BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009080
(544 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 95/151 (62%), Gaps = 19/151 (12%)
Query: 135 AAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQ 194
+A IQ AFRGY+AR++ RALKGLV+LQ +VRG++V++Q ++ MQ +VRVQ+++ +
Sbjct: 324 SATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSR 383
Query: 195 RVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEEVKVM 254
R+K+ ++ ++ + + W + S G+ D+WD+ T EE
Sbjct: 384 RIKMLENQAQ----VEKDEAKW------------AASEAGN---DNWDDSVLTKEERDSR 424
Query: 255 LQQRKEAALKRERTLSHAFSQQMWRNGRSSS 285
Q++ +A +KRER++++A+S+++W+N S+
Sbjct: 425 SQRKTDAIIKRERSMAYAYSRKLWKNSPKST 455
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 433 SSSGTLPNYMAATESAKAKARSQSAPRQRP-STPERDRVGSAKKRLSFP 480
+S P+YMA T SAKAK R S P++R TP S K+R+S+P
Sbjct: 560 TSCPPFPSYMAPTVSAKAKVRPNSNPKERVMGTPV-----SEKRRMSYP 603
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 28/217 (12%)
Query: 112 SAHAAAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVR 171
S H A V R ++E AAI+IQ+ FRG+LARR + ++G +L+ L+ G V+
Sbjct: 91 SVHQAIVVNRF----AGKSKEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQ 146
Query: 172 KQAKMTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMS 231
+QA +TL+CMQ L RVQ+++ +R+++S++ ++R+ Q + + +
Sbjct: 147 RQAAITLKCMQTLSRVQSQIRSRRIRMSEEN--------------QARHKQ-LLQKHAKE 191
Query: 232 REGSSIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADE 291
G +W+ + E+V+ + + EA ++RER L++AF+ Q +N +S S
Sbjct: 192 LGGLKNGGNWNYSNQSKEQVEAGMLHKYEATMRRERALAYAFTHQ--QNLKSFSKTANPM 249
Query: 292 LED--RP----KLLDRWMATKPWESKGRA-STDNRDH 321
D P L+RWMA +PWES + +T N D+
Sbjct: 250 FMDPSNPTWGWSWLERWMAGRPWESSEKEQNTTNNDN 286
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 23/140 (16%)
Query: 91 EHKHAIAMEMATAAAAEAAAASAHAAAEV--ARLIRPPTFNAREIYAA------------ 136
E I E+ +AA+AA +EV A + P + ++
Sbjct: 154 EEDDLIGTELQGPSAADAAKIEEDVTSEVEMASKVEPEESESDDVIIVRKESDEKVDEKL 213
Query: 137 -----IVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARV 191
+VIQ A RG+LARR L K ++KLQA VRGH VR QA +LRC+QA+V++QA V
Sbjct: 214 DESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMV 273
Query: 192 LDQRVKLS-QDGSRKSTFSD 210
R + S +DGSR S SD
Sbjct: 274 ---RARHSTKDGSRVSATSD 290
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 415 RSNYYYTGNVHQQSRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPERDRVGSAK 474
R+++ Y Q++R + +LP +M T+SAKAK + ++PR P ERD V SAK
Sbjct: 704 RTSFGY----DQEARESSGGKNSLPRFMQPTQSAKAKVQEHNSPRSSPDLQERDVV-SAK 758
Query: 475 KRLSFPVPEPYGVAMG 490
KR S P GV G
Sbjct: 759 KRHSLP-----GVTNG 769
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 131 REIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQAR 190
REI AA +Q AFRGYLARRA ALKG+++LQAL+RGH VR+QA TL + +VR+QA
Sbjct: 112 REI-AATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAF 170
Query: 191 VLDQRVKLSQDG 202
+ ++ S G
Sbjct: 171 ARGREIRKSDIG 182
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 426 QQSRGGASSSGTLPNYMAATESAKAKARSQSAPR 459
++S G +S ++P+YM AT+SAKAK R Q +P+
Sbjct: 486 EESNGHHETSPSIPSYMQATKSAKAKLRLQGSPK 519
>sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis
thaliana GN=CMTA2 PE=1 SV=1
Length = 1050
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 84 QADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVARLIRPPTFNAREIYAAIVIQTAF 143
Q ++K I+ E+A + AA S H++ V AA+ IQ +
Sbjct: 835 QLSELGGDNKFDISDELAVSFAAAKTKKSGHSSGAVHA-------------AAVQIQKKY 881
Query: 144 RGYLARRALRALKG-LVKLQALVRGHNVRKQAKMTLRCMQALVRVQAR 190
RG+ R+ ++ +VK+QA VRGH VRKQ + + + L ++ R
Sbjct: 882 RGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRAIIWSVGLLEKIILR 929
>sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis
thaliana GN=CMTA4 PE=1 SV=1
Length = 1016
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 135 AAIVIQTAFRGYLARRALRALK-GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQAR 190
AA+ IQ FRGY R+ L+ +VK+QA VRG+ +RK K+ ++ L +V R
Sbjct: 858 AALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAVRILDKVVLR 914
>sp|Q9H0B3|K1683_HUMAN Uncharacterized protein KIAA1683 OS=Homo sapiens GN=KIAA1683 PE=2
SV=1
Length = 1180
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 133 IYAAIVIQTAFRGYLARRALRAL-KGLVKLQALVRGHNVRK 172
I A I IQ RGYLARR +R +G + +QA RG+ VR+
Sbjct: 927 ILAVITIQAGVRGYLARRRIRLWHRGAMVIQATWRGYRVRR 967
>sp|P62297|ASPM_SHEEP Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Ovis aries GN=ASPM PE=2 SV=1
Length = 3374
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 126 PTFNAREIYA-----AIVIQTAFRGYLARRALRALK-GLVKLQALVRGHNVRKQAKMTLR 179
P + RE+Y+ I+IQ +G++ +R R LK +K+QA+ R H RK LR
Sbjct: 2816 PAKHQRELYSQIRSSVIIIQARVKGFIQKRKFRKLKDSTIKIQAVWRRHKARK----YLR 2871
Query: 180 CMQALVRVQA 189
++A R+QA
Sbjct: 2872 EVKAACRIQA 2881
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 135 AAIVIQTAFRGYLARRA-LRALKGLVKLQALVRGHNVRKQ 173
A + IQ+ +R Y +RR LR K VKLQ++VR RKQ
Sbjct: 1593 AVVKIQSYYRAYASRRKFLRLKKATVKLQSIVRMKQARKQ 1632
>sp|P62285|ASPM_BOVIN Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Bos taurus GN=ASPM PE=2 SV=1
Length = 3371
Score = 36.6 bits (83), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 126 PTFNAREIY-----AAIVIQTAFRGYLARRALRALK-GLVKLQALVRGHNVRKQAKMTLR 179
P + RE+Y + I+IQ +G++ +R R LK +K+QA+ R H RK LR
Sbjct: 2813 PAKHQRELYLQIRSSVIIIQARVKGFIQKRKFRELKDSTIKIQAVWRRHKARK----YLR 2868
Query: 180 CMQALVRVQA 189
++A R+QA
Sbjct: 2869 EVKAACRIQA 2878
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 135 AAIVIQTAFRGYLARRALRA-----LKGLVKLQALVRGHNVRK 172
AAI+IQ +R Y RA RA LK + LQA +RG VR+
Sbjct: 2058 AAIIIQVRYRAYCQGRAQRAKYLMILKAVALLQAALRGARVRQ 2100
>sp|Q99MZ6|MYO7B_MOUSE Unconventional myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=3
Length = 2113
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 66 QTSTKERSSAHHVTGSTSQADRAAEEHKHAIAME--MATAAAAEAAAASAHAAAEVARLI 123
Q K R H+ D+ + K I ++ T + A AA + R++
Sbjct: 715 QFQNKPRQMTLHIADLCLGTDKDWKVGKTKIFLKDHQDTVLEIRRSQALDGAAIRIQRVL 774
Query: 124 RPPTFN---AREIYAAIVIQTAFRGYLARRALR-ALKGLVKLQALVRGHNVRKQAK-MTL 178
R + R+ AA+ +Q +RGY R+ + L G +LQA+ R H + +Q + M
Sbjct: 775 RGHKYRKEFLRQRRAAVTLQAGWRGYSQRKNFKLILVGFERLQAIARSHLLMRQFQAMRQ 834
Query: 179 RCMQALVRVQARVLDQRVK 197
R +Q R + ++ Q+V+
Sbjct: 835 RIVQLQARCRGYLVRQQVQ 853
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.123 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,701,012
Number of Sequences: 539616
Number of extensions: 8061406
Number of successful extensions: 47629
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 597
Number of HSP's that attempted gapping in prelim test: 43282
Number of HSP's gapped (non-prelim): 4027
length of query: 544
length of database: 191,569,459
effective HSP length: 122
effective length of query: 422
effective length of database: 125,736,307
effective search space: 53060721554
effective search space used: 53060721554
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)