Query 009077
Match_columns 544
No_of_seqs 180 out of 2399
Neff 10.6
Searched_HMMs 46136
Date Thu Mar 28 20:08:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009077.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009077hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.9E-80 4.1E-85 615.6 50.9 500 31-542 22-535 (537)
2 KOG1177 Long chain fatty acid 100.0 1.4E-78 3.1E-83 559.5 42.0 509 23-538 48-586 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 4.1E-76 8.8E-81 607.2 54.7 511 21-539 7-527 (534)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 6.8E-77 1.5E-81 586.7 46.7 491 31-539 15-522 (528)
5 PLN02246 4-coumarate--CoA liga 100.0 7.3E-75 1.6E-79 603.5 59.1 534 6-540 4-537 (537)
6 PLN02574 4-coumarate--CoA liga 100.0 1.2E-71 2.6E-76 581.2 56.6 525 7-540 20-555 (560)
7 COG1021 EntE Peptide arylation 100.0 2.9E-74 6.2E-79 519.1 31.6 509 19-540 22-539 (542)
8 PRK07788 acyl-CoA synthetase; 100.0 1.5E-71 3.2E-76 580.3 51.3 492 25-536 49-548 (549)
9 TIGR02316 propion_prpE propion 100.0 3.5E-71 7.7E-76 584.3 53.1 515 22-541 48-606 (628)
10 PLN02330 4-coumarate--CoA liga 100.0 1.1E-70 2.5E-75 572.8 55.4 531 3-539 6-541 (546)
11 PLN02654 acetate-CoA ligase 100.0 1.1E-70 2.4E-75 581.6 55.0 509 23-539 85-640 (666)
12 PTZ00237 acetyl-CoA synthetase 100.0 7.6E-71 1.6E-75 581.0 52.6 508 24-541 57-625 (647)
13 PLN02860 o-succinylbenzoate-Co 100.0 1.3E-70 2.8E-75 573.8 51.2 503 24-539 6-554 (563)
14 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 4.8E-70 1E-74 576.6 54.9 508 25-540 56-603 (625)
15 PRK13295 cyclohexanecarboxylat 100.0 1.1E-69 2.3E-74 565.7 54.8 512 17-541 16-546 (547)
16 PRK07529 AMP-binding domain pr 100.0 1.3E-69 2.8E-74 571.8 55.3 505 25-541 25-572 (632)
17 PRK06334 long chain fatty acid 100.0 8.1E-70 1.8E-74 563.5 50.5 496 24-538 18-534 (539)
18 PRK00174 acetyl-CoA synthetase 100.0 3.6E-69 7.8E-74 570.8 56.1 508 25-540 66-611 (637)
19 PRK05677 long-chain-fatty-acid 100.0 3.5E-69 7.6E-74 563.3 55.0 505 24-539 23-557 (562)
20 PRK08314 long-chain-fatty-acid 100.0 9.7E-69 2.1E-73 559.5 55.3 503 24-540 9-543 (546)
21 PLN02736 long-chain acyl-CoA s 100.0 2.7E-69 5.9E-74 571.8 49.5 503 22-539 41-641 (651)
22 PRK10524 prpE propionyl-CoA sy 100.0 1.9E-68 4.2E-73 564.8 53.3 513 24-541 51-607 (629)
23 PRK06839 acyl-CoA synthetase; 100.0 3.6E-68 7.7E-73 549.3 53.6 491 26-539 3-495 (496)
24 PRK07656 long-chain-fatty-acid 100.0 4.4E-68 9.5E-73 551.1 54.3 500 25-535 5-512 (513)
25 PRK04319 acetyl-CoA synthetase 100.0 3.7E-68 8.1E-73 556.5 53.0 503 24-539 41-559 (570)
26 PRK13382 acyl-CoA synthetase; 100.0 4.7E-68 1E-72 551.4 52.0 490 25-535 43-536 (537)
27 PRK05605 long-chain-fatty-acid 100.0 1E-67 2.3E-72 554.2 54.8 506 24-539 31-569 (573)
28 PRK05852 acyl-CoA synthetase; 100.0 4.8E-68 1E-72 551.9 50.7 512 20-540 11-533 (534)
29 PRK06187 long-chain-fatty-acid 100.0 2E-67 4.4E-72 547.5 55.4 509 22-541 3-521 (521)
30 PRK05857 acyl-CoA synthetase; 100.0 2.7E-68 5.8E-73 553.5 48.4 512 24-543 13-535 (540)
31 PRK08316 acyl-CoA synthetase; 100.0 2E-67 4.3E-72 547.6 54.8 504 24-539 10-519 (523)
32 PRK09274 peptide synthase; Pro 100.0 2.8E-68 6E-73 556.3 48.5 503 25-540 6-549 (552)
33 PRK08315 AMP-binding domain pr 100.0 2.5E-67 5.4E-72 550.5 55.3 511 23-539 14-551 (559)
34 PRK06155 crotonobetaine/carnit 100.0 3E-67 6.4E-72 545.6 55.3 500 23-540 19-525 (542)
35 PRK07514 malonyl-CoA synthase; 100.0 6E-67 1.3E-71 541.0 55.1 498 25-539 3-501 (504)
36 PRK07786 long-chain-fatty-acid 100.0 9.8E-67 2.1E-71 542.8 56.4 511 18-542 10-527 (542)
37 PRK03584 acetoacetyl-CoA synth 100.0 7.5E-67 1.6E-71 554.5 55.6 511 19-543 80-629 (655)
38 PRK07470 acyl-CoA synthetase; 100.0 7.2E-67 1.6E-71 542.9 54.2 508 24-541 6-520 (528)
39 TIGR01217 ac_ac_CoA_syn acetoa 100.0 7.8E-67 1.7E-71 551.6 54.7 510 19-542 81-629 (652)
40 PRK03640 O-succinylbenzoic aci 100.0 5.9E-67 1.3E-71 538.2 52.4 481 25-539 2-482 (483)
41 PRK07638 acyl-CoA synthetase; 100.0 5.4E-67 1.2E-71 538.3 51.3 483 25-541 1-483 (487)
42 PRK12583 acyl-CoA synthetase; 100.0 2.6E-66 5.7E-71 542.9 57.3 509 25-540 18-553 (558)
43 PLN02614 long-chain acyl-CoA s 100.0 1.5E-67 3.3E-72 556.6 48.1 507 22-539 42-649 (666)
44 PRK06060 acyl-CoA synthetase; 100.0 1.9E-67 4.1E-72 563.3 48.8 480 26-538 5-491 (705)
45 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.5E-66 3.2E-71 539.9 53.4 498 23-534 21-527 (527)
46 PRK06145 acyl-CoA synthetase; 100.0 1.9E-66 4.1E-71 536.2 53.8 495 25-538 2-496 (497)
47 PLN03102 acyl-activating enzym 100.0 1.7E-66 3.7E-71 543.4 53.4 503 25-539 14-554 (579)
48 PRK07867 acyl-CoA synthetase; 100.0 3.1E-66 6.8E-71 535.9 54.6 493 22-542 2-510 (529)
49 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.1E-66 4.5E-71 540.2 53.4 499 24-535 21-538 (538)
50 PRK06087 short chain acyl-CoA 100.0 4.3E-66 9.4E-71 539.2 55.7 508 21-540 19-537 (547)
51 PLN03052 acetate--CoA ligase; 100.0 1.9E-66 4.1E-71 550.4 53.1 506 24-540 173-722 (728)
52 PRK06188 acyl-CoA synthetase; 100.0 4.8E-66 1E-70 536.2 54.5 506 25-543 12-521 (524)
53 PRK07059 Long-chain-fatty-acid 100.0 7.8E-66 1.7E-70 538.1 54.9 519 9-536 2-555 (557)
54 PRK08008 caiC putative crotono 100.0 8.5E-66 1.8E-70 533.7 53.9 499 25-534 7-517 (517)
55 PRK07769 long-chain-fatty-acid 100.0 1.7E-66 3.8E-71 549.7 49.3 506 20-543 16-618 (631)
56 PRK06710 long-chain-fatty-acid 100.0 8.2E-66 1.8E-70 538.7 53.5 503 25-539 24-555 (563)
57 PRK12492 long-chain-fatty-acid 100.0 1.3E-65 2.9E-70 536.3 54.7 503 25-536 24-561 (562)
58 PRK06178 acyl-CoA synthetase; 100.0 1.5E-65 3.3E-70 537.2 54.8 526 6-539 12-565 (567)
59 PRK05620 long-chain-fatty-acid 100.0 7.7E-66 1.7E-70 539.7 52.6 516 21-543 6-561 (576)
60 PRK09088 acyl-CoA synthetase; 100.0 9.7E-66 2.1E-70 529.4 51.8 482 32-540 2-486 (488)
61 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.4E-65 3.1E-70 532.4 53.3 495 26-535 1-514 (515)
62 PTZ00342 acyl-CoA synthetase; 100.0 5.8E-66 1.3E-70 542.6 49.9 507 20-539 56-734 (746)
63 PRK07008 long-chain-fatty-acid 100.0 2.3E-65 5E-70 531.8 53.8 508 25-542 10-536 (539)
64 PRK10946 entE enterobactin syn 100.0 1.7E-65 3.7E-70 532.4 52.2 499 23-539 23-532 (536)
65 PRK08043 bifunctional acyl-[ac 100.0 6.8E-66 1.5E-70 551.4 49.3 496 25-543 204-717 (718)
66 PLN02861 long-chain-fatty-acid 100.0 8.5E-66 1.9E-70 543.9 48.8 506 22-539 40-646 (660)
67 PRK12467 peptide synthase; Pro 100.0 9.4E-67 2E-71 634.3 45.5 499 17-539 3087-3594(3956)
68 PRK13388 acyl-CoA synthetase; 100.0 8.1E-65 1.8E-69 527.1 52.7 488 25-539 3-506 (540)
69 PRK06164 acyl-CoA synthetase; 100.0 7.5E-65 1.6E-69 529.3 52.5 511 17-540 2-533 (540)
70 PRK08279 long-chain-acyl-CoA s 100.0 3.8E-65 8.2E-70 537.1 50.6 501 23-540 35-565 (600)
71 PRK06018 putative acyl-CoA syn 100.0 8.1E-65 1.7E-69 528.4 52.4 509 24-543 9-538 (542)
72 PRK12476 putative fatty-acid-- 100.0 2.6E-65 5.7E-70 538.4 47.5 504 21-543 30-610 (612)
73 PRK08751 putative long-chain f 100.0 3.3E-64 7.2E-69 526.5 53.8 503 25-536 25-557 (560)
74 PRK08633 2-acyl-glycerophospho 100.0 6.7E-65 1.5E-69 575.3 51.8 507 22-538 612-1142(1146)
75 PLN02387 long-chain-fatty-acid 100.0 1.6E-64 3.5E-69 536.2 49.4 506 21-539 54-689 (696)
76 TIGR02262 benz_CoA_lig benzoat 100.0 6.5E-64 1.4E-68 518.3 52.7 495 28-536 7-508 (508)
77 PRK08974 long-chain-fatty-acid 100.0 1.6E-63 3.6E-68 521.0 55.9 521 8-539 1-555 (560)
78 TIGR01734 D-ala-DACP-lig D-ala 100.0 2.8E-64 6E-69 520.9 49.5 490 26-538 1-501 (502)
79 TIGR03443 alpha_am_amid L-amin 100.0 6.3E-65 1.4E-69 582.6 47.8 503 25-535 236-824 (1389)
80 PRK05851 long-chain-fatty-acid 100.0 1E-64 2.3E-69 524.8 44.8 486 27-541 4-524 (525)
81 TIGR03205 pimA dicarboxylate-- 100.0 3.3E-63 7.1E-68 516.5 55.6 500 25-534 21-541 (541)
82 PRK13390 acyl-CoA synthetase; 100.0 3.9E-64 8.5E-69 519.0 47.7 489 32-534 4-501 (501)
83 PRK08180 feruloyl-CoA synthase 100.0 2.9E-64 6.2E-69 530.3 46.8 494 24-539 38-596 (614)
84 PRK13383 acyl-CoA synthetase; 100.0 1.1E-63 2.3E-68 517.1 49.6 480 24-534 34-515 (516)
85 PRK10252 entF enterobactin syn 100.0 2.1E-64 4.5E-69 576.7 48.7 488 25-536 458-964 (1296)
86 PRK12316 peptide synthase; Pro 100.0 7.6E-65 1.7E-69 626.9 48.1 497 19-537 1997-2502(5163)
87 PRK12467 peptide synthase; Pro 100.0 1.7E-64 3.6E-69 614.7 48.2 498 19-537 1568-2083(3956)
88 PRK12316 peptide synthase; Pro 100.0 2.1E-64 4.5E-69 623.1 48.6 491 19-537 505-1004(5163)
89 PLN02479 acetate-CoA ligase 100.0 7.1E-63 1.5E-67 516.0 52.0 507 23-540 18-559 (567)
90 PRK04813 D-alanine--poly(phosp 100.0 6.6E-63 1.4E-67 511.1 51.1 491 25-538 2-502 (503)
91 PTZ00216 acyl-CoA synthetase; 100.0 1.8E-63 3.9E-68 529.7 46.3 503 23-539 67-691 (700)
92 PRK07787 acyl-CoA synthetase; 100.0 5.1E-63 1.1E-67 506.1 46.0 457 35-535 10-469 (471)
93 PLN02430 long-chain-fatty-acid 100.0 5E-63 1.1E-67 521.7 46.5 507 22-539 39-646 (660)
94 PRK07798 acyl-CoA synthetase; 100.0 5.8E-62 1.2E-66 507.9 53.9 501 25-539 3-532 (533)
95 PRK13391 acyl-CoA synthetase; 100.0 2.9E-62 6.2E-67 506.1 51.2 496 31-540 3-510 (511)
96 KOG1175 Acyl-CoA synthetase [L 100.0 2.1E-63 4.5E-68 491.0 40.4 508 25-541 63-604 (626)
97 PRK08162 acyl-CoA synthetase; 100.0 7E-62 1.5E-66 507.5 53.9 506 25-541 18-541 (545)
98 PRK07868 acyl-CoA synthetase; 100.0 1.9E-62 4E-67 536.5 51.1 487 22-538 444-957 (994)
99 PRK05691 peptide synthase; Val 100.0 2.8E-63 6E-68 609.3 46.6 496 18-536 3713-4225(4334)
100 PRK09192 acyl-CoA synthetase; 100.0 5E-62 1.1E-66 510.9 47.4 509 18-543 14-570 (579)
101 COG1022 FAA1 Long-chain acyl-C 100.0 1.7E-62 3.7E-67 490.9 41.4 491 21-539 12-601 (613)
102 PRK08276 long-chain-fatty-acid 100.0 2.3E-61 4.9E-66 498.7 50.6 487 43-541 2-498 (502)
103 PRK12406 long-chain-fatty-acid 100.0 3.3E-61 7.1E-66 498.2 51.4 485 43-543 4-507 (509)
104 PRK12582 acyl-CoA synthetase; 100.0 4E-62 8.7E-67 515.0 44.4 502 17-539 41-607 (624)
105 PRK07445 O-succinylbenzoic aci 100.0 4.8E-62 1E-66 493.1 42.9 428 52-539 19-447 (452)
106 PRK06814 acylglycerophosphoeth 100.0 2.7E-61 5.8E-66 543.6 53.1 495 24-540 630-1133(1140)
107 PRK05691 peptide synthase; Val 100.0 5.8E-62 1.3E-66 597.7 49.8 488 22-536 1128-1625(4334)
108 PRK09029 O-succinylbenzoic aci 100.0 4.6E-61 1E-65 490.2 45.8 453 26-542 3-456 (458)
109 KOG1256 Long-chain acyl-CoA sy 100.0 6.6E-61 1.4E-65 471.5 44.5 507 21-539 71-680 (691)
110 PRK05850 acyl-CoA synthetase; 100.0 1.3E-60 2.8E-65 501.1 48.0 502 25-543 1-572 (578)
111 PLN03051 acyl-activating enzym 100.0 2.5E-60 5.4E-65 488.7 43.4 445 84-539 1-491 (499)
112 KOG1179 Very long-chain acyl-C 100.0 1.1E-59 2.4E-64 443.8 41.7 499 24-536 76-610 (649)
113 TIGR01923 menE O-succinylbenzo 100.0 7.8E-59 1.7E-63 471.6 42.9 436 54-533 1-436 (436)
114 PRK07768 long-chain-fatty-acid 100.0 3.8E-58 8.3E-63 479.2 46.5 493 26-538 3-544 (545)
115 PRK08308 acyl-CoA synthetase; 100.0 1.5E-57 3.3E-62 457.5 45.3 407 44-534 2-408 (414)
116 KOG1180 Acyl-CoA synthetase [L 100.0 1E-57 2.2E-62 428.6 33.7 511 16-539 32-669 (678)
117 PF00501 AMP-binding: AMP-bind 100.0 4.9E-57 1.1E-61 455.7 30.9 402 31-444 1-417 (417)
118 TIGR01733 AA-adenyl-dom amino 100.0 2.3E-51 4.9E-56 413.4 36.2 395 54-468 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 2.3E-46 5E-51 369.1 35.5 321 179-539 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 1.3E-44 2.8E-49 395.4 44.3 469 22-539 424-995 (1452)
121 COG1020 EntF Non-ribosomal pep 100.0 7.9E-40 1.7E-44 347.9 37.7 417 18-461 220-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2.5E-38 5.4E-43 309.5 28.6 288 182-529 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 8.4E-38 1.8E-42 314.2 27.7 328 179-531 72-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 7.9E-31 1.7E-35 264.1 38.4 505 25-543 770-1355(1363)
125 KOG1178 Non-ribosomal peptide 100.0 1.3E-31 2.9E-36 278.6 23.9 494 26-535 37-575 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 5E-31 1.1E-35 264.9 27.2 329 179-530 83-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 2.4E-29 5.1E-34 238.8 26.1 327 178-530 86-430 (438)
128 TIGR03089 conserved hypothetic 99.9 4.6E-26 1E-30 206.4 21.7 211 31-277 2-227 (227)
129 PRK09188 serine/threonine prot 99.9 1E-20 2.2E-25 181.1 14.7 117 413-538 207-327 (365)
130 KOG3628 Predicted AMP-binding 99.8 9E-20 1.9E-24 185.1 21.1 493 25-543 94-708 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 9E-18 1.9E-22 164.8 24.2 245 184-470 101-365 (430)
132 PF04443 LuxE: Acyl-protein sy 99.4 2E-11 4.2E-16 117.5 18.8 240 179-447 86-357 (365)
133 PF13193 AMP-binding_C: AMP-bi 99.3 5.9E-12 1.3E-16 91.9 6.5 70 452-527 1-73 (73)
134 PF03321 GH3: GH3 auxin-respon 98.8 1.9E-08 4.2E-13 102.7 8.5 179 300-505 266-467 (528)
135 PLN02249 indole-3-acetic acid- 98.3 0.00019 4.2E-09 73.9 23.3 135 300-459 301-456 (597)
136 PLN02620 indole-3-acetic acid- 97.9 0.0039 8.4E-08 63.9 22.4 138 300-460 303-470 (612)
137 PLN02247 indole-3-acetic acid- 97.9 0.0028 6.1E-08 65.0 21.4 138 300-460 292-464 (606)
138 PF14535 AMP-binding_C_2: AMP- 97.6 0.00039 8.4E-09 53.4 7.4 83 445-530 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 95.8 0.094 2E-06 51.5 10.8 92 52-144 109-202 (438)
140 TIGR03335 F390_ftsA coenzyme F 90.6 5 0.00011 40.8 13.1 82 51-135 104-187 (445)
141 TIGR02155 PA_CoA_ligase phenyl 89.6 3.5 7.6E-05 41.5 11.1 89 51-140 93-183 (422)
142 KOG1177 Long chain fatty acid 79.9 9.4 0.0002 38.0 8.1 109 199-310 75-198 (596)
143 PRK07656 long-chain-fatty-acid 76.0 23 0.00051 36.5 10.7 85 51-139 184-270 (513)
144 COG0399 WecE Predicted pyridox 75.6 33 0.00072 33.6 10.6 85 62-150 59-153 (374)
145 PLN02736 long-chain acyl-CoA s 74.9 29 0.00063 37.3 11.4 103 200-309 77-180 (651)
146 TIGR03089 conserved hypothetic 73.5 22 0.00047 32.3 8.5 54 70-125 171-226 (227)
147 PF00501 AMP-binding: AMP-bind 72.7 15 0.00032 36.7 8.1 91 180-281 8-99 (417)
148 PRK06187 long-chain-fatty-acid 72.5 44 0.00094 34.5 11.8 85 51-139 185-270 (521)
149 TIGR01733 AA-adenyl-dom amino 72.5 94 0.002 30.7 13.8 113 39-154 119-243 (408)
150 PRK08315 AMP-binding domain pr 72.0 41 0.00089 35.3 11.5 83 51-136 217-301 (559)
151 KOG0023 Alcohol dehydrogenase, 71.5 36 0.00079 32.2 9.2 74 68-144 173-246 (360)
152 PRK12583 acyl-CoA synthetase; 70.6 54 0.0012 34.3 12.0 82 51-135 219-302 (558)
153 TIGR03590 PseG pseudaminic aci 70.5 82 0.0018 29.6 11.9 101 50-157 9-114 (279)
154 PRK06334 long chain fatty acid 69.2 62 0.0014 33.8 12.0 101 37-140 180-289 (539)
155 PRK09274 peptide synthase; Pro 68.0 29 0.00062 36.4 9.3 101 180-283 19-121 (552)
156 PF01041 DegT_DnrJ_EryC1: DegT 68.0 36 0.00078 33.5 9.4 85 62-150 50-144 (363)
157 PLN03052 acetate--CoA ligase; 67.8 28 0.00062 38.0 9.3 101 180-284 188-289 (728)
158 TIGR01923 menE O-succinylbenzo 65.4 41 0.00089 33.8 9.5 82 51-138 129-211 (436)
159 PLN03051 acyl-activating enzym 65.1 60 0.0013 33.5 10.8 97 39-138 118-222 (499)
160 PTZ00342 acyl-CoA synthetase; 64.6 68 0.0015 35.1 11.3 121 180-310 74-208 (746)
161 PTZ00237 acetyl-CoA synthetase 64.2 33 0.00072 36.9 8.9 97 181-283 75-172 (647)
162 PRK04319 acetyl-CoA synthetase 63.5 72 0.0016 33.6 11.2 99 38-139 203-310 (570)
163 PRK06839 acyl-CoA synthetase; 63.4 54 0.0012 33.6 10.2 99 180-289 15-114 (496)
164 PLN02387 long-chain-fatty-acid 63.3 42 0.0009 36.5 9.5 105 199-310 104-209 (696)
165 TIGR02379 ECA_wecE TDP-4-keto- 62.7 88 0.0019 30.9 10.9 77 68-148 62-148 (376)
166 PLN02654 acetate-CoA ligase 62.4 37 0.0008 36.7 8.9 98 181-284 103-201 (666)
167 PLN02565 cysteine synthase 62.4 94 0.002 30.0 10.7 91 41-133 31-122 (322)
168 PRK07529 AMP-binding domain pr 61.5 34 0.00074 36.6 8.4 98 180-282 38-136 (632)
169 PLN02614 long-chain acyl-CoA s 61.1 61 0.0013 35.0 10.3 86 201-289 79-165 (666)
170 TIGR02188 Ac_CoA_lig_AcsA acet 61.1 38 0.00082 36.2 8.7 98 180-283 70-168 (625)
171 TIGR03098 ligase_PEP_1 acyl-Co 60.1 70 0.0015 33.0 10.4 85 51-139 179-264 (515)
172 PRK11761 cysM cysteine synthas 58.8 1E+02 0.0023 29.2 10.3 89 41-132 28-117 (296)
173 PLN03102 acyl-activating enzym 58.4 34 0.00074 36.2 7.7 84 201-287 39-123 (579)
174 PRK00174 acetyl-CoA synthetase 58.4 47 0.001 35.6 8.9 98 180-283 80-178 (637)
175 TIGR02316 propion_prpE propion 57.9 52 0.0011 35.2 9.1 98 180-283 65-163 (628)
176 PLN02574 4-coumarate--CoA liga 57.9 64 0.0014 33.9 9.6 101 180-289 52-153 (560)
177 PLN02860 o-succinylbenzoate-Co 57.8 1.3E+02 0.0028 31.7 11.9 99 38-140 170-276 (563)
178 PRK07788 acyl-CoA synthetase; 57.5 41 0.00089 35.2 8.1 86 201-289 74-160 (549)
179 PLN02246 4-coumarate--CoA liga 57.3 55 0.0012 34.1 9.0 99 180-288 36-135 (537)
180 PRK03584 acetoacetyl-CoA synth 57.1 48 0.001 35.7 8.7 96 181-283 98-194 (655)
181 PRK05857 acyl-CoA synthetase; 55.9 54 0.0012 34.3 8.6 96 180-285 27-123 (540)
182 PRK03640 O-succinylbenzoic aci 55.8 1.1E+02 0.0024 31.1 10.9 85 51-139 159-244 (483)
183 PRK05677 long-chain-fatty-acid 54.9 68 0.0015 33.7 9.3 84 201-286 49-133 (562)
184 cd01445 TST_Repeats Thiosulfat 54.9 32 0.0007 28.3 5.4 41 63-103 81-124 (138)
185 PLN02556 cysteine synthase/L-3 54.8 1.2E+02 0.0026 29.9 10.2 62 71-132 103-165 (368)
186 PLN02330 4-coumarate--CoA liga 54.8 54 0.0012 34.3 8.5 98 180-287 41-139 (546)
187 PRK08316 acyl-CoA synthetase; 54.3 70 0.0015 33.1 9.2 87 200-289 35-122 (523)
188 PRK10696 tRNA 2-thiocytidine b 53.8 1.3E+02 0.0029 27.8 9.9 70 61-130 12-93 (258)
189 PRK08008 caiC putative crotono 53.4 89 0.0019 32.3 9.8 101 180-287 20-121 (517)
190 COG1064 AdhP Zn-dependent alco 53.4 55 0.0012 31.6 7.3 60 69-132 159-218 (339)
191 PRK13295 cyclohexanecarboxylat 53.1 66 0.0014 33.6 8.8 98 180-283 37-135 (547)
192 PRK06155 crotonobetaine/carnit 52.6 62 0.0013 33.9 8.4 87 201-290 46-133 (542)
193 PRK06164 acyl-CoA synthetase; 52.3 1.4E+02 0.0031 31.0 11.2 98 38-139 179-284 (540)
194 PRK13388 acyl-CoA synthetase; 52.2 79 0.0017 33.0 9.2 84 201-287 26-111 (540)
195 PRK06188 acyl-CoA synthetase; 51.7 1.9E+02 0.004 30.0 11.8 85 51-139 186-270 (524)
196 PRK08308 acyl-CoA synthetase; 51.7 1.9E+02 0.0042 28.8 11.6 98 38-139 99-205 (414)
197 PLN02861 long-chain-fatty-acid 51.5 63 0.0014 34.8 8.5 87 200-289 76-163 (660)
198 PRK07514 malonyl-CoA synthase; 51.5 88 0.0019 32.2 9.3 86 200-288 27-113 (504)
199 PRK07638 acyl-CoA synthetase; 51.4 1.9E+02 0.004 29.6 11.7 85 51-139 161-246 (487)
200 COG0031 CysK Cysteine synthase 51.2 2.1E+02 0.0046 27.1 10.5 60 72-132 56-116 (300)
201 PLN02430 long-chain-fatty-acid 50.8 1.7E+02 0.0037 31.6 11.6 87 201-290 76-163 (660)
202 KOG1176 Acyl-CoA synthetase [L 50.5 47 0.001 34.6 6.8 92 199-292 43-136 (537)
203 PRK07798 acyl-CoA synthetase; 50.4 1E+02 0.0022 31.9 9.7 86 201-289 28-114 (533)
204 TIGR01139 cysK cysteine syntha 50.3 1.3E+02 0.0027 28.6 9.4 67 67-134 46-113 (298)
205 PRK08043 bifunctional acyl-[ac 50.2 1.6E+02 0.0035 32.1 11.4 94 38-134 363-465 (718)
206 TIGR02262 benz_CoA_lig benzoat 50.2 1.7E+02 0.0036 30.2 11.2 97 38-136 159-264 (508)
207 PF02729 OTCace_N: Aspartate/o 49.8 1.5E+02 0.0032 24.5 11.1 97 57-154 16-124 (142)
208 PRK13391 acyl-CoA synthetase; 49.7 1.1E+02 0.0024 31.6 9.8 97 180-286 10-107 (511)
209 TIGR01217 ac_ac_CoA_syn acetoa 49.6 48 0.001 35.7 7.1 81 200-283 113-194 (652)
210 PRK05605 long-chain-fatty-acid 49.2 66 0.0014 33.9 8.1 98 180-289 45-143 (573)
211 COG0365 Acs Acyl-coenzyme A sy 49.1 51 0.0011 34.1 6.8 85 200-287 39-124 (528)
212 PRK05850 acyl-CoA synthetase; 49.0 1E+02 0.0023 32.4 9.6 104 180-289 14-123 (578)
213 PRK13383 acyl-CoA synthetase; 48.7 72 0.0016 33.0 8.2 86 201-289 60-146 (516)
214 PRK08314 long-chain-fatty-acid 48.6 59 0.0013 33.9 7.6 87 201-289 35-122 (546)
215 PRK09088 acyl-CoA synthetase; 47.4 97 0.0021 31.7 8.8 94 180-283 8-102 (488)
216 PRK05620 long-chain-fatty-acid 46.9 97 0.0021 32.7 8.9 103 179-289 22-125 (576)
217 PLN03013 cysteine synthase 46.8 1.3E+02 0.0027 30.4 8.9 81 51-133 149-230 (429)
218 COG0318 CaiC Acyl-CoA syntheta 46.8 2E+02 0.0043 30.1 11.0 100 38-138 169-278 (534)
219 PRK11706 TDP-4-oxo-6-deoxy-D-g 46.4 98 0.0021 30.5 8.3 58 70-131 64-126 (375)
220 PF01297 TroA: Periplasmic sol 46.0 99 0.0021 28.5 7.8 99 54-155 126-231 (256)
221 PRK11658 UDP-4-amino-4-deoxy-L 45.5 2.6E+02 0.0056 27.6 11.1 63 63-129 59-126 (379)
222 PRK08279 long-chain-acyl-CoA s 45.1 2.2E+02 0.0049 30.1 11.4 82 51-136 217-300 (600)
223 PLN00011 cysteine synthase 45.0 1.6E+02 0.0035 28.4 9.3 67 66-133 56-124 (323)
224 TIGR03443 alpha_am_amid L-amin 44.8 86 0.0019 37.4 8.9 100 179-281 248-348 (1389)
225 COG1022 FAA1 Long-chain acyl-C 44.6 2.3E+02 0.0049 30.2 10.7 102 36-142 187-297 (613)
226 PRK12476 putative fatty-acid-- 44.1 1.6E+02 0.0035 31.3 10.1 103 180-288 47-155 (612)
227 TIGR01734 D-ala-DACP-lig D-ala 43.8 2.8E+02 0.0061 28.4 11.7 85 51-138 159-246 (502)
228 TIGR01136 cysKM cysteine synth 43.8 1.7E+02 0.0037 27.8 9.2 90 41-133 23-113 (299)
229 PRK10946 entE enterobactin syn 43.7 3.5E+02 0.0076 28.1 12.4 85 51-139 200-287 (536)
230 COG1167 ARO8 Transcriptional r 43.7 3.7E+02 0.0081 27.4 14.1 59 75-134 177-236 (459)
231 TIGR01138 cysM cysteine syntha 42.8 1.9E+02 0.0042 27.3 9.3 64 68-132 49-113 (290)
232 TIGR02372 4_coum_CoA_lig 4-cou 42.7 3.5E+02 0.0076 26.8 12.2 108 25-138 80-198 (386)
233 TIGR03588 PseC UDP-4-keto-6-de 42.6 2.6E+02 0.0056 27.6 10.7 66 63-131 55-128 (380)
234 PRK10524 prpE propionyl-CoA sy 42.6 70 0.0015 34.2 7.1 98 180-283 66-164 (629)
235 PRK08751 putative long-chain f 42.5 76 0.0017 33.3 7.3 97 180-287 38-135 (560)
236 PRK07787 acyl-CoA synthetase; 42.4 3E+02 0.0065 28.0 11.5 83 51-138 146-230 (471)
237 PRK06087 short chain acyl-CoA 42.4 1.1E+02 0.0024 32.0 8.4 79 201-282 49-128 (547)
238 COG1021 EntE Peptide arylation 42.1 3E+02 0.0066 27.3 10.1 104 202-315 54-166 (542)
239 TIGR02618 tyr_phenol_ly tyrosi 41.6 3.9E+02 0.0086 27.1 11.6 95 51-150 69-208 (450)
240 PRK13237 tyrosine phenol-lyase 41.5 4E+02 0.0087 27.2 11.6 95 51-150 76-215 (460)
241 PLN02550 threonine dehydratase 41.0 2.3E+02 0.0051 29.9 10.1 91 41-136 125-215 (591)
242 PRK06381 threonine synthase; V 40.9 1E+02 0.0023 29.6 7.3 89 41-135 32-120 (319)
243 PRK08162 acyl-CoA synthetase; 40.7 86 0.0019 32.7 7.3 86 201-289 43-129 (545)
244 PRK07059 Long-chain-fatty-acid 40.4 99 0.0021 32.4 7.8 85 200-287 47-132 (557)
245 PRK10717 cysteine synthase A; 40.3 1.9E+02 0.004 28.0 9.0 64 69-133 55-119 (330)
246 cd06448 L-Ser-dehyd Serine deh 40.0 1.2E+02 0.0027 29.1 7.6 90 41-133 17-106 (316)
247 PRK06702 O-acetylhomoserine am 39.9 3E+02 0.0064 27.9 10.5 48 84-131 82-132 (432)
248 PRK07470 acyl-CoA synthetase; 39.7 3.1E+02 0.0068 28.3 11.3 101 38-139 161-269 (528)
249 PRK08633 2-acyl-glycerophospho 39.6 2.5E+02 0.0055 32.6 11.6 99 37-138 779-886 (1146)
250 PRK05852 acyl-CoA synthetase; 39.2 4E+02 0.0087 27.6 12.0 87 51-140 194-283 (534)
251 PRK07769 long-chain-fatty-acid 39.1 2.3E+02 0.0049 30.4 10.3 102 180-287 34-141 (631)
252 TIGR02275 DHB_AMP_lig 2,3-dihy 38.5 3.5E+02 0.0075 28.0 11.4 98 38-139 181-288 (527)
253 PRK12406 long-chain-fatty-acid 38.5 1.1E+02 0.0023 31.6 7.6 86 201-289 11-97 (509)
254 PRK07476 eutB threonine dehydr 38.2 2.2E+02 0.0049 27.3 9.1 52 84-135 73-124 (322)
255 PRK12492 long-chain-fatty-acid 38.0 88 0.0019 32.9 6.9 82 201-284 49-131 (562)
256 PLN02479 acetate-CoA ligase 38.0 1.3E+02 0.0029 31.6 8.2 95 180-286 33-128 (567)
257 cd00640 Trp-synth-beta_II Tryp 37.8 3.2E+02 0.0068 24.9 10.4 67 68-135 41-107 (244)
258 PRK15407 lipopolysaccharide bi 37.6 3.1E+02 0.0068 27.8 10.4 55 73-131 107-166 (438)
259 PRK11493 sseA 3-mercaptopyruva 37.1 52 0.0011 31.0 4.5 53 51-103 200-257 (281)
260 PF00403 HMA: Heavy-metal-asso 37.1 1.2E+02 0.0026 20.4 5.3 46 450-503 13-58 (62)
261 TIGR03208 cyc_hxne_CoA_lg cycl 37.1 1.7E+02 0.0037 30.5 8.8 81 200-283 52-133 (538)
262 PRK13390 acyl-CoA synthetase; 37.0 2E+02 0.0043 29.6 9.2 94 180-283 10-104 (501)
263 PRK07867 acyl-CoA synthetase; 36.9 1.3E+02 0.0028 31.4 7.8 86 201-288 28-114 (529)
264 PRK08276 long-chain-fatty-acid 36.8 1.4E+02 0.003 30.7 8.1 86 201-289 11-97 (502)
265 PRK02261 methylaspartate mutas 36.8 2.4E+02 0.0051 23.2 8.9 46 236-281 14-60 (137)
266 cd01519 RHOD_HSP67B2 Member of 36.7 72 0.0016 24.4 4.6 53 51-103 36-92 (106)
267 PRK06382 threonine dehydratase 36.7 2.2E+02 0.0047 28.5 9.0 55 82-136 77-131 (406)
268 cd01449 TST_Repeat_2 Thiosulfa 36.4 65 0.0014 25.3 4.4 41 63-103 64-104 (118)
269 PTZ00216 acyl-CoA synthetase; 36.3 1.3E+02 0.0029 32.7 8.0 88 199-289 119-207 (700)
270 KOG1250 Threonine/serine dehyd 36.0 4.4E+02 0.0096 26.1 11.8 54 82-135 118-171 (457)
271 PRK06178 acyl-CoA synthetase; 35.8 1.4E+02 0.0029 31.5 7.9 87 201-290 58-145 (567)
272 PRK06814 acylglycerophosphoeth 35.7 3.6E+02 0.0079 31.3 12.0 98 38-138 791-897 (1140)
273 cd07050 BMC_EutL_repeat2 ethan 35.7 58 0.0013 23.5 3.3 40 66-105 3-43 (87)
274 PRK13382 acyl-CoA synthetase; 35.5 1.6E+02 0.0034 30.8 8.3 95 180-286 56-151 (537)
275 TIGR01137 cysta_beta cystathio 35.3 2.2E+02 0.0048 28.9 9.1 89 41-132 27-116 (454)
276 PTZ00297 pantothenate kinase; 35.2 2E+02 0.0044 34.2 9.5 101 200-310 456-556 (1452)
277 COG1167 ARO8 Transcriptional r 35.1 1.1E+02 0.0023 31.4 6.6 57 224-285 176-236 (459)
278 PRK05939 hypothetical protein; 35.0 4.2E+02 0.0091 26.4 10.7 55 74-130 83-137 (397)
279 TIGR03531 selenium_SpcS O-phos 34.6 5.1E+02 0.011 26.4 11.1 52 68-122 140-200 (444)
280 PRK10252 entF enterobactin syn 34.5 3.7E+02 0.0079 31.9 11.9 100 38-140 596-705 (1296)
281 PRK12582 acyl-CoA synthetase; 34.2 99 0.0022 33.0 6.6 80 200-282 79-164 (624)
282 TIGR00715 precor6x_red precorr 34.1 2.3E+02 0.005 26.3 8.0 76 77-156 150-233 (256)
283 KOG3212 Uncharacterized conser 33.8 61 0.0013 27.8 3.7 87 9-95 53-149 (208)
284 PF11142 DUF2917: Protein of u 33.2 1.6E+02 0.0036 20.3 5.3 34 387-435 25-58 (63)
285 PRK06060 acyl-CoA synthetase; 33.1 1.5E+02 0.0033 32.2 7.9 82 201-285 30-112 (705)
286 TIGR02898 spore_YhcN_YlaJ spor 33.0 2.3E+02 0.005 24.0 7.1 53 450-507 56-109 (158)
287 cd01561 CBS_like CBS_like: Thi 32.9 4.2E+02 0.0092 24.9 10.3 65 69-134 44-109 (291)
288 TIGR02370 pyl_corrinoid methyl 32.9 3.1E+02 0.0066 24.2 8.4 91 229-321 88-185 (197)
289 PRK08974 long-chain-fatty-acid 32.4 1.3E+02 0.0028 31.5 7.1 83 201-285 48-131 (560)
290 PRK07008 long-chain-fatty-acid 32.1 1.5E+02 0.0033 30.8 7.5 84 201-287 39-123 (539)
291 PF00455 DeoRC: DeoR C termina 31.5 2.5E+02 0.0054 23.8 7.3 85 249-341 16-108 (161)
292 PRK07786 long-chain-fatty-acid 31.5 1.8E+02 0.0038 30.4 7.9 83 201-286 42-125 (542)
293 KOG1179 Very long-chain acyl-C 31.5 1.8E+02 0.004 30.1 7.2 76 53-133 262-340 (649)
294 cd02070 corrinoid_protein_B12- 31.0 3.7E+02 0.008 23.7 9.0 95 225-321 81-183 (201)
295 PRK06018 putative acyl-CoA syn 30.9 1.3E+02 0.0029 31.3 6.8 83 201-286 39-122 (542)
296 PRK09162 hypoxanthine-guanine 30.6 1.4E+02 0.003 25.9 5.7 47 50-97 14-60 (181)
297 PF07994 NAD_binding_5: Myo-in 30.6 4.8E+02 0.01 24.8 9.7 76 54-133 127-232 (295)
298 cd01019 ZnuA Zinc binding prot 30.6 3.2E+02 0.007 25.7 8.7 97 55-153 156-258 (286)
299 PRK08813 threonine dehydratase 30.0 4.6E+02 0.01 25.6 9.7 83 50-137 58-140 (349)
300 PRK14807 histidinol-phosphate 29.9 5.2E+02 0.011 25.0 10.9 32 97-130 96-127 (351)
301 TIGR03772 anch_rpt_subst ancho 29.7 3.6E+02 0.0078 27.7 9.2 73 78-152 371-451 (479)
302 PRK08180 feruloyl-CoA synthase 29.5 1.3E+02 0.0029 32.0 6.6 96 180-282 52-153 (614)
303 PF01175 Urocanase: Urocanase; 29.3 4.3E+02 0.0093 27.1 9.2 188 29-292 26-218 (546)
304 PLN02356 phosphateglycerate ki 29.3 3E+02 0.0066 27.7 8.4 67 65-132 91-158 (423)
305 PF09580 Spore_YhcN_YlaJ: Spor 29.0 1.5E+02 0.0032 25.5 5.7 53 449-507 76-128 (177)
306 PF03808 Glyco_tran_WecB: Glyc 28.9 1.1E+02 0.0024 26.2 4.8 78 252-335 4-82 (172)
307 COG2236 Predicted phosphoribos 28.8 97 0.0021 27.2 4.3 34 51-84 5-38 (192)
308 PRK09192 acyl-CoA synthetase; 28.6 2.3E+02 0.0049 29.9 8.1 87 200-289 48-142 (579)
309 TIGR03595 Obg_CgtA_exten Obg f 28.3 63 0.0014 22.8 2.6 19 65-83 45-63 (69)
310 PRK04813 D-alanine--poly(phosp 28.0 6.6E+02 0.014 25.6 12.0 84 51-137 161-247 (503)
311 PLN02723 3-mercaptopyruvate su 27.9 92 0.002 30.0 4.6 52 52-103 238-295 (320)
312 PRK09545 znuA high-affinity zi 27.3 3.8E+02 0.0083 25.6 8.6 97 55-153 180-282 (311)
313 cd00615 Orn_deC_like Ornithine 27.2 5.3E+02 0.011 24.2 10.5 55 74-131 96-161 (294)
314 PRK06710 long-chain-fatty-acid 27.2 1.6E+02 0.0035 30.8 6.7 82 201-285 49-131 (563)
315 PRK05638 threonine synthase; V 27.1 2.3E+02 0.005 28.8 7.4 91 41-137 81-171 (442)
316 PRK11823 DNA repair protein Ra 26.8 4.8E+02 0.01 26.5 9.6 82 72-153 75-163 (446)
317 smart00467 GS GS motif. Aa app 26.8 33 0.00072 19.6 0.7 14 190-203 11-25 (30)
318 PRK12483 threonine dehydratase 26.4 4.1E+02 0.0088 27.7 9.1 57 81-137 88-144 (521)
319 PRK08246 threonine dehydratase 26.3 5.2E+02 0.011 24.7 9.4 59 76-135 67-125 (310)
320 PRK07768 long-chain-fatty-acid 26.2 5.7E+02 0.012 26.5 10.6 93 38-133 150-255 (545)
321 PRK05414 urocanate hydratase; 25.9 7.4E+02 0.016 25.5 10.9 32 226-259 165-196 (556)
322 cd01448 TST_Repeat_1 Thiosulfa 25.8 2.1E+02 0.0045 22.5 5.7 41 63-103 65-106 (122)
323 cd01017 AdcA Metal binding pro 25.7 3.6E+02 0.0078 25.3 8.1 74 77-153 171-250 (282)
324 TIGR03366 HpnZ_proposed putati 25.6 3.7E+02 0.0081 25.0 8.3 60 68-131 112-172 (280)
325 TIGR00936 ahcY adenosylhomocys 25.6 6.9E+02 0.015 25.0 10.5 58 74-131 29-88 (406)
326 PRK10595 SOS cell division inh 25.5 3.5E+02 0.0077 23.0 6.9 37 66-102 70-106 (164)
327 PF06543 Lac_bphage_repr: Lact 25.4 55 0.0012 20.9 1.6 22 304-325 22-43 (49)
328 KOG0633 Histidinol phosphate a 25.4 1.4E+02 0.0031 27.4 4.8 68 66-133 99-169 (375)
329 PRK09224 threonine dehydratase 25.2 5.5E+02 0.012 26.6 9.9 91 41-136 36-126 (504)
330 PF09269 DUF1967: Domain of un 25.0 68 0.0015 22.6 2.3 22 61-82 41-62 (69)
331 PRK10411 DNA-binding transcrip 25.0 2.9E+02 0.0064 25.2 7.1 83 253-343 94-183 (240)
332 TIGR01124 ilvA_2Cterm threonin 25.0 4.4E+02 0.0096 27.3 9.0 90 41-135 33-122 (499)
333 TIGR01228 hutU urocanate hydra 24.9 7.6E+02 0.017 25.3 11.2 31 227-259 157-187 (545)
334 TIGR01127 ilvA_1Cterm threonin 24.9 4E+02 0.0087 26.3 8.6 56 81-136 51-106 (380)
335 PRK06721 threonine synthase; R 24.8 3.2E+02 0.0068 26.8 7.7 58 78-136 76-134 (352)
336 PRK05851 long-chain-fatty-acid 24.7 7.8E+02 0.017 25.4 11.3 90 38-130 150-251 (525)
337 cd01563 Thr-synth_1 Threonine 24.6 2.9E+02 0.0062 26.6 7.4 89 41-135 39-127 (324)
338 cd01562 Thr-dehyd Threonine de 24.5 3.6E+02 0.0079 25.5 8.0 58 77-135 65-122 (304)
339 PRK08574 cystathionine gamma-s 23.9 7.2E+02 0.016 24.6 10.4 10 54-63 54-63 (385)
340 PRK06145 acyl-CoA synthetase; 23.9 7.8E+02 0.017 25.0 11.4 84 51-138 167-252 (497)
341 PF08479 POTRA_2: POTRA domain 23.7 1.1E+02 0.0025 21.8 3.4 25 50-74 28-52 (76)
342 smart00450 RHOD Rhodanese Homo 23.6 2.3E+02 0.005 20.7 5.4 40 64-103 43-82 (100)
343 COG2885 OmpA Outer membrane pr 23.5 1.3E+02 0.0029 26.2 4.4 59 25-84 99-161 (190)
344 PF08515 TGF_beta_GS: Transfor 23.5 39 0.00084 19.1 0.6 15 189-203 11-26 (29)
345 cd01018 ZntC Metal binding pro 23.4 6E+02 0.013 23.5 10.4 96 54-153 146-247 (266)
346 PRK08638 threonine dehydratase 23.1 5.2E+02 0.011 25.1 8.7 56 82-137 79-134 (333)
347 PRK09029 O-succinylbenzoic aci 23.1 2.6E+02 0.0057 28.2 7.2 79 201-282 28-107 (458)
348 PRK03515 ornithine carbamoyltr 22.8 7.1E+02 0.015 24.2 11.6 75 76-151 44-127 (336)
349 PRK07868 acyl-CoA synthetase; 22.7 2.8E+02 0.0061 31.7 7.9 84 201-289 472-555 (994)
350 cd06447 D-Ser-dehyd D-Serine d 22.4 3.8E+02 0.0082 26.8 7.7 58 80-137 136-193 (404)
351 PRK10287 thiosulfate:cyanide s 22.0 2.9E+02 0.0064 21.3 5.5 50 51-107 41-90 (104)
352 PRK08526 threonine dehydratase 21.9 4.7E+02 0.01 26.2 8.4 56 82-137 72-127 (403)
353 TIGR02035 D_Ser_am_lyase D-ser 21.9 3.7E+02 0.0081 27.2 7.6 59 80-138 154-212 (431)
354 PF01053 Cys_Met_Meta_PP: Cys/ 21.7 3.4E+02 0.0075 26.9 7.3 87 77-165 70-162 (386)
355 COG2897 SseA Rhodanese-related 21.6 1.8E+02 0.0039 27.4 4.9 55 51-105 202-262 (285)
356 cd01524 RHOD_Pyr_redox Member 21.5 3.1E+02 0.0068 20.0 5.6 50 51-109 34-83 (90)
357 TIGR02991 ectoine_eutB ectoine 21.5 6.4E+02 0.014 24.2 9.0 53 83-135 72-124 (317)
358 TIGR03205 pimA dicarboxylate-- 21.2 2.7E+02 0.0059 28.9 7.0 79 201-282 46-125 (541)
359 PRK07409 threonine synthase; V 21.0 3.8E+02 0.0083 26.2 7.5 90 41-136 47-137 (353)
360 PRK11493 sseA 3-mercaptopyruva 20.9 2.4E+02 0.0053 26.4 5.9 49 61-109 71-121 (281)
361 PLN02238 hypoxanthine phosphor 20.8 2.4E+02 0.0052 24.7 5.4 22 51-72 10-31 (189)
362 KOG1252 Cystathionine beta-syn 20.8 7.6E+02 0.017 23.9 8.7 61 73-133 99-159 (362)
363 PF00291 PALP: Pyridoxal-phosp 20.4 5.6E+02 0.012 24.1 8.5 57 76-133 55-111 (306)
364 cd06451 AGAT_like Alanine-glyo 20.4 7.8E+02 0.017 23.7 11.4 13 448-460 339-351 (356)
365 PRK07671 cystathionine beta-ly 20.2 7.5E+02 0.016 24.4 9.4 72 81-153 68-141 (377)
366 PRK09331 Sep-tRNA:Cys-tRNA syn 20.1 8.4E+02 0.018 24.0 11.3 55 74-131 99-165 (387)
367 KOG1175 Acyl-CoA synthetase [L 20.1 5E+02 0.011 27.7 8.2 97 180-282 78-175 (626)
368 PTZ00393 protein tyrosine phos 20.1 6E+02 0.013 23.3 7.7 60 75-143 168-227 (241)
369 COG0399 WecE Predicted pyridox 20.0 7.7E+02 0.017 24.4 9.1 84 223-331 70-153 (374)
370 cd00754 MoaD Ubiquitin domain 20.0 2.1E+02 0.0045 20.4 4.2 50 20-86 21-77 (80)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-80 Score=615.61 Aligned_cols=500 Identities=42% Similarity=0.696 Sum_probs=439.9
Q ss_pred HHhhhccCCCc-cEEEeCCC-CceeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEee
Q 009077 31 CFENISQFADR-PCIINGPT-GDVYTYADVELTSRKVAAGLSKLG--VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTT 106 (544)
Q Consensus 31 l~~~a~~~p~~-~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~g--~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 106 (544)
+.+.+..++++ +.+++... ++.+||+|+.+++.++|..|.++| +++||+|++++||+++++.+++||+.+|+++.+
T Consensus 22 l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~ 101 (537)
T KOG1176|consen 22 LGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNP 101 (537)
T ss_pred ccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccc
Confidence 34444444444 66665532 599999999999999999999876 899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCC---------cc-HHHHHhhccCCCCCc
Q 009077 107 ANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENC---------LH-FSELITQADENEIPA 176 (544)
Q Consensus 107 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~-~~~~~~~~~~~~~~~ 176 (544)
++|.++..++.+.++.++++++|++....+.+.+.......+++++... ... .. ++.+....... . .
T Consensus 102 ~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 178 (537)
T KOG1176|consen 102 LNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGD-EGVISISDLVEDLDAFEDLMPEGLPD-G-I 178 (537)
T ss_pred cCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecc-cCccccccccccccchhhccccCCCc-c-c
Confidence 9999999999999999999999999999999988776655566555432 111 11 22221111111 1 4
Q ss_pred cCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEE
Q 009077 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (544)
Q Consensus 177 ~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~ 256 (544)
.....++++.++|||||||.||+|.+||+++..+....... ..+...++.++.+|++|.+|+...+.+.+..|+++
T Consensus 179 ~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~----~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~i 254 (537)
T KOG1176|consen 179 RPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIG----WELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTI 254 (537)
T ss_pred ccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhc----ccCCCCceEEEechHHHHhHHHHHHHHHHhCCceE
Confidence 55677999999999999999999999999998886655442 23566899999999999999987777788888888
Q ss_pred EEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccc
Q 009077 257 LIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (544)
Q Consensus 257 v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~ 336 (544)
+....+++..+++.+++|++|++.++|+++..|++.+......+++++.+.+||++++++..+++++.+|...+.+.||+
T Consensus 255 i~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGm 334 (537)
T KOG1176|consen 255 ICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGM 334 (537)
T ss_pred EECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeecc
Confidence 88888999999999999999999999999999999987777889999999999999999999999999977999999999
Q ss_pred cccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCc
Q 009077 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGW 416 (544)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 416 (544)
||++++++.+... +. .+++++|++++++...+.+ +.+..++.++.||||++|+.+..||+++++.|.+.++.+||
T Consensus 335 TE~~~~~~~~~~~---~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW 409 (537)
T KOG1176|consen 335 TEAGGLITSNDWG---PE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGW 409 (537)
T ss_pred ccccCceeecCCC---cc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCc
Confidence 9999777765221 11 5789999999988887777 78999999999999999999999999999999999988899
Q ss_pred eecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHH
Q 009077 417 LHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDE 496 (544)
Q Consensus 417 ~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 496 (544)
|+|||+|++|+||++++.+|+.|+||.+|++|+|.|||++|.+||.|.|++|++++|+..|+.++|+|+..++..+++++
T Consensus 410 ~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~d 489 (537)
T KOG1176|consen 410 FHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKD 489 (537)
T ss_pred cccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhccc
Q 009077 497 IKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDL 542 (544)
Q Consensus 497 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 542 (544)
+.+++++++++|++|..++++++||+|++||++|+.|++++.+...
T Consensus 490 i~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~~ 535 (537)
T KOG1176|consen 490 IIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLGS 535 (537)
T ss_pred HHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999987654
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-78 Score=559.52 Aligned_cols=509 Identities=27% Similarity=0.409 Sum_probs=454.9
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
++.|+++.++..+++.||+.|.+....+.++||+|+.+.++.+|++|.+.|+++||+|++..||+.+|+..+|||+++|.
T Consensus 48 ~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~ 127 (596)
T KOG1177|consen 48 DSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGL 127 (596)
T ss_pred ccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhce
Confidence 45899999999999999999999988888899999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecch-----hHHHHHHHhhc--------------CcEEEEe-C--CCCCCCc
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVY-----NDKVRDLSEHH--------------GARIVTI-D--PPPENCL 160 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~--------------~~~~v~~-~--~~~~~~~ 160 (544)
+.+++||.+...+++..|++.+++++|+.+.+ ...++++..+. ....+++ + .+..+..
T Consensus 128 v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~Ga~ 207 (596)
T KOG1177|consen 128 VLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPGAF 207 (596)
T ss_pred EEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCCce
Confidence 99999999999999999999999999997654 34445544332 1122333 3 2345667
Q ss_pred cHHHHHhhccCCCCC-----ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecc
Q 009077 161 HFSELITQADENEIP-----AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLP 235 (544)
Q Consensus 161 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p 235 (544)
.+++++.....+... .....||+++.|.|||||||.||++.+||.++++++..... .+++...+++++..|
T Consensus 208 ~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~----r~g~~e~~~i~~~~P 283 (596)
T KOG1177|consen 208 LLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGA----RAGYNEKHRICIPNP 283 (596)
T ss_pred ehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHH----HhCcCcceEEEecCc
Confidence 778887666554322 23467899999999999999999999999999998877655 456888889999999
Q ss_pred hhhHHhhHHHHHHHHHhCcEEEEc-cCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCC
Q 009077 236 LFHIYSLNSVLLCALRVGAAILIM-QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMG 314 (544)
Q Consensus 236 ~~~~~g~~~~~~~~l~~g~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~ 314 (544)
++|.+|.....++++..|+++|++ +.+++.+.++.|+++++|.++++|+++..|++.......+++++|.++.+|+++|
T Consensus 284 l~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s 363 (596)
T KOG1177|consen 284 LYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVS 363 (596)
T ss_pred hHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCC
Confidence 999999889999999999999995 5699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecC
Q 009077 315 KELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 394 (544)
+++.+.+.....-..+...||+||++.+.++.. ..++......++|+..++.+..++| +.+..++-|..|||+++|.
T Consensus 364 ~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~--~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY 440 (596)
T KOG1177|consen 364 PELLKLIVNQMNMKDIAVAYGLTETSPVLFMSL--LGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGY 440 (596)
T ss_pred HHHHHHHHHhhCceeeEEEeeccccCcceeeec--CCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEec
Confidence 999999998763334778899999998776642 2344455668899999999999999 7899999999999999999
Q ss_pred cccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCC
Q 009077 395 QIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDE 474 (544)
Q Consensus 395 ~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~ 474 (544)
....|||++++.+.+....+.||+|||++.++++|++++.||++|+|+.+|++|+|.+||+.|.++|.|.++.|++++|+
T Consensus 441 ~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~ 520 (596)
T KOG1177|consen 441 STMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDE 520 (596)
T ss_pred hhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEEecCCCC--CCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 475 AAGEVPVAFVVRSNGSK--ITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 475 ~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
..|+.++|+|.+..+.. ...++|..+++..+..+++|+++++++++|+|-+|||+|-++|++++
T Consensus 521 R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k 586 (596)
T KOG1177|consen 521 RLGEEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSK 586 (596)
T ss_pred cccceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHHHH
Confidence 99999999999987655 58899999999999999999999999999999999999999999998
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-76 Score=607.18 Aligned_cols=511 Identities=37% Similarity=0.609 Sum_probs=442.4
Q ss_pred CCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhh
Q 009077 21 IPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (544)
Q Consensus 21 ~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (544)
.....++.+.+.+.++.+|+++|+++.+...++||+||.++++++|+.|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 7 ~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 7 MTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred ccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 34457999999999999999999998743335999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcEEEEeCCCCCCC--ccHHHHHhhccCCCCCcc
Q 009077 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GARIVTIDPPPENC--LHFSELITQADENEIPAV 177 (544)
Q Consensus 101 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 177 (544)
|++++|++|.+...++.++++.+++++++++....+.+....... ....+......... ..+++.............
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGPDADAR 166 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCcccccC
Confidence 999999999999999999999999999999988555554444332 11222222222221 245555333222222333
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCcc--CCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY--LHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
..+++++++++|||||||.||+|++||+++..+...... .+. +++.|++++.+|++|.+|+...++.++..|++
T Consensus 167 ~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~----~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~ 242 (534)
T COG0318 167 PVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAA----ALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGT 242 (534)
T ss_pred CCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHH----HhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCE
Confidence 378999999999999999999999999999988776655 334 78999999999999999998888888999999
Q ss_pred EEEcc--CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCC-ceEEEEecccCCHHHHHHHHHHCCCCceec
Q 009077 256 ILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSS-IRTVMSGAAPMGKELEDAVRAKLPHAKLGQ 332 (544)
Q Consensus 256 ~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~-l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~ 332 (544)
+++.. .+++..++..+.++++|++.++|+++..+++........+.. +|.++.||+++++++++++++.|+...+.+
T Consensus 243 ~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~ 322 (534)
T COG0318 243 LVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILE 322 (534)
T ss_pred EEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEE
Confidence 99988 589999999999999999999999999999998877766665 999999999999999999999996578999
Q ss_pred cccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC
Q 009077 333 GYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID 412 (544)
Q Consensus 333 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 412 (544)
.||+||++.+++...... . ....+..|.|+|+++++|+|++.+.+++ |++|||+++||+++.||+++++.+...|+
T Consensus 323 ~YG~TE~~~~~~~~~~~~-~--~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~ 398 (534)
T COG0318 323 GYGLTETSPVVTINPPDD-L--LAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFD 398 (534)
T ss_pred eecccccCceeecCCCch-h--hhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhc
Confidence 999999997666542211 1 2355667999999999999977666666 88999999999999999999999988875
Q ss_pred CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCC--C
Q 009077 413 KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNG--S 490 (544)
Q Consensus 413 ~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~ 490 (544)
.+|||+|||+|+++++|++++.||.+|+|+.+|++|+|.+||.++.++|.|.+++|++++++.+++.+++++++.++ .
T Consensus 399 ~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~ 478 (534)
T COG0318 399 EDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDA 478 (534)
T ss_pred cCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCC
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999876 3
Q ss_pred CCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 491 KITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 491 ~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
..+.+++.++++.+++.+++|+.++++++||+|++||++|+.|++.+.+
T Consensus 479 ~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 479 ELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred CCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 5588999999999999999999999999999999999999999999887
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=6.8e-77 Score=586.69 Aligned_cols=491 Identities=27% Similarity=0.401 Sum_probs=419.5
Q ss_pred HHhhhcc-CCCccEEEeCCCC---ceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEe
Q 009077 31 CFENISQ-FADRPCIINGPTG---DVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (544)
Q Consensus 31 l~~~a~~-~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (544)
+++.... .+++.|+++.++. +.+||+||.+.++++|+.|++ .|+ +||+|+++||+.++.++++|||+++|++++
T Consensus 15 ~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~ 93 (528)
T COG0365 15 LDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPA 93 (528)
T ss_pred hhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEe
Confidence 5555543 4789999887542 789999999999999999997 568 999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHH-----hhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCC
Q 009077 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLS-----EHHGARIVTIDPPPENCLHFSELITQADENEIPAVKIN 180 (544)
Q Consensus 106 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (544)
|+.+.++++.+..++++++++++|+.+......+... ......++++.... ..|.+.... .....+....+
T Consensus 94 ~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~---~~~~~~~~~-~~~~~~~~~~~ 169 (528)
T COG0365 94 VVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG---LWYDEAVEK-ASEKFEFEPLP 169 (528)
T ss_pred ecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc---ccHHHHhhc-cCCCCCccccC
Confidence 9999999999999999999999999887654322111 11111133333222 667776433 33333445588
Q ss_pred CCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc
Q 009077 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (544)
Q Consensus 181 ~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 260 (544)
.+|+++++|||||||.||+|+++|..+.......... .+.+.++|++++..+..|++|.++.++.+|..|+++++.+
T Consensus 170 ~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~---~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~e 246 (528)
T COG0365 170 ADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKF---HGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYD 246 (528)
T ss_pred CCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHH---hhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeC
Confidence 9999999999999999999999999887766655442 3456799999999999999999999999999999999876
Q ss_pred C--c-CHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccccc
Q 009077 261 K--F-DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT 337 (544)
Q Consensus 261 ~--~-~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~t 337 (544)
. + +++.+++.++++++|++++.|+.++.|++.......++++||.+.+.||+++++.++++.+.+ ++.|.+.||+|
T Consensus 247 g~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~~gqT 325 (528)
T COG0365 247 GRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDIYGQT 325 (528)
T ss_pred CCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEecccccc
Confidence 4 2 489999999999999999999999999999875567799999999999999999999999999 79999999999
Q ss_pred ccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecC--cccccccCChhhhhhhcCCCC
Q 009077 338 EAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA--QIMKGYLNDREATETTIDKEG 415 (544)
Q Consensus 338 E~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~~~ 415 (544)
|++.+.... .+ ....++.|.|+||++++++|++ +++++.|+ |+|+++.+ +++++||++++.+.+.+...
T Consensus 326 Etg~~~~~~-----~~-~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~- 396 (528)
T COG0365 326 ETGMGFIAG-----RP-PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGR- 396 (528)
T ss_pred ccCccccCC-----CC-CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc-
Confidence 999433321 11 3455666999999999999966 99999999 99999987 88999999999999888444
Q ss_pred ceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCC--
Q 009077 416 WLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKIT-- 493 (544)
Q Consensus 416 ~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~-- 493 (544)
||.|||.+++|+||+++|.||+||+||+.|+++.+.|||++|.+||.|.||.|++.+|+..++.+++||+++++-..+
T Consensus 397 ~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~~L 476 (528)
T COG0365 397 WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPNEL 476 (528)
T ss_pred eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876544
Q ss_pred HHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 494 EDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 494 ~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.++|++++++.+.+++.|+.|.+++.||||.+|||.|+.||+.+.+
T Consensus 477 ~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 477 AEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred HHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 3456667767777899999999999999999999999999999884
No 5
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=7.3e-75 Score=603.50 Aligned_cols=534 Identities=81% Similarity=1.281 Sum_probs=470.7
Q ss_pred cccceEEecCCCCCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 009077 6 DHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQ 85 (544)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~ 85 (544)
...+++++++++..+.++.+|+.+++.++++++|+++|+++.+.++.+||+||.++++++|+.|.+.|+++||+|+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~ 83 (537)
T PLN02246 4 ASEEFIFRSKLPDIYIPNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLP 83 (537)
T ss_pred ccceeEecCCCCCCCCCCCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECC
Confidence 45678999999999999999999999999999999999997655689999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHH
Q 009077 86 NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSEL 165 (544)
Q Consensus 86 ~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (544)
|+++++++++||+++|++++|++|.++..++..+++.++++++|++......+..........++.++........+.++
T Consensus 84 ~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (537)
T PLN02246 84 NCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSEL 163 (537)
T ss_pred CChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHH
Confidence 99999999999999999999999999999999999999999999998877766655433345566666544444455555
Q ss_pred HhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHH
Q 009077 166 ITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (544)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 245 (544)
... .....+.....++++++++|||||||.||+|.++|+++........+.....+++.++|++++.+|++|.+++...
T Consensus 164 ~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~ 242 (537)
T PLN02246 164 TQA-DENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSV 242 (537)
T ss_pred hcC-CCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHH
Confidence 332 2222233446789999999999999999999999999988877665544445678999999999999999998777
Q ss_pred HHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHC
Q 009077 246 LLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKL 325 (544)
Q Consensus 246 ~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~ 325 (544)
++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++........++++|.+++||+++++++.+.+.+.|
T Consensus 243 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~ 322 (537)
T PLN02246 243 LLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKL 322 (537)
T ss_pred HHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHc
Confidence 88999999999999999999999999999999999999999999887665556678999999999999999999999999
Q ss_pred CCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChh
Q 009077 326 PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDRE 405 (544)
Q Consensus 326 ~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 405 (544)
+++.+++.||+||++.+++.+............+++|+|+++++++++|++++.+++.|+.|||+++|+.++.||++++.
T Consensus 323 ~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~ 402 (537)
T PLN02246 323 PNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPE 402 (537)
T ss_pred CCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCch
Confidence 88999999999999876654422222223344578899999999999998788999999999999999999999999999
Q ss_pred hhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEE
Q 009077 406 ATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVV 485 (544)
Q Consensus 406 ~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 485 (544)
.+...++.++||+|||+++++++|++++.||.+|+|+.+|.+|++.+||+.|.++|+|.+++|++..+...++.++++++
T Consensus 403 ~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 482 (537)
T PLN02246 403 ATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVV 482 (537)
T ss_pred hhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEE
Confidence 98888878999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred ecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 486 RSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 486 ~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
..++...+.++++++++++++.|+.|..+.+++++|+|++||++|++|+++++++
T Consensus 483 ~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~~ 537 (537)
T PLN02246 483 RSNGSEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAAG 537 (537)
T ss_pred eCCCCCCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhcC
Confidence 8877777889999999999999999999999999999999999999999998764
No 6
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.2e-71 Score=581.23 Aligned_cols=525 Identities=39% Similarity=0.658 Sum_probs=441.2
Q ss_pred ccceEEecCCCCCCCCC--CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEE
Q 009077 7 HQEFIFRSKLPDIYIPN--HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLL 83 (544)
Q Consensus 7 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~ 83 (544)
....++.+..+..+.|+ +.++.+.+... +.+|+++|+++...+.++||+||.++++++|++|.+ .|+++||+|+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~ 98 (560)
T PLN02574 20 PETGIYSSKHPPVPLPSDPNLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLL 98 (560)
T ss_pred cCCeeecCCCCCCCCCCCCCCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 33566777665555544 24555555555 679999999986555689999999999999999999 999999999999
Q ss_pred cCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCC------CC
Q 009077 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP------PE 157 (544)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~------~~ 157 (544)
++|++++++++|||+++|++++|++|.++.+++.++++.+++++++++.+....+... ...++.++.. ..
T Consensus 99 ~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 174 (560)
T PLN02574 99 LPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL----GVPVIGVPENYDFDSKRI 174 (560)
T ss_pred CCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc----CCcEEecCcccccccCcc
Confidence 9999999999999999999999999999999999999999999999998765554331 2233333211 11
Q ss_pred CCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCcc-CCCCeEEEEecch
Q 009077 158 NCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY-LHKEDVILCVLPL 236 (544)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~ 236 (544)
....+.+++.... ...+.....++++++++|||||||.||+|.++|+++...+..+......... ....++++..+|+
T Consensus 175 ~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 253 (560)
T PLN02574 175 EFPKFYELIKEDF-DFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPM 253 (560)
T ss_pred CcccHHHHhhcCC-cccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecch
Confidence 2234555433321 1222234567899999999999999999999999998877655432111111 2356888999999
Q ss_pred hhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC-CCCCCCCceEEEEecccCCH
Q 009077 237 FHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV-DKYDMSSIRTVMSGAAPMGK 315 (544)
Q Consensus 237 ~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~-~~~~l~~l~~~~~~G~~l~~ 315 (544)
+|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.... ....++++|.++++|+++++
T Consensus 254 ~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~ 333 (560)
T PLN02574 254 FHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSG 333 (560)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCH
Confidence 99999977788888999999999889999999999999999999999999999887543 33457899999999999999
Q ss_pred HHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCc
Q 009077 316 ELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQ 395 (544)
Q Consensus 316 ~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 395 (544)
++++++.+.|+++.+++.||+||++.+++... ........+++|.|+++++++|+|++++.+++.|+.|||+++|++
T Consensus 334 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~---~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~ 410 (560)
T PLN02574 334 KFIQDFVQTLPHVDFIQGYGMTESTAVGTRGF---NTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPG 410 (560)
T ss_pred HHHHHHHHHCCCCcEEecccccccCceeecCC---CccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcc
Confidence 99999999998899999999999986543221 112224567899999999999999888999999999999999999
Q ss_pred ccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCC
Q 009077 396 IMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEA 475 (544)
Q Consensus 396 ~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~ 475 (544)
++.||+++++.+...++.+|||+|||+|+++++|++++.||.+|+|+.+|++|++.+||+.|.++|+|.+++|++++++.
T Consensus 411 ~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~ 490 (560)
T PLN02574 411 VMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKE 490 (560)
T ss_pred hhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccCC
Confidence 99999999999988888899999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 476 AGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 476 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
.++.++++|+..++...+.+++.++++++++.|+.|..++++++||+|++||++|+.|++++.+.
T Consensus 491 ~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~ 555 (560)
T PLN02574 491 CGEIPVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNS 555 (560)
T ss_pred CCcceEEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhc
Confidence 88899999998877778889999999999999999999999999999999999999999998764
No 7
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-74 Score=519.05 Aligned_cols=509 Identities=27% Similarity=0.422 Sum_probs=452.9
Q ss_pred CCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 19 IYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 19 ~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
..++...|+.+++.+.|+++||++|++++ ++.+||+||.++++++|+.|+++|+++||+|.+.+||..++++++||++
T Consensus 22 ~GyW~d~~l~d~L~~~A~~~pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALl 99 (542)
T COG1021 22 KGYWQDRTLTDILTDHAARYPDRIAVIDG--ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALL 99 (542)
T ss_pred cCcccCCcHHHHHHHHHhhcCCceEEecC--cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHH
Confidence 34666799999999999999999999988 7889999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch-----hHHHHHHHhhc-CcEEEEeCCCCCCCccHHHHHhhccCC
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY-----NDKVRDLSEHH-GARIVTIDPPPENCLHFSELITQADEN 172 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (544)
++|+.+|.--|+-...++.+.....+++.+|.+... .+..++....+ ..+.+.+.+..+......+.+......
T Consensus 100 rlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a~~ 179 (542)
T COG1021 100 RLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPAGL 179 (542)
T ss_pred HcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCcccc
Confidence 999999999898889999999999999999987643 34455555444 567777776555444444444555555
Q ss_pred CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhH-HHHHHHHH
Q 009077 173 EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLN-SVLLCALR 251 (544)
Q Consensus 173 ~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~~l~ 251 (544)
..+..+.++++++++..|.||||.||.|+.||.++..++..... .+++++..+.++.+|..|.+.+. -..++.++
T Consensus 180 ~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaE----iC~~~~~tvyL~~LP~AHNfplssPG~LGv~~ 255 (542)
T COG1021 180 FTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAE----ICGFDQQTVYLCALPAAHNFPLSSPGALGVFL 255 (542)
T ss_pred CCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhh----hhCcCccceEEEecccccCCCCCCcchhheee
Confidence 55566788899999999999999999999999999887776655 55699999999999999987653 34789999
Q ss_pred hCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCcee
Q 009077 252 VGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (544)
Q Consensus 252 ~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~ 331 (544)
.|+++|+.+..+++....+|+++++|+...+|.....|++..+....++++||.+-+||+.+++++.+++...+ +|.+.
T Consensus 256 agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQ 334 (542)
T COG1021 256 AGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQ 334 (542)
T ss_pred eccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccccCccccccccccCCCCccCCCeeeecc-CCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhh
Q 009077 332 QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETT 410 (544)
Q Consensus 332 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~ 410 (544)
+.|||+|.-. ++.-..++.+.-..+-|+|+ |.-+++|+| ++++++++|+.|+|..+||...+|||+.++-+...
T Consensus 335 QVFGMAEGLv----nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~a 409 (542)
T COG1021 335 QVFGMAEGLV----NYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARA 409 (542)
T ss_pred HHhhhhhhhh----cccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhc
Confidence 9999999642 22223344444556778888 778999999 68999999999999999999999999999999999
Q ss_pred cCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC
Q 009077 411 IDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS 490 (544)
Q Consensus 411 ~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 490 (544)
|+.+|||+|||+.+++++|++.+.||.+|+|+.+|++|-.+|||+.|.+||.|.++.++..+|+-.|++.+++|+.++ .
T Consensus 410 F~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~-~ 488 (542)
T COG1021 410 FDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKE-P 488 (542)
T ss_pred cCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999875 4
Q ss_pred CCCHHHHHHHHHhc-ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 491 KITEDEIKQYISKQ-VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 491 ~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
.....+|+++|.++ +..|++|++|.+++++|.|+-|||++++|++.+...
T Consensus 489 ~~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 489 PLRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred CCCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhh
Confidence 48889999999766 888999999999999999999999999999988754
No 8
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-71 Score=580.28 Aligned_cols=492 Identities=28% Similarity=0.444 Sum_probs=426.2
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.++.+++.++++++|+++|+++. ++.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~ 126 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE--RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARI 126 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEE
Confidence 48999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcEEEEeCCC-----CCCCccHHHHHhhccCCCCCccC
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GARIVTIDPP-----PENCLHFSELITQADENEIPAVK 178 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 178 (544)
+|+++.++.+++.++++.++++++|++++....+.+..... ....+..... ......++++...... ....
T Consensus 127 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 203 (549)
T PRK07788 127 ILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSST---APLP 203 (549)
T ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCCC---CCCC
Confidence 99999999999999999999999999988777665543222 2333322111 1234566666433222 1122
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..+++.++++|||||||.||+|.++|.++...+..... .+++.++++++...|++|.+|+ ..++.++..|+++++
T Consensus 204 ~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~ 278 (549)
T PRK07788 204 KPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLS----RVPFRAGETTLLPAPMFHATGW-AHLTLAMALGSTVVL 278 (549)
T ss_pred CCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHh----hCCCCcCCeEEEccchHHHHHH-HHHHHHHHhCCEEEE
Confidence 34578899999999999999999999999887766554 3457889999999999999998 556778999999999
Q ss_pred ccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccc
Q 009077 259 MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (544)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~ 336 (544)
...+++..+++.++++++|++.++|+++..+++.... ....++++|.+++||+++++++.+.+++.| ++.+++.||+
T Consensus 279 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~ 357 (549)
T PRK07788 279 RRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGS 357 (549)
T ss_pred CCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCc
Confidence 9889999999999999999999999999999887654 445578999999999999999999999999 7889999999
Q ss_pred cccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCc
Q 009077 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGW 416 (544)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 416 (544)
||++.++.... .......+++|+|+++++++++| +++++++.|+.|||+++|+.++.||++++.. . ..+||
T Consensus 358 TE~~~~~~~~~----~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~---~-~~~g~ 428 (549)
T PRK07788 358 TEVAFATIATP----EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK---Q-IIDGL 428 (549)
T ss_pred chhchhhccCh----hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc---c-ccCCc
Confidence 99985443321 11223457899999999999999 4688999999999999999999999988765 1 25799
Q ss_pred eecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHH
Q 009077 417 LHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDE 496 (544)
Q Consensus 417 ~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 496 (544)
|+|||+++++++|++++.||.||+|+.+|++|+|.+||+.|.++|+|.+++|++.+++..++.++++|++.++...+.++
T Consensus 429 ~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~ 508 (549)
T PRK07788 429 LSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDA 508 (549)
T ss_pred eecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999998877788999
Q ss_pred HHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 497 IKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 497 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
++++++++++.|++|..++++++||+|++||++|++|+++
T Consensus 509 l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 509 IKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred HHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 9999999999999999999999999999999999999863
No 9
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.5e-71 Score=584.27 Aligned_cols=515 Identities=20% Similarity=0.302 Sum_probs=422.4
Q ss_pred CCCCCHH-HHHHhhhccCCCccEEEeCC----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 22 PNHLPLH-TYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 22 ~~~~~~~-~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
...+|+. +.++++++.+|+++|+++.+ .++.+||+||+++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 48 ~~~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA 127 (628)
T TIGR02316 48 GGRTNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLA 127 (628)
T ss_pred CCEeeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 3345554 57778888899999998732 247899999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch---------hHHHHHHHhh---cCcEEEEeCCCC-------C
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---------NDKVRDLSEH---HGARIVTIDPPP-------E 157 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~---~~~~~v~~~~~~-------~ 157 (544)
|+++|++++|+++.++.+++.++++.++++++|+++.. ...+...... ....++.++... .
T Consensus 128 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 207 (628)
T TIGR02316 128 CARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPG 207 (628)
T ss_pred HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccC
Confidence 99999999999999999999999999999999997642 2222222221 133455554321 1
Q ss_pred CCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchh
Q 009077 158 NCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLF 237 (544)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (544)
....+.++.........+.....++++++++|||||||.||+|.++|.++......... ..+++.++|++++..|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~ 284 (628)
T TIGR02316 208 RDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMW---AIFGIRAGQVMFSASDVG 284 (628)
T ss_pred ccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHH---HhcCCCCCcEEEEcCCCC
Confidence 22355555333222222333457899999999999999999999999998644332222 134678999999999999
Q ss_pred hHHhhHHHHHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecc
Q 009077 238 HIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAA 311 (544)
Q Consensus 238 ~~~g~~~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~ 311 (544)
|..|+...++.++..|+++++.++ .++..+++.++++++|++.++|++++.|.+.... ....++++|.++++|+
T Consensus 285 ~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 285 WVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGE 364 (628)
T ss_pred eeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 999887788999999999999763 4789999999999999999999999988876432 3345789999999999
Q ss_pred cCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEE
Q 009077 312 PMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICI 391 (544)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v 391 (544)
++++++++++.+.+ +..+++.||+||++..+..... .........++.|.|+++++++++|++++++++.|+.|||++
T Consensus 365 ~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~-~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v 442 (628)
T TIGR02316 365 PLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMP-GLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTV 442 (628)
T ss_pred CCCHHHHHHHHHHh-CCCEEecccccccCceeecCCC-CCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEE
Confidence 99999999999988 7899999999999853332211 111112345788999999999999976899999999999999
Q ss_pred ecC---cccccccCChhhhhhhc---CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcce
Q 009077 392 RGA---QIMKGYLNDREATETTI---DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISD 465 (544)
Q Consensus 392 ~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~ 465 (544)
+|| +...+|+++++.+...+ .+++||+|||+|++++||+++++||+||+||++|++|+|.+||++|.++|.|.+
T Consensus 443 ~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~e 522 (628)
T TIGR02316 443 VPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAE 522 (628)
T ss_pred ecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcce
Confidence 998 46788999887665543 257899999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeeCCCCCceEEEEEEecCCCCC--------CHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHH
Q 009077 466 AAVVPMKDEAAGEVPVAFVVRSNGSKI--------TEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKL 537 (544)
Q Consensus 466 ~~v~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 537 (544)
++|++++++..++.++++|++.++... ..++|+++++++|+.|++|+.++++++||+|++||++|+.|++.+
T Consensus 523 a~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~ 602 (628)
T TIGR02316 523 VAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALA 602 (628)
T ss_pred EEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHH
Confidence 999999999889999999998765432 246899999999999999999999999999999999999999988
Q ss_pred hhcc
Q 009077 538 AAGD 541 (544)
Q Consensus 538 ~~~~ 541 (544)
.+..
T Consensus 603 ~~~~ 606 (628)
T TIGR02316 603 EGRD 606 (628)
T ss_pred cCCC
Confidence 7543
No 10
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.1e-70 Score=572.84 Aligned_cols=531 Identities=40% Similarity=0.694 Sum_probs=454.1
Q ss_pred ccccccceEEecCCCCCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 009077 3 AKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIML 82 (544)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i 82 (544)
++++.++-++.+..+....+...|+.+++.+.++++|+++|+.+...++.+||+||.+++.++|+.|.+.|+++|++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i 85 (546)
T PLN02330 6 QKQEDNEHIFRSRYPSVPVPDKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVV 85 (546)
T ss_pred hhccccceeeccCCCCCCCCCCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 46677888999998888888889999999999999999999987655689999999999999999999999999999999
Q ss_pred EcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCC-CCCCcc
Q 009077 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP-PENCLH 161 (544)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~ 161 (544)
+++|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+... ...++.++.. ......
T Consensus 86 ~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~ 161 (546)
T PLN02330 86 VLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL----GLPVIVLGEEKIEGAVN 161 (546)
T ss_pred ECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc----CCcEEEecCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999998877665432 3344544432 223455
Q ss_pred HHHHHhhccCC--CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhH
Q 009077 162 FSELITQADEN--EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHI 239 (544)
Q Consensus 162 ~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 239 (544)
|.+++...... ..+.....++++++++|||||||.||+|.++|.++...+........ ......+..+..+|++|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~h~ 239 (546)
T PLN02330 162 WKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVG--PEMIGQVVTLGLIPFFHI 239 (546)
T ss_pred HHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccC--ccccCceEEEEecChHHH
Confidence 66665433221 11233456789999999999999999999999999876654321111 122345688999999999
Q ss_pred HhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCC--CceEEEEecccCCHHH
Q 009077 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMS--SIRTVMSGAAPMGKEL 317 (544)
Q Consensus 240 ~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~--~l~~~~~~G~~l~~~~ 317 (544)
+++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+.+........+. .+|.++++|+++++++
T Consensus 240 ~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~ 319 (546)
T PLN02330 240 YGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPEL 319 (546)
T ss_pred HHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHH
Confidence 99877888999999999999999999999999999999999999999999886544443343 4689999999999999
Q ss_pred HHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCccc
Q 009077 318 EDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIM 397 (544)
Q Consensus 318 ~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 397 (544)
++++.+.|+++++++.||+||++.+...+.............++|.|+++++++++|++++.+++.|+.|||+++|+.++
T Consensus 320 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~ 399 (546)
T PLN02330 320 LTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVM 399 (546)
T ss_pred HHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhh
Confidence 99999999899999999999998654332111111112334678999999999999987889999999999999999999
Q ss_pred ccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCC
Q 009077 398 KGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAG 477 (544)
Q Consensus 398 ~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~ 477 (544)
.||+++++.+...++.++||+|||+++++++|++++.||.+|+|+.+|++|++.+||+.|.+++.|.+++|++++++..+
T Consensus 400 ~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g 479 (546)
T PLN02330 400 QGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAG 479 (546)
T ss_pred hhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccC
Confidence 99999999888888889999999999999999999999999999999999999999999999999999999999988888
Q ss_pred ceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 478 EVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 478 ~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
+.+++++++.++...+.++++++++++++.++.|+.+++++++|+|++||++|++|++++..
T Consensus 480 ~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~ 541 (546)
T PLN02330 480 EIPAACVVINPKAKESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLS 541 (546)
T ss_pred ceeEEEEEECCCCCCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHh
Confidence 99999999887777788899999999999999999999999999999999999999999864
No 11
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.1e-70 Score=581.63 Aligned_cols=509 Identities=22% Similarity=0.327 Sum_probs=417.6
Q ss_pred CCCCH-HHHHHhhhc-cCCCccEEEeCC----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 23 NHLPL-HTYCFENIS-QFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 23 ~~~~~-~~~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
..+|+ .+.++++++ .+|+++|+++.. ..+.+||+||.++++++|+.|++.|+++||+|+++++|++++++++||
T Consensus 85 ~~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA 164 (666)
T PLN02654 85 GKTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLA 164 (666)
T ss_pred CEeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34666 456666665 489999998732 136899999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhH---------HHHHHHhhc-----Cc-EEEEeCCCC-----
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND---------KVRDLSEHH-----GA-RIVTIDPPP----- 156 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~-----~~-~~v~~~~~~----- 156 (544)
|+++|++++|+++.++.+.+..+++.++++++|+++.... .+....... .. ..+..+...
T Consensus 165 ~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (666)
T PLN02654 165 CARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKRE 244 (666)
T ss_pred HHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccc
Confidence 9999999999999999999999999999999999876421 122211111 11 112222110
Q ss_pred ------CCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEE
Q 009077 157 ------ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVI 230 (544)
Q Consensus 157 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 230 (544)
.....|+++.... ....+.....++++++++|||||||.||+|.++|.++......... ..+++.++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~---~~~~~~~~d~~ 320 (666)
T PLN02654 245 DTKWQEGRDVWWQDVVPNY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFK---YAFDYKPTDVY 320 (666)
T ss_pred ccccccCCcccHHHHhhcC-CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHH---HhcCCCCCcEE
Confidence 0112244443221 1112233467899999999999999999999999998644332221 13468899999
Q ss_pred EEecchhhHHhhHHHHHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCce
Q 009077 231 LCVLPLFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIR 304 (544)
Q Consensus 231 ~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~ 304 (544)
++..|++|..|....++.++..|+++++.++ .++..+++.++++++|++.++|++++.|.+.... ....++++|
T Consensus 321 ~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr 400 (666)
T PLN02654 321 WCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLR 400 (666)
T ss_pred EEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhhee
Confidence 9999999999987888999999999999764 4789999999999999999999999999987542 334678999
Q ss_pred EEEEecccCCHHHHHHHHHHCCC--CceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCC
Q 009077 305 TVMSGAAPMGKELEDAVRAKLPH--AKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLP 382 (544)
Q Consensus 305 ~~~~~G~~l~~~~~~~~~~~~~~--~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 382 (544)
.++++|++++++.++++.+.++. +.+.+.||+||+++...... +.......+++|.|++|++++|+| +++++++
T Consensus 401 ~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~---~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~ 476 (666)
T PLN02654 401 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL---PGAWPQKPGSATFPFFGVQPVIVD-EKGKEIE 476 (666)
T ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccC---CCCCCCCCCccCCCCCCceEEEEC-CCCCCCC
Confidence 99999999999999999999842 78999999999986544211 111234567899999999999999 5688888
Q ss_pred CCCceeEEEec--CcccccccCChhhhhhhcC--CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHH
Q 009077 383 RNQAGEICIRG--AQIMKGYLNDREATETTID--KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLI 458 (544)
Q Consensus 383 ~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~ 458 (544)
.++.|||++++ |+++.||+++++.+...+. .+|||+|||++++++||++++.||+||+|+++|++|++.+||++|.
T Consensus 477 ~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~ 556 (666)
T PLN02654 477 GECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALV 556 (666)
T ss_pred CCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHH
Confidence 88899999999 7899999999987766542 3799999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCH---HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHh
Q 009077 459 AHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITE---DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 459 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
++|.|.+++|++++++..++.++++|++.++...+. ++|+++++.+|+.+++|+.|+++++||+|.+||++|+.|++
T Consensus 557 ~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~ 636 (666)
T PLN02654 557 SHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 636 (666)
T ss_pred hCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHH
Confidence 999999999999999989999999999988765544 37888999999999999999999999999999999999999
Q ss_pred HHhh
Q 009077 536 KLAA 539 (544)
Q Consensus 536 ~~~~ 539 (544)
.+.+
T Consensus 637 ~~~~ 640 (666)
T PLN02654 637 IASR 640 (666)
T ss_pred HHcC
Confidence 8864
No 12
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.6e-71 Score=581.03 Aligned_cols=508 Identities=20% Similarity=0.301 Sum_probs=410.2
Q ss_pred CCCH-HHHHHhhhcc--CCCccEEEeCCC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 24 HLPL-HTYCFENISQ--FADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 24 ~~~~-~~~l~~~a~~--~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
.+|+ .+.++++++. +|+++|+++..+ .+++||+||.++++++|+.|+++|+++||+|+++++|++++++++||
T Consensus 57 ~~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA 136 (647)
T PTZ00237 57 ELNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLS 136 (647)
T ss_pred eeeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 3444 4455566544 799999987422 36899999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecc---------hhHHHHHHHhhc---CcEEEEeCC-C--------
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV---------YNDKVRDLSEHH---GARIVTIDP-P-------- 155 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~---~~~~v~~~~-~-------- 155 (544)
|+++|++++|+++.++.+++.+++++++++++|+++. ..+.+.+..... ..+++.+.. .
T Consensus 137 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 216 (647)
T PTZ00237 137 CARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLK 216 (647)
T ss_pred HHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccc
Confidence 9999999999999999999999999999999999752 222333322211 123443311 0
Q ss_pred -------CCCCccHHHHHhhcc----CCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccC
Q 009077 156 -------PENCLHFSELITQAD----ENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL 224 (544)
Q Consensus 156 -------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~ 224 (544)
......|++++.... .........+++++++++|||||||.||+|.++|.+........... .+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~---~~~~ 293 (647)
T PTZ00237 217 KIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS---IIEK 293 (647)
T ss_pred cccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH---hcCC
Confidence 012234666543211 11122345678999999999999999999999999843333322221 2346
Q ss_pred CCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC--c----CHHHHHHHHHhccceeccCcHHHHHHHHhcCCC---
Q 009077 225 HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK--F----DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--- 295 (544)
Q Consensus 225 ~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~--~----~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--- 295 (544)
..++++++..|++|+.+. ..++.++..|+++++.+. . .+..+++.++++++|++.++|++++.|++....
T Consensus 294 ~~~d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 372 (647)
T PTZ00237 294 DIPTVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATI 372 (647)
T ss_pred CCCcEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccc
Confidence 678999999999998665 568889999999998764 1 268899999999999999999999999875422
Q ss_pred --CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEE
Q 009077 296 --DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIV 373 (544)
Q Consensus 296 --~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 373 (544)
....++++|.++++|+++++++.+++++.+ ++.+++.||+||++....... .......+++|+|+|+++++|+
T Consensus 373 ~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~----~~~~~~~~s~G~p~~g~~~~i~ 447 (647)
T PTZ00237 373 IRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCY----GHINIPYNATGVPSIFIKPSIL 447 (647)
T ss_pred cccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccC----CCCCCCCCCCccCcCCceEEEE
Confidence 234578999999999999999999999999 799999999999985443221 1122334789999999999999
Q ss_pred cCCCCCCCCCCCceeEEEecC---cccccccCChhhhhhhcCC-CCceecCceEEEcCCCcEEEEccccceEEeCceeeC
Q 009077 374 DPDTGISLPRNQAGEICIRGA---QIMKGYLNDREATETTIDK-EGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVA 449 (544)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~ 449 (544)
|+ ++++++.|+.|||++++| +++.||+++++.+...|.. +|||+|||+|+++++|++++.||+||+|+.+|++|+
T Consensus 448 d~-~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~ 526 (647)
T PTZ00237 448 SE-DGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQ 526 (647)
T ss_pred CC-CCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeC
Confidence 94 789999999999999986 7889999999888776643 799999999999999999999999999999999999
Q ss_pred cHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCC---CCCCH----HHHHHHHHhcccCCCcccEEEEecCCCC
Q 009077 450 PAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNG---SKITE----DEIKQYISKQVVFYKRINRVFFTDSIPK 522 (544)
Q Consensus 450 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~---~~~~~----~~l~~~l~~~l~~~~~p~~~~~~~~lP~ 522 (544)
|.+||++|.++|.|.+++|++++++..++.++++|++.++ ...+. ++|+++++++|+++++|+.|+++++||+
T Consensus 527 p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~ 606 (647)
T PTZ00237 527 LNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPK 606 (647)
T ss_pred HHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCC
Confidence 9999999999999999999999999999999999998743 23343 4567788889999999999999999999
Q ss_pred CCCcccchHHHHhHHhhcc
Q 009077 523 APSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 523 t~~GK~~r~~l~~~~~~~~ 541 (544)
|++||++|+.|++++.+..
T Consensus 607 T~sGKi~R~~Lr~~~~~~~ 625 (647)
T PTZ00237 607 TKTGKIPRQIISKFLNDSN 625 (647)
T ss_pred CCCccEeHHHHHHHHcCCC
Confidence 9999999999999986543
No 13
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.3e-70 Score=573.81 Aligned_cols=503 Identities=25% Similarity=0.373 Sum_probs=415.7
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
+.|+.++|.+.++++|+++|+++. ++.+||+||.++++++|++|.++|+++||+|+++++|+++++++++||+++|++
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav 83 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTISG--NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGI 83 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEecC--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEE
Confidence 468999999999999999999875 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhh-c-CcEE-EEeCCCCC-------CCccHHHHHhhccCCC
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH-H-GARI-VTIDPPPE-------NCLHFSELITQADENE 173 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~-~~~~-v~~~~~~~-------~~~~~~~~~~~~~~~~ 173 (544)
++|+++.++.+++.++++.++++++++++............ . ..+. +..+.... .....+++........
T Consensus 84 ~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (563)
T PLN02860 84 VAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALGTT 163 (563)
T ss_pred EEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccccc
Confidence 99999999999999999999999999987654333322111 1 1222 22222110 0111111111100011
Q ss_pred CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhC
Q 009077 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (544)
Q Consensus 174 ~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g 253 (544)
.......++++++++|||||||.||+|.++|.++......... .+++.++|+++...|++|..++ ..++.++..|
T Consensus 164 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G 238 (563)
T PLN02860 164 ELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA----IVGYGEDDVYLHTAPLCHIGGL-SSALAMLMVG 238 (563)
T ss_pred cccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh----hcCCCCCCEEEEecCchhhccH-HHHHHHHHcC
Confidence 1112346789999999999999999999999999776554433 3457889999999999999998 5678899999
Q ss_pred cEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCC--CCCCCCceEEEEecccCCHHHHHHHHHHCCCCcee
Q 009077 254 AAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD--KYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (544)
Q Consensus 254 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~--~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~ 331 (544)
+++++.+.+++..+++.++++++|++.++|+++..|++..... ...++++|.+++||+++++++.+.+++.|+++.++
T Consensus 239 ~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~ 318 (563)
T PLN02860 239 ACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLF 318 (563)
T ss_pred ceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCcee
Confidence 9999998999999999999999999999999999998765322 24567999999999999999999999999889999
Q ss_pred ccccccccCccccccccccCC------------------CCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEec
Q 009077 332 QGYGMTEAGPVLSMCLAFAKE------------------PFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (544)
Q Consensus 332 ~~yG~tE~~~~~~~~~~~~~~------------------~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 393 (544)
+.||+||++..++........ .......++|+|++++++++++++ .|+.|||+++|
T Consensus 319 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~g 392 (563)
T PLN02860 319 SAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTRG 392 (563)
T ss_pred cCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEEec
Confidence 999999998644322111100 001122368999999999999853 57889999999
Q ss_pred CcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeC
Q 009077 394 AQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKD 473 (544)
Q Consensus 394 ~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~ 473 (544)
+.++.||+++++.+...+..+|||+|||+|+++++|++++.||++|+|+.+|++|+|.+||+++.++|+|.+++|+++++
T Consensus 393 ~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~ 472 (563)
T PLN02860 393 PHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVPD 472 (563)
T ss_pred CcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEEec
Confidence 99999999999988888878999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEecCCC--------------CCCHHHHHHHHHh-cccCCCcccEEEEe-cCCCCCCCcccchHHHHhHH
Q 009077 474 EAAGEVPVAFVVRSNGS--------------KITEDEIKQYISK-QVVFYKRINRVFFT-DSIPKAPSGKILRKDLRTKL 537 (544)
Q Consensus 474 ~~~~~~~~~~v~~~~~~--------------~~~~~~l~~~l~~-~l~~~~~p~~~~~~-~~lP~t~~GK~~r~~l~~~~ 537 (544)
+..++.++++|++.++. ..+.+++++++++ .|+.|++|..++++ +.||+|++||++|++|++++
T Consensus 473 ~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~ 552 (563)
T PLN02860 473 SRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRREV 552 (563)
T ss_pred CcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHHHH
Confidence 88899999999987652 3556789999987 59999999988765 67999999999999999988
Q ss_pred hh
Q 009077 538 AA 539 (544)
Q Consensus 538 ~~ 539 (544)
.+
T Consensus 553 ~~ 554 (563)
T PLN02860 553 LS 554 (563)
T ss_pred HH
Confidence 54
No 14
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=4.8e-70 Score=576.65 Aligned_cols=508 Identities=24% Similarity=0.340 Sum_probs=422.5
Q ss_pred CCH-HHHHHhhhccCCCccEEEeCCC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHh
Q 009077 25 LPL-HTYCFENISQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (544)
Q Consensus 25 ~~~-~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (544)
+|+ .+.++++++.+|+++|+++..+ .+.+||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 56 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 135 (625)
T TIGR02188 56 LNVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACAR 135 (625)
T ss_pred EEHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 344 4556677888999999987432 36899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh---------HHHHHHHhhcC--c-EEEEeCCCC-------CCCc
Q 009077 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---------DKVRDLSEHHG--A-RIVTIDPPP-------ENCL 160 (544)
Q Consensus 100 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~--~-~~v~~~~~~-------~~~~ 160 (544)
+|++++|++|.++.+.+.++++.++++++|+++... ..+.+...... . .++.++... ....
T Consensus 136 ~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (625)
T TIGR02188 136 IGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDV 215 (625)
T ss_pred hCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccc
Confidence 999999999999999999999999999999987532 22333322221 2 234433211 1123
Q ss_pred cHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHH
Q 009077 161 HFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIY 240 (544)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 240 (544)
.+++++... ..........++++++++|||||||.||+|.++|.++......... ..+++.++|++++..|++|..
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~ 291 (625)
T TIGR02188 216 WWHDLMAKA-SAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMK---YVFDIKDGDIFWCTADVGWIT 291 (625)
T ss_pred cHHHHHhhc-CCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHH---hccCCCCCcEEEECCCchhhh
Confidence 455553332 2222344567899999999999999999999999998655443322 134678899999999999999
Q ss_pred hhHHHHHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCC
Q 009077 241 SLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMG 314 (544)
Q Consensus 241 g~~~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~ 314 (544)
+....++.++..|+++++.+. .++..+++.++++++|++.++|++++.|.+.... ....++++|.++++|++++
T Consensus 292 g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~ 371 (625)
T TIGR02188 292 GHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPIN 371 (625)
T ss_pred ccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCC
Confidence 887788999999999998753 4789999999999999999999999999887543 2345789999999999999
Q ss_pred HHHHHHHHHHCC--CCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCC-CCCceeEEE
Q 009077 315 KELEDAVRAKLP--HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLP-RNQAGEICI 391 (544)
Q Consensus 315 ~~~~~~~~~~~~--~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~-~g~~Gel~v 391 (544)
+++++++.+.++ ++.+++.||+||++..+..... .......+++|+|+++++++++| +++.+++ .|+.|||++
T Consensus 372 ~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~---~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v 447 (625)
T TIGR02188 372 PEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLP---GATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVI 447 (625)
T ss_pred HHHHHHHHHHcCCCCCceEecccccccCCceeecCC---CCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEE
Confidence 999999999884 3889999999999866443211 11234567899999999999999 6788888 899999999
Q ss_pred ec--CcccccccCChhhhhhhcC--CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeE
Q 009077 392 RG--AQIMKGYLNDREATETTID--KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAA 467 (544)
Q Consensus 392 ~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~ 467 (544)
++ |+++.||+++++.+...+. .+|||+|||+++++++|++++.||+||+|+++|++|+|.+||++|.++|.|.+++
T Consensus 448 ~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~ 527 (625)
T TIGR02188 448 KQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAA 527 (625)
T ss_pred ccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEE
Confidence 99 6899999999987766542 4789999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeCCCCCceEEEEEEecCCCCCCH---HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 468 VVPMKDEAAGEVPVAFVVRSNGSKITE---DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 468 v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
|++++++..++.++++|++.++...+. ++|++++++.|+.+++|+.|+++++||+|++||++|+.|++.+.+.
T Consensus 528 vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 528 VVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred EEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 999999988999999999987765543 6899999999999999999999999999999999999999987654
No 15
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.1e-69 Score=565.71 Aligned_cols=512 Identities=29% Similarity=0.435 Sum_probs=435.9
Q ss_pred CCCCCCCCCCHHHHHHhhhccCCCccEEEeCCC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHH
Q 009077 17 PDIYIPNHLPLHTYCFENISQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF 92 (544)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~ 92 (544)
.+...+...|+.+.|.+.++.+|+++|+++... .+.+||+||+++++++|++|.+.|+++|++|+++++|++++++
T Consensus 16 ~~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~ 95 (547)
T PRK13295 16 IAAGHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTV 95 (547)
T ss_pred hcCCCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHH
Confidence 344455567999999999999999999987531 1789999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch-----hHHHHHHHhhc-Cc-EEEEeCCCCCCCccHHHH
Q 009077 93 AFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY-----NDKVRDLSEHH-GA-RIVTIDPPPENCLHFSEL 165 (544)
Q Consensus 93 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~~~~ 165 (544)
++|||+++|++++|++|.++.+.+.++++.++++++++++.. .+.+.++.... .. .++.++.. ...++.++
T Consensus 96 ~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 173 (547)
T PRK13295 96 LYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGD--GADSFEAL 173 (547)
T ss_pred HHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCC--CccCHHHH
Confidence 999999999999999999999999999999999999998764 22232222222 22 23333322 22345554
Q ss_pred HhhccC-------CCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhh
Q 009077 166 ITQADE-------NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFH 238 (544)
Q Consensus 166 ~~~~~~-------~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 238 (544)
+..... .........++++++++|||||||.||+|.++|.++...+..... .+++.+++++++..|++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~h 249 (547)
T PRK13295 174 LITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAE----RLGLGADDVILMASPMAH 249 (547)
T ss_pred hhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHH----HhCCCCCCeEEEecCchh
Confidence 321100 011122356789999999999999999999999999887776554 345788999999999999
Q ss_pred HHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHH
Q 009077 239 IYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELE 318 (544)
Q Consensus 239 ~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~ 318 (544)
..+++..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+........++++|.++++|+++++++.
T Consensus 250 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~ 329 (547)
T PRK13295 250 QTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALV 329 (547)
T ss_pred hhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHH
Confidence 99988889999999999999988999999999999999999999999999998776666678899999999999999999
Q ss_pred HHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccc
Q 009077 319 DAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMK 398 (544)
Q Consensus 319 ~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 398 (544)
+++++.| ++++++.||+||++.+++.+.. ........++|.|+++++++++|+ ++.+++.|+.|||+++|+.++.
T Consensus 330 ~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~g~~~~~ 404 (547)
T PRK13295 330 ERARAAL-GAKIVSAWGMTENGAVTLTKLD---DPDERASTTDGCPLPGVEVRVVDA-DGAPLPAGQIGRLQVRGCSNFG 404 (547)
T ss_pred HHHHHHh-CCCeEEeccCCCCCCeeeccCC---CcchhccCccccccCCcEEEEECC-CCCCCCCCCCCeEEEEcCcccc
Confidence 9999999 8999999999999865543321 111233467899999999999994 6789999999999999999999
Q ss_pred cccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCc
Q 009077 399 GYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGE 478 (544)
Q Consensus 399 gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~ 478 (544)
||+++++.+... .+|||+|||+++++++|++++.||.+|+|+.+|+++++.+||+.|.++++|.+++|++++++..++
T Consensus 405 gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~ 482 (547)
T PRK13295 405 GYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGE 482 (547)
T ss_pred cccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCc
Confidence 999998877654 578999999999999999999999999999999999999999999999999999999999888889
Q ss_pred eEEEEEEecCCCCCCHHHHHHHHHh-cccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 479 VPVAFVVRSNGSKITEDEIKQYISK-QVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 479 ~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
.+++++++.++...+.+++.+++.+ .++.+++|+.++++++||+|.+||++|.+|++++.+.+
T Consensus 483 ~~~~~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~~~ 546 (547)
T PRK13295 483 RACAFVVPRPGQSLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRGED 546 (547)
T ss_pred EEEEEEEeCCCCCCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhcCC
Confidence 9999999887777778899999986 79999999999999999999999999999999987654
No 16
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.3e-69 Score=571.81 Aligned_cols=505 Identities=29% Similarity=0.443 Sum_probs=423.7
Q ss_pred CCHHHHHHhhhccCCCccEEEeC------CCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 25 LPLHTYCFENISQFADRPCIING------PTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~------~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
.|+.++|.+.++++|+++|+++. +..+++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||+
T Consensus 25 ~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~ 104 (632)
T PRK07529 25 ASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGE 104 (632)
T ss_pred CCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 48999999999999999999863 135789999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh-----HHHHHHHhhc-CcE-EEEeCCCC---------------
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEHH-GAR-IVTIDPPP--------------- 156 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-~~~-~v~~~~~~--------------- 156 (544)
++| +++|++|.++.+++.++++.++++++|+++... ..+....... ..+ ++.++...
T Consensus 105 ~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 183 (632)
T PRK07529 105 AAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRR 183 (632)
T ss_pred HhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccccccc
Confidence 999 579999999999999999999999999986532 2333322222 222 33333211
Q ss_pred ---CCCccHHHHHhhccCCC-CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEE
Q 009077 157 ---ENCLHFSELITQADENE-IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILC 232 (544)
Q Consensus 157 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (544)
.....+.+.+....... .......++++++++|||||||.||+|.++|.++......... .+++.+++++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~----~~~~~~~d~~l~ 259 (632)
T PRK07529 184 KAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL----LLGLGPGDTVFC 259 (632)
T ss_pred ccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH----hcCCCCCCEEEE
Confidence 12335555543332221 1223356799999999999999999999999999877655543 345689999999
Q ss_pred ecchhhHHhhHHHHHHHHHhCcEEEEccCc------CHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEE
Q 009077 233 VLPLFHIYSLNSVLLCALRVGAAILIMQKF------DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTV 306 (544)
Q Consensus 233 ~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~------~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~ 306 (544)
.+|++|..+++..++.++..|+++++.++. ....+++.++++++|++.++|+++..|++.... ...++++|.+
T Consensus 260 ~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~slr~v 338 (632)
T PRK07529 260 GLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDISSLRYA 338 (632)
T ss_pred ecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCccceEEE
Confidence 999999999988899999999999997642 246789999999999999999999999887532 3457899999
Q ss_pred EEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcC-CCC---CCCC
Q 009077 307 MSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDP-DTG---ISLP 382 (544)
Q Consensus 307 ~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~---~~~~ 382 (544)
++||+++++++.+++++.+ ++++++.||+||++.++... ........+++|.|+|+++++++.. +++ .+++
T Consensus 339 ~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~----~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~ 413 (632)
T PRK07529 339 LCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVN----PPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCA 413 (632)
T ss_pred EEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccC----CccccccCCCcccccCCceEEEEEcCCCCcccccCC
Confidence 9999999999999999998 89999999999998665432 1122335678999999999998632 345 7889
Q ss_pred CCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCC
Q 009077 383 RNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPN 462 (544)
Q Consensus 383 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~ 462 (544)
.|+.|||+++|++++.||++++. +...+..++||+|||+|+++++|++++.||++|+|+.+|.+|+|.+||+.|.++|.
T Consensus 414 ~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~ 492 (632)
T PRK07529 414 VDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPA 492 (632)
T ss_pred CCCceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCC
Confidence 99999999999999999998654 44555578999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhccc-CCCcccEEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 463 ISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVV-FYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 463 v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
|.+++|++.+++..++.++++|++.++...+.++++++++.+++ .+++|+.++++++||+|++||++|.+|++.+..+.
T Consensus 493 V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~~~ 572 (632)
T PRK07529 493 VALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGKIFKPALRRDAIRRV 572 (632)
T ss_pred eeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcccHHHHHHHHHHHH
Confidence 99999999999888999999999998888889999999999987 47999999999999999999999999999887654
No 17
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=8.1e-70 Score=563.53 Aligned_cols=496 Identities=21% Similarity=0.295 Sum_probs=407.7
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
..++.+.|.+.++++|+++|+.+.. .+++||+||.++++++|+.|.+ .+||+|+++++|++++++++|||+++|++
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~v 93 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGKI 93 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCCe
Confidence 3689999999999999999997652 3689999999999999999987 38999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhh---cCcEEEEeCCCCCCCccHHHHHhhcc---CCC----
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH---HGARIVTIDPPPENCLHFSELITQAD---ENE---- 173 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~---- 173 (544)
++|++|.++.+++.++++.+++++++++......+.+.... ....++.++.... ...+.+...... ...
T Consensus 94 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (539)
T PRK06334 94 PVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRK-ELSFWEKCRIGIYMSIPFEWLM 172 (539)
T ss_pred eEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhh-hccHHHhhhhhhhhcCCchhhh
Confidence 99999999999999999999999999998776665543321 1123344332111 111111111000 000
Q ss_pred --CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHH
Q 009077 174 --IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALR 251 (544)
Q Consensus 174 --~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 251 (544)
.......++++++++|||||||.||+|.++|+++......... .+++.++|++++.+|++|.+|+...++.++.
T Consensus 173 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 248 (539)
T PRK06334 173 RWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK----FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLL 248 (539)
T ss_pred hcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH----hcCCCCCceEEEecchHhhhhhHHHHHHHHH
Confidence 0112456799999999999999999999999999877665544 3457889999999999999998777888999
Q ss_pred hCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCce
Q 009077 252 VGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKL 330 (544)
Q Consensus 252 ~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v 330 (544)
.|+++++.. .+++..+++.++++++|++.++|+++..|++........++++|.+++||+++++++.+++.+.|+++.+
T Consensus 249 ~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i 328 (539)
T PRK06334 249 SGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQL 328 (539)
T ss_pred cCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeE
Confidence 999998875 4799999999999999999999999999988766555668899999999999999999999999988999
Q ss_pred eccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhh
Q 009077 331 GQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETT 410 (544)
Q Consensus 331 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~ 410 (544)
++.||+||++.+++... ........++|+|+++++++++|++++.+++.|+.|||+++|++++.||+++++.+...
T Consensus 329 ~~~YG~TE~~~~~~~~~----~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~ 404 (539)
T PRK06334 329 RQGYGTTECSPVITINT----VNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFV 404 (539)
T ss_pred EecccccccCceEEecc----CCCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccce
Confidence 99999999986655321 11122346789999999999999777889999999999999999999999988754332
Q ss_pred -cCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcce------eEEEeeeCCCCCceEEEE
Q 009077 411 -IDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISD------AAVVPMKDEAAGEVPVAF 483 (544)
Q Consensus 411 -~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~------~~v~~~~~~~~~~~~~~~ 483 (544)
.+.++||+|||+|+++++|++++.||.+|+||.+|++|+|.+||++|.++|+|.+ ++|++++++ ...++++
T Consensus 405 ~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~--~~~~~~~ 482 (539)
T PRK06334 405 ELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGE--KVRLCLF 482 (539)
T ss_pred eeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCC--ceEEEEE
Confidence 2357899999999999999999999999999999999999999999999999988 677766543 2344455
Q ss_pred EEecCCCCCCHHHHHHHHHhc-ccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 484 VVRSNGSKITEDEIKQYISKQ-VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 484 v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
++.. .+.++++++++.. ++.|+.|+.+.++++||+|++||++|++|++...
T Consensus 483 ~~~~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~ 534 (539)
T PRK06334 483 TTFP----TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAK 534 (539)
T ss_pred Eecc----CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHH
Confidence 4432 3567899999886 7889999999999999999999999999998754
No 18
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-69 Score=570.84 Aligned_cols=508 Identities=25% Similarity=0.372 Sum_probs=421.0
Q ss_pred CCH-HHHHHhhhccCCCccEEEeCCC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHh
Q 009077 25 LPL-HTYCFENISQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (544)
Q Consensus 25 ~~~-~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (544)
+|+ .+.|++.++++|+++|+++... .+.+||+||+++++++|++|+++|+++||+|+++++|++++++++|||++
T Consensus 66 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 145 (637)
T PRK00174 66 LNVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACAR 145 (637)
T ss_pred eEHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 444 4567788888999999987432 35899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh---------HHHHHHHhhc-Cc-EEEEeCCCC-------CCCcc
Q 009077 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN---------DKVRDLSEHH-GA-RIVTIDPPP-------ENCLH 161 (544)
Q Consensus 100 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~-~~-~~v~~~~~~-------~~~~~ 161 (544)
+|++++|++|.++.+++.++++.++++++|+++... ..+....... .. .++.++... .....
T Consensus 146 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (637)
T PRK00174 146 IGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLW 225 (637)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCccc
Confidence 999999999999999999999999999999976532 2222222221 22 233333211 12233
Q ss_pred HHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHh
Q 009077 162 FSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYS 241 (544)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 241 (544)
++++... .....+.....++++++++|||||||.||+|.++|.++......... ..+++.++|++++..|++|..+
T Consensus 226 ~~~~~~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~ 301 (637)
T PRK00174 226 WHELVAG-ASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMK---YVFDYKDGDVYWCTADVGWVTG 301 (637)
T ss_pred HHHHHhh-cCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHH---hccCCCCCcEEEEcCCchHhhh
Confidence 5555332 22222334567799999999999999999999999998655443322 1345788999999999999998
Q ss_pred hHHHHHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCH
Q 009077 242 LNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGK 315 (544)
Q Consensus 242 ~~~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~ 315 (544)
....++.++..|+++++.+. .++..+++.++++++|++.++|++++.|++.... ....++++|.++++|+++++
T Consensus 302 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~ 381 (637)
T PRK00174 302 HSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINP 381 (637)
T ss_pred hHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCH
Confidence 87788999999999998653 4789999999999999999999999999887543 23457899999999999999
Q ss_pred HHHHHHHHHCC--CCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEec
Q 009077 316 ELEDAVRAKLP--HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (544)
Q Consensus 316 ~~~~~~~~~~~--~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 393 (544)
++++++.+.++ ++.+++.||+||++....... ........+++|.|+++++++++| +++++++.|+.|||+++|
T Consensus 382 ~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~---~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g 457 (637)
T PRK00174 382 EAWEWYYKVVGGERCPIVDTWWQTETGGIMITPL---PGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKD 457 (637)
T ss_pred HHHHHHHHHhCCCCCceEecccccccCCceEecC---CCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcC
Confidence 99999999884 378999999999986544221 111223457899999999999999 578899999999999999
Q ss_pred --CcccccccCChhhhhhhc--CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEE
Q 009077 394 --AQIMKGYLNDREATETTI--DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVV 469 (544)
Q Consensus 394 --~~~~~gy~~~~~~~~~~~--~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~ 469 (544)
+++++||+++++.+...+ ..+|||+|||+++++++|++++.||+||+|+++|++|+|.+||++|.++|+|.+++|+
T Consensus 458 ~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vv 537 (637)
T PRK00174 458 PWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVV 537 (637)
T ss_pred CCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEE
Confidence 689999999998776654 3478999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceEEEEEEecCCCCCC---HHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 470 PMKDEAAGEVPVAFVVRSNGSKIT---EDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 470 ~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
+.+++..++.+++++++.++...+ .++|++++++.|+.++.|..++++++||+|++||++|++|++.+.+.
T Consensus 538 g~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 538 GRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred eeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 999998899999999988765544 46899999999999999999999999999999999999999987654
No 19
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-69 Score=563.28 Aligned_cols=505 Identities=30% Similarity=0.489 Sum_probs=426.0
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
..|+.+.|++.++++|+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||+++|+
T Consensus 23 ~~~~~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga 100 (562)
T PRK05677 23 YPNIQAVLKQSCQRFADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGL 100 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 358999999999999999999976 6899999999999999999997 5999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCC--------------------------
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPP-------------------------- 156 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~-------------------------- 156 (544)
+++|++|.++.+++.++++.++++++|++......+.+.......+.+.+....
T Consensus 101 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
T PRK05677 101 IVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYH 180 (562)
T ss_pred EEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccC
Confidence 999999999999999999999999999988766655444332233333222110
Q ss_pred -CCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCC-CCeEEEEec
Q 009077 157 -ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH-KEDVILCVL 234 (544)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 234 (544)
.....+.+.+..............++++++++|||||||.||+|.++|.++..........+. ..+. ..+.+++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~ 258 (562)
T PRK05677 181 LPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG--SNLNEGCEILIAPL 258 (562)
T ss_pred CcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc--cCCCCCccEEEEcC
Confidence 011223333222211122233456799999999999999999999999999876654433221 1123 346889999
Q ss_pred chhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccC
Q 009077 235 PLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPM 313 (544)
Q Consensus 235 p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l 313 (544)
|++|.+++...++..+..|+..++.. ..++..+++.++++++|++.++|+.+..+.+........++++|.+++||+++
T Consensus 259 pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~ 338 (562)
T PRK05677 259 PLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMAL 338 (562)
T ss_pred cHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccC
Confidence 99999998777778888888766654 57899999999999999999999999999876554445567999999999999
Q ss_pred CHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEec
Q 009077 314 GKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 393 (544)
++++.+.+++.+ ++++++.||+||++.++.... ......+++|.|+++++++++|+ ++.+++.|+.|||+++|
T Consensus 339 ~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~-----~~~~~~~~vG~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~g 411 (562)
T PRK05677 339 QLATAERWKEVT-GCAICEGYGMTETSPVVSVNP-----SQAIQVGTIGIPVPSTLCKVIDD-DGNELPLGEVGELCVKG 411 (562)
T ss_pred CHHHHHHHHHHc-CCCeeccCCccccCcceeecC-----ccCCCCCccCccCCCCEEEEECC-CCCCCCCCCCeEEEEec
Confidence 999999999988 899999999999987655431 12234568999999999999995 68899999999999999
Q ss_pred CcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeC
Q 009077 394 AQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKD 473 (544)
Q Consensus 394 ~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~ 473 (544)
+.++.||+++++.+...+..++||+|||+|+++++|++++.||++|+|+.+|.+|+|.+||+.|.++++|.+++|+++++
T Consensus 412 ~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~ 491 (562)
T PRK05677 412 PQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPD 491 (562)
T ss_pred CccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccC
Confidence 99999999999999888888999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 474 EAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 474 ~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
+..++.+++++++.++...+.++++++++.+++.|++|..++++++||+|++||++|++|++.+..
T Consensus 492 ~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~ 557 (562)
T PRK05677 492 EKSGEAIKVFVVVKPGETLTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELK 557 (562)
T ss_pred ccCCceEEEEEEeCCCCCCCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHH
Confidence 888889999998877777888999999999999999999999999999999999999999987643
No 20
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.7e-69 Score=559.53 Aligned_cols=503 Identities=31% Similarity=0.492 Sum_probs=434.5
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
..|+.+.|.+.++++|+++|+.+. ++.+||+||.+++.++|+.|.+. |+++|++|+++++|+++++++++||+++|+
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 86 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFY--GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANA 86 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeec--CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCc
Confidence 368999999999999999999987 78999999999999999999998 999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcE-EEEeCCC-------------------------C
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPP-------------------------P 156 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~v~~~~~-------------------------~ 156 (544)
+++|++|.++...+.++++.++++++++++.....+.........+ ++..+.. .
T Consensus 87 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (546)
T PRK08314 87 VVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAP 166 (546)
T ss_pred EEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccc
Confidence 9999999999999999999999999999988777665543322222 2211100 0
Q ss_pred CCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecch
Q 009077 157 ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL 236 (544)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 236 (544)
.....|++...... ........++++++++|||||||.||+|.++|.++...+..... .+.+.++|++++.+|+
T Consensus 167 ~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~ 240 (546)
T PRK08314 167 GGVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVL----WSNSTPESVVLAVLPL 240 (546)
T ss_pred cccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hhCCCCCceEEEEcCc
Confidence 12234444432211 12233456789999999999999999999999999887776554 3457889999999999
Q ss_pred hhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHH
Q 009077 237 FHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKE 316 (544)
Q Consensus 237 ~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~ 316 (544)
+|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|.++..++.........++++|.+++||++++++
T Consensus 241 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~ 320 (546)
T PRK08314 241 FHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEA 320 (546)
T ss_pred hHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHH
Confidence 99999988899999999999999989999999999999999999999999999877655556678999999999999999
Q ss_pred HHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcc
Q 009077 317 LEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQI 396 (544)
Q Consensus 317 ~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 396 (544)
+.+++.+.| +.++++.||+||++...... ........+.|.|+++++++++|++++..++.|+.|||+++|+++
T Consensus 321 ~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-----~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~ 394 (546)
T PRK08314 321 VAERLKELT-GLDYVEGYGLTETMAQTHSN-----PPDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQV 394 (546)
T ss_pred HHHHHHHHc-CCcEEecccccccccceecC-----CCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCch
Confidence 999999999 79999999999998655432 111234578999999999999998788999999999999999999
Q ss_pred cccccCChhhhhhhc---CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeC
Q 009077 397 MKGYLNDREATETTI---DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKD 473 (544)
Q Consensus 397 ~~gy~~~~~~~~~~~---~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~ 473 (544)
+.||++++..+...| +..+||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.++
T Consensus 395 ~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~ 474 (546)
T PRK08314 395 FKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPD 474 (546)
T ss_pred hccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCC
Confidence 999999988877665 23469999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceEEEEEEecCCC--CCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 474 EAAGEVPVAFVVRSNGS--KITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 474 ~~~~~~~~~~v~~~~~~--~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
...++.+++++++.++. ..+.+++.++++++++++++|+.++++++||+|.+||++|++|++..+.+
T Consensus 475 ~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~ 543 (546)
T PRK08314 475 PRRGETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKAR 543 (546)
T ss_pred cccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHhhh
Confidence 88889999999987653 35568999999999999999999999999999999999999999877654
No 21
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.7e-69 Score=571.80 Aligned_cols=503 Identities=26% Similarity=0.356 Sum_probs=407.8
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEe---CCCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 009077 22 PNHLPLHTYCFENISQFADRPCIIN---GPTG----DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (544)
+...|+.+.+++.++++|+++|+.+ .++. +.+||+||.++++++|++|.++|+++||+|+|+++|+++|++++
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 4457999999999999999999943 2211 46999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcEE-EEeCCCC-----------CCCcc
Q 009077 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GARI-VTIDPPP-----------ENCLH 161 (544)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~-v~~~~~~-----------~~~~~ 161 (544)
+||+++|+++||+++.++.+++.++++.++++++|++.+..+.+....... ..+. +.++... .....
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 200 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVT 200 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEE
Confidence 999999999999999999999999999999999999987766665544333 2333 3333211 01235
Q ss_pred HHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHh
Q 009077 162 FSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYS 241 (544)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 241 (544)
+++++........+.....++++++++|||||||.||+|.+||+++...+..... .+++.++|++++.+|++|.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~----~~~~~~~d~~l~~lPl~h~~~ 276 (651)
T PLN02736 201 YSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSL----STKFYPSDVHISYLPLAHIYE 276 (651)
T ss_pred HHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHh----ccCCCCCCEEEEeCCHHHHHH
Confidence 6666443322222233457899999999999999999999999999887776654 345788999999999999999
Q ss_pred hHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCC---------------------------
Q 009077 242 LNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--------------------------- 294 (544)
Q Consensus 242 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--------------------------- 294 (544)
++ .++.++..|+++++... ++..+++.++++++|++.++|.++..+.+...
T Consensus 277 ~~-~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (651)
T PLN02736 277 RV-NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALEN 354 (651)
T ss_pred HH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHc
Confidence 85 57778999999988764 78899999999999999999999988765310
Q ss_pred --CCC------------CCC-CCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCC
Q 009077 295 --VDK------------YDM-SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSG 359 (544)
Q Consensus 295 --~~~------------~~l-~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 359 (544)
... ..+ +++|.+++||+++++++.+++++.+ ++.+++.||+||++..++.. .......+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~-----~~~~~~~~ 428 (651)
T PLN02736 355 GKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGM-----DEGDNLSG 428 (651)
T ss_pred CCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheecc-----CCCCCCCC
Confidence 000 001 4799999999999999999999988 78999999999998655432 12234567
Q ss_pred eeeeccCCceEEEEcCCCCC---CCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEcc
Q 009077 360 ACGTVVRNAEMKIVDPDTGI---SLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDR 436 (544)
Q Consensus 360 ~~g~p~~~~~~~i~d~~~~~---~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR 436 (544)
++|+|+|+++++++|.+++. ....++.|||+++||+++.||+++++.+...++.+|||+|||+|++++||++++.||
T Consensus 429 ~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR 508 (651)
T PLN02736 429 HVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDR 508 (651)
T ss_pred ccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEe
Confidence 89999999999999843322 223345799999999999999999999998888899999999999999999999999
Q ss_pred ccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCC--------CCCCHHHHHHHHH-----
Q 009077 437 LKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNG--------SKITEDEIKQYIS----- 502 (544)
Q Consensus 437 ~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~l~~~l~----- 502 (544)
.+|+||+ +|++|+|.+||++|.++|.|.+++|++ ...++.++++|++.++ ...+.+++.++++
T Consensus 509 ~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g---~~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (651)
T PLN02736 509 KKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYG---DSLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVR 585 (651)
T ss_pred chhheEcCCCcEechHHHHHHHhcCCCeeEEEEEe---cCCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHH
Confidence 9999997 799999999999999999999999997 2356789999998643 1122122222221
Q ss_pred -------------hcccCCCcccEEEEecCCC------CCCCcccchHHHHhHHhh
Q 009077 503 -------------KQVVFYKRINRVFFTDSIP------KAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 503 -------------~~l~~~~~p~~~~~~~~lP------~t~~GK~~r~~l~~~~~~ 539 (544)
..|+.|++|++|+++++.| +|++||++|..++++|.+
T Consensus 586 ~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~ 641 (651)
T PLN02736 586 AAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAK 641 (651)
T ss_pred HHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHH
Confidence 2599999999999999886 699999999999998865
No 22
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-68 Score=564.83 Aligned_cols=513 Identities=23% Similarity=0.333 Sum_probs=419.7
Q ss_pred CCCH-HHHHHhhhccCCCccEEEeCC----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 24 HLPL-HTYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 24 ~~~~-~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
.+|+ .+.++++++.+|+++|+++.. ..+.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+
T Consensus 51 ~~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 130 (629)
T PRK10524 51 RTNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACA 130 (629)
T ss_pred EeeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 3454 566778888899999998732 24789999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch---------hHHHHHHHhh---cCcEEEEeCCCC-------CCC
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---------NDKVRDLSEH---HGARIVTIDPPP-------ENC 159 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~---~~~~~v~~~~~~-------~~~ 159 (544)
++|++++|++|.++.+.+.++++.++++++|+++.. .+.+.++... ....++.++... ...
T Consensus 131 ~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 210 (629)
T PRK10524 131 RIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRD 210 (629)
T ss_pred HhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCc
Confidence 999999999999999999999999999999997642 2333333322 133455554311 112
Q ss_pred ccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhH
Q 009077 160 LHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHI 239 (544)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 239 (544)
..+.++.........+.....++++++++|||||||.||+|.++|.++.......... .+++.++|++++..|++|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~ 287 (629)
T PRK10524 211 VDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDT---IFGGKAGETFFCASDIGWV 287 (629)
T ss_pred ccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHH---hcCCCCCCEEEEcCCCCee
Confidence 3455553322222223334567899999999999999999999999876544433221 3457889999999999999
Q ss_pred HhhHHHHHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccC
Q 009077 240 YSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPM 313 (544)
Q Consensus 240 ~g~~~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l 313 (544)
.+....++.++..|+++++... .++..+++.++++++|++.++|++++.+.+.... ....++++|.++++|+++
T Consensus 288 ~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l 367 (629)
T PRK10524 288 VGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPL 367 (629)
T ss_pred ccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCC
Confidence 8887788999999999998753 4788999999999999999999999998775432 234578999999999999
Q ss_pred CHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEec
Q 009077 314 GKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG 393 (544)
Q Consensus 314 ~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 393 (544)
++++++++.+.+ ++.+++.||+||++....... ..........++.|.|+++++++++|++++++++.|+.|||+++|
T Consensus 368 ~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~-~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~g 445 (629)
T PRK10524 368 DEPTASWISEAL-GVPVIDNYWQTETGWPILAIA-RGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEG 445 (629)
T ss_pred CHHHHHHHHHhc-CCCeEeccccccccchhhcCC-CCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcC
Confidence 999999999998 799999999999984322211 111112334578999999999999996588999999999999999
Q ss_pred C---cccccccCChhhhhhhc---CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeE
Q 009077 394 A---QIMKGYLNDREATETTI---DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAA 467 (544)
Q Consensus 394 ~---~~~~gy~~~~~~~~~~~---~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~ 467 (544)
| +...+|+++++.+...+ ..++||+|||+++++++|++++.||+||+|+++|.+|+|.+||++|.++|+|.+++
T Consensus 446 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~ 525 (629)
T PRK10524 446 PLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVA 525 (629)
T ss_pred CCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEE
Confidence 8 56789999887665543 24689999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeCCCCCceEEEEEEecCCCCCC--------HHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 468 VVPMKDEAAGEVPVAFVVRSNGSKIT--------EDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 468 v~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
|++++++..++.+++++++.++...+ .++|+++++++++.+++|..+++++.||+|++||++|+.|++.+.+
T Consensus 526 vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 605 (629)
T PRK10524 526 VVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEG 605 (629)
T ss_pred EEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcC
Confidence 99999988889999999987654322 4678999999999999999999999999999999999999998765
Q ss_pred cc
Q 009077 540 GD 541 (544)
Q Consensus 540 ~~ 541 (544)
..
T Consensus 606 ~~ 607 (629)
T PRK10524 606 RD 607 (629)
T ss_pred CC
Confidence 43
No 23
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-68 Score=549.26 Aligned_cols=491 Identities=28% Similarity=0.429 Sum_probs=428.1
Q ss_pred CHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 26 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.+.++++++|+.+|+++|++++ ++.+||+||+++++++|+.|.+ .|+++|++|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 80 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIA 80 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 5789999999999999999986 8999999999999999999985 799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcC-cEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCC
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-ARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (544)
+|+++.++.+.+..+++.++++++++++.....+........ ...+.+. +++++.... ........+++
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~~~ 150 (496)
T PRK06839 81 VPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISIT-------SLKEIEDRK---IDNFVEKNESA 150 (496)
T ss_pred EecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEec-------chHhhhccC---CCCCCCCCCCC
Confidence 999999999999999999999999999877666554433221 2233332 222221111 11222345689
Q ss_pred EEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcC
Q 009077 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (544)
Q Consensus 184 ~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~ 263 (544)
+++++|||||||.||+|.++|.++......... .+++..+++++..+|++|.+|+...++.++..|+++++.+.++
T Consensus 151 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 226 (496)
T PRK06839 151 SFIICYTSGTTGKPKGAVLTQENMFWNALNNTF----AIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFE 226 (496)
T ss_pred cEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHH----HcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCC
Confidence 999999999999999999999998765554443 3457889999999999999998777788999999999998899
Q ss_pred HHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccc
Q 009077 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVL 343 (544)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~ 343 (544)
+..+++.++++++|++.++|+++..+++........++++|.+++||+++++++.+.+++. ++++++.||+||++..+
T Consensus 227 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~ 304 (496)
T PRK06839 227 PTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTV 304 (496)
T ss_pred HHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcce
Confidence 9999999999999999999999999998876666678899999999999999999999886 79999999999998654
Q ss_pred cccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceE
Q 009077 344 SMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIG 423 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~ 423 (544)
... .........+++|+|+++++++++|+ ++..++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||++
T Consensus 305 ~~~---~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~ 379 (496)
T PRK06839 305 FML---SEEDARRKVGSIGKPVLFCDYELIDE-NKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLA 379 (496)
T ss_pred Eec---ccccccccCCCCcccCCCceEEEECC-CcCCCCCCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceE
Confidence 332 11222345678999999999999995 56679999999999999999999999998887776 68999999999
Q ss_pred EEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHh
Q 009077 424 YIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISK 503 (544)
Q Consensus 424 ~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 503 (544)
+++++|++++.||.+|+|+.+|.+|+|.+||+.|.++|+|.+++|++++++..++.+++++++.++...+.++++++++.
T Consensus 380 ~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~ 459 (496)
T PRK06839 380 RVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRL 459 (496)
T ss_pred EEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999888999999999988878888999999999
Q ss_pred cccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 504 QVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 504 ~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.++.+++|..+++++++|+|.+||++|.+|+++..+
T Consensus 460 ~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 460 FLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred hCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 999999999999999999999999999999998765
No 24
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.4e-68 Score=551.13 Aligned_cols=500 Identities=33% Similarity=0.542 Sum_probs=437.7
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.++.+.|.+.++.+|+++|+.+. ++.+||+||++.+.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVFG--DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 68999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcEEE-EeCCCCC-----CCccHHHHHhhccCCCCCcc
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GARIV-TIDPPPE-----NCLHFSELITQADENEIPAV 177 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~v-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 177 (544)
+|+++.++...+..+++.++++++++++............. ..+.+ .+..... ....|+++...... .....
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 161 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDP-AERAP 161 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCC-CCCcC
Confidence 99999999999999999999999999988776655543322 22222 2222111 12456666433221 12333
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
...++++++++|||||||.||+|.++|.++...+..... .+++.+++++++..|++|.+++...++.++..|++++
T Consensus 162 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 237 (513)
T PRK07656 162 EVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAE----YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATIL 237 (513)
T ss_pred CCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH----hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEE
Confidence 467799999999999999999999999999877766554 4468899999999999999999888999999999999
Q ss_pred EccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCC-ceeccccc
Q 009077 258 IMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHA-KLGQGYGM 336 (544)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~-~v~~~yG~ 336 (544)
+.+..++..+++.++++++|++.++|.++..+.+........++++|.++++|+++++++.+.+.+.| ++ .+++.||+
T Consensus 238 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~~YG~ 316 (513)
T PRK07656 238 PLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESEL-GVDIVLTGYGL 316 (513)
T ss_pred ecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHc-CCCceEeEEcc
Confidence 98888999999999999999999999999999998876666788999999999999999999999999 56 89999999
Q ss_pred cccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCc
Q 009077 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGW 416 (544)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 416 (544)
||++++++.+.... .......++|.|+++++++++| +.+.+++.|+.|||+++|+.+..||++++..+...+..++|
T Consensus 317 tE~~~~~~~~~~~~--~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 393 (513)
T PRK07656 317 SEASGVTTFNRLDD--DRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGW 393 (513)
T ss_pred ccCCCceeecCccc--cccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCc
Confidence 99987776553211 1112257899999999999999 46889999999999999999999999998888887767999
Q ss_pred eecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHH
Q 009077 417 LHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDE 496 (544)
Q Consensus 417 ~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 496 (544)
|+|||+|+++++|.+++.||.+|+|+.+|.++++.+||+.|.++++|.+++|++..++..++.++++++..++...+.++
T Consensus 394 ~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~ 473 (513)
T PRK07656 394 LHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEE 473 (513)
T ss_pred eeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999998888888999999988767788899
Q ss_pred HHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHh
Q 009077 497 IKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 497 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
+.++++..++.+++|..++++++||+|++||++|++|++
T Consensus 474 l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 474 LIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred HHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 999999999999999999999999999999999999975
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-68 Score=556.53 Aligned_cols=503 Identities=27% Similarity=0.423 Sum_probs=424.8
Q ss_pred CCCHH-HHHHhhhc-cCCCccEEEeCC--CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHh
Q 009077 24 HLPLH-TYCFENIS-QFADRPCIINGP--TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (544)
Q Consensus 24 ~~~~~-~~l~~~a~-~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (544)
.+++. +.+.++++ .+|+++|+.+.+ ..+.+||+||.++++++|+.|.++|+++|++|+++++|++++++++|||++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~ 120 (570)
T PRK04319 41 KVNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALK 120 (570)
T ss_pred ceeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 45555 57777776 479999998753 247899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCc-EEEEeCCCC---CCCccHHHHHhhccCCCCC
Q 009077 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGA-RIVTIDPPP---ENCLHFSELITQADENEIP 175 (544)
Q Consensus 100 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~v~~~~~~---~~~~~~~~~~~~~~~~~~~ 175 (544)
+|++++|+++.++.+++.++++.++++++++++......... ..... .++.++... .....+.+++.... ...+
T Consensus 121 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 198 (570)
T PRK04319 121 NGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD-DLPSLKHVLLVGEDVEEGPGTLDFNALMEQAS-DEFD 198 (570)
T ss_pred cCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh-cCCCceEEEEECCCcCCCcCccCHHHHHhhcC-CcCC
Confidence 999999999999999999999999999999987765433211 11122 333443321 23345666543322 2223
Q ss_pred ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 176 ~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
.....++++++++|||||||.||+|.++|.++......... .+++.++|++++..|++|..|....++.++..|++
T Consensus 199 ~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~ 274 (570)
T PRK04319 199 IEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKY----VLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGAT 274 (570)
T ss_pred ccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH----hcCCCCCceEEecCChHHhhCchHHHHHHHhcCce
Confidence 33456789999999999999999999999999877665544 34578899999999999999987889999999999
Q ss_pred EEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceec
Q 009077 256 ILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQ 332 (544)
Q Consensus 256 ~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~ 332 (544)
+++.. .+++..+++.++++++|++.++|+++..|.+.... ....++++|.++++|+++++++.+++++.+ +.++++
T Consensus 275 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~~ 353 (570)
T PRK04319 275 NVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIHD 353 (570)
T ss_pred EEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeEe
Confidence 98865 57999999999999999999999999999876532 234578999999999999999999999988 799999
Q ss_pred cccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEec--CcccccccCChhhhhhh
Q 009077 333 GYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG--AQIMKGYLNDREATETT 410 (544)
Q Consensus 333 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~ 410 (544)
.||+||++.++... ........+++|+|+|+++++++| +++.+++.|+.|||+++| ++++.||+++++.+...
T Consensus 354 ~YG~tE~~~~~~~~----~~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~ 428 (570)
T PRK04319 354 NWWMTETGGIMIAN----YPAMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESY 428 (570)
T ss_pred ceeecccCCEEEec----CCCCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhh
Confidence 99999998654321 111234567899999999999999 467788999999999997 89999999999998888
Q ss_pred cCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC
Q 009077 411 IDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS 490 (544)
Q Consensus 411 ~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 490 (544)
+ .+|||+|||+++++++|++++.||.+|+|+.+|++|+|.+||+.|.++|.|.+++|++.+++..++.+++++++.++.
T Consensus 429 ~-~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~ 507 (570)
T PRK04319 429 F-AGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGY 507 (570)
T ss_pred h-cCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCC
Confidence 7 489999999999999999999999999999999999999999999999999999999999988899999999987765
Q ss_pred CCCH---HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 491 KITE---DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 491 ~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.... +++.++++++++.|++|..++++++||+|++||++|++|+++..+
T Consensus 508 ~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~ 559 (570)
T PRK04319 508 EPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELG 559 (570)
T ss_pred CCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhC
Confidence 4433 689999999999999999999999999999999999999998653
No 26
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.7e-68 Score=551.36 Aligned_cols=490 Identities=25% Similarity=0.392 Sum_probs=416.8
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.++.+.|.++++++|+++|+++. ++.+||+||.++++++|++|.++|+++|++|+++++|+++++++++||+++|+++
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 120 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE--LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADI 120 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEE
Confidence 68999999999999999999976 6799999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc--CcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCC
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GARIVTIDPPPENCLHFSELITQADENEIPAVKINPD 182 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (544)
+|++|.++..++.++++.++++++|++......+....... ...++.++... ....++.+...... .. ....++
T Consensus 121 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~ 196 (537)
T PRK13382 121 LLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED-HDLTVEVLIAAHAG-QR--PEPTGR 196 (537)
T ss_pred EecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc-ccccHHHHhhccCc-CC--CCCCCC
Confidence 99999999999999999999999999987766554433221 12223332211 12344444322111 11 123467
Q ss_pred CEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCc
Q 009077 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKF 262 (544)
Q Consensus 183 ~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~ 262 (544)
+.++++|||||||.||+|.++|.++......... .+.+..+++++...|++|.+|+ ..++.++..|+++++...+
T Consensus 197 ~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~ 271 (537)
T PRK13382 197 KGRVILLTSGTTGTPKGARRSGPGGIGTLKAILD----RTPWRAEEPTVIVAPMFHAWGF-SQLVLAASLACTIVTRRRF 271 (537)
T ss_pred CCeEEEECCCCCCCCCEEEeccchHHHHHHHHHH----hhCCCCCCeEEEecChHhhhHH-HHHHHHHhcCcEEEECCCc
Confidence 8899999999999999999999888766665544 3346788999999999999998 6788889999999998889
Q ss_pred CHHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccC
Q 009077 263 DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (544)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~ 340 (544)
++..+++.++++++|++.++|+++..+++.... ....+.++|.+++||+++++++++.+.+.+ +..+++.||+||++
T Consensus 272 ~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~ 350 (537)
T PRK13382 272 DPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAG 350 (537)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccccccC
Confidence 999999999999999999999999999876532 223456899999999999999999999999 67899999999998
Q ss_pred ccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecC
Q 009077 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTG 420 (544)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~Tg 420 (544)
.++..+. .......+++|+|+++++++++|+ ++.+++.|+.|||+++|++++.||+ ++.+. .+ .+|||+||
T Consensus 351 ~~~~~~~----~~~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~-~~-~~g~~~TG 421 (537)
T PRK13382 351 MIATATP----ADLRAAPDTAGRPAEGTEIRILDQ-DFREVPTGEVGTIFVRNDTQFDGYT--SGSTK-DF-HDGFMASG 421 (537)
T ss_pred cceecCh----hHhccCCCCccccCcCcEEEEECC-CCCCCCCCCeeEEEEEcCCcccCcc--ccchh-hc-cCCCEeeC
Confidence 7655432 112234678999999999999995 6889999999999999999999997 22232 23 47999999
Q ss_pred ceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHH
Q 009077 421 DIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQY 500 (544)
Q Consensus 421 Dl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 500 (544)
|+++++++|++++.||++|+|+.+|++|++.+||+.|.++|+|.+++|++.+++..++.+++++++.++...+.++++++
T Consensus 422 Dl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~ 501 (537)
T PRK13382 422 DVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQH 501 (537)
T ss_pred ceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888899999999887767788999999
Q ss_pred HHhcccCCCcccEEEEecCCCCCCCcccchHHHHh
Q 009077 501 ISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 501 l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
++.+|+.+++|..+++++++|+|++||++|++|++
T Consensus 502 l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 502 VRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred HHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 99999999999999999999999999999999874
No 27
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-67 Score=554.16 Aligned_cols=506 Identities=31% Similarity=0.522 Sum_probs=432.9
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.+|+.+.+.++++++|+++|+.+. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 108 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF--GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAV 108 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 369999999999999999999986 788999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcE-EEEeCCC---------------------------
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPP--------------------------- 155 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~v~~~~~--------------------------- 155 (544)
++|++|.++.+.+.++++.++++++|+++.....+.+........ ++.++..
T Consensus 109 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
T PRK05605 109 VVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTG 188 (573)
T ss_pred EeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999887666555443322222 2222110
Q ss_pred -CCCCccHHHHHhhccCC---CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEE
Q 009077 156 -PENCLHFSELITQADEN---EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVIL 231 (544)
Q Consensus 156 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 231 (544)
......|+++....... ........++++++++|||||||.||+|.++|.++...+........ .+ ...+++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~-~~~~~~~~ 266 (573)
T PRK05605 189 PAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVP-GL-GDGPERVL 266 (573)
T ss_pred CCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhcc-cc-CCCCcEEE
Confidence 01223455543221111 01223456789999999999999999999999999877654332111 11 23478999
Q ss_pred EecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecc
Q 009077 232 CVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAA 311 (544)
Q Consensus 232 ~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~ 311 (544)
+..|++|.+|+...+..++..|+++++.+..++..+++.++++++|++.++|.++..|.+........++++|.++++|+
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~ 346 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAM 346 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCC
Confidence 99999999998777888899999999988889999999999999999999999999999887766677889999999999
Q ss_pred cCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCC-CCCCCCCCceeEE
Q 009077 312 PMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDT-GISLPRNQAGEIC 390 (544)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~-~~~~~~g~~Gel~ 390 (544)
++++++.+.+.+.+ +..+++.||+||++.++..+. .......+.+|.|++++.++++|+++ +.+++.|+.|||+
T Consensus 347 ~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~ 421 (573)
T PRK05605 347 ALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNP----MSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELL 421 (573)
T ss_pred cCCHHHHHHHHHHh-CCCeecccccchhchhhhcCC----cccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEE
Confidence 99999999999988 799999999999987655431 11223457899999999999999765 6889999999999
Q ss_pred EecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEe
Q 009077 391 IRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVP 470 (544)
Q Consensus 391 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~ 470 (544)
++|+.+..||++++..+...+ .+|||+|||+++++++|++++.||.+|+++.+|.+|+|.+||+++..++.|.+++|++
T Consensus 422 v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~ 500 (573)
T PRK05605 422 VRGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVG 500 (573)
T ss_pred EecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEe
Confidence 999999999999998888777 5679999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 471 MKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 471 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.+++..++.+++++++.++...+.++|++++++.++.+++|..++++++||+|++||++|++|++++..
T Consensus 501 ~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~ 569 (573)
T PRK05605 501 LPREDGSEEVVAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELLE 569 (573)
T ss_pred eecccCCeEEEEEEEECCCCCCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHHHH
Confidence 998888899999999887777888999999999999999999999999999999999999999998854
No 28
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-68 Score=551.94 Aligned_cols=512 Identities=23% Similarity=0.368 Sum_probs=420.7
Q ss_pred CCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHh
Q 009077 20 YIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (544)
Q Consensus 20 ~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (544)
..++..++.+.|.++++++|+++|+++.+..+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||++
T Consensus 11 ~~~~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 90 (534)
T PRK05852 11 ASDFGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASR 90 (534)
T ss_pred hhhhcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 34555789999999999999999998865557899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCC---CCCccHHHHHhhccCC-CCC
Q 009077 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPP---ENCLHFSELITQADEN-EIP 175 (544)
Q Consensus 100 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~-~~~ 175 (544)
+|++++|++|.++...+.++++.++++++|++..................+.+.... ...... ......... ...
T Consensus 91 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 169 (534)
T PRK05852 91 ADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSV-HLDAATEPTPATS 169 (534)
T ss_pred cCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeeccccccccccccc-ccccccCCCcccc
Confidence 999999999999999999999999999999976533221110000001111111110 000000 000000000 001
Q ss_pred ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 176 ~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
......++.++++|||||||.||+|.++|.++...+..... .+.+.++|++++.+|++|..+++..++.++..|++
T Consensus 170 ~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~ 245 (534)
T PRK05852 170 TPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIIT----GYRLSPRDATVAVMPLYHGHGLIAALLATLASGGA 245 (534)
T ss_pred ccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHH----HhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCe
Confidence 11122467899999999999999999999999887776655 34578899999999999999998889999999999
Q ss_pred EEEcc--CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCC--CCCCCCceEEEEecccCCHHHHHHHHHHCCCCcee
Q 009077 256 ILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD--KYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (544)
Q Consensus 256 ~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~--~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~ 331 (544)
++++. .+++..+++.++++++|++.++|.++..+.+..... ...++++|.+.++|+++++++++.+.+.| +.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~ 324 (534)
T PRK05852 246 VLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVV 324 (534)
T ss_pred EEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChh
Confidence 88854 468899999999999999999999999998865432 23467899999999999999999999999 89999
Q ss_pred ccccccccCcccccccccc---CCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhh
Q 009077 332 QGYGMTEAGPVLSMCLAFA---KEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATE 408 (544)
Q Consensus 332 ~~yG~tE~~~~~~~~~~~~---~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~ 408 (544)
+.||+||++.+++...... ........+..|. .++++++++|+ ++++++.|+.|||+++|+.+++||+++++.+.
T Consensus 325 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~-~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~ 402 (534)
T PRK05852 325 CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGS-DGLPLPAGAVGEVWLRGTTVVRGYLGDPTITA 402 (534)
T ss_pred hccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECC-CCCCCCCCCceEEEEecCcccchhcCCcccch
Confidence 9999999987655431110 0001112233344 68999999994 67899999999999999999999999999888
Q ss_pred hhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecC
Q 009077 409 TTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSN 488 (544)
Q Consensus 409 ~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 488 (544)
..+ .++||+|||++++++||++++.||.+|+|+.+|.++++.+||++|.++|+|.+++|++++++..++.++++++..+
T Consensus 403 ~~~-~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~ 481 (534)
T PRK05852 403 ANF-TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRE 481 (534)
T ss_pred hhh-cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECC
Confidence 877 6789999999999999999999999999999999999999999999999999999999998888899999999877
Q ss_pred CCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 489 GSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 489 ~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
+...+.+++.++++.+++.+++|..++++++||+|++||++|++|+++|..+
T Consensus 482 ~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~ 533 (534)
T PRK05852 482 SAPPTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGHS 533 (534)
T ss_pred CCCCCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhccc
Confidence 6667889999999999999999999999999999999999999999998653
No 29
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-67 Score=547.47 Aligned_cols=509 Identities=32% Similarity=0.510 Sum_probs=445.2
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhC
Q 009077 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (544)
+.+.++.+.|.++++.+|+++|+.+. ++.+||+||+++++++|+.|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G 80 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFD--GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIG 80 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 45579999999999999999999987 6779999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcC--cEEEEeCCCC-----CCCccHHHHHhhccCCCC
Q 009077 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG--ARIVTIDPPP-----ENCLHFSELITQADENEI 174 (544)
Q Consensus 102 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~ 174 (544)
++++|+++.++.+.+..+++.+++++++++....+.+.+...... .+++.++... .....+.+++... ....
T Consensus 81 ~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 159 (521)
T PRK06187 81 AVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAA-SDTF 159 (521)
T ss_pred eEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcC-CccC
Confidence 999999999999999999999999999999988777766655442 2444444332 3345566664332 2222
Q ss_pred CccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCc
Q 009077 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGA 254 (544)
Q Consensus 175 ~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~ 254 (544)
+.....++++++++|||||||.||++.++|.++......... .+++.+++++++..|++|..++...+. ++..|+
T Consensus 160 ~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~-~l~~G~ 234 (521)
T PRK06187 160 DFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA----WLKLSRDDVYLVIVPMFHVHAWGLPYL-ALMAGA 234 (521)
T ss_pred CCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH----hhCCCCCCEEEEeCCchHHhhHHHHHH-HHHhCC
Confidence 234566789999999999999999999999999877776655 456889999999999999988854444 999999
Q ss_pred EEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccc
Q 009077 255 AILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (544)
Q Consensus 255 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~y 334 (544)
++++.+..++..+++.++++++|++.++|+++..+.+........++++|.++++|+++++++++.+.+.| ++++++.|
T Consensus 235 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 313 (521)
T PRK06187 235 KQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGY 313 (521)
T ss_pred EEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchheee
Confidence 99999888999999999999999999999999999998877667789999999999999999999999999 89999999
Q ss_pred cccccCccccccccccCC-CCccCCCeeeeccCCceEEEEcCCCCCCCCC--CCceeEEEecCcccccccCChhhhhhhc
Q 009077 335 GMTEAGPVLSMCLAFAKE-PFEIKSGACGTVVRNAEMKIVDPDTGISLPR--NQAGEICIRGAQIMKGYLNDREATETTI 411 (544)
Q Consensus 335 G~tE~~~~~~~~~~~~~~-~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 411 (544)
|+||++.++..+...... .......+.|.|++++.++|+|+ ++.+++. |+.|||+++|+.+..||+++++.+...+
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~ 392 (521)
T PRK06187 314 GMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDD-DGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI 392 (521)
T ss_pred ccCccCcccccCCcccccccccccCCccccccCCeEEEEECC-CCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh
Confidence 999998766654211110 01135678999999999999995 5778888 9999999999999999999998888877
Q ss_pred CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCC
Q 009077 412 DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSK 491 (544)
Q Consensus 412 ~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 491 (544)
.++||+|||+++++++|.+++.||.+|+++.+|.++++.+||++|.++++|.+++|++.+++..++.+++++++.++..
T Consensus 393 -~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 471 (521)
T PRK06187 393 -DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGAT 471 (521)
T ss_pred -hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCC
Confidence 5779999999999999999999999999999999999999999999999999999999988888889999999888777
Q ss_pred CCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 492 ITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 492 ~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
.+.+++++++++.++.+.+|..+++++++|+|++||++|.+|+++|.+++
T Consensus 472 ~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~~ 521 (521)
T PRK06187 472 LDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEGK 521 (521)
T ss_pred CCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcCC
Confidence 88899999999999999999999999999999999999999999999874
No 30
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-68 Score=553.54 Aligned_cols=512 Identities=19% Similarity=0.246 Sum_probs=407.1
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
+.|+.+.|.+.|+++|+++|+++.++++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 13 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v 92 (540)
T PRK05857 13 PSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAI 92 (540)
T ss_pred CcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeE
Confidence 35899999999999999999987655678999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCC
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GARIVTIDPPPENCLHFSELITQADENEIPAVKINPD 182 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (544)
++|+++.++.+++.++++.++++++++++........+.... ....+.++....... ..+..... . ........++
T Consensus 93 ~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~~~~~ 169 (540)
T PRK05857 93 AVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRE-SEHSLDAA-S-LAGNADQGSE 169 (540)
T ss_pred EEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeeccccccc-cccccccc-c-cccccCCCCC
Confidence 999999999999999999999999999876532221111111 222333332111000 00000000 0 0112235678
Q ss_pred CEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCc
Q 009077 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKF 262 (544)
Q Consensus 183 ~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~ 262 (544)
++++++|||||||.||+|.++|+++.+............+....+++.++.+|++|..+++ ..+.++..|+++++ .+.
T Consensus 170 ~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G~~~v~-~~~ 247 (540)
T PRK05857 170 DPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMHGGLCVT-GGE 247 (540)
T ss_pred CeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhcceeEEe-cCC
Confidence 9999999999999999999999999766543222111123456788999999999999885 56778888988776 446
Q ss_pred CHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcc
Q 009077 263 DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPV 342 (544)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~ 342 (544)
++..+++.++++++|++.++|+++..+.+........++++|.+++||++++....+ +.+.+ ++++++.||+||++..
T Consensus 248 ~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~ 325 (540)
T PRK05857 248 NTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCT 325 (540)
T ss_pred ChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCce
Confidence 888999999999999999999999999887765566788999999999999887775 44566 8999999999999854
Q ss_pred ccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCC-----CCCCceeEEEecCcccccccCChhhhhhhcCCCCce
Q 009077 343 LSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISL-----PRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWL 417 (544)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~-----~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 417 (544)
...+............+++|+|+++++++|+|++...++ +.|+.|||+++|++++.||+++++.+...+ .+|||
T Consensus 326 ~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~ 404 (540)
T PRK05857 326 ALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWV 404 (540)
T ss_pred eeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCce
Confidence 332211100111224578999999999999996433222 457889999999999999999998888877 68999
Q ss_pred ecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCC-CHHH
Q 009077 418 HTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKI-TEDE 496 (544)
Q Consensus 418 ~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~ 496 (544)
+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||.+|..+|.|.+++|+++++...++.++++++..++... ..++
T Consensus 405 ~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~ 484 (540)
T PRK05857 405 NTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARA 484 (540)
T ss_pred eccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHH
Confidence 999999999999999999999999999999999999999999999999999999988878888888776543221 1233
Q ss_pred ----HHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcccC
Q 009077 497 ----IKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 497 ----l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
+.+++++.++.+++|..+++++++|+|++||++|++|++.+.+.+.|
T Consensus 485 l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 535 (540)
T PRK05857 485 LKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATADKAR 535 (540)
T ss_pred HHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhccce
Confidence 44455677899999999999999999999999999999999887654
No 31
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-67 Score=547.56 Aligned_cols=504 Identities=29% Similarity=0.472 Sum_probs=438.7
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
..++.+++..+++.+|+++|+.+. ++.+||+||++++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~ 87 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFG--DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAV 87 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 368999999999999999999987 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCC------CCCCCccHHHHHhhccCCCCCcc
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDP------PPENCLHFSELITQADENEIPAV 177 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 177 (544)
++|+++.++.+.+.++++.+++++++++......+.+.........+.... .......+.++.... .......
T Consensus 88 ~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 166 (523)
T PRK08316 88 HVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAG-SVAEPDV 166 (523)
T ss_pred EEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcC-CCccCcc
Confidence 999999999999999999999999999988877766544332211111111 112233444442221 1112334
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
....+++++++|||||||.||+|.++|.++......... .+++.++++++..+|++|..++...++.++..|++++
T Consensus 167 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~ 242 (523)
T PRK08316 167 ELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIV----AGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNV 242 (523)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----HhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEE
Confidence 466789999999999999999999999999877665544 3457889999999999999998777788899999999
Q ss_pred EccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccccc
Q 009077 258 IMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT 337 (544)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~t 337 (544)
+.+..++..+++.++++++|++.++|.++..+.+........++++|.+++||+.++.++.+.+++.|+++++++.||+|
T Consensus 243 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~t 322 (523)
T PRK08316 243 ILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQT 322 (523)
T ss_pred EecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeeccc
Confidence 99888999999999999999999999999999988766666788999999999999999999999999889999999999
Q ss_pred ccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCce
Q 009077 338 EAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWL 417 (544)
Q Consensus 338 E~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 417 (544)
|++.++..+.. .......++.|+|+++++++++| +++.+++.|+.|||+++|+.+..||+++++.+...+ .++||
T Consensus 323 E~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~ 397 (523)
T PRK08316 323 EIAPLATVLGP---EEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWF 397 (523)
T ss_pred ccCccccccCc---cccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCe
Confidence 99976655321 12223457889999999999999 468899999999999999999999999998888777 78999
Q ss_pred ecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHH
Q 009077 418 HTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEI 497 (544)
Q Consensus 418 ~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 497 (544)
+|||+|+++++|.+++.||.+|+|+.+|++++|.+||+.|.++++|.+++|++..++..++.+++++++.++...+.+++
T Consensus 398 ~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 477 (523)
T PRK08316 398 HSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDEL 477 (523)
T ss_pred eccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999887766778899
Q ss_pred HHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 498 KQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 498 ~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.+++++.++.+++|..+++++++|+|++||++|++|+++|.+
T Consensus 478 ~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~ 519 (523)
T PRK08316 478 IAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAG 519 (523)
T ss_pred HHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHh
Confidence 999999999999999999999999999999999999999864
No 32
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.8e-68 Score=556.29 Aligned_cols=503 Identities=22% Similarity=0.334 Sum_probs=405.4
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCC--------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTG--------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
+|+.+.+.+.++++|+++|+++.+.+ +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la 85 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFA 85 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 68899999999999999999886332 2899999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecc--hhHHHHHHHhhcCcEEEEeCCC-CCCCccHHHHHhhccCCC
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV--YNDKVRDLSEHHGARIVTIDPP-PENCLHFSELITQADENE 173 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~ 173 (544)
|+++|++++|++|.++.+++.++++.++++++|+++. ....+...........+.++.. ......++++........
T Consensus 86 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 165 (552)
T PRK09274 86 LFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDGAAAP 165 (552)
T ss_pred HHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhcccCcccc
Confidence 9999999999999999999999999999999998752 2222211110011122222221 112234555432221222
Q ss_pred CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhC
Q 009077 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (544)
Q Consensus 174 ~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g 253 (544)
.......++++++++|||||||.||+|.++|.++...+..... .+++.++++.++.+|++|.+++ ..|
T Consensus 166 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~pl~~~~~~--------~~g 233 (552)
T PRK09274 166 FPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALRE----DYGIEPGEIDLPTFPLFALFGP--------ALG 233 (552)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHH----HhCCCCCceeeeccCHHHhhhh--------hhC
Confidence 2233456789999999999999999999999999887776654 3457889999999999876543 347
Q ss_pred cEEEEcc-------CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCC
Q 009077 254 AAILIMQ-------KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLP 326 (544)
Q Consensus 254 ~~~v~~~-------~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~ 326 (544)
.++++.. .+++..+++.++++++|++.++|+++..|.+........++++|.+++||+++++++.+.+++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~ 313 (552)
T PRK09274 234 MTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLP 313 (552)
T ss_pred CeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcC
Confidence 7776653 357899999999999999999999999999876655667889999999999999999999999996
Q ss_pred -CCceeccccccccCccccccccccC----CC-CccCCCeeeeccCCceEEEEcCC--------CCCCCCCCCceeEEEe
Q 009077 327 -HAKLGQGYGMTEAGPVLSMCLAFAK----EP-FEIKSGACGTVVRNAEMKIVDPD--------TGISLPRNQAGEICIR 392 (544)
Q Consensus 327 -~~~v~~~yG~tE~~~~~~~~~~~~~----~~-~~~~~~~~g~p~~~~~~~i~d~~--------~~~~~~~g~~Gel~v~ 392 (544)
++++++.||+||++.+++....... .. ......++|+|+++++++|+|+. ++.+++.|+.|||+++
T Consensus 314 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~ 393 (552)
T PRK09274 314 PDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVA 393 (552)
T ss_pred CCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEEe
Confidence 4799999999999876543211100 00 11123468999999999999852 4577899999999999
Q ss_pred cCcccccccCChhhhhhhc--CCCC--ceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEE
Q 009077 393 GAQIMKGYLNDREATETTI--DKEG--WLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAV 468 (544)
Q Consensus 393 ~~~~~~gy~~~~~~~~~~~--~~~~--~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 468 (544)
|+.++.||+++++.+...+ +.+| ||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|
T Consensus 394 g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v 473 (552)
T PRK09274 394 GPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSAL 473 (552)
T ss_pred cCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeEE
Confidence 9999999999998887654 3456 99999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCC---CcccEEEEecCCCCC--CCcccchHHHHhHHhhc
Q 009077 469 VPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFY---KRINRVFFTDSIPKA--PSGKILRKDLRTKLAAG 540 (544)
Q Consensus 469 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~---~~p~~~~~~~~lP~t--~~GK~~r~~l~~~~~~~ 540 (544)
++++++. ++.++++|++.++...+.+++.++++..+..+ +.|..++++++||+| .+||++|++|++++..+
T Consensus 474 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 474 VGVGVPG-AQRPVLCVELEPGVACSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAKQ 549 (552)
T ss_pred EEeCCCC-CceEEEEEEccCccccchHHHhhhhHHHHHhcCCCcceeEEeccCCCCccccccccccHHHHHHHHHHh
Confidence 9988754 56788888888776666666777766655544 567789999999999 79999999999988764
No 33
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.5e-67 Score=550.50 Aligned_cols=511 Identities=29% Similarity=0.509 Sum_probs=435.9
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
...++.++|.+.++.+|+++|+++.+.++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 14 ~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~ 93 (559)
T PRK08315 14 LEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGA 93 (559)
T ss_pred hhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCe
Confidence 34799999999999999999999876678999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchh-----HHHHHHHhhc---------------CcEEEEeCCC-CCCCcc
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEHH---------------GARIVTIDPP-PENCLH 161 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~---------------~~~~v~~~~~-~~~~~~ 161 (544)
+++|++|.++...+..+++.++++++++++... ..+.+..... ...++.++.. ......
T Consensus 94 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (559)
T PRK08315 94 ILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPGMLN 173 (559)
T ss_pred EEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCccccc
Confidence 999999999999999999999999999987542 2222221111 1122222221 122345
Q ss_pred HHHHHhhccC---C--CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecch
Q 009077 162 FSELITQADE---N--EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPL 236 (544)
Q Consensus 162 ~~~~~~~~~~---~--~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 236 (544)
+.++...... . ........++++++++|||||||.||+|.++|.++...+..... .+++.++++++...|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~ 249 (559)
T PRK08315 174 FDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGE----AMKLTEEDRLCIPVPL 249 (559)
T ss_pred HHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHH----hcCCCCCceEEEecCc
Confidence 5555322210 0 11122356789999999999999999999999999887776654 3458899999999999
Q ss_pred hhHHhhHHHHHHHHHhCcEEEE-ccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCH
Q 009077 237 FHIYSLNSVLLCALRVGAAILI-MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGK 315 (544)
Q Consensus 237 ~~~~g~~~~~~~~l~~g~~~v~-~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~ 315 (544)
+|..+++..++.++..|+++++ ...+++..+++.++++++|++.++|+++..++.........++++|.++++|+++++
T Consensus 250 ~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~ 329 (559)
T PRK08315 250 YHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPI 329 (559)
T ss_pred HHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCH
Confidence 9999998889999999999984 456799999999999999999999999998887766555678899999999999999
Q ss_pred HHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCc
Q 009077 316 ELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQ 395 (544)
Q Consensus 316 ~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 395 (544)
++.+.+.+.|+..++++.||+||++.+++.+... ........++|.|+++++++++|++++++++.|+.|||+++|+.
T Consensus 330 ~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~ 407 (559)
T PRK08315 330 EVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTD--DPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYS 407 (559)
T ss_pred HHHHHHHHHcCCcceeEEEcccccccceeecCcc--cchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECch
Confidence 9999999999666799999999998765543221 12223467889999999999999876899999999999999999
Q ss_pred ccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCC
Q 009077 396 IMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEA 475 (544)
Q Consensus 396 ~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~ 475 (544)
+..||++++..+...+..++||+|||+++++++|.+++.||.+|+|+.+|.++++.+||++|.++++|.+++|+++.++.
T Consensus 408 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~ 487 (559)
T PRK08315 408 VMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVGVPDEK 487 (559)
T ss_pred hhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEecCCCC
Confidence 99999999988888777889999999999999999999999999999999999999999999999999999999998887
Q ss_pred CCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 476 AGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 476 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.++.++++|++.++...+.+++++++++.++.|++|..++++++||+|.+||++|.+|++++..
T Consensus 488 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 488 YGEEVCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred CCeEEEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHh
Confidence 7888999998887777788999999999999999999999999999999999999999988654
No 34
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3e-67 Score=545.59 Aligned_cols=500 Identities=25% Similarity=0.405 Sum_probs=426.9
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
.+.|+.++|+++++.+|+++|+++. ++.+||+||.+++.++|..|.++|+++|++|+++++|+++++++++||+++|+
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~ 96 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVFG--GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGA 96 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCC
Confidence 4578999999999999999999986 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc--CcEEEEeCCCCCC--CccHHHHHhhccCCCCCccC
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GARIVTIDPPPEN--CLHFSELITQADENEIPAVK 178 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 178 (544)
+++|+++.++.+++.++++.+++++++++.+....+....... ..+++.++..... ...+................
T Consensus 97 ~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (542)
T PRK06155 97 IAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLDAPAPAAA 176 (542)
T ss_pred EEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccCCCCCCCC
Confidence 9999999999999999999999999999988776665443221 1234444432210 01111110000111112234
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..++++++++|||||||.||+|.++|.++......... .+++.+++++++.+|++|..++ ..++.++..|+++++
T Consensus 177 ~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~~~-~~~~~~l~~G~~~~~ 251 (542)
T PRK06155 177 VQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAE----DLEIGADDVLYTTLPLFHTNAL-NAFFQALLAGATYVL 251 (542)
T ss_pred CCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHH----hcCCCCCCEEEEecCHHHHHHH-HHHHHHHHcCceEEe
Confidence 56789999999999999999999999999876655544 3458899999999999999988 467899999999999
Q ss_pred ccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccc
Q 009077 259 MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTE 338 (544)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE 338 (544)
.+.+++..++..++++++|++.++|+++..|.+.........++++.++.+| +++++.+.+++.+ ++.+++.||+||
T Consensus 252 ~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE 328 (542)
T PRK06155 252 EPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTE 328 (542)
T ss_pred eCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccc
Confidence 9989999999999999999999999999999887766555667888776554 6789999999998 899999999999
Q ss_pred cCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecC---cccccccCChhhhhhhcCCCC
Q 009077 339 AGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA---QIMKGYLNDREATETTIDKEG 415 (544)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~ 415 (544)
++.++..+ ......+.+|.|.++++++|+| +++.+++.|+.|||+++|+ .++.||+++++.+...+ .++
T Consensus 329 ~~~~~~~~------~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~ 400 (542)
T PRK06155 329 TNFVIAVT------HGSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNL 400 (542)
T ss_pred cCccccCC------CCCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCC
Confidence 98765532 1133557889999999999999 4688999999999999998 68999999998887777 689
Q ss_pred ceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHH
Q 009077 416 WLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITED 495 (544)
Q Consensus 416 ~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 495 (544)
||+|||+++++++|++++.||.+|+|+.+|.+++|.+||++|.++|+|.+++|++++++..++.+.+++++.++...+..
T Consensus 401 ~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~ 480 (542)
T PRK06155 401 WFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPV 480 (542)
T ss_pred cEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999988888888888888877788889
Q ss_pred HHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 496 EIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 496 ~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
+++++++++++.+++|..+.+++++|+|++||++|++|++++...
T Consensus 481 ~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 525 (542)
T PRK06155 481 ALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGVTA 525 (542)
T ss_pred HHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhccCC
Confidence 999999999999999999999999999999999999999977543
No 35
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=6e-67 Score=541.04 Aligned_cols=498 Identities=28% Similarity=0.418 Sum_probs=433.8
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.++.+++.+++ .+|+++|+.+. .++.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETP-DGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 58899999999 99999999874 36899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcE-EEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCC
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (544)
+|+++.++..++..+++.++++++++++...+.+.......... ++.++.... ..+.+.... ...........+++
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~ 157 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGT--GSLLEAAAA-APDDFETVPRGADD 157 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCc--ccHHHhhhh-cCcccCcccCCCCC
Confidence 99999999999999999999999999988877766654443333 444443211 122222111 11112233456799
Q ss_pred EEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcC
Q 009077 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (544)
Q Consensus 184 ~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~ 263 (544)
+++++|||||||.||++.++|.++...+..... .+++.+++++++..|++|..|++..++.++..|+++++.+..+
T Consensus 158 ~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~ 233 (504)
T PRK07514 158 LAAILYTSGTTGRSKGAMLSHGNLLSNALTLVD----YWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFD 233 (504)
T ss_pred eEEEEECCCCCCCCcEEEEecHHHHHHHHHHHH----HhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCC
Confidence 999999999999999999999999887766554 3457889999999999999998778889999999999999899
Q ss_pred HHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccc
Q 009077 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVL 343 (544)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~ 343 (544)
+..+++.+. ++|++.++|.++.++++........++++|.+++||+++++++.+.+.+.+ ++++++.||+||++.+.
T Consensus 234 ~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 310 (504)
T PRK07514 234 PDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNT 310 (504)
T ss_pred HHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccccccc
Confidence 999999993 799999999999999988766666678999999999999999999999988 78999999999998544
Q ss_pred cccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceE
Q 009077 344 SMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIG 423 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~ 423 (544)
... ........+.|.|+++++++++|++++++++.|+.|||+++|+.++.||++++..+...+..++||+|||++
T Consensus 311 ~~~-----~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~ 385 (504)
T PRK07514 311 SNP-----YDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLG 385 (504)
T ss_pred cCC-----ccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceE
Confidence 321 112234567899999999999998889999999999999999999999999999988888779999999999
Q ss_pred EEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHh
Q 009077 424 YIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISK 503 (544)
Q Consensus 424 ~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 503 (544)
+++++|.+++.||++|+|+.+|.++++.+||+.+.++++|.+++|+++++...++.++++++..++...+.+++.+++++
T Consensus 386 ~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 465 (504)
T PRK07514 386 KIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALKG 465 (504)
T ss_pred EEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988888888999999887777788999999999
Q ss_pred cccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 504 QVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 504 ~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.++.+++|..+++++++|+|++||++|.+|++++.+
T Consensus 466 ~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~ 501 (504)
T PRK07514 466 RLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYAD 501 (504)
T ss_pred hcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHh
Confidence 999999999999999999999999999999998764
No 36
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.8e-67 Score=542.79 Aligned_cols=511 Identities=29% Similarity=0.452 Sum_probs=435.9
Q ss_pred CCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 009077 18 DIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (544)
Q Consensus 18 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (544)
+++...-+|+.+.+..+++.+|+++|+.+. ++.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||
T Consensus 10 ~~~~~~~~n~~~~~~~~a~~~~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~ 87 (542)
T PRK07786 10 QPYLARRQNWVNQLARHALMQPDAPALRFL--GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAA 87 (542)
T ss_pred CCCcccccCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 455666789999999999999999999987 789999999999999999999999999999999999999999999999
Q ss_pred HhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcE-EEEeCC-CCCCCccHHHHHhhccCCCC
Q 009077 98 SYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GAR-IVTIDP-PPENCLHFSELITQADENEI 174 (544)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~-~v~~~~-~~~~~~~~~~~~~~~~~~~~ 174 (544)
+++|++++|+++.++..++.++++.+++++++++....+.+....... ..+ ++.++. .......++++...... ..
T Consensus 88 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 166 (542)
T PRK07786 88 NMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGP-AH 166 (542)
T ss_pred HHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCC-CC
Confidence 999999999999999999999999999999999987766554433221 222 333332 12234566666433222 22
Q ss_pred CccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccC-CCCeEEEEecchhhHHhhHHHHHHHHHhC
Q 009077 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL-HKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (544)
Q Consensus 175 ~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~g 253 (544)
+......+++++++|||||||.||+|.++|.++...+......+ ++ ..++++++..|++|.+|+ ..++.++..|
T Consensus 167 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G 241 (542)
T PRK07786 167 APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN----GADINSDVGFVGVPLFHIAGI-GSMLPGLLLG 241 (542)
T ss_pred CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc----CCCCCCceEEEecchHHHHHH-HHHHHHHHcc
Confidence 23345668899999999999999999999999987776654432 23 568899999999999988 6788899999
Q ss_pred cEEEEcc--CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCcee
Q 009077 254 AAILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (544)
Q Consensus 254 ~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~ 331 (544)
+++++.+ .+++..+++.++++++|++.++|+++..+.......... .++|.+++||+++++++++.+.+.|++.+++
T Consensus 242 ~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~ 320 (542)
T PRK07786 242 APTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQIL 320 (542)
T ss_pred CEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEE
Confidence 9998865 578999999999999999999999999998876543332 3789999999999999999999999899999
Q ss_pred ccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhc
Q 009077 332 QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTI 411 (544)
Q Consensus 332 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 411 (544)
+.||+||++.+.+.+. .........++|.|++++.++++| +++..++.|+.|||+++|+.+.+||+++++.+...+
T Consensus 321 ~~YG~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f 396 (542)
T PRK07786 321 AAFGQTEMSPVTCMLL---GEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF 396 (542)
T ss_pred eeecccccccceEecC---cccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh
Confidence 9999999987655432 122233457889999999999999 567889999999999999999999999999888877
Q ss_pred CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC-
Q 009077 412 DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS- 490 (544)
Q Consensus 412 ~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~- 490 (544)
.++||+|||+++++++|.+++.||.+|+|+.+|.++++.+||++|.++++|.+++|++..++..++.+++++++.++.
T Consensus 397 -~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 475 (542)
T PRK07786 397 -AGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDA 475 (542)
T ss_pred -hCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCC
Confidence 689999999999999999999999999999999999999999999999999999999988877788888888876543
Q ss_pred CCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhccc
Q 009077 491 KITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDL 542 (544)
Q Consensus 491 ~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 542 (544)
....+++.+++++.++.|++|..++++++||+|++||++|.+|++++.+.+.
T Consensus 476 ~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 527 (542)
T PRK07786 476 ALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVN 527 (542)
T ss_pred CCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhc
Confidence 3667899999999999999999999999999999999999999999987654
No 37
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.5e-67 Score=554.49 Aligned_cols=511 Identities=21% Similarity=0.257 Sum_probs=413.7
Q ss_pred CCCCCCCCHHHHHHhhhccCCCccEEEeCCC---CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHH
Q 009077 19 IYIPNHLPLHTYCFENISQFADRPCIINGPT---GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFL 95 (544)
Q Consensus 19 ~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 95 (544)
+..-...|+.+.+.++ .+|+++|+++.++ .+++||+||.++++++|+.|.++|+++||+|+++++|++++++++|
T Consensus 80 wf~~~~~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~l 157 (655)
T PRK03584 80 WFPGARLNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAML 157 (655)
T ss_pred eCCCCEeeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3333446777777653 6899999987532 2689999999999999999999999999999999999999999999
Q ss_pred HHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch---------hHHHHHHHhhc-C-cEEEEeCCC--------C
Q 009077 96 GASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---------NDKVRDLSEHH-G-ARIVTIDPP--------P 156 (544)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~-~-~~~v~~~~~--------~ 156 (544)
||+++|++++|++|.++.+.+.++++.++++++|+++.. .+.+.++.... . ..++.++.. .
T Consensus 158 A~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 237 (655)
T PRK03584 158 ATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAAL 237 (655)
T ss_pred HHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCccccccc
Confidence 999999999999999999999999999999999998653 22333332222 1 234444321 1
Q ss_pred CCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHH-HHHhhhcCCCCccCCCCeEEEEecc
Q 009077 157 ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTS-VAQQVDGENPNLYLHKEDVILCVLP 235 (544)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~p 235 (544)
.....|++++..............++++++++|||||||.||+|.++|.++... ...... .+++.++|++++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~~d~~~~~~~ 313 (655)
T PRK03584 238 PGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGL----HCDLGPGDRFFWYTT 313 (655)
T ss_pred CCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHH----hcCCCCCCEEEEcCC
Confidence 123456666442222223334567799999999999999999999999987543 322222 345788999999999
Q ss_pred hhhHHhhHHHHHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCC--CCCCCCCCceEEEEe
Q 009077 236 LFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSG 309 (544)
Q Consensus 236 ~~~~~g~~~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~l~~~~~~ 309 (544)
+.|..+. .++.++..|+++++.++ .++..+++.++++++|++..+|+++..+.+... .....++++|.++++
T Consensus 314 ~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~ 391 (655)
T PRK03584 314 CGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGST 391 (655)
T ss_pred chHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEe
Confidence 8887543 46689999999998753 479999999999999999999999999876532 223567899999999
Q ss_pred cccCCHHHHHHHHHHC-CCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCcee
Q 009077 310 AAPMGKELEDAVRAKL-PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGE 388 (544)
Q Consensus 310 G~~l~~~~~~~~~~~~-~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Ge 388 (544)
|+++++++.+++.+.+ +++.+.+.||+||++...... ........+++|.|.++++++++| +++.++ .|+.||
T Consensus 392 Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~----~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~Ge 465 (655)
T PRK03584 392 GSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGG----NPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGE 465 (655)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccC----CCCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceE
Confidence 9999999999999988 368899999999986432211 111223457889999999999999 467777 789999
Q ss_pred EEEecC--cccccccCChhhhh--hhc--CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCC
Q 009077 389 ICIRGA--QIMKGYLNDREATE--TTI--DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPN 462 (544)
Q Consensus 389 l~v~~~--~~~~gy~~~~~~~~--~~~--~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~ 462 (544)
|+++|+ +++.||+++++.+. ..+ ..++||+|||+|++++||++++.||+||+||.+|++|++.+||++|.++|.
T Consensus 466 L~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~ 545 (655)
T PRK03584 466 LVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPE 545 (655)
T ss_pred EEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCC
Confidence 999996 78899999886443 111 125789999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeeeCCCCCceEEEEEEecCCCCCCH---HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 463 ISDAAVVPMKDEAAGEVPVAFVVRSNGSKITE---DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 463 v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
|.+++|++++++..++.++++|++.++...+. ++++++++++|+.+++|..|+++++||+|++||++|+.|++.+.+
T Consensus 546 V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~ 625 (655)
T PRK03584 546 VLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHG 625 (655)
T ss_pred cceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcC
Confidence 99999999999888999999999987655554 589999999999999999999999999999999999999999887
Q ss_pred cccC
Q 009077 540 GDLR 543 (544)
Q Consensus 540 ~~~~ 543 (544)
.+..
T Consensus 626 ~~~~ 629 (655)
T PRK03584 626 RPVK 629 (655)
T ss_pred CCCC
Confidence 6543
No 38
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-67 Score=542.91 Aligned_cols=508 Identities=30% Similarity=0.470 Sum_probs=428.5
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.+|+.+++.+.++++|+++|+.+. ++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 6 ~~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 83 (528)
T PRK07470 6 VMNLAHFLRQAARRFPDRIALVWG--DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAV 83 (528)
T ss_pred CCCHHHHHHHHHHHCCCceEEEEC--CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeE
Confidence 478999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc--CcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCC
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (544)
++++++.++.+.+.++++.++++.+++++.....+....... ...++.++.. .....+.+++..............+
T Consensus 84 ~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (528)
T PRK07470 84 WVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGA-RAGLDYEALVARHLGARVANAAVDH 162 (528)
T ss_pred EEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCC-cccccHHHHHhcCCCCCCCcccCCC
Confidence 999999999999999999999999999987765554443322 1233444332 2234566654332222223345677
Q ss_pred CCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-
Q 009077 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ- 260 (544)
Q Consensus 182 ~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~- 260 (544)
+++++++|||||||.||+|.++|.++...+........ .+..+.|+++..+|++|..++. .++ .+..|++.++.+
T Consensus 163 ~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g~~~~~~~~ 238 (528)
T PRK07470 163 DDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM--PGTTEQDASLVVAPLSHGAGIH-QLC-QVARGAATVLLPS 238 (528)
T ss_pred CCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc--cCCCcccEEEEeccchhHHHHH-HHH-HHhcCceEEEecc
Confidence 99999999999999999999999998765543322111 1357789999999999998884 444 456666666554
Q ss_pred -CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccccccc
Q 009077 261 -KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (544)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~ 339 (544)
.+++..+++.++++++|++.++|+++..+.+........++++|.++++|++++++..+++.+.+ +..+++.||+||+
T Consensus 239 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~ 317 (528)
T PRK07470 239 ERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEV 317 (528)
T ss_pred cCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCccc
Confidence 47899999999999999999999999999987766666788999999999999999999999988 7889999999999
Q ss_pred CccccccccccC---CCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCc
Q 009077 340 GPVLSMCLAFAK---EPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGW 416 (544)
Q Consensus 340 ~~~~~~~~~~~~---~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 416 (544)
+..+..+..... .......+++|.|+++++++++| +++.+++.|+.|||+++|+.++.||+++++.+...+ .++|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~~~~ 395 (528)
T PRK07470 318 TGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF-RDGW 395 (528)
T ss_pred CCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-cCCc
Confidence 866554321100 11123457889999999999999 478899999999999999999999999998887777 6899
Q ss_pred eecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHH
Q 009077 417 LHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDE 496 (544)
Q Consensus 417 ~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 496 (544)
|+|||+++++++|++++.||.||+|+.+|.+++|.+||..|.++++|.+++|++.+++..++.++++++..++...+.++
T Consensus 396 ~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (528)
T PRK07470 396 FRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVDEAE 475 (528)
T ss_pred EecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999998888888889998887776688899
Q ss_pred HHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 497 IKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 497 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
+++++++.|+.+++|..++++++||+|++||++|+.|++++++.-
T Consensus 476 ~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 520 (528)
T PRK07470 476 LLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERG 520 (528)
T ss_pred HHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999887653
No 39
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=7.8e-67 Score=551.59 Aligned_cols=510 Identities=19% Similarity=0.251 Sum_probs=405.8
Q ss_pred CCCCCCCCHHHHHHhhhccCCCccEEEeCCC---CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHH
Q 009077 19 IYIPNHLPLHTYCFENISQFADRPCIINGPT---GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFL 95 (544)
Q Consensus 19 ~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 95 (544)
+......|+...+.++ .++++|+++.++ .+.+||+||.+++.++|+.|++.|+++||+|+++++|++++++++|
T Consensus 81 wf~~~~~n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~l 157 (652)
T TIGR01217 81 WFPGARLNYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAML 157 (652)
T ss_pred ECCCCeeeHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3334456777776653 568899877532 2589999999999999999999999999999999999999999999
Q ss_pred HHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch---------hHHHHHHHhhc-C-cEEEEeCCCC--------
Q 009077 96 GASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---------NDKVRDLSEHH-G-ARIVTIDPPP-------- 156 (544)
Q Consensus 96 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~-~-~~~v~~~~~~-------- 156 (544)
||+++|++++|++|.++.+++.+++++++++++|+++.. .+.+.++.... . ..++.++...
T Consensus 158 A~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 237 (652)
T TIGR01217 158 ATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPK 237 (652)
T ss_pred HHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccccc
Confidence 999999999999999999999999999999999998753 23444433322 1 2344432111
Q ss_pred -CCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecc
Q 009077 157 -ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLP 235 (544)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p 235 (544)
.....|++++..............++++++++|||||||.||+|+++|.++......... ..+++.++|++++..|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~---~~~~~~~~d~~~~~~~ 314 (652)
T TIGR01217 238 IDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHG---LHCDLGPGDRLFYYTT 314 (652)
T ss_pred ccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHH---hccCCCCCcEEEEeCC
Confidence 123456666433222222233456789999999999999999999999987543322211 1346889999999999
Q ss_pred hhhHHhhHHHHHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCC--CCCCCCCCceEEEEe
Q 009077 236 LFHIYSLNSVLLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSG 309 (544)
Q Consensus 236 ~~~~~g~~~~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~l~~~~~~ 309 (544)
++|..+ ..++.++..|+++++.+. .++..++++++++++|++...|.+++.+.+... ....+++++|.++++
T Consensus 315 ~~~~~~--~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~g 392 (652)
T TIGR01217 315 TGWMMW--NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVAST 392 (652)
T ss_pred cchhhh--HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEee
Confidence 999753 235589999999999753 378899999999999999888887777665421 233467899999999
Q ss_pred cccCCHHHHHHHHHHCC-CCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCcee
Q 009077 310 AAPMGKELEDAVRAKLP-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGE 388 (544)
Q Consensus 310 G~~l~~~~~~~~~~~~~-~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Ge 388 (544)
|+++++++.+++.+.++ +..+.+.||+||++...... ........+++|.|.++++++++|+ ++.++ .|+.||
T Consensus 393 Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~----~~~~~~~~g~~g~p~~g~~v~ivd~-~g~~~-~g~~GE 466 (652)
T TIGR01217 393 GSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGA----NPTLPVHIGEIQAPGLGTAVQSWDP-EGKPV-TGEVGE 466 (652)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCC----CCCCCCcCCccCCCcCCCceEEECC-CCCCC-CCCccE
Confidence 99999999999998883 35677899999975322211 1111234577899999999999994 67777 589999
Q ss_pred EEEecC--cccccccCChhhhh--hh-c-CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCC
Q 009077 389 ICIRGA--QIMKGYLNDREATE--TT-I-DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPN 462 (544)
Q Consensus 389 l~v~~~--~~~~gy~~~~~~~~--~~-~-~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~ 462 (544)
|+++|+ +++.||+++++.+. .. + ..+|||+|||+|++++||++++.||+||+|+.+|++|+|.+||++|.++|.
T Consensus 467 l~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~ 546 (652)
T TIGR01217 467 LVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDE 546 (652)
T ss_pred EEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCC
Confidence 999996 58899999987543 12 2 136899999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeeeCCCCCceEEEEEEecCCCCCCH---HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 463 ISDAAVVPMKDEAAGEVPVAFVVRSNGSKITE---DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 463 v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
|.+++|++++++..++.++++|++.++...+. ++|+++++++|+.+++|+.+++++.||+|++||++|+.|++.+.+
T Consensus 547 V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~ 626 (652)
T TIGR01217 547 VRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQG 626 (652)
T ss_pred cceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcC
Confidence 99999999999999999999999987765554 589999999999999999999999999999999999999999865
Q ss_pred ccc
Q 009077 540 GDL 542 (544)
Q Consensus 540 ~~~ 542 (544)
.+.
T Consensus 627 ~~~ 629 (652)
T TIGR01217 627 TPV 629 (652)
T ss_pred CCC
Confidence 543
No 40
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.9e-67 Score=538.17 Aligned_cols=481 Identities=31% Similarity=0.506 Sum_probs=416.9
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
+|++++|+++++++|+++|+++. ++.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFE--EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVA 79 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEE
Confidence 68999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCE
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (544)
+|+++.++.+.+..+++.++++.++++........... ...++++...............++++
T Consensus 80 v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (483)
T PRK03640 80 VLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI----------------SVKFAELMNGPKEEAEIQEEFDLDEV 143 (483)
T ss_pred EecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc----------------cccHHHHhhcccccCCCCCCCCCCCe
Confidence 99999999999999999999999999876554432211 01133332221122222334567899
Q ss_pred EEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCH
Q 009077 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (544)
Q Consensus 185 ~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~ 264 (544)
++++|||||||.||+|.++|.++...+..... .+++.++|+++..+|++|.+++ ..++.++..|+++++.+..++
T Consensus 144 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~ 218 (483)
T PRK03640 144 ATIMYTSGTTGKPKGVIQTYGNHWWSAVGSAL----NLGLTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLVEKFDA 218 (483)
T ss_pred EEEEeCCCcCCCCcEEEEecHHHHHHHHHHHH----hcCCCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEecCCCCH
Confidence 99999999999999999999998877655544 3457899999999999999988 557888999999999999999
Q ss_pred HHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcccc
Q 009077 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (544)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~ 344 (544)
..+++.++++++|++.++|+++..|.+..... ....++|.++++|+++++...+.+++. ++++++.||+||++..+.
T Consensus 219 ~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~ 295 (483)
T PRK03640 219 EKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIV 295 (483)
T ss_pred HHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCccccccc
Confidence 99999999999999999999999998765433 234689999999999999999988874 899999999999875433
Q ss_pred ccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEE
Q 009077 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGY 424 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~ 424 (544)
.. .........++.|+|++++++++.++ +.+++.|+.|||+++|+.++.||+++++.+...+ .++||+|||+++
T Consensus 296 ~~---~~~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~ 369 (483)
T PRK03640 296 TL---SPEDALTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGY 369 (483)
T ss_pred cc---CcccccccCCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEE
Confidence 22 12223345678999999999999984 3789999999999999999999999998888877 689999999999
Q ss_pred EcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhc
Q 009077 425 IDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQ 504 (544)
Q Consensus 425 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 504 (544)
++++|++++.||++|+++.+|.++++.+||+.+.++++|.++++++..++..++.++++++.. ...+.+++++++++.
T Consensus 370 ~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~ 447 (483)
T PRK03640 370 LDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKS--GEVTEEELRHFCEEK 447 (483)
T ss_pred EcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeC--CCCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999988887788888877754 467889999999999
Q ss_pred ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 505 VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 505 l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
++.+++|+.++++++||+|++||++|++|++++.+
T Consensus 448 l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 448 LAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred ccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 99999999999999999999999999999999874
No 41
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-67 Score=538.35 Aligned_cols=483 Identities=24% Similarity=0.394 Sum_probs=413.9
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
|++.+.|.++++++|+++|+.+. +..+||.||.++++++|++|.+.|. +|++|+|+++|++++++++|||+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 77 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN--DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTC 77 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC--CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 57889999999999999999986 7899999999999999999999884 89999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCE
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (544)
+|+++.++.+++.++++.++++.++++......+.. ....++.++ .+.+..... ...........+++
T Consensus 78 v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~ 145 (487)
T PRK07638 78 VPLDIKWKQDELKERLAISNADMIVTERYKLNDLPD----EEGRVIEID-------EWKRMIEKY-LPTYAPIENVQNAP 145 (487)
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEecccccchhh----ccceEEEeh-------hhhhhhhhc-cccccccccCCCCc
Confidence 999999999999999999999999999865544332 122333332 122221111 11111122335678
Q ss_pred EEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCH
Q 009077 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (544)
Q Consensus 185 ~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~ 264 (544)
++++|||||||.||+|.++|.++...+..... .+++.++|+++...|++|..++ ..++.++..|+++++.+.+++
T Consensus 146 a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~~~~ 220 (487)
T PRK07638 146 FYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVH----DFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRKFIP 220 (487)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCCCCH
Confidence 99999999999999999999999887766554 4457889999999999998776 677889999999999999999
Q ss_pred HHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcccc
Q 009077 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (544)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~ 344 (544)
..+++.++++++|++.++|+++..+.+.... ..+.+.++++|+++++++.+++.+.|+++++++.||+||++.++.
T Consensus 221 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 296 (487)
T PRK07638 221 NQVLDKLETENISVMYTVPTMLESLYKENRV----IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTA 296 (487)
T ss_pred HHHHHHHHHcCCeEEEeCcHHHHHHHhCcCc----CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEE
Confidence 9999999999999999999999999887321 345667788999999999999999998999999999999997655
Q ss_pred ccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEE
Q 009077 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGY 424 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~ 424 (544)
.+. ........+.|.|+++++++|+| +++.+++.|+.|||+++|+.+..||++++..+.... .+|||+|||+++
T Consensus 297 ~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~ 370 (487)
T PRK07638 297 LVD----EESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGY 370 (487)
T ss_pred ecc----cccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEe
Confidence 431 12234567899999999999999 468899999999999999999999999987665544 789999999999
Q ss_pred EcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhc
Q 009077 425 IDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQ 504 (544)
Q Consensus 425 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 504 (544)
++++|++++.||++|+|+.+|.+|+|.+||++|.++|+|.+++|++..++..++.++++++. ..+.+++++++++.
T Consensus 371 ~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~----~~~~~~l~~~~~~~ 446 (487)
T PRK07638 371 EDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG----SATKQQLKSFCLQR 446 (487)
T ss_pred EcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC----CCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888888888764 35778999999999
Q ss_pred ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 505 VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 505 l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
++.+++|..+++++++|+|++||++|++|++++.+.+
T Consensus 447 l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~ 483 (487)
T PRK07638 447 LSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQE 483 (487)
T ss_pred hhcccCCcEEEEecccCCCCcccccHHHHHHHHhccc
Confidence 9999999999999999999999999999999987654
No 42
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-66 Score=542.88 Aligned_cols=509 Identities=28% Similarity=0.488 Sum_probs=433.3
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.++.+.|.+.++++|+++|+++.+.++.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 18 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 97 (558)
T PRK12583 18 QTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAIL 97 (558)
T ss_pred CcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEE
Confidence 68999999999999999999987667899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchh-----HHHHHHHhhc--------------C-cEEEEeCCC-CCCCccHH
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEHH--------------G-ARIVTIDPP-PENCLHFS 163 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~--------------~-~~~v~~~~~-~~~~~~~~ 163 (544)
+++++.++.+++.++++.++++++++++... ..+....... . ...+..+.. ......|+
T Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (558)
T PRK12583 98 VNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGFLAWH 177 (558)
T ss_pred EecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCccccchH
Confidence 9999999999999999999999999976432 1222211110 0 112222211 11223444
Q ss_pred HHHhhccCC-----CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhh
Q 009077 164 ELITQADEN-----EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFH 238 (544)
Q Consensus 164 ~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 238 (544)
+........ ........++++++++|||||||.||+|.++|.++...+..... .+++.++|++++..|++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~ 253 (558)
T PRK12583 178 ELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAE----SLGLTEHDRLCVPVPLYH 253 (558)
T ss_pred hhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHH----HhCCCCCCeEEEecCchh
Confidence 442221110 01122345789999999999999999999999999887776554 345788999999999999
Q ss_pred HHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHH
Q 009077 239 IYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKEL 317 (544)
Q Consensus 239 ~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~ 317 (544)
.+|.+..++.++..|+++++.. ..++..+++.++++++|++.++|+++..+++........++++|.++++|+++++++
T Consensus 254 ~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~ 333 (558)
T PRK12583 254 CFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEV 333 (558)
T ss_pred hhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHH
Confidence 9999888999999999998654 578999999999999999999999999888776655566889999999999999999
Q ss_pred HHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCccc
Q 009077 318 EDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIM 397 (544)
Q Consensus 318 ~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 397 (544)
.+.+.+.++...+++.||+||++.++..+... ........++|.|++++.++++|++ +.+++.|+.|||+++|+.++
T Consensus 334 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~--~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~ 410 (558)
T PRK12583 334 MRRVMDEMHMAEVQIAYGMTETSPVSLQTTAA--DDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVM 410 (558)
T ss_pred HHHHHHHcCCcceeccccccccccceeccCcc--cccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccc
Confidence 99999999777899999999999776544221 1223345789999999999999975 88999999999999999999
Q ss_pred ccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCC
Q 009077 398 KGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAG 477 (544)
Q Consensus 398 ~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~ 477 (544)
.||++++..+...++.++||+|||+++++++|++++.||.+|+|+.+|.+|++.+||+.|.++++|.+++|++++++..+
T Consensus 411 ~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~ 490 (558)
T PRK12583 411 KGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYG 490 (558)
T ss_pred hhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCC
Confidence 99999999888877788999999999999999999999999999999999999999999999999999999999988888
Q ss_pred ceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 478 EVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 478 ~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
+.+++++++.++...+.++++++++++|+.+++|..++++++||+|++||++|++|+++....
T Consensus 491 ~~~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~~ 553 (558)
T PRK12583 491 EEIVAWVRLHPGHAASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIEE 553 (558)
T ss_pred cEEEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHhh
Confidence 999999998877677889999999999999999999999999999999999999999987653
No 43
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.5e-67 Score=556.63 Aligned_cols=507 Identities=21% Similarity=0.292 Sum_probs=397.7
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeCC---C--C--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 009077 22 PNHLPLHTYCFENISQFADRPCIINGP---T--G--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~~---~--~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (544)
+...|+.+.+.+.++++|+++|+.+.+ + + ..+||+||.++++++|++|.++|+++||+|+|+++|+++|++++
T Consensus 42 ~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~ 121 (666)
T PLN02614 42 EGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISM 121 (666)
T ss_pred CCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 344599999999999999999997421 1 1 35899999999999999999999999999999999999999999
Q ss_pred HHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc---CcEEEEeCCCCC-----------CCc
Q 009077 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH---GARIVTIDPPPE-----------NCL 160 (544)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~v~~~~~~~-----------~~~ 160 (544)
|||+++|+++||+++.++.+++.+++++++++++|++......+....... ...++.++.... ...
T Consensus 122 lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~ 201 (666)
T PLN02614 122 EACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIY 201 (666)
T ss_pred HHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEE
Confidence 999999999999999999999999999999999999877655443322211 123444443110 123
Q ss_pred cHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCC-CCccCCCCeEEEEecchhhH
Q 009077 161 HFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN-PNLYLHKEDVILCVLPLFHI 239 (544)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~ 239 (544)
.+++++........+.....++++++++|||||||.||+|.+||+++...+......+. ....+.++|++++.+|++|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 202 AWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred EHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHH
Confidence 56665433221111222346799999999999999999999999999887665443221 01246789999999999999
Q ss_pred HhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCC------------------------
Q 009077 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV------------------------ 295 (544)
Q Consensus 240 ~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~------------------------ 295 (544)
++.. ....++..|+++++.+ .++..+++.++++++|++.++|+++..+.+....
T Consensus 282 ~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9884 4566788999988865 5899999999999999999999999887642100
Q ss_pred ---------CC-----------CCC-CCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCC
Q 009077 296 ---------DK-----------YDM-SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (544)
Q Consensus 296 ---------~~-----------~~l-~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~ 354 (544)
.. ..+ +++|.+++||+++++++ ..+.+.++++.+++.||+||++.+.+... ...
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~----~~~ 434 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSL----PDE 434 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeec----ccc
Confidence 00 001 57999999999999876 55666665699999999999875433211 111
Q ss_pred ccCCCeeeeccCCceEEEEcC-C-CCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEE
Q 009077 355 EIKSGACGTVVRNAEMKIVDP-D-TGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELF 432 (544)
Q Consensus 355 ~~~~~~~g~p~~~~~~~i~d~-~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~ 432 (544)
....+++|+|+|+++++|+|. + .+.+++.|+.|||+++|++++.||+++++.+...+ .+|||+|||+|++|+||+++
T Consensus 435 ~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~ 513 (666)
T PLN02614 435 LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLHTGDVGEWQPNGSMK 513 (666)
T ss_pred CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCcccceEEEEcCCCCEE
Confidence 224578999999999999983 2 24678899999999999999999999999999888 58999999999999999999
Q ss_pred EEccccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC--------CC--C--------
Q 009077 433 IVDRLKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS--------KI--T-------- 493 (544)
Q Consensus 433 ~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~--~-------- 493 (544)
+.||++|+||+ +|++|+|.+||++|.++|.|.+++|++..+ ...++|+|++.... .. +
T Consensus 514 i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~---~~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (666)
T PLN02614 514 IIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSF---ESFLVAIANPNQQILERWAAENGVSGDYNALCQNE 590 (666)
T ss_pred EEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCC---cceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCH
Confidence 99999999996 799999999999999999999999998542 34688888876421 00 1
Q ss_pred --HHHHHHHH-----HhcccCCCcccEEEEecC-C-----CCCCCcccchHHHHhHHhh
Q 009077 494 --EDEIKQYI-----SKQVVFYKRINRVFFTDS-I-----PKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 494 --~~~l~~~l-----~~~l~~~~~p~~~~~~~~-l-----P~t~~GK~~r~~l~~~~~~ 539 (544)
.+.+.+.+ +..|+.+.+++.|.+++. + .+|+++|++|..+.+.|.+
T Consensus 591 ~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~ 649 (666)
T PLN02614 591 KAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQS 649 (666)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHH
Confidence 11223333 356999999999988863 2 4899999999999999875
No 44
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-67 Score=563.27 Aligned_cols=480 Identities=25% Similarity=0.375 Sum_probs=406.5
Q ss_pred CHHHHHHhhhcc--CCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 26 PLHTYCFENISQ--FADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 26 ~~~~~l~~~a~~--~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
|+.+++.+.++. +||++|+.+. ..+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~ 81 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA---DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVM 81 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec---CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcE
Confidence 788999988875 7999999864 47999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhcc-CCCCCccCCCCC
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQAD-ENEIPAVKINPD 182 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 182 (544)
++|++|.++..++.++++.++++++|++......+... .++ ...+++.... ..........++
T Consensus 82 ~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 145 (705)
T PRK06060 82 AFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS------RVA----------EAAELMSEAARVAPGGYEPMGGD 145 (705)
T ss_pred EEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc------ccc----------hhhhhhhhccccCCCCCCCCCCC
Confidence 99999999999999999999999999987654432210 000 1111111100 011112234678
Q ss_pred CEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-C
Q 009077 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-K 261 (544)
Q Consensus 183 ~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~ 261 (544)
++++++|||||||.||+|.++|.++.......... .+++.+++++++..|++|.+++...++.++..|+++++.+ .
T Consensus 146 ~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~ 222 (705)
T PRK06060 146 ALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRK---ALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAP 222 (705)
T ss_pred CeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHH---hhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCC
Confidence 99999999999999999999999998776544321 2457889999999999999888677888999999999876 4
Q ss_pred cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCc
Q 009077 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGP 341 (544)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~ 341 (544)
+++..++..+.++++|++.++|+++.++++.... ..++++|.+++||+++++++.+++.+.|+++++++.||+||++.
T Consensus 223 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 300 (705)
T PRK06060 223 VTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP--DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQ 300 (705)
T ss_pred CCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc--ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCc
Confidence 6888899999999999999999999999876532 34678999999999999999999999997799999999999985
Q ss_pred cccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCc
Q 009077 342 VLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGD 421 (544)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD 421 (544)
++..+ .......+++|+|+++++++++|+ ++.+++.|+.|||+++|++++.||+++++.+. ..++||+|||
T Consensus 301 ~~~~~-----~~~~~~~~~iG~p~~~~~v~i~d~-~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGD 371 (705)
T PRK06060 301 TFVSN-----RVDEWRLGTLGRVLPPYEIRVVAP-DGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRD 371 (705)
T ss_pred eEEec-----cCCCCCcCcccccCCCcEEEEECC-CCCCCCCCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCe
Confidence 54322 111234578899999999999994 68889999999999999999999999887643 3679999999
Q ss_pred eEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCH---HHHH
Q 009077 422 IGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITE---DEIK 498 (544)
Q Consensus 422 l~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~ 498 (544)
+|+++++|++++.||.||+||++|++|++.+||+.|.+++.|.+++|+++++...++.+++++++.++...+. ++++
T Consensus 372 l~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~ 451 (705)
T PRK06060 372 RVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLH 451 (705)
T ss_pred eEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998888889999998776544443 4788
Q ss_pred HHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 499 QYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 499 ~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
++++++|+.|++|..++++++||+|++||++|++|++.+.
T Consensus 452 ~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 452 RGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred HHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhcc
Confidence 8999999999999999999999999999999999998764
No 45
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.5e-66 Score=539.87 Aligned_cols=498 Identities=27% Similarity=0.423 Sum_probs=420.8
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
...|+.+++.++++++|+++|+++. ++.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~ 98 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICG--NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGI 98 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCe
Confidence 3578999999999999999999986 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhH-----HHHHHHhhc-CcEEEEeCCCCCCCccHHHHHhhccCCCCCc
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYND-----KVRDLSEHH-GARIVTIDPPPENCLHFSELITQADENEIPA 176 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (544)
+++++++..+.+.+.++++.+++++++++..... ......... ..+.+.+.............+.... ...+.
T Consensus 99 ~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 177 (527)
T TIGR02275 99 APVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESPA-EPVKF 177 (527)
T ss_pred EEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCcC-ccccC
Confidence 9999999999999999999999999999865421 122221111 2233333221111111222211111 11222
Q ss_pred cCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHH-HHHHHHHhCcE
Q 009077 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNS-VLLCALRVGAA 255 (544)
Q Consensus 177 ~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~g~~ 255 (544)
....++++++++|||||||.||+|.++|.++...+..... .+.+.+++++++.+|++|.+++.. .++.++..|++
T Consensus 178 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~ 253 (527)
T TIGR02275 178 PPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE----ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGC 253 (527)
T ss_pred CCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh----hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCe
Confidence 3456799999999999999999999999999887776554 345788999999999999998854 47888999999
Q ss_pred EEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
+++.+.+++..+++.++++++|++.++|.++..+.+........++++|.+++||+++++++.+.+.+.+ +.++++.||
T Consensus 254 ~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG 332 (527)
T TIGR02275 254 VVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFG 332 (527)
T ss_pred EEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeec
Confidence 9998888999999999999999999999999999888766666788999999999999999999999998 899999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeecc-CCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCC
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKE 414 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 414 (544)
+||++.... . ..........+.|.|+ ++..++++| +++.+++.|+.|||+++|+.++.||+++++.+...++.+
T Consensus 333 ~tE~~~~~~-~---~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~d 407 (527)
T TIGR02275 333 MAEGLVNYT-R---LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAE 407 (527)
T ss_pred cCccCcccc-C---CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcC
Confidence 999653221 1 1111223446789999 488999999 568889999999999999999999999999998888889
Q ss_pred CceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCH
Q 009077 415 GWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITE 494 (544)
Q Consensus 415 ~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 494 (544)
+||+|||+++++++|++++.||.+|+|+.+|.++++.+||++|.++|+|.+++|++..++..++.+++++++.++ ..+.
T Consensus 408 g~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~-~~~~ 486 (527)
T TIGR02275 408 GFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDP-ALKA 486 (527)
T ss_pred CCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCC-CCCH
Confidence 999999999999999999999999999999999999999999999999999999999998888899999988654 4678
Q ss_pred HHHHHHHHhc-ccCCCcccEEEEecCCCCCCCcccchHHHH
Q 009077 495 DEIKQYISKQ-VVFYKRINRVFFTDSIPKAPSGKILRKDLR 534 (544)
Q Consensus 495 ~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 534 (544)
++++++++.+ ++.+++|..+.++++||+|++||++|++|+
T Consensus 487 ~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 487 AQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred HHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 8999999975 999999999999999999999999999874
No 46
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-66 Score=536.17 Aligned_cols=495 Identities=27% Similarity=0.432 Sum_probs=426.3
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
+++.+.+.++++.+|+++|+.+. ++.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYR--DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVF 79 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 57889999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCE
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (544)
+|+++.++.+.+.++++.++++.+++++....... .....+.++..... .+..+ ..............++++
T Consensus 80 v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~ 151 (497)
T PRK06145 80 LPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVA-----LETPKIVIDAAAQA--DSRRL-AQGGLEIPPQAAVAPTDL 151 (497)
T ss_pred EecccccCHHHHHHHHHhcCCcEEEEccchhhhhh-----cccceEEecCcccc--hhHHH-hccCCCCCCCCCCCccce
Confidence 99999999999999999999999999877644321 11122233221111 11111 111111112234567899
Q ss_pred EEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCH
Q 009077 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (544)
Q Consensus 185 ~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~ 264 (544)
++++|||||||.||+|.++|.++......... .+++..+++++...|++|.+++....+.++..|+++++.+.+++
T Consensus 152 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 227 (497)
T PRK06145 152 VRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVI----ALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDP 227 (497)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCH
Confidence 99999999999999999999998765544333 34578999999999999999887777788999999999988999
Q ss_pred HHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcccc
Q 009077 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (544)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~ 344 (544)
..+++.++++++|++.++|+++..++.........++++|.+++||+++++++++.+.+.|++..+++.||+||++...+
T Consensus 228 ~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~ 307 (497)
T PRK06145 228 EAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDT 307 (497)
T ss_pred HHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcce
Confidence 99999999999999999999999999877655566789999999999999999999999998899999999999987544
Q ss_pred ccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEE
Q 009077 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGY 424 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~ 424 (544)
... ........++.|.|+++++++++|+ ++..++.|+.|||+++|+.++.||++++..+...+ .++||+|||+++
T Consensus 308 ~~~---~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~ 382 (497)
T PRK06145 308 LME---AGREIEKIGSTGRALAHVEIRIADG-AGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGY 382 (497)
T ss_pred ecc---CccccccCCCcccCCCCceEEEECC-CCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEE
Confidence 321 1112234567899999999999994 67889999999999999999999999999888877 689999999999
Q ss_pred EcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhc
Q 009077 425 IDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQ 504 (544)
Q Consensus 425 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 504 (544)
++++|++++.||++|+|+.+|.++++.+||+.|.++++|.+++|++..++..++.+++++++.++...+.+++.++++++
T Consensus 383 ~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 462 (497)
T PRK06145 383 LDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQR 462 (497)
T ss_pred EcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988888899999998877777889999999999
Q ss_pred ccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 505 VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 505 l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
++.+++|..++++++||+|++||++|++|++++.
T Consensus 463 l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 463 LASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred hhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 9999999999999999999999999999999765
No 47
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-66 Score=543.42 Aligned_cols=503 Identities=27% Similarity=0.399 Sum_probs=408.3
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.|+.+++.+.++.+|+++|+++. +.++||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|+++
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~ 91 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYG--KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVL 91 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEE
Confidence 57999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-------CcEEEEeCCCCC------CCccHHHHHhhccC
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-------GARIVTIDPPPE------NCLHFSELITQADE 171 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~------~~~~~~~~~~~~~~ 171 (544)
+|++|.++.+++.++++.++++++|++++..+.+..+.... ..+++.++.... ...++.+++.....
T Consensus 92 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (579)
T PLN03102 92 NPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEP 171 (579)
T ss_pred eeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCC
Confidence 99999999999999999999999999888776665543321 234555543211 12345555332221
Q ss_pred CCCC----ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHH
Q 009077 172 NEIP----AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLL 247 (544)
Q Consensus 172 ~~~~----~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 247 (544)
.... .....++++++++|||||||.||+|.++|.++......... ...+...++++..+|++|..++ ...+
T Consensus 172 ~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~g~-~~~~ 246 (579)
T PLN03102 172 TPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAII----GWEMGTCPVYLWTLPMFHCNGW-TFTW 246 (579)
T ss_pred CCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHh----hcCCCCCCeEEecCChhhhcch-hHHH
Confidence 1111 11245689999999999999999999999987544333222 1235567788999999999887 4556
Q ss_pred HHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCC
Q 009077 248 CALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPH 327 (544)
Q Consensus 248 ~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~ 327 (544)
.++..|+++++...+++..+++.++++++|++.++|+++..|.+.........++++.+++||+++++.+.+.+++ + +
T Consensus 247 ~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g 324 (579)
T PLN03102 247 GTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-G 324 (579)
T ss_pred HHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-C
Confidence 6788899988888888999999999999999999999999999875443334567788999999999999999875 5 8
Q ss_pred CceeccccccccCccccccccccC---CC------CccCCCeeeeccCCceEEEEcCCCCCCCCC--CCceeEEEecCcc
Q 009077 328 AKLGQGYGMTEAGPVLSMCLAFAK---EP------FEIKSGACGTVVRNAEMKIVDPDTGISLPR--NQAGEICIRGAQI 396 (544)
Q Consensus 328 ~~v~~~yG~tE~~~~~~~~~~~~~---~~------~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~ 396 (544)
+++++.||+||+++.++.+..... .+ .....+..+.+++ .+++++.+.+.+++. ++.|||+++|+.+
T Consensus 325 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~ 402 (579)
T PLN03102 325 FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSI 402 (579)
T ss_pred CeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcch
Confidence 899999999999865443211100 00 0011222333333 455666556666654 3679999999999
Q ss_pred cccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCC
Q 009077 397 MKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAA 476 (544)
Q Consensus 397 ~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~ 476 (544)
++||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||++|.++|.|.+++|++++++..
T Consensus 403 ~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~ 481 (579)
T PLN03102 403 MKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHPTW 481 (579)
T ss_pred hhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCccc
Confidence 999999999888887 6899999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceEEEEEEecCCCCC----------CHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 477 GEVPVAFVVRSNGSKI----------TEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 477 ~~~~~~~v~~~~~~~~----------~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
++.++++|++.++... ...+++++++.+|+.|++|..+++++++|+|++||++|++|++++.+
T Consensus 482 ~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 482 GETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred cceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 8999999998765432 35689999999999999999999999999999999999999998654
No 48
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-66 Score=535.92 Aligned_cols=493 Identities=22% Similarity=0.358 Sum_probs=418.0
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHhh
Q 009077 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (544)
|+..++.+.|.+.+. ++++++++. ++.+||+||.++++++|++|.++ |++++++|+++++|+++++++++||+++
T Consensus 2 ~~~~~~~~~l~~~a~--~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~ 77 (529)
T PRK07867 2 SSAPTVAELLLPLAE--DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALS 77 (529)
T ss_pred CccccHHHHHHHhcc--cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 455689999988775 789999886 78999999999999999999997 8999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCC
Q 009077 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKIN 180 (544)
Q Consensus 101 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (544)
|++++|+++.++.+++..+++.++++++++++.....+.++. ....++.++. ..+.+.+..............
T Consensus 78 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~ 150 (529)
T PRK07867 78 GIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD--PGVRVINVDS-----PAWADELAAHRDAEPPFRVAD 150 (529)
T ss_pred CCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc--cCceEEEecc-----ccHHHHhcccCCCCCCcccCC
Confidence 999999999999999999999999999999988776554432 1233333321 124444332222222233456
Q ss_pred CCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc
Q 009077 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (544)
Q Consensus 181 ~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 260 (544)
++++++++|||||||.||+|.++|+++......... .+++.++|+++..+|++|..+++..++.++..|+++++.+
T Consensus 151 ~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 226 (529)
T PRK07867 151 PDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQ----RFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRR 226 (529)
T ss_pred ccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHH----hhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecC
Confidence 799999999999999999999999999877766554 3457889999999999999999887888999999999988
Q ss_pred CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccC
Q 009077 261 KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (544)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~ 340 (544)
.+++..+++.++++++|++.++|+.+..++...+......+++| +++||+.+++.. ..+.+.+ ++++++.||+||++
T Consensus 227 ~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr-~~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~ 303 (529)
T PRK07867 227 KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLR-IVYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGG 303 (529)
T ss_pred CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceE-EEecCCCChHHH-HHHHHHh-CCcEEEeecccccc
Confidence 89999999999999999999999999988876543333345666 456888887764 6677778 89999999999998
Q ss_pred ccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCC------------ceeEEE-ecCcccccccCChhhh
Q 009077 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQ------------AGEICI-RGAQIMKGYLNDREAT 407 (544)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~------------~Gel~v-~~~~~~~gy~~~~~~~ 407 (544)
.++..+ .....+++|.|+++ ++++|++++.+++.|+ .|||++ +|++++.||+++++.+
T Consensus 304 ~~~~~~-------~~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~ 374 (529)
T PRK07867 304 VAITRT-------PDTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEAD 374 (529)
T ss_pred cccccC-------CCCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhh
Confidence 554321 11234678999998 6778866788888888 899999 9999999999999888
Q ss_pred hhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEec
Q 009077 408 ETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRS 487 (544)
Q Consensus 408 ~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 487 (544)
...+ .+|||+|||+++++++|++++.||.+|+|+.+|++++|.+||++|.++|+|.+++|++++++..++.++++++..
T Consensus 375 ~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~ 453 (529)
T PRK07867 375 AERM-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLA 453 (529)
T ss_pred hhhh-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEEC
Confidence 8777 689999999999999999999999999999999999999999999999999999999999998899999999998
Q ss_pred CCCCCCHHHHHHHHHhc--ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhccc
Q 009077 488 NGSKITEDEIKQYISKQ--VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDL 542 (544)
Q Consensus 488 ~~~~~~~~~l~~~l~~~--l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 542 (544)
++...+.++++++++.+ |+.+++|..+.++++||+|++||++|+.|+++......
T Consensus 454 ~~~~~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~~~ 510 (529)
T PRK07867 454 PGAKFDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDCAD 510 (529)
T ss_pred CCCCCCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCCCC
Confidence 88778899999999875 99999999999999999999999999999998876543
No 49
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.1e-66 Score=540.18 Aligned_cols=499 Identities=26% Similarity=0.427 Sum_probs=422.4
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCC----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHh
Q 009077 24 HLPLHTYCFENISQFADRPCIINGP----TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (544)
..|+.+.+.+.++.+|+++|+++.. ..+.+||+||+++++++|++|.+.|+++|++|+++++|+++++++++||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4689999999999999999998521 246899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh-----HHHHHHHhhc-C-cEEEEeCCCCCCCccHHHHHhhccCC
Q 009077 100 IGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEHH-G-ARIVTIDPPPENCLHFSELITQADEN 172 (544)
Q Consensus 100 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (544)
+|++++|++|.++.+++.++++.++++++++++... .......... . ..++..+.. ....++.++......
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 178 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGD--GDDSFDRVLMTPERD 178 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCC--CCcCHHHHhhccccc
Confidence 999999999999999999999999999999987642 2222222111 1 233333321 222344443211110
Q ss_pred C-------CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHH
Q 009077 173 E-------IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (544)
Q Consensus 173 ~-------~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 245 (544)
. .......++++++++|||||||.||+|.++|.++...+..... .+++..++++++.+|++|..|++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~ 254 (538)
T TIGR03208 179 DTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE----RLELGGGDVILMASPMAHQTGFMYG 254 (538)
T ss_pred cccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh----hcCCCCCCeEEEeCCchhHHHHHHH
Confidence 0 1112356799999999999999999999999999887776655 3457889999999999999998888
Q ss_pred HHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHC
Q 009077 246 LLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKL 325 (544)
Q Consensus 246 ~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~ 325 (544)
++.++..|+++++.+.+++..+++.+++++++++.++|+++..+.+........++++|.++++|+++++++.+++.+.+
T Consensus 255 ~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~ 334 (538)
T TIGR03208 255 LMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL 334 (538)
T ss_pred HHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc
Confidence 89999999999998889999999999999999999999999998876654455678999999999999999999999988
Q ss_pred CCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChh
Q 009077 326 PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDRE 405 (544)
Q Consensus 326 ~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 405 (544)
++.+++.||+||++.+...+.. ........+.|+|+++++++++| +++.+++.|+.|||+++|+.++.||+++++
T Consensus 335 -~~~~~~~YG~tE~~~~~~~~~~---~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~ 409 (538)
T TIGR03208 335 -GALIVSAWGMTENGAVTVTEPD---DALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPH 409 (538)
T ss_pred -CCeEEeeeccCcCCCccccCcc---cchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCcc
Confidence 7999999999999876554321 11122245789999999999999 467889999999999999999999999887
Q ss_pred hhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEE
Q 009077 406 ATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVV 485 (544)
Q Consensus 406 ~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 485 (544)
.+. .+.++||+|||+|+++++|++++.||.+|+|+.+|++|+|.+||++|.++++|.+++|++.++...++.++++++
T Consensus 410 ~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~ 487 (538)
T TIGR03208 410 LNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVV 487 (538)
T ss_pred ccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEE
Confidence 654 347899999999999999999999999999999999999999999999999999999999988888899999999
Q ss_pred ecCCCCCCHHHHHHHHHh-cccCCCcccEEEEecCCCCCCCcccchHHHHh
Q 009077 486 RSNGSKITEDEIKQYISK-QVVFYKRINRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 486 ~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
+.++...+.+++.++++. .++.+++|..+++++++|+|++||++|.+|++
T Consensus 488 ~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~~ 538 (538)
T TIGR03208 488 PKPGCTLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLRE 538 (538)
T ss_pred ECCCCCCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhcC
Confidence 887777888999999985 79999999999999999999999999999863
No 50
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.3e-66 Score=539.17 Aligned_cols=508 Identities=27% Similarity=0.434 Sum_probs=430.6
Q ss_pred CCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhh
Q 009077 21 IPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (544)
Q Consensus 21 ~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (544)
.....|+.++++++++.+|+++|+++. .++.+||+||+++++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 19 ~~~~~~l~~~~~~~~~~~pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~ 97 (547)
T PRK06087 19 YWGDASLADYWQQTARAMPDKIAVVDN-HGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKV 97 (547)
T ss_pred CCCCCCHHHHHHHHHHHCCCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 334468999999999999999999875 2479999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCceEEEEecch-----hHHHHHHHhhc-C-cEEEEeCCCC--CCCccHHHHHhhccC
Q 009077 101 GATSTTANPFYTPPEIAKQAIASKAKIIITQAVY-----NDKVRDLSEHH-G-ARIVTIDPPP--ENCLHFSELITQADE 171 (544)
Q Consensus 101 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~-~-~~~v~~~~~~--~~~~~~~~~~~~~~~ 171 (544)
|++++|++|.++.+++.++++.+++++++++... .+.+....... . ..++.++... .....+.+++.....
T Consensus 98 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (547)
T PRK06087 98 GAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYEP 177 (547)
T ss_pred CcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCCc
Confidence 9999999999999999999999999999997532 23333333322 1 1344443321 122345554332211
Q ss_pred CCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHH
Q 009077 172 NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALR 251 (544)
Q Consensus 172 ~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 251 (544)
........++++++++|||||||.||+|.++|.++......... .+++.+++++++..|++|.+|++..++.++.
T Consensus 178 -~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~ 252 (547)
T PRK06087 178 -LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCA----RLNLTWQDVFMMPAPLGHATGFLHGVTAPFL 252 (547)
T ss_pred -ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCCCCCCeEEEecchHHHHHHHHHHHHHHh
Confidence 11223456789999999999999999999999999877666544 3457899999999999999998888999999
Q ss_pred hCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCcee
Q 009077 252 VGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (544)
Q Consensus 252 ~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~ 331 (544)
.|+++++.+.+++..+++.+++++++++.++|+++..+++........++++|.+++||+++++++.+.+.+. +++++
T Consensus 253 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~ 330 (547)
T PRK06087 253 IGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLL 330 (547)
T ss_pred cCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEE
Confidence 9999999999999999999999999999999888888887766555677899999999999999999988764 89999
Q ss_pred ccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhc
Q 009077 332 QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTI 411 (544)
Q Consensus 332 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 411 (544)
+.||+||++.+..... .........+.|.|++++.++++| +++.+++.|+.|||+++|+.++.||+++++.+...+
T Consensus 331 ~~YG~TE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 406 (547)
T PRK06087 331 SVYGSTESSPHAVVNL---DDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARAL 406 (547)
T ss_pred EEecccccCCccccCC---CcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHh
Confidence 9999999987654321 111122345689999999999999 577899999999999999999999999999988888
Q ss_pred CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecC-CC
Q 009077 412 DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSN-GS 490 (544)
Q Consensus 412 ~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~-~~ 490 (544)
..++||+|||+++++++|++++.||.+|+|+.+|.+++|.+||++|.++++|.+++|++..++..++.+++++++.+ +.
T Consensus 407 ~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 486 (547)
T PRK06087 407 DEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH 486 (547)
T ss_pred CCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCC
Confidence 78899999999999999999999999999999999999999999999999999999999998888899999998865 44
Q ss_pred CCCHHHHHHHHH-hcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 491 KITEDEIKQYIS-KQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 491 ~~~~~~l~~~l~-~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
..+.+++.+++. +.++.+++|..+.++++||+|++||++|++|++++.+.
T Consensus 487 ~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~ 537 (547)
T PRK06087 487 SLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRR 537 (547)
T ss_pred CCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHH
Confidence 567788888885 57999999999999999999999999999999988765
No 51
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-66 Score=550.38 Aligned_cols=506 Identities=23% Similarity=0.245 Sum_probs=402.1
Q ss_pred CCCHHH-HHHhhhccCCCccEEEeCCCC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 24 HLPLHT-YCFENISQFADRPCIINGPTG------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 24 ~~~~~~-~l~~~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
.+|+.+ .|.+.+.++|+++|+++.+++ +.+||+||.++++++|+.|+++|+++||+|+++++|++++++++||
T Consensus 173 ~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA 252 (728)
T PLN03052 173 VLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLA 252 (728)
T ss_pred EeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 366665 444555678999999986432 4899999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhcCcEEEEeCCCC--------CCCccH
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN------DKVRDLSEHHGARIVTIDPPP--------ENCLHF 162 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~v~~~~~~--------~~~~~~ 162 (544)
|+++|++++|++|.++.+++.+++++++++++|+++... +....+......+++++.... .....|
T Consensus 253 ~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~ 332 (728)
T PLN03052 253 IILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDMSW 332 (728)
T ss_pred HHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccccCCccH
Confidence 999999999999999999999999999999999987532 112222211222333332211 123456
Q ss_pred HHHHhhccC----CCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhh
Q 009077 163 SELITQADE----NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFH 238 (544)
Q Consensus 163 ~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 238 (544)
++++..... ...+.....++++++|+|||||||.||+|+++|.+++........ .+++.++|+++...|++|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~----~~~l~~~d~~~~~~~l~w 408 (728)
T PLN03052 333 DDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWA----HLDIRKGDIVCWPTNLGW 408 (728)
T ss_pred HHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHH----hcCCCCCcEEEECCCcHH
Confidence 666433211 111222345689999999999999999999999988665544433 245789999999999999
Q ss_pred HHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHH
Q 009077 239 IYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKEL 317 (544)
Q Consensus 239 ~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~ 317 (544)
+.+. ..++.+|..|+++++.++ .++..+++.++++++|++.++|++++.|.+.......+++++|.++++|++++++.
T Consensus 409 ~~g~-~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~ 487 (728)
T PLN03052 409 MMGP-WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDD 487 (728)
T ss_pred HhHH-HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHH
Confidence 9987 567899999999999875 45677999999999999999999999998875445567899999999999999999
Q ss_pred HHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCC--ceeEEEecCc
Q 009077 318 EDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQ--AGEICIRGAQ 395 (544)
Q Consensus 318 ~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~~ 395 (544)
..++.+.++...+++.||+||++........ ......+++|.|.++++++++| +++++++.|+ .|||++.++.
T Consensus 488 ~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~----~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~ 562 (728)
T PLN03052 488 YLWLMSRAGYKPIIEYCGGTELGGGFVTGSL----LQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLM 562 (728)
T ss_pred HHHHHHhcCCCCeEeeccChhhCcccccCCC----CCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCC
Confidence 8888887744689999999999754332211 1123457889999999999999 5788998885 6999998652
Q ss_pred --ccccccCChhhhhhhc------CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHH-cCCCccee
Q 009077 396 --IMKGYLNDREATETTI------DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLI-AHPNISDA 466 (544)
Q Consensus 396 --~~~gy~~~~~~~~~~~------~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~-~~~~v~~~ 466 (544)
...+|+++.. ...-| ....||+|||+++++++|++++.||+||+|+++|.+|++.+||++|. .+|.|.++
T Consensus 563 ~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~ea 641 (728)
T PLN03052 563 FGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLET 641 (728)
T ss_pred CCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceE
Confidence 3345666532 12122 12348999999999999999999999999999999999999999995 78999999
Q ss_pred EEEeeeCCCCC-ceEEEEEEec--CCCCCCHHHHHHH----HHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 467 AVVPMKDEAAG-EVPVAFVVRS--NGSKITEDEIKQY----ISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 467 ~v~~~~~~~~~-~~~~~~v~~~--~~~~~~~~~l~~~----l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
+|++++++..+ +.++++|++. ++...+.++|+++ ++++++++..|+.|+++++||+|++||++|+.|++.+.+
T Consensus 642 aVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~ 721 (728)
T PLN03052 642 AAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQ 721 (728)
T ss_pred EEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHh
Confidence 99999988665 8899999987 5555665666655 567788899999999999999999999999999998865
Q ss_pred c
Q 009077 540 G 540 (544)
Q Consensus 540 ~ 540 (544)
.
T Consensus 722 ~ 722 (728)
T PLN03052 722 E 722 (728)
T ss_pred h
Confidence 4
No 52
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-66 Score=536.22 Aligned_cols=506 Identities=27% Similarity=0.430 Sum_probs=430.5
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.|+.++|.++++++|+++|+++. ++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 89 (524)
T PRK06188 12 ATYGHLLVSALKRYPDRPALVLG--DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRR 89 (524)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEE
Confidence 58999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecc-hhHHHHHHHhhc-Cc-EEEEeCCCCCCCccHHHHHhhccCCCCCccCCCC
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAV-YNDKVRDLSEHH-GA-RIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (544)
+|++|.++.+.+.++++.++++.+++++. ....+....... .. .++.+... .....+.+....... ........+
T Consensus 90 v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~ 167 (524)
T PRK06188 90 TALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPV-PDGVDLLAAAAKFGP-APLVAAALP 167 (524)
T ss_pred EecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCc-cchhhHHHhhhccCc-ccccccCCC
Confidence 99999999999999999999999999876 333333322221 11 23333321 111111111111111 111112345
Q ss_pred CCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC
Q 009077 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK 261 (544)
Q Consensus 182 ~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~ 261 (544)
++++++++||||||.||+|.++|.++......... .+++..++++++.+|++|.+++ .++.++..|+++++.+.
T Consensus 168 ~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~g~--~~~~~l~~G~~~~~~~~ 241 (524)
T PRK06188 168 PDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLA----EWEWPADPRFLMCTPLSHAGGA--FFLPTLLRGGTVIVLAK 241 (524)
T ss_pred CCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh----hcCCCcCcEEEEecCchhhhhH--HHHHHHHcCCEEEEcCC
Confidence 67999999999999999999999999887776655 4457889999999999998886 35788999999999999
Q ss_pred cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCc
Q 009077 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGP 341 (544)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~ 341 (544)
.++..+++.++++++|++.++|+++..+++........++++|.+++||++++++....+.+.+ +..+++.||+||++.
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~ 320 (524)
T PRK06188 242 FDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPM 320 (524)
T ss_pred CCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCC
Confidence 9999999999999999999999999999988776666788999999999999999999998888 788999999999976
Q ss_pred cccccccccC-CCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecC
Q 009077 342 VLSMCLAFAK-EPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTG 420 (544)
Q Consensus 342 ~~~~~~~~~~-~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~Tg 420 (544)
.++.+..... ........++|+|++++.++++|+ ++++++.|+.|||+++|+.+..||++++..+...+ .+|||+||
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 398 (524)
T PRK06188 321 VITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDE-DGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTG 398 (524)
T ss_pred ceeecCchhccccccccCCccccccCCcEEEEEcC-CCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeec
Confidence 5554322111 112234567899999999999995 58899999999999999999999999998888777 68999999
Q ss_pred ceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHH
Q 009077 421 DIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQY 500 (544)
Q Consensus 421 Dl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 500 (544)
|+++++++|++++.||.+++|+.+|++++|.+||++|.++++|.+++|++..++..++.+++++++.++...+.++++++
T Consensus 399 Dl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 478 (524)
T PRK06188 399 DVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAH 478 (524)
T ss_pred ceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988888899999999887777788899999
Q ss_pred HHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcccC
Q 009077 501 ISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 501 l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
+++.++.+++|..++++++||+|++||++|++|+++|.++-+|
T Consensus 479 ~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~~~ 521 (524)
T PRK06188 479 VKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGRGR 521 (524)
T ss_pred HHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999888765
No 53
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.8e-66 Score=538.14 Aligned_cols=519 Identities=30% Similarity=0.511 Sum_probs=428.0
Q ss_pred ceEEecCCCCCCCC-----CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 009077 9 EFIFRSKLPDIYIP-----NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLL 83 (544)
Q Consensus 9 ~~~~~~~~~~~~~~-----~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~ 83 (544)
+++|.+..++.+.+ .+.++.+.|.+.++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~ 79 (557)
T PRK07059 2 EKIWLKSYPPGVPAEIDASQYPSLADLLEESFRQYADRPAFICM--GKAITYGELDELSRALAAWLQSRGLAKGARVAIM 79 (557)
T ss_pred CCCccccCCCCCCCccCCCCCCCHHHHHHHHHHHcCCCceEEEc--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 56677766552222 2368999999999999999999986 7899999999999999999999999999999999
Q ss_pred cCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCC---------
Q 009077 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDP--------- 154 (544)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~--------- 154 (544)
++|+++++++++||+++|++++|++|.++...+.++++.++++++++++.....+...........+.+..
T Consensus 80 ~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (557)
T PRK07059 80 MPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKG 159 (557)
T ss_pred CCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccc
Confidence 99999999999999999999999999999999999999999999999887766555443322222111110
Q ss_pred -----------------CCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhc
Q 009077 155 -----------------PPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDG 217 (544)
Q Consensus 155 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~ 217 (544)
.......+.+.+..............++++++++|||||||.||+|.++|.++...+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 239 (557)
T PRK07059 160 HIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAW 239 (557)
T ss_pred cccccccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhh
Confidence 001122344443332222233345678999999999999999999999999997665433222
Q ss_pred CCCCccC---CCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcC
Q 009077 218 ENPNLYL---HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG 293 (544)
Q Consensus 218 ~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 293 (544)
....+.. .....+++.+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+.++|.++..+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~ 319 (557)
T PRK07059 240 LQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNP 319 (557)
T ss_pred hcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCc
Confidence 1111111 124567888999999887666777777787766554 458899999999999999999999999998877
Q ss_pred CCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEE
Q 009077 294 DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIV 373 (544)
Q Consensus 294 ~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 373 (544)
......+++++.++.||+++++.+.+.+.+.+ ++++++.||+||++.+++.+. ........++|.|+++++++++
T Consensus 320 ~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~vG~p~~g~~v~i~ 394 (557)
T PRK07059 320 DFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNP----VDATEFSGTIGLPLPSTEVSIR 394 (557)
T ss_pred CcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCC----CCCCCcCCcccCccCCcEEEEE
Confidence 65566678999999999999999999999988 899999999999997655432 1112335789999999999999
Q ss_pred cCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHH
Q 009077 374 DPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAEL 453 (544)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 453 (544)
| +++.+++.|+.|||+++|+.++.||+++++.+...+..+|||+|||+++++++|++++.||++|+|+.+|++++|.+|
T Consensus 395 d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~i 473 (557)
T PRK07059 395 D-DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEI 473 (557)
T ss_pred C-CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHH
Confidence 9 468899999999999999999999999999888888789999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHH
Q 009077 454 EAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDL 533 (544)
Q Consensus 454 e~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 533 (544)
|++|.++++|.+++|+++++...++.++++++... ...+.+++++++.+.++.+++|..+.+++++|+|++||++|+.|
T Consensus 474 E~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~-~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L 552 (557)
T PRK07059 474 EEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKD-PALTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRREL 552 (557)
T ss_pred HHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCC-CCCCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHH
Confidence 99999999999999999988888888888888653 34677899999999999999999999999999999999999999
Q ss_pred HhH
Q 009077 534 RTK 536 (544)
Q Consensus 534 ~~~ 536 (544)
+++
T Consensus 553 ~~~ 555 (557)
T PRK07059 553 RDG 555 (557)
T ss_pred Hhh
Confidence 865
No 54
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=8.5e-66 Score=533.75 Aligned_cols=499 Identities=28% Similarity=0.429 Sum_probs=424.0
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCC---CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhC
Q 009077 25 LPLHTYCFENISQFADRPCIINGPT---GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (544)
.|+.++++++++++|+++|+.+.+. .+.+||+||.++++++|+.|.++|+++|++|+++++|+++++++++||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 5899999999999999999987542 2789999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc--Cc-EEEEeCCCC---CCCccHHHHHhhccCCCCC
Q 009077 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GA-RIVTIDPPP---ENCLHFSELITQADENEIP 175 (544)
Q Consensus 102 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~-~~v~~~~~~---~~~~~~~~~~~~~~~~~~~ 175 (544)
+++++++|.++.+.+.++++.++++++++++...+.+.++.... .. .++..+... .....++++..........
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPATLCY 166 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCccccc
Confidence 99999999999999999999999999999998877766654432 12 233332211 2234455443222211112
Q ss_pred ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 176 ~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
.....++++++++|||||||.||+|.++|.++......... ...+.+++++++.+|++|..+....++.++..|++
T Consensus 167 ~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 242 (517)
T PRK08008 167 APPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAW----QCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGAT 242 (517)
T ss_pred cCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhh----hcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcE
Confidence 23456789999999999999999999999999755432221 12367899999999999998887888999999999
Q ss_pred EEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
+++.+.+++..+++.++++++|++.++|.+++.+.............++.+.++ .+++++.+..+.+.+ ++++++.||
T Consensus 243 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~YG 320 (517)
T PRK08008 243 FVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLTSYG 320 (517)
T ss_pred EEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEeecc
Confidence 999999999999999999999999999999999887654444445677777665 488999999999988 899999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEec---CcccccccCChhhhhhhcC
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRG---AQIMKGYLNDREATETTID 412 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~---~~~~~gy~~~~~~~~~~~~ 412 (544)
+||++..+.... ........++|.|+++++++++| +++.+++.|+.|||+++| +++..||+++++.+.+.+.
T Consensus 321 ~tE~~~~~~~~~----~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~ 395 (517)
T PRK08008 321 MTETIVGIIGDR----PGDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLE 395 (517)
T ss_pred ccccccccccCC----ccccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhccc
Confidence 999985444321 11223446799999999999999 578999999999999998 5899999999999998888
Q ss_pred CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCC
Q 009077 413 KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKI 492 (544)
Q Consensus 413 ~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 492 (544)
.+|||+|||+++++++|.+++.||.+|+|+.+|++++|.+||+++.+++.|.+++|++++++..++.+.+++++.++...
T Consensus 396 ~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~ 475 (517)
T PRK08008 396 ADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETL 475 (517)
T ss_pred CCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999988888899999999887778
Q ss_pred CHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHH
Q 009077 493 TEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLR 534 (544)
Q Consensus 493 ~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 534 (544)
+.+++.++++++++++++|..+++++++|+|++||++|+.|+
T Consensus 476 ~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 476 SEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 888999999999999999999999999999999999999874
No 55
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-66 Score=549.73 Aligned_cols=506 Identities=25% Similarity=0.350 Sum_probs=407.3
Q ss_pred CCCCCCCHHHHHHhhhccCCCccEEEeCC-------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHH
Q 009077 20 YIPNHLPLHTYCFENISQFADRPCIINGP-------TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF 92 (544)
Q Consensus 20 ~~~~~~~~~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~ 92 (544)
..+...|+.+.|.+.++.+|+++|+++.+ ..+.+||+||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 16 ~~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~ 94 (631)
T PRK07769 16 RFPPNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLI 94 (631)
T ss_pred cccccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHH
Confidence 34455799999999999999999998632 126899999999999999999987 8999999999999999999
Q ss_pred HHHHHHhhCCeEeec-CCCCC--HHHHHHHHHhcCceEEEEecchhHHHHHHHhhc----CcEEEEeCCCCCCCccHHHH
Q 009077 93 AFLGASYIGATSTTA-NPFYT--PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH----GARIVTIDPPPENCLHFSEL 165 (544)
Q Consensus 93 ~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~ 165 (544)
++|||+++|++++|+ ++..+ .+++.++++.++++++|++....+.+....... ...++.++.... .
T Consensus 95 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 167 (631)
T PRK07769 95 AFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPD-------E 167 (631)
T ss_pred HHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcccccc-------c
Confidence 999999999999999 55554 578999999999999999987666554433221 123333322110 0
Q ss_pred HhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHH
Q 009077 166 ITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (544)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 245 (544)
...........++++++++|||||||.||+|.++|.++......... .+++.+++++++.+|++|.+|+..
T Consensus 168 ----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~Pl~h~~gl~~- 238 (631)
T PRK07769 168 ----VGATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVID----ALEGQEGDRGVSWLPFFHDMGLIT- 238 (631)
T ss_pred ----cccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHH----HcCCCCcceEEEeCCCcCchhhHH-
Confidence 00011112356789999999999999999999999999877766554 345788999999999999999854
Q ss_pred HHHHHHhCcEEEEccC--c--CHHHHHHHHHhccc---eeccCcHHHHHHHHhcC---CC--CCCCCCCceEEEEecccC
Q 009077 246 LLCALRVGAAILIMQK--F--DIVKLMELVQKYKV---TVAPFVPPIVLAVAKSG---DV--DKYDMSSIRTVMSGAAPM 313 (544)
Q Consensus 246 ~~~~l~~g~~~v~~~~--~--~~~~~~~~i~~~~~---t~l~~~P~~l~~l~~~~---~~--~~~~l~~l~~~~~~G~~l 313 (544)
.+.++..|+++++..+ + ++..+++.+.++++ +++..+|+++..+.... .. ....++++|.+++||+++
T Consensus 239 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l 318 (631)
T PRK07769 239 VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPV 318 (631)
T ss_pred HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCC
Confidence 4556667888877642 3 88899999998876 78889999887766431 11 134678999999999999
Q ss_pred CHHHHHHHHHHCC-----CCceeccccccccCccccccccccCC----------------------CCccCCCeeeeccC
Q 009077 314 GKELEDAVRAKLP-----HAKLGQGYGMTEAGPVLSMCLAFAKE----------------------PFEIKSGACGTVVR 366 (544)
Q Consensus 314 ~~~~~~~~~~~~~-----~~~v~~~yG~tE~~~~~~~~~~~~~~----------------------~~~~~~~~~g~p~~ 366 (544)
++++.+.+.+.|+ ...+++.||+||++.+++........ +......++|+|.+
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~ 398 (631)
T PRK07769 319 SPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGV 398 (631)
T ss_pred CHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCC
Confidence 9999999999872 34699999999987654432110000 00012247899999
Q ss_pred CceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC-----------------CCCceecCceEEEcCCC
Q 009077 367 NAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID-----------------KEGWLHTGDIGYIDDDD 429 (544)
Q Consensus 367 ~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------------~~~~~~TgDl~~~~~~g 429 (544)
+..++++|++++.+++.|+.|||+++|++++.||+++++.+...|. .+|||+|||+|++ ++|
T Consensus 399 ~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~-~dG 477 (631)
T PRK07769 399 SEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVY-FDG 477 (631)
T ss_pred CcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccE-ECC
Confidence 9999999987889999999999999999999999999988877763 2589999999999 499
Q ss_pred cEEEEccccceEEeCceeeCcHHHHHHHHc-CCCcce--eEEEeeeC-------------------CCCCceEEEEEEec
Q 009077 430 ELFIVDRLKELIKFKGFQVAPAELEAMLIA-HPNISD--AAVVPMKD-------------------EAAGEVPVAFVVRS 487 (544)
Q Consensus 430 ~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~-~~~v~~--~~v~~~~~-------------------~~~~~~~~~~v~~~ 487 (544)
++++.||.+|+||++|++|+|.+||+.|.+ +|.|.+ ++|+++++ +..++.+++++++.
T Consensus 478 ~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~ 557 (631)
T PRK07769 478 ELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERA 557 (631)
T ss_pred EEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEec
Confidence 999999999999999999999999999986 899998 88888887 55788899999988
Q ss_pred CC-CCCCHHHHHHHHHhcccC-CC-cccEEEEec--CCCCCCCcccchHHHHhHHhhcccC
Q 009077 488 NG-SKITEDEIKQYISKQVVF-YK-RINRVFFTD--SIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 488 ~~-~~~~~~~l~~~l~~~l~~-~~-~p~~~~~~~--~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
++ ...+.++|.+++++++.. ++ .|..+.+++ +||+|++||++|++|++.|.++.+|
T Consensus 558 ~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~~~ 618 (631)
T PRK07769 558 PGAHKLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGSLR 618 (631)
T ss_pred CccccccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCCCc
Confidence 76 356788999999999985 56 477888886 6999999999999999999998876
No 56
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.2e-66 Score=538.68 Aligned_cols=503 Identities=33% Similarity=0.551 Sum_probs=421.2
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.++.+.+.+.++++|+++|+++. ++.+||+||++++.++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFL--GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIV 101 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEec--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEE
Confidence 58999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCC---------------------------
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPE--------------------------- 157 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------------------------- 157 (544)
+|++|.++..++.++++.++++++++++.....+...........+.+.....
T Consensus 102 vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (563)
T PRK06710 102 VQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSES 181 (563)
T ss_pred eccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhccccccccccccc
Confidence 99999999999999999999999999887655443332211111111110000
Q ss_pred -CCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccC-CCCeEEEEecc
Q 009077 158 -NCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL-HKEDVILCVLP 235 (544)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~p 235 (544)
....|+.+ ..............++++++++|||||||.||+|.++|+++........... +.. ...+++++..|
T Consensus 182 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~l~~~p 257 (563)
T PRK06710 182 ETIHLWNSV-EKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL---YNCKEGEEVVLGVLP 257 (563)
T ss_pred chhhhhhhh-hhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc---cCCCCCCceEEEeCc
Confidence 00011111 0000011111112357899999999999999999999999975543332211 122 34568899999
Q ss_pred hhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCH
Q 009077 236 LFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGK 315 (544)
Q Consensus 236 ~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~ 315 (544)
++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++........++++|.+++||+++++
T Consensus 258 ~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~ 337 (563)
T PRK06710 258 FFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPV 337 (563)
T ss_pred hHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCH
Confidence 99999987777789999999999888899999999999999999999999999988765555567899999999999999
Q ss_pred HHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCc
Q 009077 316 ELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQ 395 (544)
Q Consensus 316 ~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 395 (544)
++.+++++.+ ++.+++.||+||++.++..... ......++.|+|.+++.++++|++++.+++.|+.|||+++|+.
T Consensus 338 ~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~ 412 (563)
T PRK06710 338 EVQEKFETVT-GGKLVEGYGLTESSPVTHSNFL----WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQ 412 (563)
T ss_pred HHHHHHHHhh-CCCEecccccccCccccccCcc----cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCc
Confidence 9999999988 8999999999999875443211 1122346789999999999999878899999999999999999
Q ss_pred ccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCC
Q 009077 396 IMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEA 475 (544)
Q Consensus 396 ~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~ 475 (544)
++.||+++++.+...+ .++||+|||+++++++|.+++.||.||+|+.+|.+|+|.+||+.|.+++.|.+++|++++++.
T Consensus 413 ~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~ 491 (563)
T PRK06710 413 IMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPY 491 (563)
T ss_pred cchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCC
Confidence 9999999998887777 689999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 476 AGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 476 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.++.++++++..++...+.+++.+++++.++.+++|..+.++++||+|++||++|++|++++..
T Consensus 492 ~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 492 RGETVKAFVVLKEGTECSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred cCceeEEEEEECCCCCCCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhh
Confidence 8899999999888777888999999999999999999999999999999999999999988754
No 57
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-65 Score=536.32 Aligned_cols=503 Identities=30% Similarity=0.503 Sum_probs=417.8
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKL-GVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.++.+.|.++++++|+++|+.+. ++.+||.||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v 101 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLI 101 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 68999999999999999999876 68999999999999999999985 9999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEe---------------CC------------CC
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTI---------------DP------------PP 156 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~---------------~~------------~~ 156 (544)
++|++|.++.+++.++++.++++++++++.....+...........+.. .. ..
T Consensus 102 ~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK12492 102 VVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHL 181 (562)
T ss_pred EeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCC
Confidence 9999999999999999999999999998765544433322111111100 00 00
Q ss_pred CCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCC-----ccCCC-CeEE
Q 009077 157 ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPN-----LYLHK-EDVI 230 (544)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~-----~~~~~-~~~~ 230 (544)
.....|++.+.........+.....+++++++|||||||.||+|.++|+++..........+... ..+.. .+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (562)
T PRK12492 182 PQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVM 261 (562)
T ss_pred cccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEE
Confidence 11233444432222111223345678999999999999999999999999977665443322100 01223 3577
Q ss_pred EEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEe
Q 009077 231 LCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSG 309 (544)
Q Consensus 231 ~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~ 309 (544)
++.+|++|.+++...++..+..|...++.. ..++..+++.++++++|++.++|+++..+.+........++++|.+++|
T Consensus 262 ~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~g 341 (562)
T PRK12492 262 IAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSG 341 (562)
T ss_pred EEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEec
Confidence 889999999998777777888888776654 4688999999999999999999999999998876556667899999999
Q ss_pred cccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeE
Q 009077 310 AAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEI 389 (544)
Q Consensus 310 G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel 389 (544)
|+++++++.+.+++.+ ++++++.||+||++.++..+. .......++.|.|+++++++++|+ ++.+++.|+.|||
T Consensus 342 G~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~p~~~~~v~ivd~-~~~~~~~g~~Gel 415 (562)
T PRK12492 342 GTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNP----YGELARLGTVGIPVPGTALKVIDD-DGNELPLGERGEL 415 (562)
T ss_pred cccCCHHHHHHHHHHh-CCceeeccCccccCceeeecC----CcccccCCccceecCCCEEEEECC-CCCCCCCCCceEE
Confidence 9999999999999988 899999999999987665432 111234468899999999999995 7888999999999
Q ss_pred EEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEE
Q 009077 390 CIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVV 469 (544)
Q Consensus 390 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~ 469 (544)
+++|+.++.||+++++.+...+..++||+|||+|+++++|++++.||.+|+|+.+|+++++.+||..|.+++.|.+++|+
T Consensus 416 ~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~ 495 (562)
T PRK12492 416 CIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCAAI 495 (562)
T ss_pred EEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 99999999999999998888887789999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 470 PMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 470 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
+.++...++.+++++++.++ ..+.++++++++++++.+++|..+.++++||+|++||++|++|+++
T Consensus 496 ~~~~~~~~~~~~~~v~~~~~-~~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 496 GVPDERSGEAVKLFVVARDP-GLSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred eccCCCCCceEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 99888888888888876543 4577899999999999999999999999999999999999999875
No 58
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-65 Score=537.17 Aligned_cols=526 Identities=29% Similarity=0.465 Sum_probs=434.0
Q ss_pred cccceEEecCCCCC-CCC-CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 009077 6 DHQEFIFRSKLPDI-YIP-NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLL 83 (544)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~ 83 (544)
+.+..+|....|.. .++ ...++.+.|.++++.+|+++|+.+. ++.+||.||++++.++|+.|.++|+++|++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~ 89 (567)
T PRK06178 12 ALQQAAWPAGIPREPEYPHGERPLTEYLRAWARERPQRPAIIFY--GHVITYAELDELSDRFAALLRQRGVGAGDRVAVF 89 (567)
T ss_pred hhHHhhCCcCCCCCCCCCcCcccHHHHHHHHHHHCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 34556666555443 233 2378999999999999999999886 7899999999999999999999999999999999
Q ss_pred cCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCC---CCCC--
Q 009077 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDP---PPEN-- 158 (544)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~-- 158 (544)
++|+++++++++||+++|++++|++|..+...+.++++.++++++++++...+.+.+.......+.+.+.. ....
T Consensus 90 ~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 169 (567)
T PRK06178 90 LPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEP 169 (567)
T ss_pred CCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccc
Confidence 99999999999999999999999999999999999999999999999998877776655443333332211 0000
Q ss_pred --------------CccHHHHHhhcc--CCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCc
Q 009077 159 --------------CLHFSELITQAD--ENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL 222 (544)
Q Consensus 159 --------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~ 222 (544)
...+.+++.... ..........++++++++|||||||.||+|.+||.++.......... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~---~~ 246 (567)
T PRK06178 170 TLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAV---AV 246 (567)
T ss_pred ccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHH---hc
Confidence 001112211111 11112234567999999999999999999999999988765544321 13
Q ss_pred cCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCC
Q 009077 223 YLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSS 302 (544)
Q Consensus 223 ~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~ 302 (544)
.+.++++++..+|++|.+|+...++.++..|+++++.+++++..++..+++++++++.++|..+..+.+........+++
T Consensus 247 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 247 VGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSS 326 (567)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcch
Confidence 46789999999999999998777888999999999999999999999999999999999999999988765544555677
Q ss_pred ceEEEEe--cccCCHHHHHHHHHHCCCCcee-ccccccccCccccccccccC--CCCccCCCeeeeccCCceEEEEcCCC
Q 009077 303 IRTVMSG--AAPMGKELEDAVRAKLPHAKLG-QGYGMTEAGPVLSMCLAFAK--EPFEIKSGACGTVVRNAEMKIVDPDT 377 (544)
Q Consensus 303 l~~~~~~--G~~l~~~~~~~~~~~~~~~~v~-~~yG~tE~~~~~~~~~~~~~--~~~~~~~~~~g~p~~~~~~~i~d~~~ 377 (544)
++.+..+ ++.+++++.+.+++.+ +..++ +.||+||++..+........ .......+.+|.|+|+++++++|+++
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~ 405 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFET 405 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCC
Confidence 8776543 5899999999999998 45555 57999998865443211111 11123456789999999999999878
Q ss_pred CCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHH
Q 009077 378 GISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAML 457 (544)
Q Consensus 378 ~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l 457 (544)
+.+++.|+.|||+++|++++.||+++++.+...+ .+|||+|||+++++++|++++.||++|+|+.+|.++++.+||+++
T Consensus 406 ~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l 484 (567)
T PRK06178 406 GELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALL 484 (567)
T ss_pred CCcCCCCCceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHH
Confidence 9999999999999999999999999998887776 578999999999999999999999999999999999999999999
Q ss_pred HcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHH
Q 009077 458 IAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKL 537 (544)
Q Consensus 458 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 537 (544)
.++++|.+++|++..++..++.+++++++.++...+.++++++++++++.+++|. +.+++++|+|++||++|+.|++++
T Consensus 485 ~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~ 563 (567)
T PRK06178 485 GQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALA 563 (567)
T ss_pred HhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHH
Confidence 9999999999999988878889999999887777788999999999999999996 888999999999999999999988
Q ss_pred hh
Q 009077 538 AA 539 (544)
Q Consensus 538 ~~ 539 (544)
.+
T Consensus 564 ~~ 565 (567)
T PRK06178 564 EE 565 (567)
T ss_pred Hh
Confidence 64
No 59
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.7e-66 Score=539.73 Aligned_cols=516 Identities=22% Similarity=0.348 Sum_probs=425.5
Q ss_pred CCCCCCHHHHHHhhhccCCCccEEEeCC-CCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 21 IPNHLPLHTYCFENISQFADRPCIINGP-TGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 21 ~~~~~~~~~~l~~~a~~~p~~~a~~~~~-~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
.+.++|+.+.|++.++.+|++.|+++.. ..+.+||+||.+++.++|++|.+ .|+++||+|+++++|+++++++++||+
T Consensus 6 ~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~ 85 (576)
T PRK05620 6 QDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVA 85 (576)
T ss_pred hcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 4455799999999999999999998643 34789999999999999999996 799999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcE-EEEeCCCC-----------CCCccHHHH
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GAR-IVTIDPPP-----------ENCLHFSEL 165 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~-~v~~~~~~-----------~~~~~~~~~ 165 (544)
++|++++|++|.++.+.+.++++.++++++|+++.....+.+..... ..+ ++.++... ....+|.++
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (576)
T PRK05620 86 CMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEAL 165 (576)
T ss_pred hcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHH
Confidence 99999999999999999999999999999999988777666554433 222 33333210 123346666
Q ss_pred HhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHH
Q 009077 166 ITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (544)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 245 (544)
+... ....+.....++++++++|||||||.||+|.++|.++......... ...+++.+++++++.+|++|.+++ ..
T Consensus 166 ~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~pl~h~~g~-~~ 241 (576)
T PRK05620 166 LDGR-STVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRT--TDSLAVTHGESFLCCVPIYHVLSW-GV 241 (576)
T ss_pred hhcC-CCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhh--hhhcCCCCCCeEEEeCChHHhhhh-HH
Confidence 4322 2222233456789999999999999999999999998654432211 113467889999999999999988 55
Q ss_pred HHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHH
Q 009077 246 LLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAK 324 (544)
Q Consensus 246 ~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~ 324 (544)
++.++..|+++++.. .+++..+++.+++++++++.++|+++..++...........++|.++++|+++++++.+.+++.
T Consensus 242 ~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~ 321 (576)
T PRK05620 242 PLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEER 321 (576)
T ss_pred HHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHH
Confidence 678889999988865 4789999999999999999999999988876543333334689999999999999999999999
Q ss_pred CCCCceeccccccccCccccccccccC---CCCccCCCeeeeccCCceEEEEcCCCCCCC--CCCCceeEEEecCccccc
Q 009077 325 LPHAKLGQGYGMTEAGPVLSMCLAFAK---EPFEIKSGACGTVVRNAEMKIVDPDTGISL--PRNQAGEICIRGAQIMKG 399 (544)
Q Consensus 325 ~~~~~v~~~yG~tE~~~~~~~~~~~~~---~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~--~~g~~Gel~v~~~~~~~g 399 (544)
+ ++++++.||+||++.++........ ........+.|++.++++++++|+ +..+ +++..|||+++|++++.|
T Consensus 322 ~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~--g~~~~~~~~~~Gel~v~g~~~~~g 398 (576)
T PRK05620 322 Y-GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND--GQVMESTDRNEGEIQVRGNWVTAS 398 (576)
T ss_pred h-CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--CccccCCCCCceEEEEEcCccccc
Confidence 8 7899999999999876554321110 001112346789999999999984 5555 356889999999999999
Q ss_pred ccCChhhh----------------hhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCc
Q 009077 400 YLNDREAT----------------ETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNI 463 (544)
Q Consensus 400 y~~~~~~~----------------~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v 463 (544)
|+++++.+ ...+..++||+|||+++++++|.+++.||.+|+|+.+|.++++.+||++|.++|.|
T Consensus 399 Y~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v 478 (576)
T PRK05620 399 YYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEV 478 (576)
T ss_pred ccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCc
Confidence 99988766 22344679999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeeeCCCCCceEEEEEEecCCCC---CCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 464 SDAAVVPMKDEAAGEVPVAFVVRSNGSK---ITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 464 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
.+++|++.+++..++.+++++++.++.. ...++++++++++|+.+++|..++++++||+|++||++|++|++++.++
T Consensus 479 ~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 479 VECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADG 558 (576)
T ss_pred eEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhcC
Confidence 9999999999888889999988876643 3568999999999999999999999999999999999999999999988
Q ss_pred ccC
Q 009077 541 DLR 543 (544)
Q Consensus 541 ~~~ 543 (544)
+++
T Consensus 559 ~~~ 561 (576)
T PRK05620 559 DFE 561 (576)
T ss_pred Ccc
Confidence 765
No 60
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-66 Score=529.42 Aligned_cols=482 Identities=27% Similarity=0.422 Sum_probs=411.2
Q ss_pred HhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCC
Q 009077 32 FENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY 111 (544)
Q Consensus 32 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 111 (544)
+.+++.+||++|+.+...+..+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 45678899999998754578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhcc-CCCCCccCCCCCCEEEEecC
Q 009077 112 TPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQAD-ENEIPAVKINPDDVVALPYS 190 (544)
Q Consensus 112 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~T 190 (544)
+.+.+.++++.++++++++++..... ... ...++++..... ..........++++++++||
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~--------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 143 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG--------RTD----------VEDLAAFIASADALEPADTPSIPPERVSLILFT 143 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc--------ccc----------ccchhhhhhhccccccccCCCCCCCCceEEEeC
Confidence 99999999999999999997654221 000 011222211110 11111223456889999999
Q ss_pred CCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHH
Q 009077 191 SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMEL 270 (544)
Q Consensus 191 SGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~ 270 (544)
|||||.||++.++|+++...+..... ...+..++++++.+|++|.++++..+..++..|+++++.+.+++..++..
T Consensus 144 SGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 219 (488)
T PRK09088 144 SGTSGQPKGVMLSERNLQQTAHNFGV----LGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGR 219 (488)
T ss_pred CCCCCCCcEEEEehHHHHHHHHHHHH----hhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHH
Confidence 99999999999999999876665543 23467899999999999999998888899999999999988899999888
Q ss_pred HH--hccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcccccccc
Q 009077 271 VQ--KYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLA 348 (544)
Q Consensus 271 i~--~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~ 348 (544)
+. ++++|++.++|+++..+.+........+++++.+++||++++.+..+.+.+. ++.+++.||+||++.+......
T Consensus 220 ~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~ 297 (488)
T PRK09088 220 LGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVD 297 (488)
T ss_pred HHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCC
Confidence 86 4889999999999999987655455567899999999999999888887764 7899999999999865432211
Q ss_pred ccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCC
Q 009077 349 FAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDD 428 (544)
Q Consensus 349 ~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~ 428 (544)
........+++|.|.++++++++| +++.+++.|+.|||+++|++++.||+++++.+...++.+|||+|||+|+++++
T Consensus 298 --~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~ 374 (488)
T PRK09088 298 --CDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDAD 374 (488)
T ss_pred --cccccccCCccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCC
Confidence 111123457899999999999999 56888999999999999999999999999988888878999999999999999
Q ss_pred CcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCC
Q 009077 429 DELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFY 508 (544)
Q Consensus 429 g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~ 508 (544)
|.+++.||.+|+|+.+|.++++.+||++|.+++.|.+++|+++.++..++..++++++.++...+.+++.+++++.++.+
T Consensus 375 g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~ 454 (488)
T PRK09088 375 GFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTRLAKY 454 (488)
T ss_pred CcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhhCcCC
Confidence 99999999999999999999999999999999999999999998877788888998887766677899999999999999
Q ss_pred CcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 509 KRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 509 ~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
++|..+.++++||+|++||++|++|++++.++
T Consensus 455 ~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 455 KVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred CCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 99999999999999999999999999998765
No 61
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.4e-65 Score=532.39 Aligned_cols=495 Identities=24% Similarity=0.380 Sum_probs=424.9
Q ss_pred CHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEe
Q 009077 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (544)
Q Consensus 26 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (544)
++.+++.+.++++|+++|+.+. ++.+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v 78 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH--DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFV 78 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEE
Confidence 4778999999999999999986 68999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-C-cEEEEeCCCC------CCCccHHHHHhhccCCCCCcc
Q 009077 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-G-ARIVTIDPPP------ENCLHFSELITQADENEIPAV 177 (544)
Q Consensus 106 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~-~~~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 177 (544)
|+++.++.+.+..+++.++++++++++.....+....... . ..++.++... .....|+++..... .....
T Consensus 79 ~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 156 (515)
T TIGR03098 79 PINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGD--ADPPH 156 (515)
T ss_pred eCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhcccc--ccccC
Confidence 9999999999999999999999999887766655443322 1 2344444322 12234555532221 11223
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
....+++++++|||||||.||+|.+||.++...+..... .+.+.++|++++.+|++|.+++ ..++.++..|++++
T Consensus 157 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~ 231 (515)
T TIGR03098 157 PVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVAT----YLENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGATVV 231 (515)
T ss_pred CCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHH----HhCCCcccEEEEECchhhHhHH-HHHHHHHHcCCEEE
Confidence 345689999999999999999999999999887776654 3457889999999999999988 56889999999999
Q ss_pred EccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccccc
Q 009077 258 IMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT 337 (544)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~t 337 (544)
+.+.+++..+++.++++++|++.++|+++..|.+.... ...++++|.++++|+++++++.+.+++.++++.+++.||+|
T Consensus 232 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~t 310 (515)
T TIGR03098 232 LHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP-ESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLT 310 (515)
T ss_pred EcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-CCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccc
Confidence 99889999999999999999999999999998875322 23567899999999999999999999999889999999999
Q ss_pred ccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCC----
Q 009077 338 EAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDK---- 413 (544)
Q Consensus 338 E~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---- 413 (544)
|++..... .........+++|+|+++++++++| +++.+++.|+.|||+++|+.++.||++++..+...+..
T Consensus 311 E~~~~~~~----~~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 385 (515)
T TIGR03098 311 EAFRSTYL----PPEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPR 385 (515)
T ss_pred cccceEec----ccccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCc
Confidence 98754332 1122234567899999999999999 46888999999999999999999999988777655432
Q ss_pred -------CCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEe
Q 009077 414 -------EGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVR 486 (544)
Q Consensus 414 -------~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 486 (544)
++||+|||+++++++|++++.||.+|+|+.+|.++++.+||++|.++|.|.+++|++++++..++.++++++.
T Consensus 386 ~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~ 465 (515)
T TIGR03098 386 PGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTP 465 (515)
T ss_pred cccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEe
Confidence 3589999999999999999999999999999999999999999999999999999999998889999999887
Q ss_pred cCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHh
Q 009077 487 SNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 487 ~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
.++...+.++++++++++++.+++|..+++++.||+|.+||++|++|++
T Consensus 466 ~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 466 PGGEELDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred CCCCCCCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 7666778899999999999999999999999999999999999999975
No 62
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-66 Score=542.55 Aligned_cols=507 Identities=19% Similarity=0.261 Sum_probs=401.0
Q ss_pred CCCCCCCHHHHHHhhhccCCCccEEEeCCCC---ceeeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEE
Q 009077 20 YIPNHLPLHTYCFENISQFADRPCIINGPTG---DVYTYADVELTSRKVAAGLSKL---GVQKG-----------DVIML 82 (544)
Q Consensus 20 ~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~~---g~~~g-----------~~V~i 82 (544)
+.....|+.++|.+.++++|+++|+++...+ +.+||+|+.++++++|++|.+. |+++| |+|+|
T Consensus 56 ~~~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i 135 (746)
T PTZ00342 56 SLYVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGL 135 (746)
T ss_pred cccccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEE
Confidence 3444689999999999999999999874322 6899999999999999999974 99998 99999
Q ss_pred EcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-C-cEEEEeCCCCCC--
Q 009077 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-G-ARIVTIDPPPEN-- 158 (544)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~-- 158 (544)
+++|+++|+++.+||+++|+++||+++.++.+++.++|+++++++++++.+..+.+....... . ..+++++.....
T Consensus 136 ~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~ 215 (746)
T PTZ00342 136 YGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKE 215 (746)
T ss_pred EcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCcccc
Confidence 999999999999999999999999999999999999999999999999887777766654433 2 245555432110
Q ss_pred ------------------C-------------------------------ccHHHHHhhc----------------cCCC
Q 009077 159 ------------------C-------------------------------LHFSELITQA----------------DENE 173 (544)
Q Consensus 159 ------------------~-------------------------------~~~~~~~~~~----------------~~~~ 173 (544)
. ..|+++.... ....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 295 (746)
T PTZ00342 216 ININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTN 295 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccC
Confidence 0 0111121100 0111
Q ss_pred CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhC
Q 009077 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (544)
Q Consensus 174 ~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g 253 (544)
.+.....+++++.|+|||||||.||||.+||+++.+.+....... .....+.++.++.+|++|.+++. ..+.++..|
T Consensus 296 ~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~--~~~~~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G 372 (746)
T PTZ00342 296 YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS--IFKKYNPKTHLSYLPISHIYERV-IAYLSFMLG 372 (746)
T ss_pred CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc--cccCCCCCeEEEeCcHHHHHHHH-HHHHHHHcC
Confidence 122345689999999999999999999999999988876543211 11123458999999999999984 566789999
Q ss_pred cEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhc--------CCCCC----------------------------
Q 009077 254 AAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKS--------GDVDK---------------------------- 297 (544)
Q Consensus 254 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~--------~~~~~---------------------------- 297 (544)
+++++.+. ++..+++.++++++|++.++|.++.++.+. .....
T Consensus 373 ~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v 451 (746)
T PTZ00342 373 GTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHI 451 (746)
T ss_pred CEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHH
Confidence 99988765 899999999999999999999999888652 10000
Q ss_pred ------CCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeecc-CCceE
Q 009077 298 ------YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEM 370 (544)
Q Consensus 298 ------~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~ 370 (544)
.-..++|.+++||+++++++.++++..+ ++.+++.||+||+++..+.. .......+++|.|+ |++++
T Consensus 452 ~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~-----~~~~~~~gsvG~p~~pg~e~ 525 (746)
T PTZ00342 452 SSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQ-----HADDNNTESIGGPISPNTKY 525 (746)
T ss_pred HHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeec-----cCCCCCcccccCcCCCcEEE
Confidence 0025899999999999999999999988 89999999999997655432 22234668999998 99999
Q ss_pred EEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEe-CceeeC
Q 009077 371 KIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKF-KGFQVA 449 (544)
Q Consensus 371 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~ 449 (544)
+++|.++......++.|||+++||+++.||+++++.+...++.+|||+|||+|++++||++++.||++|+|+. +|++|+
T Consensus 526 ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~ 605 (746)
T PTZ00342 526 KVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIE 605 (746)
T ss_pred EEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEc
Confidence 9998654444445567999999999999999999999999988999999999999999999999999999996 899999
Q ss_pred cHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCC--------------CCC---CH-----------HHHHH--
Q 009077 450 PAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNG--------------SKI---TE-----------DEIKQ-- 499 (544)
Q Consensus 450 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--------------~~~---~~-----------~~l~~-- 499 (544)
|.+||+++.++|.|.+++|++.. ....++|+|++.+. ... +. .++.+
T Consensus 606 p~eIE~~l~~~p~V~~~~VvG~~---~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v 682 (746)
T PTZ00342 606 TDMLNNLYSQISFINFCVVYGDD---SMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYV 682 (746)
T ss_pred hHHHHHHHhcCCCccEEEEEccC---CccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHH
Confidence 99999999999999999999842 23468888887642 000 00 01122
Q ss_pred --HH-----HhcccCCCcccEEEEec-CC----CCCCCcccchHHHHhHHhh
Q 009077 500 --YI-----SKQVVFYKRINRVFFTD-SI----PKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 500 --~l-----~~~l~~~~~p~~~~~~~-~l----P~t~~GK~~r~~l~~~~~~ 539 (544)
.+ +..|+.+.+++.|.++. .+ -+|++.|++|..+.+.|..
T Consensus 683 ~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~ 734 (746)
T PTZ00342 683 KGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAF 734 (746)
T ss_pred HHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHH
Confidence 22 22588899999888884 22 3899999999999998873
No 63
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-65 Score=531.82 Aligned_cols=508 Identities=25% Similarity=0.392 Sum_probs=421.7
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 25 LPLHTYCFENISQFADRPCIINGPT--GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
.++.++|++.++.+|+..++.+... .+.+||.||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 4889999999999999888875322 26899999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcE-EEEeCCCC------CCCccHHHHHhhccCCCC
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GAR-IVTIDPPP------ENCLHFSELITQADENEI 174 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~-~v~~~~~~------~~~~~~~~~~~~~~~~~~ 174 (544)
+++|++|.++.+++..+++.++++++++++...+.+.++.... ..+ ++.+.... .....++++..... ...
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ 168 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQD-GDY 168 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcccC-CCc
Confidence 9999999999999999999999999999988777665544332 222 22222111 12344555533221 111
Q ss_pred CccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCc
Q 009077 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGA 254 (544)
Q Consensus 175 ~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~ 254 (544)
.....+++++++++|||||||.||+|.+||.++....... .....+++.++|++++..|++|.+++ ...+.++..|+
T Consensus 169 ~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~--~~~~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~G~ 245 (539)
T PRK07008 169 DWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGA--ALPDAMGLSARDAVLPVVPMFHVNAW-GLPYSAPLTGA 245 (539)
T ss_pred CcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHh--hcccccCCCCCceEEecCchHHhhhH-HHHHHHHhcCc
Confidence 2234567899999999999999999999999986433221 11224567889999999999998776 45567788999
Q ss_pred EEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecc
Q 009077 255 AILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (544)
Q Consensus 255 ~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~ 333 (544)
++++.. .+++..+++.++++++|++.++|+.+..+++........++++|.++++|+++++++++.+++.+ ++.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~ 324 (539)
T PRK07008 246 KLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHA 324 (539)
T ss_pred eEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCceecc
Confidence 998864 57899999999999999999999999999987766666788999999999999999999999999 8999999
Q ss_pred ccccccCccccccccccCC------CCccCCCeeeeccCCceEEEEcCCCCCCCCCC--CceeEEEecCcccccccCChh
Q 009077 334 YGMTEAGPVLSMCLAFAKE------PFEIKSGACGTVVRNAEMKIVDPDTGISLPRN--QAGEICIRGAQIMKGYLNDRE 405 (544)
Q Consensus 334 yG~tE~~~~~~~~~~~~~~------~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~ 405 (544)
||+||++..++.+...... .........|.|+|+++++++|+ ++.+++.+ +.|||+++|+.+..||++++.
T Consensus 325 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~ 403 (539)
T PRK07008 325 WGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGD-DGRELPWDGKAFGDLQVRGPWVIDRYFRGDA 403 (539)
T ss_pred cccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECC-CCCccCCCCCcceEEEEeCCccchhhcCChh
Confidence 9999998765543211100 01112467899999999999994 66777643 579999999999999999873
Q ss_pred hhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEE
Q 009077 406 ATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVV 485 (544)
Q Consensus 406 ~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 485 (544)
..+ .+|||+|||++++++||++++.||++|+|+.+|.+++|.+||+.+..+|.|.++++++++++..++.++++|+
T Consensus 404 ---~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~ 479 (539)
T PRK07008 404 ---SPL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVV 479 (539)
T ss_pred ---hhh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEE
Confidence 233 3689999999999999999999999999999999999999999999999999999999998888888999988
Q ss_pred ecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhccc
Q 009077 486 RSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDL 542 (544)
Q Consensus 486 ~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 542 (544)
..++...+.++++++++++++.|+.|..++++++||+|++||++|++|++++.+..|
T Consensus 480 ~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~ 536 (539)
T PRK07008 480 KRPGAEVTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVL 536 (539)
T ss_pred eCCCCccCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 887777788999999999999999999999999999999999999999999987665
No 64
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.7e-65 Score=532.39 Aligned_cols=499 Identities=25% Similarity=0.402 Sum_probs=421.3
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
...++.+.+.++++ |+++|+++. ++.+||+||++++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 23 ~~~~~~~~~~~~a~--p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~ 98 (536)
T PRK10946 23 QDLPLTDILTRHAA--SDAIAVICG--ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGV 98 (536)
T ss_pred cCccHHHHHHHhhC--CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCe
Confidence 46799999999887 999999986 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchh-----HHHHHHHhhc-CcEEEEeCCCCCCCccHHHHHhhccCCCCCc
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEHH-GARIVTIDPPPENCLHFSELITQADENEIPA 176 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (544)
+++++.+.....++..+++.++++.++++.... .....+.... ..+.+.+... .....+.+.+.... ...+.
T Consensus 99 v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 176 (536)
T PRK10946 99 APVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLND-DGEHSLDDAINHPA-EDFTA 176 (536)
T ss_pred EEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecC-CCCccHHHHhhCcc-ccccc
Confidence 888777777778899999999999999986531 1122222211 2344443322 23334555533222 22223
Q ss_pred cCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHH-HHHHHHHhCcE
Q 009077 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNS-VLLCALRVGAA 255 (544)
Q Consensus 177 ~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~g~~ 255 (544)
....++++++++|||||||.||+|.++|+++...+..... .+++.+++++++.+|++|.+++.. .++.++..|++
T Consensus 177 ~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~ 252 (536)
T PRK10946 177 TPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE----ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGT 252 (536)
T ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH----hcCCCCCceEEEecCccccccchhhhHHHHhhcCcE
Confidence 3456789999999999999999999999999888876654 345788999999999999888743 57888999999
Q ss_pred EEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcC--CCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecc
Q 009077 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG--DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (544)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~--~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~ 333 (544)
+++.+.+++..+++.+++++++++.++|..+..+++.. ......+++++.+++||+++++++.+.+.+.+ ++++++.
T Consensus 253 ~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~ 331 (536)
T PRK10946 253 VVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQV 331 (536)
T ss_pred EEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEe
Confidence 99988889999999999999999999999999998763 22334567899999999999999999999998 8999999
Q ss_pred ccccccCccccccccccCCCCccCCCeeeecc-CCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC
Q 009077 334 YGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID 412 (544)
Q Consensus 334 yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 412 (544)
||+||+..... .. .........+.|.|+ +++.++++| +++++++.|+.|||+++|+.++.||+++++.+...++
T Consensus 332 YG~tE~~~~~~-~~---~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~ 406 (536)
T PRK10946 332 FGMAEGLVNYT-RL---DDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFD 406 (536)
T ss_pred ecccccceeee-cC---CCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhcc
Confidence 99999653222 11 112233457889998 799999999 5688999999999999999999999999999888888
Q ss_pred CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCC
Q 009077 413 KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKI 492 (544)
Q Consensus 413 ~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 492 (544)
.++||+|||+++++++|++++.||.+|+++.+|.++++.+||+.|.++++|.+++|++.+++..++.+++++++.++ .
T Consensus 407 ~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~--~ 484 (536)
T PRK10946 407 ANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP--L 484 (536)
T ss_pred cCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC--C
Confidence 89999999999999999999999999999999999999999999999999999999999988888889999887654 7
Q ss_pred CHHHHHHHHHhc-ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 493 TEDEIKQYISKQ-VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 493 ~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
+.+++.++++.. ++.|++|..+.+++++|+|++||++|++|++++..
T Consensus 485 ~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~ 532 (536)
T PRK10946 485 KAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLAS 532 (536)
T ss_pred CHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHh
Confidence 788999999876 99999999999999999999999999999988654
No 65
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.8e-66 Score=551.40 Aligned_cols=496 Identities=24% Similarity=0.340 Sum_probs=403.6
Q ss_pred CCHHHHHHhhhccCCC-ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 25 LPLHTYCFENISQFAD-RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.|+.+.|.+.++++|+ ++|+.+. +.+.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++
T Consensus 204 ~t~~~~l~~~~~~~p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~v 281 (718)
T PRK08043 204 ETLYEALLSAQYRYGAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRRI 281 (718)
T ss_pred CCHHHHHHHHHHHhCCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCCc
Confidence 6899999999999998 5777643 247899999999999999999987 599999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHH--HHHhhc-CcEEEEeCCCCCCCccHHHH-H--hhccCCCCCcc
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVR--DLSEHH-GARIVTIDPPPENCLHFSEL-I--TQADENEIPAV 177 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 177 (544)
++|+++.++.+++.++++.+++++++++.+..+... ...... ....+.++... ....+.+. . ...........
T Consensus 282 ~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 360 (718)
T PRK08043 282 PAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLK-DDVTTADKLWIFAHLLMPRLAQV 360 (718)
T ss_pred ccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhh-hhcchhHHHHHHHHHhCCccccC
Confidence 999999999999999999999999999877544211 111111 12333332211 11111110 0 00000111112
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
...++++++++|||||||.||+|.++|.++...+..... .+++.++|++++.+|++|.+++...++.++..|++++
T Consensus 361 ~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv 436 (718)
T PRK08043 361 KQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT----IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVF 436 (718)
T ss_pred CCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH----hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEE
Confidence 346799999999999999999999999999887766554 3457899999999999999998778889999999999
Q ss_pred EccC-cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccc
Q 009077 258 IMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (544)
Q Consensus 258 ~~~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~ 336 (544)
+.+. ++...+++.+.++++|++.++|+++..+.+.. ...+++++|.+++||+++++++.+.+++.| ++++++.||+
T Consensus 437 ~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~ 513 (718)
T PRK08043 437 LYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGV 513 (718)
T ss_pred EeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCc
Confidence 8764 56778899999999999999999998876643 234578999999999999999999999998 8999999999
Q ss_pred cccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCC--hhh-------h
Q 009077 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLND--REA-------T 407 (544)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~--~~~-------~ 407 (544)
||++.+++.. .+.....+++|+|+|+++++++|.+ + .++.|||+++|++++.||+++ ++. +
T Consensus 514 TE~~~~~~~~-----~~~~~~~~svG~p~pg~~~~i~d~~-~----~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~ 583 (718)
T PRK08043 514 TECAPVVSIN-----VPMAAKPGTVGRILPGMDARLLSVP-G----IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAEN 583 (718)
T ss_pred ccccceEEec-----CCcccCCCCCCCcCCCCeeEEecCC-C----CCCceEEEEecCCccccccCCCCccccccccccc
Confidence 9998655432 1123356889999999999999843 2 245699999999999999984 331 1
Q ss_pred hhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEec
Q 009077 408 ETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRS 487 (544)
Q Consensus 408 ~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 487 (544)
......+|||+|||+|++++||++++.||++|+|+.+|++|+|.+||+++.+++.+.+++|++.+++..++.+++++.
T Consensus 584 ~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~-- 661 (718)
T PRK08043 584 ARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT-- 661 (718)
T ss_pred ccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc--
Confidence 112235799999999999999999999999999999999999999999999999888999998888888888887764
Q ss_pred CCCCCCHHHHHHHHHhc-ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcccC
Q 009077 488 NGSKITEDEIKQYISKQ-VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 488 ~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
+...+.++++++++++ ++.|++|..+.+++++|+|++||++|++|++++.+.++.
T Consensus 662 -~~~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 717 (718)
T PRK08043 662 -DSELTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEPEQH 717 (718)
T ss_pred -CcccCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhccccC
Confidence 3456788999999887 999999999999999999999999999999999887654
No 66
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=8.5e-66 Score=543.89 Aligned_cols=506 Identities=23% Similarity=0.319 Sum_probs=396.6
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeC---C--CC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 009077 22 PNHLPLHTYCFENISQFADRPCIING---P--TG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~---~--~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (544)
++..|+.+.|.+.++++|+++|+.+. + .+ +++||+||.++++++|++|.++|+++||+|+|+++|+++|++++
T Consensus 40 ~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 119 (660)
T PLN02861 40 ADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAM 119 (660)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 45579999999999999999999642 1 12 47999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc--Cc-EEEEeCCCCC-----------CCc
Q 009077 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GA-RIVTIDPPPE-----------NCL 160 (544)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~-~~v~~~~~~~-----------~~~ 160 (544)
|||+++|+++||+++.++.+++.+++++++++++|+++.....+....... .. .++.++.... ...
T Consensus 120 lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 199 (660)
T PLN02861 120 EACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCF 199 (660)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEE
Confidence 999999999999999999999999999999999999877665554433322 12 3444443210 123
Q ss_pred cHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCC-CccCCCCeEEEEecchhhH
Q 009077 161 HFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENP-NLYLHKEDVILCVLPLFHI 239 (544)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~ 239 (544)
++++++..... ........++++++++|||||||.||+|.+||.++...+......+.. ...+.++|++++.+|++|.
T Consensus 200 ~~~~~~~~~~~-~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 278 (660)
T PLN02861 200 SWEEFSLMGSL-DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHV 278 (660)
T ss_pred EHHHHHHhCcc-cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHH
Confidence 56655432211 112224568999999999999999999999999998876654432210 0124688999999999999
Q ss_pred HhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcC--------------------------
Q 009077 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG-------------------------- 293 (544)
Q Consensus 240 ~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-------------------------- 293 (544)
++.+. .+.++..|+++++.. .++..+++.++++++|++.++|+++..+.+..
T Consensus 279 ~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~ 356 (660)
T PLN02861 279 YDQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNL 356 (660)
T ss_pred HHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99854 455789999998874 68899999999999999999999998886410
Q ss_pred -----------CCCCC-------CC-CCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCC
Q 009077 294 -----------DVDKY-------DM-SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (544)
Q Consensus 294 -----------~~~~~-------~l-~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~ 354 (544)
..... .+ .++|.+++||+++++++.+ +.+.++...+++.||+||+++.++... ...
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~----~~~ 431 (660)
T PLN02861 357 RKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSI----ANV 431 (660)
T ss_pred hcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecc----ccc
Confidence 00000 11 4789999999999999855 556664457999999999976544321 111
Q ss_pred ccCCCeeeeccCCceEEEEcC-CCC-CCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEE
Q 009077 355 EIKSGACGTVVRNAEMKIVDP-DTG-ISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELF 432 (544)
Q Consensus 355 ~~~~~~~g~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~ 432 (544)
....+++|+|+|+++++++|. +.+ ..++.++.|||+++|++++.||+++++.+...| .+|||+|||+|++++||+++
T Consensus 432 ~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~ 510 (660)
T PLN02861 432 FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHTGDIGEWQPNGAMK 510 (660)
T ss_pred CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcccCceEEECCCCcEE
Confidence 224578999999999999983 333 334556789999999999999999999999888 58999999999999999999
Q ss_pred EEccccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCC--------C--CCCH-------
Q 009077 433 IVDRLKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNG--------S--KITE------- 494 (544)
Q Consensus 433 ~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--------~--~~~~------- 494 (544)
+.||++|+||. +|++|+|.+||++|.++|.|.+++|++.+ .++.++++|++.+. . ..+.
T Consensus 511 i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~ 587 (660)
T PLN02861 511 IIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNL 587 (660)
T ss_pred EEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCH
Confidence 99999999997 89999999999999999999999999865 34678899887532 0 0111
Q ss_pred ---HHHHHHHHh-----cccCCCcccEEEEec-CC-----CCCCCcccchHHHHhHHhh
Q 009077 495 ---DEIKQYISK-----QVVFYKRINRVFFTD-SI-----PKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 495 ---~~l~~~l~~-----~l~~~~~p~~~~~~~-~l-----P~t~~GK~~r~~l~~~~~~ 539 (544)
..+.+.+++ .++.+..++.+.+++ .+ .+|+++|++|..+.+.|++
T Consensus 588 ~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02861 588 KARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKD 646 (660)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHH
Confidence 123444433 378889999888865 45 7999999999999999875
No 67
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=9.4e-67 Score=634.29 Aligned_cols=499 Identities=21% Similarity=0.337 Sum_probs=428.9
Q ss_pred CCCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 17 PDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
.....+...++.+.|.++++++|+++|++++ ++++||+||.++++++|+.|.+.|+++|++|+++++|+++++++++|
T Consensus 3087 ~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~la 3164 (3956)
T PRK12467 3087 TAAAYPSERLVHQLIEAQVARTPEAPALVFG--DQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLA 3164 (3956)
T ss_pred CCCCCCccccHHHHHHHHHHhCCCcceEeeC--CcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHH
Confidence 3344555679999999999999999999987 78999999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCc
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPA 176 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (544)
|+++|+++||++|.++.+++.++++.+++++++++......+... .....+.++... ........+.
T Consensus 3165 vl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~~~ 3231 (3956)
T PRK12467 3165 VLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP---AGDTALTLDRLD----------LNGYSENNPS 3231 (3956)
T ss_pred HHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc---cCCceeeecchh----------hcccCCCCCc
Confidence 999999999999999999999999999999999987764433211 122333333211 1111122233
Q ss_pred cCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEE
Q 009077 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (544)
Q Consensus 177 ~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~ 256 (544)
....++++++++|||||||.||+|.++|+++.+.+..... .++++++|+++...|++|..+. ..++.++..|+++
T Consensus 3232 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l 3306 (3956)
T PRK12467 3232 TRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAE----AYELDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCL 3306 (3956)
T ss_pred ccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHH----hcCCCcCCEEEEecCccHhHHH-HHHHHHHhCCCEE
Confidence 4467899999999999999999999999999988877665 4568999999999999999886 7789999999999
Q ss_pred EEccC--cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccc
Q 009077 257 LIMQK--FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGY 334 (544)
Q Consensus 257 v~~~~--~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~y 334 (544)
++.+. +++..+++.++++++|++.++|+++..+++... ...++++|.+++|||++++++.+.+.+.++++++++.|
T Consensus 3307 ~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~Y 3384 (3956)
T PRK12467 3307 VVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGY 3384 (3956)
T ss_pred EECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCc
Confidence 99875 689999999999999999999999999987543 33567899999999999999999999988889999999
Q ss_pred cccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCC
Q 009077 335 GMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKE 414 (544)
Q Consensus 335 G~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 414 (544)
|+||++..++...............++|+|++++++.|+| +.+++++.|+.|||+|+|+++++||+++++.+.++|..+
T Consensus 3385 G~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~ 3463 (3956)
T PRK12467 3385 GPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVAD 3463 (3956)
T ss_pred ccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCC
Confidence 9999987665432211111223446899999999999999 578999999999999999999999999999999888554
Q ss_pred -------CceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEec
Q 009077 415 -------GWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRS 487 (544)
Q Consensus 415 -------~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 487 (544)
+||+|||+|++++||++++.||+|++||++|++|++.+||+.|.++|+|.+++|++.. ...++.++++++..
T Consensus 3464 p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~-~~~~~~lva~v~~~ 3542 (3956)
T PRK12467 3464 PFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARD-GAGGKQLVAYVVPA 3542 (3956)
T ss_pred CCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEec-CCCCcEEEEEEeCC
Confidence 4699999999999999999999999999999999999999999999999999999874 34578899999987
Q ss_pred CCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 488 NGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 488 ~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.......++++++++..||.|++|..+++++.||+|++||++|++|.+....
T Consensus 3543 ~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3543 DPQGDWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred CCCcccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 6666778899999999999999999999999999999999999999876544
No 68
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.1e-65 Score=527.11 Aligned_cols=488 Identities=22% Similarity=0.331 Sum_probs=405.4
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.|+.+++.+++ .|+++|+++. +..+||+||.++++++|+.|.+.|+ ++|++|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~ 78 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG--DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYV 78 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCE
Confidence 47888887764 6999999986 7899999999999999999999999 89999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCC
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (544)
++|++|.++.+++.++++.+++++++++++....+.+.. ....+.+.++.. .+.+++... ....+.....+++
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~ 151 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD-LPGVRVLDVDTP-----AYAELVAAA-GALTPHREVDAMD 151 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc-ccCceEEEccch-----hhhhhhccc-cCcCCCCCCCCCC
Confidence 999999999999999999999999999887765554431 112344444321 233332211 1111223356799
Q ss_pred EEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcC
Q 009077 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (544)
Q Consensus 184 ~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~ 263 (544)
+++++|||||||.||+|.++|.++......... .+++.++|+++..+|++|..+++..++.++..|+++++.+.++
T Consensus 152 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~ 227 (540)
T PRK13388 152 PFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE----RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFS 227 (540)
T ss_pred eEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH----HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCC
Confidence 999999999999999999999999877665554 3457899999999999999998777777899999999988889
Q ss_pred HHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccc
Q 009077 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVL 343 (544)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~ 343 (544)
+..+++.++++++|++..+|..+..++............++. + .|+.++++....+.+.+ ++++++.||+||++.++
T Consensus 228 ~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~-~-~G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~ 304 (540)
T PRK13388 228 ASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRV-A-FGNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIV 304 (540)
T ss_pred HHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEE-E-ECCCCCHHHHHHHHHHh-CCceeccccccccccee
Confidence 999999999999999999999999888765432222334553 3 36677888899999988 89999999999998655
Q ss_pred cccccccCCCCccCCCeeeeccCCceEE-----------EEcCCCCCCC-CCCCceeEEEe-cCcccccccCChhhhhhh
Q 009077 344 SMCLAFAKEPFEIKSGACGTVVRNAEMK-----------IVDPDTGISL-PRNQAGEICIR-GAQIMKGYLNDREATETT 410 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~-----------i~d~~~~~~~-~~g~~Gel~v~-~~~~~~gy~~~~~~~~~~ 410 (544)
... .....+++|+|++++++. ++| ++++.+ +++..|||+++ |++++.||+++++.+...
T Consensus 305 ~~~-------~~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~ 376 (540)
T PRK13388 305 VRE-------PGTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAER 376 (540)
T ss_pred ecC-------CCCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHH
Confidence 432 122456889999997653 233 233433 34678999998 999999999999988887
Q ss_pred cCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC
Q 009077 411 IDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS 490 (544)
Q Consensus 411 ~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 490 (544)
+ .+|||+|||+|+++++|++++.||++|+|+.+|++|+|.+||++|.++|+|.+|+|++++++..++.+++++++.++.
T Consensus 377 ~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~ 455 (540)
T PRK13388 377 M-RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGA 455 (540)
T ss_pred h-hcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCC
Confidence 7 679999999999999999999999999999999999999999999999999999999999888888888888888777
Q ss_pred CCCHHHHHHHHHhc--ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 491 KITEDEIKQYISKQ--VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 491 ~~~~~~l~~~l~~~--l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
..+.+++.++++.+ |+.+++|..++++++||+|++||++|++|++...+
T Consensus 456 ~~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~ 506 (540)
T PRK13388 456 TFDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWA 506 (540)
T ss_pred cCCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccC
Confidence 78888999999764 99999999999999999999999999999987654
No 69
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-65 Score=529.28 Aligned_cols=511 Identities=25% Similarity=0.372 Sum_probs=420.6
Q ss_pred CCCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 17 PDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
|+.+++...++.+.|.+.++.+|+++|++.. ++.+||+||++++.++|+.|.+.|+++|++|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la 79 (540)
T PRK06164 2 PHDAAPRADTLASLLDAHARARPDAVALIDE--DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLA 79 (540)
T ss_pred ccccccCCCCHHHHHHHHHHhCCCCeEEecC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 5566777789999999999999999999965 78999999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh-----HHHHHHHhh--cCc-EEEEeCCCCCCC-----ccHH
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN-----DKVRDLSEH--HGA-RIVTIDPPPENC-----LHFS 163 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~--~~~-~~v~~~~~~~~~-----~~~~ 163 (544)
|+++|++++|+++..+.+.+.++++.+++++++++++.. +.+...... ... .++.++...... ..+.
T Consensus 80 ~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (540)
T PRK06164 80 CARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARV 159 (540)
T ss_pred HHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccc
Confidence 999999999999999999999999999999999987642 222221111 111 233333111100 0011
Q ss_pred HHHhhccCCCC---CccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHH
Q 009077 164 ELITQADENEI---PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIY 240 (544)
Q Consensus 164 ~~~~~~~~~~~---~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 240 (544)
........... ......+++++++++||||||.||+|.++|.++......... .+++.+++++++.+|++|.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~ 235 (540)
T PRK06164 160 QLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIAR----AYGYDPGAVLLAALPFCGVF 235 (540)
T ss_pred ccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHH----hcCCCCCCEEEEcCCchhHH
Confidence 11000000000 011234688999999999999999999999999888776655 34578999999999999999
Q ss_pred hhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEec-ccCCHHHHH
Q 009077 241 SLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA-APMGKELED 319 (544)
Q Consensus 241 g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G-~~l~~~~~~ 319 (544)
|+ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.. .....+++++.+..+| .+...++.+
T Consensus 236 g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~ 313 (540)
T PRK06164 236 GF-STLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAA 313 (540)
T ss_pred HH-HHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHH
Confidence 98 57889999999999999899999999999999999999999999998872 3344578888876665 455566777
Q ss_pred HHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeecc-CCceEEEEcCCCCCCCCCCCceeEEEecCcccc
Q 009077 320 AVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVV-RNAEMKIVDPDTGISLPRNQAGEICIRGAQIMK 398 (544)
Q Consensus 320 ~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 398 (544)
++.+. ++++++.||+||++.++...... ..........|.|+ +++.++++|++++.+++.|+.|||+++|++++.
T Consensus 314 ~~~~~--~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~ 389 (540)
T PRK06164 314 LARAR--GVPLTGLYGSSEVQALVALQPAT--DPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMR 389 (540)
T ss_pred HHhhc--CCceecceeeccccceeeccCCC--CCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccc
Confidence 76655 78999999999998765443211 11122234557775 899999999888999999999999999999999
Q ss_pred cccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCc
Q 009077 399 GYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGE 478 (544)
Q Consensus 399 gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~ 478 (544)
||+++++.+...+..++||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||+.|.++++|.+++|+++.. ..++
T Consensus 390 gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~ 468 (540)
T PRK06164 390 GYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKT 468 (540)
T ss_pred cccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCce
Confidence 999999999888888999999999999999999999999999999999999999999999999999999999874 3457
Q ss_pred eEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCc---ccchHHHHhHHhhc
Q 009077 479 VPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSG---KILRKDLRTKLAAG 540 (544)
Q Consensus 479 ~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~G---K~~r~~l~~~~~~~ 540 (544)
.+++++++.++...+.+++.+++++.++.+++|..+++++.+|+|++| |++|+.|++++...
T Consensus 469 ~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~ 533 (540)
T PRK06164 469 VPVAFVIPTDGASPDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQAR 533 (540)
T ss_pred eEEEEEEeCCCCCCCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHh
Confidence 788888887777788899999999999999999999999999999999 99999999987643
No 70
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-65 Score=537.11 Aligned_cols=501 Identities=21% Similarity=0.298 Sum_probs=408.7
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
...|+.+.|.++++++|+++|+++. ++.+||+||+++++++|++|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~ 112 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFE--DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGA 112 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeC--CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 4579999999999999999999986 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcEEEEeCCCCC--CCccHHHHHhhccC--C--CCC
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GARIVTIDPPPE--NCLHFSELITQADE--N--EIP 175 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~~~~~~--~--~~~ 175 (544)
+++|+++.++.+.+.++++.++++++|++++..+.+.+..... ....+.+.+... ....+.++...... . ...
T Consensus 113 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (600)
T PRK08279 113 VVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTTNPAS 192 (600)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCccCCCc
Confidence 9999999999999999999999999999988877766654433 222233322111 12233333221111 1 111
Q ss_pred ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 176 ~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
.....++++++++|||||||.||+|.++|.++...+..... .+.+.++|++++.+|++|..+++..++.++..|++
T Consensus 193 ~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 268 (600)
T PRK08279 193 RSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGG----LLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGAT 268 (600)
T ss_pred ccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHH----hcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcE
Confidence 23356789999999999999999999999999988877665 34588999999999999999998888889999999
Q ss_pred EEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
+++.+.+++..+++.++++++|++.++|+++..+.+..........+++. ++|+.+++++++.+.+.|+...+++.||
T Consensus 269 ~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~~~~~~l~~~YG 346 (600)
T PRK08279 269 LALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRL--MIGNGLRPDIWDEFQQRFGIPRILEFYA 346 (600)
T ss_pred EEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeE--EecCCCCHHHHHHHHHHhCcceeeeeec
Confidence 99999999999999999999999999999999988765544444456665 3578899999999999996667999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeeccC----CceEE---------EEcCC-CCCCCCCCCceeEE--EecCccccc
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVR----NAEMK---------IVDPD-TGISLPRNQAGEIC--IRGAQIMKG 399 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~----~~~~~---------i~d~~-~~~~~~~g~~Gel~--v~~~~~~~g 399 (544)
+||++...... ....++.|.+.+ +..+. +.+.+ ...+++.|+.||++ +.++.++.|
T Consensus 347 ~tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~G 418 (600)
T PRK08279 347 ASEGNVGFINV--------FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDG 418 (600)
T ss_pred ccccceeeccc--------CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCcccccc
Confidence 99988533211 123345565555 33322 22211 11356889999998 779999999
Q ss_pred ccCChhhhhhhc------CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeC
Q 009077 400 YLNDREATETTI------DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKD 473 (544)
Q Consensus 400 y~~~~~~~~~~~------~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~ 473 (544)
| +++..+...+ ..++||+|||+|+++++|++++.||.+|+|+++|++|+|.+||+.|.++|+|.+++|+++++
T Consensus 419 Y-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~ 497 (600)
T PRK08279 419 Y-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVEV 497 (600)
T ss_pred c-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEeec
Confidence 9 7777666553 24689999999999999999999999999999999999999999999999999999999876
Q ss_pred CCC-CceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 474 EAA-GEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 474 ~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
+.. +...+++++..++...+.++++++++++|+.|++|..++++++||+|++||++|.+|++++.+.
T Consensus 498 ~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 498 PGTDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred CCCCCccceeEEEecCCccCCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 643 4445666666656677889999999999999999999999999999999999999999887765
No 71
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.1e-65 Score=528.42 Aligned_cols=509 Identities=25% Similarity=0.383 Sum_probs=422.0
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCC--CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhC
Q 009077 24 HLPLHTYCFENISQFADRPCIINGP--TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (544)
++|+.++++++++++|++++++... ..+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G 88 (542)
T PRK06018 9 PLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIG 88 (542)
T ss_pred CCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcC
Confidence 3699999999999999999998532 23789999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-Cc-EEEEeCCCC-------CCCccHHHHHhhccCC
Q 009077 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GA-RIVTIDPPP-------ENCLHFSELITQADEN 172 (544)
Q Consensus 102 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~-~~v~~~~~~-------~~~~~~~~~~~~~~~~ 172 (544)
++++|++|.++.+.+.++++.++++.++++....+.+.+..... .. .++.+.... .....+.+++.....
T Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (542)
T PRK06018 89 AICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEADG- 167 (542)
T ss_pred eEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccCCc-
Confidence 99999999999999999999999999999988777666554332 22 233322111 122345555333221
Q ss_pred CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHH-HHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHH
Q 009077 173 EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLV-TSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALR 251 (544)
Q Consensus 173 ~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 251 (544)
........++++++++|||||||.||+|.+||.+.. ....... ...+++..+|+++...|++|.+++. ..+.++.
T Consensus 168 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~h~~~~~-~~~~~~~ 243 (542)
T PRK06018 168 DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANN---GDALGTSAADTMLPVVPLFHANSWG-IAFSAPS 243 (542)
T ss_pred ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhh---hhhcCCCCCCEEEEecCHHHHhhhH-HHHhhhh
Confidence 112234567889999999999999999999999743 2221111 1245678899999999999998874 4456788
Q ss_pred hCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCce
Q 009077 252 VGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKL 330 (544)
Q Consensus 252 ~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v 330 (544)
.|+++++.. .+++..+++.++++++|++.++|+++..+.+........++++|.++++|+++++++++.|++ + ++.+
T Consensus 244 ~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~ 321 (542)
T PRK06018 244 MGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEV 321 (542)
T ss_pred cCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCCe
Confidence 999988864 578899999999999999999999999998877666667789999999999999999999999 7 8999
Q ss_pred eccccccccCccccccccccCC------CCccCCCeeeeccCCceEEEEcCCCCCCCCCC--CceeEEEecCcccccccC
Q 009077 331 GQGYGMTEAGPVLSMCLAFAKE------PFEIKSGACGTVVRNAEMKIVDPDTGISLPRN--QAGEICIRGAQIMKGYLN 402 (544)
Q Consensus 331 ~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~~ 402 (544)
++.||+||++.+++.+...... .......+.|+|.++++++++|+ ++..++.+ ..|||+++|+.++.||++
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~-~~~~~~~~~~~~Gel~i~g~~~~~gy~~ 400 (542)
T PRK06018 322 RHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD-AGKELPWDGKTFGRLKVRGPAVAAAYYR 400 (542)
T ss_pred EeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC-CCCCCCCCCCceeEEEEecCCcchhhhc
Confidence 9999999999776544211110 01112357899999999999995 66766643 679999999999999998
Q ss_pred ChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEE
Q 009077 403 DREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVA 482 (544)
Q Consensus 403 ~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 482 (544)
.. ...++.++||+|||+++++++|++++.||.+|+|+.+|.++++.+||..+.++|.|.+++|++..++..++.+.+
T Consensus 401 ~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 477 (542)
T PRK06018 401 VD---GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLL 477 (542)
T ss_pred Cc---ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEE
Confidence 42 234457899999999999999999999999999999999999999999999999999999999999888889999
Q ss_pred EEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcccC
Q 009077 483 FVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 483 ~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
++++.++...+.+++.++++++++.+++|..+.++++||+|++||++|++|+++|.+-++.
T Consensus 478 ~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 538 (542)
T PRK06018 478 IVQLKPGETATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDYKLP 538 (542)
T ss_pred EEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhccCCC
Confidence 9998888778889999999999999999999999999999999999999999999886653
No 72
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.6e-65 Score=538.40 Aligned_cols=504 Identities=24% Similarity=0.386 Sum_probs=399.4
Q ss_pred CCCCCCHHHHHHhhhccCCCccEEEeCC-------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHH
Q 009077 21 IPNHLPLHTYCFENISQFADRPCIINGP-------TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFA 93 (544)
Q Consensus 21 ~~~~~~~~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~ 93 (544)
.+..+|+.+++.++++++|+++|+++.+ ..+.+||+||.++++++|++|.+. +++||+|+++++|+++++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~ 108 (612)
T PRK12476 30 LPPGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAG 108 (612)
T ss_pred CCccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHH
Confidence 3455899999999999999999998632 124899999999999999999986 99999999999999999999
Q ss_pred HHHHHhhCCeEeec-CCCCC--HHHHHHHHHhcCceEEEEecchhHHHHHHHhhc----CcEEEEeCCCCCCCccHHHHH
Q 009077 94 FLGASYIGATSTTA-NPFYT--PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH----GARIVTIDPPPENCLHFSELI 166 (544)
Q Consensus 94 ~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~ 166 (544)
+|||+++|++++|+ ++.++ .+++.++++.++++++|+++...+.+....... ...++.++....
T Consensus 109 ~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------- 179 (612)
T PRK12476 109 FFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD--------- 179 (612)
T ss_pred HHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc---------
Confidence 99999999999999 57766 789999999999999999987766554443221 123343332110
Q ss_pred hhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCcc-CCCCeEEEEecchhhHHhhHHH
Q 009077 167 TQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY-LHKEDVILCVLPLFHIYSLNSV 245 (544)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~ 245 (544)
............++++++++|||||||.||+|.++|+++...+..... .++ +.++++.++.+|++|..|+...
T Consensus 180 --~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~~~~~l~~~Pl~h~~g~~~~ 253 (612)
T PRK12476 180 --SAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMIL----SIDLLDRNTHGVSWLPLYHDMGLSMI 253 (612)
T ss_pred --cccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHH----HhccCCCCceEEEeCCcccccchHHH
Confidence 001111122346789999999999999999999999999876655433 234 5788999999999999998655
Q ss_pred HHHHHHhCcEEEEcc-Cc--CHHHHHHHHH--hccceeccCcHHHHHHHHhcCC----CCCCCCCCceEEEEecccCCHH
Q 009077 246 LLCALRVGAAILIMQ-KF--DIVKLMELVQ--KYKVTVAPFVPPIVLAVAKSGD----VDKYDMSSIRTVMSGAAPMGKE 316 (544)
Q Consensus 246 ~~~~l~~g~~~v~~~-~~--~~~~~~~~i~--~~~~t~l~~~P~~l~~l~~~~~----~~~~~l~~l~~~~~~G~~l~~~ 316 (544)
+..++..|+++++.+ .+ ++..+++.++ +++++++..+|+++..++.... .....++++| +++||++++++
T Consensus 254 ~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~ 332 (612)
T PRK12476 254 GFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSID 332 (612)
T ss_pred HHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHH
Confidence 555565555555543 23 7889999995 5889999999998887776421 1234578899 99999999999
Q ss_pred HHHHHHHHCC-----CCceeccccccccCccccccccccC----------------------CCCccCCCeeeeccCCce
Q 009077 317 LEDAVRAKLP-----HAKLGQGYGMTEAGPVLSMCLAFAK----------------------EPFEIKSGACGTVVRNAE 369 (544)
Q Consensus 317 ~~~~~~~~~~-----~~~v~~~yG~tE~~~~~~~~~~~~~----------------------~~~~~~~~~~g~p~~~~~ 369 (544)
+.+.+.+.|+ ...+++.||+||++...+....... .+.....+++|+|+++++
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~ 412 (612)
T PRK12476 333 AVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQW 412 (612)
T ss_pred HHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCE
Confidence 9999999872 3469999999998755432210000 000012357899999999
Q ss_pred EEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC------------------CCCceecCceEEEcCCCcE
Q 009077 370 MKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID------------------KEGWLHTGDIGYIDDDDEL 431 (544)
Q Consensus 370 ~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~~~~~~TgDl~~~~~~g~l 431 (544)
++|+|++++.+++.|+.|||+++|++++.||+++++.+...|. .++||+|||+|++ ++|++
T Consensus 413 v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l 491 (612)
T PRK12476 413 AVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGEL 491 (612)
T ss_pred EEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEE
Confidence 9999976589999999999999999999999999998877763 2359999999998 59999
Q ss_pred EEEccccceEEeCceeeCcHHHHHHHHc-CCCcce--eEEEeeeCCCCCceEEEEEEecCCC-CCCHHHHHHHHHhccc-
Q 009077 432 FIVDRLKELIKFKGFQVAPAELEAMLIA-HPNISD--AAVVPMKDEAAGEVPVAFVVRSNGS-KITEDEIKQYISKQVV- 506 (544)
Q Consensus 432 ~~~GR~~d~i~~~G~~v~~~~ie~~l~~-~~~v~~--~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~- 506 (544)
++.||++|+|+++|++|+|.+||+.|.+ +|.|.+ +++++++++. ++.+++++++.++. ..+.++|.++++..+.
T Consensus 492 ~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~ 570 (612)
T PRK12476 492 YITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAPAIDAIRAAVSR 570 (612)
T ss_pred EEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999985 799999 6677777766 78889998887664 3577888889988887
Q ss_pred CCCc-ccEEEEec--CCCCCCCcccchHHHHhHHhhcccC
Q 009077 507 FYKR-INRVFFTD--SIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 507 ~~~~-p~~~~~~~--~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
.+++ |..+.+++ +||+|++||++|++|+++|.++.+.
T Consensus 571 ~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 610 (612)
T PRK12476 571 RHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGRLG 610 (612)
T ss_pred hhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCCCC
Confidence 4777 57777776 6999999999999999999998763
No 73
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3.3e-64 Score=526.52 Aligned_cols=503 Identities=29% Similarity=0.518 Sum_probs=417.2
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLS-KLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.++.+.|.+.++++|+++|+++. ++.+||+||.+++.++|+.|. +.|+++|++|+++++|+++++++++||+++|++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 102 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLT 102 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeE
Confidence 58999999999999999999976 789999999999999999997 589999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcE-EEEeCCC--------------------------C
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGAR-IVTIDPP--------------------------P 156 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~v~~~~~--------------------------~ 156 (544)
++|++|.++..++.++++.++++.+++++.....+.......... ++.++.. .
T Consensus 103 ~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (560)
T PRK08751 103 VVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRI 182 (560)
T ss_pred EeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCC
Confidence 999999999999999999999999999987766655544333222 2221100 0
Q ss_pred CCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCC-CeEEEEecc
Q 009077 157 ENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHK-EDVILCVLP 235 (544)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~p 235 (544)
.....+.+.+........+.....++++++++|||||||.||+|.++|.++..........+...-.+.+ .+++++..|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (560)
T PRK08751 183 NGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALP 262 (560)
T ss_pred CccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecC
Confidence 0112233332221111122334567899999999999999999999999998776654432221111233 357788899
Q ss_pred hhhHHhhHHHHHHHHHhCcEEEE-ccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCC
Q 009077 236 LFHIYSLNSVLLCALRVGAAILI-MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMG 314 (544)
Q Consensus 236 ~~~~~g~~~~~~~~l~~g~~~v~-~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~ 314 (544)
++|.+++....+.++..|++.++ .+..++..+++.+.++++|++.++|.++..+.+........++++|.+++||++++
T Consensus 263 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~ 342 (560)
T PRK08751 263 LYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQ 342 (560)
T ss_pred hHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCC
Confidence 99999886656666666666555 44578999999999999999999999999998876555566789999999999999
Q ss_pred HHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecC
Q 009077 315 KELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 394 (544)
+++.+.+++.+ ++.+++.||+||++..++.+.. ......+++|.|++++.++++| +++.+++.|+.|||+++|+
T Consensus 343 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~----~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~ 416 (560)
T PRK08751 343 RSVAERWKQVT-GLTLVEAYGLTETSPAACINPL----TLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIKGP 416 (560)
T ss_pred HHHHHHHHHHh-CCeEEEeeccccCCCceecccc----cccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecC
Confidence 99999999988 7899999999999876554321 1123346789999999999999 5788999999999999999
Q ss_pred cccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCC
Q 009077 395 QIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDE 474 (544)
Q Consensus 395 ~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~ 474 (544)
.+..||+++++.+...+..+|||+|||+++++++|++++.||.+|+|+.+|.+++|.+||+.|.++++|.+++|+++++.
T Consensus 417 ~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~ 496 (560)
T PRK08751 417 QVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGVPDE 496 (560)
T ss_pred ccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEecCCC
Confidence 99999999999988888788999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 475 AAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 475 ~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
..++.++++++.. +...+.+++++++++.++.++.|..++++++||+|++||++|++|++.
T Consensus 497 ~~ge~~~~~v~~~-~~~~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 497 KSGEIVKVVIVKK-DPALTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred CCCceEEEEEEcC-CCCCCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 8788887777654 455678899999999999999999999999999999999999999876
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.7e-65 Score=575.32 Aligned_cols=507 Identities=26% Similarity=0.369 Sum_probs=423.9
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhC
Q 009077 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (544)
+...++.+.+.+.++++|+++|+++. .++.+||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G 689 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS-TGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAG 689 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcC
Confidence 34478999999999999999999864 35799999999999999999987 48999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHH---h-hcCcEEEEeCCCCCCCcc---HHHHHhhccCCC-
Q 009077 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLS---E-HHGARIVTIDPPPENCLH---FSELITQADENE- 173 (544)
Q Consensus 102 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~-~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~- 173 (544)
++++|++|..+.+++.++++.++++++++++...+.+.+.. . ....+++..+........ +.+.......+.
T Consensus 690 ~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1146)
T PRK08633 690 KVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPAR 769 (1146)
T ss_pred CEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCHH
Confidence 99999999999999999999999999999887666554210 0 012344444332221111 222111110000
Q ss_pred ----CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHH
Q 009077 174 ----IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCA 249 (544)
Q Consensus 174 ----~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~ 249 (544)
.......++++++++|||||||.||+|.++|+++......... .++..++|++++.+|++|.+|+...++.+
T Consensus 770 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~ 845 (1146)
T PRK08633 770 LLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD----VFNLRNDDVILSSLPFFHSFGLTVTLWLP 845 (1146)
T ss_pred HHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH----hcCCCCCCEEEEcCcHHHHHhHHHHHHHH
Confidence 0013456799999999999999999999999999888776654 34578899999999999999997778899
Q ss_pred HHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCC
Q 009077 250 LRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHA 328 (544)
Q Consensus 250 l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 328 (544)
+..|+++++.+ ..++..+++.++++++|++.++|++++.+.+........++++|.+++||+++++++.+.+++.+ ++
T Consensus 846 l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~ 924 (1146)
T PRK08633 846 LLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GI 924 (1146)
T ss_pred HHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CC
Confidence 99999998866 47899999999999999999999999999887665666788999999999999999999999999 89
Q ss_pred ceeccccccccCccccccccccC-----CCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCC
Q 009077 329 KLGQGYGMTEAGPVLSMCLAFAK-----EPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLND 403 (544)
Q Consensus 329 ~v~~~yG~tE~~~~~~~~~~~~~-----~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 403 (544)
++++.||+||++.+++....... .......+++|+|+|+++++++|++++++++.|+.|||+++|++++.||+++
T Consensus 925 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 925 RILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred CeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCC
Confidence 99999999999876654321110 0112346789999999999999988899999999999999999999999999
Q ss_pred hhhhhhhcC---CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCC--CcceeEEEeeeCCCCCc
Q 009077 404 REATETTID---KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHP--NISDAAVVPMKDEAAGE 478 (544)
Q Consensus 404 ~~~~~~~~~---~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~--~v~~~~v~~~~~~~~~~ 478 (544)
++.+.+.+. .++||+|||++++++||++++.||.+|+||.+|++|+|.+||++|.++| .+.+++|++++++..++
T Consensus 1005 ~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~ 1084 (1146)
T PRK08633 1005 PEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGE 1084 (1146)
T ss_pred ccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCc
Confidence 988877763 2399999999999999999999999999999999999999999999998 46779999999988899
Q ss_pred eEEEEEEecCCCCCCHHHHHHHHHh-cccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 479 VPVAFVVRSNGSKITEDEIKQYISK-QVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 479 ~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
.++++++.. ..+.+++++++.+ .++.|++|..+++++++|+|++||++|++|+++..
T Consensus 1085 ~~~~~v~~~---~~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~ 1142 (1146)
T PRK08633 1085 KLVVLHTCG---AEDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELAL 1142 (1146)
T ss_pred EEEEEEecC---ccCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHH
Confidence 999888762 3567889998875 69999999999999999999999999999998754
No 75
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.6e-64 Score=536.24 Aligned_cols=506 Identities=26% Similarity=0.342 Sum_probs=396.1
Q ss_pred CCCCCCHHHHHHhhhccCCCccEEEeC----------CCC-----------ceeeHHHHHHHHHHHHHHHHHcCCCCCCE
Q 009077 21 IPNHLPLHTYCFENISQFADRPCIING----------PTG-----------DVYTYADVELTSRKVAAGLSKLGVQKGDV 79 (544)
Q Consensus 21 ~~~~~~~~~~l~~~a~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~g~~~g~~ 79 (544)
.++-.|+.++|.+.++.+||++|+.+. ..+ ..+||+|+.++++++|++|.+.|+++||+
T Consensus 54 ~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~ 133 (696)
T PLN02387 54 WEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEER 133 (696)
T ss_pred CCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 455579999999999999999999532 012 24899999999999999999999999999
Q ss_pred EEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc--CcEEEEeCCCCC
Q 009077 80 IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GARIVTIDPPPE 157 (544)
Q Consensus 80 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~v~~~~~~~ 157 (544)
|+|+++|+++|+++++||+++|+++||+++.++.+++.++++.++++++|++.+....+.+..... ...++.++....
T Consensus 134 Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~ 213 (696)
T PLN02387 134 VAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGV 213 (696)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCc
Confidence 999999999999999999999999999999999999999999999999999988777666654433 234555554221
Q ss_pred ------------CCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCC
Q 009077 158 ------------NCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH 225 (544)
Q Consensus 158 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~ 225 (544)
....|+++...+.....+.....++++++|+|||||||.||+|.+||+++...+....... ..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~---~~~~ 290 (696)
T PLN02387 214 DSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVV---PKLG 290 (696)
T ss_pred hhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhc---CCCC
Confidence 1234555543332222223345689999999999999999999999999988777654322 2467
Q ss_pred CCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcC--------HHHHHHHHHhccceeccCcHHHHHHHHhcCCCC-
Q 009077 226 KEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD--------IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD- 296 (544)
Q Consensus 226 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~--------~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~- 296 (544)
++|++++.+|++|.+++.. ...++..|+++.+..... +..++..++.+++|++.++|.++.++.+.....
T Consensus 291 ~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~ 369 (696)
T PLN02387 291 KNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKV 369 (696)
T ss_pred CCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHH
Confidence 8999999999999999844 444567787776644321 233566889999999999999999886431100
Q ss_pred ------------------------------CC---------------CC-CCceEEEEecccCCHHHHHHHHHHCCCCce
Q 009077 297 ------------------------------KY---------------DM-SSIRTVMSGAAPMGKELEDAVRAKLPHAKL 330 (544)
Q Consensus 297 ------------------------------~~---------------~l-~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v 330 (544)
.. .+ .++|.+++||+++++++.+.++..+ ++.+
T Consensus 370 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v 448 (696)
T PLN02387 370 DAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPI 448 (696)
T ss_pred hcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCe
Confidence 00 01 5799999999999999998888888 8999
Q ss_pred eccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcC-CCCCCC--CCCCceeEEEecCcccccccCChhhh
Q 009077 331 GQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDP-DTGISL--PRNQAGEICIRGAQIMKGYLNDREAT 407 (544)
Q Consensus 331 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~~~~--~~g~~Gel~v~~~~~~~gy~~~~~~~ 407 (544)
++.||+||++..++.. .......+++|.|+|+++++++|. +.+... .++..|||+++|++++.||+++++.+
T Consensus 449 ~~~YG~TEt~~~~~~~-----~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T 523 (696)
T PLN02387 449 GQGYGLTETCAGATFS-----EWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKT 523 (696)
T ss_pred eEeechhhcccceeec-----CcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHH
Confidence 9999999998665543 112335678999999999999984 333332 23457999999999999999999999
Q ss_pred hhhc--CCCC--ceecCceEEEcCCCcEEEEccccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEE
Q 009077 408 ETTI--DKEG--WLHTGDIGYIDDDDELFIVDRLKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVA 482 (544)
Q Consensus 408 ~~~~--~~~~--~~~TgDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 482 (544)
.+.+ +.+| ||+|||+|++++||++++.||++|+||. +|++|+|.+||++|.++|.|.+++|++.+ ....+++
T Consensus 524 ~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~---~~~~~~a 600 (696)
T PLN02387 524 DEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADP---FHSYCVA 600 (696)
T ss_pred hhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEE
Confidence 8887 4445 9999999999999999999999999998 79999999999999999999999999743 2356788
Q ss_pred EEEecCCC--------C---CC----------HHHHHHHH-----HhcccCCCcccEEEEecCCC------CCCCcccch
Q 009077 483 FVVRSNGS--------K---IT----------EDEIKQYI-----SKQVVFYKRINRVFFTDSIP------KAPSGKILR 530 (544)
Q Consensus 483 ~v~~~~~~--------~---~~----------~~~l~~~l-----~~~l~~~~~p~~~~~~~~lP------~t~~GK~~r 530 (544)
+|++.+.. . .+ .+++.+.+ +..|..+.+|+.|.++.+.. .|++.|++|
T Consensus 601 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R 680 (696)
T PLN02387 601 LVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKR 680 (696)
T ss_pred EEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhh
Confidence 88875421 0 01 11222333 33588999999998886533 578889999
Q ss_pred HHHHhHHhh
Q 009077 531 KDLRTKLAA 539 (544)
Q Consensus 531 ~~l~~~~~~ 539 (544)
..+++.|.+
T Consensus 681 ~~i~~~y~~ 689 (696)
T PLN02387 681 EQIRKKFKD 689 (696)
T ss_pred HHHHHHHHH
Confidence 999999975
No 76
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=6.5e-64 Score=518.26 Aligned_cols=495 Identities=25% Similarity=0.401 Sum_probs=418.8
Q ss_pred HHHHHhh-hccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEee
Q 009077 28 HTYCFEN-ISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTT 106 (544)
Q Consensus 28 ~~~l~~~-a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 106 (544)
.+.++++ ++.+||++|+++. +..+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~ 84 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDD--ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVA 84 (508)
T ss_pred HHHHHHHHhcccCCceEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEee
Confidence 4455665 5679999999876 789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc--CcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCE
Q 009077 107 ANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH--GARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (544)
Q Consensus 107 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (544)
+++.++...+.++++.++++++++++...+.+.+..... ...++.++........+.++.... .....+....++++
T Consensus 85 l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 163 (508)
T TIGR02262 85 LNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATE-SEQFKPAATQADDP 163 (508)
T ss_pred ccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcC-CCccCCCCCCCCCc
Confidence 999999999999999999999999988776665544322 223344443333334454443222 22222334567899
Q ss_pred EEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cC
Q 009077 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FD 263 (544)
Q Consensus 185 ~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~ 263 (544)
++++|||||||.||+|.++|+++...+..... ..+++.++|+++..+|++|.+++...++.++..|+++++.+. ++
T Consensus 164 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 240 (508)
T TIGR02262 164 AFWLYSSGSTGMPKGVVHTHSNPYWTAELYAR---NTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPT 240 (508)
T ss_pred EEEEeCCCCCCCCcEEEEechhHHHHHHHHhH---HhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCC
Confidence 99999999999999999999999877654322 234678999999999999999987778888999999888664 68
Q ss_pred HHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccc
Q 009077 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVL 343 (544)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~ 343 (544)
+..+++.++++++|++.++|.++..++...........++|.++++|+++++++++.|++.| ++++++.||+||++.++
T Consensus 241 ~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~ 319 (508)
T TIGR02262 241 PDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIF 319 (508)
T ss_pred HHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCcee
Confidence 99999999999999999999999888765443334467899999999999999999999999 89999999999999765
Q ss_pred cccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceE
Q 009077 344 SMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIG 423 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~ 423 (544)
..+ .......+..|.|++++.++++| +++.+++.|+.|||+++|+.+..||+++++.+...+ .++||+|||++
T Consensus 320 ~~~-----~~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~ 392 (508)
T TIGR02262 320 LSN-----LPGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKY 392 (508)
T ss_pred ecC-----CccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccceE
Confidence 533 11223456789999999999999 678999999999999999999999999998887777 67999999999
Q ss_pred EEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCC---CCHHHHHHH
Q 009077 424 YIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSK---ITEDEIKQY 500 (544)
Q Consensus 424 ~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~ 500 (544)
+++++|.+++.||.+|+|+.+|.++++.+||+.|.++++|.++++++.++....+.+.+++++.++.. ...+++.+.
T Consensus 393 ~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~ 472 (508)
T TIGR02262 393 VRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEH 472 (508)
T ss_pred EEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887777788888888766542 346789999
Q ss_pred HHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 501 ISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 501 l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
++++++.++.|..+..++++|+|++||++|++|+++
T Consensus 473 ~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 473 VKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred HHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 999999999999999999999999999999998764
No 77
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-63 Score=520.97 Aligned_cols=521 Identities=30% Similarity=0.506 Sum_probs=426.1
Q ss_pred cceEEecCCCCCCCC-----CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEE
Q 009077 8 QEFIFRSKLPDIYIP-----NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIM 81 (544)
Q Consensus 8 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~ 81 (544)
++|+|..-+|-.+.- ...++.+.|..+++++|+++|+.+. ++.+||.||.++++++|.+|.+ .|+++|++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~ 78 (560)
T PRK08974 1 MEKVWLNRYPADVPAEINPDRYQSLVDMFEQAVARYADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVA 78 (560)
T ss_pred CCCCchhhCCCCCCCCCCCCCcccHHHHHHHHHHhCCCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 356776665332211 1357999999999999999999976 7899999999999999999984 8999999999
Q ss_pred EEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCC----
Q 009077 82 LLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPE---- 157 (544)
Q Consensus 82 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 157 (544)
++++|+++++++++||+++|++++|++|.++.+.+.++++.++++.+++++.....+.++......+.+.+.....
T Consensus 79 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (560)
T PRK08974 79 LMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLST 158 (560)
T ss_pred EECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccc
Confidence 9999999999999999999999999999999999999999999999999887665555544333322222211000
Q ss_pred -----------------------CCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHh
Q 009077 158 -----------------------NCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQ 214 (544)
Q Consensus 158 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~ 214 (544)
....+.+................++++++++|||||||.||+|.++|.++..++...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~ 238 (560)
T PRK08974 159 AKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQA 238 (560)
T ss_pred cccccccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHH
Confidence 011111111111111111223567899999999999999999999999998766543
Q ss_pred hhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcC
Q 009077 215 VDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG 293 (544)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 293 (544)
...+. ......++.++..+|++|.+++....+.++..|+++++.. ..++..+++.++++++|.+.++|+++..+.+..
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~ 317 (560)
T PRK08974 239 KAAYG-PLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNE 317 (560)
T ss_pred HHhhc-cccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCc
Confidence 32222 1123456778899999999988676777888888866653 467889999999999999999999999998876
Q ss_pred CCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEE
Q 009077 294 DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIV 373 (544)
Q Consensus 294 ~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 373 (544)
......++++|.+++||+++++.+.+.+++.+ ++.+++.||+||++.+++.+... .....+++|.|++++.++++
T Consensus 318 ~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~----~~~~~~~~G~~~~~~~~~i~ 392 (560)
T PRK08974 318 EFQELDFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYD----LDYYSGSIGLPVPSTEIKLV 392 (560)
T ss_pred CcccCCccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCC----CcccCCccccCcCCCEEEEE
Confidence 65556678999999999999999999999988 89999999999999776654221 12335678999999999999
Q ss_pred cCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHH
Q 009077 374 DPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAEL 453 (544)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 453 (544)
|+ ++.+++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||+++++++|.+++.||.+|+|+++|.++++.+|
T Consensus 393 ~~-~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~I 470 (560)
T PRK08974 393 DD-DGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEI 470 (560)
T ss_pred CC-CCCCCCCCCceEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHH
Confidence 95 68899999999999999999999999988887777 78999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHH
Q 009077 454 EAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDL 533 (544)
Q Consensus 454 e~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 533 (544)
|+.|.++++|.+++|++.++...++.++++++..+ ...+.+++++++.+.++.++.|..+.+++++|+|++||++|+.|
T Consensus 471 E~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~-~~~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l 549 (560)
T PRK08974 471 EDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKD-PSLTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRREL 549 (560)
T ss_pred HHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCC-CCCCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHH
Confidence 99999999999999999998888888888776543 44567889999999999999999999999999999999999999
Q ss_pred HhHHhh
Q 009077 534 RTKLAA 539 (544)
Q Consensus 534 ~~~~~~ 539 (544)
++...+
T Consensus 550 ~~~~~~ 555 (560)
T PRK08974 550 RDEARA 555 (560)
T ss_pred HHHHHh
Confidence 987765
No 78
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=2.8e-64 Score=520.90 Aligned_cols=490 Identities=23% Similarity=0.290 Sum_probs=408.9
Q ss_pred CHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEe
Q 009077 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (544)
Q Consensus 26 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (544)
++.+.+.+.++.+|+++|+.+. ++.+||+||.+++.++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v 78 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYI 78 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 4678999999999999999876 78999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEE
Q 009077 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVV 185 (544)
Q Consensus 106 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (544)
|+++.++.+.+.++++..+++.++++........ ....+.++. ..++.... ..........+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~ 144 (502)
T TIGR01734 79 PVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV------GTQIITLSA-------LEQAETSG-GPVSFDHAVKGDDNY 144 (502)
T ss_pred CCCCcChHHHHHHHHHhcCCCEEEeccccccccc------CCceEEchH-------hhhhhhhc-CCccccccCCCCCeE
Confidence 9999999999999999999999999876533221 111222211 11111111 111112235678999
Q ss_pred EEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC---c
Q 009077 186 ALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK---F 262 (544)
Q Consensus 186 ~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~---~ 262 (544)
+++|||||||.||+|.++|.++.....+... .++...+++++...|++|..++ ..++.++..|+++++.+. .
T Consensus 145 ~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~ 219 (502)
T TIGR01734 145 YIIYTSGSTGNPKGVQISHDNLVSFTNWMLA----DFPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKDITN 219 (502)
T ss_pred EEEECCCCCCCCCEEEEecHHHHHHHHHHHH----hCCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCHHHhc
Confidence 9999999999999999999999888776654 3457889999999999999887 678889999999998765 4
Q ss_pred CHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcc
Q 009077 263 DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPV 342 (544)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~ 342 (544)
++..+++.+.+++++.+.++|.++..++.........+++++.++++|++++++..+.+.+.++++++++.||+||++..
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 299 (502)
T TIGR01734 220 NFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVA 299 (502)
T ss_pred CHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEE
Confidence 78899999999999999999999987776544445567899999999999999999999999989999999999998754
Q ss_pred ccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhc---CCCCceec
Q 009077 343 LSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTI---DKEGWLHT 419 (544)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~~~~~~T 419 (544)
.+................+|.|.++++++|+|+ ++.+++.|+.|||+++|+.++.||+++++.+...+ ...+||+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~-~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~T 378 (502)
T TIGR01734 300 VTSVKITQEILDQYPRLPIGFAKPDMNLFIMDE-EGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRT 378 (502)
T ss_pred EEEEEccccccccCCccccccccCCCEEEEECC-CCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEEC
Confidence 332211111122334457899999999999994 58889999999999999999999999988877654 34469999
Q ss_pred CceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeee-CCCCCceEEEEEEecCCCCCC----H
Q 009077 420 GDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMK-DEAAGEVPVAFVVRSNGSKIT----E 494 (544)
Q Consensus 420 gDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~-~~~~~~~~~~~v~~~~~~~~~----~ 494 (544)
||+|+++++ ++++.||.+|+|+.+|++|+|.+||+.+.++|.|.+++++++. .....+.+++++++.+..... .
T Consensus 379 GDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 457 (502)
T TIGR01734 379 GDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLT 457 (502)
T ss_pred CCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhH
Confidence 999999876 9999999999999999999999999999999999999999875 445567888888876543222 2
Q ss_pred HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 495 DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 495 ~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
+++++.+++.++.+++|+.+++++++|+|++||++|++|++++.
T Consensus 458 ~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 458 KAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred HHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 67899999999999999999999999999999999999999875
No 79
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=6.3e-65 Score=582.61 Aligned_cols=503 Identities=20% Similarity=0.317 Sum_probs=408.5
Q ss_pred CCHHHHHHhhhccCCCccEEEeC-------CCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 009077 25 LPLHTYCFENISQFADRPCIING-------PTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~-------~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (544)
.++.+.|.++++++|+++|+++. ..++++||+||.++++++|++|.+.|+++|++|+|+++|++++++++|||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 58999999999999999999863 23578999999999999999999999999999999999999999999999
Q ss_pred HhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch---hHHHHHHHhhc-----CcEEEEeCCCCC---CCccH--HH
Q 009077 98 SYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY---NDKVRDLSEHH-----GARIVTIDPPPE---NCLHF--SE 164 (544)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~~-----~~~~v~~~~~~~---~~~~~--~~ 164 (544)
+++|++++|++|.++.+++.++++.++++++++.... ...+....... ....+.+..... ..... .+
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEGGETD 395 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccccccccccccc
Confidence 9999999999999999999999999999999987642 11221111100 111111211100 00000 01
Q ss_pred HHhhcc--CCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhh
Q 009077 165 LITQAD--ENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242 (544)
Q Consensus 165 ~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 242 (544)
.+.... ..........++++++++|||||||.||+|.++|+++...+.+... .+++.++|+++...|++|..++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~d~~~ 471 (1389)
T TIGR03443 396 VLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAK----RFGLSENDKFTMLSGIAHDPIQ 471 (1389)
T ss_pred ccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHH----hcCCCCCCEEEEecCceecchH
Confidence 100000 0011122356799999999999999999999999999888776655 4457899999999999998776
Q ss_pred HHHHHHHHHhCcEEEEccC---cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHH
Q 009077 243 NSVLLCALRVGAAILIMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELED 319 (544)
Q Consensus 243 ~~~~~~~l~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~ 319 (544)
..++.++..|+++++.+. .++..+++.++++++|++.++|+++..|.... ...++++|.+++||++++++..+
T Consensus 472 -~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~ 547 (1389)
T TIGR03443 472 -RDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDCL 547 (1389)
T ss_pred -HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHHH
Confidence 678899999999999764 36889999999999999999999999887543 23468999999999999999999
Q ss_pred HHHHHCCCCceeccccccccCccccccccccCCC------CccCCCeeeeccCCceEEEEcCC-CCCCCCCCCceeEEEe
Q 009077 320 AVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEP------FEIKSGACGTVVRNAEMKIVDPD-TGISLPRNQAGEICIR 392 (544)
Q Consensus 320 ~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~------~~~~~~~~g~p~~~~~~~i~d~~-~~~~~~~g~~Gel~v~ 392 (544)
.+.+.++++++++.||+||++..++......... ......++|+|+++++++|+|++ .+.+++.|+.|||+|+
T Consensus 548 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~ 627 (1389)
T TIGR03443 548 RLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVR 627 (1389)
T ss_pred HHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEec
Confidence 9998888999999999999986655432111110 01134678999999999999964 3578999999999999
Q ss_pred cCcccccccCChhhhhhhcC----------------------------CCCceecCceEEEcCCCcEEEEccccceEEeC
Q 009077 393 GAQIMKGYLNDREATETTID----------------------------KEGWLHTGDIGYIDDDDELFIVDRLKELIKFK 444 (544)
Q Consensus 393 ~~~~~~gy~~~~~~~~~~~~----------------------------~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~ 444 (544)
|+++++||+++++.+.+.|. .++||+|||+|++++||++++.||.||+||++
T Consensus 628 G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~ 707 (1389)
T TIGR03443 628 AGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIR 707 (1389)
T ss_pred ccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeC
Confidence 99999999999999887762 35899999999999999999999999999999
Q ss_pred ceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC-CC-------------------------CHHHHH
Q 009077 445 GFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS-KI-------------------------TEDEIK 498 (544)
Q Consensus 445 G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~-------------------------~~~~l~ 498 (544)
|++|+|.+||.+|.++|.|.+++|++..+...++.+++++++..+. .. ..++++
T Consensus 708 G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 787 (1389)
T TIGR03443 708 GFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIR 787 (1389)
T ss_pred cEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHHH
Confidence 9999999999999999999999999888877788999999876221 10 145789
Q ss_pred HHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHh
Q 009077 499 QYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 499 ~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
++++++||.|++|..+++++.||+|++||++|++|++
T Consensus 788 ~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 788 EYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred HHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 9999999999999999999999999999999999964
No 80
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1e-64 Score=524.80 Aligned_cols=486 Identities=20% Similarity=0.308 Sum_probs=380.7
Q ss_pred HHHHHHhhhccCCCccEEEeCCCC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 27 LHTYCFENISQFADRPCIINGPTG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 27 ~~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
+.+.|.++++++|+++|+++.+.+ +++||+||.++++++|+.|.++ ++|++|+++++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 788999999999999999987433 7899999999999999999987 899999999999999999999999999986
Q ss_pred eecCCCC--------CHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCc
Q 009077 105 TTANPFY--------TPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPA 176 (544)
Q Consensus 105 v~l~~~~--------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (544)
+ ++|.. ..+.+.+++..++++++|+++.....+...... +.+.. +......... .+.
T Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~~--~~~ 146 (525)
T PRK05851 82 S-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-----VTVHD-------LATAAHTNRS--ASL 146 (525)
T ss_pred c-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-----ccccc-------cccccccccc--ccC
Confidence 5 44322 224455678899999999987765544332110 11110 0000000000 011
Q ss_pred cCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCC-CCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH-KEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 177 ~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
....++++++++|||||||.||+|.++|.++...+..... .+++. ++|++++.+|++|.+|+ ..++.++..|++
T Consensus 147 ~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~----~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~ 221 (525)
T PRK05851 147 TPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNA----RVGLDAATDVGCSWLPLYHDMGL-AFLLTAALAGAP 221 (525)
T ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHH----HhCCCCCCCeEEEcCCCccCccH-HHHHHHHHcCCe
Confidence 2246789999999999999999999999999888776654 34467 89999999999999998 467889999999
Q ss_pred EEEccC--c--CHHHHHHHHHhccceeccCcHHHHHHHHhcCC-CCCCCCCCceEEEEecccCCHHHHHHHHHH---C--
Q 009077 256 ILIMQK--F--DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD-VDKYDMSSIRTVMSGAAPMGKELEDAVRAK---L-- 325 (544)
Q Consensus 256 ~v~~~~--~--~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~-~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~---~-- 325 (544)
+++.+. + ++..+++.+.++++|++...|.++..+.+... .....++++|.++++|+++++++.+.|.+. +
T Consensus 222 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~ 301 (525)
T PRK05851 222 LWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGF 301 (525)
T ss_pred EEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCC
Confidence 998763 3 57789999999999988554444444433322 223457899999999999999999998874 3
Q ss_pred CCCceeccccccccCcccccccccc---------CC-CCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCc
Q 009077 326 PHAKLGQGYGMTEAGPVLSMCLAFA---------KE-PFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQ 395 (544)
Q Consensus 326 ~~~~v~~~yG~tE~~~~~~~~~~~~---------~~-~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 395 (544)
+...+++.||+||++.+++...... .. .......++|+|+++++++|+|++...+++.|+.|||+++|++
T Consensus 302 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~ 381 (525)
T PRK05851 302 DAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGAS 381 (525)
T ss_pred ChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCc
Confidence 2246999999999986544321100 00 0112346789999999999999765567899999999999999
Q ss_pred ccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCC
Q 009077 396 IMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEA 475 (544)
Q Consensus 396 ~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~ 475 (544)
++.||+++++. +.++||+|||+++++ +|+++++||.||+||++|++|+|.+||++|.++|.|.+++|++++++.
T Consensus 382 ~~~GY~~~~~~-----~~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~ 455 (525)
T PRK05851 382 MMSGYLGQAPI-----DPDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGE 455 (525)
T ss_pred hhhccccCCcc-----CCCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecC
Confidence 99999998753 257899999999986 799999999999999999999999999999999999999999999887
Q ss_pred CCceEEEEEEecCCCCCCHHHHHHHHHhcccCC--CcccEEEEec--CCCCCCCcccchHHHHhHHhhcc
Q 009077 476 AGEVPVAFVVRSNGSKITEDEIKQYISKQVVFY--KRINRVFFTD--SIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 476 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~~~~~~--~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
.++.+.++++... ...+.+++.++++++++.+ ++|..+++++ +||+|++||++|++|++.+.+++
T Consensus 456 ~~~~~~~~v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~~~ 524 (525)
T PRK05851 456 GSARPGLVIAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEAAD 524 (525)
T ss_pred CCCceeEEEEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHHHHHHHhcC
Confidence 7777766665431 2245567777777777776 8999999998 89999999999999999998764
No 81
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=3.3e-63 Score=516.54 Aligned_cols=500 Identities=30% Similarity=0.483 Sum_probs=414.6
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.|+.+.|.++++++|+++|+++. ++.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 21 ~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 21 GTLPDLLSKAAADYGPRPALEFR--DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCHHHHHHHHHHHcCCCceEEEC--CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 48999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecch--hHHHHHHHhh-cCcEEEEeCCCC--------------CCCccHHHHHh
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVY--NDKVRDLSEH-HGARIVTIDPPP--------------ENCLHFSELIT 167 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~-~~~~~v~~~~~~--------------~~~~~~~~~~~ 167 (544)
+|++|.++...+.++++.++++.+++++.. .....+.... ....++.++... .....+.+++.
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 999999999999999999999999998642 1112111111 112233332210 11233444432
Q ss_pred hccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCC--CCccCCCCeEEEEecchhhHHhhHHH
Q 009077 168 QADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN--PNLYLHKEDVILCVLPLFHIYSLNSV 245 (544)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~g~~~~ 245 (544)
.. ..........++++++++|||||||.||+|.++|.++....... ..+. ........+++++..|++|.+++...
T Consensus 179 ~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~ 256 (541)
T TIGR03205 179 GA-AAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIYALTVI 256 (541)
T ss_pred cC-CCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHHHHHHH
Confidence 21 11112224567899999999999999999999999987654422 1111 01122345789999999999998777
Q ss_pred HHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHC
Q 009077 246 LLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKL 325 (544)
Q Consensus 246 ~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~ 325 (544)
++.++..|+++++...+++..+++.+.++++|++.++|+++..+.+........+++++.+++||+++++++.+++.+.+
T Consensus 257 ~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~ 336 (541)
T TIGR03205 257 LLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKT 336 (541)
T ss_pred HHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHHh
Confidence 88999999999998888999999999999999999999999999876544444577899999999999999999999888
Q ss_pred CCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEc-CCCCCCCCCCCceeEEEecCcccccccCCh
Q 009077 326 PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVD-PDTGISLPRNQAGEICIRGAQIMKGYLNDR 404 (544)
Q Consensus 326 ~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d-~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 404 (544)
+.++++.||+||++.+++.+.. ......+++|.|++++.+++++ .+.+++++.|+.|||+++|+++..||++++
T Consensus 337 -~~~~~~~YG~TE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 411 (541)
T TIGR03205 337 -GLKLKSGWGMTETCSPGTGHPP----EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNRP 411 (541)
T ss_pred -CCCeecccccccCCcccccCCC----CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCCh
Confidence 7999999999999876554321 1123356889999999998865 256788999999999999999999999999
Q ss_pred hhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEE
Q 009077 405 EATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFV 484 (544)
Q Consensus 405 ~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 484 (544)
..+...+ .++||+|||+++++++|++++.||.+|+|+.+|+++++.+||+.+.+++.|.+++|++++++..++.+++++
T Consensus 412 ~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 490 (541)
T TIGR03205 412 EESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFV 490 (541)
T ss_pred hhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEE
Confidence 8888777 578999999999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EecCCC-CCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHH
Q 009077 485 VRSNGS-KITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLR 534 (544)
Q Consensus 485 ~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 534 (544)
++.++. ..+.+++.++++++|+.+++|+.++++++||+|++||++|..|+
T Consensus 491 ~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 491 KLRPGAKPFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred EECCCCCcCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 887653 35788999999999999999999999999999999999999874
No 82
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-64 Score=518.96 Aligned_cols=489 Identities=26% Similarity=0.396 Sum_probs=395.4
Q ss_pred HhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCC
Q 009077 32 FENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY 111 (544)
Q Consensus 32 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 111 (544)
-.+++++|+++|+++.+.++.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++|+++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~ 83 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHL 83 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCC
Confidence 35677899999998765578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCC
Q 009077 112 TPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSS 191 (544)
Q Consensus 112 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 191 (544)
+.+.+.+++..++++.+++++.............. ..+.+.........+++..... . + .....++.++++|||
T Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~a~i~~TS 157 (501)
T PRK13390 84 TAPEADYIVGDSGARVLVASAALDGLAAKVGADLP-LRLSFGGEIDGFGSFEAALAGA-G---P-RLTEQPCGAVMLYSS 157 (501)
T ss_pred CHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccc-eEEEecCcccccccHHHHhccc-C---C-CCCCCcccEEEEeCC
Confidence 99999999999999999998765443332221111 1122222222222343332211 0 0 111223579999999
Q ss_pred CCCCCCchhhh--chHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHH
Q 009077 192 GTTGLPKGVML--THKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLME 269 (544)
Q Consensus 192 GtTG~pk~v~~--t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~ 269 (544)
||||.||+|.+ +|.++..............+.+..+++++..+|++|..++... ...+..|+++++.+.+++..+++
T Consensus 158 GTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 236 (501)
T PRK13390 158 GTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWC-SMVHALGGTVVLAKRFDAQATLG 236 (501)
T ss_pred CCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHH-HHHHhcCceEEEcCCcCHHHHHH
Confidence 99999999995 4444433211110000113457889999999999999887443 34567899999988899999999
Q ss_pred HHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccc
Q 009077 270 LVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCL 347 (544)
Q Consensus 270 ~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~ 347 (544)
.++++++|++.++|+++..+.+.... ....++++|.++.+|+++++++.+.+++.+ +..+++.||+||++.++...
T Consensus 237 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~- 314 (501)
T PRK13390 237 HVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFID- 314 (501)
T ss_pred HHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEec-
Confidence 99999999999999999998875432 234567899999999999999999999988 78999999999998644321
Q ss_pred cccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCC--CCceecCceEEE
Q 009077 348 AFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDK--EGWLHTGDIGYI 425 (544)
Q Consensus 348 ~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--~~~~~TgDl~~~ 425 (544)
........+++|+|+++ .++++| +++.+++.|+.|||+++|+++..||+++++.+...+.+ ++|++|||++++
T Consensus 315 ---~~~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~ 389 (501)
T PRK13390 315 ---SPDWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSV 389 (501)
T ss_pred ---chhhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEE
Confidence 11122345688999999 799999 57889999999999999999999999999988777643 689999999999
Q ss_pred cCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCC---HHHHHHHHH
Q 009077 426 DDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKIT---EDEIKQYIS 502 (544)
Q Consensus 426 ~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~ 502 (544)
+++|++++.||.+++|+.+|.+|+|.+||+.|.++|.|.+++|++++++..++.+++++++.++.... .+++.++++
T Consensus 390 ~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~ 469 (501)
T PRK13390 390 DEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTR 469 (501)
T ss_pred CCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999998877654332 468999999
Q ss_pred hcccCCCcccEEEEecCCCCCCCcccchHHHH
Q 009077 503 KQVVFYKRINRVFFTDSIPKAPSGKILRKDLR 534 (544)
Q Consensus 503 ~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 534 (544)
.+|+.+++|..++++++||+|++||++|++|+
T Consensus 470 ~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 470 SRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred HhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 99999999999999999999999999999874
No 83
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.9e-64 Score=530.29 Aligned_cols=494 Identities=19% Similarity=0.255 Sum_probs=395.6
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCC--C-CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhh
Q 009077 24 HLPLHTYCFENISQFADRPCIINGP--T-GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYI 100 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~--~-~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 100 (544)
..|+.+.|.++++++|+++|+++.+ + .+.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 4689999999999999999998742 1 268999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCC-----HHHHHHHHHhcCceEEEEecch--hHHHHHHHhhcCcEEEEeCCCCC--CCccHHHHHhhccC
Q 009077 101 GATSTTANPFYT-----PPEIAKQAIASKAKIIITQAVY--NDKVRDLSEHHGARIVTIDPPPE--NCLHFSELITQADE 171 (544)
Q Consensus 101 G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~ 171 (544)
|++++|++|.++ .+++.++++.++++++|+++.. ...+... ......++..+.... ....+++++.....
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 196 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAV-VPADVEVVAVRGAVPGRAATPFAALLATPPT 196 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhh-ccCCceEEEecCCCCCcccccHHHHhccccc
Confidence 999999999998 7899999999999999997542 2222211 111334444433211 13556666433211
Q ss_pred CC--CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCC--CCeEEEEecchhhHHhhHHHHH
Q 009077 172 NE--IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH--KEDVILCVLPLFHIYSLNSVLL 247 (544)
Q Consensus 172 ~~--~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~g~~~~~~ 247 (544)
.. .......++++++++|||||||.||+|.+||+++..........+ ... .++++++.+|++|.+|++..++
T Consensus 197 ~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~----~~~~~~~~~~l~~lPl~h~~g~~~~~~ 272 (614)
T PRK08180 197 AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF----PFLAEEPPVLVDWLPWNHTFGGNHNLG 272 (614)
T ss_pred cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc----cccCCCCcEEEEecchHHHhhHHHHHH
Confidence 11 111235679999999999999999999999999988776654422 232 5689999999999999878888
Q ss_pred HHHHhCcEEEEccC-cC---HHHHHHHHHhccceeccCcHHHHHHHHhcCCCC----CCCCCCceEEEEecccCCHHHHH
Q 009077 248 CALRVGAAILIMQK-FD---IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD----KYDMSSIRTVMSGAAPMGKELED 319 (544)
Q Consensus 248 ~~l~~g~~~v~~~~-~~---~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~----~~~l~~l~~~~~~G~~l~~~~~~ 319 (544)
.++..|+++++.+. ++ +..+++.++++++|++.++|.++..|++..... ...++++|.+++||+++++++.+
T Consensus 273 ~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~ 352 (614)
T PRK08180 273 IVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWD 352 (614)
T ss_pred HHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHH
Confidence 99999999998653 33 346788899999999999999999988753321 23468999999999999999999
Q ss_pred HHHHH----CC-CCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecC
Q 009077 320 AVRAK----LP-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (544)
Q Consensus 320 ~~~~~----~~-~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 394 (544)
.+++. ++ ++.+++.||+||++.+++... ......+++|+|+++++++++|. +..|||+++|+
T Consensus 353 ~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~-----~~~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~ 419 (614)
T PRK08180 353 RLDRVAEATCGERIRMMTGLGMTETAPSATFTT-----GPLSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGP 419 (614)
T ss_pred HHHHHHHhhcCCCceeeeeecccccCCceEecc-----cccCCCCcccCccCCcEEEEecC--------CCCcEEEEecC
Confidence 99875 32 478999999999987655431 11235678999999999999984 34599999999
Q ss_pred cccccccCChhhhhhhcCCCCceecCceEEE----cCCCcEEEEccccceEEe-CceeeC--cHHHHHHHHcCCCcceeE
Q 009077 395 QIMKGYLNDREATETTIDKEGWLHTGDIGYI----DDDDELFIVDRLKELIKF-KGFQVA--PAELEAMLIAHPNISDAA 467 (544)
Q Consensus 395 ~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~----~~~g~l~~~GR~~d~i~~-~G~~v~--~~~ie~~l~~~~~v~~~~ 467 (544)
+++.||+++++.+...++.+|||+|||+|++ +++|++++.||++|+|+. +|++++ +.++|..+.++|.|.+++
T Consensus 420 ~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~ 499 (614)
T PRK08180 420 NVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVV 499 (614)
T ss_pred ccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEE
Confidence 9999999999999888878999999999999 468999999999998886 898777 778888889999999999
Q ss_pred EEeeeCCCCCceEEEEEEecCCC---------------CCCHHHHHHHHHhcccCCC--------cccEEEEecCCCCC-
Q 009077 468 VVPMKDEAAGEVPVAFVVRSNGS---------------KITEDEIKQYISKQVVFYK--------RINRVFFTDSIPKA- 523 (544)
Q Consensus 468 v~~~~~~~~~~~~~~~v~~~~~~---------------~~~~~~l~~~l~~~l~~~~--------~p~~~~~~~~lP~t- 523 (544)
|++.+++ .+.++|++.++. ..+.++++++++..+..++ +|.++.+++++|++
T Consensus 500 V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~ 575 (614)
T PRK08180 500 ITGHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLD 575 (614)
T ss_pred EEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCc
Confidence 9987764 466888876441 1344678888888887777 89999999999986
Q ss_pred -----CCcccchHHHHhHHhh
Q 009077 524 -----PSGKILRKDLRTKLAA 539 (544)
Q Consensus 524 -----~~GK~~r~~l~~~~~~ 539 (544)
++||++|.++.+.|++
T Consensus 576 ~gk~t~~~~~~R~~~~~~y~~ 596 (614)
T PRK08180 576 AGEITDKGYINQRAVLARRAA 596 (614)
T ss_pred cCccCccccccHHHHHHHhHH
Confidence 4668889999888865
No 84
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-63 Score=517.10 Aligned_cols=480 Identities=23% Similarity=0.356 Sum_probs=404.3
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
..++.+.+.++++++|+++|+.+. ++.+||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v 111 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIIDD--DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGAD 111 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeE
Confidence 478999999999999999999976 678999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCC
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDD 183 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (544)
++|+++.++.+.+.++++.++++.+++++.....+.... ..++.++.... .. . . . ...+...++
T Consensus 112 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~~------~~-~-~-~---~~~p~~~~~ 175 (516)
T PRK13383 112 VVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD----DAVAVIDPATA------GA-E-E-S---GGRPAVAAP 175 (516)
T ss_pred EEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh----cceEEeccchh------hh-h-c-C---CCCCCCCCC
Confidence 999999999999999999999999999887665544321 12223321100 00 0 0 0 011122456
Q ss_pred EEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcC
Q 009077 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (544)
Q Consensus 184 ~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~ 263 (544)
.++++|||||||.||+|.++|..... ........ ..+++.++++++..+|++|.+|+ ..++.++..|++++....++
T Consensus 176 ~~~il~TSGTTG~PK~v~~s~~~~~~-~~~~~~~~-~~~~~~~~d~~~~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~ 252 (516)
T PRK13383 176 GRIVLLTSGTTGKPKGVPRAPQLRSA-VGVWVTIL-DRTRLRTGSRISVAMPMFHGLGL-GMLMLTIALGGTVLTHRHFD 252 (516)
T ss_pred CcEEEECCCCCCCCCeeeecchhhhh-hhhHHhHH-hhhccCCCCeEEEecCCcchhhH-HHHHHHHhcCCEEEECCCCC
Confidence 67899999999999999999874321 11111111 13457889999999999999998 55777899999999988899
Q ss_pred HHHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCc
Q 009077 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGP 341 (544)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~ 341 (544)
+..+++.++++++|.+.++|.++..+.+.... ....++++|.++++|+++++++++.+.+.| +..+++.||+||++.
T Consensus 253 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~ 331 (516)
T PRK13383 253 AEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGI 331 (516)
T ss_pred HHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhccccccccc
Confidence 99999999999999999999999999876432 123467899999999999999999999999 789999999999986
Q ss_pred cccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCc
Q 009077 342 VLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGD 421 (544)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD 421 (544)
.+..+. .......+++|.|+++++++|+| +++.+++.|+.|||+++|+.++.+|++.+.. .+ .+|||+|||
T Consensus 332 ~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGD 402 (516)
T PRK13383 332 GALATP----ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGD 402 (516)
T ss_pred ceeccc----cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchh---he-ecCceecce
Confidence 554321 11223457899999999999999 4678999999999999999999999987532 22 579999999
Q ss_pred eEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHH
Q 009077 422 IGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYI 501 (544)
Q Consensus 422 l~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l 501 (544)
+++++++|++++.||.+|+|+.+|.++++.+||+.|.++|+|.+++++++++...++.+.++|++.++...+.+++++++
T Consensus 403 l~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~ 482 (516)
T PRK13383 403 MGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYL 482 (516)
T ss_pred eEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988888999999998877777788999999
Q ss_pred HhcccCCCcccEEEEecCCCCCCCcccchHHHH
Q 009077 502 SKQVVFYKRINRVFFTDSIPKAPSGKILRKDLR 534 (544)
Q Consensus 502 ~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 534 (544)
+++++.+++|..+.++++||+|++||++|++|+
T Consensus 483 ~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 483 KDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred HHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 999999999999999999999999999999874
No 85
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.1e-64 Score=576.69 Aligned_cols=488 Identities=21% Similarity=0.297 Sum_probs=413.4
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
.++.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++++++++++++||+++|+++
T Consensus 458 ~~l~~~~~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~ 535 (1296)
T PRK10252 458 TTLSALVAQQAAKTPDAPALADA--RYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAW 535 (1296)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCE
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (544)
+|++|.++.+++.++++.+++++++++......+.+. ........+. .... ....+.....++++
T Consensus 536 vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~----------~~~~--~~~~~~~~~~~~~~ 600 (1296)
T PRK10252 536 LPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV---PDLTSLCYNA----------PLAP--QGAAPLQLSQPHHT 600 (1296)
T ss_pred EecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC---CCceeeeccc----------cccc--ccCCCCCCCCCCCe
Confidence 9999999999999999999999999988765443321 1111111110 0000 01111122367899
Q ss_pred EEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC---
Q 009077 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK--- 261 (544)
Q Consensus 185 ~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~--- 261 (544)
++++|||||||.||+|.++|+++.+.+.+... .+++.++|+++...|+++..++ ..++.++..|+++++.+.
T Consensus 601 a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~~~~~~ 675 (1296)
T PRK10252 601 AYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN----HYPLTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLVMAEPEAH 675 (1296)
T ss_pred EEEEECCCCCCCCCEEEeccHHHHHHHHHHHH----hcCCCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEEECChhcc
Confidence 99999999999999999999999988877665 4568899999999999998887 677889999999999763
Q ss_pred cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCC--CCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccccccc
Q 009077 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK--YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (544)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~--~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~ 339 (544)
.++..+++.++++++|++.++|+++..+++...... ..++++|.+++|||++++++.+.+.+.+ ++++++.||+||+
T Consensus 676 ~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~ 754 (1296)
T PRK10252 676 RDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEA 754 (1296)
T ss_pred CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchh
Confidence 589999999999999999999999999887643332 2467899999999999999999999987 8999999999999
Q ss_pred CccccccccccCC--CCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCC----
Q 009077 340 GPVLSMCLAFAKE--PFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDK---- 413 (544)
Q Consensus 340 ~~~~~~~~~~~~~--~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---- 413 (544)
+..++........ .......++|.|++++.+.|+| +.+++++.|..|||+++|+++++||+++++.+...|..
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~ 833 (1296)
T PRK10252 755 AVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFA 833 (1296)
T ss_pred hheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCC
Confidence 8665543221111 0123346799999999999999 57899999999999999999999999999998887743
Q ss_pred --CCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeee------CCCCCceEEEEEE
Q 009077 414 --EGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMK------DEAAGEVPVAFVV 485 (544)
Q Consensus 414 --~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~------~~~~~~~~~~~v~ 485 (544)
++||+|||+|+++++|.++++||.|++||++|.+|++.+||+.|.++|+|.++.|+... .......++++++
T Consensus 834 ~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~ 913 (1296)
T PRK10252 834 PGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLV 913 (1296)
T ss_pred CCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEE
Confidence 45999999999999999999999999999999999999999999999999999887653 1122247899998
Q ss_pred ecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 486 RSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 486 ~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
..++...+.++++++++.+||.|++|..++.+++||+|++||++|++|.+.
T Consensus 914 ~~~~~~~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 914 SQSGLPLDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred cCCCCCCCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 876666788999999999999999999999999999999999999999763
No 86
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=7.6e-65 Score=626.90 Aligned_cols=497 Identities=23% Similarity=0.320 Sum_probs=424.2
Q ss_pred CCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 19 IYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 19 ~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
.+.+...++.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|.++|+++|++|+++++++++++++++||+
T Consensus 1997 ~~~~~~~~~~~~~~~~a~~~p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil 2074 (5163)
T PRK12316 1997 EAYPRGPGVHQRIAEQAARAPEAIAVVFG--DQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVL 2074 (5163)
T ss_pred CCCCCCCCHHHHHHHHHHhCCCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 34555579999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccC
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (544)
++|+++||++|.++.+++.++++.+++++++++......+... .....+.++.. ... .. .....+...
T Consensus 2075 ~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~~-------~~~-~~-~~~~~~~~~ 2142 (5163)
T PRK12316 2075 KAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP---AGVARLPLDRD-------AEW-AD-YPDTAPAVQ 2142 (5163)
T ss_pred hhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc---cccceEeccch-------hhh-hc-cCccCCCCC
Confidence 9999999999999999999999999999999987754433211 11222222211 001 11 111122334
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..++++++++|||||||.||+|.++|+++.+.+..... .++++++++++...|++|..++ ..++.++..|+++++
T Consensus 2143 ~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~~~~ 2217 (5163)
T PRK12316 2143 LAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGE----RYELSPADCELQFMSFSFDGAH-EQWFHPLLNGARVLI 2217 (5163)
T ss_pred CCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHH----hcCCCCcceEEEecCchHHHHH-HHHHHHHhCCCEEEe
Confidence 67899999999999999999999999999988877665 4458899999999999998776 778999999999988
Q ss_pred ccC--cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccc
Q 009077 259 MQK--FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (544)
Q Consensus 259 ~~~--~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~ 336 (544)
.+. +++..+++.++++++|++.++|+++..+.+...... ...++|.+++|||++++++.+.|.+.+++.++++.||+
T Consensus 2218 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 2296 (5163)
T PRK12316 2218 RDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGP 2296 (5163)
T ss_pred CCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccc
Confidence 764 589999999999999999999999999987654332 23489999999999999999999998888999999999
Q ss_pred cccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC----
Q 009077 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID---- 412 (544)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~---- 412 (544)
||++..++...............++|+|+++++++|+| +++++++.|..|||+|+|+++++||+++++.+...|.
T Consensus 2297 TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~ 2375 (5163)
T PRK12316 2297 TEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPF 2375 (5163)
T ss_pred hhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCC
Confidence 99986554332111111112236799999999999999 4688999999999999999999999999999988873
Q ss_pred ---CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCC
Q 009077 413 ---KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNG 489 (544)
Q Consensus 413 ---~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 489 (544)
.++||+|||+|++++||.++++||+||+||++|++|++.+||..|.++|+|.+++|++.++. .++.+++++++.++
T Consensus 2376 ~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~~ 2454 (5163)
T PRK12316 2376 SASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLVAYVVPDDA 2454 (5163)
T ss_pred CCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEEEEEEecCC
Confidence 34699999999999999999999999999999999999999999999999999999988765 67899999998877
Q ss_pred CCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHH
Q 009077 490 SKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKL 537 (544)
Q Consensus 490 ~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 537 (544)
...+.++++++++..||.|++|..++++++||+|++||++|++|.+..
T Consensus 2455 ~~~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2455 AEDLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred CccCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 778889999999999999999999999999999999999999997653
No 87
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.7e-64 Score=614.73 Aligned_cols=498 Identities=23% Similarity=0.326 Sum_probs=420.9
Q ss_pred CCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 19 IYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 19 ~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
...+...++.++|.++++++|+++|+++. ++.+||+||.++++++|+.|.++|+++|++|++++++++++++++|||+
T Consensus 1568 ~~~~~~~~~~~~~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavl 1645 (3956)
T PRK12467 1568 TGYPLARLVHQLIEDQAAATPEAVALVFG--EQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAIL 1645 (3956)
T ss_pred cCCCccccHHHHHHHHHHhCCCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhh
Confidence 34455578999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccC
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (544)
++|++++|++|.++.+++.++++.+++++++++......+.. ......+.++... +.+ .......+...
T Consensus 1646 kaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~ 1714 (3956)
T PRK12467 1646 KAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPL---PDGLRSLVLDQED-------DWL-EGYSDSNPAVN 1714 (3956)
T ss_pred ccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCcc---ccCCcEEEecccc-------chh-ccCCCCCCCCC
Confidence 999999999999999999999999999999998765443311 1123344443211 010 11111222334
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..++++++++|||||||.||+|.++|+++.+.+.+... .++++++++++...|++|..++ ..++.++..|+++++
T Consensus 1715 ~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi 1789 (3956)
T PRK12467 1715 LAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQE----AYQLSAADVVLQFTSFAFDVSV-WELFWPLINGARLVI 1789 (3956)
T ss_pred CCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHH----hcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEE
Confidence 56899999999999999999999999999888877655 4458899999999999999887 678889999999999
Q ss_pred ccC---cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 259 MQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 259 ~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
.+. .++..+++.++++++|++.++|+++..|.+... ....++++|.+++|||++++++.+.+.+.+++++++|.||
T Consensus 1790 ~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 1868 (3956)
T PRK12467 1790 APPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYG 1868 (3956)
T ss_pred cChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCcc
Confidence 764 578999999999999999999999999987532 2334689999999999999999999999888889999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC---
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID--- 412 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~--- 412 (544)
+||++..++...............++|+|++++.+.|+| +.+++++.|..|||+++|+++++||+++++.+...|.
T Consensus 1869 ~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p 1947 (3956)
T PRK12467 1869 PTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADP 1947 (3956)
T ss_pred CCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCC
Confidence 999986655432111112222356899999999999999 5788999999999999999999999999999988773
Q ss_pred ----CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecC
Q 009077 413 ----KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSN 488 (544)
Q Consensus 413 ----~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 488 (544)
..+||+|||++++++||.++++||+||+||++|++|++.+||+.|.++|+|.+++|++.+ ...++.++++++...
T Consensus 1948 ~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lva~vv~~~ 2026 (3956)
T PRK12467 1948 FGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIAQD-GANGKQLVAYVVPTD 2026 (3956)
T ss_pred CCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEEec-CCCCcEEEEEEEecC
Confidence 346999999999999999999999999999999999999999999999999999999876 455678999998765
Q ss_pred CCCC--------CHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHH
Q 009077 489 GSKI--------TEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKL 537 (544)
Q Consensus 489 ~~~~--------~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 537 (544)
+... ..++++++++..||.|++|..++.+++||+|++||++|++|.+..
T Consensus 2027 ~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKidr~~L~~~~ 2083 (3956)
T PRK12467 2027 PGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKLDRKALPAPD 2083 (3956)
T ss_pred cccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCcchhhCCCCc
Confidence 4322 346899999999999999999999999999999999999997643
No 88
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.1e-64 Score=623.05 Aligned_cols=491 Identities=23% Similarity=0.345 Sum_probs=423.3
Q ss_pred CCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 19 IYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 19 ~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
...+...++.++|.++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+
T Consensus 505 ~~~~~~~~~~~~~~~~a~~~p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~ 582 (5163)
T PRK12316 505 AEYPLQRGVHRLFEEQVERTPEAPALAFG--EETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAIL 582 (5163)
T ss_pred ccCCCCCCHHHHHHHHHHHCCCCeEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 33444578999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccC
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (544)
++|+++||++|.++.+++.++++.+++++++++......+.. ......+.++.... . ........+...
T Consensus 583 ~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~ 651 (5163)
T PRK12316 583 KAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL---AAGVQVLDLDRPAA-------W-LEGYSEENPGTE 651 (5163)
T ss_pred HcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc---ccCceEEEecCcch-------h-hccCCCCCCCCC
Confidence 999999999999999999999999999999998765443211 11233344332110 0 011111222334
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..++++++++|||||||.||+|.++|+++.+.+.+... .+++.++++++...|++|..++ ..++.++..|+++++
T Consensus 652 ~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~fd~~~-~~~~~~L~~G~~l~i 726 (5163)
T PRK12316 652 LNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQ----AYGLGVGDTVLQKTPFSFDVSV-WEFFWPLMSGARLVV 726 (5163)
T ss_pred CCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHH----hcCCCCCCEEEeeCCeehHHHH-HHHHHHHhCCCEEEE
Confidence 67899999999999999999999999999988887765 4568899999999999999998 678899999999999
Q ss_pred cc---CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 259 MQ---KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 259 ~~---~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
.+ ..++..+++.++++++|++.++|+++..|++.... ..++++|.+++|||++++++.+.+.+.+++++++|.||
T Consensus 727 ~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~--~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 804 (5163)
T PRK12316 727 AAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDV--ASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYG 804 (5163)
T ss_pred CCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcccc--ccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcC
Confidence 75 36899999999999999999999999999875432 34689999999999999999999988888899999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC---
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID--- 412 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~--- 412 (544)
+||++..++.... ........++|+|+++++++|+| +++++++.|+.|||+|+|+++++||+++++.+...|.
T Consensus 805 ~TE~~~~~~~~~~---~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~ 880 (5163)
T PRK12316 805 PTEAAIDVTHWTC---VEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSP 880 (5163)
T ss_pred cChheeeeeEEec---ccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCC
Confidence 9999855443221 12233456899999999999999 4688999999999999999999999999999988773
Q ss_pred ---CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCC
Q 009077 413 ---KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNG 489 (544)
Q Consensus 413 ---~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 489 (544)
.++||+|||+|++++||.+++.||.||+||++|++|+|.+||++|.++|+|.+++|++.+ ++.++++|++.++
T Consensus 881 ~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~ 956 (5163)
T PRK12316 881 FVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESE 956 (5163)
T ss_pred CCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCC
Confidence 356999999999999999999999999999999999999999999999999999999875 6789999998877
Q ss_pred CCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHH
Q 009077 490 SKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKL 537 (544)
Q Consensus 490 ~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 537 (544)
.....++++++++.+||.|++|+.++++++||+|++||++|++|.+..
T Consensus 957 ~~~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~ 1004 (5163)
T PRK12316 957 GGDWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPE 1004 (5163)
T ss_pred CCCCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcc
Confidence 677789999999999999999999999999999999999999998654
No 89
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=7.1e-63 Score=515.98 Aligned_cols=507 Identities=24% Similarity=0.366 Sum_probs=407.4
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
..+|+...+.+.++.+|+++|+++. ++.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 18 ~~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 95 (567)
T PLN02479 18 TALTPLWFLERAAVVHPTRKSVVHG--SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGA 95 (567)
T ss_pred cccCHHHHHHHHHhhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCc
Confidence 3467899999999999999999986 67899999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc---------CcEEEEeCCCC-----------CCCccH
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH---------GARIVTIDPPP-----------ENCLHF 162 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~---------~~~~v~~~~~~-----------~~~~~~ 162 (544)
+++|++|.++.+++.++++.++++++++++...+...++.... ...++.++... .....+
T Consensus 96 v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
T PLN02479 96 VVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEY 175 (567)
T ss_pred EEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccH
Confidence 9999999999999999999999999999988765544433211 11233332211 122345
Q ss_pred HHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhh
Q 009077 163 SELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242 (544)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 242 (544)
.+++...............++.++++|||||||.||+|.++|.++......... .+++.++++.+..+|++|.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~~~ 251 (567)
T PLN02479 176 EKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNAL----IWGMNEGAVYLWTLPMFHCNGW 251 (567)
T ss_pred HHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHh----hcCCCCCCEEEEecchhhhhhH
Confidence 555433211111111223456788999999999999999999998655543332 2347788999999999999987
Q ss_pred HHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCC-CCCCCceEEEEecccCCHHHHHHH
Q 009077 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK-YDMSSIRTVMSGAAPMGKELEDAV 321 (544)
Q Consensus 243 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~-~~l~~l~~~~~~G~~l~~~~~~~~ 321 (544)
...+...+..|.+++ ...+++..+++.++++++|++.++|+++..|.+...... ..+++++.++++|+++++++.+++
T Consensus 252 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~ 330 (567)
T PLN02479 252 CFTWTLAALCGTNIC-LRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAM 330 (567)
T ss_pred HHHHHHHhhcCceEe-ccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHH
Confidence 555555566666554 456899999999999999999999999999987654332 246788999999999999999999
Q ss_pred HHHCCCCceeccccccccCccccccccccC------CCCccCCCeeeeccCCce-EEEEcCCCCCCCCCC--CceeEEEe
Q 009077 322 RAKLPHAKLGQGYGMTEAGPVLSMCLAFAK------EPFEIKSGACGTVVRNAE-MKIVDPDTGISLPRN--QAGEICIR 392 (544)
Q Consensus 322 ~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~~g~p~~~~~-~~i~d~~~~~~~~~g--~~Gel~v~ 392 (544)
.+. +.++++.||+||++..+..+..... ..........|.+.+++. ++++|++++.+++.+ +.|||+++
T Consensus 331 ~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~ 408 (567)
T PLN02479 331 SEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMR 408 (567)
T ss_pred Hhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEe
Confidence 875 7899999999998654443311000 000111234677888875 788887677777653 67999999
Q ss_pred cCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeee
Q 009077 393 GAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMK 472 (544)
Q Consensus 393 ~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~ 472 (544)
|++++.||+++++.+...+ .++||+|||+++++++|++++.||.+|+|+.+|.+|++.+||.+|.++|.|.+++|++..
T Consensus 409 g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~ 487 (567)
T PLN02479 409 GNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARP 487 (567)
T ss_pred ccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEecc
Confidence 9999999999999998888 689999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCceEEEEEEecCCCC-----CCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 473 DEAAGEVPVAFVVRSNGSK-----ITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 473 ~~~~~~~~~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
++..++.+++++++.++.. ...++|.++++.+++.|+.|..+.+ +.+|+|++||++|..|++.+...
T Consensus 488 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~ 559 (567)
T PLN02479 488 DERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEM 559 (567)
T ss_pred chhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhh
Confidence 8877888999998876532 3346899999999999999998776 67999999999999999887663
No 90
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=6.6e-63 Score=511.08 Aligned_cols=491 Identities=23% Similarity=0.329 Sum_probs=412.3
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
+++.+.|.++++.+|+++++.+. ++.+||+||.++++++|..|.+.|+++|++|+++++|+.+++++++||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~ 79 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL--GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAY 79 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 57889999999999999999876 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCE
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (544)
+|+++.++.+.+.++++..++++++++...... ......+..+ .+.+... ............++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~ 145 (503)
T PRK04813 80 IPVDVSSPAERIEMIIEVAKPSLIIATEELPLE------ILGIPVITLD-------ELKDIFA-TGNPYDFDHAVKGDDN 145 (503)
T ss_pred ecCCCCChHHHHHHHHHhcCCCEEEeccccccc------ccCCcEEehH-------Hhhhhhh-ccccccccccCCCCCc
Confidence 999999999999999999999999998764110 0011112111 1111100 0111112234567899
Q ss_pred EEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC---
Q 009077 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK--- 261 (544)
Q Consensus 185 ~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~--- 261 (544)
++++|||||||.||+|.++|.++.....+.... +.+..+++++...|++|..++ ..++.++..|+++++.+.
T Consensus 146 ~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~~~~ 220 (503)
T PRK04813 146 YYIIFTSGTTGKPKGVQISHDNLVSFTNWMLED----FALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPKDMT 220 (503)
T ss_pred EEEEECCCCCCCCcEEEeehHHHHHHHHHHHHH----cCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEcChhhh
Confidence 999999999999999999999998877766553 457889999999999999887 667789999999988775
Q ss_pred cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCc
Q 009077 262 FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGP 341 (544)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~ 341 (544)
.++..+++.+++++++++..+|+++..+..........++.+|.++++|+++++.+.+++.+.|+++.+++.||+||++.
T Consensus 221 ~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 300 (503)
T PRK04813 221 ANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATV 300 (503)
T ss_pred cCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchhee
Confidence 47889999999999999999999998876655444556789999999999999999999999998899999999999976
Q ss_pred cccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhc---CCCCcee
Q 009077 342 VLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTI---DKEGWLH 418 (544)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~~~~~~ 418 (544)
.++...............+.|.|.++++++++| +++.+++.|+.|||+++|+.++.||++++..+...+ +..+||+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~ 379 (503)
T PRK04813 301 AVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYH 379 (503)
T ss_pred EEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEE
Confidence 544332222222233455789999999999999 578889999999999999999999999998887765 3346999
Q ss_pred cCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCC----CH
Q 009077 419 TGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKI----TE 494 (544)
Q Consensus 419 TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----~~ 494 (544)
|||++++ ++|++++.||.+|+|+.+|+++++.+||+.+.++|+|.+++|++..+...++.+++++++.++... ..
T Consensus 380 tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 458 (503)
T PRK04813 380 TGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELT 458 (503)
T ss_pred CCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhH
Confidence 9999999 999999999999999999999999999999999999999999998777777888898887654211 12
Q ss_pred HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 495 DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 495 ~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
+++++++.+.++.+++|+.+++++++|+|++||++|++|++.+.
T Consensus 459 ~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 459 KAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred HHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 46899999999999999999999999999999999999999875
No 91
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-63 Score=529.70 Aligned_cols=503 Identities=22% Similarity=0.300 Sum_probs=391.2
Q ss_pred CCCCHHHHHHhhhccCCCccEEEeCC-------------------------CCceeeHHHHHHHHHHHHHHHHHcCCCCC
Q 009077 23 NHLPLHTYCFENISQFADRPCIINGP-------------------------TGDVYTYADVELTSRKVAAGLSKLGVQKG 77 (544)
Q Consensus 23 ~~~~~~~~l~~~a~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~g~~~g 77 (544)
+..|+.+.|.++++++|+++|+.+.. +.+.+||+||.++++++|+.|.++|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 45689999999999999999998741 24789999999999999999999999999
Q ss_pred CEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhh---cCcEEEEeCC
Q 009077 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH---HGARIVTIDP 154 (544)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~v~~~~ 154 (544)
|+|+|+++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|++......+...... ....++.++.
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~ 226 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDS 226 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999987766555443322 1235555543
Q ss_pred CCC-------CCccHHHHHhhcc--CC-CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCcc-
Q 009077 155 PPE-------NCLHFSELITQAD--EN-EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY- 223 (544)
Q Consensus 155 ~~~-------~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~- 223 (544)
... ...+|++++.... .. ........++++++++|||||||.||+|.+||+++.+.+......+...+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~ 306 (700)
T PTZ00216 227 LPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGP 306 (700)
T ss_pred CccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCC
Confidence 221 2346777654431 11 111234568999999999999999999999999998877765543322222
Q ss_pred CCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHH-------HHHhccceeccCcHHHHHHHHhcCCC-
Q 009077 224 LHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLME-------LVQKYKVTVAPFVPPIVLAVAKSGDV- 295 (544)
Q Consensus 224 ~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~-------~i~~~~~t~l~~~P~~l~~l~~~~~~- 295 (544)
+.+++++++.+|++|.++.. .....+..|+.+.+. ++..+.+ .++++++|++.++|.++..+.+....
T Consensus 307 ~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~ 382 (700)
T PTZ00216 307 PEEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAK 382 (700)
T ss_pred CCCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHH
Confidence 46789999999999999874 345567788877664 3444444 57889999999999999887642100
Q ss_pred ------------------------CCC----------------CCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 296 ------------------------DKY----------------DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 296 ------------------------~~~----------------~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
.+. ..+++|.+++||+++++++.++++..+ + .+++.||
T Consensus 383 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG 460 (700)
T PTZ00216 383 LPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWG 460 (700)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccC
Confidence 000 015789999999999999998888877 6 9999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCC-CCCCCCCceeEEEecCcccccccCChhhhhhhcCCC
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTG-ISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKE 414 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 414 (544)
+||++..++.. .......+++|+|+++++++|+|.+.. ...+.+..|||+++|++++.||+++++.+...|+.+
T Consensus 461 ~TEt~~~~~~~-----~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~d 535 (700)
T PTZ00216 461 LTETVCCGGIQ-----RTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDED 535 (700)
T ss_pred ccccccccccc-----CCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhcccc
Confidence 99998654432 122345688999999999999995431 233456679999999999999999999999999889
Q ss_pred CceecCceEEEcCCCcEEEEccccceEE-eCceeeCcHHHHHHHHcCCCccee--EEEeeeCCCCCceEEEEEEecCCC-
Q 009077 415 GWLHTGDIGYIDDDDELFIVDRLKELIK-FKGFQVAPAELEAMLIAHPNISDA--AVVPMKDEAAGEVPVAFVVRSNGS- 490 (544)
Q Consensus 415 ~~~~TgDl~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~ie~~l~~~~~v~~~--~v~~~~~~~~~~~~~~~v~~~~~~- 490 (544)
|||+|||+|++++||++++.||++|+|| .+|++|.|.+||+++.++|.|.++ +|++. + ....+++++++....
T Consensus 536 Gw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~--~-~~~~l~a~vv~~~~~~ 612 (700)
T PTZ00216 536 GWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVH--P-ARSYICALVLTDEAKA 612 (700)
T ss_pred CCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEe--c-CCceEEEEEecCHHHH
Confidence 9999999999999999999999999999 699999999999999999999974 34332 2 236778888865320
Q ss_pred -------CC--C------H----HHHHHHH-----HhcccCCCcccEEEEec------CCCCCCCcccchHHHHhHHhh
Q 009077 491 -------KI--T------E----DEIKQYI-----SKQVVFYKRINRVFFTD------SIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 491 -------~~--~------~----~~l~~~l-----~~~l~~~~~p~~~~~~~------~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.. + . +.+.+.+ +..+..+..|+.|.++. .-.+|+++|++|..++++|.+
T Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~ 691 (700)
T PTZ00216 613 MAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYAD 691 (700)
T ss_pred HHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHH
Confidence 00 0 0 1222222 23467788899888874 234699999999999999875
No 92
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-63 Score=506.12 Aligned_cols=457 Identities=27% Similarity=0.395 Sum_probs=391.0
Q ss_pred hccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHH
Q 009077 35 ISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPP 114 (544)
Q Consensus 35 a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 114 (544)
++..++++|+++. ++.+||+||.++++++|..|. ++++|+++++|+++++++++||+++|++++|++|.++.+
T Consensus 10 ~~~~~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~ 82 (471)
T PRK07787 10 AAAADIADAVRIG--GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVA 82 (471)
T ss_pred hcccCCceEEEeC--CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChH
Confidence 3456788999986 899999999999999999996 479999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCC
Q 009077 115 EIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTT 194 (544)
Q Consensus 115 ~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 194 (544)
++.++++.++++.++++..... . ....+.+.... ..+ .......++++++++||||||
T Consensus 83 ~l~~~l~~~~~~~il~~~~~~~------~--~~~~~~~~~~~---~~~-----------~~~~~~~~~~~a~i~~TSGTT 140 (471)
T PRK07787 83 ERRHILADSGAQAWLGPAPDDP------A--GLPHVPVRLHA---RSW-----------HRYPEPDPDAPALIVYTSGTT 140 (471)
T ss_pred HHHHHHHhcCCCEEEecCCccc------c--cccceeeeccc---ccc-----------ccCCCCCCCceEEEEECCCCC
Confidence 9999999999999999763110 0 00111110000 000 011124568999999999999
Q ss_pred CCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhc
Q 009077 195 GLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKY 274 (544)
Q Consensus 195 G~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~ 274 (544)
|.||+|.++|.++...+..... .+++.++++++..+|++|..|++..++.++..|+++++....++..+++.++ +
T Consensus 141 G~PK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~ 215 (471)
T PRK07787 141 GPPKGVVLSRRAIAADLDALAE----AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-E 215 (471)
T ss_pred CCCCEEEEeHHHHHHHHHHHHH----hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-h
Confidence 9999999999999887766554 3457889999999999999999888999999999999998899999999999 9
Q ss_pred cceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCC
Q 009077 275 KVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (544)
Q Consensus 275 ~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~ 354 (544)
+++++.++|.++..+.+.... ...++++|.++.||+++++++++++++.+ +.++++.||+||++...+.. ...
T Consensus 216 ~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-----~~~ 288 (471)
T PRK07787 216 GGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR-----ADG 288 (471)
T ss_pred CceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC-----CCC
Confidence 999999999999999875432 23567899999999999999999999988 78999999999998543322 112
Q ss_pred ccCCCeeeeccCCceEEEEcCCCCCCCC-CC-CceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEE
Q 009077 355 EIKSGACGTVVRNAEMKIVDPDTGISLP-RN-QAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELF 432 (544)
Q Consensus 355 ~~~~~~~g~p~~~~~~~i~d~~~~~~~~-~g-~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~ 432 (544)
....+++|.|+++++++|+|+ ++.+++ .+ ..|||+++|+++..||+++++.+...+..++||+|||+|++++||+++
T Consensus 289 ~~~~~~vG~~~~g~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~ 367 (471)
T PRK07787 289 ERRPGWVGLPLAGVETRLVDE-DGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHR 367 (471)
T ss_pred cccCCcccccCCCcEEEEECC-CCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEE
Confidence 234567999999999999995 467776 34 379999999999999999999998888779999999999999999999
Q ss_pred EEccc-cceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcc
Q 009077 433 IVDRL-KELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRI 511 (544)
Q Consensus 433 ~~GR~-~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p 511 (544)
+.||. |++++.+|.++++.+||+.|.+++.|.+++|++.++...++.+++++++. ...+.+++.+++++.++.+++|
T Consensus 368 ~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~--~~~~~~~l~~~l~~~l~~~~~P 445 (471)
T PRK07787 368 IVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGA--DDVAADELIDFVAQQLSVHKRP 445 (471)
T ss_pred EeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeC--CCCCHHHHHHHHHhhcccccCC
Confidence 99996 89999999999999999999999999999999998888888999998873 3467889999999999999999
Q ss_pred cEEEEecCCCCCCCcccchHHHHh
Q 009077 512 NRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 512 ~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
..++++++||+|.+||++|++|++
T Consensus 446 ~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 446 REVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred cEEEEeccCCCCCCccccHHHhcc
Confidence 999999999999999999999976
No 93
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5e-63 Score=521.73 Aligned_cols=507 Identities=24% Similarity=0.310 Sum_probs=394.0
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeCC---C--C--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 009077 22 PNHLPLHTYCFENISQFADRPCIINGP---T--G--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~~---~--~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (544)
|+..|+.+.|.+.++++|+++|+.+.. + + ..+||+|+.++++++|++|.+.|+++||+|+|+++|+++|++++
T Consensus 39 ~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~ 118 (660)
T PLN02430 39 SDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAM 118 (660)
T ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 456799999999999999999996421 1 1 35799999999999999999999999999999999999999999
Q ss_pred HHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhH-HHHHHHhhc-Cc-EEEEeCCCCC-----------CCc
Q 009077 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND-KVRDLSEHH-GA-RIVTIDPPPE-----------NCL 160 (544)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~-~~-~~v~~~~~~~-----------~~~ 160 (544)
+||+++|+++||+++.++.+++.++++.++++++|+++.... .+....... .. .++.++.... ...
T Consensus 119 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 198 (660)
T PLN02430 119 EACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTY 198 (660)
T ss_pred HHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEE
Confidence 999999999999999999999999999999999999876432 222211111 22 3444443211 124
Q ss_pred cHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCC-CccCCCCeEEEEecchhhH
Q 009077 161 HFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENP-NLYLHKEDVILCVLPLFHI 239 (544)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~ 239 (544)
+|++++..............++++++++|||||||.||+|.+||+++...+......... ...+.++|++++.+|++|.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~ 278 (660)
T PLN02430 199 SWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHI 278 (660)
T ss_pred EHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHH
Confidence 566665433222222233468999999999999999999999999998876654321110 1246789999999999999
Q ss_pred HhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCC-------------------------
Q 009077 240 YSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD------------------------- 294 (544)
Q Consensus 240 ~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~------------------------- 294 (544)
++... ...++..|+++++... ++..+++.+.+.++|++.++|.++..+.+...
T Consensus 279 ~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (660)
T PLN02430 279 LDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWM 356 (660)
T ss_pred HHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99854 4557888999877643 77889999999999999999999987764210
Q ss_pred --------CCC-CC----------C-CCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCC
Q 009077 295 --------VDK-YD----------M-SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPF 354 (544)
Q Consensus 295 --------~~~-~~----------l-~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~ 354 (544)
... .+ + .++|.+++||+++++++.+.++. ++++.+++.||+||++++.+... ...
T Consensus 357 ~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~-~~~~~i~~~YG~TE~~~~~~~~~----~~~ 431 (660)
T PLN02430 357 NRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRV-TSCAFVVQGYGLTETLGPTTLGF----PDE 431 (660)
T ss_pred hcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHH-hcCCCeeeecchhhhhhceEeec----ccc
Confidence 000 00 1 57899999999999998766654 43678999999999986554321 111
Q ss_pred ccCCCeeeeccCCceEEEEcC-CCC-CCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEE
Q 009077 355 EIKSGACGTVVRNAEMKIVDP-DTG-ISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELF 432 (544)
Q Consensus 355 ~~~~~~~g~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~ 432 (544)
....+++|.|.++++++++|. +.+ .+++.+..|||+|+|++++.||+++++.+...+ .+|||+|||+|++++||+++
T Consensus 432 ~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~~TGDig~~d~dG~l~ 510 (660)
T PLN02430 432 MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWFHTGDIGEILPNGVLK 510 (660)
T ss_pred CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hccceeccceEEECCCCcEE
Confidence 234688999999999999873 333 455666789999999999999999999998888 69999999999999999999
Q ss_pred EEccccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC--------C--CC--------
Q 009077 433 IVDRLKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS--------K--IT-------- 493 (544)
Q Consensus 433 ~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~--~~-------- 493 (544)
+.||++|+|+. +|++|+|.+||++|.++|.|.+++|++. ..++.++++|++.+.. . .+
T Consensus 511 i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (660)
T PLN02430 511 IIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGD---SFKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLP 587 (660)
T ss_pred EEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEec---CCcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCH
Confidence 99999999997 7999999999999999999999999983 3357889999876421 0 01
Q ss_pred --HHHHHHHH-----HhcccCCCcccEEEEecC------CCCCCCcccchHHHHhHHhh
Q 009077 494 --EDEIKQYI-----SKQVVFYKRINRVFFTDS------IPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 494 --~~~l~~~l-----~~~l~~~~~p~~~~~~~~------lP~t~~GK~~r~~l~~~~~~ 539 (544)
.+.+.+.+ +..|+.|.+++.+.+++. =.+|+++|++|..+.+.|.+
T Consensus 588 ~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02430 588 ELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQV 646 (660)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHH
Confidence 11222222 235899999999988753 25899999999999999875
No 94
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-62 Score=507.89 Aligned_cols=501 Identities=23% Similarity=0.294 Sum_probs=412.5
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
+|+.+++.+.++++|+++|+.+. ++.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG--DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 58999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-Cc-EEEEeCCCCC-----CCccHHHHHhhccCCCCCcc
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GA-RIVTIDPPPE-----NCLHFSELITQADENEIPAV 177 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~-~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 177 (544)
+|+++.++.+.+.++++.++++++++++.....+.+..... .. .++.++.... ...++++++..... .....
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 159 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSP-ERDFG 159 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCC-cCCCC
Confidence 99999999999999999999999999988777766654332 22 3444443221 13356666443221 11111
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCC-----CCccC------CCCeEEEEecchhhHHhhHHHH
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN-----PNLYL------HKEDVILCVLPLFHIYSLNSVL 246 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~p~~~~~g~~~~~ 246 (544)
... ++.++++|||||||.||+|.++|.++..........+. ....+ ..+++++..+|++|..++ ..+
T Consensus 160 ~~~-~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~-~~~ 237 (533)
T PRK07798 160 ERS-PDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQ-WAA 237 (533)
T ss_pred CCC-CCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhH-HHH
Confidence 222 34568999999999999999999998765543222110 01111 577899999999999998 478
Q ss_pred HHHHHhCcEEEEcc--CcCHHHHHHHHHhccceeccCcHHHHH-HHHhcCC-CCCCCCCCceEEEEecccCCHHHHHHHH
Q 009077 247 LCALRVGAAILIMQ--KFDIVKLMELVQKYKVTVAPFVPPIVL-AVAKSGD-VDKYDMSSIRTVMSGAAPMGKELEDAVR 322 (544)
Q Consensus 247 ~~~l~~g~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~-~l~~~~~-~~~~~l~~l~~~~~~G~~l~~~~~~~~~ 322 (544)
+.++..|+++++.+ .+++..+++.++++++|++.++|..+. .+.+... .....++++|.+++||+++++++.++++
T Consensus 238 ~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~ 317 (533)
T PRK07798 238 FAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALL 317 (533)
T ss_pred HHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHH
Confidence 89999999999988 789999999999999999999986553 3333322 2344578999999999999999999999
Q ss_pred HHCCCCceeccccccccCccccccccccCCCCccCCCee--eeccCCceEEEEcCCCCCCCCCCCc--eeEEEecCcccc
Q 009077 323 AKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGAC--GTVVRNAEMKIVDPDTGISLPRNQA--GEICIRGAQIMK 398 (544)
Q Consensus 323 ~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~--g~p~~~~~~~i~d~~~~~~~~~g~~--Gel~v~~~~~~~ 398 (544)
+.|++..+++.||+||++.+...... ...... +.+.++..++++|+ ++.+++.|+. |+++. ++.+..
T Consensus 318 ~~~~~~~~~~~YG~tE~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~i~~~-~~~~~~~g~~~~g~l~~-~~~~~~ 388 (533)
T PRK07798 318 ELLPNVVLTDSIGSSETGFGGSGTVA-------KGAVHTGGPRFTIGPRTVVLDE-DGNPVEPGSGEIGWIAR-RGHIPL 388 (533)
T ss_pred HHcCCCeEEeeecccccccccccCCC-------CCCccCCCCccCCCceEEEECC-CCCCCCCCCCCeeEEEe-ecCccc
Confidence 99988999999999999754443211 111122 37788999999995 5668888877 66664 567899
Q ss_pred cccCChhhhhhhcC---CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCC
Q 009077 399 GYLNDREATETTID---KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEA 475 (544)
Q Consensus 399 gy~~~~~~~~~~~~---~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~ 475 (544)
||++++..+...|. ..+||+|||+++++++|++++.||.+|+|+.+|.+|++.+||+++.+++.|.+++|++.++..
T Consensus 389 gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~ 468 (533)
T PRK07798 389 GYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDER 468 (533)
T ss_pred cccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCcc
Confidence 99999988877763 346999999999999999999999999999999999999999999999999999999988887
Q ss_pred CCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 476 AGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 476 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.++.+++++++.++...+.+++++++++.|+.|++|+.++++++||+|.+||++|+.|+++.++
T Consensus 469 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 469 WGQEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred cCceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhcc
Confidence 8888999999887777888999999999999999999999999999999999999999998764
No 95
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-62 Score=506.10 Aligned_cols=496 Identities=27% Similarity=0.413 Sum_probs=407.7
Q ss_pred HHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC
Q 009077 31 CFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF 110 (544)
Q Consensus 31 l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 110 (544)
....++++|+++|+++..+++.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 45778899999999986567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-Cc-EEEEeCC--CCCCCccHHHHHhhccCCCCCccCCCCCCEEE
Q 009077 111 YTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GA-RIVTIDP--PPENCLHFSELITQADENEIPAVKINPDDVVA 186 (544)
Q Consensus 111 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~-~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (544)
++.+.+.++++.++++.++++......+.+..... .. ..+.++. .......+++....... ......++.++
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~a~ 158 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLPA----TPIADESLGTD 158 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCCC----CCCCCcccccE
Confidence 99999999999999999999988776665554332 11 2233332 11122233333221111 11123346789
Q ss_pred EecCCCCCCCCchhhh--chHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCH
Q 009077 187 LPYSSGTTGLPKGVML--THKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (544)
Q Consensus 187 i~~TSGtTG~pk~v~~--t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~ 264 (544)
++|||||||.||+|.+ +|.++...... .......+.+.++++++...|++|.+++ ...+.++..|+++++.+.+++
T Consensus 159 il~TSGtTG~PKgv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~h~~~~-~~~~~~~~~g~~~~~~~~~~~ 236 (511)
T PRK13391 159 MLYSSGTTGRPKGIKRPLPEQPPDTPLPL-TAFLQRLWGFRSDMVYLSPAPLYHSAPQ-RAVMLVIRLGGTVIVMEHFDA 236 (511)
T ss_pred EEECCCCCCCCCEEEEccccchhhhhhHH-HHHHHHhcCCCCCCeEEEcCCHHHHHHH-HHHHHHHHcCceEEECCCCCH
Confidence 9999999999999995 45554322211 1111123457788999999999999888 556778899999999988999
Q ss_pred HHHHHHHHhccceeccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcc
Q 009077 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPV 342 (544)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~ 342 (544)
..+++.++++++|++.++|+++..+.+.... ....++++|.+++||+++++++++.+++.| +..+++.||+||++.+
T Consensus 237 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~ 315 (511)
T PRK13391 237 EQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGF 315 (511)
T ss_pred HHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccce
Confidence 9999999999999999999999888765432 223478999999999999999999999988 7889999999999875
Q ss_pred ccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCC-CceecCc
Q 009077 343 LSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKE-GWLHTGD 421 (544)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~-~~~~TgD 421 (544)
+... ........+++|.|+++ .++++| +++.+++.|+.|||+++|+ +..||+++++.+...+..+ +||+|||
T Consensus 316 ~~~~----~~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD 388 (511)
T PRK13391 316 TACD----SEEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGD 388 (511)
T ss_pred EEec----CccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCC
Confidence 4431 11122345788999999 689998 5788899999999999999 8889999998888777554 9999999
Q ss_pred eEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCC---CCHHHHH
Q 009077 422 IGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSK---ITEDEIK 498 (544)
Q Consensus 422 l~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~ 498 (544)
+++++++|.+++.||.+|+++.+|.++++.+||++|.++|.|.+++|+++++...++.+++++++.++.. ...++++
T Consensus 389 ~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 468 (511)
T PRK13391 389 IGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELI 468 (511)
T ss_pred EEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999988888888999888765433 2347899
Q ss_pred HHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 499 QYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 499 ~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
++++++++.+++|..+.+++++|+|++||++|+.|++.|.+-
T Consensus 469 ~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~~ 510 (511)
T PRK13391 469 AFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWGN 510 (511)
T ss_pred HHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhcc
Confidence 999999999999999999999999999999999999998764
No 96
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-63 Score=491.03 Aligned_cols=508 Identities=28% Similarity=0.392 Sum_probs=420.6
Q ss_pred CCHHHHHHhhh-cc-CCCccEEEeCCC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 25 LPLHTYCFENI-SQ-FADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 25 ~~~~~~l~~~a-~~-~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
+|+...+.... .. .++++++++... ...+||.|+.+.+.++|+.|.++|+++||+|++++|+.++++++++||+
T Consensus 63 ln~~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~ 142 (626)
T KOG1175|consen 63 LNACYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACA 142 (626)
T ss_pred hhhhHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHh
Confidence 44444443332 22 578888876532 2459999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHH---------HHHHHhhcC------cEEEEeCCCCCCCccHH
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK---------VRDLSEHHG------ARIVTIDPPPENCLHFS 163 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~~~------~~~v~~~~~~~~~~~~~ 163 (544)
++|++.+++...++..++...++..+++++++.+..... +.+...... ...+.+.... ....|+
T Consensus 143 r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~~ 221 (626)
T KOG1175|consen 143 RIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN-RDLFWS 221 (626)
T ss_pred hcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc-ccccHH
Confidence 999999999999999999999999999999998754322 222221111 1111111111 133454
Q ss_pred HHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhH
Q 009077 164 ELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLN 243 (544)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 243 (544)
... ....+..+....+.+++.+|+|||||||.||++.+++....-...... ...+++.++|++++.....|+.|.+
T Consensus 222 ~~~-~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~---~~~~d~q~~dv~~~~~d~GWi~g~~ 297 (626)
T KOG1175|consen 222 LEL-KKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTS---RYHFDLQPSDVLWCASDLGWITGHS 297 (626)
T ss_pred HHh-hhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhc---ceeccCCCcceEEEecccCeeeccc
Confidence 442 333334447778889999999999999999999999988765554433 2366899999999999999999999
Q ss_pred HHHHHHHHhCcEEEEccC--cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCC--CCCceEEEEecccCCHHHHH
Q 009077 244 SVLLCALRVGAAILIMQK--FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYD--MSSIRTVMSGAAPMGKELED 319 (544)
Q Consensus 244 ~~~~~~l~~g~~~v~~~~--~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~--l~~l~~~~~~G~~l~~~~~~ 319 (544)
+.++++|..|+++++.+. +++..+++++.++++|++...|+.++.|.+........ +++||++.++||++.++.++
T Consensus 298 ~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~e 377 (626)
T KOG1175|consen 298 YVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWE 377 (626)
T ss_pred hhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHH
Confidence 999999999999999764 58999999999999999999999999888776554433 35699999999999999999
Q ss_pred HHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCC-CceeEEEecC---c
Q 009077 320 AVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRN-QAGEICIRGA---Q 395 (544)
Q Consensus 320 ~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g-~~Gel~v~~~---~ 395 (544)
++.+.+....|++.||+||+|..+..+..... ...+++.+.|.+++.+.|.|+ ++..++.+ +.|+|+++.+ +
T Consensus 378 w~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---p~~pg~~~~p~~g~~v~i~de-~g~~~~~~~~~G~l~~~~~~P~~ 453 (626)
T KOG1175|consen 378 WWKRVTGLDPIYETYGQTETGGICITPKPGKL---PIKPGSAGKPFPGYDVQILDE-NGNELPPSTGNGELRLKPPWPPG 453 (626)
T ss_pred HHHHhcCccchhhceeeeccCceeeeccCCCC---CcCccccCCCCCCcceEEECC-CCCCcCCCCceeEEEEeCCCCcc
Confidence 99999933369999999999988876633221 577899999999999999995 78888765 8899999985 5
Q ss_pred ccccccCChhhhhhhcCC--CCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeC
Q 009077 396 IMKGYLNDREATETTIDK--EGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKD 473 (544)
Q Consensus 396 ~~~gy~~~~~~~~~~~~~--~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~ 473 (544)
.+++|+++++....+... .|+|.|||.+++|+||++++.||.||+|+++|.++.+.|||+++.++|.|.|++|++.++
T Consensus 454 ~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~ 533 (626)
T KOG1175|consen 454 MFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPD 533 (626)
T ss_pred ccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCC
Confidence 688999999966665534 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEecCCCCCCH---HHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 474 EAAGEVPVAFVVRSNGSKITE---DEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 474 ~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
+..++.+++||++.++....+ .+|.+++++.+.+++.|+.|.+++.||+|.+||+.|+.||+.+.+..
T Consensus 534 ~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~ 604 (626)
T KOG1175|consen 534 PIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKA 604 (626)
T ss_pred CCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCc
Confidence 999999999999998854443 46777888899999999999999999999999999999999887653
No 97
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-62 Score=507.51 Aligned_cols=506 Identities=27% Similarity=0.382 Sum_probs=408.9
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
++..+.|++.++.+|+++|+.+. +..+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 95 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG--DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVL 95 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEE
Confidence 68889999999999999999886 7889999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcC-cEEEEeCCCCC--------CCccHHHHHhhccCCCCC
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-ARIVTIDPPPE--------NCLHFSELITQADENEIP 175 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~ 175 (544)
+|++|.++..++.++++.++++.++++++..+.+.+...... .+.+.++.... ...+++.+..........
T Consensus 96 vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (545)
T PRK08162 96 NTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDPDFAW 175 (545)
T ss_pred eccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCccccc
Confidence 999999999999999999999999999988777665443322 22333322111 122344443322111111
Q ss_pred ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 176 ~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
....+.+++++++|||||||.||+|.++|.++......... .+.+..++++++.+|++|..++...++..+ .|+.
T Consensus 176 ~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~-~~g~ 250 (545)
T PRK08162 176 TLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNIL----AWGMPKHPVYLWTLPMFHCNGWCFPWTVAA-RAGT 250 (545)
T ss_pred cCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCCCCCCeeEeccCcHhhhhHHHHHHHHH-HccE
Confidence 12234468899999999999999999999987655544333 234677889999999999988855444444 5555
Q ss_pred EEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
.++...+++..+++.++++++|++.++|.++..|++........+...+.++++|+.+++++.+.+++. ++++++.||
T Consensus 251 ~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG 328 (545)
T PRK08162 251 NVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVYG 328 (545)
T ss_pred EEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeeccc
Confidence 556667899999999999999999999999999988654433345566778899999999999998764 799999999
Q ss_pred ccccCccccccccccCC------CCccCCCeeeeccC-CceEEEEcCCCCCCCCC-C-CceeEEEecCcccccccCChhh
Q 009077 336 MTEAGPVLSMCLAFAKE------PFEIKSGACGTVVR-NAEMKIVDPDTGISLPR-N-QAGEICIRGAQIMKGYLNDREA 406 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~------~~~~~~~~~g~p~~-~~~~~i~d~~~~~~~~~-g-~~Gel~v~~~~~~~gy~~~~~~ 406 (544)
+||++..+..+...... .........|.+.+ ...++++|++++.+++. | +.|||+++|+.++.||+++++.
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~ 408 (545)
T PRK08162 329 LTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKA 408 (545)
T ss_pred ccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhh
Confidence 99987555443211100 00111234555554 33578888777788865 3 4699999999999999999999
Q ss_pred hhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEe
Q 009077 407 TETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVR 486 (544)
Q Consensus 407 ~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 486 (544)
+...+ .++||+|||+++++++|++++.||.+|+++.+|.++++.+||..|.++|+|.+++|++.+++..++.+++++++
T Consensus 409 ~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~ 487 (545)
T PRK08162 409 TEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVEL 487 (545)
T ss_pred hHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEe
Confidence 98887 68999999999999999999999999999999999999999999999999999999999888778899999998
Q ss_pred cCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 487 SNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 487 ~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
.++...+.++++++++..++.+++|..+.+ ++||+|++||++|..|++.+.+=+
T Consensus 488 ~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~ 541 (545)
T PRK08162 488 KDGASATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLK 541 (545)
T ss_pred CCCCCCCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhh
Confidence 877777889999999999999999998865 679999999999999999876543
No 98
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-62 Score=536.52 Aligned_cols=487 Identities=20% Similarity=0.231 Sum_probs=389.1
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhC
Q 009077 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (544)
+..+++.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aG 521 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD--GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLG 521 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 55689999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCC---------CccHHHHHhhccC-
Q 009077 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPEN---------CLHFSELITQADE- 171 (544)
Q Consensus 102 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~~~~~~~~~- 171 (544)
++++|++|. ..+.++++.++++++|+++.....+.. ...++++++..... ...+++.......
T Consensus 522 av~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~----~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (994)
T PRK07868 522 AVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQ----LPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVEL 594 (994)
T ss_pred CEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHh----cCceEEEecCCccccccCCcchhhhhhhhcCcccccC
Confidence 999999995 578999999999999998776654432 23455555432110 0111111000000
Q ss_pred C-CCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHH
Q 009077 172 N-EIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCAL 250 (544)
Q Consensus 172 ~-~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 250 (544)
. ........++++++++|| ||||.||++.++|.++......... .+.+.++|++++.+|++|.+++...++.++
T Consensus 595 ~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~----~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l 669 (994)
T PRK07868 595 PGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTAS----AAALDRRDTVYCLTPLHHESGLLVSLGGAV 669 (994)
T ss_pred CcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhh----hcCCCCCCeEEEecChHHHhHHHHHHHHHh
Confidence 0 001112236899999998 5777777777777665443332222 345789999999999999999977777888
Q ss_pred HhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCce
Q 009077 251 RVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKL 330 (544)
Q Consensus 251 ~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v 330 (544)
..|+++++.+.++++.+++.++++++|++.++|+++..+++........++++|.++ |+.+++++++.+.+.|+++.+
T Consensus 670 ~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l 747 (994)
T PRK07868 670 VGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHV 747 (994)
T ss_pred ccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchhe
Confidence 888888888889999999999999999999999999999886544444567888766 345999999999999977899
Q ss_pred eccccccccCccccccccccCCCCccCCCeeeeccCCc-eEEEE--cC--------CCC--CCCCCCCceeEEEecCccc
Q 009077 331 GQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNA-EMKIV--DP--------DTG--ISLPRNQAGEICIRGAQIM 397 (544)
Q Consensus 331 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~-~~~i~--d~--------~~~--~~~~~g~~Gel~v~~~~~~ 397 (544)
++.||+||++.+.... .....+++|+|+|++ ++++. |+ +++ +.++.|+.|||+++++..
T Consensus 748 ~~~YG~TE~~~~~~~~-------~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~- 819 (994)
T PRK07868 748 VEFFATTDGQAVLANV-------SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP- 819 (994)
T ss_pred eeeeeccccccccccc-------CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC-
Confidence 9999999987543211 123557899999998 66654 21 334 457889999999998753
Q ss_pred ccccCChhhhh--hhc-CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCC
Q 009077 398 KGYLNDREATE--TTI-DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDE 474 (544)
Q Consensus 398 ~gy~~~~~~~~--~~~-~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~ 474 (544)
++ ++.+. ..+ ..+|||+|||+|++++||+|+++||.||+||++|.+|+|.+||++|.++|.|.+++|++++++
T Consensus 820 ---~~-p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~ 895 (994)
T PRK07868 820 ---ID-PTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVG 895 (994)
T ss_pred ---CC-hhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCC
Confidence 22 22221 123 248999999999999999999999999999998889999999999999999999999999876
Q ss_pred CCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 475 AAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 475 ~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
. ++.++++|++.++...+.++|++++++ ++.|++|+.|+++++||+|++||++|++|++.-.
T Consensus 896 ~-~~~~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 896 G-RQLAVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred C-CceEEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 5 578899999888777889999999986 8999999999999999999999999999987643
No 99
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.8e-63 Score=609.28 Aligned_cols=496 Identities=22% Similarity=0.315 Sum_probs=419.7
Q ss_pred CCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 009077 18 DIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (544)
Q Consensus 18 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (544)
..+.|...++.+.|.++++++|+++|+++. +.++||+||.++++++|+.|.++|+++|++|+|+++++++++++++|+
T Consensus 3713 ~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lav 3790 (4334)
T PRK05691 3713 ERDYPLEQSYVRLFEAQVAAHPQRIAASCL--DQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGS 3790 (4334)
T ss_pred cCCCccccCHHHHHHHHHHhCCCceEEEcC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 444555679999999999999999999987 788999999999999999999999999999999999999999999999
Q ss_pred HhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcC----cEEEEeCCCCCCCccHHHHHhhccCCC
Q 009077 98 SYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG----ARIVTIDPPPENCLHFSELITQADENE 173 (544)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (544)
+++|+++||++|.++.+++.++++.+++++++++............... ..++..+ +.........
T Consensus 3791 lkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 3860 (4334)
T PRK05691 3791 FKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWE----------EVQAGEVASH 3860 (4334)
T ss_pred HhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeec----------cccccccccc
Confidence 9999999999999999999999999999999999876554433322111 1111111 1101111112
Q ss_pred CCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhC
Q 009077 174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVG 253 (544)
Q Consensus 174 ~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g 253 (544)
.+.....+++.++++|||||||.||||.++|+++.+.+.+... .++++++++++...++++..+. ..++.++..|
T Consensus 3861 ~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~----~~~~~~~~~~~~~~s~~fd~s~-~~~~~~l~~G 3935 (4334)
T PRK05691 3861 NPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVP----YLALSEADVIAQTASQSFDISV-WQFLAAPLFG 3935 (4334)
T ss_pred CCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHH----hcCCCccceEEEecCCchhHHH-HHHHHHHhCC
Confidence 2233467899999999999999999999999999998877665 4568999999999999998888 6788899999
Q ss_pred cEEEEccC---cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCce
Q 009077 254 AAILIMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKL 330 (544)
Q Consensus 254 ~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v 330 (544)
+++++.+. .++..+++.++++++|++..+|+++..++... ...++++|.+++|||++++++.+.|.+.++++++
T Consensus 3936 ~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l 4012 (4334)
T PRK05691 3936 ARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGL 4012 (4334)
T ss_pred CEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeE
Confidence 99998764 57899999999999999999999999887543 2346789999999999999999999998889999
Q ss_pred eccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhh
Q 009077 331 GQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETT 410 (544)
Q Consensus 331 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~ 410 (544)
+|.||+||++..+++..... ........++|+|++++.+.++| +.++++|.|..|||+|+|+++++||+++++.+..+
T Consensus 4013 ~n~YG~TE~t~~~~~~~~~~-~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~ 4090 (4334)
T PRK05691 4013 VNAYGPAECSDDVAFFRVDL-ASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALA 4090 (4334)
T ss_pred EeCccCccceeEEEEEEccc-ccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcccchhh
Confidence 99999999997665432211 11222345799999999999999 67889999999999999999999999999999988
Q ss_pred cC-------CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEE
Q 009077 411 ID-------KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAF 483 (544)
Q Consensus 411 ~~-------~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 483 (544)
|. +.+||+|||++++++||.++++||.|++||++|.+|.+.+||+.|.++|+|.+++|+... ...++.++++
T Consensus 4091 f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~-~~~~~~l~a~ 4169 (4334)
T PRK05691 4091 FVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQE-GVNGKHLVGY 4169 (4334)
T ss_pred cccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEec-CCCCcEEEEE
Confidence 73 357999999999999999999999999999999999999999999999999998886543 4556788999
Q ss_pred EEecCCCCC---CHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 484 VVRSNGSKI---TEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 484 v~~~~~~~~---~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
++...+... ..++++++|++.||.|++|..++.++.||+|++||+||++|.+.
T Consensus 4170 ~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4170 LVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred EeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 887654322 23679999999999999999999999999999999999999865
No 100
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-62 Score=510.89 Aligned_cols=509 Identities=22% Similarity=0.331 Sum_probs=405.5
Q ss_pred CCCCCCCCCHHHHHHhhhccCCCccEEEeCCC-CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 009077 18 DIYIPNHLPLHTYCFENISQFADRPCIINGPT-GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLG 96 (544)
Q Consensus 18 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA 96 (544)
...+++-.++.+++...++++|+..++..... .+.+||.||+.++.++|++|.++|+++|++|+++++|+++++++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA 93 (579)
T PRK09192 14 PRRYADFPTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFA 93 (579)
T ss_pred cccccchhhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHH
Confidence 34556678999999999999987665533211 26799999999999999999999999999999999999999999999
Q ss_pred HHhhCCeEeecCCCCC-------HHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhc
Q 009077 97 ASYIGATSTTANPFYT-------PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQA 169 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 169 (544)
|+++|++++|+++..+ .+++.++++.++++++++++...+.+.+......... ...+.++....
T Consensus 94 ~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 164 (579)
T PRK09192 94 CQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLH---------VLSHAWFKALP 164 (579)
T ss_pred HHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccc---------eeehhhhcccC
Confidence 9999999999987543 5789999999999999999887666555432211111 11223221111
Q ss_pred cCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHH
Q 009077 170 DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCA 249 (544)
Q Consensus 170 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~ 249 (544)
..........++++++++|||||||.||+|.++|+++.......... .+++.++|+++..+|++|.+|+...++.+
T Consensus 165 -~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~ 240 (579)
T PRK09192 165 -EADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHD---GLKVRPGDRCVSWLPFYHDMGLVGFLLTP 240 (579)
T ss_pred -CCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhh---cccCCCCCeEEEeCCCCCcchhHHHHHHH
Confidence 11112223567899999999999999999999999998877655431 34578899999999999999997778888
Q ss_pred HHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCC---CCCCCCCCceEEEEecccCCHHHHHHHH
Q 009077 250 LRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD---VDKYDMSSIRTVMSGAAPMGKELEDAVR 322 (544)
Q Consensus 250 l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~---~~~~~l~~l~~~~~~G~~l~~~~~~~~~ 322 (544)
+..|+++++... .++..+++.+.+++++++...|..+..+..... .....++++|.+++||+++++++.+.+.
T Consensus 241 l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 320 (579)
T PRK09192 241 VATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFA 320 (579)
T ss_pred HHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHH
Confidence 999999877652 268889999999999987765554544443321 2234578999999999999999999999
Q ss_pred HHCCC-----CceeccccccccCccccccccccCC-----------------------CCccCCCeeeeccCCceEEEEc
Q 009077 323 AKLPH-----AKLGQGYGMTEAGPVLSMCLAFAKE-----------------------PFEIKSGACGTVVRNAEMKIVD 374 (544)
Q Consensus 323 ~~~~~-----~~v~~~yG~tE~~~~~~~~~~~~~~-----------------------~~~~~~~~~g~p~~~~~~~i~d 374 (544)
+.++. ..+++.||+||++..++........ .......++|.|+|+++++++|
T Consensus 321 ~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d 400 (579)
T PRK09192 321 EAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN 400 (579)
T ss_pred HHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC
Confidence 88731 3589999999998655432110000 0001135789999999999999
Q ss_pred CCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHH
Q 009077 375 PDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELE 454 (544)
Q Consensus 375 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie 454 (544)
+++..++.|+.|||+++|++++.||+++ ..+...+..++||+|||+|++ ++|++++.||.+|+|+++|++|+|.+||
T Consensus 401 -~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE 477 (579)
T PRK09192 401 -EAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIE 477 (579)
T ss_pred -CCCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHH
Confidence 4678899999999999999999999999 566666678999999999999 9999999999999999999999999999
Q ss_pred HHHHcCCCcc--eeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhccc-CCCcccEEEEec--CCCCCCCcccc
Q 009077 455 AMLIAHPNIS--DAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVV-FYKRINRVFFTD--SIPKAPSGKIL 529 (544)
Q Consensus 455 ~~l~~~~~v~--~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~~~--~lP~t~~GK~~ 529 (544)
+.|.++|+|. +++|+++.++. ++.++++++..++...+.++|.+++++.+. .++.|..+.++. +||+|++||++
T Consensus 478 ~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i~~~~~~~lP~t~~GKv~ 556 (579)
T PRK09192 478 WIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAALVRSEFGVEAAVELVPPHSLPRTSSGKLS 556 (579)
T ss_pred HHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCCceEEEeCCCCcCCCCCcchh
Confidence 9999999998 89999988875 457888887766555667889999998875 578888777775 89999999999
Q ss_pred hHHHHhHHhhcccC
Q 009077 530 RKDLRTKLAAGDLR 543 (544)
Q Consensus 530 r~~l~~~~~~~~~~ 543 (544)
|++|++++.+|.+.
T Consensus 557 R~~l~~~~~~~~~~ 570 (579)
T PRK09192 557 RAKAKKRYLSGAFA 570 (579)
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999998764
No 101
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.7e-62 Score=490.93 Aligned_cols=491 Identities=30% Similarity=0.413 Sum_probs=385.3
Q ss_pred CCCCCCHHHHHHhhhccCCCccEEEeCCCC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 21 IPNHLPLHTYCFENISQFADRPCIINGPTG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 21 ~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
.....++..++.++++.+|+.+++.+...+ +.+||+|+++++.++|++|.+.|++.||+|+|++.|+++|+++.+||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~ 91 (613)
T COG1022 12 VAEIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAIL 91 (613)
T ss_pred hhhcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 345579999999999999999899866543 789999999999999999999999779999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch-hHHHHHHHhhcCc--EEEE-eC---CC-CCCCccHHHH-----
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY-NDKVRDLSEHHGA--RIVT-ID---PP-PENCLHFSEL----- 165 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~--~~v~-~~---~~-~~~~~~~~~~----- 165 (544)
.+|++.||+.++++.+++.++|+.++++++|++... .+.+......... .... .+ .. ......++..
T Consensus 92 ~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (613)
T COG1022 92 ALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGI 171 (613)
T ss_pred HcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccc
Confidence 999999999999999999999999999999999854 4444444332110 0000 00 00 0001111110
Q ss_pred H---hhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhh
Q 009077 166 I---TQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242 (544)
Q Consensus 166 ~---~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 242 (544)
. ...........+..++|++.|+|||||||.||||.+||+|+.+++........ ..+++|+.++.+|+.|++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~---~~~~~d~~LsfLPlaHi~Er 248 (613)
T COG1022 172 SLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP---PIGPGDRVLSFLPLAHIFER 248 (613)
T ss_pred hhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC---CCCCCcEEEEeCcHHHHHHH
Confidence 0 00001111124567899999999999999999999999999999988876332 37899999999999999998
Q ss_pred HHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcC----C------------------------
Q 009077 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG----D------------------------ 294 (544)
Q Consensus 243 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~----~------------------------ 294 (544)
++.....+..|.++.. ..++..+++.+++.+||++.++|.+|..+.+.. .
T Consensus 249 ~~~~~~~~~~g~~~~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~ 326 (613)
T COG1022 249 AFEGGLALYGGVTVLF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRA 326 (613)
T ss_pred HHHHHHHhhcceEEEe--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh
Confidence 6554444444444444 458999999999999999999999997664300 0
Q ss_pred ---------------------CCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCC
Q 009077 295 ---------------------VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEP 353 (544)
Q Consensus 295 ---------------------~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~ 353 (544)
.+... ..+|.+++||+++++++...++.. ++++.+.||+||+++++++. .+
T Consensus 327 ~~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~-----~~ 398 (613)
T COG1022 327 LLGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVN-----PP 398 (613)
T ss_pred hcccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEc-----cc
Confidence 00011 378899999999999999999988 89999999999999888765 56
Q ss_pred CccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEE
Q 009077 354 FEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFI 433 (544)
Q Consensus 354 ~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~ 433 (544)
.....+++|.|+|+++++|+|. |||+|+||++++|||++++.|.+.|+.||||+|||+|.++++|++++
T Consensus 399 ~~~~~gtvG~p~p~~evKI~d~-----------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i 467 (613)
T COG1022 399 DRFVLGTVGKPLPGIEVKIADD-----------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVI 467 (613)
T ss_pred cCcccCCcCCcCCCceEEEccC-----------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEE
Confidence 6778899999999999999982 99999999999999999999999999999999999999999999999
Q ss_pred EccccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCC------------CH------
Q 009077 434 VDRLKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKI------------TE------ 494 (544)
Q Consensus 434 ~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~------------~~------ 494 (544)
.||+.|.|+. +|++|.|..||+.+.++|.|.+.+|++ .+ ...+.++|++..+.-. +.
T Consensus 468 ~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~---k~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~ 543 (613)
T COG1022 468 TGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DD---KKFLVALIVPDFDALEKWAESLNKVISASREELARD 543 (613)
T ss_pred eecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cC---CcceEEEEeCCHHHHHHHHHhccccccCCHHHHhhC
Confidence 9999999999 999999999999999999999999998 22 3567888887654110 11
Q ss_pred HHHHHHHH-------hcccCCCcccEEEEec-C-----CCCCCCcccchHHHHhHHhh
Q 009077 495 DEIKQYIS-------KQVVFYKRINRVFFTD-S-----IPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 495 ~~l~~~l~-------~~l~~~~~p~~~~~~~-~-----lP~t~~GK~~r~~l~~~~~~ 539 (544)
.++.+... .....+..+..+..+. . --.|++-|++|....+.+.+
T Consensus 544 ~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~ 601 (613)
T COG1022 544 PKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKD 601 (613)
T ss_pred HHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhh
Confidence 12222221 1123445565555553 2 34588999999998888764
No 102
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-61 Score=498.74 Aligned_cols=487 Identities=30% Similarity=0.504 Sum_probs=402.7
Q ss_pred EEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHh
Q 009077 43 CIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIA 122 (544)
Q Consensus 43 a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 122 (544)
|++....++.+||.||.+.++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++...+.++++.
T Consensus 2 ~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~ 81 (502)
T PRK08276 2 AVIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDD 81 (502)
T ss_pred ceEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhc
Confidence 34444448999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecchhHHHHHHHhhc--CcEEEEeC-CCCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCch
Q 009077 123 SKAKIIITQAVYNDKVRDLSEHH--GARIVTID-PPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKG 199 (544)
Q Consensus 123 ~~~~~vi~~~~~~~~~~~~~~~~--~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~ 199 (544)
.+++++++++...+.+.+..... ....+.+. ........+++....... ......++.++++|||||||.||+
T Consensus 82 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGtTG~PK~ 157 (502)
T PRK08276 82 SGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQPD----TPIADETAGADMLYSSGTTGRPKG 157 (502)
T ss_pred CCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcCCC----CCCCCCCcceEEEECCCCCCCCce
Confidence 99999999988777665544332 22333332 222223345444222111 112245678999999999999999
Q ss_pred hhhchHHHHHHHH--HhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccce
Q 009077 200 VMLTHKGLVTSVA--QQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVT 277 (544)
Q Consensus 200 v~~t~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t 277 (544)
|.++|.++..... ..............++++++..|++|..++.. .+.++..|+++++.+.+++..+++.++++++|
T Consensus 158 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t 236 (502)
T PRK08276 158 IKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDAEEALALIERYRVT 236 (502)
T ss_pred EEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCHHHHHHHHHHhCCe
Confidence 9988776543221 11111111122356789999999999988844 45789999999999889999999999999999
Q ss_pred eccCcHHHHHHHHhcCCC--CCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCc
Q 009077 278 VAPFVPPIVLAVAKSGDV--DKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFE 355 (544)
Q Consensus 278 ~l~~~P~~l~~l~~~~~~--~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~ 355 (544)
++.++|+++..+++.... ...+++++|.++++|++++.++++++.+.+ +..+++.||+||++.++.... ....
T Consensus 237 ~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~----~~~~ 311 (502)
T PRK08276 237 HSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS----EDWL 311 (502)
T ss_pred EEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC----cccc
Confidence 999999999999876542 234578999999999999999999999988 788999999999987554321 1122
Q ss_pred cCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEc
Q 009077 356 IKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVD 435 (544)
Q Consensus 356 ~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~G 435 (544)
...++.|.|+ ++.++++| +++.+++.|+.|||+++|+.+..||++++..+...+..++||+|||+++++++|.+++.|
T Consensus 312 ~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~G 389 (502)
T PRK08276 312 AHPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTD 389 (502)
T ss_pred ccCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEec
Confidence 3456889999 88999999 467889999999999999999999999999998888777999999999999999999999
Q ss_pred cccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCH---HHHHHHHHhcccCCCccc
Q 009077 436 RLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITE---DEIKQYISKQVVFYKRIN 512 (544)
Q Consensus 436 R~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~ 512 (544)
|++|+++.+|.++++.+||.+|.++|+|.++++++..++..++.+++++++.++...+. +++.+.++++++.++.|.
T Consensus 390 R~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~ 469 (502)
T PRK08276 390 RKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRLAHYKCPR 469 (502)
T ss_pred cCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCc
Confidence 99999999999999999999999999999999999998888899999999876654443 479999999999999999
Q ss_pred EEEEecCCCCCCCcccchHHHHhHHhhcc
Q 009077 513 RVFFTDSIPKAPSGKILRKDLRTKLAAGD 541 (544)
Q Consensus 513 ~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 541 (544)
.+++++++|+|++||++|.+|++.|.++.
T Consensus 470 ~i~~~~~lP~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 470 SIDFEDELPRTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred EEEEecCCCCCcccchhHHHHHHHHHhhh
Confidence 99999999999999999999999987654
No 103
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.3e-61 Score=498.20 Aligned_cols=485 Identities=28% Similarity=0.417 Sum_probs=399.7
Q ss_pred EEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHh
Q 009077 43 CIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIA 122 (544)
Q Consensus 43 a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 122 (544)
|++.. ++.+||.||.++++++|++|.++|+++|++|+++++|+++++++++||+++|+++++++|.++.+++.++++.
T Consensus 4 ~~~~~--~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 81 (509)
T PRK12406 4 TIISG--DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILED 81 (509)
T ss_pred EEEEC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhc
Confidence 55554 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecchhHHHHHHHhhcCcEEEEeCCC----------------CCCCccHHHHHhhccCCCCCccCCCCCCEEE
Q 009077 123 SKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP----------------PENCLHFSELITQADENEIPAVKINPDDVVA 186 (544)
Q Consensus 123 ~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (544)
+++++++++......+.+.... ....+..... ......+++.+... .+.....++++++
T Consensus 82 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~ 156 (509)
T PRK12406 82 SGARVLIAHADLLHGLASALPA-GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQ----EPYDGPPVPQPQS 156 (509)
T ss_pred cCCcEEEEccchhhhhhhhhhc-ccceeecccccccccccccccccccCCCCccCHHHHhccc----CccCCCCCCCceE
Confidence 9999999988766554433211 1122211111 11223344432211 1112335689999
Q ss_pred EecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHH
Q 009077 187 LPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVK 266 (544)
Q Consensus 187 i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~ 266 (544)
++|||||||.||+|.++|........... .....+++.++++++...|++|..+... .+.++..|+++++.+..++..
T Consensus 157 i~~TSGtTG~PK~v~~s~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~ 234 (509)
T PRK12406 157 MIYTSGTTGHPKGVRRAAPTPEQAAAAEQ-MRALIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGVLVLQPRFDPEE 234 (509)
T ss_pred EEECCCCCCCCceEEEechhHHHHHHHHH-hhhhhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheEEEEccCCCHHH
Confidence 99999999999999987665433322211 1112456789999999999999887744 345678899998888889999
Q ss_pred HHHHHHhccceeccCcHHHHHHHHhcCC--CCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcccc
Q 009077 267 LMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (544)
Q Consensus 267 ~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~ 344 (544)
+++.++++++|++.++|+++..+++... ....+++++|.+++||+++++++++.+.+.+ ++.+++.||+||++.++.
T Consensus 235 ~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~ 313 (509)
T PRK12406 235 LLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTF 313 (509)
T ss_pred HHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEe
Confidence 9999999999999999999999987643 2234568999999999999999999999988 789999999999997654
Q ss_pred ccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccc-cccCChhhhhhhcCCCCceecCceE
Q 009077 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMK-GYLNDREATETTIDKEGWLHTGDIG 423 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~~~~~~TgDl~ 423 (544)
.+. .......+++|.|+++++++++|+ ++.+++.|+.|||+++++.+.. +|++++..+.... .++||+|||++
T Consensus 314 ~~~----~~~~~~~~~~G~~~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~ 387 (509)
T PRK12406 314 ATS----EDALSHPGTVGKAAPGAELRFVDE-DGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVG 387 (509)
T ss_pred cCc----ccccccCCCcCccCCCcEEEEECC-CCCCCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEE
Confidence 321 122234568899999999999994 6788999999999999998875 8888887776554 78999999999
Q ss_pred EEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHh
Q 009077 424 YIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISK 503 (544)
Q Consensus 424 ~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 503 (544)
+++++|++++.||.+|+|+.+|.+|++.+||+.|.++++|.++++++..+...++.+++++++.++...+.+++++.+++
T Consensus 388 ~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 467 (509)
T PRK12406 388 YLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKA 467 (509)
T ss_pred EEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988887888999998877666788999999999
Q ss_pred cccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhcccC
Q 009077 504 QVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 504 ~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
.++.+++|..+.+++++|+|++||++|++|++.+....=|
T Consensus 468 ~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~~~~ 507 (509)
T PRK12406 468 RLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWANAGR 507 (509)
T ss_pred hcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999998765433
No 104
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-62 Score=515.00 Aligned_cols=502 Identities=21% Similarity=0.283 Sum_probs=388.8
Q ss_pred CCCCCCCCCCHHHHHHhhhccCCCccEEEeCCC--C--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHH
Q 009077 17 PDIYIPNHLPLHTYCFENISQFADRPCIINGPT--G--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVF 92 (544)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~--~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~ 92 (544)
+-++.+...|+.+.|+++++++|+++|+++.+. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++
T Consensus 41 ~~~~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~ 120 (624)
T PRK12582 41 RHPLGPYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHAL 120 (624)
T ss_pred CCCCCCcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHH
Confidence 344445567999999999999999999987532 1 689999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCeEeecCCCCCH-----HHHHHHHHhcCceEEEEecch-hHHHHHHHhhcCcEEEEeCCCCC--CCccHHH
Q 009077 93 AFLGASYIGATSTTANPFYTP-----PEIAKQAIASKAKIIITQAVY-NDKVRDLSEHHGARIVTIDPPPE--NCLHFSE 164 (544)
Q Consensus 93 ~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~ 164 (544)
+++||+++|++++|++|.++. +++.++++.++++++|+++.. .............+++.++.... ....+.+
T Consensus 121 ~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 200 (624)
T PRK12582 121 MTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFAD 200 (624)
T ss_pred HHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHH
Confidence 999999999999999999875 899999999999999998642 22222222222345555543221 2345555
Q ss_pred HHhhccCCCC--CccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCC---CCeEEEEecchhhH
Q 009077 165 LITQADENEI--PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLH---KEDVILCVLPLFHI 239 (544)
Q Consensus 165 ~~~~~~~~~~--~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~ 239 (544)
+......... ......++++++++|||||||.||+|.+||+++........... ... ..++.++.+|++|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~----~~~~~~~~~~~l~~lPl~h~ 276 (624)
T PRK12582 201 LAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR----PREPDPPPPVSLDWMPWNHT 276 (624)
T ss_pred HhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc----cccCCCCCceEEEechHHHH
Confidence 5332211111 11235678999999999999999999999999987766543321 122 35799999999999
Q ss_pred HhhHHHHHHHHHhCcEEEEccC-cC---HHHHHHHHHhccceeccCcHHHHHHHHhcCCCCC----CCCCCceEEEEecc
Q 009077 240 YSLNSVLLCALRVGAAILIMQK-FD---IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK----YDMSSIRTVMSGAA 311 (544)
Q Consensus 240 ~g~~~~~~~~l~~g~~~v~~~~-~~---~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~----~~l~~l~~~~~~G~ 311 (544)
+|+...++.++..|+++++.+. ++ ...+++.++++++|++.++|.++..|++...... ..++++|.+++||+
T Consensus 277 ~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa 356 (624)
T PRK12582 277 MGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGA 356 (624)
T ss_pred HhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCC
Confidence 9987778889999999998653 33 3456777889999999999999998876543221 23678999999999
Q ss_pred cCCHHHHHHHHHHC----C-CCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCc
Q 009077 312 PMGKELEDAVRAKL----P-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQA 386 (544)
Q Consensus 312 ~l~~~~~~~~~~~~----~-~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~ 386 (544)
++++++.+.+.+.+ + ++.+++.||+||++.++... .......+++|+|+|++++++++ .|+.
T Consensus 357 ~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~-----~~~~~~~~svG~p~pg~~v~i~~--------~G~~ 423 (624)
T PRK12582 357 TLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGT-----HWDTERVGLIGLPLPGVELKLAP--------VGDK 423 (624)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecc-----cCCCCCCCCCCcCCCCcEEEEcc--------CCCc
Confidence 99999999998863 2 46899999999998655421 11124467899999999999964 3678
Q ss_pred eeEEEecCcccccccCChhhhhhhcCCCCceecCceEEE-c---CCCcEEEEccccceEEe-CceeeCcHHHH--HHHHc
Q 009077 387 GEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYI-D---DDDELFIVDRLKELIKF-KGFQVAPAELE--AMLIA 459 (544)
Q Consensus 387 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~-~---~~g~l~~~GR~~d~i~~-~G~~v~~~~ie--~~l~~ 459 (544)
|||+++|++++.||+++++.+...++.+|||+|||+|++ + ++|++++.||++|+|+. +|++|++.+|| .++.+
T Consensus 424 GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~ 503 (624)
T PRK12582 424 YEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAAC 503 (624)
T ss_pred eEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhc
Confidence 999999999999999999999888888999999999998 4 46899999999999996 89999999885 68889
Q ss_pred CCCcceeEEEeeeCCCCCceEEEEEEec----------CCC----CCCHHHHHHHHHhcccCCC--------cccEEEEe
Q 009077 460 HPNISDAAVVPMKDEAAGEVPVAFVVRS----------NGS----KITEDEIKQYISKQVVFYK--------RINRVFFT 517 (544)
Q Consensus 460 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~----------~~~----~~~~~~l~~~l~~~l~~~~--------~p~~~~~~ 517 (544)
+|.|.+++|++++++..+ ++|++. ++. ..+.+++.++++..+..++ +|.++.++
T Consensus 504 ~p~V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 579 (624)
T PRK12582 504 SPVIHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIARALLM 579 (624)
T ss_pred CcchheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEEEEEe
Confidence 999999999997665433 333322 111 1133566666655555544 99999999
Q ss_pred cCCCC------CCCcccchHHHHhHHhh
Q 009077 518 DSIPK------APSGKILRKDLRTKLAA 539 (544)
Q Consensus 518 ~~lP~------t~~GK~~r~~l~~~~~~ 539 (544)
+.+|+ |++||++|+.+.++|.+
T Consensus 580 ~~~~~~~~g~~t~~~~~~R~~~~~~y~~ 607 (624)
T PRK12582 580 TEPPSIDAGEITDKGYINQRAVLERRAA 607 (624)
T ss_pred CCCCCccCCcCCccccccHHHHHHHHHH
Confidence 88775 56788899999888764
No 105
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.8e-62 Score=493.08 Aligned_cols=428 Identities=25% Similarity=0.322 Sum_probs=357.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 009077 52 VYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (544)
Q Consensus 52 ~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 130 (544)
-+.|+||.++++++|+.|.++|+ ++|++|+++++|++++++++|||+++|++++|++|.++..++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred ecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHH
Q 009077 131 QAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTS 210 (544)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~ 210 (544)
+....... .. . . . .......+++.++++|||||||.||+|.+||+++...
T Consensus 99 ~~~~~~~~-------------~~-~-----------~---~--~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~ 148 (452)
T PRK07445 99 LDQLKLSH-------------PP-P-----------L---P--SQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTAS 148 (452)
T ss_pred cCcccccc-------------CC-C-----------C---C--ccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHH
Confidence 76532110 00 0 0 0 0011235689999999999999999999999999877
Q ss_pred HHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHH
Q 009077 211 VAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVA 290 (544)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (544)
+...... +++.+ ++.++.+|++|.+|+ ..++.++..|+++++.+.............++++++.++|+++..++
T Consensus 149 ~~~~~~~----~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~ 222 (452)
T PRK07445 149 VQGFQRY----FQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLL 222 (452)
T ss_pred HHHHHHH----hcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHH
Confidence 7665542 23444 457889999999998 56778899999999876432222233445788999999999999988
Q ss_pred hcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceE
Q 009077 291 KSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEM 370 (544)
Q Consensus 291 ~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~ 370 (544)
+.. ...++++|.+++||+++++++.+.+.+ + ++++++.||+||++...... .+........++|+|+|++++
T Consensus 223 ~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~---~~~~~~~~~~~~G~~~p~~~v 294 (452)
T PRK07445 223 QLR---PQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATL---KPDDFLAGNNSSGQVLPHAQI 294 (452)
T ss_pred hhC---hhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhccccccc---CchhhccCCCcCCccCCCCeE
Confidence 632 234689999999999999999998875 4 88999999999997543321 111112245678999999999
Q ss_pred EEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCc
Q 009077 371 KIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAP 450 (544)
Q Consensus 371 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~ 450 (544)
+++ .|+.|||+++|+.++.||+++.. ..++||+|||++++++||++++.||.||+|+.+|++|+|
T Consensus 295 ~i~---------~g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p 359 (452)
T PRK07445 295 TIP---------ANQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYP 359 (452)
T ss_pred EEc---------CCCcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECH
Confidence 997 35679999999999999997532 257899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccch
Q 009077 451 AELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILR 530 (544)
Q Consensus 451 ~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r 530 (544)
.+||+.|.++|+|.+++|++++++..++.++++++..++ ..+.++++++++++++.|++|..++++++||+|++||++|
T Consensus 360 ~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r 438 (452)
T PRK07445 360 AEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDP-SISLEELKTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINR 438 (452)
T ss_pred HHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCC-CCCHHHHHHHHHHhCCcccCCeEEEEecCCCCCCCcccCH
Confidence 999999999999999999999998888999999987654 4668899999999999999999999999999999999999
Q ss_pred HHHHhHHhh
Q 009077 531 KDLRTKLAA 539 (544)
Q Consensus 531 ~~l~~~~~~ 539 (544)
++|++++.+
T Consensus 439 ~~L~~~~~~ 447 (452)
T PRK07445 439 QQLQQIAVQ 447 (452)
T ss_pred HHHHHHHHH
Confidence 999998765
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.7e-61 Score=543.55 Aligned_cols=495 Identities=22% Similarity=0.320 Sum_probs=404.3
Q ss_pred CCCHHHHHHhhhccCCC-ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 24 HLPLHTYCFENISQFAD-RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
..++.+.+.+.++++|+ +.++.+ .+++++||+||+++++++|+.|.+ |+++||+|+++++|+++++++++||+++|+
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~-~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVED-PVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeEC-CCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 36788889999999875 566654 236789999999999999999986 999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHH--HHHHhhc--CcEEEEeCCCCCCCccHHHHHh--hccCCCCCc
Q 009077 103 TSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKV--RDLSEHH--GARIVTIDPPPENCLHFSELIT--QADENEIPA 176 (544)
Q Consensus 103 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~ 176 (544)
+++|++|.++.+++.++++.++++++++++...+.. ....... ..+++.+++.......++.+.. ....+..+.
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFPLVYF 787 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCCcccc
Confidence 999999999999999999999999999987654432 1111111 3345555432221111211111 111111111
Q ss_pred cCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEE
Q 009077 177 VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAI 256 (544)
Q Consensus 177 ~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~ 256 (544)
....++++++++|||||||.||+|.++|+++......... .+++.++|++++.+|++|..++...++.++..|+++
T Consensus 788 ~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~ 863 (1140)
T PRK06814 788 CNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA----RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKV 863 (1140)
T ss_pred CCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH----hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEE
Confidence 1357899999999999999999999999999887776654 345788999999999999999877888999999999
Q ss_pred EEccC-cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 257 LIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 257 v~~~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
++.+. .+...+.+.++++++|++..+|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.+ ++++++.||
T Consensus 864 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG 940 (1140)
T PRK06814 864 FLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYG 940 (1140)
T ss_pred EEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccc
Confidence 88764 56778889999999999999999999887763 234578999999999999999999999998 899999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCC
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEG 415 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 415 (544)
+||++.++... .+.....+++|+|+|++++++++.+ + .++.|||+++|++++.||++++.........+|
T Consensus 941 ~TE~~~~~~~~-----~~~~~~~~~vG~p~~g~~~~~~~~~-~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g 1010 (1140)
T PRK06814 941 VTETAPVIALN-----TPMHNKAGTVGRLLPGIEYRLEPVP-G----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADG 1010 (1140)
T ss_pred cccccceEEec-----CCCCCCCCcCCccCCCCeEEEeecC-C----CCCceEEEEeCCCcchhhcCCCCCCccccCCCC
Confidence 99998765432 1223346789999999999998742 1 357799999999999999987653322223689
Q ss_pred ceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHH
Q 009077 416 WLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITED 495 (544)
Q Consensus 416 ~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 495 (544)
||+|||++++++||++++.||.||+||.+|++|+|.+||+.+.+++.+.+++|++++++..++.+++++. +.+.+.+
T Consensus 1011 ~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~~~~~~ 1087 (1140)
T PRK06814 1011 WYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT---ASDATRA 1087 (1140)
T ss_pred eEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CCCcCHH
Confidence 9999999999999999999999999999999999999999999999999999999998888888776654 3446778
Q ss_pred HHHHHHHhc-ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhc
Q 009077 496 EIKQYISKQ-VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAG 540 (544)
Q Consensus 496 ~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 540 (544)
++.+++++. ++.+++|..+++++++|+|++||++|++|+++..+.
T Consensus 1088 ~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 1133 (1140)
T PRK06814 1088 AFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEA 1133 (1140)
T ss_pred HHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 999999864 999999999999999999999999999999887653
No 107
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.8e-62 Score=597.70 Aligned_cols=488 Identities=25% Similarity=0.388 Sum_probs=418.3
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhC
Q 009077 22 PNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIG 101 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 101 (544)
+...++.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|.++|+++|++|+++++++++++++++|++++|
T Consensus 1128 ~~~~~l~~~~~~~a~~~p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG 1205 (4334)
T PRK05691 1128 PAQAWLPELLNEQARQTPERIALVWD--GGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAG 1205 (4334)
T ss_pred CccCCHHHHHHHHHHhCCCCeEEEEC--CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 33468999999999999999999987 7899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCC
Q 009077 102 ATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181 (544)
Q Consensus 102 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (544)
++++|++|.++.+++.++++.++++++|++......+... .....+.++.... .......+.....+
T Consensus 1206 ~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 1272 (4334)
T PRK05691 1206 GAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA---EGVSAIALDSLHL----------DSWPSQAPGLHLHG 1272 (4334)
T ss_pred CEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc---cCceEEeeccccc----------cccCCCCCCCCCCC
Confidence 9999999999999999999999999999988765443221 1122222221100 00011112234567
Q ss_pred CCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-
Q 009077 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ- 260 (544)
Q Consensus 182 ~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~- 260 (544)
+++++++|||||||.||+|.++|+++.+.+.+... .+++.++++++...|+++..++ ..++.++..|+++++.+
T Consensus 1273 ~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~s~-~~~~~~L~~G~~l~i~~~ 1347 (4334)
T PRK05691 1273 DNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQA----TYALDDSDVLMQKAPISFDVSV-WECFWPLITGCRLVLAGP 1347 (4334)
T ss_pred CCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHH----hcCCCCCCEEEEeCCccHHHHH-HHHHHHHhCCCEEEEcCc
Confidence 99999999999999999999999999988877655 4458899999999999998887 67889999999999975
Q ss_pred --CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccc
Q 009077 261 --KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTE 338 (544)
Q Consensus 261 --~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE 338 (544)
..++..+++.++++++|++.++|+++..+.+... ...++++|.+++|||++++++.+.+.+.+++++++|.||+||
T Consensus 1348 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 1425 (4334)
T PRK05691 1348 GEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTE 1425 (4334)
T ss_pred cccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcCh
Confidence 3689999999999999999999999999986543 234689999999999999999999999998899999999999
Q ss_pred cCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC------
Q 009077 339 AGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID------ 412 (544)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~------ 412 (544)
++..++.... ........++|+|++++.++|+| +.+++++.|..|||+|+|+++++||+++++.+...|.
T Consensus 1426 ~~~~~~~~~~---~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~ 1501 (4334)
T PRK05691 1426 TAINVTHWQC---QAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGE 1501 (4334)
T ss_pred heeeeeeeec---ccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCC
Confidence 9865543211 11223456899999999999999 5689999999999999999999999999999988773
Q ss_pred -CCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCC
Q 009077 413 -KEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSK 491 (544)
Q Consensus 413 -~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 491 (544)
..+||+|||++++++||.+++.||+|++||++|.+|++.+||..|.++|+|.+++|+...+ ..+..++++++...+..
T Consensus 1502 ~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~-~~~~~lva~~~~~~~~~ 1580 (4334)
T PRK05691 1502 DGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREG-AAGAQLVGYYTGEAGQE 1580 (4334)
T ss_pred CCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeC-CCCCEEEEEEEeCCCCC
Confidence 2359999999999999999999999999999999999999999999999999999986554 34578899988877767
Q ss_pred CCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 492 ITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 492 ~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
...++++++++.+||.|++|..++.++.||+|++||++|++|++.
T Consensus 1581 ~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1581 AEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred CCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 778899999999999999999999999999999999999999754
No 108
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.6e-61 Score=490.16 Aligned_cols=453 Identities=23% Similarity=0.332 Sum_probs=383.7
Q ss_pred CHHHHH-HhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeE
Q 009077 26 PLHTYC-FENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATS 104 (544)
Q Consensus 26 ~~~~~l-~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 104 (544)
++.+++ .++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLN--DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 444555 4557899999999875 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCE
Q 009077 105 TTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDV 184 (544)
Q Consensus 105 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (544)
+|+++..+.+.+..+++..++++++++++... +... ...... ...........++++
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~------~~~~~~----------------~~~~~~~~~~~~~~~ 137 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL------TSLHLQ----------------LVEGAHAVAWQPQRL 137 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc------cccccc----------------cccccCcccCCCCCe
Confidence 99999999999999999999999998776432 1110 000000 000111234567899
Q ss_pred EEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCH
Q 009077 185 VALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDI 264 (544)
Q Consensus 185 ~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~ 264 (544)
++++|||||||.||+|.++|+++...+..... .++..++++++..+|++|.+|+ ..++.++..|+++++.+.
T Consensus 138 a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~--- 209 (458)
T PRK09029 138 ATMTLTSGSTGLPKAAVHTAQAHLASAEGVLS----LMPFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK--- 209 (458)
T ss_pred EEEEECCCCCCCCCEEEEeHHHHHHHHHHHhh----cCCCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh---
Confidence 99999999999999999999999988776655 3457889999999999999998 566778999999998764
Q ss_pred HHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCcccc
Q 009077 265 VKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLS 344 (544)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~ 344 (544)
..+++.+ .+++.+..+|+++..++..... ..++|.+++||+++++++.+.+.+. +.++++.||+||++....
T Consensus 210 ~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~ 281 (458)
T PRK09029 210 QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVC 281 (458)
T ss_pred HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCccee
Confidence 4566666 3789999999999998876543 3479999999999999999998764 899999999999986443
Q ss_pred ccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEE
Q 009077 345 MCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGY 424 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~ 424 (544)
.. . .....+.|.|++++.+++++ |||+++|+.+..||+++++.+... ..++||+|||+|+
T Consensus 282 ~~-----~--~~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~-~~~~~~~TGD~~~ 341 (458)
T PRK09029 282 AK-----R--ADGLAGVGSPLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLV-NDEGWFATRDRGE 341 (458)
T ss_pred cc-----C--CCCCCCCCCCCCCCEEEEeC------------CEEEEecCceeeeeecCccccccc-cCCCccCCCCcEE
Confidence 21 1 11234689999999999976 899999999999999887776543 3689999999999
Q ss_pred EcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhc
Q 009077 425 IDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQ 504 (544)
Q Consensus 425 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 504 (544)
++ +|++++.||++|+|+.+|.+|+|.+||+.|.++|+|.+++|++.+++..++.+++++++.. ..+.++++++++++
T Consensus 342 ~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--~~~~~~l~~~~~~~ 418 (458)
T PRK09029 342 WQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDS--EAAVVNLAEWLQDK 418 (458)
T ss_pred Ee-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCc--ccCHHHHHHHHHhh
Confidence 99 9999999999999999999999999999999999999999999999888899999988763 46778999999999
Q ss_pred ccCCCcccEEEEecCCCCCCCcccchHHHHhHHhhccc
Q 009077 505 VVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAAGDL 542 (544)
Q Consensus 505 l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 542 (544)
++.|++|..+.+++.+|+|.+||++|+.|++++.+..-
T Consensus 419 l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~ 456 (458)
T PRK09029 419 LARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLG 456 (458)
T ss_pred chhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccC
Confidence 99999999999999999999999999999999987543
No 109
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=6.6e-61 Score=471.46 Aligned_cols=507 Identities=27% Similarity=0.393 Sum_probs=409.1
Q ss_pred CCCCCCHHHHHHhhhccCCCccEEEeCC-----C-CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 009077 21 IPNHLPLHTYCFENISQFADRPCIINGP-----T-GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAF 94 (544)
Q Consensus 21 ~~~~~~~~~~l~~~a~~~p~~~a~~~~~-----~-~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 94 (544)
..+..|+.+.+.+.+..+|+.+++.... . -..+||+|.++++.+++..|+.+|+++++.|+|+.-|++||+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 3467899999999999999999996543 1 278999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEe-cchhHHHHHHHhhc---CcEE-EEeCCCC-------C----C
Q 009077 95 LGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ-AVYNDKVRDLSEHH---GARI-VTIDPPP-------E----N 158 (544)
Q Consensus 95 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~~---~~~~-v~~~~~~-------~----~ 158 (544)
.||...|.+.||+..+++++.+.+++++++..++|++ +.....+.+..... ..+. |.++... . .
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~ 230 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVE 230 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeE
Confidence 9999999999999999999999999999999999999 55666666655532 3444 4445432 1 2
Q ss_pred CccHHHHHhhccCCCCCc-cCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHH---hhhcCCCCccCCCCeEEEEec
Q 009077 159 CLHFSELITQADENEIPA-VKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQ---QVDGENPNLYLHKEDVILCVL 234 (544)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 234 (544)
..+|+++...+......+ .+..|++.+.|+|||||||.||||.+||+|+...+.. ...... .......|+.++.+
T Consensus 231 v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~-~~~~~~~dv~lSyL 309 (691)
T KOG1256|consen 231 VYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAEN-AKATVGDDVYLSYL 309 (691)
T ss_pred EEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhccc-ccccccCceEEEeC
Confidence 678999987776555555 5788999999999999999999999999999886543 222111 12234479999999
Q ss_pred chhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcC---------------------
Q 009077 235 PLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG--------------------- 293 (544)
Q Consensus 235 p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~--------------------- 293 (544)
|+.|++..+...+ .+..|+.+.+.. -|+..+.+.++..+||++.++|.+|.++.+..
T Consensus 310 PLAHi~er~~~~~-~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~ 387 (691)
T KOG1256|consen 310 PLAHIFERVVELY-TFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAY 387 (691)
T ss_pred cHHHHHHHHHHHh-HhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 9999999855544 447888888876 48888888899999999999999998775400
Q ss_pred -----CCCCCCC-------------------CCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccc
Q 009077 294 -----DVDKYDM-------------------SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAF 349 (544)
Q Consensus 294 -----~~~~~~l-------------------~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~ 349 (544)
...+... ..+|.+++|++|+++++...++..+ +++|.+.||+|||.+.++..
T Consensus 388 k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~--- 463 (691)
T KOG1256|consen 388 KLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLT--- 463 (691)
T ss_pred HHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEec---
Confidence 0001000 2688999999999999999999998 89999999999999555432
Q ss_pred cCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCC
Q 009077 350 AKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDD 429 (544)
Q Consensus 350 ~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g 429 (544)
.+.+...+++|.|+|+++++++|..+-.-...+..|||+|+|++++.||+++++.|.+.++.+||++|||+|+++++|
T Consensus 464 --~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G 541 (691)
T KOG1256|consen 464 --LPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNG 541 (691)
T ss_pred --cCCCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCc
Confidence 233347899999999999999997665555666789999999999999999999999999999999999999999999
Q ss_pred cEEEEccccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCC--------CH------
Q 009077 430 ELFIVDRLKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKI--------TE------ 494 (544)
Q Consensus 430 ~l~~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--------~~------ 494 (544)
++.+.||++++||. .|++|.|+.||++..+.+-|.+.+|.+ +.....++++|++++.... ..
T Consensus 542 ~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g---~s~~~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc 618 (691)
T KOG1256|consen 542 TLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLG---DSLRSFLVAIVVPDPEVLKSWAAKDGVKGTFEELC 618 (691)
T ss_pred cEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEEC---CcchhcEEEEEecChhhchhhHHHccCchhHHHHh
Confidence 99999999999999 899999999999999999999988887 4455788999998654211 10
Q ss_pred ------HHHHHHH-----HhcccCCCcccEEEEe------cCCCCCCCcccchHHHHhHHhh
Q 009077 495 ------DEIKQYI-----SKQVVFYKRINRVFFT------DSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 495 ------~~l~~~l-----~~~l~~~~~p~~~~~~------~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
+.+...+ +..+..+.....+.+. +.=-.|||-|++|..+.++|++
T Consensus 619 ~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~ 680 (691)
T KOG1256|consen 619 RNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKK 680 (691)
T ss_pred cChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHH
Confidence 1111111 1224456666666664 3334588999999999999976
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-60 Score=501.06 Aligned_cols=502 Identities=20% Similarity=0.320 Sum_probs=385.2
Q ss_pred CCHHHHHHhhhccCCCccEEEeCC-------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 009077 25 LPLHTYCFENISQFADRPCIINGP-------TGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (544)
|++.++|+++++.+|+++|+++.+ ..+.+||+||.+++.++|++|.++| ++||+|+++++|+++++++++||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 478899999999999999998642 1278999999999999999999999 68999999999999999999999
Q ss_pred HhhCCeEeecCC---CCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc----CcEEEEeCCCCCCCccHHHHHhhcc
Q 009077 98 SYIGATSTTANP---FYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH----GARIVTIDPPPENCLHFSELITQAD 170 (544)
Q Consensus 98 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~ 170 (544)
+++|++++|+++ .++.+++.++++.++++++++++.....+....... ...++.++.. ++ ..
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~-- 148 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL--------DL-DS-- 148 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc--------cc-cc--
Confidence 999999999997 456789999999999999999988766655432211 1112222110 00 00
Q ss_pred CCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCc--cCCCCeEEEEecchhhHHhhHHHHHH
Q 009077 171 ENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL--YLHKEDVILCVLPLFHIYSLNSVLLC 248 (544)
Q Consensus 171 ~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~ 248 (544)
..........++++++++|||||||.||+|.++|.++...+......+.... ....++++++.+|++|..|++..++.
T Consensus 149 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~ 228 (578)
T PRK05850 149 PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCA 228 (578)
T ss_pred CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHH
Confidence 0011122346789999999999999999999999999877655433211000 13567899999999999999888999
Q ss_pred HHHhCcEEEEccCc----CHHHHHHHHHhccceeccCcHHHHHHH-HhcCC---CCCCCCCCceEEEEecccCCHHHHHH
Q 009077 249 ALRVGAAILIMQKF----DIVKLMELVQKYKVTVAPFVPPIVLAV-AKSGD---VDKYDMSSIRTVMSGAAPMGKELEDA 320 (544)
Q Consensus 249 ~l~~g~~~v~~~~~----~~~~~~~~i~~~~~t~l~~~P~~l~~l-~~~~~---~~~~~l~~l~~~~~~G~~l~~~~~~~ 320 (544)
++..|+++++.... ++..+++.+.++++++. .+|.++..+ ..... .....++++|.+++||+++++++.++
T Consensus 229 ~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~ 307 (578)
T PRK05850 229 PILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKR 307 (578)
T ss_pred HHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHH
Confidence 99999999987642 68899999999999865 566654433 32211 12335678999999999999999999
Q ss_pred HHHHCC-----CCceeccccccccCccccccccccCCC------C--------------ccCCCeeeeccCCceEEEEcC
Q 009077 321 VRAKLP-----HAKLGQGYGMTEAGPVLSMCLAFAKEP------F--------------EIKSGACGTVVRNAEMKIVDP 375 (544)
Q Consensus 321 ~~~~~~-----~~~v~~~yG~tE~~~~~~~~~~~~~~~------~--------------~~~~~~~g~p~~~~~~~i~d~ 375 (544)
+.+.|+ +..+++.||+||++..+.......... . .....++|.|. +.+++++|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~ 386 (578)
T PRK05850 308 FADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDP 386 (578)
T ss_pred HHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcC
Confidence 998873 357899999999875443211000000 0 00112345553 578999997
Q ss_pred CCCCCCCCCCceeEEEecCcccccccCChhhhhhhcC-----------CCCceecCceEEEcCCCcEEEEccccceEEeC
Q 009077 376 DTGISLPRNQAGEICIRGAQIMKGYLNDREATETTID-----------KEGWLHTGDIGYIDDDDELFIVDRLKELIKFK 444 (544)
Q Consensus 376 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~ 444 (544)
+++.+++.|+.|||+++|++++.||+++++.+...|. .++||+|||+|+++ +|++++.||.+|+|+++
T Consensus 387 ~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 387 DTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEEC
Confidence 7788999999999999999999999999999887773 25799999999997 89999999999999999
Q ss_pred ceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCH------HHHHHHHHhcccC--CCcccEEEE
Q 009077 445 GFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITE------DEIKQYISKQVVF--YKRINRVFF 516 (544)
Q Consensus 445 G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~------~~l~~~l~~~l~~--~~~p~~~~~ 516 (544)
|++|+|.+||++|.+++.+ +++|++++++ .++.+++++++.++...+. ..+++++...+.. ...|..+.+
T Consensus 466 G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~ 543 (578)
T PRK05850 466 GRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVL 543 (578)
T ss_pred CeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEEE
Confidence 9999999999999999985 5788888876 6788899988876543332 3556665554543 224555666
Q ss_pred ec--CCCCCCCcccchHHHHhHHhhcccC
Q 009077 517 TD--SIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 517 ~~--~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
++ .||+|++||++|++|+++|.++.+.
T Consensus 544 ~~~~~iP~t~~GKi~R~~l~~~~~~~~~~ 572 (578)
T PRK05850 544 VAPGSIPITTSGKIRRAACVEQYRQDEFT 572 (578)
T ss_pred eCCCCcCCCCCchHHHHHHHHHHHcCCcc
Confidence 64 8999999999999999999998875
No 111
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.5e-60 Score=488.68 Aligned_cols=445 Identities=20% Similarity=0.234 Sum_probs=346.5
Q ss_pred cCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch------hHHHHHHHhhcCcEEEEeCC-CC
Q 009077 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY------NDKVRDLSEHHGARIVTIDP-PP 156 (544)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~v~~~~-~~ 156 (544)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+..+......+.+++.. ..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 12222222211223333321 10
Q ss_pred -------CCCccHHHHHhhccC------CCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCcc
Q 009077 157 -------ENCLHFSELITQADE------NEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY 223 (544)
Q Consensus 157 -------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~ 223 (544)
.....+++++..... .........++++++++|||||||.||+|.+||.++......... .++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~ 156 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWA----HMD 156 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHH----hcC
Confidence 122356665421110 011112235689999999999999999999999998765544333 345
Q ss_pred CCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceeccCcHHHHHHHHhcCC--CCCCCC
Q 009077 224 LHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDM 300 (544)
Q Consensus 224 ~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~l 300 (544)
+.++|++++.+|++|..++ ..++.++..|+++++.+. +++..+++.++++++|++.++|+++..|++... ....++
T Consensus 157 ~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~ 235 (499)
T PLN03051 157 IQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDW 235 (499)
T ss_pred CCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCc
Confidence 7889999999999999887 567889999999998874 688999999999999999999999999987643 234467
Q ss_pred CCceEEEEecccCCHHHHHHHHHHCC-CCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCC
Q 009077 301 SSIRTVMSGAAPMGKELEDAVRAKLP-HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGI 379 (544)
Q Consensus 301 ~~l~~~~~~G~~l~~~~~~~~~~~~~-~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 379 (544)
+++|.++++|+++++++.+++++.++ ++.+++.||+||++....... .......+++|.|.++++++|+| ++++
T Consensus 236 ~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~----~~~~~~~~~~G~p~~~~~~~ivd-~~g~ 310 (499)
T PLN03051 236 SKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISST----LLQPQAPGAFSTASLGTRFVLLN-DNGV 310 (499)
T ss_pred hhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccc----ccCCCCCccccCCCCCceEEEEC-CCCC
Confidence 89999999999999999988777431 478999999999874332211 11122456899999999999999 5788
Q ss_pred CCCCC--CceeEEEecCcc--cccccCChhhhhhhcCC--------CCceecCceEEEcCCCcEEEEccccceEEeCcee
Q 009077 380 SLPRN--QAGEICIRGAQI--MKGYLNDREATETTIDK--------EGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQ 447 (544)
Q Consensus 380 ~~~~g--~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~--------~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~ 447 (544)
+++.| +.|||+++|+.+ +.||++++. +...++. .+||+|||+|++++||++++.||.+|+||++|++
T Consensus 311 ~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~ 389 (499)
T PLN03051 311 PYPDDQPCVGEVALAPPMLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIK 389 (499)
T ss_pred CCCCCCCcceEEEEecCcCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEE
Confidence 88887 579999999976 579997642 2211211 2379999999999999999999999999999999
Q ss_pred eCcHHHHHHHHc-CCCcceeEEEeeeCCCCC-ceEEEEE---EecCCC-CCCHHHHHHHH----HhcccCCCcccEEEEe
Q 009077 448 VAPAELEAMLIA-HPNISDAAVVPMKDEAAG-EVPVAFV---VRSNGS-KITEDEIKQYI----SKQVVFYKRINRVFFT 517 (544)
Q Consensus 448 v~~~~ie~~l~~-~~~v~~~~v~~~~~~~~~-~~~~~~v---~~~~~~-~~~~~~l~~~l----~~~l~~~~~p~~~~~~ 517 (544)
|+|.+||++|.+ +|.|.+++|++++++..+ +.++++| ++.++. ..+.+++++++ +.+++.+..|..++++
T Consensus 390 v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v 469 (499)
T PLN03051 390 TSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIV 469 (499)
T ss_pred CCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEc
Confidence 999999999986 999999999999998888 6788888 776654 45667777665 4557666666679999
Q ss_pred cCCCCCCCcccchHHHHhHHhh
Q 009077 518 DSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 518 ~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
++||+|++||++|++|++.+.+
T Consensus 470 ~~lP~t~~GKi~r~~L~~~~~~ 491 (499)
T PLN03051 470 PELPRNASNKLLRRVLRDQLKK 491 (499)
T ss_pred CCCCCCCCccHHHHHHHHHHHH
Confidence 9999999999999999987754
No 112
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-59 Score=443.81 Aligned_cols=499 Identities=22% Similarity=0.345 Sum_probs=415.2
Q ss_pred CCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 24 HLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 24 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
..|+.+.+.++++++|+++|+++.+.++++||+|+.++++++|+.|..+|++.||.|+++|+|.++++..+|+++++|++
T Consensus 76 ~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~ 155 (649)
T KOG1179|consen 76 RRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVI 155 (649)
T ss_pred CCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCce
Confidence 37999999999999999999999877799999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc---CcEEEEeCC--CCCCCccHHHHHhhccCCCCC---
Q 009077 104 STTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH---GARIVTIDP--PPENCLHFSELITQADENEIP--- 175 (544)
Q Consensus 104 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~--- 175 (544)
...||.++..+.+.|.++.++++++|++++..+.+.++.+.. .......+. ..+...++...+......+.|
T Consensus 156 tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~vp~~~ 235 (649)
T KOG1179|consen 156 TAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPVPVST 235 (649)
T ss_pred eeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCCCccc
Confidence 999999999999999999999999999999998888775444 233333322 122233443333333333323
Q ss_pred ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 176 ~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
....+-.++++++|||||||.||+.+++|..+...+..+.. .++++++|+++..+|++|+.|.+..+..++..|++
T Consensus 236 ~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~----~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT 311 (649)
T KOG1179|consen 236 RSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYY----VFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGAT 311 (649)
T ss_pred CCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHH----HhCCCccceEEEcchhHHHHHHHHHHHHHHhcCce
Confidence 22355678999999999999999999999999877764444 56799999999999999999999999999999999
Q ss_pred EEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 256 ILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
+|+..+|+..++|+.+.+|++|++...--+.+.|+..+....+.-.++|+. -|..+.++.|+.|.++|+..+|.+.||
T Consensus 312 ~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla--~GNGLR~diW~~Fv~RFg~~~IgE~Yg 389 (649)
T KOG1179|consen 312 VVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLA--YGNGLRPDIWQQFVKRFGIIKIGEFYG 389 (649)
T ss_pred EEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEE--ecCCCCchHHHHHHHHcCCCeEEEEec
Confidence 999999999999999999999999999999999999887766655566654 467899999999999996677999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeec------cCCceEEEEcCCCCC----------CCCCCCceeEEEe--cCcc-
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTV------VRNAEMKIVDPDTGI----------SLPRNQAGEICIR--GAQI- 396 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p------~~~~~~~i~d~~~~~----------~~~~g~~Gel~v~--~~~~- 396 (544)
+||...-... .....+.+|.- +--++.--+|++++. +|+.||.|.++-+ ....
T Consensus 390 aTEgn~~~~N--------~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~ 461 (649)
T KOG1179|consen 390 ATEGNSNLVN--------YDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPL 461 (649)
T ss_pred cccCcceeee--------ecCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCch
Confidence 9998743221 12333333331 112233334555553 4688999977532 3333
Q ss_pred --cccccCChhhhhhhc------CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEE
Q 009077 397 --MKGYLNDREATETTI------DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAV 468 (544)
Q Consensus 397 --~~gy~~~~~~~~~~~------~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 468 (544)
+.||.++...+.++. .+|-||.|||+-.+|+.|++||..|.+|.+...|++|+..|+|..|..+.++.|+.|
T Consensus 462 ~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~V 541 (649)
T KOG1179|consen 462 RSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNV 541 (649)
T ss_pred hhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeE
Confidence 789999776666553 577799999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCC-CceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhH
Q 009077 469 VPMKDEAA-GEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 469 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 536 (544)
+++.-+.. |..-+|.|+..+..+.+.+.+-++++..||+|.+|.++.+++++++|.|-|..+..|++.
T Consensus 542 YGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 542 YGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred EEEecCCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 99987654 455588888889999999999999999999999999999999999999999999998865
No 113
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=7.8e-59 Score=471.62 Aligned_cols=436 Identities=29% Similarity=0.461 Sum_probs=366.9
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecc
Q 009077 54 TYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (544)
Q Consensus 54 Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 133 (544)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+.+.++++..+++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHH
Q 009077 134 YNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQ 213 (544)
Q Consensus 134 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~ 213 (544)
..... .. ...+.++................+++++++|||||||.||+|.++|.++...+..
T Consensus 81 ~~~~~--------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~ 142 (436)
T TIGR01923 81 LEEKD--------FQ----------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVG 142 (436)
T ss_pred ccccc--------ee----------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHH
Confidence 42110 00 0011121111111111123355689999999999999999999999999888776
Q ss_pred hhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcC
Q 009077 214 QVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG 293 (544)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 293 (544)
... .+++.++|+++...|++|.+++ ..++.++..|+++++.+.+ ..+++.++++++|++.++|+++..+++..
T Consensus 143 ~~~----~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~ 215 (436)
T TIGR01923 143 SKE----NLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEG 215 (436)
T ss_pred HHh----hcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCc
Confidence 665 4468899999999999999888 5788999999999998755 38999999999999999999999998875
Q ss_pred CCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEE
Q 009077 294 DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIV 373 (544)
Q Consensus 294 ~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 373 (544)
... +++|.++++|+++++++.+.+++ + ++.+++.||+||++.....+.. ..... ..+.|.|++++++++.
T Consensus 216 ~~~----~~l~~~~~~G~~~~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~---~~~~~-~~~~G~~~~~~~~~i~ 285 (436)
T TIGR01923 216 GHN----ENLRKILLGGSAIPAPLIEEAQQ-Y-GLPIYLSYGMTETCSQVTTATP---EMLHA-RPDVGRPLAGREIKIK 285 (436)
T ss_pred CCC----CceEEEEECCCCCCHHHHHHHHH-h-CCceeeEecCCccchhccCcCc---ccccc-ccCCCccCCCcEEEEE
Confidence 422 68999999999999999998876 4 8999999999999865543311 11111 1248999999999984
Q ss_pred cCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHH
Q 009077 374 DPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAEL 453 (544)
Q Consensus 374 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 453 (544)
+.+. ++.|||+++|+.++.||++++..+...+ .++||+|||+++++++|++++.||.+|+|+.+|.++++.+|
T Consensus 286 ~~~~------~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~i 358 (436)
T TIGR01923 286 VDNK------EGHGEIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEI 358 (436)
T ss_pred eCCC------CCceEEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHH
Confidence 3222 2679999999999999999777765544 67999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHH
Q 009077 454 EAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDL 533 (544)
Q Consensus 454 e~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 533 (544)
|+.|.+++.|.+++|++.++...+..+++++++.+ ..+.+++.+++++.++.+++|..++++++||+|++||++|++|
T Consensus 359 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 359 ETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSES--DISQAKLIAYLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred HHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECC--CCCHHHHHHHHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 99999999999999999887777788888888764 3677899999999999999999999999999999999999865
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-58 Score=479.16 Aligned_cols=493 Identities=24% Similarity=0.339 Sum_probs=385.0
Q ss_pred CHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEe
Q 009077 26 PLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (544)
Q Consensus 26 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (544)
++.+++...+..+|+.+++...+.++.+||.||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 58888999999999999998877778999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHH-------HHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccC
Q 009077 106 TANPFYTPPEI-------AKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178 (544)
Q Consensus 106 ~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (544)
++++..+..++ ..+++.++++.+++++.......... ..... ...++++..... .....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~----------~~~~~~l~~~~~---~~~~~ 148 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLE-EKGIR----------VLTVADLLAADP---IDPVE 148 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhc-ccCCc----------eeehhhhcccCC---CCcCC
Confidence 99988775444 45677789999999876544332211 11111 234444432211 12234
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCC-eEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKE-DVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
..++++++++|||||||.||+|.++|.++...+...... +++.++ |++++.+|++|..+++..+..++..|++++
T Consensus 149 ~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 224 (545)
T PRK07768 149 TGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVA----AEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELV 224 (545)
T ss_pred CCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHh----cCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEE
Confidence 567999999999999999999999999998877665542 345665 899999999999999777888999999988
Q ss_pred EccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcC----CCCCCCCCCceEEEEecccCCHHHHHHHHHH---C-
Q 009077 258 IMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG----DVDKYDMSSIRTVMSGAAPMGKELEDAVRAK---L- 325 (544)
Q Consensus 258 ~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~----~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~---~- 325 (544)
+... .++..+++.+++++++++...|..+..+.+.. ......++++|.++.+|+++++++.+.+.+. |
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g 304 (545)
T PRK07768 225 KVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFG 304 (545)
T ss_pred EeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcC
Confidence 8754 26778899999999999877777666555432 1113557899999999999999999999874 4
Q ss_pred -CCCceeccccccccCccccccccccC---------------------CCCccCCCeeeeccCCceEEEEcCCCCCCCCC
Q 009077 326 -PHAKLGQGYGMTEAGPVLSMCLAFAK---------------------EPFEIKSGACGTVVRNAEMKIVDPDTGISLPR 383 (544)
Q Consensus 326 -~~~~v~~~yG~tE~~~~~~~~~~~~~---------------------~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 383 (544)
+...+++.||+||++..++....... ........++|+|+++++++++| +++.+++.
T Consensus 305 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~ 383 (545)
T PRK07768 305 LRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPP 383 (545)
T ss_pred CCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCC
Confidence 22359999999999865543211100 00012345789999999999999 56789999
Q ss_pred CCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCc
Q 009077 384 NQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNI 463 (544)
Q Consensus 384 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v 463 (544)
|+.|||+++|+.++.||++...... ..+.++||+|||+++++++|++++.||++|+|+.+|.++++.+||..|.++|+|
T Consensus 384 g~~Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v 462 (545)
T PRK07768 384 RGVGVIELRGESVTPGYLTMDGFIP-AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGV 462 (545)
T ss_pred CCEEEEEEccCcccccccCCCCCcc-cccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCccc
Confidence 9999999999999999998654433 334678999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeee--CCCCCceEEEEEEecCCCC-CCHHHHHHHHHhcccCC--CcccEEEEec--CCCCCCCcccchHHHHhH
Q 009077 464 SDAAVVPMK--DEAAGEVPVAFVVRSNGSK-ITEDEIKQYISKQVVFY--KRINRVFFTD--SIPKAPSGKILRKDLRTK 536 (544)
Q Consensus 464 ~~~~v~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l~~~l~~~--~~p~~~~~~~--~lP~t~~GK~~r~~l~~~ 536 (544)
.+++|+++. +...++..++++....... ....++.++++..+..+ ..|..+.+++ .||+|++||++|+.|+++
T Consensus 463 ~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~ 542 (545)
T PRK07768 463 RPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAEL 542 (545)
T ss_pred ccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHh
Confidence 998887664 3333445554444432211 12235666777665543 5788888886 899999999999999998
Q ss_pred Hh
Q 009077 537 LA 538 (544)
Q Consensus 537 ~~ 538 (544)
|+
T Consensus 543 ~~ 544 (545)
T PRK07768 543 VT 544 (545)
T ss_pred cC
Confidence 86
No 115
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-57 Score=457.52 Aligned_cols=407 Identities=20% Similarity=0.260 Sum_probs=354.4
Q ss_pred EEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhc
Q 009077 44 IINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIAS 123 (544)
Q Consensus 44 ~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 123 (544)
+++. ++.+||+||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+.+..+++.+
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~ 78 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRA 78 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhC
Confidence 4555 689999999999999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhc
Q 009077 124 KAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLT 203 (544)
Q Consensus 124 ~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t 203 (544)
+++.+++++.... . .. .....++++++++|||||||.||+|.++
T Consensus 79 ~~~~~i~~~~~~~---------------~--------------~~-------~~~~~~~~~~~i~~TSGtTG~PKgv~~s 122 (414)
T PRK08308 79 GCHGLLYGESDFT---------------K--------------LE-------AVNYLAEEPSLLQYSSGTTGEPKLIRRS 122 (414)
T ss_pred CCCEEEecCcccc---------------c--------------cc-------CCCCCCCCceEEEECCCCCCCCcEEEEe
Confidence 9999998763110 0 00 0123568999999999999999999999
Q ss_pred hHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcH
Q 009077 204 HKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 204 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
|+++...+..... .+....+++.+...|++|.+|++..++.++..|+++++.+..++..+++.+++++++++.++|
T Consensus 123 ~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P 198 (414)
T PRK08308 123 WTEIDREIEAYNE----ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVP 198 (414)
T ss_pred hHhHHHHHHHHHH----hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCH
Confidence 9999887776655 334678899999999999999988899999999999999889999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeee
Q 009077 284 PIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGT 363 (544)
Q Consensus 284 ~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (544)
.++..+.+.... ...++.++++|+++++++.+++++. ..++++.||+||++.+.... ......++|+
T Consensus 199 ~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~-------~~~~~~~~G~ 265 (414)
T PRK08308 199 LMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP-------DMKSHLDLGN 265 (414)
T ss_pred HHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC-------CCCCCCccCc
Confidence 999999876532 1367889999999999999999987 57899999999998543211 1224567899
Q ss_pred ccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccccceEEe
Q 009077 364 VVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKF 443 (544)
Q Consensus 364 p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~ 443 (544)
|+|++++++.+. .++.||+++++ .++||+|||+++++++|++++.||.+|+|+.
T Consensus 266 p~~~~~~~~~~~-------~~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~ 319 (414)
T PRK08308 266 PLPHVSVSAGSD-------ENAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINV 319 (414)
T ss_pred cCCCeEEEEecC-------CCCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEE
Confidence 999999998752 25679999964 3579999999999999999999999999999
Q ss_pred CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCC
Q 009077 444 KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKA 523 (544)
Q Consensus 444 ~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t 523 (544)
+|++|+|.+||+++.++++|.+++|++.+++..++.++++++... ..+.++++++++++++.+++|..++++++||+|
T Consensus 320 ~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t 397 (414)
T PRK08308 320 SGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHE--EIDPVQLREWCIQHLAPYQVPHEIESVTEIPKN 397 (414)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCC--CCCHHHHHHHHHHhCccccCCcEEEEeccCCCC
Confidence 999999999999999999999999999998888888888888653 577889999999999999999999999999999
Q ss_pred CCcccchHHHH
Q 009077 524 PSGKILRKDLR 534 (544)
Q Consensus 524 ~~GK~~r~~l~ 534 (544)
++||++|+.|+
T Consensus 398 ~~GKi~r~~~~ 408 (414)
T PRK08308 398 ANGKVSRKLLE 408 (414)
T ss_pred CCcCeehhhhh
Confidence 99999999543
No 116
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-57 Score=428.61 Aligned_cols=511 Identities=24% Similarity=0.373 Sum_probs=414.6
Q ss_pred CCCCCCCCCCCHHHHHHhhhccCCCccEEEeCC-----------C----------CceeeHHHHHHHHHHHHHHHHHcCC
Q 009077 16 LPDIYIPNHLPLHTYCFENISQFADRPCIINGP-----------T----------GDVYTYADVELTSRKVAAGLSKLGV 74 (544)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~-----------~----------~~~~Ty~el~~~~~~la~~L~~~g~ 74 (544)
+.+.+.+.-.|+.+.+.+.++.+.++.++-+.+ + -..+||.|+++++.++|++|...|+
T Consensus 32 L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~ 111 (678)
T KOG1180|consen 32 LVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGL 111 (678)
T ss_pred ccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCC
Confidence 456677777899999999999999999884311 0 1579999999999999999999999
Q ss_pred CCCCE-EEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhc-CcE-EEE
Q 009077 75 QKGDV-IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHH-GAR-IVT 151 (544)
Q Consensus 75 ~~g~~-V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~-~v~ 151 (544)
+++++ ++|+++.+.+|+.+++||++-+..+|.+...+..+.+.|-|++++++.+|++.+..+.+....... .++ +|.
T Consensus 112 k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~ 191 (678)
T KOG1180|consen 112 KPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIY 191 (678)
T ss_pred CCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEE
Confidence 98776 999999999999999999999999999999999999999999999999999999998777665544 444 445
Q ss_pred eCCC---------------CCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhh
Q 009077 152 IDPP---------------PENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVD 216 (544)
Q Consensus 152 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~ 216 (544)
+++. .-..+++++++.-+.....++.+..|+|+++|+|||||||.||||+++|.|+.+.+.....
T Consensus 192 ~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~ 271 (678)
T KOG1180|consen 192 FDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGE 271 (678)
T ss_pred ecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcc
Confidence 5531 1235678888776666656666668999999999999999999999999999998887765
Q ss_pred cCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHH--------HHHHHHhccceeccCcHHHHHH
Q 009077 217 GENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVK--------LMELVQKYKVTVAPFVPPIVLA 288 (544)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~--------~~~~i~~~~~t~l~~~P~~l~~ 288 (544)
.. ..+.+.|+++..+|+.|++.+ ..-+.++.-|+.+-..+..+..+ .-..+...+||++.++|.++.+
T Consensus 272 ~v---~~lg~~D~yi~yLPLAHIlEl-~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~dr 347 (678)
T KOG1180|consen 272 NV---PELGPKDRYIAYLPLAHILEL-TAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDR 347 (678)
T ss_pred cC---cccCCCceEEEechHHHHHHH-HHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHH
Confidence 33 268999999999999999998 55677888888887765432222 2234567899999999999987
Q ss_pred HHhcC--------------------------CCCCC----------------CCCCceEEEEecccCCHHHHHHHHHHCC
Q 009077 289 VAKSG--------------------------DVDKY----------------DMSSIRTVMSGAAPMGKELEDAVRAKLP 326 (544)
Q Consensus 289 l~~~~--------------------------~~~~~----------------~l~~l~~~~~~G~~l~~~~~~~~~~~~~ 326 (544)
+.+.- +.... .--++|.+++||++++++..+.+...+
T Consensus 348 VrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~- 426 (678)
T KOG1180|consen 348 VRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF- 426 (678)
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-
Confidence 75410 00000 012789999999999999999999998
Q ss_pred CCceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCC--CceeEEEecCcccccccCCh
Q 009077 327 HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRN--QAGEICIRGAQIMKGYLNDR 404 (544)
Q Consensus 327 ~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~ 404 (544)
.|++.+.||.||+++.++.. +..+...+.+|.|++.++++++|-+++.=.+.+ ..|||+++|++++.||++++
T Consensus 427 C~Pv~qGYGLTEtca~~tv~-----e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ 501 (678)
T KOG1180|consen 427 CCPVLQGYGLTETCAAATVL-----EPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNE 501 (678)
T ss_pred cccccccccccchhcccEec-----ChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCCh
Confidence 88999999999999777664 556667789999999999999997555433333 47999999999999999999
Q ss_pred hhhhhhcCC-CC--ceecCceEEEcCCCcEEEEccccceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceE
Q 009077 405 EATETTIDK-EG--WLHTGDIGYIDDDDELFIVDRLKELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVP 480 (544)
Q Consensus 405 ~~~~~~~~~-~~--~~~TgDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~ 480 (544)
+.+...|.. +| ||+|||+|.+.+||++.+..|+.|.+|. +|+.|.+..+|+++...|.|.+.||++- .....+
T Consensus 502 ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd---~~~s~~ 578 (678)
T KOG1180|consen 502 EKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYAD---SNKSKP 578 (678)
T ss_pred hhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEecc---ccccee
Confidence 999999866 78 9999999999999999999999999999 9999999999999999999999999983 445688
Q ss_pred EEEEEecCCCC--------CCH---------HHHHHHH---------HhcccCCCcccEEEEecCC--CC----CCCccc
Q 009077 481 VAFVVRSNGSK--------ITE---------DEIKQYI---------SKQVVFYKRINRVFFTDSI--PK----APSGKI 528 (544)
Q Consensus 481 ~~~v~~~~~~~--------~~~---------~~l~~~l---------~~~l~~~~~p~~~~~~~~l--P~----t~~GK~ 528 (544)
+++||++++.- +.. .++.+.+ +..|..+.+|..|++.+.- |- |+.-|+
T Consensus 579 VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KL 658 (678)
T KOG1180|consen 579 VAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALKL 658 (678)
T ss_pred EEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHHh
Confidence 99999986511 111 1122222 4457788899988887531 32 456799
Q ss_pred chHHHHhHHhh
Q 009077 529 LRKDLRTKLAA 539 (544)
Q Consensus 529 ~r~~l~~~~~~ 539 (544)
.|+.+++.|.+
T Consensus 659 KRk~I~~~~k~ 669 (678)
T KOG1180|consen 659 KRKEILAAYKK 669 (678)
T ss_pred hHHHHHHHHHH
Confidence 99999988865
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=4.9e-57 Score=455.69 Aligned_cols=402 Identities=35% Similarity=0.535 Sum_probs=326.2
Q ss_pred HHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC
Q 009077 31 CFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF 110 (544)
Q Consensus 31 l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 110 (544)
|+++|+++||++|+++ +.++.+||+||+++++++|..|.++|+++|++|+++++|+++++++++||+++|++++|++|.
T Consensus 1 f~~~a~~~pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~ 79 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPS 79 (417)
T ss_dssp HHHHHHHSTTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETT
T ss_pred ChhHHhhCCCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccc
Confidence 5789999999999999 448999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEE----ecchhHHHHHHHhhc--CcEEEEeCCCCCCCccHHHHHhhccCCCCCccC-CCCCC
Q 009077 111 YTPPEIAKQAIASKAKIIIT----QAVYNDKVRDLSEHH--GARIVTIDPPPENCLHFSELITQADENEIPAVK-INPDD 183 (544)
Q Consensus 111 ~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 183 (544)
++.+++.++++.++++++|+ +......+....... ...++.++............ ........ .. ..+++
T Consensus 80 ~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~ 156 (417)
T PF00501_consen 80 LSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKS--ASLSDEPQ-SPEDSPDD 156 (417)
T ss_dssp SSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHH--HHHCHCSH-STTHTTTS
T ss_pred cccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccccccccccc--cccccccc-cCCCCccc
Confidence 99999999999999999997 222222233333221 23345555333221111111 00000000 00 05799
Q ss_pred EEEEecCCCCCCCCchhhhchHHHHHHHHHhh-hcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCc
Q 009077 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQV-DGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKF 262 (544)
Q Consensus 184 ~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~ 262 (544)
+++++|||||||.||+|.++|+++...+.... .. ..+++ |++++.+|++|.+|++..++.++..|+++++.+..
T Consensus 157 ~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~---~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 231 (417)
T PF00501_consen 157 PAFILFTSGTTGKPKGVVLTHRNLLAQARALALPE---YFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPF 231 (417)
T ss_dssp EEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHH---TTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSH
T ss_pred eeEeecccccccccccccccccccccccccccccc---ccccC--ceEEeeccccccccccccccccccccccccccccc
Confidence 99999999999999999999999988877653 11 11222 59999999999999988999999999999998875
Q ss_pred C---HHHHHHHHHhccceeccCcHHHHHHHHhcCCCC----CCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 263 D---IVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD----KYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 263 ~---~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~----~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
. ++.+++.++++++|++.++|+++..+++..+.. ...++++|.++++|+++++++.+++++.++..++++.||
T Consensus 232 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 311 (417)
T PF00501_consen 232 DLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYG 311 (417)
T ss_dssp HHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEE
T ss_pred cccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceeccc
Confidence 4 467899999999999999999999999833222 346788999999999999999999999995559999999
Q ss_pred ccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCC
Q 009077 336 MTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEG 415 (544)
Q Consensus 336 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 415 (544)
+||++.+++... ........+++|.|+|+++++|+|++++++++.|+.|||+++|+.++.||+++++.+...|..+|
T Consensus 312 ~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~ 388 (417)
T PF00501_consen 312 STETGSIATIRP---PEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDG 388 (417)
T ss_dssp EGGGSSEEEEEE---TTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTS
T ss_pred ccccceeeeccc---ccccccccccccccccccccccccccccccccccccccccccCCccceeeecccccccccccccc
Confidence 999998876432 12233466789999999999999987799999999999999999999999999999998886668
Q ss_pred ceecCceEEEcCCCcEEEEccccceEEeC
Q 009077 416 WLHTGDIGYIDDDDELFIVDRLKELIKFK 444 (544)
Q Consensus 416 ~~~TgDl~~~~~~g~l~~~GR~~d~i~~~ 444 (544)
||+|||+|+++++|++++.||.||+||++
T Consensus 389 ~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 389 WYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred ceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 99999999999999999999999999974
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.3e-51 Score=413.37 Aligned_cols=395 Identities=27% Similarity=0.404 Sum_probs=329.5
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEec
Q 009077 54 TYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (544)
Q Consensus 54 Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 132 (544)
||.||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+.+.++++.++++.+++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHH
Q 009077 133 VYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVA 212 (544)
Q Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~ 212 (544)
.....+.... ...+.+... +..................++++++++|||||||.||+|.++|+++.....
T Consensus 81 ~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~ 150 (408)
T TIGR01733 81 ALASRLAGLV----LPIILVDPL------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLA 150 (408)
T ss_pred chhhhccccC----CceEEechh------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHH
Confidence 7655443221 112222110 000000110111111124578999999999999999999999999998887
Q ss_pred HhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcC---HHHHHHHHHhccceeccCcHHHHHHH
Q 009077 213 QQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD---IVKLMELVQKYKVTVAPFVPPIVLAV 289 (544)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~---~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (544)
.... .+.+.+++++++..|++|..++ ..++.++..|+++++.+... +..+.+.++++++|.+.++|.++..+
T Consensus 151 ~~~~----~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l 225 (408)
T TIGR01733 151 WLAR----RYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALL 225 (408)
T ss_pred HHHH----hcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHH
Confidence 7765 3457789999999999999887 67889999999999877643 68899999999999999999999999
Q ss_pred HhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCcc-CCCeeeeccCCc
Q 009077 290 AKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEI-KSGACGTVVRNA 368 (544)
Q Consensus 290 ~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~-~~~~~g~p~~~~ 368 (544)
.+... ..++++|.++++|+++++++++.+.+.++++.+++.||+||++.++..... ....... ...++|.|++++
T Consensus 226 ~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~~~~~~~G~~~~~~ 301 (408)
T TIGR01733 226 AAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLV-DADDAPRESPVPIGRPLANT 301 (408)
T ss_pred HHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEc-CccccCCccccccCcccCCc
Confidence 98765 457899999999999999999999999966999999999999977653211 1111111 267899999999
Q ss_pred eEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCC------C--ceecCceEEEcCCCcEEEEccccce
Q 009077 369 EMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKE------G--WLHTGDIGYIDDDDELFIVDRLKEL 440 (544)
Q Consensus 369 ~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~--~~~TgDl~~~~~~g~l~~~GR~~d~ 440 (544)
+++|+|++ +.+++.|+.|||+++|+.++.||+++++.+...+..+ + ||+|||+++++++|++++.||.+|+
T Consensus 302 ~~~i~~~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~ 380 (408)
T TIGR01733 302 RLYVLDDD-LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQ 380 (408)
T ss_pred eEEEECCC-CCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCE
Confidence 99999965 8899999999999999999999999988887766332 2 9999999999999999999999999
Q ss_pred EEeCceeeCcHHHHHHHHcCCCcceeEE
Q 009077 441 IKFKGFQVAPAELEAMLIAHPNISDAAV 468 (544)
Q Consensus 441 i~~~G~~v~~~~ie~~l~~~~~v~~~~v 468 (544)
|+.+|++++|.+||+.|..++.|.+++|
T Consensus 381 i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 381 VKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred EEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 9999999999999999999999998764
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.3e-46 Score=369.11 Aligned_cols=321 Identities=27% Similarity=0.411 Sum_probs=276.7
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..++++++++|||||||.||+|.++|.++.......... +...++.+..+|++|..++ ..++.++..|+++++
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~------~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~ 104 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR------LGGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVE 104 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc------cCCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEe
Confidence 446899999999999999999999999998877655432 2345678899999999998 566778888888877
Q ss_pred ---ccCcCHHHHHHHHHhcc--ceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecc
Q 009077 259 ---MQKFDIVKLMELVQKYK--VTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQG 333 (544)
Q Consensus 259 ---~~~~~~~~~~~~i~~~~--~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~ 333 (544)
...+++..+++.+++++ .++...+|..+..++..... ...+.+++.++++|+++++++.+.+.+ + ++++++.
T Consensus 105 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~-~-~~~v~~~ 181 (358)
T PRK07824 105 LDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAA-A-GINVVRT 181 (358)
T ss_pred cCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHh-c-CCcEEec
Confidence 34578999999999998 45566788888777665432 235789999999999999999999886 4 8999999
Q ss_pred ccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCC
Q 009077 334 YGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDK 413 (544)
Q Consensus 334 yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 413 (544)
||+||++..+. ..|.|++++++++.+ |||+++|+.++.||++++... .+..
T Consensus 182 YG~TE~~~~~~---------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~ 232 (358)
T PRK07824 182 YGMSETSGGCV---------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAE 232 (358)
T ss_pred ccCCccCCCcC---------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccC
Confidence 99999874321 248899999999843 899999999999999887643 3446
Q ss_pred CCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCC
Q 009077 414 EGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKIT 493 (544)
Q Consensus 414 ~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 493 (544)
++||+|||++++ ++|.+++.||.+|+|+.+|++|+|.+||+.|.++|+|.+++|++.+++..++.++++++...+....
T Consensus 233 ~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~ 311 (358)
T PRK07824 233 PGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPT 311 (358)
T ss_pred CCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcC
Confidence 789999999999 8999999999999999999999999999999999999999999999988889999999887766788
Q ss_pred HHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHhh
Q 009077 494 EDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 494 ~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 539 (544)
.+++++++++.++.+++|..++++++||+|++||++|++|+++|.+
T Consensus 312 ~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 312 LEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred HHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 8999999999999999999999999999999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.3e-44 Score=395.39 Aligned_cols=469 Identities=14% Similarity=0.132 Sum_probs=346.9
Q ss_pred CCCCCHHHHHHhhhccCCCccEEEeC-CCC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 009077 22 PNHLPLHTYCFENISQFADRPCIING-PTG--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAS 98 (544)
Q Consensus 22 ~~~~~~~~~l~~~a~~~p~~~a~~~~-~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 98 (544)
|+..|+.+++.+.++++|+++|+... ..+ +++||+|+.++++++|++|.+.|+++||+|+|+++|+++|+++.+||+
T Consensus 424 ~~~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~ 503 (1452)
T PTZ00297 424 AGVRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACA 503 (1452)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 34479999999999999999999742 112 689999999999999999999999999999999999999999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCC---C---------CCCccHHHHH
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP---P---------ENCLHFSELI 166 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~---~---------~~~~~~~~~~ 166 (544)
++|+++||+++ +..++.+++++++++++|++.+....+.+........+++++.. . ....+|++++
T Consensus 504 ~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll 581 (1452)
T PTZ00297 504 LYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVE 581 (1452)
T ss_pred HcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHH
Confidence 99999999986 46789999999999999999887777665543323455666431 0 0135688886
Q ss_pred hhccCCCC-CccCCCCCCEEEEec---CCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhh
Q 009077 167 TQADENEI-PAVKINPDDVVALPY---SSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242 (544)
Q Consensus 167 ~~~~~~~~-~~~~~~~~~~~~i~~---TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 242 (544)
..+..... .....++++++.++| ||||||.||||.+||+++...+........ .....++|++++.+|++|.++.
T Consensus 582 ~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~-~~~~~~~D~~Ls~LPLaHI~er 660 (1452)
T PTZ00297 582 QKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGV-LPSSFKKHLMVHFTPFAMLFNR 660 (1452)
T ss_pred hcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhcc-ccCCCCCCEEEEechHHHHHHH
Confidence 65432111 123347889998885 999999999999999999988877543211 1134678999999999999986
Q ss_pred HHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCC-------------------------C
Q 009077 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD-------------------------K 297 (544)
Q Consensus 243 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~-------------------------~ 297 (544)
...+.++..|+++.. +++..+++.+++++||++.++|.++..+.+..... +
T Consensus 661 -~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g 736 (1452)
T PTZ00297 661 -VFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIH 736 (1452)
T ss_pred -HHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC
Confidence 556778899999864 47899999999999999999999998765421000 0
Q ss_pred CC----------------C-CCceEEEEecc--cCCHHHHHHHHHHCCCCceeccccccccCccccccccccCCCCccCC
Q 009077 298 YD----------------M-SSIRTVMSGAA--PMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKS 358 (544)
Q Consensus 298 ~~----------------l-~~l~~~~~~G~--~l~~~~~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 358 (544)
.. + .++|.+++||. +++..+ .. ++++...||.||.. +.. ......
T Consensus 737 ~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l-----~~--~i~i~~g~glTE~~---~~~-----~~~~~~- 800 (1452)
T PTZ00297 737 RRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL-----LE--HISVCYVPCLREVF---FLP-----SEGVFC- 800 (1452)
T ss_pred CCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH-----hC--CceEEEecceEEee---eec-----CCCCcc-
Confidence 00 0 35778888863 444322 22 56688899999953 111 111111
Q ss_pred CeeeeccCCceEEEEcC-CCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEccc
Q 009077 359 GACGTVVRNAEMKIVDP-DTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRL 437 (544)
Q Consensus 359 ~~~g~p~~~~~~~i~d~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~GR~ 437 (544)
..|.|+|+++++|.+. +.+. .+..|||++++ .++++.|... .++|+ +||+|+|.||+
T Consensus 801 -~~G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr~-------~kdpe~T~e~--~~gW~---------~dG~L~IidRk 858 (1452)
T PTZ00297 801 -VDGTPAPSLQVDLEPFDEPSD---GAGIGQLVLAK-------KGEPRRTLPI--AAQWK---------RDRTLRLLGPP 858 (1452)
T ss_pred -cCCeecCceEEEEcccccccC---CCCCCeEEEEE-------CCChHHHHHh--hCcCc---------cCCeEEEEecc
Confidence 2399999999999873 2222 13459999954 4677777653 24664 68999999999
Q ss_pred cceEEe-CceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCC-------------------CCHHH-
Q 009077 438 KELIKF-KGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSK-------------------ITEDE- 496 (544)
Q Consensus 438 ~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-------------------~~~~~- 496 (544)
+|.||. +|++|.|..||+.+..+|.|.+++|++-.. ..++|+|++++..- .+.++
T Consensus 859 Kdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~----k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el 934 (1452)
T PTZ00297 859 LGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPS----RPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTEL 934 (1452)
T ss_pred ccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCC----CceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHH
Confidence 999999 999999999999999999999999997433 23788888763211 02222
Q ss_pred -------HHHHH---H--hcccCCCcccEEEEec-CC-----CCCCCcccchHHHHhHHhh
Q 009077 497 -------IKQYI---S--KQVVFYKRINRVFFTD-SI-----PKAPSGKILRKDLRTKLAA 539 (544)
Q Consensus 497 -------l~~~l---~--~~l~~~~~p~~~~~~~-~l-----P~t~~GK~~r~~l~~~~~~ 539 (544)
+.+.+ . +.+..+++++.+.+++ .+ -+|++.|+.|..+.++|.+
T Consensus 935 ~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~ 995 (1452)
T PTZ00297 935 VAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSS 995 (1452)
T ss_pred HHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHH
Confidence 22222 1 1245677887776653 33 4799999999999999875
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.9e-40 Score=347.88 Aligned_cols=417 Identities=24% Similarity=0.337 Sum_probs=341.4
Q ss_pred CCCCCCCCCHHHHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 009077 18 DIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (544)
Q Consensus 18 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (544)
....|...++...+.+++...|++.|+.+. +.++||+|+..+++++|+.|.+.|++++++|+++++++++++++++|+
T Consensus 220 ~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~--~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~i 297 (642)
T COG1020 220 AAPIPLRLTIHLLFEEQAATTPDAVALVRG--GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAV 297 (642)
T ss_pred ccCCCccchHHHHHHHHHHhCCCceeEecC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHH
Confidence 444555578999999999999999999987 789999999999999999999999999999999998899999999999
Q ss_pred HhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCcc
Q 009077 98 SYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAV 177 (544)
Q Consensus 98 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (544)
+++|..++|++|.++.+++.++++..+++.+++........... .. +.++ +.............
T Consensus 298 lkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~----~~--~~~~----------~~~~~~~~~~~~~~ 361 (642)
T COG1020 298 LKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL----PG--LALD----------DALSEIPDTDPIPQ 361 (642)
T ss_pred HhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccC----Cc--cccc----------cccccCCccCcccc
Confidence 99999999999999999999999999999999983322211000 00 1111 00000000000123
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
...+++.++++|||||||.||+|..+|+++.....+... .+.+...|+++...++....+. ..++.++..|++++
T Consensus 362 ~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~----~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~ 436 (642)
T COG1020 362 ALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGA----RFGLDADDRVLALASLSFDASV-FEIFGALLEGARLV 436 (642)
T ss_pred cCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHH----hcCCCcccEEeecCCcccchhH-HHHHHHHhCCCEEE
Confidence 445689999999999999999999999999886665554 3568888999999888666665 78899999999999
Q ss_pred EccC---cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCC--CCCCCceEEEEecccCCHHHHHHHHHHCC-CCcee
Q 009077 258 IMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK--YDMSSIRTVMSGAAPMGKELEDAVRAKLP-HAKLG 331 (544)
Q Consensus 258 ~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~--~~l~~l~~~~~~G~~l~~~~~~~~~~~~~-~~~v~ 331 (544)
+.+. .++..+.+.+.++++|++..+|..+..++....... .....++.+++||+.++.++...+....+ ...++
T Consensus 437 ~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~ 516 (642)
T COG1020 437 LAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLL 516 (642)
T ss_pred ecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEe
Confidence 9874 588999999999999999999999999887632221 22235899999999999999999888764 57899
Q ss_pred ccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhc
Q 009077 332 QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTI 411 (544)
Q Consensus 332 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 411 (544)
+.||.||+.............. . ...+|.|+++..+.++| +..++++.|..||+++.|.++.+||+++++.+...|
T Consensus 517 ~~ygpTe~~~~~~~~~~~~~~~--~-~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f 592 (642)
T COG1020 517 NLYGPTEATLDAPSFPISAELE--S-RVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERF 592 (642)
T ss_pred eccCccHHhhheeeEEcccccC--C-CCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHh
Confidence 9999999554333322111111 1 57899999999999999 688999999999999999999999999999999998
Q ss_pred CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCC
Q 009077 412 DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHP 461 (544)
Q Consensus 412 ~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~ 461 (544)
..+.+|+|||++++.++|.+.++||.|+++|.+|.++.+.+||..+.++|
T Consensus 593 ~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 593 IALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 55469999999999999999999999999999999999999999988764
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=2.5e-38 Score=309.53 Aligned_cols=288 Identities=21% Similarity=0.220 Sum_probs=231.9
Q ss_pred CCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccC--CCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYL--HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 182 ~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
+..++++|||||||.||+|.++|+++...+...... +++ .+.+++++.+|++|.+|+...++.++..|+++++.
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~ 170 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKI----LGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQL 170 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHH----hCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEec
Confidence 557889999999999999999999998877766542 233 33468999999999999877788899999999998
Q ss_pred cCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccccccc
Q 009077 260 QKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEA 339 (544)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~ 339 (544)
..+++..+++.++.+ +++.++|+++..+.+.. ..+++++. +++|+++++++++.+.+. +...+++.||+||+
T Consensus 171 ~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt 242 (386)
T TIGR02372 171 AAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATET 242 (386)
T ss_pred CCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccc
Confidence 888888888888654 78899999999997753 23566665 688999999999999885 23579999999999
Q ss_pred CccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceec
Q 009077 340 GPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHT 419 (544)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 419 (544)
+.+++.. .....+.|.|++++.+ + ++. + .| +..|++|
T Consensus 243 ~~i~~~~----------~~~~~~~~~p~~~~~~-~--~~~--------~---~g-------------------~~~~~~t 279 (386)
T TIGR02372 243 GGIGLRE----------APDDPFRLLPDLACFA-D--TLS--------S---AG-------------------LARRLDL 279 (386)
T ss_pred ccccccc----------CCCCCcccCCCccccC-C--Ccc--------C---CC-------------------ccceeec
Confidence 8754421 1123456777766533 1 110 0 01 1236899
Q ss_pred CceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCC--HHHH
Q 009077 420 GDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKIT--EDEI 497 (544)
Q Consensus 420 gDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l 497 (544)
||+++++++|++++.||+||+|+++|++|+|.+||+.|.++|+|.+++|.. .++.+.++|++.++...+ .+++
T Consensus 280 gD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~~~~l 354 (386)
T TIGR02372 280 QDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAELEIEL 354 (386)
T ss_pred CceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999998862 356788888887654333 4689
Q ss_pred HHHHHhcccCCCcccEEEEecCCCCCCCcccc
Q 009077 498 KQYISKQVVFYKRINRVFFTDSIPKAPSGKIL 529 (544)
Q Consensus 498 ~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~ 529 (544)
++++++.++.|++|..+.++++||+|++||++
T Consensus 355 ~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 355 RATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 99999999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=8.4e-38 Score=314.17 Aligned_cols=328 Identities=20% Similarity=0.229 Sum_probs=243.9
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..+++++.+++||||||.||++.++|.++..........+. .+++.++|++++..+..+..+.+...+.++..|++++.
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~-~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 150 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIR-AAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVP 150 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHH-HcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEe
Confidence 34567888999999999999999999998765443332221 34678899998877665544444456668888999988
Q ss_pred ccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCC--CCCceEEEEecccCCHHHHHHHHHHCCCCceeccccc
Q 009077 259 MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYD--MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (544)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~--l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~ 336 (544)
.+..+++.+++.|++++++++.++|+++..|++.....+.. ..++|.++++||++++++++.+++.| ++++++.||+
T Consensus 151 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~ 229 (422)
T TIGR02155 151 ISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGL 229 (422)
T ss_pred cCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccc
Confidence 77778899999999999999999999999998765433322 35899999999999999999999999 7999999999
Q ss_pred cccCc--cccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCC
Q 009077 337 TEAGP--VLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKE 414 (544)
Q Consensus 337 tE~~~--~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 414 (544)
||+++ ++..|. ....+ ...+.+++.++|+|++++.++++|+.|||++++.. ...+ +.
T Consensus 230 tE~~~~~~~~~~~-------~~~~g-~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~------------~~~~-p~ 288 (422)
T TIGR02155 230 SEVIGPGVAMECV-------ETQDG-LHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT------------KEAL-PV 288 (422)
T ss_pred hhhcCCceeeccc-------ccCCC-ceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC------------cccc-ce
Confidence 99852 222221 00111 11223467888999878999999999999998742 1223 67
Q ss_pred CceecCceEEEcCC-C-----cEEEEccccceEEeCceeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecC
Q 009077 415 GWLHTGDIGYIDDD-D-----ELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSN 488 (544)
Q Consensus 415 ~~~~TgDl~~~~~~-g-----~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 488 (544)
+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|.....+........+.+.+.++..+
T Consensus 289 ~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~ 368 (422)
T TIGR02155 289 IRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKP 368 (422)
T ss_pred eeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEec
Confidence 89999999999775 4 46899999999999999999999999999999998444444444444456666666654
Q ss_pred CCCC-----C----HHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchH
Q 009077 489 GSKI-----T----EDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRK 531 (544)
Q Consensus 489 ~~~~-----~----~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~ 531 (544)
+... + .++|.++++..+..+.. ..++.+++||+|+ ||++|.
T Consensus 369 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 369 ESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred CcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 3211 1 35677777777765532 2233447999988 999874
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=7.9e-31 Score=264.13 Aligned_cols=505 Identities=17% Similarity=0.222 Sum_probs=353.9
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCC----CceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHh
Q 009077 25 LPLHTYCFENISQFADRPCIINGPT----GDVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASY 99 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (544)
.++.++|+..++..||++|+..-+. +..+||.+|..+|.+++.+|...+ +++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 7899999999999999999975432 378999999999999999999864 79999999999999999999999999
Q ss_pred hCCeEeecCCCC------CHHHHHHHHHhcCceEEEEecchhHHHHHH--HhhcCcE----EEEeCCCCCCCccHHHHHh
Q 009077 100 IGATSTTANPFY------TPPEIAKQAIASKAKIIITQAVYNDKVRDL--SEHHGAR----IVTIDPPPENCLHFSELIT 167 (544)
Q Consensus 100 ~G~~~v~l~~~~------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~~~~~----~v~~~~~~~~~~~~~~~~~ 167 (544)
+|.+++|+.|.- +.+.+..+++.+++.+|+++......+++- ..+.... ++.++.... +|.....
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~---t~~k~~~ 926 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE---TIRKRKK 926 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch---hhhhhhh
Confidence 999999999843 236788999999999999998876655432 2221111 111111111 1111111
Q ss_pred hc--cCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHH
Q 009077 168 QA--DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSV 245 (544)
Q Consensus 168 ~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 245 (544)
+. .....++....++.++++-+.--++|.-.++.++|..+++.+..... .+.+.+..-++.+.+.+...|++..
T Consensus 927 ~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe----~~~l~~~rpl~~~~~~~sGlgf~~w 1002 (1363)
T KOG3628|consen 927 NIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKE----TCQLYKSRPLLGCSSPYSGLGFNHW 1002 (1363)
T ss_pred hhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHH----HHccccCCceEEEecCccchhHHHH
Confidence 11 11223344456788999988888899999999999999998887665 3346667777777777677788788
Q ss_pred HHHHHHhCcEEEEccC----cCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCc-----eEEEEec-ccCCH
Q 009077 246 LLCALRVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSI-----RTVMSGA-APMGK 315 (544)
Q Consensus 246 ~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l-----~~~~~~G-~~l~~ 315 (544)
++...+.|....+.++ .++..++..++++++.-++.+-..+..+.+........++.. ..+++-. +....
T Consensus 1003 cLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ 1082 (1363)
T KOG3628|consen 1003 CLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRI 1082 (1363)
T ss_pred HHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHH
Confidence 8888899988777654 478889999999999998888888877766554433333211 1233333 34444
Q ss_pred HHHHHHHHHCCCC-----ceeccccccccCcccccc-------------ccc---------cCCCCccCCCeeeeccCCc
Q 009077 316 ELEDAVRAKLPHA-----KLGQGYGMTEAGPVLSMC-------------LAF---------AKEPFEIKSGACGTVVRNA 368 (544)
Q Consensus 316 ~~~~~~~~~~~~~-----~v~~~yG~tE~~~~~~~~-------------~~~---------~~~~~~~~~~~~g~p~~~~ 368 (544)
.+.+-|.+.|... .+--.|++.=.-.++... ... ...+........|...+++
T Consensus 1083 ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~ 1162 (1363)
T KOG3628|consen 1083 ALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYT 1162 (1363)
T ss_pred HHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccc
Confidence 5556665555211 122233333222111110 000 0001111223457888999
Q ss_pred eEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhh-hc---------CCCCceecCceEEEcC------C----
Q 009077 369 EMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATET-TI---------DKEGWLHTGDIGYIDD------D---- 428 (544)
Q Consensus 369 ~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~-~~---------~~~~~~~TgDl~~~~~------~---- 428 (544)
++.|++|++..+|.+|+.||||+.|.+.+.+|+...+.... .+ ...+|-||||+|+... .
T Consensus 1163 ~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~ 1242 (1363)
T KOG3628|consen 1163 DIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERH 1242 (1363)
T ss_pred eeEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceee
Confidence 99999999999999999999999999999888754322211 11 3557999999999843 1
Q ss_pred CcEEEEccccceEEeCceeeCcHHHHHHHH-cCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHH-HHHhccc
Q 009077 429 DELFIVDRLKELIKFKGFQVAPAELEAMLI-AHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQ-YISKQVV 506 (544)
Q Consensus 429 g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~-~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~l~~~l~ 506 (544)
.-+|++|-.++.+.++|.+.+|.+||..+. .||.|.+|.|+... ..++.++++.. +.....|.- ..+..|.
T Consensus 1243 ~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~-----glvVvviE~~g--q~~~~~LvPlIv~~vL~ 1315 (1363)
T KOG3628|consen 1243 DLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT-----GLVVVVIECHG--QQELADLVPLIVNVVLE 1315 (1363)
T ss_pred eeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC-----CeEEEEEEecC--chhHhhhhHHHHHHHHh
Confidence 248999999999999999999999999776 57999999999533 34555555543 222223333 3345566
Q ss_pred CCCccc-EEEEec--CCCCCCCcccchHHHHhHHhhcccC
Q 009077 507 FYKRIN-RVFFTD--SIPKAPSGKILRKDLRTKLAAGDLR 543 (544)
Q Consensus 507 ~~~~p~-~~~~~~--~lP~t~~GK~~r~~l~~~~~~~~~~ 543 (544)
.+.++. .+.+++ .+|+++.|..+|..+++.|.+|+++
T Consensus 1316 eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~ 1355 (1363)
T KOG3628|consen 1316 EHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLD 1355 (1363)
T ss_pred hcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccc
Confidence 666665 444554 6999999999999999999999986
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-31 Score=278.56 Aligned_cols=494 Identities=19% Similarity=0.251 Sum_probs=323.1
Q ss_pred CHHHHHHhhhccCCCccEEEeCCC----C--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHh
Q 009077 26 PLHTYCFENISQFADRPCIINGPT----G--DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASY 99 (544)
Q Consensus 26 ~~~~~l~~~a~~~p~~~a~~~~~~----~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 99 (544)
++...+.+.+...|.+.+..+-.. + .++||++....++.+++.|...|..+|+.|+++|..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 556677777788887777653211 1 6799999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCC----HHHHHHHHHhc-CceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCC
Q 009077 100 IGATSTTANPFYT----PPEIAKQAIAS-KAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEI 174 (544)
Q Consensus 100 ~G~~~v~l~~~~~----~~~l~~~l~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (544)
.|..+++++|.++ .+.+..+.... ....-+..... +....-+...+.-.++.. ...+..+ .......
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~---i~~~~~~~~~~~~sv~~~---~~~f~~~--~~~~~~r 188 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLN---IIDILLNSLFPKLSVETI---ADSFQMV--LHNEDTR 188 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheeccceehhhhh---hHHHHhhccccccchhhc---cchhhhh--hccCCCc
Confidence 9999999999998 22222111110 00000110000 000000000000000000 0011111 0111111
Q ss_pred CccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecc-hhhHHhhHHHHHHHHHhC
Q 009077 175 PAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLP-LFHIYSLNSVLLCALRVG 253 (544)
Q Consensus 175 ~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~g~~~~~~~~l~~g 253 (544)
......++..+.+.||||+||.||++..+|..+.....+.... +..+..+.+ ...+ .+.....-....+.+..|
T Consensus 189 ~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~----f~~t~s~~~-~~~~~~~~~d~i~~~~~~~L~~~ 263 (1032)
T KOG1178|consen 189 EIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTT----FPPTGSDRF-TFKTSVYFDDTIQKFIGALLFNG 263 (1032)
T ss_pred ceeeecccccceEeecccccccccccchhHHHHHhhhhhcccc----CCcCccchh-hhhheeecccchHHHHhhHhhcC
Confidence 2234567889999999999999999999999998887776654 335555554 2222 111111113344555566
Q ss_pred cEEEEccCc---CHHHHHHHHHhccceeccCcHHHHHHHHhcCCCC-------------CCCCCCceEEEEecccCCHHH
Q 009077 254 AAILIMQKF---DIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVD-------------KYDMSSIRTVMSGAAPMGKEL 317 (544)
Q Consensus 254 ~~~v~~~~~---~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~-------------~~~l~~l~~~~~~G~~l~~~~ 317 (544)
+.+..+... .+.++...+++++++....+|+...+++...... ....++++....+|++....+
T Consensus 264 ~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l 343 (1032)
T KOG1178|consen 264 NNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSL 343 (1032)
T ss_pred ceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhh
Confidence 655555432 3688999999999999999999977776654331 111247899999999999999
Q ss_pred HHHHHHHCCCCceeccccccccCccccccccccCCCCccCCCeeeeccCCce-------EEEEcCCCCCCCCCCCceeEE
Q 009077 318 EDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAE-------MKIVDPDTGISLPRNQAGEIC 390 (544)
Q Consensus 318 ~~~~~~~~~~~~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~-------~~i~d~~~~~~~~~g~~Gel~ 390 (544)
...+...+...-...-|+.++........ .+.+.........+..+..... .++.. ..+.+.+.+..+...
T Consensus 344 ~~s~~~~~~~~~~~~~y~s~~~~~~~s~~-~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l 421 (1032)
T KOG1178|consen 344 YTSTFDLLAEIFFGLPYLSTDPTGLVSYD-DFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCL 421 (1032)
T ss_pred hhhhhhcccceeeeecccCCCCccceeHH-hhCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCcccceee
Confidence 98666655333333448888777555532 1222222222222222222211 11111 122222222222111
Q ss_pred ----EecCcccccccCChhhhhhhc-----CCCCceecCceEEEcCCCcEEEEccccceEEeCceeeCcHHHHHHHHcCC
Q 009077 391 ----IRGAQIMKGYLNDREATETTI-----DKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHP 461 (544)
Q Consensus 391 ----v~~~~~~~gy~~~~~~~~~~~-----~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~ 461 (544)
..+.++..|| ..++.....+ ..+.+|+|||.|+..++|.+.+.||.|++||.+|.++...+|+..+..+|
T Consensus 422 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p 500 (1032)
T KOG1178|consen 422 GAEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHP 500 (1032)
T ss_pred cccccccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCc
Confidence 1122333332 1122211111 35567999999999899999999999999999999999999999999999
Q ss_pred CcceeEEEeeeCCCCCceEEEEEEecCCCC-CCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHh
Q 009077 462 NISDAAVVPMKDEAAGEVPVAFVVRSNGSK-ITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRT 535 (544)
Q Consensus 462 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 535 (544)
.|.++.+....+..-++.+++|++...+.. .....+++++++.|+.|++|..++.++.+|+|++||+|+++|..
T Consensus 501 ~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 501 DVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLE 575 (1032)
T ss_pred chhhhheeeeeccccCceEEEEEeccCCCCchhHHHHHHhhcccccceecceEEEEhhhCCcCCCCCcChhhhhh
Confidence 999999999999888999999999875543 34578999999999999999999999999999999999999998
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=100.00 E-value=5e-31 Score=264.89 Aligned_cols=329 Identities=17% Similarity=0.148 Sum_probs=229.8
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
+..++++.+++||||||.||++.+||.++........+.+. ..++.++|+++...++.+..+.+....++...|++++.
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~-~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFV-SQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHH-HcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 45678899999999999999999999999776655443222 23678999999999888776665556677888888765
Q ss_pred ccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCC--CCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccc
Q 009077 259 MQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY--DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGM 336 (544)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~--~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~ 336 (544)
... ....++.+++++++++.++|+.+..|++.....+. ...++|.++++||++++++++.+++.| ++.+++.||+
T Consensus 162 ~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~ 238 (445)
T TIGR03335 162 EGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGS 238 (445)
T ss_pred CCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCCh
Confidence 432 34568899999999999999998888765443332 236899999999999999999999999 8999999999
Q ss_pred cccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCc
Q 009077 337 TEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGW 416 (544)
Q Consensus 337 tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 416 (544)
||++ ++..|.. ......+.+.+.++|+|++++.++++|+.|||++++-..... ... .+--.
T Consensus 239 TE~~-~~~~c~~---------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~~--------r~~-~PliR 299 (445)
T TIGR03335 239 TEGT-MCGECQA---------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPGE--------RCG-SLLIN 299 (445)
T ss_pred hhhh-heEEecC---------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCCc--------cCC-ceEEE
Confidence 9986 3333311 111223335688999998888889999999999977532100 000 14456
Q ss_pred eecCceEEEcC-CC--------cEEEEccccceEEeCceeeCcHHHHHHHHcC---CCcc-eeEEEeeeCCCCCceEEEE
Q 009077 417 LHTGDIGYIDD-DD--------ELFIVDRLKELIKFKGFQVAPAELEAMLIAH---PNIS-DAAVVPMKDEAAGEVPVAF 483 (544)
Q Consensus 417 ~~TgDl~~~~~-~g--------~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~---~~v~-~~~v~~~~~~~~~~~~~~~ 483 (544)
|+|||++++.. +. ++...||+||+++++|.+++|.+||++|.+. +++. +..++...+......+.+.
T Consensus 300 YrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 379 (445)
T TIGR03335 300 YDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRVS 379 (445)
T ss_pred eecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEEE
Confidence 99999999732 32 1445699999999999999999999999995 5553 4555543332223344444
Q ss_pred EEecCCCCCCHHHHHHHHHhc----ccC-------CCcccEEEEe--cCCCCC-CCcccch
Q 009077 484 VVRSNGSKITEDEIKQYISKQ----VVF-------YKRINRVFFT--DSIPKA-PSGKILR 530 (544)
Q Consensus 484 v~~~~~~~~~~~~l~~~l~~~----l~~-------~~~p~~~~~~--~~lP~t-~~GK~~r 530 (544)
+...++...+.+++.+.+... ++. ..+...+.++ ..||++ ..||..|
T Consensus 380 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 380 LECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred EEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 555443333444544444443 221 1112233333 579998 3699876
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.97 E-value=2.4e-29 Score=238.77 Aligned_cols=327 Identities=21% Similarity=0.260 Sum_probs=246.1
Q ss_pred CCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 178 ~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
.+..++...+..||||||.|+.+.+|+.++...+..+++.+. ..+...+|++.....+....|....-.++-..|++++
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~-~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vi 164 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLY-SAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVI 164 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHH-HccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEE
Confidence 345577788999999999999999999999888887777665 4578888988777664333333344556666777777
Q ss_pred EccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCC--CCCCCceEEEEecccCCHHHHHHHHHHCCCCceecccc
Q 009077 258 IMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDK--YDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYG 335 (544)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~--~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG 335 (544)
-...-+.+..+++++.++++++.++|+++..|++..+..+ ..-.++|.+++|+|++++++++.+.++| ++..++.||
T Consensus 165 p~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYG 243 (438)
T COG1541 165 PISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYG 243 (438)
T ss_pred ccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccc
Confidence 7666688999999999999999999999999999887764 3345889999999999999999999999 999999999
Q ss_pred ccccCccc-cccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCC
Q 009077 336 MTEAGPVL-SMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKE 414 (544)
Q Consensus 336 ~tE~~~~~-~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 414 (544)
+||..+.+ ..|.... ...-.-+...++++||+++..+++|+.|||+++.-. ...+ +-
T Consensus 244 ltE~~g~g~~eC~~~~---------glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~------------~~~~-Pl 301 (438)
T COG1541 244 LTEGFGPGAGECTERN---------GLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT------------KEGM-PL 301 (438)
T ss_pred cccccCCccccccccc---------CCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc------------ccCc-ce
Confidence 99997663 3332211 122233678999999999999999999999996542 1111 55
Q ss_pred CceecCceEEEcCCCc---------EEEEccccceEEeCceeeCcHHHHHHHHcCCCcc-eeEEEeeeCCCCCceEEEEE
Q 009077 415 GWLHTGDIGYIDDDDE---------LFIVDRLKELIKFKGFQVAPAELEAMLIAHPNIS-DAAVVPMKDEAAGEVPVAFV 484 (544)
Q Consensus 415 ~~~~TgDl~~~~~~g~---------l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v 484 (544)
-.|+|||+..+.++.+ -.+.||+||++.+.|.+|+|..||+.|.+.+++. +.+++... ....+.+.+.|
T Consensus 302 IRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~v 380 (438)
T COG1541 302 IRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRV 380 (438)
T ss_pred EEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEE
Confidence 5799999999976422 4599999999999999999999999999999998 88888766 45556667777
Q ss_pred EecCCCC--CCHHHHHHHHHhcccC---CCcccEEEEecCCCCCCCcccch
Q 009077 485 VRSNGSK--ITEDEIKQYISKQVVF---YKRINRVFFTDSIPKAPSGKILR 530 (544)
Q Consensus 485 ~~~~~~~--~~~~~l~~~l~~~l~~---~~~p~~~~~~~~lP~t~~GK~~r 530 (544)
++.+... .+..++.+.+.+.+-. ...-..++.+..+|||. ||..|
T Consensus 381 E~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 381 ELENEAEELEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred EecCcccchHHHHHHHHHHHHHHHhhcCCceEEEEEeccceeccc-CceeE
Confidence 7664311 1122222344333322 11222455557899996 56654
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=4.6e-26 Score=206.43 Aligned_cols=211 Identities=17% Similarity=0.148 Sum_probs=164.6
Q ss_pred HHhhhccCCCccEEEeC-C---CCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEe
Q 009077 31 CFENISQFADRPCIING-P---TGDVYTYADVELTSRKVAAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (544)
Q Consensus 31 l~~~a~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (544)
++..++.+|+++|+++. + ++.++||+||.++++++|+.|++ +|+++||+|+|+++|++++++++|||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 46778889999999753 2 23479999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEe-----CC-----CCCCCccHHHHHhhccCCCCC
Q 009077 106 TANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTI-----DP-----PPENCLHFSELITQADENEIP 175 (544)
Q Consensus 106 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~-----~~-----~~~~~~~~~~~~~~~~~~~~~ 175 (544)
|++ .+++++++++++....+.. . ...+.+ .. ......+|.+.+........+
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG----S-GEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGDQFAP 143 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc----C-CceEEEeccccccCCCCCCCCcccchhhhhhccCCCCCC
Confidence 996 5789999999887666431 1 122222 11 112234555543322122222
Q ss_pred ccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcE
Q 009077 176 AVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAA 255 (544)
Q Consensus 176 ~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~ 255 (544)
.....++|++.++||||+ +|.++.... . ..+++++|+++ .+|++|.+|+...++.++..|++
T Consensus 144 ~~~~~~~D~a~l~yTsg~---------~~~~~~~~~--~------~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t 205 (227)
T TIGR03089 144 YEPPDATAPALVAGGGEW---------TGAELVAAA--R------AAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGS 205 (227)
T ss_pred CCCCCCCcceeeeccccc---------cHHHHHHHH--h------hcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCce
Confidence 214567999999999986 566655443 1 34588999999 99999999998899999999999
Q ss_pred EEEccCcCHHHHHHHHHhccce
Q 009077 256 ILIMQKFDIVKLMELVQKYKVT 277 (544)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t 277 (544)
+++.+++++..+++.++++++|
T Consensus 206 ~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 206 LVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred EEEecCCCHHHHHHHHHhhcCC
Confidence 9999999999999999999986
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=1e-20 Score=181.13 Aligned_cols=117 Identities=23% Similarity=0.235 Sum_probs=109.6
Q ss_pred CCCceecCceEEE-cCCCcEEEEccccceEEeCc---eeeCcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecC
Q 009077 413 KEGWLHTGDIGYI-DDDDELFIVDRLKELIKFKG---FQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSN 488 (544)
Q Consensus 413 ~~~~~~TgDl~~~-~~~g~l~~~GR~~d~i~~~G---~~v~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 488 (544)
.+|||+|||+|++ |++|++++.||.+ +| ++|+|. ||++|.++|+|.+|+|++++++..++.++++|++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 7899999999998 6999999999997 77 799999 999999999999999999999999999999999763
Q ss_pred CCCCCHHHHHHHHHhcccCCCcccEEEEecCCCCCCCcccchHHHHhHHh
Q 009077 489 GSKITEDEIKQYISKQVVFYKRINRVFFTDSIPKAPSGKILRKDLRTKLA 538 (544)
Q Consensus 489 ~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 538 (544)
..+.++++++++.+|+. ++|.++.++++||+|++||++|++|++.+.
T Consensus 281 --~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~ 327 (365)
T PRK09188 281 --PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAM 327 (365)
T ss_pred --CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhh
Confidence 46788999999999999 999999999999999999999999998764
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.85 E-value=9e-20 Score=185.11 Aligned_cols=493 Identities=16% Similarity=0.215 Sum_probs=324.0
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCC---ceeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHH
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTG---DVYTYADVELTSRKVAA-GLSKLGVQKGDVIMLLLQNC--PQFVFAFLGAS 98 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~-~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~ 98 (544)
..+...+...-..++...|.++-+.. ..+||..+..++.++|+ .|.+-|+.++++|.++..-+ .++++..++|.
T Consensus 94 ~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~ 173 (1363)
T KOG3628|consen 94 TDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCF 173 (1363)
T ss_pred cchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhcccc
Confidence 34455555555677888888765432 67999999999999999 66667999999999997754 89999999999
Q ss_pred hhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhh---------c
Q 009077 99 YIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQ---------A 169 (544)
Q Consensus 99 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------~ 169 (544)
..|.+.+|+.+..+.+++...++....+++++.......+..... ..++...+.. .
T Consensus 174 l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~---------------~~s~~k~v~~w~t~~~k~~~ 238 (1363)
T KOG3628|consen 174 LLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNS---------------PVSLAKAVAWWKTNDFKGNY 238 (1363)
T ss_pred ccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccC---------------cccHHHHHHhhhccccccee
Confidence 999999999999999999999999999999988766554432210 0111111000 0
Q ss_pred cCCCCCccCCCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHh-----------hhcC-----CCCccCCCCeEEEEe
Q 009077 170 DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQ-----------VDGE-----NPNLYLHKEDVILCV 233 (544)
Q Consensus 170 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~-----------~~~~-----~~~~~~~~~~~~~~~ 233 (544)
..+........-. ..+|-||.+++|.-.+++++|+ +..+.+.. ..++ ...+.....+.++..
T Consensus 239 ~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~ 316 (1363)
T KOG3628|consen 239 TKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTN 316 (1363)
T ss_pred ehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeec
Confidence 0011111112223 8889999999999999999998 54333321 1211 112345667788888
Q ss_pred cchhhHHhhHHHHHHHHHhCcEEEEccC---cCHHHHHHHHHhccceeccCcHHHHHHHHhcC-----------CCCCCC
Q 009077 234 LPLFHIYSLNSVLLCALRVGAAILIMQK---FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG-----------DVDKYD 299 (544)
Q Consensus 234 ~p~~~~~g~~~~~~~~l~~g~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-----------~~~~~~ 299 (544)
+......|++..++.++++|.+.+.+++ ..+..+.+++.+++++++..-...+....... +....+
T Consensus 317 ~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d 396 (1363)
T KOG3628|consen 317 LDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPD 396 (1363)
T ss_pred cCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCC
Confidence 8888888999999999999999999887 67888999999999999866544443332211 112245
Q ss_pred CCCceEEEEecccCCHHHHHHHHHHC----CCCceeccc-----------------cccccCccccccccccCCC-----
Q 009077 300 MSSIRTVMSGAAPMGKELEDAVRAKL----PHAKLGQGY-----------------GMTEAGPVLSMCLAFAKEP----- 353 (544)
Q Consensus 300 l~~l~~~~~~G~~l~~~~~~~~~~~~----~~~~v~~~y-----------------G~tE~~~~~~~~~~~~~~~----- 353 (544)
++++|.+++.-+.+..+..+....+| +...+-..| +++|.+......+......
T Consensus 397 ~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ 476 (1363)
T KOG3628|consen 397 LSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEG 476 (1363)
T ss_pred ccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccce
Confidence 78999999999999998887776665 111121222 2233332222111100000
Q ss_pred --------------------CccCCCeeeeccC-CceEEEEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhc-
Q 009077 354 --------------------FEIKSGACGTVVR-NAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTI- 411 (544)
Q Consensus 354 --------------------~~~~~~~~g~p~~-~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~- 411 (544)
........|...| ++.+.++++++.+.|..+++|||||.++.+...|+.-+..+...|
T Consensus 477 ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~ 556 (1363)
T KOG3628|consen 477 LLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFK 556 (1363)
T ss_pred eeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEE
Confidence 0001112333222 567778888899999999999999999999999997666665544
Q ss_pred -----------CCCCceecCceEEEcCCCcEEEEccccceE-EeCceeeCcHHH----------HHHHHcCCCcceeEEE
Q 009077 412 -----------DKEGWLHTGDIGYIDDDDELFIVDRLKELI-KFKGFQVAPAEL----------EAMLIAHPNISDAAVV 469 (544)
Q Consensus 412 -----------~~~~~~~TgDl~~~~~~g~l~~~GR~~d~i-~~~G~~v~~~~i----------e~~l~~~~~v~~~~v~ 469 (544)
....|.|||-+|++.+++ ++++|-.+|.+ ...|...+..+| +.+.+..+.|.++.++
T Consensus 557 ~~~~~s~~~~~~n~~FmRtGLlGFv~~gk-i~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf 635 (1363)
T KOG3628|consen 557 ATPVESSGKPPSNVPFMRTGLLGFVHNGK-IYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAF 635 (1363)
T ss_pred eeeccccCCCCccchhhhhcceeeeeCCe-EEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeee
Confidence 233479999999997666 55555445544 447777766554 3344556778888777
Q ss_pred eeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhc---ccC-CCccc-E--EEEecCCCCCCCcccchHHHHhHHhhccc
Q 009077 470 PMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQ---VVF-YKRIN-R--VFFTDSIPKAPSGKILRKDLRTKLAAGDL 542 (544)
Q Consensus 470 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~---l~~-~~~p~-~--~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 542 (544)
- .++.+..++..|.. .++.=.+++.+. +.. +++-. . ++.-+.||||+-|.+.-..+++.|..|.|
T Consensus 636 ~------~E~~~Vv~~esP~a--~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~G~L 707 (1363)
T KOG3628|consen 636 E------DEHIVVVVLESPDA--TEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLEGSL 707 (1363)
T ss_pred e------cceEEEEEEeCcch--hhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHHHHHcCCC
Confidence 4 34444444444332 222222222222 222 22222 2 33336899999888999999999999987
Q ss_pred C
Q 009077 543 R 543 (544)
Q Consensus 543 ~ 543 (544)
.
T Consensus 708 ~ 708 (1363)
T KOG3628|consen 708 P 708 (1363)
T ss_pred C
Confidence 5
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.80 E-value=9e-18 Score=164.79 Aligned_cols=245 Identities=16% Similarity=0.118 Sum_probs=162.5
Q ss_pred EEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecc-hhhHHhhHHHHHHHHHhCcE-EEEcc-
Q 009077 184 VVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLP-LFHIYSLNSVLLCALRVGAA-ILIMQ- 260 (544)
Q Consensus 184 ~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~g~~~~~~~~l~~g~~-~v~~~- 260 (544)
-..+..||||||.|-.+..+..............+. ..++..++++..... -.+.+ ..+..... +...+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~-~~g~~~g~r~a~~~~~~~~ly-------~~~~~~~~~~~~~~l 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVL-PDGLFAKHRIAFFLRADNNLY-------QSVNNRWISLDFFDL 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhC-ccccccCCcEEEEEccChhHH-------HHHHhccceeeecCC
Confidence 455678999999999999999877554443333222 123444444443321 11222 11222111 11111
Q ss_pred CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCHHHHHHHHHHCCCCceeccccccccC
Q 009077 261 KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAG 340 (544)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~~yG~tE~~ 340 (544)
..+.+..++.|++++|+++.++|+.+..|++.....+.. ..++.++++||.++++.++.+++.| ++++++.||+|| |
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g 249 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-G 249 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-h
Confidence 257889999999999999999999999999876554433 4789999999999999999999999 899999999999 6
Q ss_pred ccccccccccCCCCccCCCeeeeccCCceEE--EEcCCCCCCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCcee
Q 009077 341 PVLSMCLAFAKEPFEIKSGACGTVVRNAEMK--IVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLH 418 (544)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~--i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 418 (544)
.++..|.. +.+..--..+.++ ++|++ +. +..++++-. + .. .+--.|+
T Consensus 250 ~la~eC~~----------g~lHl~ed~~~vE~~ivD~~-~~-------~~~ViT~L~------n------~~-~PlIRYr 298 (430)
T TIGR02304 250 FLASTCRC----------GTLHLNEDLVHIEKQYLDEH-KR-------FVPIITDFT------R------TT-QPIVRYR 298 (430)
T ss_pred heEEecCC----------CCEEEccccEEEEeeEECCC-Cc-------eEEEEecCC------C------cc-ceEEeee
Confidence 55554411 1122222344555 78853 21 344554321 1 11 1445699
Q ss_pred cCceEEEcCCC----c----E-EEEccccceEEe---Ccee--eCcHHHHHHH-HcCCCcceeEEEe
Q 009077 419 TGDIGYIDDDD----E----L-FIVDRLKELIKF---KGFQ--VAPAELEAML-IAHPNISDAAVVP 470 (544)
Q Consensus 419 TgDl~~~~~~g----~----l-~~~GR~~d~i~~---~G~~--v~~~~ie~~l-~~~~~v~~~~v~~ 470 (544)
|||++...++. . + .+.||.+|+++. +|.. ++|..++..+ ...++|.+++++.
T Consensus 299 tGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q 365 (430)
T TIGR02304 299 LNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQ 365 (430)
T ss_pred CCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEE
Confidence 99999885542 2 4 389999999985 5555 5888898874 4578999998885
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.40 E-value=2e-11 Score=117.47 Aligned_cols=240 Identities=18% Similarity=0.203 Sum_probs=146.4
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCe-EEEEecchhhH---Hhh-HHHHHHHHHhC
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKED-VILCVLPLFHI---YSL-NSVLLCALRVG 253 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~---~g~-~~~~~~~l~~g 253 (544)
..++++..++.||||||.|.-+.+.+..+..........+....+..... .++...|.... .+. ..........+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 44567888999999999987777777766655544433332222222222 22333332211 111 11222233345
Q ss_pred cEEEEcc-CcCHHHHHHHH----HhccceeccCcHHHHHHHHhcCCCCCC--CCC-CceEEEEec------ccCC-HHHH
Q 009077 254 AAILIMQ-KFDIVKLMELV----QKYKVTVAPFVPPIVLAVAKSGDVDKY--DMS-SIRTVMSGA------APMG-KELE 318 (544)
Q Consensus 254 ~~~v~~~-~~~~~~~~~~i----~~~~~t~l~~~P~~l~~l~~~~~~~~~--~l~-~l~~~~~~G------~~l~-~~~~ 318 (544)
...++.+ .++.+.+...+ .+.++..+++.|.++..++...+..+. .|+ ..+.+..|| +.++ .+..
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 5544422 35676666655 355688888988887777665554443 333 344555555 5575 4788
Q ss_pred HHHHHHCCCC----ceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCCCCCCCCCCceeEEEecC
Q 009077 319 DAVRAKLPHA----KLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGA 394 (544)
Q Consensus 319 ~~~~~~~~~~----~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 394 (544)
+.+.+.| ++ ++++.||+||.....+.|- .+.. ...++ +.++|+++..+++.|+.|-|.+-++
T Consensus 246 ~~l~~~~-Gv~~~~~i~~~ygmtEl~s~~~~~~----------~~~~-~~p~w--V~iRDp~tl~~~~~Ge~Gli~vidl 311 (365)
T PF04443_consen 246 ARLQEVF-GVIPIENIYDMYGMTELNSQAYECG----------HGHF-HVPPW--VIIRDPETLEPLPPGETGLIQVIDL 311 (365)
T ss_pred HHHHHHH-CCCCHHHeeeeeeccccchhheeCC----------CCcc-cCCCe--EEEECCCCCcCCCCCCeeEEEEEcc
Confidence 8888888 55 8999999999886554430 1111 12244 7778999999999999999998666
Q ss_pred cccccccCChhhhhhhcCCCCceecCceEEEcCC--------CcEEEEccccceEEeCcee
Q 009077 395 QIMKGYLNDREATETTIDKEGWLHTGDIGYIDDD--------DELFIVDRLKELIKFKGFQ 447 (544)
Q Consensus 395 ~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~--------g~l~~~GR~~d~i~~~G~~ 447 (544)
.... ..+...|.|+|.+..+ .++.++||.+.. ..+|..
T Consensus 312 ~~~s--------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~a-e~RGCs 357 (365)
T PF04443_consen 312 ANTS--------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADGA-EIRGCS 357 (365)
T ss_pred cccC--------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCCC-ccCCcH
Confidence 4321 2344789999987654 268899998753 334443
No 133
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.30 E-value=5.9e-12 Score=91.90 Aligned_cols=70 Identities=41% Similarity=0.607 Sum_probs=62.0
Q ss_pred HHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccCCCcc--cEEEEecC-CCCCCCcc
Q 009077 452 ELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRI--NRVFFTDS-IPKAPSGK 527 (544)
Q Consensus 452 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p--~~~~~~~~-lP~t~~GK 527 (544)
|||++|.++|+|.+|+|+++.++..|+.+++++++ +.++|+++++.+|+.|+.| ..++.+++ ||+|++||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCCC
Confidence 69999999999999999999999999999999998 4589999999999999999 55666677 99999998
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.76 E-value=1.9e-08 Score=102.70 Aligned_cols=179 Identities=13% Similarity=0.154 Sum_probs=102.5
Q ss_pred CCCceEEEEecccCCHHHHHHHHHHCCCCc-eeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcCCC-
Q 009077 300 MSSIRTVMSGAAPMGKELEDAVRAKLPHAK-LGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDT- 377 (544)
Q Consensus 300 l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~-v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~- 377 (544)
+++++.+.+.+..-...-.+.+++.+|+.. +-..|++||+- + +... ........-.|-.+ ..+.++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~-i-~i~~------~~~~~~~~l~~~~~-ffEFip~~~~ 336 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF-I-GIPL------DPEDPGYVLAPDSG-FFEFIPVDED 336 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE-E-EEES-------CCC--EEE-TTSS-EEEEEE-STT
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceE-E-EEec------CCCCCceEeecCCe-EEEEEeccCC
Confidence 678997666655555567788888887644 44679999963 2 2211 01111222222223 556665432
Q ss_pred -------C-----CCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcC--CC--cEEEEccccceE
Q 009077 378 -------G-----ISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDD--DD--ELFIVDRLKELI 441 (544)
Q Consensus 378 -------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~--~g--~l~~~GR~~d~i 441 (544)
. ..+..|+.-||+++.. .|.| .|+.||+.++.. ++ .+.|.||.+.++
T Consensus 337 ~~~~~~~~~~l~~~ele~G~~YelviTt~---~GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l 399 (528)
T PF03321_consen 337 EQNPSEQPKTLLLHELEVGEEYELVITTN---SGLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQVL 399 (528)
T ss_dssp -------SSSEEGGG--TT-EEEEEEEST---TS-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEEE
T ss_pred cccccCCCceecHHHhcCCCeEEEEEecc---ccee--------------eeecCCEEEEeeccCCCcEEEEeccCCcee
Confidence 1 1357788889999764 1222 299999999853 34 699999999999
Q ss_pred EeCceeeCcHHHHHHHHcC-----CCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcc
Q 009077 442 KFKGFQVAPAELEAMLIAH-----PNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQV 505 (544)
Q Consensus 442 ~~~G~~v~~~~ie~~l~~~-----~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 505 (544)
.+.|++++-.+|++++.+. -.+.+..+.+.........-+.++.+... ..+.+++.+.|...|
T Consensus 400 ~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 400 SLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-PDDLEELAKALDESL 467 (528)
T ss_dssp -SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--HHHHHHHHHHHHHCS
T ss_pred ecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC-chHHHHHHHHHHHHh
Confidence 9999999999999988875 34677777765322333455666666543 223445666665555
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.31 E-value=0.00019 Score=73.90 Aligned_cols=135 Identities=12% Similarity=0.071 Sum_probs=81.5
Q ss_pred CCCceE---EEEecccCCHHHHHHHHHHCCCC-ceeccccccccCccccccccccCCCCccCCCeeeeccCCceEEEEcC
Q 009077 300 MSSIRT---VMSGAAPMGKELEDAVRAKLPHA-KLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDP 375 (544)
Q Consensus 300 l~~l~~---~~~~G~~l~~~~~~~~~~~~~~~-~v~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 375 (544)
+++++. +..||-. .-+..++..+++. .+...|++||+-. +.- ..+...... ..+-..+.+...+.++.
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~-gi~---~~~~~~p~~-~~~~l~~~~~ffEFiP~ 372 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYF-GIN---LNPMCKPSE-VSYTIMPNMAYFEFLPH 372 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEE-Eee---cCCCCCCCC-cceEecCCcEEEEeeec
Confidence 567444 4444433 5667777777655 4567899999642 211 111000011 11111123555666642
Q ss_pred CC-C------------CCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCC----CcEEEEcccc
Q 009077 376 DT-G------------ISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDD----DELFIVDRLK 438 (544)
Q Consensus 376 ~~-~------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~----g~l~~~GR~~ 438 (544)
++ + ..++.|+.-+|+|+.- .|.| .|+.||..++..- -.+.|.||.+
T Consensus 373 ~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~---~GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR~~ 435 (597)
T PLN02249 373 NHDGDGALDETSLVELADVEVGKEYELVITTY---AGLY--------------RYRVGDILRVTGFHNSAPQFKFIRRKN 435 (597)
T ss_pred ccCCcccCCCCcEecHHHcCCCCeEEEEEEcc---ccee--------------EeecCCEEEEeeccCCCcEEEEEccCC
Confidence 11 0 1245677778888553 1111 2999999998542 3588999999
Q ss_pred ceEEeCceeeCcHHHHHHHHc
Q 009077 439 ELIKFKGFQVAPAELEAMLIA 459 (544)
Q Consensus 439 d~i~~~G~~v~~~~ie~~l~~ 459 (544)
.++.+.|+++.-.+++.++.+
T Consensus 436 ~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 436 VLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred cceecccccCCHHHHHHHHHH
Confidence 999999999999999998877
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.88 E-value=0.0039 Score=63.85 Aligned_cols=138 Identities=12% Similarity=0.057 Sum_probs=83.6
Q ss_pred CCCceEEEEecccCCHHHHHHHHHHCCCCcee-ccccccccCccccccccccCCCCccCCCeeeeccCC-ceEEEEcCCC
Q 009077 300 MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLG-QGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRN-AEMKIVDPDT 377 (544)
Q Consensus 300 l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~-~~~~i~d~~~ 377 (544)
+++++.+.+....-.......++..+++..+. -.|++||+-.-.-.. +............|+ ...+.++.+.
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~------P~~~p~~~sy~L~p~~~yFEFip~~~ 376 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLN------PLCKPSEVSYTLIPTMAYFEFLPVHR 376 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccC------CCCCcccceeeecCCcEEEEEeeccC
Confidence 56788776655444555667777667777666 459999965322111 111111112222232 2334443111
Q ss_pred -------------------C-----CCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcC----CC
Q 009077 378 -------------------G-----ISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDD----DD 429 (544)
Q Consensus 378 -------------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~----~g 429 (544)
+ ..++.|+.-|++|+.-+ | -=.|+.||+.++.. .-
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---G--------------LyRYrlGDvv~V~Gf~n~~P 439 (612)
T PLN02620 377 NNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---G--------------LYRYRVGDVLRVAGFKNKAP 439 (612)
T ss_pred cccccccccccccccccccCccccHHHccCCCeEEEEEEecC---c--------------eEEEecCCEEEEeeecCCCc
Confidence 1 12466777788885431 1 11399999988743 35
Q ss_pred cEEEEccccceEEeCceeeCcHHHHHHHHcC
Q 009077 430 ELFIVDRLKELIKFKGFQVAPAELEAMLIAH 460 (544)
Q Consensus 430 ~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~ 460 (544)
.+.|++|.+-+..+.|++.+-.++..++.+.
T Consensus 440 ~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 440 QFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred eEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 6999999999989999999999998877654
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.88 E-value=0.0028 Score=64.98 Aligned_cols=138 Identities=12% Similarity=0.069 Sum_probs=85.2
Q ss_pred CCCceEEEEecccCCHHHHHHHHHHCCCCceec-cccccccCccccccccccCCCCccCCCeeeeccCC-ceEEEEcCCC
Q 009077 300 MSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQ-GYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRN-AEMKIVDPDT 377 (544)
Q Consensus 300 l~~l~~~~~~G~~l~~~~~~~~~~~~~~~~v~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~-~~~~i~d~~~ 377 (544)
+++++.+.+.-..-.......++..+++..++. .|++||+-.-.-. .+............|+ ...+.++.++
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl------~p~~~p~~~sy~L~p~~~yFEFip~~~ 365 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINL------KPLSDPSDVSYTLLPNMAYFEFLPVDK 365 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEecc------CcCCCccCCceeecCCcEEEEEeecCC
Confidence 577888766554445566677777777777665 6999996532211 1111111112222222 2334443111
Q ss_pred C-----------------------------CCCCCCCceeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEc--
Q 009077 378 G-----------------------------ISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYID-- 426 (544)
Q Consensus 378 ~-----------------------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~-- 426 (544)
+ ..++.|+.-||+|+.-+ +-=.|+.||+.++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~-----------------GLYRYrlGDvv~V~GF 428 (606)
T PLN02247 366 NNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT-----------------GLYRYRVGDILMVTGF 428 (606)
T ss_pred CcccccccccccccccccccccccCceecHHHccCCCeEEEEEEecC-----------------ceEEEecCCEEEEeee
Confidence 1 13456777788885421 11139999998874
Q ss_pred --CCCcEEEEccccceEEeCceeeCcHHHHHHHHcC
Q 009077 427 --DDDELFIVDRLKELIKFKGFQVAPAELEAMLIAH 460 (544)
Q Consensus 427 --~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~ 460 (544)
..-.+.|++|.+.+..+.|++.+-.++..++.+.
T Consensus 429 ~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 429 YNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred cCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 3356999999999999999999999998888764
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.55 E-value=0.00039 Score=53.43 Aligned_cols=83 Identities=18% Similarity=0.279 Sum_probs=48.9
Q ss_pred ceeeCcHHHHHHHHcCCCcc-eeEEEeeeCCCCCceEEEEEEecCCCCCC---H----HHHHHHHHhcccCCCcccEEEE
Q 009077 445 GFQVAPAELEAMLIAHPNIS-DAAVVPMKDEAAGEVPVAFVVRSNGSKIT---E----DEIKQYISKQVVFYKRINRVFF 516 (544)
Q Consensus 445 G~~v~~~~ie~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~----~~l~~~l~~~l~~~~~p~~~~~ 516 (544)
|.+++|.+||++|.++|++. ++.+..... ...+.+.+.|...++...+ . +++.+.++..+.--. -..++.
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~-~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~~-~V~lv~ 78 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTRE-GGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVRP-EVELVP 78 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEE-TTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS-E-EEEEE-
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcC-CCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCceE-EEEEEC
Confidence 78999999999999999998 666665444 4566777777777654321 2 345555555553321 113344
Q ss_pred ecCCCCCCCcccch
Q 009077 517 TDSIPKAPSGKILR 530 (544)
Q Consensus 517 ~~~lP~t~~GK~~r 530 (544)
..+||++ .||..|
T Consensus 79 ~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 79 PGTLPRS-EGKAKR 91 (96)
T ss_dssp TT-S----SSSS-S
T ss_pred CCCccCC-CCcceE
Confidence 4689998 588766
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.80 E-value=0.094 Score=51.53 Aligned_cols=92 Identities=23% Similarity=0.154 Sum_probs=77.1
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 52 VYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 52 ~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
-+|+.|....+..+|+.|...|..+||+|.....-+ ..-+...+|+.++|+.++|+.+. ..+....+++..++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 499999999999999999999999999999887722 12277889999999999999995 455667788999999999
Q ss_pred EecchhHHHHHHHhh
Q 009077 130 TQAVYNDKVRDLSEH 144 (544)
Q Consensus 130 ~~~~~~~~~~~~~~~ 144 (544)
+.+...-.+.+.+..
T Consensus 188 ~tps~~l~lae~~~~ 202 (438)
T COG1541 188 ATPSYLLYLAEEAEE 202 (438)
T ss_pred EChHHHHHHHHHHHH
Confidence 999887766665543
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=90.56 E-value=5 Score=40.77 Aligned_cols=82 Identities=13% Similarity=0.049 Sum_probs=63.2
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--HHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ--FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
..+|..++...+...+..+...|+++||++.+..+.+.. .....+++...|+.++|... ......+++..++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 458999999998888988888899999999998876543 23445788999998887653 2345677888999988
Q ss_pred EEecchh
Q 009077 129 ITQAVYN 135 (544)
Q Consensus 129 i~~~~~~ 135 (544)
+..+...
T Consensus 181 ~~~ps~l 187 (445)
T TIGR03335 181 VASVFKL 187 (445)
T ss_pred EECHHHH
Confidence 8766543
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=89.57 E-value=3.5 Score=41.55 Aligned_cols=89 Identities=21% Similarity=0.145 Sum_probs=68.9
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
-.+|..++......++..+...|+++||++....+.+. ......+++...|+.++++++.. .+.+...++..++.++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 34788888877777888888889999999988765443 22334677889999999998754 5778889999999999
Q ss_pred EEecchhHHHHH
Q 009077 129 ITQAVYNDKVRD 140 (544)
Q Consensus 129 i~~~~~~~~~~~ 140 (544)
++.+.....+.+
T Consensus 172 ~~~Ps~l~~L~~ 183 (422)
T TIGR02155 172 MVTPSYMLNLLE 183 (422)
T ss_pred EEcHHHHHHHHH
Confidence 998887665543
No 142
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=79.88 E-value=9.4 Score=38.00 Aligned_cols=109 Identities=17% Similarity=0.141 Sum_probs=77.5
Q ss_pred hhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccce
Q 009077 199 GVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVT 277 (544)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t 277 (544)
++.+|.+.+...+...+.++. .+++.+||++..+.|-+.. ++...+++-..|..++..++ +...++.-.+++.++.
T Consensus 75 g~R~Tf~~~~~ev~slAaGll-~lGL~kGDrVgvwgpN~~~--w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k 151 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLL-SLGLKKGDRVGVWGPNSYE--WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCK 151 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHH-hhcCCCCCEEEEecCChHH--HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeE
Confidence 455788888777777776666 6899999999999886543 33556677777877777654 5667788889999999
Q ss_pred eccCcHHHHH-----HHHhcC---------CCCCCCCCCceEEEEec
Q 009077 278 VAPFVPPIVL-----AVAKSG---------DVDKYDMSSIRTVMSGA 310 (544)
Q Consensus 278 ~l~~~P~~l~-----~l~~~~---------~~~~~~l~~l~~~~~~G 310 (544)
.++..|.+.. .+.+.+ ..+...++.+++++..+
T Consensus 152 ~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 152 ALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 9988776543 333322 22234578888888877
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.98 E-value=23 Score=36.53 Aligned_cols=85 Identities=14% Similarity=0.151 Sum_probs=64.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
..+|++.+...+..+.. ..++++++++...++.. ..+...+++++..|+.+++. +..+...+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 46899988766554433 34788999998887754 33455678999999988875 45688889999999999999
Q ss_pred EEecchhHHHH
Q 009077 129 ITQAVYNDKVR 139 (544)
Q Consensus 129 i~~~~~~~~~~ 139 (544)
...+.....+.
T Consensus 260 ~~~p~~~~~l~ 270 (513)
T PRK07656 260 PGPPTMYNSLL 270 (513)
T ss_pred echHHHHHHHH
Confidence 88877665544
No 144
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=75.58 E-value=33 Score=33.64 Aligned_cols=85 Identities=20% Similarity=0.266 Sum_probs=61.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEEe-----
Q 009077 62 SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIITQ----- 131 (544)
Q Consensus 62 ~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~----- 131 (544)
+..+.-.|+.+++++||-|.+ ++.-|+.+.=+++..|+.+|.+|-+ .+.+.++..+... .|+||.-
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~ 134 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQ 134 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccC
Confidence 555666677778999996654 4677899999999999999988754 3667788877764 6666653
Q ss_pred cchhHHHHHHHhhcCcEEE
Q 009077 132 AVYNDKVRDLSEHHGARIV 150 (544)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~v 150 (544)
....+.+.++.+..++.+|
T Consensus 135 ~~dm~~i~~la~~~~l~vI 153 (374)
T COG0399 135 PCDMDAIMALAKRHGLPVI 153 (374)
T ss_pred CCCHHHHHHHHHHcCCeEE
Confidence 2345667777776666554
No 145
>PLN02736 long-chain acyl-CoA synthetase
Probab=74.88 E-value=29 Score=37.31 Aligned_cols=103 Identities=11% Similarity=-0.039 Sum_probs=75.0
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~ 278 (544)
..+|.+.+...+..+...+. ..++.++|++...++-+.-+ ...+++++..|+.++... ...++.+...+++.++.+
T Consensus 77 ~~lTy~el~~~v~~lA~~L~-~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLV-QHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 34688888877777666554 46899999998888865543 356788888999988654 578999999999999999
Q ss_pred ccCcHHHHHHHHhcCCCCCCCCCCceEEEEe
Q 009077 279 APFVPPIVLAVAKSGDVDKYDMSSIRTVMSG 309 (544)
Q Consensus 279 l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~ 309 (544)
++..+..+..+..... .++.++.++..
T Consensus 154 l~~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 154 IFCVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred EEECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 9998877766554321 23455555544
No 146
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=73.47 E-value=22 Score=32.25 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=43.4
Q ss_pred HHcCCCCCCEEEEEcCCCc--cHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCc
Q 009077 70 SKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKA 125 (544)
Q Consensus 70 ~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 125 (544)
...|++++|++. .+|-.- .....+++++..|+..+.+ +.++++.+...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 877442 4456789999999999988 57899999888887765
No 147
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=72.66 E-value=15 Score=36.74 Aligned_cols=91 Identities=22% Similarity=0.249 Sum_probs=69.5
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++. -....+|+..+...+......+. ..++.+++++....+-+. .++..+++++..|+..+..
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~-~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALR-KLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHH-HTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHH-HhCCCccccccccCCccc--eeeeeeccccccccccccc
Confidence 567888876 13346788888877777766665 567899999888877653 3346788899999998887
Q ss_pred c-CcCHHHHHHHHHhccceeccC
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPF 281 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~ 281 (544)
+ ....+.+...+++.++++++.
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETTSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccccceeEEEE
Confidence 6 468899999999999999885
No 148
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=72.53 E-value=44 Score=34.54 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=64.2
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccH-HHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF-VFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
-.+|++.+...+..... ..++++++++....+..-.. +...++++..|+.++..+.. +...+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 45899988866655544 45789999999887754322 34455688999998887775 888999999999999999
Q ss_pred EecchhHHHH
Q 009077 130 TQAVYNDKVR 139 (544)
Q Consensus 130 ~~~~~~~~~~ 139 (544)
+.+.....+.
T Consensus 261 ~~p~~~~~l~ 270 (521)
T PRK06187 261 AVPTIWQMLL 270 (521)
T ss_pred chHHHHHHHH
Confidence 9887666544
No 149
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=72.47 E-value=94 Score=30.75 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=79.5
Q ss_pred CCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHhhCCeEeecCCC
Q 009077 39 ADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTANPF 110 (544)
Q Consensus 39 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 110 (544)
++.++++.-..+ ..+|++.+...+..+.. ..++++++++....+.... .+..+++.+..|+..+..++.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 566666532222 56888888877776655 3467789999888775544 466678888999888887776
Q ss_pred CC--HHHHHHHHHhcCceEEEEecchhHHHHHHHh--hcCcEEEEeCC
Q 009077 111 YT--PPEIAKQAIASKAKIIITQAVYNDKVRDLSE--HHGARIVTIDP 154 (544)
Q Consensus 111 ~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~v~~~~ 154 (544)
.. ...+..+++..++..+++.+.....+..... ...++.+...+
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g 243 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGG 243 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeC
Confidence 55 6788999999999999999988777665432 11445554443
No 150
>PRK08315 AMP-binding domain protein; Validated
Probab=72.04 E-value=41 Score=35.25 Aligned_cols=83 Identities=11% Similarity=0.088 Sum_probs=62.9
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
-.+|++.+...+..+... .+++++|++....+- ...++..+++++..|+..+......++..+...+++.++..+
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 468898887665554433 478999999887764 344556678899999988866666788889999999999999
Q ss_pred EEecchhH
Q 009077 129 ITQAVYND 136 (544)
Q Consensus 129 i~~~~~~~ 136 (544)
+..+....
T Consensus 294 ~~~P~~~~ 301 (559)
T PRK08315 294 YGVPTMFI 301 (559)
T ss_pred ecchHHHH
Confidence 88776543
No 151
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.47 E-value=36 Score=32.20 Aligned_cols=74 Identities=9% Similarity=0.088 Sum_probs=57.2
Q ss_pred HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhh
Q 009077 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEH 144 (544)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~ 144 (544)
-|++.|++||.+|+|..--+.-++.++||.+. |..++-++.. ...-+..++..++...+...+..+....+...
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~--~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTS--SKKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCC--chhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 35668999999999999999999999999875 7777777764 33456678888998888877666666655443
No 152
>PRK12583 acyl-CoA synthetase; Provisional
Probab=70.64 E-value=54 Score=34.32 Aligned_cols=82 Identities=17% Similarity=0.208 Sum_probs=62.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
..+|++.+...+..+... .+++++|++....+- ....+...++++..|..++......+...+...+++.++..+
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468999987666554443 478899999877653 355667778889999988855555678888899999999999
Q ss_pred EEecchh
Q 009077 129 ITQAVYN 135 (544)
Q Consensus 129 i~~~~~~ 135 (544)
+..+...
T Consensus 296 ~~~P~~~ 302 (558)
T PRK12583 296 YGVPTMF 302 (558)
T ss_pred eccHHHH
Confidence 8877654
No 153
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=70.50 E-value=82 Score=29.58 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=66.4
Q ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCC----CHHHHHHHHHhcCc
Q 009077 50 GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY----TPPEIAKQAIASKA 125 (544)
Q Consensus 50 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~ 125 (544)
+..+-.+-+ .|.-.||..|++. |..|..++......+.. .+...|..+..++-.. ...++..+++..++
T Consensus 9 ~~~iG~GHv-~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~ 81 (279)
T TIGR03590 9 SSEIGLGHV-MRCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKF 81 (279)
T ss_pred CccccccHH-HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCC
Confidence 344555544 4677889999764 66777777776655443 3357888777775432 24468888888999
Q ss_pred eEEEEecch-hHHHHHHHhhcCcEEEEeCCCCC
Q 009077 126 KIIITQAVY-NDKVRDLSEHHGARIVTIDPPPE 157 (544)
Q Consensus 126 ~~vi~~~~~-~~~~~~~~~~~~~~~v~~~~~~~ 157 (544)
.++|+|... ...+.........+++++++...
T Consensus 82 d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~ 114 (279)
T TIGR03590 82 DILIVDHYGLDADWEKLIKEFGRKILVIDDLAD 114 (279)
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCC
Confidence 999999743 33444444445678888876543
No 154
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=69.15 E-value=62 Score=33.81 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=70.3
Q ss_pred cCCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHhhCCeEeec
Q 009077 37 QFADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTA 107 (544)
Q Consensus 37 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 107 (544)
..|+.++++.-.+| -.+|++.+...+.... ...++.++|++...+|-. ..+....+..+..|+..+..
T Consensus 180 ~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~ 256 (539)
T PRK06334 180 KDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFA 256 (539)
T ss_pred CCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEe
Confidence 35677777542222 5699998876654433 335678899988877632 23334457778889888776
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecchhHHHHH
Q 009077 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (544)
Q Consensus 108 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 140 (544)
....++..+...+++.++..+...+.....+..
T Consensus 257 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 257 YNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred cCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 555778899999999999999988877665543
No 155
>PRK09274 peptide synthase; Provisional
Probab=68.01 E-value=29 Score=36.39 Aligned_cols=101 Identities=12% Similarity=0.097 Sum_probs=69.9
Q ss_pred CCCCEEEEecCCCC-CCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 180 NPDDVVALPYSSGT-TGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 180 ~~~~~~~i~~TSGt-TG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
.|+.++++....++ ....+...+|...+...+......+. ..++.+++++...++-+. .+...+++++..|+..+.
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~-~~g~~~gd~V~~~~~n~~--~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLN-AAGIGRGMRAVLMVTPSL--EFFALTFALFKAGAVPVL 95 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCcH--HHHHHHHHHHHcCeEEEE
Confidence 34566655433222 12233446888888877776666554 457899999999887654 334568889999999887
Q ss_pred ccC-cCHHHHHHHHHhccceeccCcH
Q 009077 259 MQK-FDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 259 ~~~-~~~~~~~~~i~~~~~t~l~~~P 283 (544)
.+. ...+.+...+++.++..++..+
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEecc
Confidence 654 6778888888988888877644
No 156
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=67.97 E-value=36 Score=33.46 Aligned_cols=85 Identities=19% Similarity=0.308 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEEecc---
Q 009077 62 SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIITQAV--- 133 (544)
Q Consensus 62 ~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~~~--- 133 (544)
+..+-..|...|+++||.|++- +.-+..+.-|+..+|+.+|.+|-+ .+.+.+...+.... ++|+...-
T Consensus 50 t~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h~~G~ 125 (363)
T PF01041_consen 50 TSALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVHLFGN 125 (363)
T ss_dssp HHHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-GGGB
T ss_pred hHHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEecCCCC
Confidence 3445556677899999999886 455677788999999999988754 35677777776433 66665432
Q ss_pred --hhHHHHHHHhhcCcEEE
Q 009077 134 --YNDKVRDLSEHHGARIV 150 (544)
Q Consensus 134 --~~~~~~~~~~~~~~~~v 150 (544)
..+.+.++....++.+|
T Consensus 126 ~~d~~~i~~~~~~~~i~lI 144 (363)
T PF01041_consen 126 PADMDAIRAIARKHGIPLI 144 (363)
T ss_dssp ---HHHHHHHHHHTT-EEE
T ss_pred cccHHHHHHHHHHcCCcEE
Confidence 34555555555455443
No 157
>PLN03052 acetate--CoA ligase; Provisional
Probab=67.84 E-value=28 Score=37.97 Aligned_cols=101 Identities=16% Similarity=0.183 Sum_probs=73.3
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.++.++.+....+..+.+ ...+|...+...+..+...+. ..++.++|++...+|..-. .+..+++++..|+..+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrVai~~pn~~e--~via~LA~~~~Gav~vpi 263 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALD-ALGFEKGDAIAIDMPMNVH--AVIIYLAIILAGCVVVSI 263 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHH--HHHHHHHHHHcCCEEEee
Confidence 457777765443321222 245788888877777766555 4689999999999996543 336688889999988776
Q ss_pred c-CcCHHHHHHHHHhccceeccCcHH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVPP 284 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~ 284 (544)
. .+..+.+...+.+.++.+++....
T Consensus 264 ~p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 264 ADSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 5 578999999999999988876553
No 158
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=65.38 E-value=41 Score=33.82 Aligned_cols=82 Identities=13% Similarity=0.080 Sum_probs=61.1
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
..+|++.+...+..+... .+++++|++....+..- -.+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 468999998876666554 47899999988776532 2234568889999998887653 3788889999999998
Q ss_pred EecchhHHH
Q 009077 130 TQAVYNDKV 138 (544)
Q Consensus 130 ~~~~~~~~~ 138 (544)
..+.....+
T Consensus 203 ~~P~~l~~l 211 (436)
T TIGR01923 203 LVPTQLNRL 211 (436)
T ss_pred eHHHHHHHH
Confidence 877665444
No 159
>PLN03051 acyl-activating enzyme; Provisional
Probab=65.15 E-value=60 Score=33.53 Aligned_cols=97 Identities=11% Similarity=-0.071 Sum_probs=66.0
Q ss_pred CCccEEEeCCC-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHhhCCeEeecCCC
Q 009077 39 ADRPCIINGPT-------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTANPF 110 (544)
Q Consensus 39 p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 110 (544)
|+.++++.-.+ +-.+|++.+...+... ....++.++|++...+|-+-. .+..+++++..|+..+..+..
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 45666653222 2468888766544332 234578899988776663321 234678888999999888755
Q ss_pred CCHHHHHHHHHhcCceEEEEecchhHHH
Q 009077 111 YTPPEIAKQAIASKAKIIITQAVYNDKV 138 (544)
Q Consensus 111 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 138 (544)
.....+...+++.++.++...+.....+
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~~~~~l 222 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPSIVKAW 222 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHHHHHHH
Confidence 5678889999999999999887766554
No 160
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=64.59 E-value=68 Score=35.14 Aligned_cols=121 Identities=13% Similarity=0.149 Sum_probs=82.5
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCC--ccCCCC-----------eEEEEecchhhHHhhHHHH
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPN--LYLHKE-----------DVILCVLPLFHIYSLNSVL 246 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~-----------~~~~~~~p~~~~~g~~~~~ 246 (544)
.|+.++++....| .+ ...+|.+.+...+..+..++... .++.++ |++....+-+. .+....
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVAD 147 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHH
Confidence 3567776543222 11 23578888887777777666532 467777 78877777543 333567
Q ss_pred HHHHHhCcEEEEcc-CcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEec
Q 009077 247 LCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA 310 (544)
Q Consensus 247 ~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G 310 (544)
++++..|+..+... .+.++.+...+.+-++.+++..+.++..+.+... .++.++.+++-+
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~~ 208 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIILD 208 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEEC
Confidence 88888898887765 5789999999999999999888877777655422 245666666544
No 161
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=64.19 E-value=33 Score=36.86 Aligned_cols=97 Identities=16% Similarity=0.113 Sum_probs=71.1
Q ss_pred CCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc
Q 009077 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (544)
Q Consensus 181 ~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 260 (544)
++.++++....+. + ....+|...+...+..+...+. ..++.++|++...+|..--. ...++++...|+..+...
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLL-NLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLF 148 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeC
Confidence 4666665432211 1 1246899999888877776665 46899999999999976543 356888889999876654
Q ss_pred -CcCHHHHHHHHHhccceeccCcH
Q 009077 261 -KFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
.+..+.+...+++.++++++...
T Consensus 149 ~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 149 DGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcc
Confidence 57899999999999999887653
No 162
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=63.47 E-value=72 Score=33.59 Aligned_cols=99 Identities=12% Similarity=0.051 Sum_probs=69.0
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHhhCCeEeecC
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTAN 108 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~ 108 (544)
.++.++++.-.++ -.+|++.+...+.. .....+++++|++....+... .....+++.+..|+..+...
T Consensus 203 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 203 DREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 3456666532222 46888887654433 333457888998776655442 23456788899999988877
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecchhHHHH
Q 009077 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (544)
Q Consensus 109 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 139 (544)
...+...+...+++.++.++...+.....+.
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 7788999999999999999998887666554
No 163
>PRK06839 acyl-CoA synthetase; Validated
Probab=63.44 E-value=54 Score=33.64 Aligned_cols=99 Identities=14% Similarity=0.041 Sum_probs=72.8
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++. + ...+|+..+...+......+....++.+++++...++-+.. +...+++++..|+..+..
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~ 83 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPL 83 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEec
Confidence 356666653 1 34678888887777776655434578899999888876643 446688899999998877
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHHHHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (544)
+. .....+...+++.+++.++..+.+...+
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 84 NIRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred CcccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 64 6788888999999999998877765443
No 164
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=63.32 E-value=42 Score=36.49 Aligned_cols=105 Identities=11% Similarity=0.046 Sum_probs=76.6
Q ss_pred hhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccce
Q 009077 199 GVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVT 277 (544)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t 277 (544)
...+|...+...+..+...+. ..++.+++++...++-... +....++++..|+..+... ...++.+...+.+.++.
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~-~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 180 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLV-ALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVT 180 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCC
Confidence 345788888877777666554 4678999999888875543 3356788889999988655 57889999999999999
Q ss_pred eccCcHHHHHHHHhcCCCCCCCCCCceEEEEec
Q 009077 278 VAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA 310 (544)
Q Consensus 278 ~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G 310 (544)
+++.....+..+.+... .++.++.+++-+
T Consensus 181 ~li~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 181 TVICDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred EEEECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 99988877776654322 234566665544
No 165
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=62.66 E-value=88 Score=30.94 Aligned_cols=77 Identities=18% Similarity=0.129 Sum_probs=46.0
Q ss_pred HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEEecc-----hhHH
Q 009077 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIITQAV-----YNDK 137 (544)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~~~-----~~~~ 137 (544)
.+...++++||.|.+-. +.+.....++...|+.+++++.+ .+.+.+...+.. +.++|+.... ..+.
T Consensus 62 ~l~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~~G~~~d~~~ 137 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVHYAGVACDMDT 137 (376)
T ss_pred HHHHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCCCCCccCHHH
Confidence 34445789999988744 44555666777889888877643 345666666543 5666664432 2234
Q ss_pred HHHHHhhcCcE
Q 009077 138 VRDLSEHHGAR 148 (544)
Q Consensus 138 ~~~~~~~~~~~ 148 (544)
+.++....+..
T Consensus 138 I~~la~~~~i~ 148 (376)
T TIGR02379 138 IMALANKHQLF 148 (376)
T ss_pred HHHHHHHCCCE
Confidence 44454444443
No 166
>PLN02654 acetate-CoA ligase
Probab=62.44 E-value=37 Score=36.65 Aligned_cols=98 Identities=20% Similarity=0.238 Sum_probs=71.0
Q ss_pred CCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc
Q 009077 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (544)
Q Consensus 181 ~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 260 (544)
++.++++..... .+ ....+|...+...+..+...+. ..++.++|++...+|..- ..+..+++++..|+..+...
T Consensus 103 ~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrV~i~~pn~~--e~v~a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 103 GDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLK-DVGVKKGDAVVIYLPMLM--ELPIAMLACARIGAVHSVVF 176 (666)
T ss_pred CCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEecC
Confidence 566766542221 11 1245789999887777766655 568999999999988655 33467888999999987764
Q ss_pred -CcCHHHHHHHHHhccceeccCcHH
Q 009077 261 -KFDIVKLMELVQKYKVTVAPFVPP 284 (544)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~ 284 (544)
.+..+.+...+++.++.+++....
T Consensus 177 ~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 177 AGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCc
Confidence 578999999999999988876543
No 167
>PLN02565 cysteine synthase
Probab=62.38 E-value=94 Score=29.95 Aligned_cols=91 Identities=12% Similarity=0.036 Sum_probs=63.1
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 119 (544)
++.+-....+-+-||++= -+..+-..+.+.|. .+|....+-...+=.-+.+.++|...|..++.+-|...+......
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 344444433445556543 33333344444564 788665566666666777778889999999988888888899999
Q ss_pred HHhcCceEEEEecc
Q 009077 120 AIASKAKIIITQAV 133 (544)
Q Consensus 120 l~~~~~~~vi~~~~ 133 (544)
++..+++++++++.
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999998864
No 168
>PRK07529 AMP-binding domain protein; Validated
Probab=61.53 E-value=34 Score=36.63 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCCCEEEEecCCC-CCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 180 NPDDVVALPYSSG-TTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 180 ~~~~~~~i~~TSG-tTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
.|+.++.+....+ ..+ +...+|...+...+......+. ..++.+++++...+|-+.. ....+++++..|..+.+
T Consensus 38 ~p~~~Al~~~~~~~~~~--~~~~~Ty~eL~~~v~~~A~~L~-~~Gi~~gd~V~i~~~n~~e--~~~~~lA~~~~Gi~~pi 112 (632)
T PRK07529 38 HPDAPALSFLLDADPLD--RPETWTYAELLADVTRTANLLH-SLGVGPGDVVAFLLPNLPE--THFALWGGEAAGIANPI 112 (632)
T ss_pred CCCCceEEeecccCCCC--CCceeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCEEEeC
Confidence 4566776654332 222 3456888888777776666555 4678999999999986553 33567778888854434
Q ss_pred ccCcCHHHHHHHHHhccceeccCc
Q 009077 259 MQKFDIVKLMELVQKYKVTVAPFV 282 (544)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t~l~~~ 282 (544)
.+...++.+...+++.++..++..
T Consensus 113 ~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 113 NPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCcCCHHHHHHHHHhcCCcEEEEe
Confidence 455788999999999999888764
No 169
>PLN02614 long-chain acyl-CoA synthetase
Probab=61.14 E-value=61 Score=35.01 Aligned_cols=86 Identities=6% Similarity=-0.107 Sum_probs=66.4
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+. ..++.++|++...++-+.- ++...++++..|+..+... ....+.+...+++.++.++
T Consensus 79 ~~Ty~el~~~v~~lA~~L~-~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~v 155 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLR-SVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIV 155 (666)
T ss_pred EeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEE
Confidence 4688888777776666554 4688999999988886553 3456888999999988765 4688899999999999998
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+.....+..+
T Consensus 156 i~~~~~~~~~ 165 (666)
T PLN02614 156 FVEEKKISEL 165 (666)
T ss_pred EECHHHHHHH
Confidence 8877655544
No 170
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=61.10 E-value=38 Score=36.22 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=71.5
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++.+.... .+|. ...+|...+...+..+...+. ..++.++|++...+|.+.. .+..+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLK-SLGVKKGDRVAIYMPMIPE--AAIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCCEEecc
Confidence 467777765332 1222 345788888877777766555 4689999999999886543 346688899999998776
Q ss_pred c-CcCHHHHHHHHHhccceeccCcH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
. .+..+.+...+++.++++++...
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~ 168 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITAD 168 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 4 57889999999999999887654
No 171
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=60.07 E-value=70 Score=32.98 Aligned_cols=85 Identities=15% Similarity=0.124 Sum_probs=65.4
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
..+|+..+...+..+...+ +++++|++...++-+-. .+..+++++..|+..+..+ ..+...+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEe
Confidence 5689999987776665443 57899999988885543 3456788899999998665 46788899999999999999
Q ss_pred EecchhHHHH
Q 009077 130 TQAVYNDKVR 139 (544)
Q Consensus 130 ~~~~~~~~~~ 139 (544)
..+.....+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 9887765543
No 172
>PRK11761 cysM cysteine synthase B; Provisional
Probab=58.77 E-value=1e+02 Score=29.20 Aligned_cols=89 Identities=13% Similarity=0.028 Sum_probs=61.4
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 119 (544)
++.+-....+.+-++++ +.+..+...+.+.| +++|++|.. ...+=.-..+.++|.+.|..+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 45554443345556665 33333444445555 477877655 455555677778888999998888887777788889
Q ss_pred HHhcCceEEEEec
Q 009077 120 AIASKAKIIITQA 132 (544)
Q Consensus 120 l~~~~~~~vi~~~ 132 (544)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 173
>PLN03102 acyl-activating enzyme; Provisional
Probab=58.44 E-value=34 Score=36.17 Aligned_cols=84 Identities=12% Similarity=0.122 Sum_probs=64.8
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+. ..++.++|++...+|-.- .+...+++++..|+.++..+. ...+.+...++..+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~-~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLI-SLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEE
Confidence 4788888777777666554 457899999998888543 344568899999999887654 688999999999999998
Q ss_pred cCcHHHHH
Q 009077 280 PFVPPIVL 287 (544)
Q Consensus 280 ~~~P~~l~ 287 (544)
+..+.+..
T Consensus 116 i~~~~~~~ 123 (579)
T PLN03102 116 FVDRSFEP 123 (579)
T ss_pred EEChhhHH
Confidence 87665543
No 174
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=58.37 E-value=47 Score=35.58 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=71.2
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++..... ......+|.+.+...+..+...+. ..++.++|++...+|-.-. ....+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALK-SLGVKKGDRVAIYMPMIPE--AAVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEec
Confidence 4677777653211 012346899998887777766554 4678999999998886553 335688899999998876
Q ss_pred c-CcCHHHHHHHHHhccceeccCcH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
. .+..+.+...+++.++.+++...
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 5 47888999999999998887644
No 175
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=57.94 E-value=52 Score=35.21 Aligned_cols=98 Identities=18% Similarity=0.179 Sum_probs=70.3
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++.... .+|. .-.+|...+...+..+...+. ..++.++|++...+|..- ..+..+++++..|+..+..
T Consensus 65 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~Gd~V~i~~~n~~--e~v~~~lA~~~~Gav~vpl 138 (628)
T TIGR02316 65 RGEQLALVTVSS-ETGQ--ERTLTYRQLHREVNVFASALR-ALGVGRGDRVLIYMPMIA--EAVFAMLACARIGAIHSVV 138 (628)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEEec
Confidence 356676654322 2222 235788888877777766655 468999999999998654 3346688899999998766
Q ss_pred c-CcCHHHHHHHHHhccceeccCcH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
. .+....+...+++.++.+++...
T Consensus 139 ~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 139 FGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCCHHHHHHHHHhcCceEEEECC
Confidence 4 57888999999999998877643
No 176
>PLN02574 4-coumarate--CoA ligase-like
Probab=57.86 E-value=64 Score=33.90 Aligned_cols=101 Identities=20% Similarity=0.231 Sum_probs=70.7
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.++.++++...+ + ..+|...+...+......+....++.++|++....+-+. .+...+++++..|+..+..
T Consensus 52 ~~~~~a~~~~~~---~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALIDSST---G----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEECCC---C----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCc
Confidence 456666654222 2 146788887777666665552267899999999988554 3335678899999998876
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHHHHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (544)
+. ....++...+++.++..++..+..+..+
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 64 6788889999999888887776655444
No 177
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=57.79 E-value=1.3e+02 Score=31.67 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=68.6
Q ss_pred CCCccEEEeCCC---C----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC-ccHHHHHHHHHhhCCeEeecCC
Q 009077 38 FADRPCIINGPT---G----DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASYIGATSTTANP 109 (544)
Q Consensus 38 ~p~~~a~~~~~~---~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~ 109 (544)
.++.++++.-.+ + -.+|++.+...+.... ...++.++|++....|-. ...+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 456666653222 2 4688888865544432 235788999988877733 22344567888889887766 4
Q ss_pred CCCHHHHHHHHHhcCceEEEEecchhHHHHH
Q 009077 110 FYTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (544)
Q Consensus 110 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 140 (544)
..+...+...+++.++..+...+.....+..
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 5788889999999999999998887665543
No 178
>PRK07788 acyl-CoA synthetase; Validated
Probab=57.48 E-value=41 Score=35.18 Aligned_cols=86 Identities=19% Similarity=0.159 Sum_probs=65.6
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+. ..++.+++++...++-+- .+...+++++..|+..+..+. ...+.+...+++.+++.+
T Consensus 74 ~~Ty~el~~~~~~la~~L~-~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 74 TLTYAELDEQSNALARGLL-ALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEE
Confidence 5788888777766665544 347889999988876543 344678899999999988764 678889999999999998
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+..+.+...+
T Consensus 151 i~~~~~~~~~ 160 (549)
T PRK07788 151 VYDDEFTDLL 160 (549)
T ss_pred EECchhHHHH
Confidence 8877665544
No 179
>PLN02246 4-coumarate--CoA ligase
Probab=57.33 E-value=55 Score=34.10 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=68.9
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.++.++.+...+ +..+|+..+...+......+. ..++.+++++....+-+. .....+++++..|+..+..
T Consensus 36 ~~~~~a~~~~~~-------~~~~ty~el~~~~~~la~~L~-~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l 105 (537)
T PLN02246 36 FSDRPCLIDGAT-------GRVYTYADVELLSRRVAAGLH-KLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTA 105 (537)
T ss_pred CCCCeEEEecCC-------CceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecC
Confidence 356666653221 135788888777666655444 357889999988877653 3446678889999998876
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHHHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVLA 288 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~ 288 (544)
+. .....+...++..++..++........
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 135 (537)
T PLN02246 106 NPFYTPAEIAKQAKASGAKLIITQSCYVDK 135 (537)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEccchHHH
Confidence 64 678889999999999888766554443
No 180
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=57.08 E-value=48 Score=35.67 Aligned_cols=96 Identities=17% Similarity=0.115 Sum_probs=69.3
Q ss_pred CCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc
Q 009077 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ 260 (544)
Q Consensus 181 ~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 260 (544)
++.++++.... .|. ...+|...+...+..+...+. ..++.++|++...+|-+.. ....+++++..|+..+...
T Consensus 98 ~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--~v~~~lA~~~~Gav~v~l~ 170 (655)
T PRK03584 98 DDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALR-ALGVGPGDRVAAYLPNIPE--TVVAMLATASLGAIWSSCS 170 (655)
T ss_pred CCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCcEEEeeC
Confidence 56777665332 121 245788888877777666554 4578999999999986543 3466889999999987765
Q ss_pred -CcCHHHHHHHHHhccceeccCcH
Q 009077 261 -KFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
.+..+.+...++..++.+++...
T Consensus 171 ~~~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 171 PDFGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred CCCCHHHHHHHHHHcCCcEEEEcc
Confidence 47888899999999888877654
No 181
>PRK05857 acyl-CoA synthetase; Validated
Probab=55.93 E-value=54 Score=34.28 Aligned_cols=96 Identities=15% Similarity=0.152 Sum_probs=68.7
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++... | ...+|...+...+..+...+. ..++.+++++...++-+.. ++..+++++..|+..+..
T Consensus 27 ~p~~~a~~~~~-~------~~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~e--~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 27 QPEAIALRRCD-G------TSALRYRELVAEVGGLAADLR-AQSVSRGSRVLVISDNGPE--TYLSVLACAKLGAIAVMA 96 (540)
T ss_pred CCCcEEEeecC-C------CceeeHHHHHHHHHHHHHHHH-HhCcCCCCEEEEEcCCCHH--HHHHHHHHHHcCeEEEec
Confidence 46676665332 2 135788888777777666554 3578899999988876554 335688999999999887
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPI 285 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~ 285 (544)
+. ...+.+...++..++..++..+..
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccc
Confidence 64 678888888888888877766543
No 182
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=55.82 E-value=1.1e+02 Score=31.14 Aligned_cols=85 Identities=12% Similarity=0.094 Sum_probs=61.7
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
..+|++.+...+... ....+++++|++...+|-.-. .+..+++.+..|+..+..+ ..+...+...+++.++..+.
T Consensus 159 v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 468888876544332 233688999999998874322 2344677788899988776 46788999999999999999
Q ss_pred EecchhHHHH
Q 009077 130 TQAVYNDKVR 139 (544)
Q Consensus 130 ~~~~~~~~~~ 139 (544)
..+.....+.
T Consensus 235 ~~P~~~~~l~ 244 (483)
T PRK03640 235 VVSTMLQRLL 244 (483)
T ss_pred eHHHHHHHHH
Confidence 9887666543
No 183
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.93 E-value=68 Score=33.70 Aligned_cols=84 Identities=13% Similarity=0.082 Sum_probs=63.8
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+....++.+++++...++-+.. +...+++++..|+..+..+. +..+++...+.+.++..+
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~--~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQ--YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 578888887777776655433478899999998886553 33568889999999987664 678889999999999888
Q ss_pred cCcHHHH
Q 009077 280 PFVPPIV 286 (544)
Q Consensus 280 ~~~P~~l 286 (544)
+......
T Consensus 127 i~~~~~~ 133 (562)
T PRK05677 127 VCLANMA 133 (562)
T ss_pred EEecchh
Confidence 7655443
No 184
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=54.91 E-value=32 Score=28.26 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---CccHHHHHHHHHhhCCe
Q 009077 63 RKVAAGLSKLGVQKGDVIMLLLQN---CPQFVFAFLGASYIGAT 103 (544)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~i~~~~---~~~~~~~~lA~~~~G~~ 103 (544)
..++..|.+.|+.+++.|.+++.. +.....+++++-.+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 478888999999999999999975 56666777788888865
No 185
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=54.83 E-value=1.2e+02 Score=29.89 Aligned_cols=62 Identities=18% Similarity=0.123 Sum_probs=49.3
Q ss_pred HcC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEec
Q 009077 71 KLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (544)
Q Consensus 71 ~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 132 (544)
+.| +++|....|....+-.-+.+.++|...|..+..+-|...+......++..+++++++++
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 345 67885545556666667777888899999999888887788888999999999999874
No 186
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=54.82 E-value=54 Score=34.26 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=68.5
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++....| ..+|+..+...+..+...+. ..++.+++++...++-...+ ...+++++..|+..+..
T Consensus 41 ~p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl 110 (546)
T PLN02330 41 YADKVAFVEAVTG-------KAVTYGEVVRDTRRFAKALR-SLGLRKGQVVVVVLPNVAEY--GIVALGIMAAGGVFSGA 110 (546)
T ss_pred CCCccEEEecCCC-------CcccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEeccC
Confidence 3566666532222 35788888777766665544 34788999998887765533 35678899999998876
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPIVL 287 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~l~ 287 (544)
+. ....++...+++.++..++..+..+.
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 111 NPTALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 54 57788899999988888766554443
No 187
>PRK08316 acyl-CoA synthetase; Validated
Probab=54.34 E-value=70 Score=33.08 Aligned_cols=87 Identities=15% Similarity=0.058 Sum_probs=64.8
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~ 278 (544)
..+|...+...+......+. ..++.+++++....+-+.. +...+++++..|+..+..+. ...+.+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~-~~gi~~~~~V~l~~~~~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALL-DLGLKKGDRVAALGHNSDA--YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 45788888777766665544 3478899999988876554 33568889999998887764 67888999999999998
Q ss_pred ccCcHHHHHHH
Q 009077 279 APFVPPIVLAV 289 (544)
Q Consensus 279 l~~~P~~l~~l 289 (544)
++........+
T Consensus 112 ii~~~~~~~~~ 122 (523)
T PRK08316 112 FLVDPALAPTA 122 (523)
T ss_pred EEEccchHHHH
Confidence 87776655444
No 188
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=53.77 E-value=1.3e+02 Score=27.76 Aligned_cols=70 Identities=10% Similarity=0.079 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHhh------C--CeEeecCCCC---CHHHHHHHHHhcCceEE
Q 009077 61 TSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYI------G--ATSTTANPFY---TPPEIAKQAIASKAKII 128 (544)
Q Consensus 61 ~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~v 128 (544)
..+++.+.+.+.+ +.+|++|+|..+-+.|.++++..+... + ..++.++.+. ..+.+..+.+..+..+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3455666677765 478999999999999999887777543 2 3444555533 22333444444554444
Q ss_pred EE
Q 009077 129 IT 130 (544)
Q Consensus 129 i~ 130 (544)
+.
T Consensus 92 v~ 93 (258)
T PRK10696 92 IE 93 (258)
T ss_pred EE
Confidence 43
No 189
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=53.44 E-value=89 Score=32.29 Aligned_cols=101 Identities=11% Similarity=0.025 Sum_probs=69.7
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++.... .+.. -.+|...+...+......+. ..++.+++++....+-+..+ ...+++++..|+..+..
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~-~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l 92 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFY-SLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPI 92 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEc
Confidence 456677654321 1211 24677777666666655443 35788999999888766543 35678899999998876
Q ss_pred c-CcCHHHHHHHHHhccceeccCcHHHHH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVPPIVL 287 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~ 287 (544)
+ ....+.+...+++.+++.++..+....
T Consensus 93 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 93 NARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecchhH
Confidence 5 468888999999999999877766543
No 190
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=53.40 E-value=55 Score=31.56 Aligned_cols=60 Identities=15% Similarity=0.047 Sum_probs=47.1
Q ss_pred HHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEec
Q 009077 69 LSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (544)
Q Consensus 69 L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 132 (544)
|+..+++||++|+|..--+.-.+.+++|-+.- +.++-++.+ ++-....++.++..++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 34468999999999988899999999987654 888888763 3445566778888888865
No 191
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=53.14 E-value=66 Score=33.62 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=68.4
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++..-.+ .++...+|...+...+..+...+. ..++.+++++...++-+..+ ...+++++..|+..+..
T Consensus 37 ~p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl 110 (547)
T PRK13295 37 CPDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLA-RLGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPL 110 (547)
T ss_pred CCCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEecc
Confidence 3566666553322 223346788888777666665544 45788999999988865543 35688899999998876
Q ss_pred cC-cCHHHHHHHHHhccceeccCcH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P 283 (544)
.. ...+.+...++..++..++...
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 111 MPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred ccccCHHHHHHHHHhcCceEEEEec
Confidence 54 5778888889888888876544
No 192
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=52.61 E-value=62 Score=33.85 Aligned_cols=87 Identities=10% Similarity=0.052 Sum_probs=67.2
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++....+-...+ ...+++++..|+..+..+ ....+.+...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~-~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALA-AAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 5788888777776666554 45788999999887765543 467889999999988765 4688899999999999999
Q ss_pred cCcHHHHHHHH
Q 009077 280 PFVPPIVLAVA 290 (544)
Q Consensus 280 ~~~P~~l~~l~ 290 (544)
+........+.
T Consensus 123 ~~~~~~~~~~~ 133 (542)
T PRK06155 123 VVEAALLAALE 133 (542)
T ss_pred EEChhhHHHHH
Confidence 88877665554
No 193
>PRK06164 acyl-CoA synthetase; Validated
Probab=52.30 E-value=1.4e+02 Score=31.00 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=69.6
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC-ccHHHHHHHHHhhCCeEeecCC
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC-PQFVFAFLGASYIGATSTTANP 109 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~ 109 (544)
.++.++++.-.++ ..+|.+.+...+..++..+ ++.+++++...+|-+ .-.+..+++.+..|+.++..+
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 254 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEP- 254 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecC-
Confidence 3466676542222 4689988887666555544 678999998888754 223456788888898887764
Q ss_pred CCCHHHHHHHHHhcCceEEEEecchhHHHH
Q 009077 110 FYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (544)
Q Consensus 110 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 139 (544)
......+...+++.++..++..+.....+.
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~ 284 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRIL 284 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHHH
Confidence 567788899999999999988777665543
No 194
>PRK13388 acyl-CoA synthetase; Provisional
Probab=52.16 E-value=79 Score=33.03 Aligned_cols=84 Identities=10% Similarity=-0.083 Sum_probs=61.5
Q ss_pred hhchHHHHHHHHHhhhcCCCCccC-CCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhcccee
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYL-HKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~ 278 (544)
.+|...+...+..+...+. ..++ .+++++...++-+.. +...+++++..|+..+..+. ...+.+...+.+.++..
T Consensus 26 ~lTy~el~~~~~~la~~L~-~~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~ 102 (540)
T PRK13388 26 TWTWREVLAEAAARAAALI-ALADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQL 102 (540)
T ss_pred eeeHHHHHHHHHHHHHHHH-HhcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCE
Confidence 5788888777766665444 3456 688888888875543 33568899999999887654 67788899999999988
Q ss_pred ccCcHHHHH
Q 009077 279 APFVPPIVL 287 (544)
Q Consensus 279 l~~~P~~l~ 287 (544)
++.......
T Consensus 103 ~i~~~~~~~ 111 (540)
T PRK13388 103 LVTDAEHRP 111 (540)
T ss_pred EEEChhhhH
Confidence 877655443
No 195
>PRK06188 acyl-CoA synthetase; Validated
Probab=51.67 E-value=1.9e+02 Score=30.00 Aligned_cols=85 Identities=9% Similarity=0.010 Sum_probs=63.5
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 130 (544)
..+|+..+...+... ....+++.++++....+-+-.+...+++.+..|+..+..+. ..+..+...++..++.++..
T Consensus 186 v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQ---LAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHH---HhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEe
Confidence 458888877655433 33457889999988888665555566778888988887765 56888999999999999998
Q ss_pred ecchhHHHH
Q 009077 131 QAVYNDKVR 139 (544)
Q Consensus 131 ~~~~~~~~~ 139 (544)
.+.....+.
T Consensus 262 ~P~~l~~l~ 270 (524)
T PRK06188 262 VPTMIYALL 270 (524)
T ss_pred hHHHHHHHH
Confidence 777655443
No 196
>PRK08308 acyl-CoA synthetase; Validated
Probab=51.67 E-value=1.9e+02 Score=28.79 Aligned_cols=98 Identities=8% Similarity=0.105 Sum_probs=67.4
Q ss_pred CCCccEEEeCCC-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHhhCCeEeecC
Q 009077 38 FADRPCIINGPT-------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (544)
Q Consensus 38 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (544)
.++.++++.-.. +..+|++.+...+..+... .++..++++...+|-. ..++..+++++..|+..+..+
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 455666643222 2568999988766555543 4567888887776644 334566788899999888775
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecchhHHHH
Q 009077 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (544)
Q Consensus 109 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 139 (544)
. .++..+...++..++.+++..+.....+.
T Consensus 176 ~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 205 (414)
T PRK08308 176 N-KNPKFALNILRNTPQHILYAVPLMLHILG 205 (414)
T ss_pred C-CCHHHHHHHHHHhCCeEEEcCHHHHHHHH
Confidence 4 56778888899999998888776655443
No 197
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=51.51 E-value=63 Score=34.83 Aligned_cols=87 Identities=9% Similarity=-0.032 Sum_probs=66.5
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~ 278 (544)
..+|.+.+...+......+. ..++.++|++...++-..- +....++++..|+..+... ....+.+...+++.++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIR-SRGVNPGDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 35788888877777666554 4578999999988886543 3356788999999988765 468889999999999999
Q ss_pred ccCcHHHHHHH
Q 009077 279 APFVPPIVLAV 289 (544)
Q Consensus 279 l~~~P~~l~~l 289 (544)
++.....+..+
T Consensus 153 v~~~~~~~~~~ 163 (660)
T PLN02861 153 AFVQESKISSI 163 (660)
T ss_pred EEECHHHHHHH
Confidence 88776655544
No 198
>PRK07514 malonyl-CoA synthase; Validated
Probab=51.50 E-value=88 Score=32.17 Aligned_cols=86 Identities=15% Similarity=0.119 Sum_probs=63.2
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~ 278 (544)
..+|...+...+......+. ..++.+++++....+-.. .....+++++..|+..+..+. .....+...++..+++.
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~-~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLV-ALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 35777777666665555444 357889999988887654 344667899999999887654 67888999999999988
Q ss_pred ccCcHHHHHH
Q 009077 279 APFVPPIVLA 288 (544)
Q Consensus 279 l~~~P~~l~~ 288 (544)
++..+.....
T Consensus 104 ii~~~~~~~~ 113 (504)
T PRK07514 104 VVCDPANFAW 113 (504)
T ss_pred EEEccchhHH
Confidence 8776655443
No 199
>PRK07638 acyl-CoA synthetase; Validated
Probab=51.44 E-value=1.9e+02 Score=29.63 Aligned_cols=85 Identities=8% Similarity=0.141 Sum_probs=61.9
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
-.+|.+.+...+...+ ...+++++|++....+-.-. ++...+..+..|+..+.. +..++..+...++..++.++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 4688888766554433 34578899999877654332 345667778889988866 457788899999999999999
Q ss_pred EecchhHHHH
Q 009077 130 TQAVYNDKVR 139 (544)
Q Consensus 130 ~~~~~~~~~~ 139 (544)
..+.....+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 9887765544
No 200
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=51.21 E-value=2.1e+02 Score=27.13 Aligned_cols=60 Identities=20% Similarity=0.105 Sum_probs=47.2
Q ss_pred cC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEec
Q 009077 72 LG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (544)
Q Consensus 72 ~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 132 (544)
.| +++|++|.= ...+---+...+.|...|..++.+-|...+.+...+|+..++.+++++.
T Consensus 56 ~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGGTIVE-ATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCCEEEE-cCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45 799994433 3333444666677888899999999988888899999999999999986
No 201
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=50.83 E-value=1.7e+02 Score=31.59 Aligned_cols=87 Identities=6% Similarity=-0.152 Sum_probs=65.6
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+. ..++.++|++...++-..- +....++++..|+..+... ...++.+...+.+.+++++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALR-ASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEE
Confidence 4688888777777666554 4578999999888876553 3356788889998887765 4688999999999999999
Q ss_pred cCcHHHHHHHH
Q 009077 280 PFVPPIVLAVA 290 (544)
Q Consensus 280 ~~~P~~l~~l~ 290 (544)
+.....+..++
T Consensus 153 ~~~~~~~~~~~ 163 (660)
T PLN02430 153 FVQDKKIKELL 163 (660)
T ss_pred EECHHHHHHHH
Confidence 88765444433
No 202
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=50.54 E-value=47 Score=34.56 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=70.2
Q ss_pred hhhhchHHHHHHHHHhhhcCCC-CccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccc
Q 009077 199 GVMLTHKGLVTSVAQQVDGENP-NLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKV 276 (544)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~ 276 (544)
+..+|+..+...+...+..+.. .+++.++|++....|-+..+. ...+++.+.|+.+...+ .++..++...++.-++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 6678888887777766665542 234788999999999766443 45778888898887765 4799999999999999
Q ss_pred eeccCcHHHHHHHHhc
Q 009077 277 TVAPFVPPIVLAVAKS 292 (544)
Q Consensus 277 t~l~~~P~~l~~l~~~ 292 (544)
.+++.....+..+.+.
T Consensus 121 kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISEA 136 (537)
T ss_pred eEEEEcCchHHHHHHH
Confidence 9999887777666443
No 203
>PRK07798 acyl-CoA synthetase; Validated
Probab=50.38 E-value=1e+02 Score=31.92 Aligned_cols=86 Identities=13% Similarity=-0.036 Sum_probs=62.4
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+. ..++.+++++....+-.. .+...+++++..|+..+..+. ...+.+...+++.++..+
T Consensus 28 ~~ty~el~~~~~~la~~L~-~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 28 RLTYAELEERANRLAHYLI-AQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 5778888777666665554 457888999888876443 344667888999999887654 678888899999888888
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+........+
T Consensus 105 ~~~~~~~~~~ 114 (533)
T PRK07798 105 VYEREFAPRV 114 (533)
T ss_pred EEchhhHHHH
Confidence 7766554443
No 204
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=50.30 E-value=1.3e+02 Score=28.64 Aligned_cols=67 Identities=18% Similarity=0.056 Sum_probs=49.2
Q ss_pred HHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch
Q 009077 67 AGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY 134 (544)
Q Consensus 67 ~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 134 (544)
....+.| +.+|++| +....+=.-..+.+++.+.|..+..+-|...+......++..++.+++++...
T Consensus 46 ~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 46 WDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 3344455 4777877 45555555666677888899998888887766677888999999999998653
No 205
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=50.24 E-value=1.6e+02 Score=32.13 Aligned_cols=94 Identities=9% Similarity=0.054 Sum_probs=63.8
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHhhCCeEeecC
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTAN 108 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~ 108 (544)
.++.+|++.-.+| -.+|++.+...+..+.. ..++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4566666432222 56999988776665543 3478899999888774 3445556788889999988766
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecch
Q 009077 109 PFYTPPEIAKQAIASKAKIIITQAVY 134 (544)
Q Consensus 109 ~~~~~~~l~~~l~~~~~~~vi~~~~~ 134 (544)
.......+...+.+.++..+...+..
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHH
Confidence 44445566677788888877765543
No 206
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=50.18 E-value=1.7e+02 Score=30.21 Aligned_cols=97 Identities=20% Similarity=0.134 Sum_probs=67.7
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--HHHHHHHHHhhCCeEeecC
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ--FVFAFLGASYIGATSTTAN 108 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~ 108 (544)
.++.++++.-..+ ..+|++.+...+.... ....+++++|++....+-... +...+++.+..|..++..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 4566776532222 5688888876554322 233578999998877764433 3345677788999888887
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecchhH
Q 009077 109 PFYTPPEIAKQAIASKAKIIITQAVYND 136 (544)
Q Consensus 109 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 136 (544)
+..+...+...+++.++..+...+....
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 264 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYA 264 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHH
Confidence 7677888999999999999998886443
No 207
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=49.76 E-value=1.5e+02 Score=24.54 Aligned_cols=97 Identities=14% Similarity=0.182 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHc---CCCCCCEEEEE-cCCCccH-HHHHHHHHhhCCeEeecCCCC-------CHHHHHHHHHhcC
Q 009077 57 DVELTSRKVAAGLSKL---GVQKGDVIMLL-LQNCPQF-VFAFLGASYIGATSTTANPFY-------TPPEIAKQAIASK 124 (544)
Q Consensus 57 el~~~~~~la~~L~~~---g~~~g~~V~i~-~~~~~~~-~~~~lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~~ 124 (544)
.|.+++..+-....+. ..-.|..|+.+ ..+|... +.-..|+.++|+.++.+++.. +..+....+...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 3445555555444432 24456666555 5577666 444578999999999998654 235666788888
Q ss_pred ceEEEEecchhHHHHHHHhhcCcEEEEeCC
Q 009077 125 AKIIITQAVYNDKVRDLSEHHGARIVTIDP 154 (544)
Q Consensus 125 ~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~ 154 (544)
++++++-......+.+.+....+.+|-...
T Consensus 95 ~D~iv~R~~~~~~~~~~a~~~~vPVINa~~ 124 (142)
T PF02729_consen 95 VDAIVIRHPSHGALEELAEHSSVPVINAGD 124 (142)
T ss_dssp CSEEEEEESSHHHHHHHHHHCSSEEEEEEE
T ss_pred hheEEEEeccchHHHHHHHhccCCeEcCcC
Confidence 888888877778888888777887775543
No 208
>PRK13391 acyl-CoA synthetase; Provisional
Probab=49.74 E-value=1.1e+02 Score=31.55 Aligned_cols=97 Identities=14% Similarity=0.062 Sum_probs=69.3
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++.+...++ ..+|...+...+......+. ..++.+++++....+-+.. +...+++++..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~-~~g~~~~~~V~v~~~~~~~--~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFR-SLGLKRGDHVAIFMENNLR--YLEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHhccEEecc
Confidence 4667776655432 24778888777666665554 3578889999888776554 335678899999998876
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~l 286 (544)
+. .....+...++..++..+...+...
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~ 107 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKL 107 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhH
Confidence 54 6788888899998888887766544
No 209
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=49.60 E-value=48 Score=35.71 Aligned_cols=81 Identities=19% Similarity=0.116 Sum_probs=63.2
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~ 278 (544)
..+|...+...+..+...+. ..++.++|++...+|..--. ...+++++..|+..+... .+..+.+...+++.++.+
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~ 189 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALR-ALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKL 189 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 35788888887777776665 45899999999999876533 356788889998877765 478889999999999888
Q ss_pred ccCcH
Q 009077 279 APFVP 283 (544)
Q Consensus 279 l~~~P 283 (544)
++...
T Consensus 190 li~~~ 194 (652)
T TIGR01217 190 LFTVD 194 (652)
T ss_pred EEEcc
Confidence 87643
No 210
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.18 E-value=66 Score=33.87 Aligned_cols=98 Identities=19% Similarity=0.146 Sum_probs=71.1
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++.+.. + -.+|...+...+......+. ..++.++|++....+-+.. ++..+++++..|+..+..
T Consensus 45 ~p~~~a~~~~-----~----~~~Ty~ql~~~~~~~A~~L~-~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 112 (573)
T PRK05605 45 FGDRPALDFF-----G----ATTTYAELGKQVRRAAAGLR-ALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEH 112 (573)
T ss_pred CCCCeEEEeC-----C----CcccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeec
Confidence 3566666542 1 14788888777776665554 4578899999988876554 346688899999998876
Q ss_pred c-CcCHHHHHHHHHhccceeccCcHHHHHHH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (544)
+ ....+.+...+++.++..++........+
T Consensus 113 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 113 NPLYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred CcCCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 5 47889999999999999988766654443
No 211
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=49.11 E-value=51 Score=34.14 Aligned_cols=85 Identities=16% Similarity=0.036 Sum_probs=63.4
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE-ccCcCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI-MQKFDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~-~~~~~~~~~~~~i~~~~~t~ 278 (544)
-.+|.+.+...+......+....+. ++|++...+|..-.. ...++++...|+.... ...+.++.+..-+.+-++.+
T Consensus 39 ~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~--~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~ 115 (528)
T COG0365 39 RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA--VIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKV 115 (528)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH--HHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCE
Confidence 5678888877777666655434557 999999999976643 3568888899988655 45689999999999888888
Q ss_pred ccCcHHHHH
Q 009077 279 APFVPPIVL 287 (544)
Q Consensus 279 l~~~P~~l~ 287 (544)
++.....++
T Consensus 116 vit~d~~~~ 124 (528)
T COG0365 116 LIADDGTFR 124 (528)
T ss_pred EEEeccccc
Confidence 775554443
No 212
>PRK05850 acyl-CoA synthetase; Validated
Probab=48.99 E-value=1e+02 Score=32.40 Aligned_cols=104 Identities=15% Similarity=0.111 Sum_probs=70.5
Q ss_pred CCCCEEEEecC-CCC-CCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 180 NPDDVVALPYS-SGT-TGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 180 ~~~~~~~i~~T-SGt-TG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
.|+.++++... ++. .|. ...+|+..+...+..+...+. ..+ .++|++...++-+. .+...+++++..|+.++
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~-~~g-~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~v 87 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELR-RHG-STGDRAVILAPQGL--EYIVAFLGALQAGLIAV 87 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHH-HhC-CCCCEEEEEcCCcc--cHHHHHHHHHHcCceEE
Confidence 45666665432 111 122 245788888776666655444 234 47899888888654 34467889999999999
Q ss_pred EccC----cCHHHHHHHHHhccceeccCcHHHHHHH
Q 009077 258 IMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (544)
Q Consensus 258 ~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (544)
..+. ...+.+...++..++..++..+.....+
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 8763 3567888999999999988877666554
No 213
>PRK13383 acyl-CoA synthetase; Provisional
Probab=48.72 E-value=72 Score=33.04 Aligned_cols=86 Identities=7% Similarity=0.011 Sum_probs=64.4
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++...++-+- .....+++++..|+..+..+. ...+.+...+++.++..+
T Consensus 60 ~lTy~el~~~~~~la~~L~-~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLT-RDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEE
Confidence 4677777766666665554 347889999988887443 334567889999999988664 688889999999999998
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+..+.+...+
T Consensus 137 i~~~~~~~~~ 146 (516)
T PRK13383 137 VADNEFAERI 146 (516)
T ss_pred EEchhHHHHH
Confidence 8877665544
No 214
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.62 E-value=59 Score=33.92 Aligned_cols=87 Identities=14% Similarity=0.083 Sum_probs=65.6
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|+..+...+......+...+++.+++++....+-+. .++..+++++..|+..+..+. .....+...+++.+++.+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 47788887777666655543347889999998887554 444678899999999887654 678889999999999998
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+..+.....+
T Consensus 113 i~~~~~~~~~ 122 (546)
T PRK08314 113 IVGSELAPKV 122 (546)
T ss_pred EEccchhhhH
Confidence 8777655544
No 215
>PRK09088 acyl-CoA synthetase; Validated
Probab=47.37 E-value=97 Score=31.74 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=66.4
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++......| ..+|...+...+......+. ..++.+++++...++-+.. +...+++++..|+..+..
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~-~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~~ 77 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLR-RRGCVDGERLAVLARNSVW--LVALHFACARVGAIYVPL 77 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEee
Confidence 4566666543333 25788888777666655444 4568899999888876554 335678899999988876
Q ss_pred c-CcCHHHHHHHHHhccceeccCcH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
+ ....+.+...+++.+++.++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEcc
Confidence 5 46788889999998888876544
No 216
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.94 E-value=97 Score=32.67 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=71.6
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..|+.++++.... ..-.+|...+...+......+....++.+++++...++-+.- .+..+++++..|+..+.
T Consensus 22 ~~~~~~a~~~~~~------~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e--~~~~~lA~~~~G~~~v~ 93 (576)
T PRK05620 22 VHGDTTVTTWGGA------EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAE--HLEVLFAVACMGAVFNP 93 (576)
T ss_pred hCCCceEEEEcCC------ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHH--HHHHHHHHHhcCCEEee
Confidence 3456666554211 123567888877766666555433578899999888876543 33567888999998887
Q ss_pred ccC-cCHHHHHHHHHhccceeccCcHHHHHHH
Q 009077 259 MQK-FDIVKLMELVQKYKVTVAPFVPPIVLAV 289 (544)
Q Consensus 259 ~~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (544)
.+. .....+...++..++..++..+.+...+
T Consensus 94 l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 94 LNKQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred cccccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 654 6788899999999999988877665544
No 217
>PLN03013 cysteine synthase
Probab=46.83 E-value=1.3e+02 Score=30.37 Aligned_cols=81 Identities=12% Similarity=0.044 Sum_probs=58.1
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
-.-++++ +-+..+-..+.+.| +++|....|....+=.-+.+.++|...|..++.+-|...+......++..++++++
T Consensus 149 PtGSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 149 PCCSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred CccccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 3455665 22333333334455 57886655666667677777888899999988888877888889999999999999
Q ss_pred Eecc
Q 009077 130 TQAV 133 (544)
Q Consensus 130 ~~~~ 133 (544)
+++.
T Consensus 227 v~~~ 230 (429)
T PLN03013 227 TDPA 230 (429)
T ss_pred ECCC
Confidence 9764
No 218
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.83 E-value=2e+02 Score=30.08 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=72.6
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC--CCccHHHHHHHHHhhCCeEeecC
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQ--NCPQFVFAFLGASYIGATSTTAN 108 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l~ 108 (544)
.|+.+|++.-.+| -.+|++.+...+..+...+... +++.|++...+| +..-+...+++.+..|...+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 4677787642222 5689999998876666665532 778888777776 44566777888899999998888
Q ss_pred C-CCCHHHHHHHHHhcCceEEEEecchhHHH
Q 009077 109 P-FYTPPEIAKQAIASKAKIIITQAVYNDKV 138 (544)
Q Consensus 109 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 138 (544)
+ .+....+...+...++..+..-+.....+
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~l 278 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLREL 278 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHH
Confidence 6 67888888888888877766666655543
No 219
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=46.37 E-value=98 Score=30.54 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=37.8
Q ss_pred HHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEEe
Q 009077 70 SKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIITQ 131 (544)
Q Consensus 70 ~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 131 (544)
...++++||.|.+-.+. +.....++...|+.++.++.. .+.+.+...+.. +.++|+..
T Consensus 64 ~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 33467899998775543 445566777889887777532 456777776654 56666543
No 220
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=45.98 E-value=99 Score=28.52 Aligned_cols=99 Identities=19% Similarity=0.296 Sum_probs=56.1
Q ss_pred eHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCC--CCCHHH---HHHHHHhcCceE
Q 009077 54 TYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP--FYTPPE---IAKQAIASKAKI 127 (544)
Q Consensus 54 Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~ 127 (544)
.++++.++...+...+.+.-- -++ +..+...+...++.-.|++-..+.. -+.+ ..++.+ +...++..++++
T Consensus 126 N~~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~h~~~~Y~~~~~gl~~~~~~--~~~~~~~ps~~~l~~l~~~ik~~~v~~ 202 (256)
T PF01297_consen 126 NAEKYLKELDELDAEIKEKLAKLPG-RPVVVYHDAFQYFAKRYGLKVIGVI--EISPGEEPSPKDLAELIKLIKENKVKC 202 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSG-GEEEEEESTTHHHHHHTT-EEEEEE--SSSSSSSS-HHHHHHHHHHHHHTT-SE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccC-CeEEEEChHHHHHHHhcCCceeeee--ccccccCCCHHHHHHHHHHhhhcCCcE
Confidence 345555555556565554311 233 5556666778777777765555444 1222 224444 445667889999
Q ss_pred EEEecchhHHHHH-HHhhcCcEEEEeCCC
Q 009077 128 IITQAVYNDKVRD-LSEHHGARIVTIDPP 155 (544)
Q Consensus 128 vi~~~~~~~~~~~-~~~~~~~~~v~~~~~ 155 (544)
||+++...+...+ ++...+.+++.++..
T Consensus 203 i~~e~~~~~~~~~~la~~~g~~vv~ld~l 231 (256)
T PF01297_consen 203 IFTEPQFSSKLAEALAKETGVKVVYLDPL 231 (256)
T ss_dssp EEEETTS-THHHHHHHHCCT-EEEESSTT
T ss_pred EEecCCCChHHHHHHHHHcCCcEEEeCCC
Confidence 9998876655444 445568888888765
No 221
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=45.52 E-value=2.6e+02 Score=27.64 Aligned_cols=63 Identities=24% Similarity=0.278 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC-----CCHHHHHHHHHhcCceEEE
Q 009077 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 129 (544)
..+...|...++++||.|.+-.+ .+.....++...|+.++.++.. .+.+.+...+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34445555667889998876543 3444455667789888776532 356677776653 456665
No 222
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=45.06 E-value=2.2e+02 Score=30.09 Aligned_cols=82 Identities=12% Similarity=-0.019 Sum_probs=58.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
..+|++.+...+..+... .+++++|++...+|-.- .++..+++.+..|+..+. .+..+...+...+...++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 568999988777665544 56889999988877543 334455566667776665 445677888888899999888
Q ss_pred EEecchhH
Q 009077 129 ITQAVYND 136 (544)
Q Consensus 129 i~~~~~~~ 136 (544)
...+....
T Consensus 293 ~~~p~l~~ 300 (600)
T PRK08279 293 QYIGELCR 300 (600)
T ss_pred eehHHHHH
Confidence 77655443
No 223
>PLN00011 cysteine synthase
Probab=44.98 E-value=1.6e+02 Score=28.38 Aligned_cols=67 Identities=12% Similarity=-0.035 Sum_probs=50.7
Q ss_pred HHHHHHcC-CCCC-CEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecc
Q 009077 66 AAGLSKLG-VQKG-DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (544)
Q Consensus 66 a~~L~~~g-~~~g-~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 133 (544)
.....+.| +.+| +.|.. ...+=.-..+.++|...|..+..+-|...+......++..+++++++++.
T Consensus 56 l~~a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 56 IKDAEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33444444 6777 55554 56666677778899999999888888777778888999999999998864
No 224
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=44.81 E-value=86 Score=37.37 Aligned_cols=100 Identities=13% Similarity=0.034 Sum_probs=68.2
Q ss_pred CCCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE
Q 009077 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI 258 (544)
Q Consensus 179 ~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~ 258 (544)
..|+.++++...+...+......+|+..+...+......+. ..++.+++++...++-+.. ++..+++++..|+.++.
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~-~~gv~~g~~V~i~~~~~~~--~i~~~lA~l~~G~~~vp 324 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLL-KTGIKRGDVVMIYAYRGVD--LVVAVMGVLKAGATFSV 324 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEecCCHH--HHHHHHHHHhhCcEEec
Confidence 35777877654322111112346788888777776665444 3478899999888886543 34678899999999888
Q ss_pred ccC-cCHHHHHHHHHhccceeccC
Q 009077 259 MQK-FDIVKLMELVQKYKVTVAPF 281 (544)
Q Consensus 259 ~~~-~~~~~~~~~i~~~~~t~l~~ 281 (544)
.+. ..++.+...++..++..++.
T Consensus 325 ldp~~p~~~~~~~l~~~~~~~li~ 348 (1389)
T TIGR03443 325 IDPAYPPARQTIYLSVAKPRALIV 348 (1389)
T ss_pred cCCCCcHHHHHHHHHhcCCCEEEE
Confidence 765 56777888888888776654
No 225
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=44.56 E-value=2.3e+02 Score=30.16 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=74.3
Q ss_pred ccCCCccEEEeCCC-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHhhCCeEee
Q 009077 36 SQFADRPCIINGPT-------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTT 106 (544)
Q Consensus 36 ~~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~ 106 (544)
...||..|.+--.+ |-.+||+-+...+..+...+. -++++|++..++|-+ .+.+.. +++...|.+.+.
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~-~~~~~~~g~~~~ 263 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFE-GGLALYGGVTVL 263 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHH-HHHHhhcceEEE
Confidence 46788888752221 367999999999888877776 378999999999944 344433 555555555555
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHH
Q 009077 107 ANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLS 142 (544)
Q Consensus 107 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 142 (544)
... +...+..-+...+|.+++.-+.....+....
T Consensus 264 ~~~--~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I 297 (613)
T COG1022 264 FKE--DPRTLLEDLKEVRPTVMIGVPRVWEKVYKGI 297 (613)
T ss_pred ecC--CHHHHHHHHHHhCCeEEeechHHHHHHHHHH
Confidence 544 6788999999999999999888777766544
No 226
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=44.09 E-value=1.6e+02 Score=31.32 Aligned_cols=103 Identities=15% Similarity=0.062 Sum_probs=70.6
Q ss_pred CCCCEEEEecC--CCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 180 NPDDVVALPYS--SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 180 ~~~~~~~i~~T--SGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
.++.++++... .+++|. ...+|...+...+..+...+... +.++|++...++-+. .++..+++++..|+..+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~--~~~gd~V~l~~~n~~--e~~~~~lA~~~aG~v~v 120 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQV--AGPGDRVAILAPQGI--DYVAGFFAAIKAGTIAV 120 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHh--cCCCCEEEEECCCCh--hHHHHHHHHHHcCceeE
Confidence 35667665432 112232 23578888877777666655432 688999998888664 34467889999999988
Q ss_pred Ec-cC-cC--HHHHHHHHHhccceeccCcHHHHHH
Q 009077 258 IM-QK-FD--IVKLMELVQKYKVTVAPFVPPIVLA 288 (544)
Q Consensus 258 ~~-~~-~~--~~~~~~~i~~~~~t~l~~~P~~l~~ 288 (544)
.. +. .. .+.+...+++.++..++..+.....
T Consensus 121 pl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 121 PLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred ecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 65 32 22 6788999999999998887765543
No 227
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=43.77 E-value=2.8e+02 Score=28.38 Aligned_cols=85 Identities=7% Similarity=-0.022 Sum_probs=62.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHhhCCeEeecCCC--CCHHHHHHHHHhcCceE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP-QFVFAFLGASYIGATSTTANPF--YTPPEIAKQAIASKAKI 127 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 127 (544)
..+|++.+...+..+.. ..++..++++....|-+. ..+..+++++..|+..+..++. .+...+...+...++..
T Consensus 159 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 56899998776654433 357788888887766543 2355678899999999988764 35677888888899998
Q ss_pred EEEecchhHHH
Q 009077 128 IITQAVYNDKV 138 (544)
Q Consensus 128 vi~~~~~~~~~ 138 (544)
+...+.....+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 88887765543
No 228
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=43.77 E-value=1.7e+02 Score=27.76 Aligned_cols=90 Identities=19% Similarity=0.052 Sum_probs=58.4
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 119 (544)
++.+-....+.+-++++ +.+..+...+.+.| +.+|+.|. ....+=.-..+.++|...|..++.+-|...+......
T Consensus 23 ~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~ 99 (299)
T TIGR01136 23 RVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKL 99 (299)
T ss_pred eEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 34444433334455554 22333333344445 36778764 4555656677778888899988888887766777788
Q ss_pred HHhcCceEEEEecc
Q 009077 120 AIASKAKIIITQAV 133 (544)
Q Consensus 120 l~~~~~~~vi~~~~ 133 (544)
++..++++++++..
T Consensus 100 ~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 100 LRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999998764
No 229
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=43.71 E-value=3.5e+02 Score=28.09 Aligned_cols=85 Identities=12% Similarity=-0.044 Sum_probs=61.4
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccH--H-HHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF--V-FAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKI 127 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 127 (544)
..+|.+.+...+..... ..++++++++...+|-.-.+ . ...++++..|+..+... ..+...+...++..++.+
T Consensus 200 V~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCcE
Confidence 56899998887665443 35688999998887754322 2 24688889999887654 346677788899999999
Q ss_pred EEEecchhHHHH
Q 009077 128 IITQAVYNDKVR 139 (544)
Q Consensus 128 vi~~~~~~~~~~ 139 (544)
+...+.....+.
T Consensus 276 ~~~~p~~~~~l~ 287 (536)
T PRK10946 276 TALVPPAVSLWL 287 (536)
T ss_pred EEeChHHHHHHH
Confidence 888877665544
No 230
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=43.66 E-value=3.7e+02 Score=27.43 Aligned_cols=59 Identities=12% Similarity=0.089 Sum_probs=36.0
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecC-CCCCHHHHHHHHHhcCceEEEEecch
Q 009077 75 QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTAN-PFYTPPEIAKQAIASKAKIIITQAVY 134 (544)
Q Consensus 75 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~vi~~~~~ 134 (544)
.+||+|++=-| +...+...+-..-+-.+.||++ -++..+.+...++..+++++.+.+.+
T Consensus 177 ~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 177 DPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 47777776544 2223333333333334444444 25678889998888889999887754
No 231
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=42.84 E-value=1.9e+02 Score=27.28 Aligned_cols=64 Identities=19% Similarity=0.129 Sum_probs=48.6
Q ss_pred HHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEec
Q 009077 68 GLSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (544)
Q Consensus 68 ~L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 132 (544)
...+.| +.+|+.|.. ...+-.-..+.++|.+.|..+..+-|...+......++..++++++++.
T Consensus 49 ~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 49 EAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 333445 477887655 5556666777788889999988888877777778899999999999875
No 232
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=42.69 E-value=3.5e+02 Score=26.83 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=61.4
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCC-------CceeeHHHHHHHHHHHHHHHHHcCCCC--CCEEEEEcCCCc--cHHHH
Q 009077 25 LPLHTYCFENISQFADRPCIINGPT-------GDVYTYADVELTSRKVAAGLSKLGVQK--GDVIMLLLQNCP--QFVFA 93 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~--g~~V~i~~~~~~--~~~~~ 93 (544)
..+.++++--.+.+-+..+++.-.+ +-.+|++.+...+..++..+ ++.+ .+++..++|-.- .++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~ 156 (386)
T TIGR02372 80 RRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFS 156 (386)
T ss_pred ccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHH
Confidence 3455555544444434455533222 25689999998888777655 4433 456777766442 33445
Q ss_pred HHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHH
Q 009077 94 FLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKV 138 (544)
Q Consensus 94 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 138 (544)
++..+..|+.++.... .++..+...++.. .+++..+.....+
T Consensus 157 ~l~~l~~G~~vv~~~~-~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 157 CLLPSRRGLEAKQLAA-APASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHHCCCeEEecCC-CChHHHHHhhccC--CEEEECcHHHHHH
Confidence 5667778988877654 4555444444322 4555656554443
No 233
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=42.63 E-value=2.6e+02 Score=27.60 Aligned_cols=66 Identities=23% Similarity=0.188 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCC-----CCCHHHHHHHHHh---cCceEEEEe
Q 009077 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP-----FYTPPEIAKQAIA---SKAKIIITQ 131 (544)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi~~ 131 (544)
..+...+...++++||.|.+-.+. +....-++...|+.++.++. ..+.+.+...++. .+.++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 444555555678899997776553 44445667788988776654 2466778777763 356666643
No 234
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=42.63 E-value=70 Score=34.20 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=69.1
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++... ..+|. .-.+|.+.+...+......+. ..++.++|++...+|..-. ....+++++..|+..+..
T Consensus 66 ~p~~~A~~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIAVS-TETDE--ERTYTFRQLHDEVNRMAAMLR-SLGVQRGDRVLIYMPMIAE--AAFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCcEEEee
Confidence 35666665432 11222 235788888777776666554 4589999999999886553 335688899999987765
Q ss_pred c-CcCHHHHHHHHHhccceeccCcH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P 283 (544)
. .+..+.+...+.+.++.+++...
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 4 57888899999999988887543
No 235
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=42.54 E-value=76 Score=33.25 Aligned_cols=97 Identities=15% Similarity=0.098 Sum_probs=67.7
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.++.++++.. | ..+|+..+...+......+....++.+++++...++-... +...+++++..|+..+..
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEecc
Confidence 3566666532 1 2467888876666655543223578899999888876543 345678899999999866
Q ss_pred c-CcCHHHHHHHHHhccceeccCcHHHHH
Q 009077 260 Q-KFDIVKLMELVQKYKVTVAPFVPPIVL 287 (544)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~ 287 (544)
+ .+....+...+.+.+++.++....+..
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~~ 135 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFGT 135 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhHH
Confidence 5 467888999999999988877655543
No 236
>PRK07787 acyl-CoA synthetase; Validated
Probab=42.40 E-value=3e+02 Score=27.97 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=60.1
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
-.+|++.+...+..++.. .++.+++++....|- ...+...+++.+..|+.++..+. .+...+...++ .++..+
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR-PTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC-CCHHHHHHHHh-hCceEE
Confidence 468999888766555543 467888988766553 23455668889999999987764 57788888888 888888
Q ss_pred EEecchhHHH
Q 009077 129 ITQAVYNDKV 138 (544)
Q Consensus 129 i~~~~~~~~~ 138 (544)
.+.+.....+
T Consensus 221 ~~~P~~~~~l 230 (471)
T PRK07787 221 FGVPTVWSRI 230 (471)
T ss_pred EcchHHHHHH
Confidence 8777655443
No 237
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=42.35 E-value=1.1e+02 Score=31.98 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=59.1
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.++|++...+|-+. .+...+++++..|+..+..+. ...+.+...++..++.++
T Consensus 49 ~~Ty~~l~~~v~~la~~l~-~~G~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 125 (547)
T PRK06087 49 SYTYSALDHAASRLANWLL-AKGIEPGDRVAFQLPGWC--EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMF 125 (547)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEE
Confidence 4688888777766665554 357899999998887654 334678899999998887654 677888888888888877
Q ss_pred cCc
Q 009077 280 PFV 282 (544)
Q Consensus 280 ~~~ 282 (544)
+..
T Consensus 126 ~~~ 128 (547)
T PRK06087 126 FAP 128 (547)
T ss_pred EEe
Confidence 553
No 238
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.10 E-value=3e+02 Score=27.29 Aligned_cols=104 Identities=15% Similarity=0.203 Sum_probs=62.9
Q ss_pred hchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceecc
Q 009077 202 LTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVAP 280 (544)
Q Consensus 202 ~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (544)
+|...+...+......+. .+++.++|.++..+|-.- .+...+++.+..|..-|+.- .....++-..++...++.+.
T Consensus 54 ~sY~eLdqr~d~LAa~l~-~lGi~~Gd~vlvQLpN~~--ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i 130 (542)
T COG1021 54 LSYAELDQRADRLAAGLR-RLGIKPGDTVLVQLPNVA--EFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLI 130 (542)
T ss_pred ccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCchH--HHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchhee
Confidence 677777666666555554 678999999999988543 45456777788888777643 22333343444443333322
Q ss_pred --------CcHHHHHHHHhcCCCCCCCCCCceEEEEecccCCH
Q 009077 281 --------FVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGK 315 (544)
Q Consensus 281 --------~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~l~~ 315 (544)
..-.+.+.+... .+++|++++.|+.=.+
T Consensus 131 ~~~~~~gFd~~~~ar~~~a~-------~~tlr~v~v~ge~~~~ 166 (542)
T COG1021 131 VARQHSGFDYRPFARELVAK-------HPTLRHVIVAGEAEHP 166 (542)
T ss_pred echhhcccCcHHHHHHHHhh-------CCcceEEEEccCCCCc
Confidence 222333333222 3688999988887533
No 239
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=41.57 E-value=3.9e+02 Score=27.10 Aligned_cols=95 Identities=21% Similarity=0.224 Sum_probs=58.8
Q ss_pred ceeeHHHHHHHHHHH--------------H-HHHHHcCCCCCCEEEEEcCCCccHHHHHHH-HHhhCCeEeec--C----
Q 009077 51 DVYTYADVELTSRKV--------------A-AGLSKLGVQKGDVIMLLLQNCPQFVFAFLG-ASYIGATSTTA--N---- 108 (544)
Q Consensus 51 ~~~Ty~el~~~~~~l--------------a-~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l--~---- 108 (544)
.+-||.+|.+.+..+ | +.|...++++||.| .+..++.+.-+ +...|++++=+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 456888888775433 3 33445689999977 44667777777 68888877766 2
Q ss_pred --------CCCCHHHHHHHHHhcCc------eEEEEec---------chhHHHHHHHhhcCcEEE
Q 009077 109 --------PFYTPPEIAKQAIASKA------KIIITQA---------VYNDKVRDLSEHHGARIV 150 (544)
Q Consensus 109 --------~~~~~~~l~~~l~~~~~------~~vi~~~---------~~~~~~~~~~~~~~~~~v 150 (544)
-.++.+.+...++...+ +++++.. .....+.++....++.++
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi 208 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVF 208 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEE
Confidence 23467888888875332 2333322 224556666666566554
No 240
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=41.54 E-value=4e+02 Score=27.15 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=57.9
Q ss_pred ceeeHHHHHHHHHHH--------------HHHH-HHcCCCCCCEEEEEcCCCccHHHHHHH-HHhhCCeEeec-------
Q 009077 51 DVYTYADVELTSRKV--------------AAGL-SKLGVQKGDVIMLLLQNCPQFVFAFLG-ASYIGATSTTA------- 107 (544)
Q Consensus 51 ~~~Ty~el~~~~~~l--------------a~~L-~~~g~~~g~~V~i~~~~~~~~~~~~lA-~~~~G~~~v~l------- 107 (544)
..-||.+|.+.+..+ |..| ...++++||.| .+..++.+.-| +...|++++=+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 445777777765533 3333 24588999965 44455666656 78888877733
Q ss_pred -------CCCCCHHHHHHHHHhcCc------eEEEEecc---------hhHHHHHHHhhcCcEEE
Q 009077 108 -------NPFYTPPEIAKQAIASKA------KIIITQAV---------YNDKVRDLSEHHGARIV 150 (544)
Q Consensus 108 -------~~~~~~~~l~~~l~~~~~------~~vi~~~~---------~~~~~~~~~~~~~~~~v 150 (544)
.-.++.+.++..++...+ +++++... ....+.++....+++++
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVF 215 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEE
Confidence 335678888888875432 34444331 34566666666666655
No 241
>PLN02550 threonine dehydratase
Probab=41.03 E-value=2.3e+02 Score=29.88 Aligned_cols=91 Identities=18% Similarity=0.184 Sum_probs=58.7
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 120 (544)
++.+-..+-+.+-+|++ ....+++.+ |......+| . +.+..+=....+.++|.+.|..++.+-|...+..-...+
T Consensus 125 ~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G-V--V~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~ 199 (591)
T PLN02550 125 KVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG-V--ICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSV 199 (591)
T ss_pred EEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC-E--EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 34444433234445665 233333433 322234555 3 335556666777889999999998888887777777888
Q ss_pred HhcCceEEEEecchhH
Q 009077 121 IASKAKIIITQAVYND 136 (544)
Q Consensus 121 ~~~~~~~vi~~~~~~~ 136 (544)
+..++.++++...+.+
T Consensus 200 r~~GAeVvl~g~~~de 215 (591)
T PLN02550 200 ERLGATVVLVGDSYDE 215 (591)
T ss_pred HHcCCEEEEeCCCHHH
Confidence 9999999999875443
No 242
>PRK06381 threonine synthase; Validated
Probab=40.94 E-value=1e+02 Score=29.57 Aligned_cols=89 Identities=15% Similarity=-0.023 Sum_probs=58.4
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 120 (544)
++.+-....+-+-|+++ +.+..+...+.+.|. ++| +....+-.-+.+.++|...|..++.+-|...+......+
T Consensus 32 ~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l 105 (319)
T PRK06381 32 KIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEM 105 (319)
T ss_pred eEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHH
Confidence 45555543344455555 222333333444442 444 445667666788889999999988877776667777899
Q ss_pred HhcCceEEEEecchh
Q 009077 121 IASKAKIIITQAVYN 135 (544)
Q Consensus 121 ~~~~~~~vi~~~~~~ 135 (544)
+..+++++++.....
T Consensus 106 ~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 106 EKYGAEIIYVDGKYE 120 (319)
T ss_pred HHcCCEEEEcCCCHH
Confidence 999999999987643
No 243
>PRK08162 acyl-CoA synthetase; Validated
Probab=40.70 E-value=86 Score=32.71 Aligned_cols=86 Identities=9% Similarity=0.071 Sum_probs=65.3
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++....+-+. .++..+++++..|+..+..+. .....+...++..+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~-~~g~~~g~~v~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALA-RRGIGRGDTVAVLLPNIP--AMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCch--HHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 4788888777776665554 347889999998888655 344668889999998877654 678889999999999998
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+..+.+...+
T Consensus 120 ~~~~~~~~~~ 129 (545)
T PRK08162 120 IVDTEFAEVA 129 (545)
T ss_pred EEccchhhHH
Confidence 8877665443
No 244
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=40.41 E-value=99 Score=32.39 Aligned_cols=85 Identities=11% Similarity=0.044 Sum_probs=63.9
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~ 278 (544)
..+|+.++...+..+...+. ..++.+++++...++-+.. ....+++++..|+..+..+. .....+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~-~~gi~~gd~V~i~~~n~~~--~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQ-SRGLAKGARVAIMMPNVLQ--YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 36788888877776666554 3478899999888776543 33567889999999987654 57888999999999999
Q ss_pred ccCcHHHHH
Q 009077 279 APFVPPIVL 287 (544)
Q Consensus 279 l~~~P~~l~ 287 (544)
++....+..
T Consensus 124 vi~~~~~~~ 132 (557)
T PRK07059 124 IVVLENFAT 132 (557)
T ss_pred EEEchhhHH
Confidence 877665543
No 245
>PRK10717 cysteine synthase A; Provisional
Probab=40.31 E-value=1.9e+02 Score=28.01 Aligned_cols=64 Identities=19% Similarity=0.083 Sum_probs=48.2
Q ss_pred HHHcC-CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecc
Q 009077 69 LSKLG-VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (544)
Q Consensus 69 L~~~g-~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 133 (544)
+.+.| +++|+.|.. ...+-.-..+.++|.+.|..+..+-|...++.....++..++++++++..
T Consensus 55 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33445 467777655 55566667777888899998888888777777888999999999998753
No 246
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=39.98 E-value=1.2e+02 Score=29.05 Aligned_cols=90 Identities=12% Similarity=0.058 Sum_probs=58.8
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 120 (544)
++.+-....+-.-++++- .+..+-..+.+.|..+++.|.... .+-.-..+.++|.+.|..++.+-|...+......+
T Consensus 17 ~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l 93 (316)
T cd06448 17 NVFLKLENLQPSGSFKIR--GIGHLCQKSAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKL 93 (316)
T ss_pred eEEEEeccCCCcCChHHH--HHHHHHHHHHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 455544433444556542 122222223333444566665554 45556677788999999999888888778888999
Q ss_pred HhcCceEEEEecc
Q 009077 121 IASKAKIIITQAV 133 (544)
Q Consensus 121 ~~~~~~~vi~~~~ 133 (544)
+..++++++++..
T Consensus 94 ~~~GA~v~~~~~~ 106 (316)
T cd06448 94 RDEGATVVVHGKV 106 (316)
T ss_pred HHcCCEEEEECCc
Confidence 9999999998765
No 247
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=39.86 E-value=3e+02 Score=27.90 Aligned_cols=48 Identities=8% Similarity=0.002 Sum_probs=19.2
Q ss_pred cCCCccHHH-HHHHHHhhCCeEeecCCCCC--HHHHHHHHHhcCceEEEEe
Q 009077 84 LQNCPQFVF-AFLGASYIGATSTTANPFYT--PPEIAKQAIASKAKIIITQ 131 (544)
Q Consensus 84 ~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~vi~~ 131 (544)
.+++...+. +++++++.|-.++.-++.+. ..-+...+...++++.+++
T Consensus 82 ~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd 132 (432)
T PRK06702 82 TASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN 132 (432)
T ss_pred ECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC
Confidence 444433333 23334444444444333332 1122223444555555554
No 248
>PRK07470 acyl-CoA synthetase; Validated
Probab=39.67 E-value=3.1e+02 Score=28.32 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=62.9
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecC-C
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTAN-P 109 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~-~ 109 (544)
.++.++++.-.++ ..+|++.+...+......+. .+..++|++..++|-+-.+-...+..+..|...+.++ .
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 3456666532222 46888888654333222111 2677889888888765443333333445566655444 4
Q ss_pred CCCHHHHHHHHHhcCceEEEEecchhHHHH
Q 009077 110 FYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (544)
Q Consensus 110 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 139 (544)
..+.+.+...++..++.++...+.....+.
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 567888999999999999999887766543
No 249
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=39.62 E-value=2.5e+02 Score=32.58 Aligned_cols=99 Identities=13% Similarity=0.081 Sum_probs=69.8
Q ss_pred cCCCccEEEeCCC-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHhhCCeEeec
Q 009077 37 QFADRPCIINGPT-------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN--CPQFVFAFLGASYIGATSTTA 107 (544)
Q Consensus 37 ~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~--~~~~~~~~lA~~~~G~~~v~l 107 (544)
..+++++.+.-.+ +..+|++.+...+..+.. ..++.++|++...+|- ...+....++.+..|+..+..
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~ 855 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYH 855 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEe
Confidence 3466777753222 256899988776655443 3467889988777663 233344467778889888877
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecchhHHH
Q 009077 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKV 138 (544)
Q Consensus 108 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 138 (544)
+...+...+...+++.++..+...+.....+
T Consensus 856 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 856 PDPTDALGIAKLVAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 7667888999999999999999988766544
No 250
>PRK05852 acyl-CoA synthetase; Validated
Probab=39.21 E-value=4e+02 Score=27.62 Aligned_cols=87 Identities=11% Similarity=0.120 Sum_probs=61.8
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHhhCCeEeec-CCCCCHHHHHHHHHhcCceE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTA-NPFYTPPEIAKQAIASKAKI 127 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ 127 (544)
..+|+..+...+..+...+ +++++|++....|-. ..++..+++++..|...+.- ....+...+...++..++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4589988877666655433 678899888777643 34556677787877765542 33456778888999999999
Q ss_pred EEEecchhHHHHH
Q 009077 128 IITQAVYNDKVRD 140 (544)
Q Consensus 128 vi~~~~~~~~~~~ 140 (544)
++..+.....+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9888887665543
No 251
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.12 E-value=2.3e+02 Score=30.35 Aligned_cols=102 Identities=10% Similarity=0.010 Sum_probs=66.9
Q ss_pred CCCCEEEEecC--CCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEE
Q 009077 180 NPDDVVALPYS--SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL 257 (544)
Q Consensus 180 ~~~~~~~i~~T--SGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 257 (544)
.++.++++... ++..|. ...+|.+.+...+..+...+... +.++|++...++-+. .+...+++++..|+.++
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~--~~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~v 107 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQV--TKPGDRVAILAPQNL--DYLIAFFGALYAGRIAV 107 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHh--cCCCCEEEEEcCCCh--HHHHHHHHHHHcCCEEE
Confidence 34566655432 112222 23578888877777666555432 688999988887654 33456788999999887
Q ss_pred Ec-cCc---CHHHHHHHHHhccceeccCcHHHHH
Q 009077 258 IM-QKF---DIVKLMELVQKYKVTVAPFVPPIVL 287 (544)
Q Consensus 258 ~~-~~~---~~~~~~~~i~~~~~t~l~~~P~~l~ 287 (544)
.. +.. ..+.+...+++.++..++.......
T Consensus 108 pl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 141 (631)
T PRK07769 108 PLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAE 141 (631)
T ss_pred eeCCCCccchHHHHHHHHHhCCCCEEEEChHHHH
Confidence 65 222 2567888899999988877765543
No 252
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=38.52 E-value=3.5e+02 Score=28.01 Aligned_cols=98 Identities=13% Similarity=0.025 Sum_probs=66.4
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccH--HH-HHHHHHhhCCeEeec
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF--VF-AFLGASYIGATSTTA 107 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~-~~lA~~~~G~~~v~l 107 (544)
.++++|++.-.++ ..+|.+.+........ ...++.++|++...+|..-.+ .. ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4566766532222 5689998877655433 345678899998887754322 22 367788889887765
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecchhHHHH
Q 009077 108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVR 139 (544)
Q Consensus 108 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 139 (544)
+ ...+..+...+++.++.++...+.....+.
T Consensus 258 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 258 P-DPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 4 456777888899999999998877665443
No 253
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=38.49 E-value=1.1e+02 Score=31.60 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=62.5
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++....|-.. .+...+++++..|+..+..+. .....+...++..+++.+
T Consensus 11 ~~Ty~el~~~~~~la~~l~-~~g~~~g~~V~v~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLA-ALGVRPGDCVALLMRNDF--AFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 4566777666555554443 457889999988877554 344678889999999887654 678889999999999998
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+........+
T Consensus 88 ~~~~~~~~~~ 97 (509)
T PRK12406 88 IAHADLLHGL 97 (509)
T ss_pred EEccchhhhh
Confidence 7766555544
No 254
>PRK07476 eutB threonine dehydratase; Provisional
Probab=38.16 E-value=2.2e+02 Score=27.34 Aligned_cols=52 Identities=13% Similarity=0.012 Sum_probs=41.6
Q ss_pred cCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh
Q 009077 84 LQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (544)
Q Consensus 84 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 135 (544)
...+=.-..+.++|.+.|..++.+-|...+......++..++++++++....
T Consensus 73 aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 73 ASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred ECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 3445556777889999999988888877777788889999999999986543
No 255
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=37.97 E-value=88 Score=32.87 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=61.4
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+....++.++|++...++-+. .+...+++++..|+..+..+. .....+...+++.++..+
T Consensus 49 ~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~--e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 49 TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVL--QYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 57888887777766665542346889999998877554 344678899999999887654 678889999999998888
Q ss_pred cCcHH
Q 009077 280 PFVPP 284 (544)
Q Consensus 280 ~~~P~ 284 (544)
+..+.
T Consensus 127 i~~~~ 131 (562)
T PRK12492 127 VYLNM 131 (562)
T ss_pred Eeccc
Confidence 76543
No 256
>PLN02479 acetate-CoA ligase
Probab=37.97 E-value=1.3e+02 Score=31.60 Aligned_cols=95 Identities=11% Similarity=0.105 Sum_probs=69.1
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++.+. +. ..+|...+...+......+. ..++.++|++....+-+- .++..+++++..|+..+..
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~-~~g~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l 100 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALA-KRSIGPGSTVAVIAPNIP--AMYEAHFGVPMAGAVVNCV 100 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCcH--HHHHHHHHHHhCCcEEEEe
Confidence 466666654 11 24678888777666665544 447899999998888544 3345678899999998876
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~l 286 (544)
+. .....+...+++.++..++..+.++
T Consensus 101 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 101 NIRLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred ccccCHHHHHHHHhhcCceEEEEchhhh
Confidence 64 6788899999999999988877654
No 257
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=37.80 E-value=3.2e+02 Score=24.88 Aligned_cols=67 Identities=18% Similarity=0.122 Sum_probs=47.6
Q ss_pred HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh
Q 009077 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (544)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 135 (544)
.+.+.|..++..|... ..+-.-..+.++|...|..++.+-|...+......++..+++++.++....
T Consensus 41 ~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~ 107 (244)
T cd00640 41 LAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFD 107 (244)
T ss_pred HHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 3444443245555554 335555677778888999988888877778888889999999999987643
No 258
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=37.62 E-value=3.1e+02 Score=27.76 Aligned_cols=55 Identities=13% Similarity=0.122 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC-----CCHHHHHHHHHhcCceEEEEe
Q 009077 73 GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF-----YTPPEIAKQAIASKAKIIITQ 131 (544)
Q Consensus 73 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 131 (544)
++++||.|.+-.+. +.....++...|+.+++++.. .+.+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 78899988765443 455556667788887766542 345666666543 45666654
No 259
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=37.14 E-value=52 Score=30.99 Aligned_cols=53 Identities=9% Similarity=0.014 Sum_probs=43.3
Q ss_pred ceeeHHHHHHH-----HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 51 DVYTYADVELT-----SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 51 ~~~Ty~el~~~-----~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
..+.|.++.+. ...+...|.+.|+.+++.|.++|.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45777787642 456777778889999999999999999999999999889975
No 260
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=37.11 E-value=1.2e+02 Score=20.36 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=30.7
Q ss_pred cHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHh
Q 009077 450 PAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISK 503 (544)
Q Consensus 450 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 503 (544)
...|++.|.++|+|..+.+-.... .+.|...+.. .+.+++.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~~~-------~v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLETK-------TVTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTT-------EEEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECCCC-------EEEEEEecCC-CCHHHHHHHHHH
Confidence 356899999999998877764222 2333334333 677888888765
No 261
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=37.10 E-value=1.7e+02 Score=30.48 Aligned_cols=81 Identities=19% Similarity=0.176 Sum_probs=59.6
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhcccee
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTV 278 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~ 278 (544)
..+|...+...+......+. ..++.+++++....+-+.. +...+++++..|+.++..+. ...+.+...++..+++.
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 128 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLA-RLGVGRGDVVSFQLPNRWE--FTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKV 128 (538)
T ss_pred ceecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeE
Confidence 35788888777666665544 4578899999988876543 33567889999998887653 57888888999988888
Q ss_pred ccCcH
Q 009077 279 APFVP 283 (544)
Q Consensus 279 l~~~P 283 (544)
++..+
T Consensus 129 li~~~ 133 (538)
T TIGR03208 129 FVVPS 133 (538)
T ss_pred EEEcc
Confidence 77644
No 262
>PRK13390 acyl-CoA synthetase; Provisional
Probab=37.00 E-value=2e+02 Score=29.59 Aligned_cols=94 Identities=19% Similarity=0.091 Sum_probs=65.3
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++.+... +| ..+|...+...+..+...+. ..++.++|++....+-+.. ....+++++..|+..+..
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~-~~gv~~gd~V~i~~~n~~~--~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLY-DAGLRTGDVVALLSDNSPE--ALVVLWAALRSGLYITAI 79 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEecc
Confidence 45666665432 12 25788888777776665544 3578899999888776553 345688899999988776
Q ss_pred cC-cCHHHHHHHHHhccceeccCcH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVP 283 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P 283 (544)
+. ..+..+...+...++..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASA 104 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcc
Confidence 54 6778888888888877765543
No 263
>PRK07867 acyl-CoA synthetase; Validated
Probab=36.88 E-value=1.3e+02 Score=31.38 Aligned_cols=86 Identities=8% Similarity=-0.038 Sum_probs=62.1
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+....+..+++++....+-.. .+...+++++..|+.++..+ ....+.+...+++.++..+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 47888887777666655543334677788877776433 34466889999999998765 4678889999999999998
Q ss_pred cCcHHHHHH
Q 009077 280 PFVPPIVLA 288 (544)
Q Consensus 280 ~~~P~~l~~ 288 (544)
+........
T Consensus 106 i~~~~~~~~ 114 (529)
T PRK07867 106 LTESAHAEL 114 (529)
T ss_pred EECHhHHHH
Confidence 887766543
No 264
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=36.77 E-value=1.4e+02 Score=30.67 Aligned_cols=86 Identities=16% Similarity=0.105 Sum_probs=61.8
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++....+-+.. ....+++++..|+..+..+. .....+...+++.+++.+
T Consensus 11 ~~ty~el~~~v~~~a~~L~-~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLR-ALGLREGDVVAILLENNPE--FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred EEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 4667777666665554443 3568899999998876643 33568889999999887654 677888889999998888
Q ss_pred cCcHHHHHHH
Q 009077 280 PFVPPIVLAV 289 (544)
Q Consensus 280 ~~~P~~l~~l 289 (544)
+..+.....+
T Consensus 88 i~~~~~~~~~ 97 (502)
T PRK08276 88 IVSAALADTA 97 (502)
T ss_pred EEccchhhHH
Confidence 7776555443
No 265
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=36.77 E-value=2.4e+02 Score=23.15 Aligned_cols=46 Identities=4% Similarity=-0.039 Sum_probs=34.5
Q ss_pred hhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceeccC
Q 009077 236 LFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVAPF 281 (544)
Q Consensus 236 ~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l~~ 281 (544)
-.|..|........-..|..++.... ..++++.+.+.++++.++..
T Consensus 14 D~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~l 60 (137)
T PRK02261 14 DCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILV 60 (137)
T ss_pred ChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 36777875555666667777777664 67899999999999987543
No 266
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=36.71 E-value=72 Score=24.37 Aligned_cols=53 Identities=8% Similarity=-0.088 Sum_probs=38.6
Q ss_pred ceeeHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 51 DVYTYADVELT----SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 51 ~~~Ty~el~~~----~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
..+.+.++.+. ...+...+..+++.+++.|.++|.++.....+...+...|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 34566665433 235666777778888999999999988877777888888864
No 267
>PRK06382 threonine dehydratase; Provisional
Probab=36.66 E-value=2.2e+02 Score=28.55 Aligned_cols=55 Identities=22% Similarity=0.201 Sum_probs=43.0
Q ss_pred EEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhH
Q 009077 82 LLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND 136 (544)
Q Consensus 82 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 136 (544)
+.+..+=....+.++|...|..++.+-|...+......++..+++++++......
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 3444455566778899999999888888877777788899999999998875443
No 268
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=36.42 E-value=65 Score=25.27 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 63 RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
..+...+...|+.+++.|.++|..+.....+...+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45666777888989999999999887777777777888864
No 269
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=36.30 E-value=1.3e+02 Score=32.70 Aligned_cols=88 Identities=9% Similarity=-0.070 Sum_probs=66.7
Q ss_pred hhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccce
Q 009077 199 GVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVT 277 (544)
Q Consensus 199 ~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t 277 (544)
...+|.+.+...+..+...+. ..++.++|++...++-+. .++...++++..|+..+... ....+.+...+.+.++.
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLA-ELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 457888988887777766655 568899999998888654 34456788888898876654 46788899999999999
Q ss_pred eccCcHHHHHHH
Q 009077 278 VAPFVPPIVLAV 289 (544)
Q Consensus 278 ~l~~~P~~l~~l 289 (544)
.++.....+..+
T Consensus 196 ~lv~~~~~~~~l 207 (700)
T PTZ00216 196 AIVCNGKNVPNL 207 (700)
T ss_pred EEEECHHHHHHH
Confidence 888776655444
No 270
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=36.02 E-value=4.4e+02 Score=26.08 Aligned_cols=54 Identities=17% Similarity=0.151 Sum_probs=46.1
Q ss_pred EEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh
Q 009077 82 LLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (544)
Q Consensus 82 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 135 (544)
++++-+=..+.+.||+.++|..+..+-|..++...-..++..++.+++..+...
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~d 171 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWD 171 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHH
Confidence 444455567888999999999999999999999999999999999999887654
No 271
>PRK06178 acyl-CoA synthetase; Validated
Probab=35.79 E-value=1.4e+02 Score=31.46 Aligned_cols=87 Identities=15% Similarity=0.075 Sum_probs=65.2
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++....+-+.. +...+++++..|+..+..+ ......+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLR-QRGVGAGDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCcH--HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 4788888777666655544 3478899999888876654 3356888889999887655 4678889999999999999
Q ss_pred cCcHHHHHHHH
Q 009077 280 PFVPPIVLAVA 290 (544)
Q Consensus 280 ~~~P~~l~~l~ 290 (544)
+..+.....+.
T Consensus 135 i~~~~~~~~l~ 145 (567)
T PRK06178 135 LALDQLAPVVE 145 (567)
T ss_pred EEccchHHHHH
Confidence 88877665443
No 272
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=35.75 E-value=3.6e+02 Score=31.34 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=66.8
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHhhCCeEeecC
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC--PQFVFAFLGASYIGATSTTAN 108 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~ 108 (544)
.|+.++.+.-.++ -.+|.+.+...+..... ..+++++|++...+|-. ..+...++..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 5666766532222 46899988776665554 34678899998887742 333455677788899888776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecchhHHH
Q 009077 109 PFYTPPEIAKQAIASKAKIIITQAVYNDKV 138 (544)
Q Consensus 109 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 138 (544)
.......+...+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555566677888889999888877655443
No 273
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=35.69 E-value=58 Score=23.54 Aligned_cols=40 Identities=18% Similarity=0.251 Sum_probs=34.1
Q ss_pred HHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEe
Q 009077 66 AAGLSK-LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (544)
Q Consensus 66 a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (544)
..+|.+ .|++.|+.++.+..+..|.+..+=|++++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 346665 5999999999999999999999999999986633
No 274
>PRK13382 acyl-CoA synthetase; Provisional
Probab=35.49 E-value=1.6e+02 Score=30.76 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=67.1
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++.. + -.+|...+...+..+...+. ..++.+++++...++-+. .+...+++++..|+..+..
T Consensus 56 ~p~~~a~~~~--~-------~~~Ty~el~~~~~~~A~~L~-~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~vpl 123 (537)
T PRK13382 56 CPDRPGLIDE--L-------GTLTWRELDERSDALAAALQ-ALPIGEPRVVGIMCRNHR--GFVEALLAANRIGADILLL 123 (537)
T ss_pred CCCCeEEEeC--C-------CeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEecCcH--HHHHHHHHHHHcCcEEEec
Confidence 4566666531 1 14777777666666555443 347889999988887544 3456788999999998887
Q ss_pred cC-cCHHHHHHHHHhccceeccCcHHHH
Q 009077 260 QK-FDIVKLMELVQKYKVTVAPFVPPIV 286 (544)
Q Consensus 260 ~~-~~~~~~~~~i~~~~~t~l~~~P~~l 286 (544)
+. .....+...+++.+++.++....+.
T Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (537)
T PRK13382 124 NTSFAGPALAEVVTREGVDTVIYDEEFS 151 (537)
T ss_pred CcccCHHHHHHHHHhcCCCEEEEchhhH
Confidence 64 5778888999999998887655443
No 275
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=35.33 E-value=2.2e+02 Score=28.92 Aligned_cols=89 Identities=16% Similarity=-0.020 Sum_probs=57.9
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 119 (544)
++.+-....+..-+++.= .+..+-....+.|. ++|+.|... ..+=.-..+.++|.+.|..+..+-|...+..-...
T Consensus 27 ~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 103 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDR--IALRMIEDAEASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDV 103 (454)
T ss_pred eEEEEEhhcCCCcchHHH--HHHHHHHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHH
Confidence 455544433333444432 22233333334454 778776554 55666677788999999998888887766777888
Q ss_pred HHhcCceEEEEec
Q 009077 120 AIASKAKIIITQA 132 (544)
Q Consensus 120 l~~~~~~~vi~~~ 132 (544)
++..+++++++..
T Consensus 104 ~~~~GA~v~~~~~ 116 (454)
T TIGR01137 104 LKALGAEIVRTPT 116 (454)
T ss_pred HHHCCCEEEEcCC
Confidence 9999999999875
No 276
>PTZ00297 pantothenate kinase; Provisional
Probab=35.16 E-value=2e+02 Score=34.16 Aligned_cols=101 Identities=16% Similarity=0.018 Sum_probs=74.8
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceec
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l 279 (544)
..+|.+.+...+......+. .+++.++|++...++-..- +....++++..|+..+... .....+...+.+.++.++
T Consensus 456 ~~lTY~El~~~V~~lAa~L~-~lGV~~GDrVaIls~N~~E--wvia~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvV 531 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLL-ALGVRPGDVIGVDCEASRN--IVILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVV 531 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEE
Confidence 35888888887777766665 5689999999888885543 3356778889998888764 356789999999999999
Q ss_pred cCcHHHHHHHHhcCCCCCCCCCCceEEEEec
Q 009077 280 PFVPPIVLAVAKSGDVDKYDMSSIRTVMSGA 310 (544)
Q Consensus 280 ~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G 310 (544)
++....+..+.+... +.++.+++-+
T Consensus 532 fv~~~~l~kl~~i~~------~~Lr~IIv~d 556 (1452)
T PTZ00297 532 FADRNSVAAILTCRS------RKLETVVYTH 556 (1452)
T ss_pred EEchhHHHHHHhhcc------cCCcEEEEEC
Confidence 988887776655321 2567776653
No 277
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=35.14 E-value=1.1e+02 Score=31.40 Aligned_cols=57 Identities=21% Similarity=0.261 Sum_probs=43.2
Q ss_pred CCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc----CcCHHHHHHHHHhccceeccCcHHH
Q 009077 224 LHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ----KFDIVKLMELVQKYKVTVAPFVPPI 285 (544)
Q Consensus 224 ~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~P~~ 285 (544)
..++|.++.--|.++.. +-..-..|..++-.+ +.+++.+.+.++++++..++.+|++
T Consensus 176 ~~pGd~v~vE~PtY~~~-----~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDPTYPGA-----LQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCCCcHHH-----HHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 56899999999987643 223334566666543 4689999999999999999999975
No 278
>PRK05939 hypothetical protein; Provisional
Probab=34.99 E-value=4.2e+02 Score=26.42 Aligned_cols=55 Identities=11% Similarity=0.085 Sum_probs=22.7
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 009077 74 VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (544)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 130 (544)
+++||.|.+.-+.-......+-++.+.|+.+..++.. +.+.+...+. -+.++|++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~-~~tklV~v 137 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIR-PNTRMVFV 137 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCC-CCCeEEEE
Confidence 4556655543322122222222334455555555442 3444444443 23444443
No 279
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=34.61 E-value=5.1e+02 Score=26.35 Aligned_cols=52 Identities=13% Similarity=0.047 Sum_probs=33.4
Q ss_pred HHHHcCCC--CCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCC-------CCCHHHHHHHHHh
Q 009077 68 GLSKLGVQ--KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP-------FYTPPEIAKQAIA 122 (544)
Q Consensus 68 ~L~~~g~~--~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~-------~~~~~~l~~~l~~ 122 (544)
.|...+.+ +|+.|. +.++ .+..+.-|+..+|+.++.+++ ..+.+.++..++.
T Consensus 140 aL~alr~~~~~gd~VI-~p~~--th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~ 200 (444)
T TIGR03531 140 CLSALRHKRPKAKYVI-WPRI--DQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEE 200 (444)
T ss_pred HHHHcCCcCCCCCEEE-EECc--ChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHh
Confidence 34444442 466554 3333 377888888888888887774 2366778877775
No 280
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=34.49 E-value=3.7e+02 Score=31.85 Aligned_cols=100 Identities=11% Similarity=0.003 Sum_probs=70.8
Q ss_pred CCCccEEEeCCC-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccH-HHHHHHHHhhCCeEeecCC
Q 009077 38 FADRPCIINGPT-------GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF-VFAFLGASYIGATSTTANP 109 (544)
Q Consensus 38 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~ 109 (544)
.|+.+|++.-.+ +-.+|.+.+....... ....+++++|++...++-+.+. +.-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWM---QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHH---HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 456666653222 2568888776554333 3345789999999988877655 4456788889999888765
Q ss_pred C--CCHHHHHHHHHhcCceEEEEecchhHHHHH
Q 009077 110 F--YTPPEIAKQAIASKAKIIITQAVYNDKVRD 140 (544)
Q Consensus 110 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 140 (544)
. .++..+...++..++.++...+.....+..
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~ 705 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVA 705 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 3 467889999999999999888876655443
No 281
>PRK12582 acyl-CoA synthetase; Provisional
Probab=34.16 E-value=99 Score=33.03 Aligned_cols=80 Identities=15% Similarity=0.042 Sum_probs=58.2
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cC-----HHHHHHHHHh
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FD-----IVKLMELVQK 273 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~-----~~~~~~~i~~ 273 (544)
-.+|...+...+......+. ..++.++|++...++-.. .+...+++++..|+..+..+. +. .+.+...+++
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALL-DLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHh
Confidence 35788888777776665543 457899999999888543 334668899999999887654 22 3788888888
Q ss_pred ccceeccCc
Q 009077 274 YKVTVAPFV 282 (544)
Q Consensus 274 ~~~t~l~~~ 282 (544)
.++..++..
T Consensus 156 ~~~~~vi~~ 164 (624)
T PRK12582 156 VKPRVVFAQ 164 (624)
T ss_pred cCCcEEEec
Confidence 888776654
No 282
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=34.10 E-value=2.3e+02 Score=26.26 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=54.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhhCCe---EeecCCCCCHHHHHHHHHhcCceEEEEecc-----hhHHHHHHHhhcCcE
Q 009077 77 GDVIMLLLQNCPQFVFAFLGASYIGAT---STTANPFYTPPEIAKQAIASKAKIIITQAV-----YNDKVRDLSEHHGAR 148 (544)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~ 148 (544)
+.++.+-.-+..+.+- .|..+|.. .+.+.+-.+.+.-..++++++++++|+-++ ...++ +++...+..
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi-~AA~~lgi~ 225 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKV-KAAEALGIN 225 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHH-HHHHHcCCc
Confidence 4555555555555554 67777765 788888888888899999999999999654 23444 455666888
Q ss_pred EEEeCCCC
Q 009077 149 IVTIDPPP 156 (544)
Q Consensus 149 ~v~~~~~~ 156 (544)
++.+.-+.
T Consensus 226 vivI~RP~ 233 (256)
T TIGR00715 226 VIRIARPQ 233 (256)
T ss_pred EEEEeCCC
Confidence 88886554
No 283
>KOG3212 consensus Uncharacterized conserved protein related to IojAP [Function unknown]
Probab=33.76 E-value=61 Score=27.81 Aligned_cols=87 Identities=11% Similarity=0.065 Sum_probs=58.6
Q ss_pred ceEEecCCCCCCCCCCCCHHHHHHhhhccCCCccEEEeCCCC----------ceeeHHHHHHHHHHHHHHHHHcCCCCCC
Q 009077 9 EFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTG----------DVYTYADVELTSRKVAAGLSKLGVQKGD 78 (544)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~----------~~~Ty~el~~~~~~la~~L~~~g~~~g~ 78 (544)
+--+++..|..-..++.++.+...--.+.+.+.++++.-.++ .-.+|+++...+..+...++...-+...
T Consensus 53 ep~~~~g~pesn~~Dh~~ve~vv~lLrdenadDVfVi~vpeem~y~dh~VIcSgrs~rhl~aiAe~lv~m~Kik~~kgd~ 132 (208)
T KOG3212|consen 53 EPSFSSGAPESNVSDHLTVEEVVKLLRDENADDVFVIPVPEEMFYADHTVICSGRSDRHLRAIAEALVYMAKIKSQKGDK 132 (208)
T ss_pred CCccccCCCCCChhhhhhHHHHHHHHHhcccCceEEEeccccceeeeeEEEEecCchHHHHHHHHHHHHHHHHhhcCCCc
Confidence 334555566666667777777777777788888888765433 2267889998888888888765333445
Q ss_pred EEEEEcCCCccHHHHHH
Q 009077 79 VIMLLLQNCPQFVFAFL 95 (544)
Q Consensus 79 ~V~i~~~~~~~~~~~~l 95 (544)
.|-+-.-.+-+|++.-+
T Consensus 133 hvriegk~s~dW~v~D~ 149 (208)
T KOG3212|consen 133 HVRIEGKQSSDWIVIDY 149 (208)
T ss_pred ccccccccCCCeEEEEe
Confidence 66666666777776544
No 284
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=33.19 E-value=1.6e+02 Score=20.26 Aligned_cols=34 Identities=15% Similarity=0.334 Sum_probs=26.2
Q ss_pred eeEEEecCcccccccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEc
Q 009077 387 GEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVD 435 (544)
Q Consensus 387 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgDl~~~~~~g~l~~~G 435 (544)
|.+|++-.+- ..|-|+..||...+...+.+++.+
T Consensus 25 G~vWlT~~g~---------------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGD---------------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCC---------------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 8999966531 167799999999998888777765
No 285
>PRK06060 acyl-CoA synthetase; Validated
Probab=33.10 E-value=1.5e+02 Score=32.20 Aligned_cols=82 Identities=17% Similarity=0.125 Sum_probs=60.1
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+. ..++.+++++...++-+.. ++..+++++..|+..+..+. .....+...+++.++.++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~-~~g~~~g~~V~i~~~~~~~--~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~v 106 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLR-NRGLSSGDRVLLCLPDSPD--LVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALV 106 (705)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEE
Confidence 3788888777666655444 4578899999988886554 33568889999998887654 567778888888888887
Q ss_pred cCcHHH
Q 009077 280 PFVPPI 285 (544)
Q Consensus 280 ~~~P~~ 285 (544)
+.....
T Consensus 107 i~~~~~ 112 (705)
T PRK06060 107 VTSDAL 112 (705)
T ss_pred EEchHH
Confidence 665443
No 286
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=32.96 E-value=2.3e+02 Score=23.96 Aligned_cols=53 Identities=23% Similarity=0.220 Sum_probs=31.9
Q ss_pred cHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCC-CCCHHHHHHHHHhcccC
Q 009077 450 PAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGS-KITEDEIKQYISKQVVF 507 (544)
Q Consensus 450 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~~ 507 (544)
...|.+.+.++|+|.++.++...+. .++++ .+..+. ....+++++.+.+.+..
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~----A~Vgv-~~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY----AYVGV-DLTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE----EEEEE-EcCCCcchhhHHHHHHHHHHHHHh
Confidence 3457788889999999999976542 33333 333222 22235666666655544
No 287
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=32.92 E-value=4.2e+02 Score=24.91 Aligned_cols=65 Identities=20% Similarity=0.073 Sum_probs=48.6
Q ss_pred HHHcCC-CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecch
Q 009077 69 LSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVY 134 (544)
Q Consensus 69 L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 134 (544)
+.+.|. ++|+.|.. ...+-.-..+.++|.+.|..++.+-|...+......++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 344453 46676655 566666777788999999998888777766777788899999999998754
No 288
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=32.87 E-value=3.1e+02 Score=24.16 Aligned_cols=91 Identities=16% Similarity=0.080 Sum_probs=0.0
Q ss_pred EEEEecchhhHHhhHHHHHHHHHhCcEEE-EccCcCHHHHHHHHHhccceeccCcH------HHHHHHHhcCCCCCCCCC
Q 009077 229 VILCVLPLFHIYSLNSVLLCALRVGAAIL-IMQKFDIVKLMELVQKYKVTVAPFVP------PIVLAVAKSGDVDKYDMS 301 (544)
Q Consensus 229 ~~~~~~p~~~~~g~~~~~~~~l~~g~~~v-~~~~~~~~~~~~~i~~~~~t~l~~~P------~~l~~l~~~~~~~~~~l~ 301 (544)
++.+.-.=.|..|........-..|-.++ +-....++.+.+.+.+.+++++..+- ..+..+.+..+... +.
T Consensus 88 v~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~--~~ 165 (197)
T TIGR02370 88 VCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG--YR 165 (197)
T ss_pred EEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC--CC
Q ss_pred CceEEEEecccCCHHHHHHH
Q 009077 302 SIRTVMSGAAPMGKELEDAV 321 (544)
Q Consensus 302 ~l~~~~~~G~~l~~~~~~~~ 321 (544)
.--.+++||.++.++..+.+
T Consensus 166 ~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 166 DSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred CCCEEEEEChhcCHHHHHHh
No 289
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.41 E-value=1.3e+02 Score=31.54 Aligned_cols=83 Identities=16% Similarity=0.170 Sum_probs=60.9
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+....++.+++++....+-.. .+...+++++..|+..+..+. ...+.+...+++.+++.+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL--QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 56788887776666655432346888999988876543 344667899999999987654 578889999999998888
Q ss_pred cCcHHH
Q 009077 280 PFVPPI 285 (544)
Q Consensus 280 ~~~P~~ 285 (544)
...+.+
T Consensus 126 i~~~~~ 131 (560)
T PRK08974 126 VIVSNF 131 (560)
T ss_pred EEeccc
Confidence 765543
No 290
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.12 E-value=1.5e+02 Score=30.83 Aligned_cols=84 Identities=10% Similarity=-0.084 Sum_probs=61.4
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++...+|-... ....+++++..|+.++..+ ...++.+...++..++..+
T Consensus 39 ~~Ty~el~~~~~~~a~~L~-~~g~~~~d~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALA-ALGVEPGDRVGTLAWNGYR--HLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYV 115 (539)
T ss_pred EeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEE
Confidence 3688888776666655544 3578899999988876543 3345788888999988765 4678888888998888887
Q ss_pred cCcHHHHH
Q 009077 280 PFVPPIVL 287 (544)
Q Consensus 280 ~~~P~~l~ 287 (544)
+..+.+..
T Consensus 116 ~~~~~~~~ 123 (539)
T PRK07008 116 LFDLTFLP 123 (539)
T ss_pred EEcchhHH
Confidence 77665543
No 291
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=31.52 E-value=2.5e+02 Score=23.76 Aligned_cols=85 Identities=18% Similarity=0.246 Sum_probs=57.0
Q ss_pred HHHhCcEEEEccCcCHHHHHHHHHhc-cceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEeccc-------CCHHHHHH
Q 009077 249 ALRVGAAILIMQKFDIVKLMELVQKY-KVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAP-------MGKELEDA 320 (544)
Q Consensus 249 ~l~~g~~~v~~~~~~~~~~~~~i~~~-~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~-------l~~~~~~~ 320 (544)
.+..|.++++-.+.....+.+.+.+. +++++.-.......|.+. +..+.++.||+. ..+...+.
T Consensus 16 ~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~~ 87 (161)
T PF00455_consen 16 LIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALEA 87 (161)
T ss_pred hCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHHH
Confidence 34455666666666777788888777 788887777777777655 356778888843 44556666
Q ss_pred HHHHCCCCceeccccccccCc
Q 009077 321 VRAKLPHAKLGQGYGMTEAGP 341 (544)
Q Consensus 321 ~~~~~~~~~v~~~yG~tE~~~ 341 (544)
+++...+.-++..-|..+.++
T Consensus 88 l~~~~~d~afi~~~gi~~~~G 108 (161)
T PF00455_consen 88 LRQFRFDKAFIGADGISEEGG 108 (161)
T ss_pred HHhhccceEEecccEecCCCc
Confidence 666544667777777776443
No 292
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.48 E-value=1.8e+02 Score=30.36 Aligned_cols=83 Identities=16% Similarity=0.052 Sum_probs=60.9
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+..+...+. ..++.+++++....+-... ++..+++++..|+..+..+. .....+...+++.++..+
T Consensus 42 ~~ty~~l~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 42 TTTWRELDDRVAALAGALS-RRGVGFGDRVLILMLNRTE--FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEE
Confidence 5788888776666555444 3468889999888775443 34668889999999887654 577888889999888888
Q ss_pred cCcHHHH
Q 009077 280 PFVPPIV 286 (544)
Q Consensus 280 ~~~P~~l 286 (544)
+..+...
T Consensus 119 i~~~~~~ 125 (542)
T PRK07786 119 VTEAALA 125 (542)
T ss_pred EEccchH
Confidence 7665544
No 293
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=31.47 E-value=1.8e+02 Score=30.09 Aligned_cols=76 Identities=16% Similarity=0.095 Sum_probs=58.7
Q ss_pred eeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcC--CCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 53 YTYADVELTSRKVAA-GLSKLGVQKGDVIMLLLQ--NCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 53 ~Ty~el~~~~~~la~-~L~~~g~~~g~~V~i~~~--~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
+|+...+ ..|. ...-.|+++.|.|-+.+| ++...++-+-+|+..|+++| +....+...+-.-..++++.++-
T Consensus 262 ith~r~~----~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 262 ITHLRYL----QGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHH----HHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 5554444 3455 344568999999999988 88899999999999999977 66778888888888888888776
Q ss_pred Eecc
Q 009077 130 TQAV 133 (544)
Q Consensus 130 ~~~~ 133 (544)
+-.+
T Consensus 337 YIGE 340 (649)
T KOG1179|consen 337 YIGE 340 (649)
T ss_pred hHHH
Confidence 5433
No 294
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=31.03 E-value=3.7e+02 Score=23.67 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=0.0
Q ss_pred CCCeEEEEecc-hhhHHhhHHHHHHHHHhCcEEE-EccCcCHHHHHHHHHhccceeccCcH------HHHHHHHhcCCCC
Q 009077 225 HKEDVILCVLP-LFHIYSLNSVLLCALRVGAAIL-IMQKFDIVKLMELVQKYKVTVAPFVP------PIVLAVAKSGDVD 296 (544)
Q Consensus 225 ~~~~~~~~~~p-~~~~~g~~~~~~~~l~~g~~~v-~~~~~~~~~~~~~i~~~~~t~l~~~P------~~l~~l~~~~~~~ 296 (544)
....+++.+.+ =.|..|........-..|-.++ +.....++.+.+.+.+.+++++..+- ..+..+.+..+..
T Consensus 81 ~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~ 160 (201)
T cd02070 81 KKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEA 160 (201)
T ss_pred CCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHC
Q ss_pred CCCCCCceEEEEecccCCHHHHHHH
Q 009077 297 KYDMSSIRTVMSGAAPMGKELEDAV 321 (544)
Q Consensus 297 ~~~l~~l~~~~~~G~~l~~~~~~~~ 321 (544)
. ...--.+++||..++++..+.+
T Consensus 161 ~--~~~~~~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 161 G--LRDKVKVMVGGAPVNQEFADEI 183 (201)
T ss_pred C--CCcCCeEEEECCcCCHHHHHHc
No 295
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=30.86 E-value=1.3e+02 Score=31.30 Aligned_cols=83 Identities=7% Similarity=-0.090 Sum_probs=60.6
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++....+-...+ ...+++++..|+..+..+. ...+.+...++..++..+
T Consensus 39 ~~Ty~el~~~v~~la~~L~-~~g~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALD-RDGIKLGDRVATIAWNTWRH--LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVV 115 (542)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHH--HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEE
Confidence 4688888776666665444 35788999998887755433 3457788889999887654 678889999999888888
Q ss_pred cCcHHHH
Q 009077 280 PFVPPIV 286 (544)
Q Consensus 280 ~~~P~~l 286 (544)
+....+.
T Consensus 116 ~~~~~~~ 122 (542)
T PRK06018 116 ITDLTFV 122 (542)
T ss_pred EEccccH
Confidence 7655443
No 296
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=30.63 E-value=1.4e+02 Score=25.93 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=33.9
Q ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 009077 50 GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGA 97 (544)
Q Consensus 50 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 97 (544)
+..+||+|+.+.+.++|..+.+. +.....+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 45699999999999999999985 222334556666666666666654
No 297
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=30.62 E-value=4.8e+02 Score=24.80 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=49.8
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc----------------------------HHHHHHHHHhhCCeEe
Q 009077 54 TYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ----------------------------FVFAFLGASYIGATST 105 (544)
Q Consensus 54 Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~----------------------------~~~~~lA~~~~G~~~v 105 (544)
.+.++.+....+...++++|+ ...|.|...+.-. ..+-.+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~--d~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGL--DRVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---SCEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCC--CcEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 455566777888899998866 3555555444322 3556788999999999
Q ss_pred ecCCCCCH--HHHHHHHHhcCceEEEEecc
Q 009077 106 TANPFYTP--PEIAKQAIASKAKIIITQAV 133 (544)
Q Consensus 106 ~l~~~~~~--~~l~~~l~~~~~~~vi~~~~ 133 (544)
-..|+... ..+..+.++.+.- +..++
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvp--i~GdD 232 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVP--IAGDD 232 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEE--EEESS
T ss_pred eccCccccCCHHHHHHHHHcCCC--eecch
Confidence 99888765 7777777765543 44444
No 298
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.57 E-value=3.2e+02 Score=25.72 Aligned_cols=97 Identities=14% Similarity=0.203 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCC--CCCHHH---HHHHHHhcCceEEE
Q 009077 55 YADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP--FYTPPE---IAKQAIASKAKIII 129 (544)
Q Consensus 55 y~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~vi 129 (544)
++++.+..+.+-..+++.--....+..+...+...+++-.|++-..+.. -+.+ ..++.+ +...++..+.++||
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~If 233 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVF--TIDPEIDPGAKRLAKIRKEIKEKGATCVF 233 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeee--cCCCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 3444444444444444321112345555566677777766655433321 1222 234554 44566678999999
Q ss_pred EecchhHHHHH-HHhhcCcEEEEeC
Q 009077 130 TQAVYNDKVRD-LSEHHGARIVTID 153 (544)
Q Consensus 130 ~~~~~~~~~~~-~~~~~~~~~v~~~ 153 (544)
+.+...+...+ +....+.+++.++
T Consensus 234 ~e~~~~~~~~~~ia~~~g~~v~~l~ 258 (286)
T cd01019 234 AEPQFHPKIAETLAEGTGAKVGELD 258 (286)
T ss_pred ecCCCChHHHHHHHHhcCceEEEec
Confidence 98876654443 4444455555444
No 299
>PRK08813 threonine dehydratase; Provisional
Probab=30.00 E-value=4.6e+02 Score=25.63 Aligned_cols=83 Identities=11% Similarity=0.023 Sum_probs=54.6
Q ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEE
Q 009077 50 GDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIII 129 (544)
Q Consensus 50 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 129 (544)
+.+-||++--.. ..+. .+.+.|...+ .+....+=.-+.+.++|...|..+..+-|...+......++.+++.++.
T Consensus 58 nptGSfK~RgA~-~~l~-~a~~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~ 132 (349)
T PRK08813 58 QRTGSYKVRGAL-NALL-AGLERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQ 132 (349)
T ss_pred CCcCCCHHHHHH-HHHH-HHHHcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEE
Confidence 355666653222 2223 3333443322 3555666667788889999999888777777777778888999999999
Q ss_pred EecchhHH
Q 009077 130 TQAVYNDK 137 (544)
Q Consensus 130 ~~~~~~~~ 137 (544)
+...+.+.
T Consensus 133 ~g~~~~~a 140 (349)
T PRK08813 133 HGNSYDEA 140 (349)
T ss_pred ECCCHHHH
Confidence 97665443
No 300
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=29.92 E-value=5.2e+02 Score=25.03 Aligned_cols=32 Identities=13% Similarity=0.000 Sum_probs=14.3
Q ss_pred HHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEE
Q 009077 97 ASYIGATSTTANPFYTPPEIAKQAIASKAKIIIT 130 (544)
Q Consensus 97 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 130 (544)
...-|-.++.-+|.+. ......+..+++++-+
T Consensus 96 l~~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~v 127 (351)
T PRK14807 96 FINKGDVVIYPHPSFA--MYSVYSKIAGAVEIPV 127 (351)
T ss_pred hcCCCCEEEEeCCChH--HHHHHHHHcCCeEEEe
Confidence 3344544444455443 2333444455554444
No 301
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=29.74 E-value=3.6e+02 Score=27.69 Aligned_cols=73 Identities=12% Similarity=0.250 Sum_probs=46.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCC--CHH---HHHHHHHhcCceEEEEecchhHH---HHHHHhhcCcEE
Q 009077 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY--TPP---EIAKQAIASKAKIIITQAVYNDK---VRDLSEHHGARI 149 (544)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~--~~~---~l~~~l~~~~~~~vi~~~~~~~~---~~~~~~~~~~~~ 149 (544)
.+..+...+...++.--|++-..|.. -+++.. ++. .+...++..++++||.++..... +..++.+.+.++
T Consensus 371 ~r~vvt~H~af~YLa~~YGL~~~~~~--~~~~~~ePS~~~L~~Li~~IK~~~V~~IF~Epq~~~~~~~l~~IA~e~Gv~V 448 (479)
T TIGR03772 371 RRHLITTHDAYSYLGQAYGLNIAGFV--TPNPAVEPSLADRRRLTRTIENLKVPAVFLEPNLAARSTTLNEIADELGVRV 448 (479)
T ss_pred CCEEEEECCcHHHHHHHCCCeEEeee--ccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCchHHHHHHHHHcCCcE
Confidence 45666666688888877776666532 234333 333 45566677899999999877533 566666666665
Q ss_pred EEe
Q 009077 150 VTI 152 (544)
Q Consensus 150 v~~ 152 (544)
+.+
T Consensus 449 ~~l 451 (479)
T TIGR03772 449 CAI 451 (479)
T ss_pred Eee
Confidence 443
No 302
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=29.45 E-value=1.3e+02 Score=32.02 Aligned_cols=96 Identities=15% Similarity=0.034 Sum_probs=66.3
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.|+.++++... ..|. ...+|...+...+......+. ..++.+++++...++-+.. +...+++++..|+.++..
T Consensus 52 ~p~~~a~~~~~--~~~~--~~~~Ty~el~~~v~~~A~~L~-~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl 124 (614)
T PRK08180 52 APDRVFLAERG--ADGG--WRRLTYAEALERVRAIAQALL-DRGLSAERPLMILSGNSIE--HALLALAAMYAGVPYAPV 124 (614)
T ss_pred CCCCceeeecc--CCCc--eeEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCeEeee
Confidence 35666655431 1121 245788888777776666554 4578999999988876553 345688999999999887
Q ss_pred cC-cC-----HHHHHHHHHhccceeccCc
Q 009077 260 QK-FD-----IVKLMELVQKYKVTVAPFV 282 (544)
Q Consensus 260 ~~-~~-----~~~~~~~i~~~~~t~l~~~ 282 (544)
+. .. ..++...+++.++..++..
T Consensus 125 ~~~~~~~~~~~~~l~~~l~~~~~~~li~~ 153 (614)
T PRK08180 125 SPAYSLVSQDFGKLRHVLELLTPGLVFAD 153 (614)
T ss_pred ccccccccCCHHHHHHHHhcCCCcEEEEc
Confidence 64 33 5788888888888877664
No 303
>PF01175 Urocanase: Urocanase; InterPro: IPR023637 Urocanase [] (also known as imidazolonepropionate hydrolase or urocanate hydratase) is the enzyme that catalyzes the second step in the degradation of histidine, the hydration of urocanate into imidazolonepropionate. urocanate + H2O = 4,5-dihydro-4-oxo-5-imidazolepropanoate Urocanase is found in some bacteria (gene hutU), in the liver of many vertebrates and has also been found in the plant Trifolium repens (white clover). Urocanase is a protein of about 60 Kd, it binds tightly to NAD+ and uses it as an electrophil cofactor. A conserved cysteine has been found to be important for the catalytic mechanism and could be involved in the binding of the NAD+. This enzyme is a symmetric homodimer with tightly bound NAD+ cofactors. Each subunit consists of a typical NAD-binding domain inserted into a larger core domain that forms the dimer interface []. This entry represents the Urocanase subunit structural domain.; GO: 0016153 urocanate hydratase activity; PDB: 2V7G_A 1UWK_A 1UWL_B 1W1U_B 2FKN_C 1X87_B.
Probab=29.30 E-value=4.3e+02 Score=27.08 Aligned_cols=188 Identities=13% Similarity=0.108 Sum_probs=88.4
Q ss_pred HHHHhhhccCCCccEEEeCCCCceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEee
Q 009077 29 TYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSK--LGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTT 106 (544)
Q Consensus 29 ~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~--~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~ 106 (544)
+-|+...+.+|+...+--+.+.-.-.|.++...++-|...=.+ +=++.|..|+++-.+.
T Consensus 26 NNLDpeVAe~P~eLVvYGG~GkaarNW~~~~~i~~~L~~l~~deTLvvqSG~Pvglf~th~------------------- 86 (546)
T PF01175_consen 26 NNLDPEVAEYPEELVVYGGNGKAARNWEQYDLIVKYLKELEDDETLVVQSGKPVGLFPTHP------------------- 86 (546)
T ss_dssp HHT-TTT-SBGGGTEEETTTEESSSSHHHHHHHHHHHHH--TTEEEEEETTEEEEEEE--T-------------------
T ss_pred hCCChhHhCChhhEEEEcCcchhhcCHHHHHHHHHHHHhcCCcceEEEEcCCceeeccCCC-------------------
Confidence 3445556788987766443333557888887765544332222 1346667777765542
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeCCCCCCCccHHHHHhhccCCCCCccCCCCCCEEE
Q 009077 107 ANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVA 186 (544)
Q Consensus 107 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (544)
..|+++++.....+.+... ..|.++...+-. .|
T Consensus 87 ----------------~APRVliaN~~lVp~wa~~------------------e~f~~l~~~Glt-------------mY 119 (546)
T PF01175_consen 87 ----------------DAPRVLIANSNLVPNWATW------------------EHFERLEALGLT-------------MY 119 (546)
T ss_dssp ----------------TS-SEEEEESEB-GGGGSH------------------HHHHHHHHTT----------------B
T ss_pred ----------------CCCeEEEEcCcccCCCCCH------------------HHHHHHHhccch-------------hh
Confidence 4567888776554432211 122222111111 11
Q ss_pred EecCCCCCC--CCchhhhc-hHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcC
Q 009077 187 LPYSSGTTG--LPKGVMLT-HKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFD 263 (544)
Q Consensus 187 i~~TSGtTG--~pk~v~~t-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~ 263 (544)
=..|-||-- .|.+|++. ...+.+..+. .++-+-.-+++....+..+.|. ..+++-.+|+..++.+ .+
T Consensus 120 GQMTAGsw~YIG~QGIvqGTyeT~~~aark-------~~g~~L~Gk~~lTaGLGGMgGA--QplA~~m~g~v~l~vE-vd 189 (546)
T PF01175_consen 120 GQMTAGSWIYIGPQGIVQGTYETFLNAARK-------HFGGDLAGKLFLTAGLGGMGGA--QPLAATMAGGVGLIVE-VD 189 (546)
T ss_dssp -TTTTTTT---TTHHHHHHHHHHHHHHHHH-------HSTTS-TT-EEEEE--STTCCH--HHHHHHHTT-EEEEEE-S-
T ss_pred ccccccceEEEcccceeehhhHHHHHHHHH-------hcCCCCcceEEEEecccccccc--hHHHHHhcCceEEEEE-EC
Confidence 123444431 35565543 3333333332 2333445567777777777664 5666777777776654 45
Q ss_pred HHHHHHHHHhccceeccCcHHHHHHHHhc
Q 009077 264 IVKLMELVQKYKVTVAPFVPPIVLAVAKS 292 (544)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 292 (544)
+..+.+-+++--++...-...-...+.+.
T Consensus 190 ~~ri~kR~~~g~ld~~~~~ldea~~~~~e 218 (546)
T PF01175_consen 190 PSRIEKRLEQGYLDEVTDDLDEALARAKE 218 (546)
T ss_dssp HHHHHHHHHTTSSSEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeeEEcCCHHHHHHHHHH
Confidence 66666666665555555544444444433
No 304
>PLN02356 phosphateglycerate kinase
Probab=29.29 E-value=3e+02 Score=27.67 Aligned_cols=67 Identities=13% Similarity=-0.023 Sum_probs=48.3
Q ss_pred HHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEec
Q 009077 65 VAAGLSKLGV-QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQA 132 (544)
Q Consensus 65 la~~L~~~g~-~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 132 (544)
+-..+.+.|. ++|..|. ....+=.-+.+.++|...|..++.+-|...+..-...++..+++++.++.
T Consensus 91 ~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 91 IIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 3334444454 4777655 33444447777889999999988888877777778899999999999853
No 305
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=29.05 E-value=1.5e+02 Score=25.49 Aligned_cols=53 Identities=23% Similarity=0.256 Sum_probs=33.4
Q ss_pred CcHHHHHHHHcCCCcceeEEEeeeCCCCCceEEEEEEecCCCCCCHHHHHHHHHhcccC
Q 009077 449 APAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVF 507 (544)
Q Consensus 449 ~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~ 507 (544)
....|++.+.++++|.++.|+...+ ..++++- +.. .....+++++.+++.+..
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~----~a~Vav~-~~~-~~~~~~~i~~~V~~~v~~ 128 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDD----NAYVAVD-LDF-NRFNTKKIKKKVEKAVKS 128 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECC----EEEEEEE-ecc-cccchhHHHHHHHHHHHH
Confidence 3456888899999999999997654 3344443 332 134445666666555533
No 306
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=28.87 E-value=1.1e+02 Score=26.23 Aligned_cols=78 Identities=10% Similarity=0.101 Sum_probs=49.8
Q ss_pred hCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEeccc-CCHHHHHHHHHHCCCCce
Q 009077 252 VGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAP-MGKELEDAVRAKLPHAKL 330 (544)
Q Consensus 252 ~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~-l~~~~~~~~~~~~~~~~v 330 (544)
..+.++++++.....+.+.+ ..++..-..-+.++..+++..... ..+..++||.+ .-.+..+.+++.+|+.++
T Consensus 4 ~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~i 77 (172)
T PF03808_consen 4 NSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLRI 77 (172)
T ss_pred HhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeEE
Confidence 45666777766666666666 445534445666777777665432 34677888754 334667788888888887
Q ss_pred ecccc
Q 009077 331 GQGYG 335 (544)
Q Consensus 331 ~~~yG 335 (544)
...|-
T Consensus 78 vg~~~ 82 (172)
T PF03808_consen 78 VGYHH 82 (172)
T ss_pred EEecC
Confidence 65443
No 307
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=28.79 E-value=97 Score=27.16 Aligned_cols=34 Identities=9% Similarity=0.192 Sum_probs=29.5
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLL 84 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~ 84 (544)
.-+||.++.+.+..+|..+.+-|.+|.-.|++.-
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaR 38 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIAR 38 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcC
Confidence 4589999999999999999998998887777653
No 308
>PRK09192 acyl-CoA synthetase; Validated
Probab=28.61 E-value=2.3e+02 Score=29.93 Aligned_cols=87 Identities=10% Similarity=0.007 Sum_probs=62.3
Q ss_pred hhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-c-------CHHHHHHHH
Q 009077 200 VMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-F-------DIVKLMELV 271 (544)
Q Consensus 200 v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~-------~~~~~~~~i 271 (544)
-.+|...+...+......+. ..++.+++++...++-+- .++..+++++..|+..+..+. . ..+++...+
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~-~~gi~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i 124 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLL-ALGLKPGDRVALIAETDG--DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGML 124 (579)
T ss_pred EEecHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCch--hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHH
Confidence 45778888766666655544 457899999999888644 334567889999999888742 1 157888999
Q ss_pred HhccceeccCcHHHHHHH
Q 009077 272 QKYKVTVAPFVPPIVLAV 289 (544)
Q Consensus 272 ~~~~~t~l~~~P~~l~~l 289 (544)
+..++..++........+
T Consensus 125 ~~~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 125 ASAQPAAIITPDELLPWV 142 (579)
T ss_pred HhcCCCEEEeChHHHHHH
Confidence 999999887766554333
No 309
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=28.32 E-value=63 Score=22.81 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=14.5
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 009077 65 VAAGLSKLGVQKGDVIMLL 83 (544)
Q Consensus 65 la~~L~~~g~~~g~~V~i~ 83 (544)
+=..|.+.|++.||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 3445666799999999875
No 310
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=28.03 E-value=6.6e+02 Score=25.57 Aligned_cols=84 Identities=6% Similarity=0.003 Sum_probs=60.6
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccH-HHHHHHHHhhCCeEeecCCC--CCHHHHHHHHHhcCceE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQF-VFAFLGASYIGATSTTANPF--YTPPEIAKQAIASKAKI 127 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 127 (544)
..+|++.+...+...+.. .++..++++....+-+... +..+++++..|...+..+.. .+...+...++..++..
T Consensus 161 v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~ 237 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINV 237 (503)
T ss_pred EEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeE
Confidence 568999988766655544 5677888887777654332 45566788899988877754 35677788888899988
Q ss_pred EEEecchhHH
Q 009077 128 IITQAVYNDK 137 (544)
Q Consensus 128 vi~~~~~~~~ 137 (544)
+...+.....
T Consensus 238 ~~~~p~~~~~ 247 (503)
T PRK04813 238 WVSTPSFADM 247 (503)
T ss_pred EEeChHHHHH
Confidence 8887776544
No 311
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=27.90 E-value=92 Score=29.98 Aligned_cols=52 Identities=12% Similarity=0.146 Sum_probs=42.2
Q ss_pred eeeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 52 VYTYADVELT------SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 52 ~~Ty~el~~~------~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.+.|.++.+. ...+...+.++|+.+++.|.++|..+.....+++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667776543 466777788889999999999999999888888999899975
No 312
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=27.33 E-value=3.8e+02 Score=25.64 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCC--CHHH---HHHHHHhcCceEEE
Q 009077 55 YADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY--TPPE---IAKQAIASKAKIII 129 (544)
Q Consensus 55 y~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~--~~~~---l~~~l~~~~~~~vi 129 (544)
++++.++.+.+-..+++.--....+..+...+...++.--|++-..|.. -+.+.. ++.+ +...++..++++||
T Consensus 180 ~~~~~~~L~~l~~~~~~~l~~~~~~~~i~~H~af~Yf~~~ygl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~If 257 (311)
T PRK09545 180 LKDFEAQLAQTDKQIGNQLAPVKGKGYFVFHDAYGYFEKHYGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATCVF 257 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCcEEEECchHHHHHHhCCCceeeee--ccCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 3334444444444444321111233444555577777777766655532 233333 4455 44556678999999
Q ss_pred EecchhHHHH-HHHhhcCcEEEEeC
Q 009077 130 TQAVYNDKVR-DLSEHHGARIVTID 153 (544)
Q Consensus 130 ~~~~~~~~~~-~~~~~~~~~~v~~~ 153 (544)
+.+...+... .+..+.+.+++.++
T Consensus 258 ~e~~~~~~~~~~la~e~g~~v~~ld 282 (311)
T PRK09545 258 AEPQFRPAVIESVAKGTSVRMGTLD 282 (311)
T ss_pred ecCCCChHHHHHHHHhcCCeEEEec
Confidence 9988766544 44444566665554
No 313
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=27.24 E-value=5.3e+02 Score=24.24 Aligned_cols=55 Identities=22% Similarity=0.228 Sum_probs=36.8
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC----------CCHHHHHHHHHh-cCceEEEEe
Q 009077 74 VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF----------YTPPEIAKQAIA-SKAKIIITQ 131 (544)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~----------~~~~~l~~~l~~-~~~~~vi~~ 131 (544)
+++||.|.+.-+. +.....++...|+.++.+++. .+.+.+...++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~---h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNC---HKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCc---hHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5789998877543 334455667789888777553 457788888865 456765554
No 314
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.20 E-value=1.6e+02 Score=30.83 Aligned_cols=82 Identities=13% Similarity=0.056 Sum_probs=59.4
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEcc-CcCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQ-KFDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++...++-+.. +...+++++..|+..+..+ .+....+...++..+++.+
T Consensus 49 ~~ty~eL~~~~~~la~~L~-~~gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQ-KLGVEKGDRVAIMLPNCPQ--AVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVI 125 (563)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChH--HHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEE
Confidence 4677777666665554443 3467889999988876554 3356888899998888765 4677888899999988888
Q ss_pred cCcHHH
Q 009077 280 PFVPPI 285 (544)
Q Consensus 280 ~~~P~~ 285 (544)
+..+.+
T Consensus 126 i~~~~~ 131 (563)
T PRK06710 126 LCLDLV 131 (563)
T ss_pred EEeccc
Confidence 776543
No 315
>PRK05638 threonine synthase; Validated
Probab=27.09 E-value=2.3e+02 Score=28.78 Aligned_cols=91 Identities=15% Similarity=0.069 Sum_probs=55.6
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 120 (544)
++.+-....+-+-||++=- ....+...+ +.| .+.|+. ...+=.-..+...|.+.|..+..+-|...+..-...+
T Consensus 81 ~l~~K~E~~nPtGSfKdR~-a~~~i~~a~-~~g---~~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~ 154 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDRL-ATVAVSYGL-PYA---ANGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQM 154 (442)
T ss_pred eEEEEeCCCCCCCChHHHH-HHHHHHHHH-HcC---CCEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 4555444334566676621 122222222 332 345544 4555555666677788998887777766667777889
Q ss_pred HhcCceEEEEecchhHH
Q 009077 121 IASKAKIIITQAVYNDK 137 (544)
Q Consensus 121 ~~~~~~~vi~~~~~~~~ 137 (544)
+..+++++.++....+.
T Consensus 155 ~~~GA~vi~v~~~~~~~ 171 (442)
T PRK05638 155 IAFGAKIIRYGESVDEA 171 (442)
T ss_pred HhcCcEEEEECCCHHHH
Confidence 99999999997665443
No 316
>PRK11823 DNA repair protein RadA; Provisional
Probab=26.79 E-value=4.8e+02 Score=26.54 Aligned_cols=82 Identities=13% Similarity=0.102 Sum_probs=50.9
Q ss_pred cCCCCCCEEEEEcCCCc--cHHHHHHHHHh--hCCeEeecCCCCCHHHHHHHHHhcCc---eEEEEecchhHHHHHHHhh
Q 009077 72 LGVQKGDVIMLLLQNCP--QFVFAFLGASY--IGATSTTANPFYTPPEIAKQAIASKA---KIIITQAVYNDKVRDLSEH 144 (544)
Q Consensus 72 ~g~~~g~~V~i~~~~~~--~~~~~~lA~~~--~G~~~v~l~~~~~~~~l~~~l~~~~~---~~vi~~~~~~~~~~~~~~~ 144 (544)
-|+.+|..+.+..+++. -.++.++|... .|..++.++...+.+++....+..+. ++.+........+.+....
T Consensus 75 GGi~~Gs~~lI~G~pG~GKTtL~lq~a~~~a~~g~~vlYvs~Ees~~qi~~ra~rlg~~~~~l~~~~e~~l~~i~~~i~~ 154 (446)
T PRK11823 75 GGLVPGSVVLIGGDPGIGKSTLLLQVAARLAAAGGKVLYVSGEESASQIKLRAERLGLPSDNLYLLAETNLEAILATIEE 154 (446)
T ss_pred CCccCCEEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccccHHHHHHHHHHcCCChhcEEEeCCCCHHHHHHHHHh
Confidence 38999999999999875 44555555544 37778888877777777665554432 2334444444444444444
Q ss_pred cCcEEEEeC
Q 009077 145 HGARIVTID 153 (544)
Q Consensus 145 ~~~~~v~~~ 153 (544)
...+++++|
T Consensus 155 ~~~~lVVID 163 (446)
T PRK11823 155 EKPDLVVID 163 (446)
T ss_pred hCCCEEEEe
Confidence 455666665
No 317
>smart00467 GS GS motif. Aa approx. 30 amino acid motif that precedes the kinase domain in types I and II TGF beta receptors. Mutation of two or more of the serines or threonines in the TTSGSGSG of TGF-beta type I receptor impairs phosphorylation and signaling activity.
Probab=26.78 E-value=33 Score=19.60 Aligned_cols=14 Identities=50% Similarity=0.660 Sum_probs=10.3
Q ss_pred CCCC-CCCCchhhhc
Q 009077 190 SSGT-TGLPKGVMLT 203 (544)
Q Consensus 190 TSGt-TG~pk~v~~t 203 (544)
|||| +|.|-.+..|
T Consensus 11 tSGSGSG~p~LvqRT 25 (30)
T smart00467 11 TSGSGSGLPLLVQRT 25 (30)
T ss_pred cCCCCCCchhHHHHH
Confidence 8888 6888777554
No 318
>PRK12483 threonine dehydratase; Reviewed
Probab=26.45 E-value=4.1e+02 Score=27.70 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=45.8
Q ss_pred EEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHH
Q 009077 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (544)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 137 (544)
.|.+..+=....+.++|...|..++.+-|...+..-...++..++.++++...+.+.
T Consensus 88 VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a 144 (521)
T PRK12483 88 VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDA 144 (521)
T ss_pred EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHH
Confidence 345555667788889999999999988888877777888999999999998765443
No 319
>PRK08246 threonine dehydratase; Provisional
Probab=26.26 E-value=5.2e+02 Score=24.68 Aligned_cols=59 Identities=17% Similarity=0.176 Sum_probs=45.0
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh
Q 009077 76 KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (544)
Q Consensus 76 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 135 (544)
+++.|... ..+=.-..+.++|.+.|..+..+-|...++.....++..++++++++....
T Consensus 67 ~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 125 (310)
T PRK08246 67 PAAGVVAA-SGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYA 125 (310)
T ss_pred cCCeEEEe-CCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHH
Confidence 45665444 446666777888999999888887777777778899999999999986543
No 320
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.18 E-value=5.7e+02 Score=26.52 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=59.7
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCC-CEEEEEcCCC--ccHHHHHHHHHhhCCeEeec
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQKG-DVIMLLLQNC--PQFVFAFLGASYIGATSTTA 107 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g-~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l 107 (544)
.++.++++.-..+ ..+|++.+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 3566666532222 56999998776554433 3466666 7887776643 34455566778889988877
Q ss_pred CCCC---CHHHHHHHHHhcCceEEEEecc
Q 009077 108 NPFY---TPPEIAKQAIASKAKIIITQAV 133 (544)
Q Consensus 108 ~~~~---~~~~l~~~l~~~~~~~vi~~~~ 133 (544)
.+.. .+..+..++++.++..+.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 255 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNF 255 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchH
Confidence 6532 4556678889999987654333
No 321
>PRK05414 urocanate hydratase; Provisional
Probab=25.92 E-value=7.4e+02 Score=25.50 Aligned_cols=32 Identities=19% Similarity=0.048 Sum_probs=20.8
Q ss_pred CCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 226 KEDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 226 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
-.-+++....+..+.|. ..+++-.+|+..+..
T Consensus 165 L~G~~~lTaGLGGMgGA--QPlA~~mag~v~i~v 196 (556)
T PRK05414 165 LAGRLVLTAGLGGMGGA--QPLAATMAGAVCLAV 196 (556)
T ss_pred CceeEEEEecCCccccc--cHHHHHhcCceEEEE
Confidence 34567777778777765 455666666666653
No 322
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=25.80 E-value=2.1e+02 Score=22.52 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC-CccHHHHHHHHHhhCCe
Q 009077 63 RKVAAGLSKLGVQKGDVIMLLLQN-CPQFVFAFLGASYIGAT 103 (544)
Q Consensus 63 ~~la~~L~~~g~~~g~~V~i~~~~-~~~~~~~~lA~~~~G~~ 103 (544)
..+.+.+...|+.++..|.++|.. +.....+...+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 345556677789999999999988 47776777777888865
No 323
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=25.70 E-value=3.6e+02 Score=25.28 Aligned_cols=74 Identities=16% Similarity=0.279 Sum_probs=42.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhhCCeEeecCC--CCCHHH---HHHHHHhcCceEEEEecchhHHHH-HHHhhcCcEEE
Q 009077 77 GDVIMLLLQNCPQFVFAFLGASYIGATSTTANP--FYTPPE---IAKQAIASKAKIIITQAVYNDKVR-DLSEHHGARIV 150 (544)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~vi~~~~~~~~~~-~~~~~~~~~~v 150 (544)
+..+. ...+...+++-.|++-..|.. -+.+ ..++.+ +...++..+.++||+++...+... .++...+.+++
T Consensus 171 ~~~~v-~~H~af~Y~~~~~gl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~ 247 (282)
T cd01017 171 GKTFV-TQHAAFGYLARRYGLKQIAIV--GVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAKLL 247 (282)
T ss_pred CCeEE-EecccHHHHHHHCCCeEEecc--cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCcEE
Confidence 44444 444577666666655444421 1222 224444 445667789999999988765444 44445566666
Q ss_pred EeC
Q 009077 151 TID 153 (544)
Q Consensus 151 ~~~ 153 (544)
.++
T Consensus 248 ~ld 250 (282)
T cd01017 248 VLN 250 (282)
T ss_pred Eec
Confidence 554
No 324
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=25.58 E-value=3.7e+02 Score=24.98 Aligned_cols=60 Identities=22% Similarity=0.264 Sum_probs=36.6
Q ss_pred HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe-EeecCCCCCHHHHHHHHHhcCceEEEEe
Q 009077 68 GLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT-STTANPFYTPPEIAKQAIASKAKIIITQ 131 (544)
Q Consensus 68 ~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 131 (544)
.+...+..+|++|+|+..-.+-.+++++|- ..|+. ++.++. +.+. ..+++..++..++..
T Consensus 112 al~~~~~~~g~~VlV~G~G~vG~~~~~~ak-~~G~~~Vi~~~~--~~~r-~~~a~~~Ga~~~i~~ 172 (280)
T TIGR03366 112 ALEAAGDLKGRRVLVVGAGMLGLTAAAAAA-AAGAARVVAADP--SPDR-RELALSFGATALAEP 172 (280)
T ss_pred HHHhccCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HHHHHHcCCcEecCc
Confidence 344556679999999976556666666654 45775 444443 3333 345566677666543
No 325
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=25.55 E-value=6.9e+02 Score=25.03 Aligned_cols=58 Identities=17% Similarity=0.094 Sum_probs=45.0
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeec--CCCCCHHHHHHHHHhcCceEEEEe
Q 009077 74 VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA--NPFYTPPEIAKQAIASKAKIIITQ 131 (544)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi~~ 131 (544)
-=.|-+|+.+.+-.++..+.+..+...|+-+..- +|..+.++....|...+..+.-..
T Consensus 29 pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~ 88 (406)
T TIGR00936 29 PLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWR 88 (406)
T ss_pred CCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEec
Confidence 3468899999988888888888888888876655 777777888888887777765544
No 326
>PRK10595 SOS cell division inhibitor; Provisional
Probab=25.48 E-value=3.5e+02 Score=23.01 Aligned_cols=37 Identities=22% Similarity=0.037 Sum_probs=23.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCC
Q 009077 66 AAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGA 102 (544)
Q Consensus 66 a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 102 (544)
+.+|.+.|+..+..+.|...+..+.+.++-=|++.|.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~ 106 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGN 106 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCC
Confidence 4566666776666666655666666666666666664
No 327
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=25.35 E-value=55 Score=20.85 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=19.8
Q ss_pred eEEEEecccCCHHHHHHHHHHC
Q 009077 304 RTVMSGAAPMGKELEDAVRAKL 325 (544)
Q Consensus 304 ~~~~~~G~~l~~~~~~~~~~~~ 325 (544)
+.+.++|.|++.+....++..|
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHH
Confidence 5688999999999999999887
No 328
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=25.35 E-value=1.4e+02 Score=27.38 Aligned_cols=68 Identities=15% Similarity=0.028 Sum_probs=51.1
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCC--HHHHHHHHHh-cCceEEEEecc
Q 009077 66 AAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYT--PPEIAKQAIA-SKAKIIITQAV 133 (544)
Q Consensus 66 a~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~-~~~~~vi~~~~ 133 (544)
--.+.+...-||.-=.+.+|++..+++.--++.-++.+-||++|+++ .+.+...++. +.+++++..+.
T Consensus 99 ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSP 169 (375)
T KOG0633|consen 99 IDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSP 169 (375)
T ss_pred HHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCC
Confidence 33445555678866667788899999988999999999999999764 5667777765 47888887543
No 329
>PRK09224 threonine dehydratase; Reviewed
Probab=25.17 E-value=5.5e+02 Score=26.62 Aligned_cols=91 Identities=13% Similarity=0.179 Sum_probs=57.7
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 120 (544)
++.+-..+.+.+-+|+. ....+.++. |.+...++| .|.+..+=....+.++|.+.|..++.+-|...+..-...+
T Consensus 36 ~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~~~~~~g---vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~ 110 (504)
T PRK09224 36 QVLLKREDLQPVFSFKL-RGAYNKMAQ-LTEEQLARG---VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAV 110 (504)
T ss_pred EEEEEecCCCCCCCChH-HHHHHHHHh-hhHHhcCCE---EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 45554443344556665 222333333 332111222 3444566667788899999999988888877777777788
Q ss_pred HhcCceEEEEecchhH
Q 009077 121 IASKAKIIITQAVYND 136 (544)
Q Consensus 121 ~~~~~~~vi~~~~~~~ 136 (544)
+..+++++++...+..
T Consensus 111 r~~GA~Vi~~g~~~~~ 126 (504)
T PRK09224 111 RAFGGEVVLHGDSFDE 126 (504)
T ss_pred HhCCCEEEEECCCHHH
Confidence 9999999999865443
No 330
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=25.04 E-value=68 Score=22.62 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHcCCCCCCEEEE
Q 009077 61 TSRKVAAGLSKLGVQKGDVIML 82 (544)
Q Consensus 61 ~~~~la~~L~~~g~~~g~~V~i 82 (544)
+...+-..|.+.|++.||.|-|
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 41 KKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHTTHHHHHHTTT--TT-EEEE
T ss_pred HHCCHHHHHHHcCCCCCCEEEE
Confidence 3444556677789999999987
No 331
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=24.97 E-value=2.9e+02 Score=25.22 Aligned_cols=83 Identities=16% Similarity=0.166 Sum_probs=49.9
Q ss_pred CcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCCceEEEEeccc-------CCHHHHHHHHHHC
Q 009077 253 GAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAP-------MGKELEDAVRAKL 325 (544)
Q Consensus 253 g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~l~~~~~~G~~-------l~~~~~~~~~~~~ 325 (544)
|.++++-.+.+...+.+.+.....|++.-.+.....|... +..+.+++||+. ..+...+.+++..
T Consensus 94 gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~~l~~~~ 165 (240)
T PRK10411 94 GMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLISQLKSLE 165 (240)
T ss_pred CCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHHHHHhcC
Confidence 4444444344445555666555677777677777666543 345678888843 4555666676654
Q ss_pred CCCceeccccccccCccc
Q 009077 326 PHAKLGQGYGMTEAGPVL 343 (544)
Q Consensus 326 ~~~~v~~~yG~tE~~~~~ 343 (544)
.+.-++..-|.++.+++.
T Consensus 166 ~d~afis~~gi~~~~G~~ 183 (240)
T PRK10411 166 IDLFIFSCEGIDSSGALW 183 (240)
T ss_pred CCEEEEeceeECCCCCcc
Confidence 477788888876544333
No 332
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=24.95 E-value=4.4e+02 Score=27.29 Aligned_cols=90 Identities=13% Similarity=0.115 Sum_probs=57.5
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 120 (544)
++.+-..+.+..-||+. ....+.++..-.+.+ .+| | |.+..+=....+.++|.+.|..++.+-|...+..-...+
T Consensus 33 ~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g--V-V~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~~ 107 (499)
T TIGR01124 33 RILIKREDLQPVFSFKL-RGAYNKMAQLSPEQK-ARG--V-IAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDAV 107 (499)
T ss_pred EEEEEecCCCCCCCCHH-HHHHHHHHHhhHHhc-CCE--E-EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 45554443344456666 222333333222322 222 3 334556666777889999999998888888777777889
Q ss_pred HhcCceEEEEecchh
Q 009077 121 IASKAKIIITQAVYN 135 (544)
Q Consensus 121 ~~~~~~~vi~~~~~~ 135 (544)
+..+++++++.....
T Consensus 108 r~~GA~Vvl~g~~~d 122 (499)
T TIGR01124 108 RGFGGEVVLHGANFD 122 (499)
T ss_pred HhCCCEEEEeCcCHH
Confidence 999999999976543
No 333
>TIGR01228 hutU urocanate hydratase. This model represents the second of four enzymes involved in the degradation of histidine to glutamate.
Probab=24.91 E-value=7.6e+02 Score=25.29 Aligned_cols=31 Identities=10% Similarity=-0.051 Sum_probs=20.2
Q ss_pred CeEEEEecchhhHHhhHHHHHHHHHhCcEEEEc
Q 009077 227 EDVILCVLPLFHIYSLNSVLLCALRVGAAILIM 259 (544)
Q Consensus 227 ~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 259 (544)
.-+++....+..+.|. ..+++-.+|+..+..
T Consensus 157 ~G~~~lTaGLGGMgGA--QPlA~~mag~v~i~v 187 (545)
T TIGR01228 157 KGKWVLTAGLGGMGGA--QPLAVTMNGGVSIAV 187 (545)
T ss_pred ceeEEEEeCCCccccc--cHHHHHHcCceEEEE
Confidence 4567777778777665 455666666666653
No 334
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=24.91 E-value=4e+02 Score=26.33 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=44.2
Q ss_pred EEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhH
Q 009077 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYND 136 (544)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 136 (544)
.+.+..+=....+.++|.+.|..+..+-|...+..-...++..+++++++.....+
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 106 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDYDE 106 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCHHH
Confidence 34445566667788899999999888888888878888899999999998765433
No 335
>PRK06721 threonine synthase; Reviewed
Probab=24.80 E-value=3.2e+02 Score=26.75 Aligned_cols=58 Identities=21% Similarity=0.135 Sum_probs=40.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCC-CHHHHHHHHHhcCceEEEEecchhH
Q 009077 78 DVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-TPPEIAKQAIASKAKIIITQAVYND 136 (544)
Q Consensus 78 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 136 (544)
++|.. ...+=.-..+.++|...|..++.+-|.. .+......++..+++++++......
T Consensus 76 ~~vV~-aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 76 EAIIC-ASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFDD 134 (352)
T ss_pred CEEEE-ECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 34433 3444455677778889999888777764 3555666788999999999865443
No 336
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=24.73 E-value=7.8e+02 Score=25.41 Aligned_cols=90 Identities=20% Similarity=0.192 Sum_probs=58.5
Q ss_pred CCCccEEEeCCCC-------ceeeHHHHHHHHHHHHHHHHHcCCC-CCCEEEEEcCCCcc-HHHHHHHHHhhCCeEeecC
Q 009077 38 FADRPCIINGPTG-------DVYTYADVELTSRKVAAGLSKLGVQ-KGDVIMLLLQNCPQ-FVFAFLGASYIGATSTTAN 108 (544)
Q Consensus 38 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~-~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~ 108 (544)
.++.+|++.-.++ -.+|++.+...+..+... .++. ++|++...+|-.-. .+..+++++..|+..+..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 4566676532222 568999888776655443 4666 88998888775432 2345677888899888765
Q ss_pred CC-C--CHHHHHHHHHhcCceEEEE
Q 009077 109 PF-Y--TPPEIAKQAIASKAKIIIT 130 (544)
Q Consensus 109 ~~-~--~~~~l~~~l~~~~~~~vi~ 130 (544)
+. . .+..+...+.+.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 31 2 3556777888888876543
No 337
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=24.59 E-value=2.9e+02 Score=26.58 Aligned_cols=89 Identities=11% Similarity=0.030 Sum_probs=55.3
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 120 (544)
++.+-....+-+-++++- .+..+...+.+.| ++.|... ..+-.-..+.++|...|..+..+-|...+......+
T Consensus 39 ~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l 112 (324)
T cd01563 39 NLYVKDEGLNPTGSFKDR--GMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQA 112 (324)
T ss_pred ceEEEecCCCCcccHHHh--hHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHH
Confidence 455544433444555532 2333333344444 4555554 334444555688999999888877766677778889
Q ss_pred HhcCceEEEEecchh
Q 009077 121 IASKAKIIITQAVYN 135 (544)
Q Consensus 121 ~~~~~~~vi~~~~~~ 135 (544)
+..++++++++....
T Consensus 113 ~~~GA~Vi~~~~~~~ 127 (324)
T cd01563 113 LAYGATVLAVEGNFD 127 (324)
T ss_pred HHcCCEEEEECCcHH
Confidence 999999999987543
No 338
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=24.47 E-value=3.6e+02 Score=25.50 Aligned_cols=58 Identities=12% Similarity=0.116 Sum_probs=43.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh
Q 009077 77 GDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (544)
Q Consensus 77 g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 135 (544)
++.|... ..+-.-..+.++|.+.|..++.+-|...+......++..+++++.++....
T Consensus 65 ~~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~ 122 (304)
T cd01562 65 AKGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFD 122 (304)
T ss_pred CCcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 3444444 456666777788889998888777776677778889999999999987533
No 339
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=23.88 E-value=7.2e+02 Score=24.62 Aligned_cols=10 Identities=20% Similarity=0.059 Sum_probs=4.7
Q ss_pred eHHHHHHHHH
Q 009077 54 TYADVELTSR 63 (544)
Q Consensus 54 Ty~el~~~~~ 63 (544)
|+.+|.+...
T Consensus 54 ~~~~lE~~lA 63 (385)
T PRK08574 54 TLRPLEEALA 63 (385)
T ss_pred cHHHHHHHHH
Confidence 4555554433
No 340
>PRK06145 acyl-CoA synthetase; Validated
Probab=23.86 E-value=7.8e+02 Score=25.03 Aligned_cols=84 Identities=12% Similarity=0.185 Sum_probs=58.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEE
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCP--QFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKII 128 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 128 (544)
..+|+..+...+. ......++..++++....|-.- .+....++++..|+..+..+ ..+...+...+++.++..+
T Consensus 167 v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~ 242 (497)
T PRK06145 167 VMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHR-EFDPEAVLAAIERHRLTCA 242 (497)
T ss_pred EEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECC-cCCHHHHHHHHHHhCCeEE
Confidence 5688988875443 3344568899999887776421 22233466677888766654 4678888899999999998
Q ss_pred EEecchhHHH
Q 009077 129 ITQAVYNDKV 138 (544)
Q Consensus 129 i~~~~~~~~~ 138 (544)
...+.....+
T Consensus 243 ~~~P~~~~~l 252 (497)
T PRK06145 243 WMAPVMLSRV 252 (497)
T ss_pred EehHHHHHHH
Confidence 8877665544
No 341
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=23.73 E-value=1.1e+02 Score=21.78 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=22.0
Q ss_pred CceeeHHHHHHHHHHHHHHHHHcCC
Q 009077 50 GDVYTYADVELTSRKVAAGLSKLGV 74 (544)
Q Consensus 50 ~~~~Ty~el~~~~~~la~~L~~~g~ 74 (544)
++++|.++|.+.++++.+.+.++|.
T Consensus 28 g~~l~~~~l~~~~~~l~~~y~~~GY 52 (76)
T PF08479_consen 28 GRCLTLADLQQLADALTNYYREKGY 52 (76)
T ss_dssp TSBB-HHHHHHHHHHHHHHHHHTT-
T ss_pred CCCcCHHHHHHHHHHHHHHHHHcCc
Confidence 6899999999999999999999886
No 342
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=23.61 E-value=2.3e+02 Score=20.67 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=30.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCe
Q 009077 64 KVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGAT 103 (544)
Q Consensus 64 ~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 103 (544)
.+...+...+..+++.|.+++..+.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 4455555677888999999998887777777777777765
No 343
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=23.51 E-value=1.3e+02 Score=26.17 Aligned_cols=59 Identities=19% Similarity=0.074 Sum_probs=41.1
Q ss_pred CCHHHHHHhhhccCCCccEEEeCCCC--ce--eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 009077 25 LPLHTYCFENISQFADRPCIINGPTG--DV--YTYADVELTSRKVAAGLSKLGVQKGDVIMLLL 84 (544)
Q Consensus 25 ~~~~~~l~~~a~~~p~~~a~~~~~~~--~~--~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~ 84 (544)
....+.+.+..+.+|...+.+.+..+ .+ +.-+==.+|++.++.+|.+.|+.++ ++.+..
T Consensus 99 ~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~G 161 (190)
T COG2885 99 QATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTVG 161 (190)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEEE
Confidence 45566667777889988888766544 22 3333335679999999999998777 666553
No 344
>PF08515 TGF_beta_GS: Transforming growth factor beta type I GS-motif; InterPro: IPR003605 Transforming growth factor beta (TGF-beta) is a member of a large family of secreted growth factors of central importance in eukaryotic development and homeostasis. Members of this family, which includes the activins, inhibins and bone morphogenic proteins (BMPs), bind to receptors that consist of two transmembrane serine/threonine (Ser/Thr) kinases called the type I and type II receptors. Type II activates Type I upon formation of the ligand receptor complex by multiply phosphorylating the GS domain, a short (~30 residues), highly conserved regulatory sequence just N-terminal to the kinase domain on the cytoplasmic side of the receptor. The GS domain is found only in the type I receptor family and is named for the TTSGSGSG sequence at its core. At least three, and perhaps four to five of the serines and threonines in the GS domain, must be phosphorylated to fully activate TbetaR-1 []. The GS domain forms a helix-loop-helix structure in which the sites of activating phosphorylation are situated in a loop known as the GS loop. One key role for phosphorylation is to block the adoption of an inactivating configuration by the GS domain [].; GO: 0004675 transmembrane receptor protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation, 0016020 membrane; PDB: 3MY0_H 3Q4U_B 3H9R_A 3MTF_B 3OOM_A 3KCF_C 3FAA_A 1IAS_A 1PY5_A 2X7O_C ....
Probab=23.49 E-value=39 Score=19.10 Aligned_cols=15 Identities=47% Similarity=0.574 Sum_probs=9.8
Q ss_pred cCCCC-CCCCchhhhc
Q 009077 189 YSSGT-TGLPKGVMLT 203 (544)
Q Consensus 189 ~TSGt-TG~pk~v~~t 203 (544)
.|||| +|.|-.|..|
T Consensus 11 ~tSGSGSGlplLvQRT 26 (29)
T PF08515_consen 11 STSGSGSGLPLLVQRT 26 (29)
T ss_dssp HCCTSSSSS-HHHHHH
T ss_pred ccCCCCCCchhhhhhh
Confidence 47787 5788777655
No 345
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.45 E-value=6e+02 Score=23.55 Aligned_cols=96 Identities=13% Similarity=0.180 Sum_probs=52.8
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCC--CCHH---HHHHHHHhcCceEE
Q 009077 54 TYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPF--YTPP---EIAKQAIASKAKII 128 (544)
Q Consensus 54 Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~l~~~l~~~~~~~v 128 (544)
.++.+.++...+-..+.+.--....+..+...+...+++-.|++-..+.. .+. .++. .+...++..+.++|
T Consensus 146 N~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Y~~~~ygl~~~~~~----~~~~eps~~~l~~l~~~ik~~~v~~i 221 (266)
T cd01018 146 NLDALLAELDALDSEIRTILSKLKQRAFMVYHPAWGYFARDYGLTQIPIE----EEGKEPSPADLKRLIDLAKEKGVRVV 221 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeEEEECchhHHHHHHcCCEEEecC----CCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 34444444445544444421111234455556677777666655544321 122 2343 45566777899999
Q ss_pred EEecchhHHHH-HHHhhcCcEEEEeC
Q 009077 129 ITQAVYNDKVR-DLSEHHGARIVTID 153 (544)
Q Consensus 129 i~~~~~~~~~~-~~~~~~~~~~v~~~ 153 (544)
|+.+...+... .++.+.+.+++.++
T Consensus 222 f~e~~~~~~~~~~la~~~g~~v~~ld 247 (266)
T cd01018 222 FVQPQFSTKSAEAIAREIGAKVVTID 247 (266)
T ss_pred EEcCCCCcHHHHHHHHHcCCeEEEeC
Confidence 99877665444 44455577777665
No 346
>PRK08638 threonine dehydratase; Validated
Probab=23.11 E-value=5.2e+02 Score=25.05 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=43.2
Q ss_pred EEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHH
Q 009077 82 LLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (544)
Q Consensus 82 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 137 (544)
+....+-.-..+.++|...|..+..+-|...+......++..+++++++.....+.
T Consensus 79 v~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 134 (333)
T PRK08638 79 VACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDT 134 (333)
T ss_pred EEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHH
Confidence 33444555677788999999998888887777778889999999999997654433
No 347
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=23.05 E-value=2.6e+02 Score=28.22 Aligned_cols=79 Identities=18% Similarity=0.100 Sum_probs=58.0
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|+..+...+......+. ..++.+++++....+-...+ ...+++++..|+..+..+. ...+.+...+++.++..+
T Consensus 28 ~~ty~el~~~~~~~a~~L~-~~g~~~~~~v~l~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 104 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFA-QQGVVEGSGVALRGKNSPET--LLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFA 104 (458)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEE
Confidence 5778888777766655444 24688999998887765533 3567889999999988754 577778888888888777
Q ss_pred cCc
Q 009077 280 PFV 282 (544)
Q Consensus 280 ~~~ 282 (544)
...
T Consensus 105 i~~ 107 (458)
T PRK09029 105 LVL 107 (458)
T ss_pred EEc
Confidence 643
No 348
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=22.75 E-value=7.1e+02 Score=24.18 Aligned_cols=75 Identities=19% Similarity=0.136 Sum_probs=51.2
Q ss_pred CCCEEE-EEcCCCccHHHHH-HHHHhhCCeEeecCCCCC-------HHHHHHHHHhcCceEEEEecchhHHHHHHHhhcC
Q 009077 76 KGDVIM-LLLQNCPQFVFAF-LGASYIGATSTTANPFYT-------PPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG 146 (544)
Q Consensus 76 ~g~~V~-i~~~~~~~~~~~~-lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 146 (544)
.|..|+ ++..+|...-+.+ .|+.++|+.++.++++.+ ..+....+... +.+|+.-......+.+.+....
T Consensus 44 ~gk~l~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y-~D~Iv~R~~~~~~~~~~a~~~~ 122 (336)
T PRK03515 44 TGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM-YDGIQYRGYGQEIVETLAEYAG 122 (336)
T ss_pred CCCEEEEEecCCChhHHHHHHHHHHHcCCcEEEeCCccccCCCCCCHHHHHHHHHHh-CcEEEEEeCChHHHHHHHHhCC
Confidence 355555 6677888887777 899999999999987532 34555666666 7777777666666666655545
Q ss_pred cEEEE
Q 009077 147 ARIVT 151 (544)
Q Consensus 147 ~~~v~ 151 (544)
+.+|-
T Consensus 123 vPVIN 127 (336)
T PRK03515 123 VPVWN 127 (336)
T ss_pred CCEEE
Confidence 54443
No 349
>PRK07868 acyl-CoA synthetase; Validated
Probab=22.70 E-value=2.8e+02 Score=31.72 Aligned_cols=84 Identities=17% Similarity=0.082 Sum_probs=62.1
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceecc
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAP 280 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~ 280 (544)
.+|...+...+..+...+. ..++.+++++...++-... ++..+++++..|+..+..+.. ..+...++..+++.++
T Consensus 472 ~lTY~eL~~ra~rlA~~L~-~~Gv~~Gd~VaI~~~n~~e--~v~a~lA~~~aGav~vpl~p~--~~l~~il~~s~~~~li 546 (994)
T PRK07868 472 VHTYEAVNRRINNVVRGLI-AVGVRQGDRVGVLMETRPS--ALVAIAALSRLGAVAVLMPPD--TDLAAAVRLGGVTEII 546 (994)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCCEEEEeCCc--hhHHHHHhccCCeEEE
Confidence 4788888777776666554 4578999999888876543 335688999999999887753 4677778888888887
Q ss_pred CcHHHHHHH
Q 009077 281 FVPPIVLAV 289 (544)
Q Consensus 281 ~~P~~l~~l 289 (544)
..+..+..+
T Consensus 547 ~~~~~~~~~ 555 (994)
T PRK07868 547 TDPTNLEAA 555 (994)
T ss_pred EChHHHHHH
Confidence 776665544
No 350
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=22.36 E-value=3.8e+02 Score=26.85 Aligned_cols=58 Identities=7% Similarity=-0.089 Sum_probs=46.5
Q ss_pred EEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHH
Q 009077 80 IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (544)
Q Consensus 80 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 137 (544)
-.|....+=.-+.+.++|...|..++.+-|...+..-...++..+++++++.......
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a 193 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKA 193 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHH
Confidence 3455565666678888999999998888888888888899999999999998665443
No 351
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=22.01 E-value=2.9e+02 Score=21.28 Aligned_cols=50 Identities=18% Similarity=-0.007 Sum_probs=34.7
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeec
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA 107 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 107 (544)
..+.+.++.+ .+...+..+++.|.++|.++.....+...+.+.|..-+-.
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 4566666543 3455555667889999999888777777788888765533
No 352
>PRK08526 threonine dehydratase; Provisional
Probab=21.94 E-value=4.7e+02 Score=26.15 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=43.8
Q ss_pred EEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHH
Q 009077 82 LLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDK 137 (544)
Q Consensus 82 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 137 (544)
|.+..+=....+.++|.+.|..+..+-|...+..-...++..++.++++.....+.
T Consensus 72 V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a 127 (403)
T PRK08526 72 IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEA 127 (403)
T ss_pred EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 34555666778889999999998888887777666777899999999998654443
No 353
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=21.86 E-value=3.7e+02 Score=27.17 Aligned_cols=59 Identities=7% Similarity=-0.101 Sum_probs=47.3
Q ss_pred EEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHH
Q 009077 80 IMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKV 138 (544)
Q Consensus 80 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 138 (544)
-.+..+.+=.-+.+.++|...|..++.+-|...+..-...++..++.++++...+...+
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~ 212 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAV 212 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 44555556666778889999999988888888888889999999999999987755443
No 354
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=21.69 E-value=3.4e+02 Score=26.94 Aligned_cols=87 Identities=9% Similarity=0.163 Sum_probs=56.5
Q ss_pred CCEEEEEcCCCccHH-HHHHHHHhhCCeEeecCCCCCH--HHHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeC
Q 009077 77 GDVIMLLLQNCPQFV-FAFLGASYIGATSTTANPFYTP--PEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTID 153 (544)
Q Consensus 77 g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~ 153 (544)
|+.+.+ .+.+...+ .+++++++.|-.++..+.-+.. ..+...+...+..+.+++....+.+...... +.++|.++
T Consensus 70 g~~a~~-~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~E 147 (386)
T PF01053_consen 70 GEDALL-FSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRP-NTKLVFLE 147 (386)
T ss_dssp -SEEEE-ESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEE
T ss_pred ccceee-ccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccc-cceEEEEE
Confidence 444444 45666665 7888899999888877776643 4466678889999999988777777665544 66777776
Q ss_pred CCCC---CCccHHHH
Q 009077 154 PPPE---NCLHFSEL 165 (544)
Q Consensus 154 ~~~~---~~~~~~~~ 165 (544)
.+.. +..++..+
T Consensus 148 spsNP~l~v~Dl~~i 162 (386)
T PF01053_consen 148 SPSNPTLEVPDLEAI 162 (386)
T ss_dssp SSBTTTTB---HHHH
T ss_pred cCCCcccccccHHHH
Confidence 6443 34444444
No 355
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=21.56 E-value=1.8e+02 Score=27.43 Aligned_cols=55 Identities=11% Similarity=0.174 Sum_probs=45.1
Q ss_pred ceeeHHHHHHH-----HH-HHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEe
Q 009077 51 DVYTYADVELT-----SR-KVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATST 105 (544)
Q Consensus 51 ~~~Ty~el~~~-----~~-~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 105 (544)
..+.|.++.+. +. .+...+..+|+.+++.|.++|..+...-+.+||+-.+|...+
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 67899999882 22 344444478999999999999999999999999999998754
No 356
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=21.54 E-value=3.1e+02 Score=20.02 Aligned_cols=50 Identities=8% Similarity=-0.103 Sum_probs=32.6
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCC
Q 009077 51 DVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP 109 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~ 109 (544)
..+++.++.+.. . .+.++.+|.++|.++.....+...+.+.|..+..++.
T Consensus 34 ~~ip~~~~~~~~-------~--~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~~v~~l~G 83 (90)
T cd01524 34 INIPLDELRDRL-------N--ELPKDKEIIVYCAVGLRGYIAARILTQNGFKVKNLDG 83 (90)
T ss_pred EeCCHHHHHHHH-------H--hcCCCCcEEEEcCCChhHHHHHHHHHHCCCCEEEecC
Confidence 457776665432 2 2466788999998877776666677778874444443
No 357
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=21.46 E-value=6.4e+02 Score=24.16 Aligned_cols=53 Identities=11% Similarity=-0.034 Sum_probs=42.1
Q ss_pred EcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchh
Q 009077 83 LLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYN 135 (544)
Q Consensus 83 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 135 (544)
....+-.-..+.++|.+.|..++.+-|...+......++..++.+++++....
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQD 124 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 44455566777889999999988877777777788889999999999987543
No 358
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=21.15 E-value=2.7e+02 Score=28.95 Aligned_cols=79 Identities=11% Similarity=-0.043 Sum_probs=57.8
Q ss_pred hhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccC-cCHHHHHHHHHhccceec
Q 009077 201 MLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQK-FDIVKLMELVQKYKVTVA 279 (544)
Q Consensus 201 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~-~~~~~~~~~i~~~~~t~l 279 (544)
.+|...+...+......+. ..++.+++++...++-... ....+++++..|+.++..+. .....+...++..++..+
T Consensus 46 ~~ty~el~~~~~~~a~~L~-~~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAALL-RAGYGKDASVALYLGNTPD--HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChH--HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEE
Confidence 4777777666665555443 3578899999988885443 23567888889999887654 577889999999988887
Q ss_pred cCc
Q 009077 280 PFV 282 (544)
Q Consensus 280 ~~~ 282 (544)
+..
T Consensus 123 i~~ 125 (541)
T TIGR03205 123 ITS 125 (541)
T ss_pred EEe
Confidence 654
No 359
>PRK07409 threonine synthase; Validated
Probab=21.02 E-value=3.8e+02 Score=26.15 Aligned_cols=90 Identities=13% Similarity=0.033 Sum_probs=52.1
Q ss_pred ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCC-CHHHHHHH
Q 009077 41 RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFY-TPPEIAKQ 119 (544)
Q Consensus 41 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~ 119 (544)
++.+-....+..-++++-- +..+...+.+.|. +.| +....+=.-..+.++|...|..+..+-|.. .+..-...
T Consensus 47 ~i~~K~E~~nptGSfKdR~--a~~~l~~a~~~g~---~~i-v~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~ 120 (353)
T PRK07409 47 EVYVKYEGLNPTGSFKDRG--MTMAVTKAKEEGA---KAV-ICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQ 120 (353)
T ss_pred eEEEEecCCCCccchHHHH--HHHHHHHHHHCCC---CEE-EEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHH
Confidence 4555444334444555432 2223333334442 233 334444446777888899998876666654 45555667
Q ss_pred HHhcCceEEEEecchhH
Q 009077 120 AIASKAKIIITQAVYND 136 (544)
Q Consensus 120 l~~~~~~~vi~~~~~~~ 136 (544)
++..++++++++....+
T Consensus 121 ~~~~GA~Vi~~~~~~~~ 137 (353)
T PRK07409 121 AVMYGAEIIQIDGNFDD 137 (353)
T ss_pred HHhcCCEEEEECCCHHH
Confidence 78899999999875433
No 360
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=20.91 E-value=2.4e+02 Score=26.44 Aligned_cols=49 Identities=12% Similarity=0.108 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHhhCCe-EeecCC
Q 009077 61 TSRKVAAGLSKLGVQKGDVIMLLLQNCPQ-FVFAFLGASYIGAT-STTANP 109 (544)
Q Consensus 61 ~~~~la~~L~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~-~v~l~~ 109 (544)
....+...|.+.|+.+++.|.+++..+.. ...+++.+...|.. +..++.
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~G 121 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAG 121 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCC
Confidence 35678888999999999999999987653 33455666777855 334443
No 361
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=20.83 E-value=2.4e+02 Score=24.65 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=20.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHc
Q 009077 51 DVYTYADVELTSRKVAAGLSKL 72 (544)
Q Consensus 51 ~~~Ty~el~~~~~~la~~L~~~ 72 (544)
.-+||.|+.+++.++|..+.+.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999999985
No 362
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=20.79 E-value=7.6e+02 Score=23.93 Aligned_cols=61 Identities=16% Similarity=0.010 Sum_probs=53.4
Q ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecc
Q 009077 73 GVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (544)
Q Consensus 73 g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 133 (544)
-+.||..+.+=...+=--+...|.|...|..++.+-|.....+-...|+..++.+|.++..
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 3689988888877777778888999999999999999888888899999999999999865
No 363
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=20.41 E-value=5.6e+02 Score=24.11 Aligned_cols=57 Identities=21% Similarity=0.139 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecc
Q 009077 76 KGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAV 133 (544)
Q Consensus 76 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 133 (544)
.++.| +....+-.-..+.++|...|..++.+-|...+......++..++.++.+...
T Consensus 55 ~~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 55 GGRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TTSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred cccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 44666 6666676777778888889999888888777778888999999999988664
No 364
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=20.37 E-value=7.8e+02 Score=23.72 Aligned_cols=13 Identities=15% Similarity=0.164 Sum_probs=6.6
Q ss_pred eCcHHHHHHHHcC
Q 009077 448 VAPAELEAMLIAH 460 (544)
Q Consensus 448 v~~~~ie~~l~~~ 460 (544)
...++||+.+..+
T Consensus 339 ~~~e~v~~~~~~l 351 (356)
T cd06451 339 ATREDVLGVLSAL 351 (356)
T ss_pred CCHHHHHHHHHHH
Confidence 3445566555443
No 365
>PRK07671 cystathionine beta-lyase; Provisional
Probab=20.15 E-value=7.5e+02 Score=24.37 Aligned_cols=72 Identities=7% Similarity=0.019 Sum_probs=41.2
Q ss_pred EEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHH--HHHHHHHhcCceEEEEecchhHHHHHHHhhcCcEEEEeC
Q 009077 81 MLLLQNCPQFVFAFLGASYIGATSTTANPFYTPP--EIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTID 153 (544)
Q Consensus 81 ~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~--~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~v~~~ 153 (544)
+++.+++...+.+.+++++.|-.++..++.+... .+...+...++++.+++....+.+.+.... +.+++.+.
T Consensus 68 ~~~~~sG~aai~~~~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~-~tklV~le 141 (377)
T PRK07671 68 GFAFGSGMAAITAVMMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRP-NTKAIYVE 141 (377)
T ss_pred eEEeCCHHHHHHHHHHHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCC-CCeEEEEE
Confidence 3556667666666667777777777667766532 234455667777777765444444333321 33555543
No 366
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=20.13 E-value=8.4e+02 Score=24.03 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCC--C----CCHHHHHHHHHhc------CceEEEEe
Q 009077 74 VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANP--F----YTPPEIAKQAIAS------KAKIIITQ 131 (544)
Q Consensus 74 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~--~----~~~~~l~~~l~~~------~~~~vi~~ 131 (544)
.++||.|.+-. ..+...+.++...|+.++.++. . .+.+.+...++.. ++++|+.+
T Consensus 99 ~~~gd~Vlv~~---~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLDG---LAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEECC---CchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 36788776642 3344444566677877776654 1 3567777766542 56666654
No 367
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=20.11 E-value=5e+02 Score=27.69 Aligned_cols=97 Identities=20% Similarity=0.178 Sum_probs=66.4
Q ss_pred CCCCEEEEecCCCCCCCCchhhhchHHHHHHHHHhhhcCCCCccCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEE-
Q 009077 180 NPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILI- 258 (544)
Q Consensus 180 ~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~- 258 (544)
..+.++.+...-++.+.+. ++...+......++.... ..++.++|++...+|+.--.- ...+++...|+....
T Consensus 78 ~~~~~a~~~~~~~~~~~~~---~t~~el~~~v~~~a~~l~-~~g~~kGD~V~~~mPm~~e~~--ia~lA~~r~Gai~~~v 151 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEV---WTYKELLDQVVRLANVLR-KCGLKKGDTVAIYMPMIPEAV--IAMLACARIGAIHSSV 151 (626)
T ss_pred CCCCcEEEEEecCCCceEE---EEHHHHHHHHHHHHHHHH-hcCCCCCcEEEEeccCChHHH--HHHHHHhhcCeEEEEe
Confidence 3566677666555555443 677777666666655555 678999999999999865432 345556666665544
Q ss_pred ccCcCHHHHHHHHHhccceeccCc
Q 009077 259 MQKFDIVKLMELVQKYKVTVAPFV 282 (544)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t~l~~~ 282 (544)
...+.+..++..++.-++..++..
T Consensus 152 ~~~fs~~~l~~Rl~~~~~k~i~t~ 175 (626)
T KOG1175|consen 152 FAGFSAKELLDRLQDSKAKVIITQ 175 (626)
T ss_pred eccCCHHHHHHHHHhcCCCEEEEE
Confidence 456899999999988887776543
No 368
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=20.06 E-value=6e+02 Score=23.26 Aligned_cols=60 Identities=5% Similarity=-0.097 Sum_probs=44.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhhCCeEeecCCCCCHHHHHHHHHhcCceEEEEecchhHHHHHHHh
Q 009077 75 QKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSE 143 (544)
Q Consensus 75 ~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 143 (544)
+.|..|+|.|..+..---++.|++.+- ..+++++....++..++.++ ...+...+.+...
T Consensus 168 ~~g~~VaVHC~AGlGRTGtl~AayLI~-------~GmspeeAI~~VR~~RPgAI--n~~Q~~fL~~y~~ 227 (241)
T PTZ00393 168 KNNRAVAVHCVAGLGRAPVLASIVLIE-------FGMDPIDAIVFIRDRRKGAI--NKRQLQFLKAYKK 227 (241)
T ss_pred hcCCeEEEECCCCCCHHHHHHHHHHHH-------cCCCHHHHHHHHHHHCCCCC--CHHHHHHHHHHHH
Confidence 578899999999988777777776642 34678888888999998875 3556666665543
No 369
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=20.04 E-value=7.7e+02 Score=24.39 Aligned_cols=84 Identities=13% Similarity=0.101 Sum_probs=50.0
Q ss_pred cCCCCeEEEEecchhhHHhhHHHHHHHHHhCcEEEEccCcCHHHHHHHHHhccceeccCcHHHHHHHHhcCCCCCCCCCC
Q 009077 223 YLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSS 302 (544)
Q Consensus 223 ~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~l~~ 302 (544)
++.++|.++.. |++ +.....+.++.|+..|+.+- .+..+...|..++.-.... -..
T Consensus 70 ~ig~GDeVI~p-s~T----fvATan~i~~~Ga~PVFvDi-------------d~~T~nid~~~ie~aIt~~------tKA 125 (374)
T COG0399 70 AIGPGDEVIVP-SFT----FVATANAVLLVGAKPVFVDI-------------DPDTLNIDPDLIEAAITPR------TKA 125 (374)
T ss_pred CCCCCCEEEec-CCc----hHHHHHHHHHcCCeEEEEec-------------CCcccCCCHHHHHHHcccC------CeE
Confidence 47888866643 222 33556778899999999762 1122223333333222111 123
Q ss_pred ceEEEEecccCCHHHHHHHHHHCCCCcee
Q 009077 303 IRTVMSGAAPMGKELEDAVRAKLPHAKLG 331 (544)
Q Consensus 303 l~~~~~~G~~l~~~~~~~~~~~~~~~~v~ 331 (544)
+--+.+.|-+.+.+.+..+.+.. +..|+
T Consensus 126 IipVhl~G~~~dm~~i~~la~~~-~l~vI 153 (374)
T COG0399 126 IIPVHLAGQPCDMDAIMALAKRH-GLPVI 153 (374)
T ss_pred EEEehhccCCCCHHHHHHHHHHc-CCeEE
Confidence 33455678889999999999887 66654
No 370
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=20.03 E-value=2.1e+02 Score=20.43 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=32.3
Q ss_pred CCCCCCCHHHHHHhhhccCCC-------ccEEEeCCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 009077 20 YIPNHLPLHTYCFENISQFAD-------RPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN 86 (544)
Q Consensus 20 ~~~~~~~~~~~l~~~a~~~p~-------~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~~ 86 (544)
..++..|+.+++.+-..++|+ ..++.-. ++.++ .+.-++.||+|+++.|-
T Consensus 21 ~~~~~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vN--g~~v~---------------~~~~l~~gD~v~i~ppv 77 (80)
T cd00754 21 ELPEGATVGELLDALEARYPGLLEELLARVRIAVN--GEYVR---------------LDTPLKDGDEVAIIPPV 77 (80)
T ss_pred ECCCCCcHHHHHHHHHHHCchHHHhhhhcEEEEEC--CeEcC---------------CCcccCCCCEEEEeCCC
Confidence 345568999999998888775 2222222 33333 22357899999998764
Done!