TI---IAPVTS-----PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
I P T N DG+ DS + + + I S DD V++KSG D G
Sbjct: 287 YINTRFDPETGRKYKIHNGDGLTIDSSKDIVVYNTTISSQDDNVSIKSGRDNDGRRVAKS 346
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
T ++ C + +GSEM+G +++V + NT ++K GRGG +++
Sbjct: 347 TDN--VKLFDCKFLGGFGVVVGSEMAGNVRNVLVNNCFYENTACVSQLKAPWGRGGVIEN 404
Query: 405 IYVRGMTMHT 414
I + + +HT
Sbjct: 405 ITFKNI-VHT 413
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 35/319 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ S GG + + G + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLD 120
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS ++ +P R R A ++I N + V+G+ GT+D +
Sbjct: 121 KGVTLLASPHIHHYPEF-------RSRIAGIEMTWPAAVINIVNEKNAAVSGE-GTLDCR 172
Query: 236 GALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + +I + TL+ + W
Sbjct: 173 GKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVE--RSSDITLKGFTLMRTGFWGCQ 230
Query: 281 PVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS+ + G+ I + P+TDGI+ DS TN IE+C + DD + +KSG D G
Sbjct: 231 VLYSNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADG 290
Query: 339 IAYGMPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
+ +PT+ +VIR CI+ A I GSE SG I+++ +++A+ T + +R+K+A+
Sbjct: 291 LRVNLPTENIVIR--NCIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMN 348
Query: 398 RGGYVKDIYVRGMTMHTMK 416
RGG +++IY+ + ++
Sbjct: 349 RGGTIENIYMTDVKAENVR 367
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 169/389 (43%), Gaps = 34/389 (8%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL-LASQDLNEWP--- 192
D +N+ +++ S+ GG + +P GKW + L S+ L+L K A + A + + P
Sbjct: 126 DVVNRTIAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDYLPAVF 185
Query: 193 -------VIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G + I NG + + W
Sbjct: 186 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 245
Query: 241 -QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
Q+ + G + RP + + N+ I + + S WNV P+Y N++++GIT+ +
Sbjct: 246 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS- 304
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ +VI R +
Sbjct: 305 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 363
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
I GSE +G I+++ D T +G+R KT RGG + Y + M +
Sbjct: 364 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 423
Query: 418 AF--------WMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
AF + G + + P ++ I +D + ++ GI PF
Sbjct: 424 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 483
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMT 498
+ + N I K KK+ D G T
Sbjct: 484 QVVVENGEI----KCKKLIGALNDATGFT 508
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 169/389 (43%), Gaps = 34/389 (8%)
Query: 138 DAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAFL-LASQDLNEWP--- 192
D +N+ +++ S+ GG + +P GKW + L S+ L+L K A + A + + P
Sbjct: 140 DVVNRTIAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDYLPAVF 199
Query: 193 -------VIKPLPS-YGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW---- 240
++ P Y G + A I+G + I NG + + W
Sbjct: 200 TRHEGVEIMGPAAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 259
Query: 241 -QQFHKGK--LKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
Q+ + G + RP + + N+ I + + S WNV P+Y N++++GIT+ +
Sbjct: 260 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS- 318
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
P+ DGI+ +SC N IE C + GDDC +K+G E G+ G PT+ +VI R +
Sbjct: 319 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 377
Query: 358 PYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKW 417
I GSE +G I+++ D T +G+R KT RGG + Y + M +
Sbjct: 378 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 437
Query: 418 AF--------WMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFT 469
AF + G + + P ++ I +D + ++ GI PF
Sbjct: 438 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 470 GICIANATIGMAAKHKKVPWTCADIGGMT 498
+ + N I K KK+ D G T
Sbjct: 498 QVVVENGEI----KCKKLIGALNDATGFT 522
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 160/335 (47%), Gaps = 52/335 (15%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQ-LSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITD+ DGK S + AINQ +++ S GG ++ +P G + T L S+ L+L
Sbjct: 26 ITDYY---DGKDS---LYTKAINQAITECSVQGGGKVIIPKGIYPTAPIRLKSNVNLHLA 79
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQG- 236
A L + D N + ++ R + LI+ ++ +TG NG +DGQ
Sbjct: 80 DSAVLKFTTDYNLFDTVRT-----RLEGIDCYNISPLIYAYEEVNIAITG-NGIMDGQAD 133
Query: 237 -ALWW-------------QQFHKGKLKYT-------------------RPYLMEFMYTDN 263
+ W+ + ++ L Y RP + N
Sbjct: 134 RSNWFCDERIRGVVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSIRPQFINLYKCKN 193
Query: 264 IQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVS 323
I + T+ +P W +HP+ S N+ ++ + + + N DG +P+SC N IE C +
Sbjct: 194 ILLEGFTINRAPFWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPESCNNVLIEYCDFDT 251
Query: 324 GDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKA 383
GDDC+A+KSG DE G + +P++ +++R + A +A+GSE++GG ++V E+ +
Sbjct: 252 GDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTGGCRNVWVENCRM 310
Query: 384 INTESG--VRIKTAVGRGGYVKDIYVRGMTMHTMK 416
+ E +RIK+ RGG V++++VR + + K
Sbjct: 311 DSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECK 345
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 166/346 (47%), Gaps = 38/346 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ + GG + + G + TG+ + S L +
Sbjct: 59 SANSFGAVADSTVLSTEAIQKAIDSCA---VSGGGTVVLQPGYYQTGALFVKSGVNLQIG 115
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS D++ +P R R A ++I + + ++G+ GT+D +
Sbjct: 116 KGVTLLASPDIHHYPEF-------RSRIAGIEMTWPAAVINIVDEKNAAISGE-GTLDCR 167
Query: 236 GALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + +I +S TL+ + W
Sbjct: 168 GKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVE--RSSDITLSGFTLMRTGFWGCQ 225
Query: 281 PVYSSNILVQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS + G+TI + P+TDGI+ DS N IE+C + DD + +KSG D G
Sbjct: 226 ILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADG 285
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ PT+ +V+R T + I GSE SG I++V D+KA+ T + +R+K+A+ R
Sbjct: 286 LRVNRPTENVVVRNCTA-RKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNR 344
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKALP 439
GG +++IY+ ++ ++ N+ S Y+ K +P
Sbjct: 345 GGTIENIYMTRVSAENVRQVLAADLNWNPSYSYSTLPKEYEGKEIP 390
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 45/400 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITD+G G+ +NTKA AI + GG ++ VPAG WLTG + S+ LYL +
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
+A L + + +++ LP+ + Y+ L++ +V +TG GT+ +
Sbjct: 111 NAILNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 238 LW--W---QQFHKGKLK----------------------YTRPYLMEFMYTDNIQISSLT 270
W W Q H LK + RP+L+ F N+ +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 271 LLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 330
+ SP W +H LV+ + + A N DGI+ + N +EDC GDD V +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKA--HGDNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 331 KSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV 390
K+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 391 -RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADN---HYDPKALPVIQGINY 446
+KT RGG+++++Y++ + T + + + Y+ + + I GI
Sbjct: 342 FFVKTNHRRGGFIENVYMKNVQAGTAQRVLEIDTEVLYQWKDLVPTYEER-ITRIDGIYM 400
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKK 486
+ ++ L+G + P + I N +G K K
Sbjct: 401 DKVTCESADAIYELKGDAKLPVKNVTIKNVKVGEVKKFVK 440
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 33/309 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ + GG + + G + TG+ + S L +
Sbjct: 59 SANSFGAVADSTVLSTEAIQKAIDSCA---VSGGGTVILQPGYYQTGALFVKSGVNLQIG 115
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS D++ +P R R A ++I + + V+G+ GT+D +
Sbjct: 116 KGVTLLASPDIHHYPEF-------RSRIAGIEMTWPAAVINIVDEKNAAVSGE-GTLDCR 167
Query: 236 GALWWQQFHKGKLKYT---------------RPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + +I +S TL+ + W
Sbjct: 168 GKVFWDKYWEMRKEYVAKGLRWIVDYDCKRVRGILVE--RSSDITLSGFTLMRTGFWGCQ 225
Query: 281 PVYSSNILVQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS + G+TI + P+TDGI+ DS N IE+C + DD + +KSG D G
Sbjct: 226 ILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADG 285
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ PT+ +V+R T + I GSE SG I+++ D+KA+ T + +R+K+A+ R
Sbjct: 286 LRVNRPTENVVVRNCTA-RKGAGLITCGSETSGSIRNILGYDLKAVGTSTVLRLKSAMNR 344
Query: 399 GGYVKDIYV 407
GG +++IY+
Sbjct: 345 GGTIENIYM 353
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 176/400 (44%), Gaps = 45/400 (11%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
ITD+G G+ +NTKA AI + GG ++ VPAG WLTG + S+ LYL +
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAL 238
+A L + N + + + + G + Y+ L++ +V +TG GT+ +
Sbjct: 111 NAILNFTD--NPFDYLPAVMTSWEGLECY--NYSPLLYAFECENVAITG-KGTLQPKMDT 165
Query: 239 W--W---QQFHKGKLK----------------------YTRPYLMEFMYTDNIQISSLTL 271
W W Q H LK + RP+L+ F N+ + +
Sbjct: 166 WKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFKI 225
Query: 272 LNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 331
SP W +H LV+ + + A N DGI+ + N +EDC GDD V +K
Sbjct: 226 RESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 283
Query: 332 SGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGV- 390
+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMRLF 342
Query: 391 RIKTAVGRGGYVKDIYVR----GMTMHTMKWAFWMTGNYGSHADNHYDPKALPVIQGINY 446
+KT RGG+++++Y++ GM ++ + + + + + I GI
Sbjct: 343 FVKTNHRRGGFIENVYMKNVQAGMAQRVLEIDTEVLYQWKDLVPTY--EERITRIDGIYM 400
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKK 486
+ ++ L+G + P + I N +G K K
Sbjct: 401 DKVTCESADAIYELKGDAKLPVKNVTIKNVKVGEVKKFVK 440
>gi|358065987|ref|ZP_09152521.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
gi|356695850|gb|EHI57475.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
Length = 425
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 152/313 (48%), Gaps = 46/313 (14%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
+I ++G VGDGKT A + AI++ S G ++ +PAG++L+G L S+ LYL
Sbjct: 4 NILEYGAVGDGKTDCAAAIQKAIDRCSVK----GGRVVIPAGRFLSGFLQLKSNVELYLE 59
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
A L++ DL+ D A + G N+T ++G NGTIDGQG
Sbjct: 60 HGAVLVS--DLS---------------DEEAKYFLFACHGENIT---ISG-NGTIDGQGR 98
Query: 238 LWW------QQFHKGKLKY--TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILV 289
L + H+ L RP F +N+ + +T ++ W +H N++V
Sbjct: 99 LRFVDDNADHGAHECPLFVAGNRPRTSYFEDIENLTVRDVTFYDAAFWTLHMAGCRNVMV 158
Query: 290 QGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW---DEYGIAYGMPTK 346
G+ I+ PN DGI+PDSC N I +C I SGDD + VKS ++YG +
Sbjct: 159 DGVRILNNDRGPNNDGIDPDSCKNVVIRNCIIESGDDAIVVKSTKAMSEKYG-----SCE 213
Query: 347 QLVIRRLTCI-SPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+VI+ CI + + +G+E G I+++ D + V I + GG + DI
Sbjct: 214 NVVIQ--GCILHTRDSALKIGTESFGDIRNILFCDCIVRDCSRAVGIWSR--DGGVISDI 269
Query: 406 YVRGMTMHTMKWA 418
+R +T +T ++A
Sbjct: 270 QIRHVTGNTRRYA 282
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 166/346 (47%), Gaps = 38/346 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ + GG + + G + TG+ + S L +
Sbjct: 59 SANSFGAVADSTVLSTEAIQKAIDSCA---ISGGGTVVLQPGYYQTGALFVKSGVNLQIG 115
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS D++ +P R R A ++I + + ++G+ GT+D +
Sbjct: 116 KGVTLLASPDIHHYPEF-------RSRIAGIEMTWPAAVINIVDEKNAAISGE-GTLDCR 167
Query: 236 GALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + +I +S TL+ + W
Sbjct: 168 GKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVE--RSSDITLSGFTLMRTGFWGCQ 225
Query: 281 PVYSSNILVQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS + G+TI + P+TDGI+ DS N IE+C + DD + +KSG D G
Sbjct: 226 ILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADG 285
Query: 339 IAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGR 398
+ PT+ +V+R T + I GSE SG I++V D+KA+ T + +R+K+A+ R
Sbjct: 286 LRVNRPTENVVVRNCTA-RKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNR 344
Query: 399 GGYVKDIYVRGMTMHTMKWAFWMTGNYG-----SHADNHYDPKALP 439
GG +++IY+ ++ ++ N+ S Y+ K +P
Sbjct: 345 GGTIENIYMTRVSAENVRQVLAADLNWNPSYSYSTLPKEYEGKEIP 390
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 176/397 (44%), Gaps = 49/397 (12%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
++TD+G GD NT A + AI+ Q + GG + P G +LTG+ + ++ +
Sbjct: 51 NVTDYGAKGDALEMNTTAIQKAIDAAEQ--AGGGIVTFSP-GIYLTGALFVGNNVNFNIP 107
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA 237
K L+ SQD++++ I R ++L+ + ++GD G I+G+G
Sbjct: 108 KGTTLIGSQDIDDYKKIDT-----RVAGVEMNWPSALVNIIGKKNAAISGD-GVINGRGK 161
Query: 238 LWWQQFHKGKLKY-------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYS 284
++W ++ + +Y RP + +N+ + ++ L W++H +YS
Sbjct: 162 VFWDKYRSMRKEYDPKGLRWIVDYDCERPRGILIAECENVTVENIVLYQPGFWSLHILYS 221
Query: 285 SNILVQGITIIAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYG 342
+ V GI I + P+TDGI+ DS +++ I DD +K+G D G+
Sbjct: 222 KYVTVDGIIISNNIEGRGPSTDGIDIDSSEYILVQNSNINCNDDNFCLKAGRDSDGLRVN 281
Query: 343 MPTKQLVIRRLTCISPY-SATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGY 401
P + +VIR CI+ + GSE SGGI ++ A ++ + T+ G+R K+ RGG
Sbjct: 282 RPCRYVVIR--DCIAGHGDGLFTCGSETSGGINNIVAYNMTGMGTKYGLRFKSTCQRGGV 339
Query: 402 VKDIYVRGMTMHTMKWAF-----WMTGNYGSHADNHYDPKALPV---------------- 440
++DIY+ + M ++ F W S YD K +P
Sbjct: 340 IEDIYLCNIEMIGVRDPFVVDLNWHPAYSTSKLPEGYDEKNVPTHWIKMLTPVDPKQGTP 399
Query: 441 -IQGINYRDIVADNVSMAARLEGISGDPFTGICIANA 476
+ +++ ++ A N ++ GI G N
Sbjct: 400 KFRNVHFMNVTATNAQTCIKVSGIENSTIDGFDFDNV 436
>gi|145332593|ref|NP_001078162.1| polygalacturonase [Arabidopsis thaliana]
gi|332642198|gb|AEE75719.1| polygalacturonase [Arabidopsis thaliana]
Length = 452
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 51/346 (14%)
Query: 104 SFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLT 163
S + I +++ +T FG VGDG T +++AF A + + DG Q VPAG
Sbjct: 10 SLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDG--QFVVPAG---- 63
Query: 164 GSFNLISHFTLYLHKDAFLLASQDLNEWPVIKPL------PSYGRGRDAAAGRYTSLIFG 217
T L F + + PV + PS G + G I
Sbjct: 64 --------MTFMLQPLKFQGSCKST---PVFVQMLGKLVAPSKGNWK----GDKDQWILF 108
Query: 218 TNLTDVIVTGDNGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSW 277
T++ +++ GD G I+GQG+ WW+ HKG +RP F +N+++S LT L+SP
Sbjct: 109 TDIEGLVIEGD-GEINGQGSSWWE--HKG----SRP---TFRSCNNLRLSGLTHLDSPMA 158
Query: 278 NVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEY 337
++H + + + + I AP +SPNTDGI+ + +N I+DC I +GDDC+A+ SG
Sbjct: 159 HIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG---- 214
Query: 338 GIAYGMPTKQLVIRRLTCISPYSATI-ALGSE-MSGGIQDVRAEDIKAINTESGVRIKTA 395
T + I + C + +I +LG + + +++V ++ T +G RIKT
Sbjct: 215 -------TSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTW 267
Query: 396 VGRGGYVKDIYVRGMTMHTMKWAFWMTGNY-GSHADNHYDPKALPV 440
G GY + I G+T+ ++ + Y G +DN D K+ V
Sbjct: 268 QGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAV 313
>gi|365887924|ref|ZP_09426736.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
gi|365336466|emb|CCD99267.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
Length = 527
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 193/459 (42%), Gaps = 80/459 (17%)
Query: 92 RGAESRKARRLDSFEYNAISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGG 151
RG ESR R + +A C + FG V DGKT N A + AI+ +Q GG
Sbjct: 25 RGDESRGGHR--DHDDHARQCDSRR-----FGAVNDGKTDNAAAIQAAIDHCAQ---GGG 74
Query: 152 AQLYVPAGKWLTGSFNLISHFTLYLHKDAFLLASQDLNEWP---VIKPL-----PSYGRG 203
G ++TG L SH L + L + D + + + P P+
Sbjct: 75 VVPISGGGTFVTGPIQLRSHVVLRIDAPTVLKNTTDHSRYQPAFIGYPFRFANDPAVSGT 134
Query: 204 RDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGA--------------LWWQQFHKGKLK 249
A +GR ++I + D + GD GTIDG GA WWQ K
Sbjct: 135 GPALSGRPEAMISAIDAEDTGIVGD-GTIDGSGADPAAAATSDNPGALSWWQLAANAKKA 193
Query: 250 YT---------------RPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITI 294
T RP+L+EF + +++I + L NSP WN+ Y ++++V G+ +
Sbjct: 194 GTPYPAFPDIPTSNGLPRPWLVEFYNSRHLRIRGVLLTNSPMWNLGLRYDTDVVVDGLRV 253
Query: 295 IA----PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD-----EYGI---AYG 342
P +PNTDGI+ T R+ + I +GDD +A+KSG G+ AY
Sbjct: 254 YNNANDPTGAPNTDGIDLVGSTGIRLVNLDIDTGDDNLALKSGLPGIDPAHPGVPTFAYY 313
Query: 343 MPTKQLVIRRLTCISPYSAT------IALGSEMSGGIQDVRAEDIKAINTESGVRIKTAV 396
P L L+ + +T +++GSE G+ +RA+DI + T++G RIKT
Sbjct: 314 KPPYNLPKLPLSHVDIAHSTFKRGHGLSVGSETVNGVNHIRAQDITFLGTDNGFRIKTGR 373
Query: 397 GRGGYVKDIYVRGMTMHTMKWAFWMTGNY-----GSHAD--NHYDPKALPVIQGINYRDI 449
RG + + + +TM + ++ Y + D P+ P + I D+
Sbjct: 374 DRGNEIFGMKISRLTMTDVPTPISISEYYPTIPTATQGDLVQPQIPETQPRVHDIAISDV 433
Query: 450 VADN-------VSMAARLEGISGDPFTGICIANATIGMA 481
A N V+ + G+ P I ++ +I A
Sbjct: 434 TATNPQTVRNVVTSGGLIIGVPESPVLNITLSRISITSA 472
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 158/319 (49%), Gaps = 31/319 (9%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAG-KWLTGSFNLISHFTLYL 176
++ D+G GDG + + A + AI+ S+ GG ++ +P G +++GS L S+ LY+
Sbjct: 4 NVRDYGAAGDGASKDRNAIQKAIDACSEA---GGGRVVLPGGGTYMSGSLVLRSNVELYV 60
Query: 177 HKDAFLLASQDLNEWPVIKP------------LPSYGRGRDAAAGRYTSLIFGTNLTDVI 224
A L AS D +++ + P LPSY RY I+G ++
Sbjct: 61 ESGAVLKASTDPSDYQPLDPQDPEGSVEHEESLPSYINCEYDGKPRYY-FIYGRGGENIR 119
Query: 225 VTGDNGTIDGQGALWWQQ---FHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHP 281
+TG GTIDG +++ + +H Y R ++ +++ + +TL W +H
Sbjct: 120 ITG-FGTIDGSEEIYYGKQIRYHIEGAYYPRIPMILMEDVEHLTVRDVTLTRCAFWTLHM 178
Query: 282 VYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS--GWDEYGI 339
++LV + I+ + N DGI+PD C + RI +C++ DDC+ +K+ G+++YG
Sbjct: 179 AGCRDVLVDSVRILNNLRMANCDGIDPDHCQDVRIVNCHVECADDCIVLKNTKGFEKYG- 237
Query: 340 AYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRG 399
P K ++I T IS SA + +G+E +++ E+ T G+ + +
Sbjct: 238 ----PCKNILISGCTLISTSSA-VKIGTESEDDFENIIIENCCISRTNRGISLH--LRDK 290
Query: 400 GYVKDIYVRGMTMHTMKWA 418
G ++++ V +T+ T +++
Sbjct: 291 GNIRNVLVSNVTIETRRFS 309
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%)
Query: 369 MSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSH 428
MSGGI D+ ++ ++ G+ KT+ GRGGY++D+ + + M + TGN +H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 429 ADNHYDPKALPVIQGINYRDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKKVP 488
D+ +DP LP I + +++ N+S+A L GI G PFT IC++N MAA
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 489 WTCADIGGMTSGVTPPPCELLPD 511
W+C+D+ G + V P PC L D
Sbjct: 121 WSCSDVSGYSEAVFPEPCTELRD 143
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 159/319 (49%), Gaps = 35/319 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ S GG + + G + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLD 120
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS ++ +P R R A ++I N + V+G+ GT+D +
Sbjct: 121 KGVTLLASPHIHHYPEF-------RSRIAGIEMTWPAAVINIVNEKNAAVSGE-GTLDCR 172
Query: 236 GALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + ++ + TL+ + W
Sbjct: 173 GKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVE--RSSDVTLKGFTLMRTGFWGCQ 230
Query: 281 PVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS+ + G+ I + P+TDGI+ DS TN IE+C + DD + +KSG D G
Sbjct: 231 VLYSNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADG 290
Query: 339 IAYGMPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
+ +PT+ +VIR CI+ A I GSE SG I+++ +++A+ T + +R+K+A+
Sbjct: 291 LRVNLPTENVVIR--NCIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMN 348
Query: 398 RGGYVKDIYVRGMTMHTMK 416
RGG +++IY+ + ++
Sbjct: 349 RGGTIENIYMTDVKAENVR 367
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 174/400 (43%), Gaps = 43/400 (10%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
ITDFG V G+ NTKA AI+ ++ GG ++ VPAG WLTG + S+ L L
Sbjct: 42 KITDFGAVPGGEVDNTKAIAAAIDACNKA---GGGRVVVPAGIWLTGPVHFKSNINLCLE 98
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
+DA L + + ++ LP+ + Y+ L++ +V ++G GT+ +
Sbjct: 99 EDAVLSFTDNPEDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 152
Query: 237 ALWWQQF-----HKGKLK----------------------YTRPYLMEFMYTDNIQISSL 269
W F H LK + RP+L+ F N+ +
Sbjct: 153 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMAIGENHLRPHLIHFNRCKNVMLDGF 212
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
+ SP W +H +V+ + + A N DGI+ + N +EDC GDD V
Sbjct: 213 KIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVV 270
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+K+G ++ P + +VIR + ++ + +GSE+SGGI+++ D A N+
Sbjct: 271 IKAGRNQDAWRLNTPCENIVIRNCRILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 329
Query: 390 V-RIKTAVGRGGYVKDIYVRGMTMHTMKWAFWMTGNYGSHADNHYD--PKALPVIQGINY 446
+ +KT RGG++++IY++ + T + + + K + I GI
Sbjct: 330 LFFVKTNHRRGGFIENIYMKNVASGTAQRVLEIDTEVLYQWKDLVPTYEKRITRIDGIYM 389
Query: 447 RDIVADNVSMAARLEGISGDPFTGICIANATIGMAAKHKK 486
+ ++ L+G + P + I + +G K K
Sbjct: 390 DKVTCESADAVYELKGNAELPVKNVRIKDVKVGSVKKFVK 429
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 155/310 (50%), Gaps = 35/310 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ + GG + + G + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCAVI---GGGTVVLQPGYYQTGALFIKSGVNLQLD 120
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS ++ +P R R A ++I N + V+G+ GT+D +
Sbjct: 121 KGVTLLASPSIHHYPEF-------RSRIAGIEMTWPAAVINIVNEKNASVSGE-GTLDCR 172
Query: 236 GALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + +I + TL+ + W
Sbjct: 173 GKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQ 230
Query: 281 PVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G
Sbjct: 231 ILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADG 290
Query: 339 IAYGMPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
+ +PT+ +VIR CI+ A I GSE SG I++V +++AI T + +R+K+A+
Sbjct: 291 LRVNLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMN 348
Query: 398 RGGYVKDIYV 407
RGG +++IY+
Sbjct: 349 RGGTIENIYM 358
>gi|414876106|tpg|DAA53237.1| TPA: hypothetical protein ZEAMMB73_980438 [Zea mays]
Length = 437
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 170/405 (41%), Gaps = 57/405 (14%)
Query: 119 ITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHK 178
+ +F DGKT + KAF A + S + + VP G+
Sbjct: 73 VRNFHAAADGKTDDAKAFLAAWK--AACSDEARPVVVVPGGR------------------ 112
Query: 179 DAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTS------LIFGTNLTDVIVTGDNGTI 232
FLL SQ + P P+ GR A R + L+F + D + NG I
Sbjct: 113 -TFLL-SQVTFQGPCKSPITIQLDGRIVAPNRIWTTQPANLLVF--HGVDSLTLDGNGEI 168
Query: 233 DGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGI 292
DG+GA+WW ++ + RP L+ F + D+++++ + L NS ++ S LV G+
Sbjct: 169 DGRGAIWWDCYNHKRCN-ARPILLAFSFCDHLRVTRIRLTNSADKHMTLFRCSQALVDGV 227
Query: 293 TIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 352
+I AP SPNTDGI S +T I +C I SGDDCV++ S T+ + + R
Sbjct: 228 SIAAPPDSPNTDGITVASSNHTVISNCSIRSGDDCVSILS-----------QTRNVTVTR 276
Query: 353 LTCISPYSATI-ALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMT 411
TC + ++ +LG S ++ + + + T +GVRIK+ G GY K G+
Sbjct: 277 STCGPGHGISVGSLGRSESAVVEQIVVTNCSFVGTMNGVRIKSWQGGKGYAKGFLFAGLN 336
Query: 412 MHTMKWAFWMTGNYGSHADNHYDPKALPV-------IQGINYRDIVADNVSMAARLEGIS 464
M +++ + Y + P + + IQG + R A RL
Sbjct: 337 MTGVQYPIVIDQFYCPQGNCPVKPGGVAITDARFIDIQGTSSRQ-------EAIRLLCSQ 389
Query: 465 GDPFTGICIANATIGMAAKHKKVPWTCADIGGMTSGVTPPPCELL 509
GI ++N + T + G T GV P + L
Sbjct: 390 SVHCHGIYLSNVNLSWVNHTAPSNATILNAHGTTEGVVVPKIQFL 434
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 35/310 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ + GG + + G + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCA---VSGGGTVVLQPGYYQTGALFIKSGVNLQLD 120
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS ++ +P R R A ++I N + ++G+ GT+D +
Sbjct: 121 KGVTLLASPSIHHYPEF-------RSRIAGIEMTWPAAVINIVNEKNASISGE-GTLDCR 172
Query: 236 GALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + +I + TL+ + W
Sbjct: 173 GKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQ 230
Query: 281 PVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G
Sbjct: 231 ILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADG 290
Query: 339 IAYGMPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
+ +PT+ +VIR CI+ A I GSE SG I++V +++AI T + +R+K+A+
Sbjct: 291 LRVNLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMN 348
Query: 398 RGGYVKDIYV 407
RGG +++IY+
Sbjct: 349 RGGTIENIYM 358
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 35/310 (11%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
S FG V D +T+A + AI+ + GG + + G + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCAVI---GGGTVVLQPGYYQTGALFIKSGVNLQLD 120
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRY--TSLIFGTNLTDVIVTGDNGTIDGQ 235
K LLAS P I P + R R A ++I N + V+G+ GT+D +
Sbjct: 121 KGVTLLAS------PYIHHYPEF-RSRIAGIEMTWPAAVINIVNEKNASVSGE-GTLDCR 172
Query: 236 GALWWQQFHKGKLKY---------------TRPYLMEFMYTDNIQISSLTLLNSPSWNVH 280
G ++W ++ + + +Y R L+E + +I + TL+ + W
Sbjct: 173 GKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIE--RSSDITLKGFTLMRTGFWGCQ 230
Query: 281 PVYSSNILVQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYG 338
+YS + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G
Sbjct: 231 ILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADG 290
Query: 339 IAYGMPTKQLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVG 397
+ +PT+ +VIR CI+ A I GSE SG I++V +++AI T + +R+K+A+
Sbjct: 291 LRVNLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMN 348
Query: 398 RGGYVKDIYV 407
RGG +++IY+
Sbjct: 349 RGGTIENIYM 358
>gi|262408433|ref|ZP_06084980.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|294643092|ref|ZP_06720926.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808960|ref|ZP_06767684.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508645|ref|ZP_08788271.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353985|gb|EEZ03078.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|292641551|gb|EFF59735.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294443841|gb|EFG12584.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455055|gb|EEO51472.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 487
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 154/305 (50%), Gaps = 27/305 (8%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG D +T A + AI+ Q GG + V G + G+ + S L+L K
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQ---QGGGTVVVAQGYYKIGALFIKSGVNLHLSKGTT 114
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
LLAS ++ ++P PS G + +++I + + +TG+ G ID +G ++W
Sbjct: 115 LLASDNIQDYP---EFPSRIAGIEMTWP--SAVINIMDAENAALTGE-GFIDCRGKVFWD 168
Query: 242 QFHKGKLKYTRPYLMEFMYTD-------------NIQISSLTLLNSPSWNVHPVYSSNIL 288
++ + +Y + L + D +I + TL+ + W +YS +
Sbjct: 169 KYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCS 228
Query: 289 VQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT+
Sbjct: 229 VSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTE 288
Query: 347 QLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+V+R CI+ A + GSE SG I++V A D+ A T S +R+K+++ RGG V++I
Sbjct: 289 NVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENI 346
Query: 406 YVRGM 410
YV G+
Sbjct: 347 YVTGV 351
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 154/330 (46%), Gaps = 45/330 (13%)
Query: 118 SITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLH 177
SI ++G V GKT NTKA AI ++ GG ++ +PAG+WLTG +L+S+ LYL
Sbjct: 56 SIANYGAVKGGKTINTKAIAKAIKACNKA---GGGRVVIPAGEWLTGPVHLMSNVNLYLS 112
Query: 178 KDAFLLASQDLNEWPVIKPLPSYGRGRDA-AAGRYTSLIFGTNLTDVIVTGDNGTIDGQG 236
A L + + ++ LP+ + Y+ L++ + +V +TG GT+
Sbjct: 113 DGAILRFTDNPEDY-----LPAVMTSWEGMECYNYSPLVYAFDCENVAITG-TGTLQPIM 166
Query: 237 ALWWQQFHKGKLK-------YT--------------------RPYLMEFMYTDNIQISSL 269
W + F + K YT RP+L+ F N+ +
Sbjct: 167 DTWRKWFKRPKPHMDALAELYTMASTDVPVEKRQMAKGENNLRPHLIHFNRCKNVLLDQF 226
Query: 270 TLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 329
+ SP W +H +V+ + + A N DG++ + N IEDC GDD V
Sbjct: 227 KIRESPFWTIHLYMCDGGIVRNLDVYA--HGHNNDGVDLEMSRNFLIEDCKFDQGDDAVV 284
Query: 330 VKSGWDEYGIAYGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESG 389
+K+G ++ P + +VIR I ++ + +GSEMSGGI++V D A +S
Sbjct: 285 IKAGRNQDAWRLDTPCENIVIRNCDIIKGHT-LLGIGSEMSGGIRNVYMHDCAA--PDSV 341
Query: 390 VRI---KTAVGRGGYVKDIYVRGMTMHTMK 416
R+ KT RGG++++I++ + M+
Sbjct: 342 FRLFFAKTNHRRGGFIENIHMENVKAGKMQ 371
>gi|293369336|ref|ZP_06615921.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148480|ref|ZP_07041542.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|336404082|ref|ZP_08584781.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
gi|292635503|gb|EFF54010.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|295086728|emb|CBK68251.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513241|gb|EFI37128.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|335943733|gb|EGN05568.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
Length = 487
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 154/305 (50%), Gaps = 27/305 (8%)
Query: 122 FGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFTLYLHKDAF 181
FG D +T A + AI+ Q GG + V G + G+ + S L+L K
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQ---QGGGTVVVAPGYYKIGALFIKSGVNLHLSKGTT 114
Query: 182 LLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWWQ 241
LLAS ++ ++P PS G + +++I + + +TG+ G ID +G ++W
Sbjct: 115 LLASDNIQDYP---EFPSRIAGIEMTWP--SAVINIMDAENAALTGE-GFIDCRGKVFWD 168
Query: 242 QFHKGKLKYTRPYLMEFMYTD-------------NIQISSLTLLNSPSWNVHPVYSSNIL 288
++ + +Y + L + D +I + TL+ + W +YS +
Sbjct: 169 KYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCS 228
Query: 289 VQGITIIAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 346
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT+
Sbjct: 229 VSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTE 288
Query: 347 QLVIRRLTCISPYSA-TIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDI 405
+V+R CI+ A + GSE SG I++V A D+ A T S +R+K+++ RGG V++I
Sbjct: 289 NVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENI 346
Query: 406 YVRGM 410
YV G+
Sbjct: 347 YVTGV 351
>gi|315570532|gb|ADU33270.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 394
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 170/376 (45%), Gaps = 19/376 (5%)
Query: 109 AISCRAHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNL 168
IS + +T +G G+ T A AI + GG ++ P+G++LTG L
Sbjct: 11 VISAVSAIYDVTRYGADRTGRVPCTDAIARAIKDAEIH---GGGLIHFPSGRYLTGPIEL 67
Query: 169 ISHFTLYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGD 228
S+ + + + D +P + G+ R +T LI +V + G+
Sbjct: 68 KSNMVMDVGTGTIITFLDDPALYPPLDVTLPDGQRRSVP---FTPLIRAWGQKNVGIRGN 124
Query: 229 NGTIDGQGALWWQQFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNIL 288
DG+G +WW + TRP + F N+ + T+ +SP +NV+ ++SS I+
Sbjct: 125 KVIFDGRGEIWWDRLPP---PATRPIFVNFFDCHNVVLKGFTIKSSPMFNVNILHSSGIV 181
Query: 289 VQGITIIAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 344
+ G+ I P + PNTDGIN S I + +GDDCV V + W + +P
Sbjct: 182 IDGVRIRNPESYHGRGPNTDGINLVSVRKVHITGVDVATGDDCV-VFNAWGY--LKERVP 238
Query: 345 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKD 404
T+ ++I + +S I++GS +GG++++ + T G+ IKT RGG +++
Sbjct: 239 TEDVLIEN-SYMSVGHGAISIGSVTAGGLRNITVRNCVIDGTTRGLDIKTNRQRGGTIEN 297
Query: 405 IYVRGMTMHTMKWAFWMTGNYGSHADNHYDP--KALPVIQGINYRDIVADNVSMAARLEG 462
I +TM+ ++W + + D + P P I+ I + +I ++G
Sbjct: 298 INYYNITMNRVRWEGIALIDLFNDNDPSWKPIGDQTPFIRNIRFDNIRGSCDRNPILVQG 357
Query: 463 ISGDPFTGICIANATI 478
+ P I I+N I
Sbjct: 358 LPEAPIENIEISNTDI 373
>gi|325106323|ref|YP_004275977.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975171|gb|ADY54155.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 523
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 156/309 (50%), Gaps = 24/309 (7%)
Query: 114 AHSASITDFGGVGDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAGKWLTGSFNLISHFT 173
A + +I DFG VGDG T NT + AI++ + +DGG ++ PAG++L+G+ L + T
Sbjct: 22 AGNYNIKDFGAVGDGITLNTLFIQKAIDKCN---NDGGGKVIFPAGRFLSGTVELKDNVT 78
Query: 174 LYLHKDAFLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTID 233
L+ K+A L+ S DL ++ + P + G G D +L+ + ++ + G+ G ID
Sbjct: 79 LHFEKNAELVGSTDLKDYRNLDPF-TEGLGIDVGW----ALLVAVDAKNIGLEGE-GVID 132
Query: 234 GQGALWWQQF------HKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNI 287
GQG ++ +GK RP+L+ + N+ + +TL + +W H S I
Sbjct: 133 GQGTALKEKHILTDTRPEGKRWGLRPFLLRIVRCTNVNVKDVTLKYAGAWTSHYFQSRKI 192
Query: 288 LVQGITIIAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQ 347
++ +TI + + N DGI D C RI+ C +VSGDD + K+ + M K
Sbjct: 193 NIENVTIRSIGVAHN-DGIGIDGCQEVRIKGCDVVSGDDALVFKT------TSSKMGCKD 245
Query: 348 LVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYV 407
+V+ + S A I G+E ++++ + +T++G IK G +++++ +
Sbjct: 246 IVVSDMKLKSNQGA-IKFGTESMAPFENIKISNCYIYDTKNG-GIKLLTVDGAHIRNVEI 303
Query: 408 RGMTMHTMK 416
+ M +K
Sbjct: 304 SDIVMKNVK 312
>gi|414873520|tpg|DAA52077.1| TPA: hypothetical protein ZEAMMB73_569322 [Zea mays]
Length = 441
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 199/453 (43%), Gaps = 57/453 (12%)
Query: 79 LVPLLIVVALLSQRGAESRKARRLDSFEYNAISCRAHSA-------------SITDFGGV 125
L+PLL + +L GA S A + + +++ R +A S+ +G
Sbjct: 15 LLPLLFMSGVLEAAGAGS-SADGTNGNLHGSVTSRPAAAPRGRSLPESQSVFSLDRYGAR 73
Query: 126 GDGKTSNTKAFKDAINQLSQYSSDGGAQLYVPAG-----KWLTGSFNLISHFTLYLHKDA 180
GDG+ +T+A + A + +S A + VPAG K LT S TL +
Sbjct: 74 GDGRNDDTRALEMAWK--AACASPRPAVVLVPAGRRYLLKLLTLRGPCKSSVTLTVK--G 129
Query: 181 FLLASQDLNEWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGALWW 240
L+AS + +W + + R ++F + D + G IDG G WW
Sbjct: 130 TLVASPNRADW--------------SDSDRRHWIVFRS--IDELTVNGGGAIDGNGEKWW 173
Query: 241 Q---QFHKGKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAP 297
+ +K P + F Y +++ L ++NS ++ S+N+L+ ++I AP
Sbjct: 174 PHSCKINKALPCKEAPTALSFHYCVGLKVEDLKIMNSQQIHMSVEDSANVLLARLSITAP 233
Query: 298 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 357
TSPNTDGI+ + R+ DC I +GDDC+++++G T L + ++TC
Sbjct: 234 GTSPNTDGIHITRSKDVRVTDCKIKTGDDCMSIENG-----------THNLHVSKVTCGP 282
Query: 358 PYSATI-ALGSEMS-GGIQDVRAEDIKAINTESGVRIKTAVGRGGYVKDIYVRGMTMHTM 415
+ +I +LG + S + + + ++ T +G RIKT G GY KDI + M M+ +
Sbjct: 283 GHGISIGSLGDDNSRAEVSGITIDSVQLHGTTNGARIKTYQGGSGYAKDITFQNMVMYDV 342
Query: 416 KWAFWMTGNYGSHADNHYDPKALPVIQGINYRDIVADNVSM-AARLEGISGDPFTGICIA 474
K + NY A + ++ + G+ +++I + A ++ P GI +
Sbjct: 343 KNPIIIDQNYCDRAKPCGEQESAVQVSGVVFKNIRGTTSTKDAIKMNCSENVPCQGITLQ 402
Query: 475 NATIGMAAKHKKVPWTCADIGGMTSG-VTPPPC 506
N + M TC + G V P PC
Sbjct: 403 NIDLEMQDGKGSTRSTCRNAKWREFGTVHPQPC 435
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 18/177 (10%)
Query: 246 GKLKYTRPYLMEFMYTDNIQISSLTLLNSPSWNVHPVYSSNILVQGITIIAPVTSPNTDG 305
G Y RP ++EF+ N+ + + N+P W HP N++++G+T + PN DG
Sbjct: 329 GLGHYLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDG 386
Query: 306 INPDSCTNTRIEDCYIVSGDDCVAVKSGWD---EYGIAYGMPTKQLVIRRLTCISPYSAT 362
+PD+CT+ EDC +GDDC+A+KSG + E G P K+ ++R T S +
Sbjct: 387 FDPDACTDVLCEDCTFNTGDDCIAIKSGKNRDTESG-----PAKRHLVRNCTMNSGHGG- 440
Query: 363 IALGSEMSGGIQDVRAEDIKAINT-------ESGVRIKTAVGRGGYVKDIYVRGMTM 412
I LGSEM GG++ V A ++ +N +R+KT + RGGYVKD +V+G+++
Sbjct: 441 ITLGSEMGGGVEQVYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,805,160,765
Number of Sequences: 23463169
Number of extensions: 386131220
Number of successful extensions: 897223
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2373
Number of HSP's successfully gapped in prelim test: 1662
Number of HSP's that attempted gapping in prelim test: 886207
Number of HSP's gapped (non-prelim): 5160
length of query: 544
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 396
effective length of database: 8,886,646,355
effective search space: 3519111956580
effective search space used: 3519111956580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)