BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009082
(544 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q552J0|TCPQ_DICDI T-complex protein 1 subunit theta OS=Dictyostelium discoideum
GN=cct8 PE=3 SV=1
Length = 537
Score = 576 bits (1485), Expect = e-163, Method: Compositional matrix adjust.
Identities = 274/526 (52%), Positives = 384/526 (73%), Gaps = 4/526 (0%)
Query: 9 GIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68
G+ MLK+G KH +G DEA+L+NIDA KQLS ITRTSLGPNGMNKM+INHL+KLFVTNDA
Sbjct: 3 GLTDMLKDGAKHFAGKDEAILRNIDATKQLSEITRTSLGPNGMNKMIINHLEKLFVTNDA 62
Query: 69 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEII 128
ATI+ EL+V HPAAK+LV+A + Q++E+GDG N ++ GE LQ A L+ MGLHPSEII
Sbjct: 63 ATIIRELDVIHPAAKMLVMAAQMQEQEMGDGTNYVVTLTGEFLQKAATLLEMGLHPSEII 122
Query: 129 SGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADAC 188
+G+ KA K E++E ++ + D+ + +EV +K+A+ASKQ+G EE L +I +AC
Sbjct: 123 TGFEKAGAKLQEIIESMIVYNLK--DITDKKEVTKCLKSAIASKQYGYEEFLSEIITNAC 180
Query: 189 IQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGV 248
+QV PK NFN+DNVRV K+ GGG+ ++++++G V+ DA G+IK MEKAK+AVF G+
Sbjct: 181 LQVLPKKAVNFNIDNVRVTKIPGGGVTDTSVIKGFVIPMDAEGTIKRMEKAKIAVFTMGI 240
Query: 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCE 308
D TET G VLI N ++L ++K EE + I A+A +G +VI+SG+ V E+ALH+ E
Sbjct: 241 DLGRTETTGKVLITNEDELLQFSKGEEDSIRETITAIANTGVKVIISGSTVSELALHYIE 300
Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIVRNE 366
R+K+M+++I SKF+LRR C+ GA + L P P++LGY D V VEEIG + I R
Sbjct: 301 RFKIMLVRIQSKFQLRRVCKAIGATPLVKLGAPIPEELGYCDEVLVEEIGSTKCCIFRQN 360
Query: 367 GGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
+ +ST+V+RGST++ILDD+ERA+DDGVN +K MC+D R + GA A EIE +R+L+ F
Sbjct: 361 KEESEISTIVVRGSTNNILDDIERAIDDGVNVFKGMCKDGRFLAGAGAFEIEASRKLQAF 420
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
+ GL QY+I ++AE+FE++P+TLAE +G ++ + IS++YA H G T G+D+E+G
Sbjct: 421 ADATPGLSQYSIRQYAEAFEIIPRTLAETSGHDSSKAISNIYAAHTKGNTNYGLDIESGQ 480
Query: 487 CADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPR 532
+ M+V D + +K FA+K A + A TVLRVDQIIM+KPAGGP+
Sbjct: 481 PKSVLEMDVLDAFASKLFAIKLATNTANTVLRVDQIIMSKPAGGPK 526
>sp|Q6EE31|TCPQ_CHICK T-complex protein 1 subunit theta OS=Gallus gallus GN=CCT8 PE=1
SV=3
Length = 548
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/540 (50%), Positives = 385/540 (71%), Gaps = 10/540 (1%)
Query: 9 GIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68
G MLKEG KH SGL+EAV +NI ACK+L+ TRT+ GPNGMNKMVINHL+KLFVTNDA
Sbjct: 10 GFAQMLKEGAKHYSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDA 69
Query: 69 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEII 128
ATI+ ELEVQHPAAK+LV+A Q++E+GDG N + FAG +L+ AE+L+RMGL SE+I
Sbjct: 70 ATILRELEVQHPAAKMLVMASHMQEQEVGDGTNFVLVFAGVLLELAEDLLRMGLSVSEVI 129
Query: 129 SGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADAC 188
GY KA K +E+L +LV ++N+ R+ +EV + +V SKQ+G E L LIA AC
Sbjct: 130 EGYEKACKKALEILPDLVCCSAKNL--RDVDEVASLLHTSVMSKQYGNESFLSKLIAQAC 187
Query: 189 IQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGV 248
+ + P + +FNVDN+RV K++G G+ S+++ GMV + G + +++ AK AV++
Sbjct: 188 VSILP-DSGHFNVDNIRVCKIVGAGVSASSVLHGMVFNKETEGDVTSVKDAKXAVYSCPF 246
Query: 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCE 308
D TETKGTVLI NAE+L N++K EE ++ +KA+A+SGA V+V+G V +MALH+
Sbjct: 247 DGMITETKGTVLIKNAEELMNFSKGEENLMDLQVKAIADSGANVVVTGGKVADMALHYAN 306
Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIVRNE 366
+Y LM+++++SK++LRR C+T GA A+ L P +++G+ +SV + E+G +V + ++E
Sbjct: 307 KYNLMIVRLNSKWDLRRLCKTVGATALPRLTPPTLEEMGHCNSVYLSEVGDTQVVVFKHE 366
Query: 367 GGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
++ST+++RGSTD+++DD+ERAVDDGVNT+K + RD R+VPG ATEIELA+++ +
Sbjct: 367 KEDGAISTILIRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 426
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
GLDQYAI KFAE+FE +P+ LAEN+G+ A E+IS LYA H G VG D+E
Sbjct: 427 GETCPGLDQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGFDIEAEA 486
Query: 487 CA--DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDED 544
A D+ + D Y+ K++ +K A +AA TVLRVDQIIMAKPAGGP+ P G D D
Sbjct: 487 AAVKDMLEAGILDTYLGKYWGIKLATNAAVTVLRVDQIIMAKPAGGPK---PPSGKKDWD 543
>sp|P42932|TCPQ_MOUSE T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3
Length = 548
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/540 (50%), Positives = 390/540 (72%), Gaps = 10/540 (1%)
Query: 9 GIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68
G MLK+G KH SGL+EAV +NI ACK+L+ TRT+ GPNGMNKMVIN L+KLFVTNDA
Sbjct: 10 GFAQMLKDGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDA 69
Query: 69 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEII 128
ATI+ ELEVQHPAAK++V+A Q++E+GDG N + FAG +L+ AEEL+R+GL SE+I
Sbjct: 70 ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVI 129
Query: 129 SGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADAC 188
SGY A K E+L ELV ++N+ R+ +EV ++ ++ SKQ+G E L LIA AC
Sbjct: 130 SGYEIACKKAHEILPELVCCSAKNL--RDVDEVSSLLRTSIMSKQYGSETFLAKLIAQAC 187
Query: 189 IQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGV 248
+ + P + NFNVDN+RV K+LG G+++S+++ GMV K + G + +++ AK+AV++
Sbjct: 188 VSIFP-DSGNFNVDNIRVCKILGSGIYSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 246
Query: 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCE 308
D TETKGTVLI AE+L N++K EE ++ +KA+A +GA VIV+G V ++ALH+
Sbjct: 247 DGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVIVTGGKVADIALHYAN 306
Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIVRNE 366
+Y +M+++++SK++LRR C+T GA A+ L P +++G+ DSV + E+G +V + ++E
Sbjct: 307 KYNIMLVRLNSKWDLRRLCKTVGATALPKLTPPVQEEMGHCDSVYLSEVGDTQVVVFKHE 366
Query: 367 GGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
++ST+VLRGSTD+++DD+ERAVDDGVNT+K + RD R+VPG ATEIELA+++ +
Sbjct: 367 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 426
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
GL+QYAI KFAE+FE +P+ LAEN+G+ A E+IS LY+ H G VG+D+E V
Sbjct: 427 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEV 486
Query: 487 CA--DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDED 544
A D+ ++ D Y+ K++A+K A +AA TVLRVDQIIMAKPAGGP+ P G D D
Sbjct: 487 PAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPK---PPSGKKDWD 543
>sp|Q3ZCI9|TCPQ_BOVIN T-complex protein 1 subunit theta OS=Bos taurus GN=CCT8 PE=1 SV=3
Length = 548
Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust.
Identities = 277/540 (51%), Positives = 390/540 (72%), Gaps = 10/540 (1%)
Query: 9 GIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68
G MLKEG KH SGL+EAV +NI ACK+L+ TRT+ GPNGMNKMVINHL+KLFVTNDA
Sbjct: 10 GFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDA 69
Query: 69 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEII 128
ATI+ ELEVQHPAAK++V+A Q++E+GDG N + FAG +L+ AEEL+R+GL SE+I
Sbjct: 70 ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVI 129
Query: 129 SGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADAC 188
GY A K E+L +LV ++N+ R+ +EV + +V SKQ+G E L LIA AC
Sbjct: 130 EGYEIACKKAHEILPDLVCCSAKNL--RDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQAC 187
Query: 189 IQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGV 248
+ + P + +FNVDN+RV K+LG G+H+S+++ GMV K + G + +++ AK+AV++
Sbjct: 188 VSIFP-DSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 246
Query: 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCE 308
D TETKGTVLI +AE+L N++K EE ++ +KA+A++GA V+V+G V +MALH+
Sbjct: 247 DGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYAN 306
Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIVRNE 366
+Y +M+++++SK++LRR C+T GA A+ L P +++G+ DSV + E+G +V + ++E
Sbjct: 307 KYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHE 366
Query: 367 GGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
++ST+VLRGSTD+++DD+ERAVDDGVNT+K + RD R+VPG ATEIELA+++ +
Sbjct: 367 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 426
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
GL+QYAI KFAE+FE +P+ LAEN+G+ A E+IS LYA H G VG+D+E V
Sbjct: 427 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEV 486
Query: 487 CA--DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDED 544
A D+ V D Y+ K++A+K A +AA TVLRVDQIIMAKPAGGP+ P G D D
Sbjct: 487 PAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPK---PPSGKKDWD 543
>sp|A8X6I9|TCPQ_CAEBR T-complex protein 1 subunit theta OS=Caenorhabditis briggsae
GN=cct-8 PE=3 SV=1
Length = 548
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/547 (46%), Positives = 372/547 (68%), Gaps = 9/547 (1%)
Query: 1 MGFSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 60
M + G +KEG +H G DEAV +NI+AC +L++ R++ GPNGMNKMVINH++
Sbjct: 1 MAMKIPKSGYNRFMKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIE 60
Query: 61 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRM 120
KLFVTNDAATI+ ELE+QHPAAK++++A + Q+++IGD N + A +L+ A LI M
Sbjct: 61 KLFVTNDAATILKELEIQHPAAKIIIMATEMQEKQIGDNTNTVVILAAALLEHASNLINM 120
Query: 121 GLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEIL 180
G+ P E+ +GY +A K +E+L LV + E D++N EEV +++A+ SKQ+ E+++
Sbjct: 121 GMTPQEVAAGYEQAAEKALEILPSLVVK--EASDMKNIEEVRQYLRSAITSKQYDNEDVI 178
Query: 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAK 240
L+A AC+ CP N NFNVDN+R+ K++G G+H S ++ GMV K A G I++ + A+
Sbjct: 179 ADLVAKACVTTCPANSYNFNVDNIRICKIIGSGVHTSKVMNGMVFKRGAEGEIRSAQDAR 238
Query: 241 VAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVG 300
+AV+ D + TETKGTVLI NA++L N++K EE++VE +KA+A++G +V+V+ G
Sbjct: 239 IAVYTCPFDLTQTETKGTVLIENADELVNFSKGEESEVEEQVKAIADNGVKVVVAAGKFG 298
Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAV--AMLCQPNPDDLGYVDSVSVEEIGGA 358
++ LHF +YK+M ++++SKF+LRR CRT GA A +C P + LG+ DSVSV EIG
Sbjct: 299 DLYLHFLNKYKIMAVRLTSKFDLRRLCRTVGAQPQARICAPAVNLLGHCDSVSVTEIGDE 358
Query: 359 RVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 418
V + V+T+++RGS+ S +DD+ERAVDD VNTYKA+ +D +++ GA A EIE
Sbjct: 359 NVVVFDKNSETGKVATIIIRGSSQSRIDDVERAVDDAVNTYKALTKDGKLLAGAGAVEIE 418
Query: 419 LARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKV 478
LA+ ++ + K GL+QYAI KFA + E +PK +AENAG+ E ++ LYAEH +GK
Sbjct: 419 LAKEIESYGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHVNGKKNA 478
Query: 479 GIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPA-GGPRRDQQP 537
GID+ D N++DLY K A+K A DAA T+L+VDQIIMAK A GGP+ P
Sbjct: 479 GIDVWKREVMDAVAHNIFDLYAGKRLAIKLATDAAATILKVDQIIMAKQATGGPK----P 534
Query: 538 GGGMDED 544
G +D
Sbjct: 535 RGPKQQD 541
>sp|Q4R5J0|TCPQ_MACFA T-complex protein 1 subunit theta OS=Macaca fascicularis GN=CCT8
PE=2 SV=1
Length = 548
Score = 523 bits (1348), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/540 (50%), Positives = 389/540 (72%), Gaps = 10/540 (1%)
Query: 9 GIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68
G MLKEG KH SGL+EAV +NI ACK+L+ TRT+ GPNGMNKMVINHL+KLFVTNDA
Sbjct: 10 GFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDA 69
Query: 69 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEII 128
ATI+ ELEVQHPAAK++V+A Q++E+GDG N + FAG +L+ AEEL+R+GL SE+I
Sbjct: 70 ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVI 129
Query: 129 SGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADAC 188
GY A K E+L LV ++N+ R+ +EV ++ ++ SKQ+G E L LIA AC
Sbjct: 130 EGYEIACRKAHEILPNLVCCSAKNL--RDVDEVSSLLRTSIMSKQYGNEVFLAKLIAQAC 187
Query: 189 IQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGV 248
+ + P + +FNVDN+RV K+LG G+ +S+++ GMV K + G + +++ AK+AV++
Sbjct: 188 VSIFP-DSGHFNVDNIRVCKILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 246
Query: 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCE 308
D + TETKGTVLI AE+L N++K EE ++ +KA+A++GA V+V+G V +MALH+
Sbjct: 247 DGTITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADMALHYAN 306
Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIVRNE 366
+Y +M+++++SK++LRR C+T GA A+ L P +++G+ DSV + E+G +V + ++E
Sbjct: 307 KYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVCLSEVGDTQVVVFKHE 366
Query: 367 GGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
++ST+VLRGSTD+++DD+ERAVDDGVNT+K + RD R+VPG ATEIELA+++ +
Sbjct: 367 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 426
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
GL+QYAI KFAE+FE +P+ LAEN+G+ A E+IS LYA H G VG+D+E V
Sbjct: 427 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEV 486
Query: 487 CA--DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDED 544
A D+ + D Y+ K++A+K A +AA TVLRVDQIIMAKPAGGP+ P G D D
Sbjct: 487 PAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPK---PPSGKKDWD 543
>sp|Q9N358|TCPQ_CAEEL T-complex protein 1 subunit theta OS=Caenorhabditis elegans
GN=cct-8 PE=1 SV=3
Length = 548
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/549 (47%), Positives = 374/549 (68%), Gaps = 11/549 (2%)
Query: 1 MGFSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 60
M + G +KEG +H G DEAV +NI+AC +L++ R++ GPNGMNKMVINH++
Sbjct: 1 MAMKIPKSGYNRFMKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIE 60
Query: 61 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRM 120
KLFVTNDAATI+ ELE+QHPAA+++++A + Q+++IGD N + A +L+ A LI M
Sbjct: 61 KLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHM 120
Query: 121 GLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEIL 180
G+ P E+ +GY +A K +E+L LV + E D++N EEV +++A+ SKQ+ E+I+
Sbjct: 121 GMTPQEVAAGYEQAAEKALEILPTLVVK--EATDMKNIEEVRQYIRSAITSKQYDNEDII 178
Query: 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAK 240
L+A AC+ CP N NFNVDN+R+ K++G G+H ST++ GMV K A G I+ A+
Sbjct: 179 ADLVAKACVTTCPANSFNFNVDNIRICKIIGSGVHTSTVMNGMVFKRGAEGEIREARDAR 238
Query: 241 VAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVG 300
+AV+ D + TETKGTVLI NA++L N++K EEA+VE +KA+A++G +V+V+ G
Sbjct: 239 IAVYTCPFDLTQTETKGTVLIENADELRNFSKGEEAEVEEQVKAIADNGVKVVVAAGKFG 298
Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAV--AMLCQPNPDDLGYVDSVSVEEIGGA 358
+M LHF +YK+M ++++SKF+LRR CRT GA A +C P + LG+ DSV+V+EIG
Sbjct: 299 DMYLHFLNKYKIMAVRLTSKFDLRRLCRTVGAQPQARICAPAVNLLGHCDSVAVQEIGDE 358
Query: 359 RVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 418
V + + V+T+++RGS+ S +DD+ERAVDD VNTYKA+ +D +++ GA A EIE
Sbjct: 359 NVVVFDKKSETGKVATIIIRGSSQSRIDDVERAVDDAVNTYKALTKDGKLLAGAGAVEIE 418
Query: 419 LARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKV 478
LA+ ++ F K GL+QYAI KFA + E +PK +AENAG+ E ++ LYAEH +GK
Sbjct: 419 LAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHVAGKKNA 478
Query: 479 GIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPA-GGPRRDQQP 537
GID+ D N++DLY K A+K A DAA T+L+VDQIIM+K A GGP+ P
Sbjct: 479 GIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQIIMSKQATGGPK----P 534
Query: 538 GG--GMDED 544
G DED
Sbjct: 535 RGPKAQDED 543
>sp|Q5RAP1|TCPQ_PONAB T-complex protein 1 subunit theta OS=Pongo abelii GN=CCT8 PE=2 SV=3
Length = 548
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/540 (50%), Positives = 388/540 (71%), Gaps = 10/540 (1%)
Query: 9 GIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68
G MLKEG KH SGL+EAV +NI ACK+L+ TRT+ GPNGMNKMVINHL+KLFVTNDA
Sbjct: 10 GFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDA 69
Query: 69 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEII 128
ATI+ ELEVQHPAAK++V+A Q++E+GDG N + FAG +L+ AEEL+R+GL SE+I
Sbjct: 70 ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVI 129
Query: 129 SGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADAC 188
GY A K E+L LV ++N+ R+ +EV ++ ++ SKQ+G E L LIA AC
Sbjct: 130 EGYEIACRKAHEILPNLVCCSAKNL--RDIDEVSSLLRTSIMSKQYGNEVFLAKLIAQAC 187
Query: 189 IQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGV 248
+ + P + +FNVDN+RV K+LG G+ +S+++ GMV K + G + +++ AK+AV++
Sbjct: 188 VSIFP-DSGHFNVDNIRVCKILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 246
Query: 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCE 308
D TETKGTVLI AE+L N++K EE ++ +KA+A++GA V+V+G V +MALH+
Sbjct: 247 DGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADMALHYAN 306
Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIVRNE 366
+Y +M+++++SK++LRR C+T GA A+ L P +++G+ DSV + E+G +V + ++E
Sbjct: 307 KYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVYLSEVGDTQVVVFKHE 366
Query: 367 GGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
++ST+VLRGSTD+++DD+ERAVDDGVNT+K + RD R+VPG ATEIELA+++ +
Sbjct: 367 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 426
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
GL+QYAI KFAE+FE +P+ LAEN+G+ A E+IS LYA H G VG+D+E V
Sbjct: 427 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEV 486
Query: 487 CA--DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDED 544
A D+ + D Y+ K++A+K A +AA TVLRVDQIIMAKPAGGP+ P G D D
Sbjct: 487 PAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPK---PPSGKKDWD 543
>sp|P50990|TCPQ_HUMAN T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4
Length = 548
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/540 (50%), Positives = 388/540 (71%), Gaps = 10/540 (1%)
Query: 9 GIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68
G MLKEG KH SGL+EAV +NI ACK+L+ TRT+ GPNGMNKMVINHL+KLFVTNDA
Sbjct: 10 GFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDA 69
Query: 69 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEII 128
ATI+ ELEVQHPAAK++V+A Q++E+GDG N + FAG +L+ AEEL+R+GL SE+I
Sbjct: 70 ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVI 129
Query: 129 SGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADAC 188
GY A K E+L LV ++N+ R+ +EV ++ ++ SKQ+G E L LIA AC
Sbjct: 130 EGYEIACRKAHEILPNLVCCSAKNL--RDIDEVSSLLRTSIMSKQYGNEVFLAKLIAQAC 187
Query: 189 IQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGV 248
+ + P + +FNVDN+RV K+LG G+ +S+++ GMV K + G + +++ AK+AV++
Sbjct: 188 VSIFP-DSGHFNVDNIRVCKILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 246
Query: 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCE 308
D TETKGTVLI AE+L N++K EE ++ +KA+A++GA V+V+G V +MALH+
Sbjct: 247 DGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADMALHYAN 306
Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIVRNE 366
+Y +M+++++SK++LRR C+T GA A+ L P +++G+ DSV + E+G +V + ++E
Sbjct: 307 KYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVYLSEVGDTQVVVFKHE 366
Query: 367 GGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
++ST+VLRGSTD+++DD+ERAVDDGVNT+K + RD R+VPG ATEIELA+++ +
Sbjct: 367 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 426
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
GL+QYAI KFAE+FE +P+ LAEN+G+ A E+IS LYA H G VG+D+E V
Sbjct: 427 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEV 486
Query: 487 CA--DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDED 544
A D+ + D Y+ K++A+K A +AA TVLRVDQIIMAKPAGGP+ P G D D
Sbjct: 487 PAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPK---PPSGKKDWD 543
>sp|P78921|TCPQ_SCHPO Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct8 PE=2 SV=3
Length = 546
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/518 (45%), Positives = 357/518 (68%), Gaps = 7/518 (1%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+ +EG++ M G+++AV++N +A ++LS ITRTSLGPNG NK+V+NHL + F+TNDAATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
ELEV HPAAKL+V A + Q+ E+GD AN + F GE+L AE +IRMGL P EI GY
Sbjct: 73 RELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYE 132
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADACIQVC 192
A++ T+EVLEE+ + E V + +E+I ++ ++SKQ+G E+ L L+A A + V
Sbjct: 133 MALSHTMEVLEEICADKIET--VESEKELIKAIRTCISSKQYGNEDFLSDLVAKAILTVL 190
Query: 193 PKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGVDTSA 252
PK+P+ FNVDN+RV K++G L+NS +V+GMV + G++ ++AKVAVF+ +D S
Sbjct: 191 PKDPSKFNVDNIRVVKIMGSSLYNSQVVKGMVFPREPEGTVTRSKEAKVAVFSCPLDISQ 250
Query: 253 TETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKL 312
TETKGTVL+HNA+++ +++K EE +E IK + ++G V+V+ V ++ LH+ R+++
Sbjct: 251 TETKGTVLLHNAQEMLDFSKGEENLIESHIKEIYDAGVRVVVTSGNVNDLVLHYLNRFEI 310
Query: 313 MVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGN 370
+V+++ SKFELRR CR GA +A + P P+++G VD V EIGG RVT+ R
Sbjct: 311 LVIRVPSKFELRRLCRVVGATPLARMGVPMPEEMGSVDVVETIEIGGDRVTVFRQVEDIT 370
Query: 371 SVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKE 430
+T+VLRG+T + LDDLERA+DDGVN KA+ +D+R++ GA A++++L RL K
Sbjct: 371 RTATIVLRGATKTYLDDLERAIDDGVNIVKALVKDNRLIFGAGASDMQLCIRLISVGEKT 430
Query: 431 TGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLY-AEHASGKTKVGIDL--ENGVC 487
G+ Q+AI ++ E+FE+VP+T++ENAGL+ ++IS LY A H +G+D+ EN
Sbjct: 431 PGIYQHAIKQYGEAFEVVPRTISENAGLDPTDVISKLYAAHHKENGESIGVDVECENDGT 490
Query: 488 ADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
D ++D+ + K A++ A + TVL VDQ++M+
Sbjct: 491 LDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVVMS 528
>sp|P47079|TCPQ_YEAST T-complex protein 1 subunit theta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT8 PE=1 SV=1
Length = 568
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/553 (44%), Positives = 364/553 (65%), Gaps = 28/553 (5%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+ K+G+ S D ++K+I A ++L + TS+GP G NK+++NHL K+ +TNDAAT++
Sbjct: 13 LFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATML 72
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
EL++ HPA K+LV+A + Q+ ++GDG NL + AGE+L +E+LI MGL EII GY
Sbjct: 73 RELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYN 132
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADACIQVC 192
A T++ L+E+V E D + E++ +K ++SK++G E+IL L+++A V
Sbjct: 133 MARKFTLKELDEMVV--GEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVL 190
Query: 193 P-----KNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNM---EKAKVAVF 244
P FNVD++RV K++GG L NST+++GMV + G +K++ +K KVAVF
Sbjct: 191 PVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPEGHVKSLSEDKKHKVAVF 250
Query: 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMAL 304
+D + TETKGTVL+HNA+++ +++K EE +++ ++K +A+ G E IV+GA VGE+AL
Sbjct: 251 TCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELAL 310
Query: 305 HFCERYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTI 362
H+ RY ++VLK+ SKFELRR CR GA + L P P++LG V++V EIGG RVT+
Sbjct: 311 HYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTV 370
Query: 363 VRNEGGGNS-VSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDS--RIVPGAAATEIEL 419
+ E G S ST++LRG+T + LDD+ERA+DDGV K + + S +++PGA ATEIEL
Sbjct: 371 FKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIEL 430
Query: 420 ARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEH---ASGKT 476
R+ ++ + GL Q AI +FA +FE+VP+TLAE AGL+ E++ +LYA H G
Sbjct: 431 ISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAV 490
Query: 477 KV-----GIDL----ENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKP 527
K G+D+ + GV DI N++D+ TK FA+ A +AA TVL +DQIIMAK
Sbjct: 491 KTDHLYKGVDIDGESDEGV-KDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKK 549
Query: 528 AGGPRRDQQPGGG 540
AGGPR Q P G
Sbjct: 550 AGGPRAPQGPRPG 562
>sp|P47828|TCPQ_CANAX T-complex protein 1 subunit theta OS=Candida albicans GN=CCT8 PE=3
SV=2
Length = 540
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/549 (39%), Positives = 339/549 (61%), Gaps = 39/549 (7%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+ K+G+ S D A+++N++A +++++I TS+GP+G NK+++N L K F+TNDAAT++
Sbjct: 13 LFKQGYSSFSNADGAIIRNVEAVREIASILLTSMGPSGRNKIIVNKLGKKFITNDAATML 72
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
NELE+ HP K+L+ A K Q+ E+GD NL I AGE L AE+L+ +GL+ SEII G+
Sbjct: 73 NELEIVHPVVKILIQASKQQEFEMGDNTNLVIILAGEFLNVAEKLLTLGLNVSEIIQGFN 132
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEILCPLIADACIQVC 192
A ++ L+ELV E E+ + +++ +K +A+KQ+G E+ + L+ DA V
Sbjct: 133 LANKFVMKTLDELVVEKVESFET----DLLKAVKPVIAAKQYGVEDTIAKLVVDAVALVM 188
Query: 193 PKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGVDTSA 252
KN +FNVDN+RV K++G L S +V+GMV + G++KN ++ + S
Sbjct: 189 -KN-GSFNVDNIRVVKVMGASLSQSQVVKGMVFPREPEGTVKNADQIQ----------SC 236
Query: 253 TETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAES-------------GAEVIVSGAAV 299
+ H+ Q Y+ + + LI A++ G ++ G++V
Sbjct: 237 RVYQPHRYFHHRNQ--RYSCSSTMPRKCLISPRAKNNSWTSCARKSTIQGLRWLLPGSSV 294
Query: 300 GEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGG 357
GE+ALH+ +Y ++VL++ SKF+LRR C+ GA + L P PD++G +D + +EIGG
Sbjct: 295 GELALHYLNKYGILVLRVPSKFDLRRICQVCGATPLPRLGAPTPDEMGEIDIIETKEIGG 354
Query: 358 ARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEI 417
RVTI R + + +T+V+RG+T + LDD+ERA+DDGVN+ K + +D+R++PGA A EI
Sbjct: 355 DRVTIFRQDESSSRTATIVVRGATQNNLDDIERAIDDGVNSIKGLIKDNRLLPGAGAVEI 414
Query: 418 ELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGK-T 476
EL +R+ + GL Q AI FA++FE++P+ LAE +G ++ EI+S L+A HA
Sbjct: 415 ELMKRITAYQ-STPGLLQLAIKSFAKAFEVIPRVLAETSGHDSSEILSKLHAAHAEDTGL 473
Query: 477 KVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQ 536
+ GID+++G AD + V D+ TK A+ A DA T+L +DQIIMAK AGGP QQ
Sbjct: 474 RAGIDIDSGEVADTA---VLDILATKKSAIDLAVDATNTILSIDQIIMAKRAGGPVMPQQ 530
Query: 537 P-GGGMDED 544
P G D+D
Sbjct: 531 PRPGNWDQD 539
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 304/532 (57%), Gaps = 18/532 (3%)
Query: 3 FSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKL 62
S QP I L EG + G D L NI A + ++ RT+LGP GM+KM+++ L +
Sbjct: 4 LSGQPVVI---LPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDI 59
Query: 63 FVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGL 122
VTND ATI++++++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +
Sbjct: 60 VVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNI 119
Query: 123 HPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQF-GQEEILC 181
HPS II GY A K E+L+E+ + +D + E ++ ++ K +E+L
Sbjct: 120 HPSIIIKGYALAAEKAQEILDEI----AIRVDPDDEETLLKIAATSITGKNAESHKELLA 175
Query: 182 PLIADACIQVCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGS--IKNME 237
L +A QV K + ++DN++ K G G+ S +VRG+V+ + V K +E
Sbjct: 176 KLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVE 235
Query: 238 KAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGA 297
AK+A+ ++ TET + I + +QL ++ + EE ++ ++ +A++GA V+
Sbjct: 236 NAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQK 295
Query: 298 AVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEI 355
+ ++A H+ +Y +M ++ K ++ + + TGA V + P+DLGY + V ++
Sbjct: 296 GIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKL 355
Query: 356 GGARVTIVRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAA 414
G + V EG N + T+++RG T+ ++D++ERA++D V K + D ++P A
Sbjct: 356 AGENMIFV--EGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGA 413
Query: 415 TEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASG 474
EIELA RL E++ + G + AI FA++ +++PKTLAENAGL+ +E++ + +EH +
Sbjct: 414 PEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNR 473
Query: 475 KTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
+GID+ G AD+ + + K A+K A++AA +LR+D +I AK
Sbjct: 474 GLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 304/532 (57%), Gaps = 18/532 (3%)
Query: 3 FSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKL 62
S QP I L EG + G D L NI A + ++ RT+LGP GM+KM+++ L +
Sbjct: 4 LSGQPVVI---LPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDI 59
Query: 63 FVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGL 122
VTND ATI++++++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +
Sbjct: 60 VVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNI 119
Query: 123 HPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQF-GQEEILC 181
HPS II GY A K E+L+E+ + +D + E ++ ++ K +E+L
Sbjct: 120 HPSIIIKGYALAAEKAQEILDEI----AIRVDPDDEETLLKIAATSITGKNAESHKELLA 175
Query: 182 PLIADACIQVCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGS--IKNME 237
L +A QV K + ++DN++ K G G+ S +VRG+V+ + V K +E
Sbjct: 176 KLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVE 235
Query: 238 KAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGA 297
AK+A+ ++ TET + I + +QL ++ + EE ++ ++ +A++GA V+
Sbjct: 236 NAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQK 295
Query: 298 AVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEI 355
+ ++A H+ +Y +M ++ K ++ + + TGA V + P+DLGY + V ++
Sbjct: 296 GIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKL 355
Query: 356 GGARVTIVRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAA 414
G + V EG N + T+++RG T+ ++D++ERA++D V K + D ++P A
Sbjct: 356 AGENMIFV--EGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGA 413
Query: 415 TEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASG 474
EIELA RL E++ + G + AI FA++ +++PKTLAENAGL+ +E++ + +EH +
Sbjct: 414 PEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNR 473
Query: 475 KTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
+GID+ G AD+ + + K A+K A++AA +LR+D +I AK
Sbjct: 474 GLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 297/523 (56%), Gaps = 17/523 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L EG + G D A NI A + ++ RT+LGP GM+KM+++ L + +TND ATI+
Sbjct: 11 ILPEGTQRYVGRD-AQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
+E+++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +HPS +I GY
Sbjct: 70 DEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYM 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYR--MKAAVASKQFGQEEILCPLIADACIQ 190
A K E+L+ + +E + EEV+ + M A + E L L +A
Sbjct: 130 LAAEKAQEILDSIAKEVKPD-----DEEVLLKAAMTAITGKAAEEEREYLAKLAVEAVKL 184
Query: 191 VCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAG 246
V + F ++DN++ K GG + ++ ++RG+V+ + V G K +EKAK+A+
Sbjct: 185 VAEEKDGKFKVDIDNIKFEKKEGGAVSDTKLIRGVVIDKEVVHPGMPKRVEKAKIALIND 244
Query: 247 GVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHF 306
++ TET + I + EQL+ + + EE ++ ++ + E GA V+ + ++A H+
Sbjct: 245 ALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHY 304
Query: 307 CERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVR 364
+Y ++ ++ K ++ + + TGA V + P+DLG + V ++ G + V
Sbjct: 305 LAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFV- 363
Query: 365 NEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRL 423
EG N + T+++RG T+ ++D++ERA++D V K + D +I+ G A EIEL+ +L
Sbjct: 364 -EGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKL 422
Query: 424 KEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLE 483
E++ + G +Q AI FAE+ +++P+TLAENAGL+ +E + + A H +GID+
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGIDVY 482
Query: 484 NGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
G AD+ V + K A+K A++AA +LR+D +I A+
Sbjct: 483 EGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAAQ 525
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 297/522 (56%), Gaps = 17/522 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L EG + G D A NI A + ++ RT+LGP GM+KM+++ L + +TND ATI+
Sbjct: 11 ILPEGTQRYVGRD-AQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
+E+++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +HPS II GYT
Sbjct: 70 DEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYT 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYR--MKAAVASKQFGQEEILCPLIADACIQ 190
A K E+L+ + +E + EEV+ + M A + E L L +A
Sbjct: 130 LASQKAQEILDSIAKEVKPD-----DEEVLLKAAMTAITGKAAEEEREYLAKLAVEAVKL 184
Query: 191 VCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAG 246
V + ++DN+++ K GG + ++ ++RG+V+ + V G K +E AK+A+
Sbjct: 185 VAEEKDGKLKVDIDNIKLEKKEGGAVRDTRLIRGVVIDKEVVHPGMPKRIENAKIALIND 244
Query: 247 GVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHF 306
++ TET + I + EQL+ + + EE ++ ++ + E GA V+ + ++A H+
Sbjct: 245 ALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHY 304
Query: 307 CERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVR 364
+Y ++ ++ K ++ + + TGA V + P+DLG + V ++ G + V
Sbjct: 305 LAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFV- 363
Query: 365 NEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRL 423
EG N + T+++RG T+ ++D++ERA++D + K + D +I+ G A+EIEL+ +L
Sbjct: 364 -EGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKL 422
Query: 424 KEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLE 483
E++ + G +Q AI FAE+ +++P+TLAENAGL+ +E + + A H +GID+
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGQTIGIDVY 482
Query: 484 NGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
G AD+ V + K A+K A++AA +LR+D +I A
Sbjct: 483 EGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAA 524
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 294 bits (753), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 305/543 (56%), Gaps = 24/543 (4%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L EG + G D L NI A + ++ RT+LGP GM+KM+++ L + +TND ATI+
Sbjct: 11 ILPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
+E+++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +HPS II GY
Sbjct: 70 DEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYA 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVAS---KQFGQE-EILCPLIADAC 188
A K E+L+E+ ++++DV + E KAAV S K +E E L + +A
Sbjct: 130 LAAEKAQEILDEI----AKDVDVEDRE---ILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 189 IQVCPKNPANFNV--DNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVF 244
QV K + V DN++ K GG + ++ +++G+V+ + V G K +E AK+A+
Sbjct: 183 KQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALI 242
Query: 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMAL 304
++ TET + I + EQL+ + + EE + ++ + E GA V+ + ++A
Sbjct: 243 NEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQ 302
Query: 305 HFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTI 362
H+ +Y +M ++ K ++ + + TGA V + P+DLG + V ++ G +
Sbjct: 303 HYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIF 362
Query: 363 VRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELAR 421
V EG N + T+++RG T+ ++D++ERA++D V K + D +IV A EIELA
Sbjct: 363 V--EGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAI 420
Query: 422 RLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGID 481
RL E++ + G +Q AI FAE+ +++P+TLAENAGL+ +E + + A H +G+D
Sbjct: 421 RLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVD 480
Query: 482 LENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGM 541
+ G AD+ V A+K A++AA +LR+D +I A +D++ G G
Sbjct: 481 VFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKL---EKDKEGGKGG 537
Query: 542 DED 544
ED
Sbjct: 538 SED 540
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 302/541 (55%), Gaps = 23/541 (4%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L EG + G D L NI A + ++ RT+LGP GM+KM+++ L + +TND ATI+
Sbjct: 11 ILPEGTQRYVGRDAQRL-NILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
+E+++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +HPS II GY
Sbjct: 70 DEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYA 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVAS---KQFGQE-EILCPLIADAC 188
A K E+LE + +E S + DV + KAAV S K +E E L + +A
Sbjct: 130 LAAEKAQEILEGIAKEVSPD-DVETLK------KAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 189 IQVCPK--NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVF 244
QV K + ++DN++ K G +H + ++RG+V+ + V G K +E AK+A+
Sbjct: 183 RQVAEKVGDKYKVDLDNIKFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIALI 242
Query: 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMAL 304
++ TET + I + EQL+ + + EE + ++ + E GA V+ + ++A
Sbjct: 243 NDALEVKETETDAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKGIDDLAQ 302
Query: 305 HFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTI 362
H+ +Y +M ++ K ++ + + TGA V + P+DLG + V ++ G +
Sbjct: 303 HYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIF 362
Query: 363 VRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELAR 421
V EG N + T+++RG T+ ++D++ERA++D V K + D +I+P A EIELA
Sbjct: 363 V--EGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAI 420
Query: 422 RLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGID 481
+L E++ + G +Q AI FAE+ +++P+TLAENAGL+ +E + + A H +G+D
Sbjct: 421 KLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKEKGPTIGVD 480
Query: 482 LENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGM 541
+ G AD+ V A+K A++AA +LR+D +I A + D+ GG
Sbjct: 481 VFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEDK--GGSN 538
Query: 542 D 542
D
Sbjct: 539 D 539
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 308/528 (58%), Gaps = 21/528 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LKEG + G EA+ NI A + L+ + ++SLGP G++KM+++ + VTND ATIV
Sbjct: 10 ILKEGTQRTYG-REALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIV 68
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E+E+QHPAAKLLV KAQ E+GDG + AG +L+ AE+L+ LHP+ II GYT
Sbjct: 69 KEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYT 128
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRM-KAAVASKQFG---QEEILCPLIADAC 188
KA+ + + LV+E + ++V + + V+ R+ + +ASK G + + + ++ DA
Sbjct: 129 KAMEEALR----LVDEAAVPVEVED-DSVLRRIAETTLASKFVGTGPERDKIISMVIDAI 183
Query: 189 IQVCPKNP---ANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSI--KNMEKAKVAV 243
V K P ++D V++ K GG L +S +VRG+VL + V K +E AK+ V
Sbjct: 184 RTVAEKRPDGGYEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENAKILV 243
Query: 244 FAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMA 303
++ E + + + E+LE++ + E + +++ +A +GA V+++ + E+A
Sbjct: 244 LDAPLEVQKPELTTKIRVTDIEKLESFLEEETRMLRDMVEKIAATGANVVITQKGIDEVA 303
Query: 304 LHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVT 361
HF + ++ ++ + ++ + + TGA V L P+ LGY + V ++G ++
Sbjct: 304 QHFLAKKGILAVRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGYAELVEERKVGEDKMV 363
Query: 362 IVRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELA 420
+ EG N S T++LRG+ D +LD+ ER + D ++ + + R+ +IV G A E+ELA
Sbjct: 364 FI--EGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELA 421
Query: 421 RRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGI 480
+LKEF+ G Q AI +AE+ E +P LAE+AG++A+E + L + H+ G G+
Sbjct: 422 LKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQGYKFAGV 481
Query: 481 D-LENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKP 527
+ LE + D++ +NV++ + K +K A++AA ++L++D +I A P
Sbjct: 482 NVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILKIDDVIAAAP 529
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 305/543 (56%), Gaps = 24/543 (4%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L EG + G D L NI A + ++ RT+LGP GM+KM+++ L + +TND ATI+
Sbjct: 11 ILPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
+E+++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +HPS II GY
Sbjct: 70 DEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYA 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVAS---KQFGQE-EILCPLIADAC 188
A K E+L+E+ ++++DV + E KAAV S K +E E L + +A
Sbjct: 130 LAAEKAQEILDEI----AKDVDVEDRE---ILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 189 IQVCPKNPANFNV--DNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVF 244
QV K + V DN++ K GG + ++ +++G+V+ + V G K +E AK+A+
Sbjct: 183 KQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALI 242
Query: 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMAL 304
++ TET + I + EQL+ + + EE + ++ + E GA V+ + ++A
Sbjct: 243 NEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQ 302
Query: 305 HFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTI 362
H+ +Y +M ++ K ++ + + TGA V + P+DLG + V ++ G +
Sbjct: 303 HYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIF 362
Query: 363 VRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELAR 421
V EG N + T+++RG T+ ++D++ERA++D V K + D +IV A EIEL+
Sbjct: 363 V--EGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSI 420
Query: 422 RLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGID 481
RL E++ + G +Q AI FAE+ +++P+TLAENAGL+ +E + + A H +G+D
Sbjct: 421 RLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVD 480
Query: 482 LENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGM 541
+ G AD+ V A+K A++AA +LR+D +I A +D++ G G
Sbjct: 481 VFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKL---EKDKEGGKGG 537
Query: 542 DED 544
ED
Sbjct: 538 SED 540
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 291 bits (746), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 311/556 (55%), Gaps = 29/556 (5%)
Query: 3 FSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKL 62
S QP I L EG + G D L NI A + ++ RT+LGP GM+KM+++ L +
Sbjct: 4 LSGQPVVI---LPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDI 59
Query: 63 FVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGL 122
VTND ATI++++++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +
Sbjct: 60 VVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNI 119
Query: 123 HPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYR--MKAAVASKQFGQEEIL 180
HPS II GY A K E+LEE+ + + + EE + R M + +E+L
Sbjct: 120 HPSIIIKGYALAAEKAQEILEEIAIKVNP-----DDEETLLRIAMTSITGKNAESHKELL 174
Query: 181 CPLIADACIQVCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGS--IKNM 236
L DA QV K + ++DN++ K G G+ S +VRG+V+ + V K +
Sbjct: 175 AKLAVDAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRV 234
Query: 237 EKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSG 296
E AK+A+ ++ TET + I + +QL ++ + EE ++ ++ +A++GA V+
Sbjct: 235 EGAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQ 294
Query: 297 AAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEE 354
+ ++A H+ +Y +M ++ K ++ + + TGA V + P+DLGY + V +
Sbjct: 295 KGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERK 354
Query: 355 IGGARVTIVRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAA 413
+ G + V EG N + T+++RG T+ ++D++ERA++D V K + D ++P
Sbjct: 355 LAGENMIFV--EGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGG 412
Query: 414 ATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHAS 473
A EIELA + E++ + G + AI FA++ +++PKTLAENAGL+ +EI+ + +EH +
Sbjct: 413 APEIELAISVDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVISEHKN 472
Query: 474 GKTKVGIDLENGVCADISTMNVW-DLYVTKFFALKYAADAACTVLRVDQIIMA---KPAG 529
+GID+ G AD+ + L VTK A+K +A AA +LR+D +I A KP G
Sbjct: 473 KGLGIGIDVFAGEPADMLERGIIAPLRVTK-QAIK-SARAAIMILRIDDVIAAKVSKPEG 530
Query: 530 GPRRDQQPG---GGMD 542
+ P GGMD
Sbjct: 531 RQGAECPPNGCMGGMD 546
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 291 bits (745), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 296/533 (55%), Gaps = 25/533 (4%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LKEG +G D A+ NI A K L+ + R+SLGP G++KM+I+ + +TND ATIV
Sbjct: 7 LLKEGTSRTTGRD-ALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIV 65
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
++E+QHPAAKLLV A KAQ E+GDG + AG +L+ AE L+ +HP+ II GY
Sbjct: 66 KDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYK 125
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYR---MKAA---VASKQFGQ-EEI--LCPL 183
KA K +E+L +L +D+R+ + R K A +ASK + E+ + +
Sbjct: 126 KAYTKALELLPQL----GTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDM 181
Query: 184 IADACIQVC---PKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEK 238
+ DA + V P N ++D +++ K GG + +S +V+G+VL + V G + + K
Sbjct: 182 VIDAIVNVAEPLPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTK 241
Query: 239 AKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAA 298
AK+AV ++ E + I + EQ++ + E ++ ++ +A GA V++
Sbjct: 242 AKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQKG 301
Query: 299 VGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIG 356
+ ++A HF + ++ ++ + ++ + + GA ++ + PDDLGY + V +G
Sbjct: 302 IDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDDLGYAELVEERRVG 361
Query: 357 GARVTIVRNEGGGN-SVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAAT 415
++ + EG N ++LRGS D LD+ ER+++D ++ + + + I+PG A
Sbjct: 362 NDKMVFI--EGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAI 419
Query: 416 EIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGK 475
E+ELA +L+E++ G +Q AI FA++ E +P LAE AGL A+ + L A HA G
Sbjct: 420 ELELAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKGL 479
Query: 476 TKVGIDLENG-VCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKP 527
T G+D+ G + D+ +N+ + K LK A +AA +L++D +I A P
Sbjct: 480 TNTGVDVIGGKIVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLIAAAP 532
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 301/550 (54%), Gaps = 30/550 (5%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LKEG +G D A+ NI A K L+ + R+SLGP G++KM+I+ + +TND ATIV
Sbjct: 7 LLKEGTSRTTGRD-ALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIV 65
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
++E+QHPAAKLLV A KAQ E+GDG + AG +L+ AE L+ +HP+ II GY
Sbjct: 66 KDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYK 125
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMK------AAVASKQFGQ-EEI--LCPL 183
KA NK +E+L +L +D+++ + R +ASK + E+ + +
Sbjct: 126 KAYNKALELLPQL----GTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDM 181
Query: 184 IADACIQVC---PKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEK 238
+ DA + V P N ++D +++ K GG + +S +V+G+VL + V G + + K
Sbjct: 182 VIDAIVNVAEPLPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTK 241
Query: 239 AKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAA 298
AK+AV ++ E + I + EQ++ + E ++ ++ +A GA V++
Sbjct: 242 AKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQKG 301
Query: 299 VGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIG 356
+ ++A HF + ++ ++ + ++ + + GA ++ + P+DLGY + V +G
Sbjct: 302 IDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVG 361
Query: 357 GARVTIVRNEGGGN-SVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAAT 415
++ + EG N ++LRGS D LD+ ER+++D ++ + + + I+PG A
Sbjct: 362 NDKMVFI--EGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAI 419
Query: 416 EIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGK 475
E+ELA +L+E++ G +Q AI FA++ E +P LAE AGL A+ + L A HA G
Sbjct: 420 ELELAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARHAKGL 479
Query: 476 TKVGIDLENG-VCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKP-----AG 529
+ G+D+ G + D+ +N+ + K LK A +AA +L++D +I A P G
Sbjct: 480 SNTGVDVIGGKIVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLIAAAPLKSEKKG 539
Query: 530 GPRRDQQPGG 539
G ++ GG
Sbjct: 540 GEGSKEESGG 549
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 288 bits (737), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 295/532 (55%), Gaps = 26/532 (4%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+ KEG SG D A+ NI A L+ + ++SLGP G++KM+I+ + +TND ATIV
Sbjct: 7 LFKEGTSRSSGRD-ALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIV 65
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E+E+QHPAAKLLV A KAQ E+GDG + AG +L AEEL+ +HP+ II GY
Sbjct: 66 KEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYK 125
Query: 133 KAINKTIEVLEELVEEGSENMDVRN-----TEEVIYRMKAAVASKQF---GQEEI--LCP 182
KA+ K +E++++L S +DV + + + ++ + S +F G EEI +
Sbjct: 126 KALTKALEIIDQL----SLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIID 181
Query: 183 LIADACIQVCPKNP---ANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNME 237
L+ DA V K P N +D +++ K GG + +S +V G+VL + V G + +E
Sbjct: 182 LVIDAITIVAEKRPDGTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVE 241
Query: 238 KAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGA 297
KAK+AV ++ E + I + EQ++++ E ++ ++ +A GA V++
Sbjct: 242 KAKIAVLDAALEVEKPEISAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANVVICQK 301
Query: 298 AVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEI 355
+ ++A HF + ++ ++ + ++ + + GA ++ + P+DLGY + V I
Sbjct: 302 GIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRI 361
Query: 356 GGARVTIVRNEGGGNSVST-VVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAA 414
G ++ + EG N + ++LRGS D LD+ ER+++D +++ + + IV G A
Sbjct: 362 GNDKMVFI--EGAKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGA 419
Query: 415 TEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASG 474
E ELA RL+E++ G +Q AI KFAE+ E +P LAE AG+ ++ + L A HA G
Sbjct: 420 VESELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAKG 479
Query: 475 KTKVGIDLENGVCA-DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
GID NG A D+ +NV + K LK A +AA +L++D ++ A
Sbjct: 480 LVNSGIDAVNGKIADDMMKINVIEPVRVKSQVLKSAVEAATAILKIDDLVAA 531
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 304/533 (57%), Gaps = 25/533 (4%)
Query: 1 MGFSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 60
M QP + L EG G D A NI A K L+ RT+LGP GM+KM+++ L
Sbjct: 1 MAQGQQPILV---LPEGTSRYLGRD-AQRMNILAGKILAETVRTTLGPKGMDKMLVDSLG 56
Query: 61 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRM 120
+ VTND TI+ E++++HPAAK+LV K Q++E+GDG + AGE+L+ AE L+ M
Sbjct: 57 DIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEM 116
Query: 121 GLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAV-ASKQFGQE-- 177
+HP+ I GY +A K E+L+++ + S+ R+T MK A+ A G E
Sbjct: 117 EIHPTIIAMGYRQAAEKAQEILDDIAIDASD----RDT-----LMKVAMTAMTGKGTEKA 167
Query: 178 -EILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIK 234
E L LI DA QV + D++++ K G + +ST+V+G+++ + V G K
Sbjct: 168 REPLAELIVDAVKQV--EEDGEVEKDHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPK 225
Query: 235 NMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIV 294
+E AK+A+ ++ TE + I + Q++ + + EE + ++ ++ ++GA V+
Sbjct: 226 KVENAKIALLNCPIEVKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLF 285
Query: 295 SGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSV 352
+ ++A H+ + ++ ++ K ++ + + TGA V + +P+DLG VS
Sbjct: 286 CQKGIDDLAQHYLAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSE 345
Query: 353 EEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGA 412
++I G + V +V T+++RGST+ ++ ++ERA++D + A D ++V G
Sbjct: 346 KKISGEEMIFVEECKEPKAV-TILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGG 404
Query: 413 AATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHA 472
A EIE+A+RLK+++ +G +Q A++ FAE+ E+VPKTLAENAGL++++++ L A H
Sbjct: 405 GAPEIEIAKRLKDYADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHE 464
Query: 473 SGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
T +GID+ +G D+ V + + K A++ AA+AA +LR+D +I A
Sbjct: 465 ES-TYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVIAA 516
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 294/509 (57%), Gaps = 21/509 (4%)
Query: 26 EAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLL 85
EA NI A K L+ RT+LGP GM+KM+++ L + +TND TI+ E+++ HPAAK+L
Sbjct: 22 EAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAKML 81
Query: 86 VLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEEL 145
V K Q++E+GDG + AGE+L+ AE+LI MG+HP+ I GY A K E+LEE+
Sbjct: 82 VEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILEEI 141
Query: 146 VEEGSENMDVRNTEEVIYRMKAAV-ASKQFGQE---EILCPLIADACIQVCPKNPANFNV 201
E S+ R+T MK A+ A G E E L L+ DA +QV + +
Sbjct: 142 SMEASD----RDT-----LMKVAITAMTGKGSERAKEKLAELVVDAVMQV--EEDGEIDK 190
Query: 202 DNVRVAKLLGGGLHNSTIVRGMVL-KSDAVGSI-KNMEKAKVAVFAGGVDTSATETKGTV 259
DN+ + ++ G ++ S IV G+V+ KS A S+ K +EKA++A+ ++ ET +
Sbjct: 191 DNINIQRIQGASVNESRIVNGIVIDKSRADTSMPKRIEKARIALLKYPIEVKDLETDAKI 250
Query: 260 LIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISS 319
+ + Q++ + + EE + +++ + SGA V+ + ++ALH+ R +M LK
Sbjct: 251 RLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQKGIDDLALHYLSREGIMALKRVK 310
Query: 320 KFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVL 377
K +++R + TGA V + +DLG + ++I +T + ++S ++L
Sbjct: 311 KSDIKRIEKATGARLVTNIDDLTAEDLGEAGVIYEKKIFDEVLTFIEECRDPKAIS-IIL 369
Query: 378 RGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYA 437
RGST + +++ERA++D + + D +V G A E+E+AR+L+E++ +G +Q A
Sbjct: 370 RGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYADTISGREQLA 429
Query: 438 IAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWD 497
++ FA++ E+VPKTLAENAGL++++++ L A H +GID+ +G D+ V +
Sbjct: 430 VSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEESPY-MGIDVFDGNIVDMKEAGVIE 488
Query: 498 LYVTKFFALKYAADAACTVLRVDQIIMAK 526
K A++ AA+AA +LR+D +I A+
Sbjct: 489 PQRVKKQAIQSAAEAAEMILRIDDMIAAR 517
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 300/529 (56%), Gaps = 17/529 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LKEG + SG D A+ NI A L+ + ++SLGP G++KM+I+ + +TND ATIV
Sbjct: 8 LLKEGTQRSSGRD-ALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIV 66
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E+E+QHPAAKLLV A KAQ E+GDG + AG +L A++L+ +HP+ II GY
Sbjct: 67 KEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYK 126
Query: 133 KAINKTIEVLEELVEE-GSENMDVRNTEEVIYRMKAAVASKQF--GQEEI--LCPLIADA 187
KA+NK++E++++L + N++ T + + ++ S +F G EE+ + ++ DA
Sbjct: 127 KALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDA 186
Query: 188 CIQVC---PKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVA 242
V P+ N +D +++ K GG + +S +V G+VL + V G + +EKAK+A
Sbjct: 187 VSIVAEPLPEGGYNVPLDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPRRVEKAKIA 246
Query: 243 VFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEM 302
V ++ E + I + EQ++ + E ++ ++ +A GA V++ + ++
Sbjct: 247 VLDAALEVEKPEISAKISITSPEQIKAFLDEEAKYLKDMVDKLASIGANVVICQKGIDDV 306
Query: 303 ALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARV 360
A HF + ++ ++ + ++ + + GA ++ + P+DLGY + V +G ++
Sbjct: 307 AQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKM 366
Query: 361 TIVRNEGGGNSVST-VVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIEL 419
+ EG N + ++LRGS D LD+ ER+++D +++ + + IV G A E EL
Sbjct: 367 VFI--EGAKNPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVETEL 424
Query: 420 ARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVG 479
A RL+E++ G +Q AI KFAE+ E +P LAE AG+ ++ + L A+HA G G
Sbjct: 425 ALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQTLMDLRAKHAKGLINAG 484
Query: 480 IDLENGVCAD-ISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKP 527
+D+ NG AD + +NV + K LK A +AA +L++D +I A P
Sbjct: 485 VDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIAAAP 533
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 281 bits (719), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 295/534 (55%), Gaps = 21/534 (3%)
Query: 1 MGFSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 60
M MQ +L E + SG D A NI A K ++ RT+LGP GM+KM+++
Sbjct: 1 MSQRMQQGQPMIILGEDSQRTSGQD-AQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGG 59
Query: 61 KLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRM 120
++ VTND TI+ E+++ HPAA ++V + Q++E+GDG + AGE+L AE+L+
Sbjct: 60 QVVVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDS 119
Query: 121 GLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQE--- 177
+H + I GY +A K EVLE+ E +E+ E + ++ AA A G E
Sbjct: 120 DVHATTIAQGYRQAAEKAKEVLEDNAIEVTED-----DRETLTKI-AATAMTGKGAESAK 173
Query: 178 EILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNM- 236
++L L+ DA + V K+ + +NV + K++GG + NS +V G+++ + V +NM
Sbjct: 174 DLLSELVVDAVLAV--KDDDGIDTNNVSIEKVVGGTIDNSELVEGVIVDKERVD--ENMP 229
Query: 237 ---EKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVI 293
E A +A+ ++ TE V + + +QL+ + EE +++ ++ + E GA+ +
Sbjct: 230 YAVEDANIAILDDALEVRETEIDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAV 289
Query: 294 VSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVS 351
G + +MA H+ + ++ ++ + +L+R R TG V+ L DDLG+ SV
Sbjct: 290 FVGDGIDDMAQHYLAKEGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADDLGFAGSVG 349
Query: 352 VEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPG 411
+++GG V + SV T++LRG T+ ++D+LERA++D + + D +++PG
Sbjct: 350 QKDVGGDERIFVEDVEDAKSV-TLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPG 408
Query: 412 AAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEH 471
A E EL+ +L+EF+ G +Q A+ FAE+ +++P+TLAENAGL+ ++ + L + H
Sbjct: 409 GGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRH 468
Query: 472 ASGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
G+ G+D G D+ V + K A++ A +AA +LR+D +I A
Sbjct: 469 DGGEFAAGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVIAA 522
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 302/522 (57%), Gaps = 15/522 (2%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L EG++ G D A NI A + ++ RT+LGP GM+KM+++ + + VTND TI+
Sbjct: 13 ILPEGYQRFVGRD-AQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTIL 71
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E++++HPAAK++V K Q++E+GDG + AGE+L AE+L++ +HP+ I GY
Sbjct: 72 EEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYR 131
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRM-KAAVASKQFGQ-EEILCPLIADACIQ 190
A+ K E+LEE+ EE + EE + ++ K A+ K + + L L+ A Q
Sbjct: 132 MAVEKAEEILEEIAEEIDPD-----DEETLKKIAKTAMTGKGVEKARDYLAELVVKAVKQ 186
Query: 191 VCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAG 246
V + + D++++ K GGGL ++ +V+GMV+ + V G + +E AK+A+
Sbjct: 187 VAEEEDGEIVIDTDHIKLEKKEGGGLEDTELVKGMVIDKERVHPGMPRRVENAKIALLNC 246
Query: 247 GVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHF 306
++ TET + I + EQL+ + + EE + ++ +AE+GA V+ + ++A H+
Sbjct: 247 PIEVKETETDAEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQHY 306
Query: 307 CERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVR 364
+ ++ ++ K ++++ R TGA V + + +DLG + V +++ G ++ V
Sbjct: 307 LAKKGILAVRRVKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVAGDKMIFVE 366
Query: 365 NEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLK 424
+V T+++RG T+ ++D+ ERA++D + A D ++V G A E+E+AR+L+
Sbjct: 367 GCKDPKAV-TILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLR 425
Query: 425 EFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLEN 484
+F+ G +Q A+ FA++ E++P+TLAEN+GL+ ++++ L A+H G+ GID+ +
Sbjct: 426 DFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQVTAGIDVYD 485
Query: 485 GVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
G D+ V + K AL A +AA +LR+D +I A+
Sbjct: 486 GDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAAR 527
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 298/540 (55%), Gaps = 19/540 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L EG + G D L NI A + ++ RT+LGP GM+KM+++ L + +TND ATI+
Sbjct: 11 ILPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
+E+++QHPAAK++V K Q +E GDG + AGE+L+ AEEL+ +HPS II GY
Sbjct: 70 DEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYA 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQE-EILCPLIADACIQV 191
A K E+L+ + + ++DV + E + A+ K +E E L + +A QV
Sbjct: 130 LAAEKAQEILDSI----ARDVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAVKQV 185
Query: 192 CPKNPANFNV--DNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGG 247
K ++V DN++ K GG + ++ +++G+V+ + V G K +E AK+A+
Sbjct: 186 AEKVGDRYHVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMRKRVEGAKIALINEA 245
Query: 248 VDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFC 307
++ TET + I + EQL+ + + EE + ++ + E GA V+ + ++A H+
Sbjct: 246 LEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYL 305
Query: 308 ERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVRN 365
+Y +M ++ K ++ + + TGA V + P+DLG + V ++ G + V
Sbjct: 306 AKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFV-- 363
Query: 366 EGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLK 424
EG N + T+++RG T+ ++D++ERA++D V K + D +IV A EIELA +
Sbjct: 364 EGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVD 423
Query: 425 EFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLEN 484
E++ + G +Q AI FAE+ +++P+TLA NAGL+ +E + + A H +G+D+
Sbjct: 424 EYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKEKGPTIGVDVFE 483
Query: 485 GVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDED 544
G AD+ V A+K +A AA +LR+D +I A +D++ G G D
Sbjct: 484 GEPADMLERGVIAPVRVPKQAIK-SAKAAIMILRIDDVIAASKL---EKDKEGGKGGTRD 539
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 269 bits (688), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 290/529 (54%), Gaps = 21/529 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LKEG + G + A NI+A K ++ RT+LGP GM+KM+++ + + ++ND ATI+
Sbjct: 10 VLKEGTQREQGKN-AQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATIL 68
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E++V+HP AK++V KAQ +GDG + +GE+L+ AE L+ G+HP+ I +GY
Sbjct: 69 KEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYR 128
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFG-QEEILCPLIADACIQV 191
A+N+ ++++E+ E+ +++ +R A++ K G + L L+ A V
Sbjct: 129 LAVNEARKIIDEIAEKSTDDATLRKI------ALTALSGKNTGLSNDFLADLVVKAVNAV 182
Query: 192 CPKNPANFNVD--NVRVAKLLGGGLHNSTIVRGMVLKSDAVGS-----IKNMEKAKVAVF 244
VD N++V K GG ++++ + G+V+ + V S +KN AK+A+
Sbjct: 183 AEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKN---AKIALI 239
Query: 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMAL 304
++ TE + V I + +++++ E + +++ + +SGA V++ + ++A
Sbjct: 240 DSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQ 299
Query: 305 HFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTI 362
H+ + + ++ K ++ + + TGA V L P LG ++V +IG R+T
Sbjct: 300 HYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTF 359
Query: 363 VRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARR 422
V +VS +++RG TD ++ ++ERA++D + D + + G A E ELA R
Sbjct: 360 VMGCKNPKAVS-ILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMR 418
Query: 423 LKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDL 482
L +++ G +Q AI FA++ E++P+TLAENAG++ + + L AEH G+ VG+DL
Sbjct: 419 LAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEHEKGRISVGVDL 478
Query: 483 ENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGP 531
+N D+ V D K AL+ A + A +LR+D +I +K + P
Sbjct: 479 DNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKSTPP 527
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 297/530 (56%), Gaps = 17/530 (3%)
Query: 6 QPYGIQSM-LKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFV 64
+P GI + LKEG + G EA+ NI A + ++ I +T+ GP GM+KM+++ L + +
Sbjct: 10 EPVGIPVIILKEGTQRSYG-REALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITI 68
Query: 65 TNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHP 124
TN+ ATI+++++V HPAAK+LV K Q++E GDG T+ FAGE+L+ AE+L+ + +HP
Sbjct: 69 TNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHP 128
Query: 125 SEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPL 183
+ I+ GY +A+ K EV+E + E S + + E++ K ++ SK + + L
Sbjct: 129 TIIVEGYKEALRKASEVIESIAEPVSYD----DVEKLKLIAKTSLNSKAVAEARDYFAEL 184
Query: 184 IADACIQVCPKNPANFNVD--NVRVAKLLGGGLHNSTIVRGMVLKSDAVGS--IKNMEKA 239
+A V + + VD N+++ K GG L ++ +VRG+VL + V + +E A
Sbjct: 185 AVEAVRTVAERRGDRWYVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENA 244
Query: 240 KVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAV 299
++A+ ++ E + I + EQ++ + +E ++ I+ +A +GA V+++ +
Sbjct: 245 RIALLDTPLEIEKPEIDLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKGI 304
Query: 300 GEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGG 357
++A HF + ++ ++ + ++ + R TGA V + P+DLGY + V ++G
Sbjct: 305 DDVAQHFLAKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVGE 364
Query: 358 ARVTIVRNEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATE 416
++ + EG N S T++LRG + ++D+ ER++ D ++ D +IV G A E
Sbjct: 365 DKMVFI--EGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVE 422
Query: 417 IELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKT 476
E+A+ L E++ K G Q A+ FA + E +P+ LA NAG + +E++ L + H +
Sbjct: 423 AEVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPEN 482
Query: 477 K-VGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
K G+DL+ G D+ + V + K ALK A + A +LR+D +I A
Sbjct: 483 KWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIAA 532
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 292/528 (55%), Gaps = 15/528 (2%)
Query: 7 PYGIQSM-LKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVT 65
P GI + LKEG G EA+ NI A K + +T+ GP GM+KM+++ L + +T
Sbjct: 11 PEGIPVIILKEGSSRTYG-KEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITIT 69
Query: 66 NDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPS 125
ND ATI++++++QHPAAKLLV K Q EE DG + F+GE+++ AEEL+ +HP+
Sbjct: 70 NDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPT 129
Query: 126 EIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQF-GQEEILCPLI 184
I+SGY KA I+ +EE+ S + V +TE + +++SK G E L ++
Sbjct: 130 IIVSGYKKAEEMAIKTIEEI----STKVSVNDTEILRKVALTSLSSKAVAGAREHLADIV 185
Query: 185 ADACIQVCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAK 240
A QV + ++DNV++ K GG ++++ IV G+++ + V G K +E AK
Sbjct: 186 VKAITQVAELRGDKWYVDLDNVQIVKKHGGSINDTQIVYGIIVDKEVVHPGMPKRVENAK 245
Query: 241 VAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVG 300
+A+ ++ E + I++ Q++ + EE ++ + +A++GA V++ +
Sbjct: 246 IALLDASLEVEKPELDAEIRINDPTQMKKFLDEEENILKEKVDKIAQTGANVVICQKGID 305
Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGA 358
E+A H+ + ++ ++ + K +L + R TG V+ + + DLGY V +IG
Sbjct: 306 EVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTSQDLGYATLVEERKIGED 365
Query: 359 RVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 418
++ + +VS +++RG + ++D+ ERA+ D + T + RD R + G A E E
Sbjct: 366 KMVFIEGAKNPKAVS-ILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETE 424
Query: 419 LARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKV 478
+A+RL++++ + G +Q AI +A + E + L EN G + +E++ L + H + K
Sbjct: 425 IAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNKW 484
Query: 479 -GIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
GI++ G D+ ++ V + V K A+K A +A+ +LR+D +I A
Sbjct: 485 HGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISA 532
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/537 (31%), Positives = 296/537 (55%), Gaps = 24/537 (4%)
Query: 6 QPYGIQSM--LKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLF 63
Q G Q + L E + SG D A NI A K ++ RT+LGP GM+KM+++ ++
Sbjct: 3 QQMGNQPLIVLSEDSQRTSGED-AQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVV 61
Query: 64 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLH 123
VTND TI+ E++++HPAA ++V + Q+ E+GDG ++ +GE+L AE L+ +H
Sbjct: 62 VTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIH 121
Query: 124 PSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEE---IL 180
+ + GY +A K E+L++ +DV + AA A G E +L
Sbjct: 122 ATTLAQGYRQAAEKAKELLDDAA------IDVSADDTETLEKIAATAMTGKGAENAKGVL 175
Query: 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNM---- 236
L+ A V N + + NV+V K+ GG + NS ++ G+++ + V +NM
Sbjct: 176 SDLVVRAVQSVADDNDVDTD--NVKVEKVTGGAIENSELIEGVIVDKERVS--ENMPYAV 231
Query: 237 EKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSG 296
E A +A+ G++ TE V + + +QL+N+ EE +++ ++ A+ ++GA V+ +
Sbjct: 232 EDANIALVDDGLEVQETEIDTEVNVTDPDQLQNFLDQEEEQLKEMVDALKDAGANVVFAD 291
Query: 297 AAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEE 354
+ + +MA H+ + ++ ++ + + R R TGA V+ + DLG SV+ ++
Sbjct: 292 SGIDDMAQHYLAKEGILAVRRAKSDDFTRLSRATGATPVSNVNDIEAADLGAAGSVAQKD 351
Query: 355 IGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAA 414
IGG V + SV T++LRG T+ ++D++ERA++D + + D +++PG A
Sbjct: 352 IGGDERIFVEDVEEAKSV-TLILRGGTEHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGA 410
Query: 415 TEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASG 474
E ELA +L++F+ G +Q A+ FA++ E++P+TLAENAG + ++ + L ++H G
Sbjct: 411 PETELAMQLRDFADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQHDGG 470
Query: 475 KTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKP-AGG 530
T+ G+D NG D+ + + + K A++ A +AA +LR+D +I A AGG
Sbjct: 471 DTEAGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVIAAGDLAGG 527
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 279/504 (55%), Gaps = 15/504 (2%)
Query: 31 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90
NI A + ++ RT+LGP GM+KM+++ L + VTND TI+ E+ V+HPAAK+L+ K
Sbjct: 27 NILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAK 86
Query: 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGS 150
Q++E+GDG + AGE+L+ AEEL+ +HPS II+GY A NK +E L+ + +E
Sbjct: 87 TQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELKSIAKE-- 144
Query: 151 ENMDVRNTEEVIYRMKAAVASKQFGQE---EILCPLIADACIQVCPKNPANFNVDNVRVA 207
V+ + + + A + G E E L ++ +A V + + D ++V
Sbjct: 145 ----VKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAVVDEETGKVDKDLIKVE 200
Query: 208 KLLGGGLHNSTIVRGMVLKSDAVGS--IKNMEKAKVAVFAGGVDTSATETKGTVLIHNAE 265
K G + + ++RG+V+ + V K +E AK+A+ ++ TET + I +
Sbjct: 201 KKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDAEIRITDPA 260
Query: 266 QLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRR 325
+L + + EE ++ +++ +A +GA V+ + ++A H+ + ++ ++ K ++ +
Sbjct: 261 KLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILAVRRVKKSDMEK 320
Query: 326 FCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDS 383
+ TGA V + P+DLG V ++ G + V +V T++ RGST+
Sbjct: 321 LAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFVEQCKHPKAV-TILARGSTEH 379
Query: 384 ILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAE 443
+++++ RA+DD + K + +IV G ATEIELA+RL++F+ G +Q A+ FA+
Sbjct: 380 VVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAFAD 439
Query: 444 SFEMVPKTLAENAGLNAMEIISSLYAEH-ASGKTKVGIDLENGVCADISTMNVWDLYVTK 502
+ E++P+TLAEN+GL+ ++++ L A H G G+D+ G D+ V + K
Sbjct: 440 ALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVK 499
Query: 503 FFALKYAADAACTVLRVDQIIMAK 526
A+ A +A+ +LR+D +I A+
Sbjct: 500 TQAIDSATEASVMLLRIDDVIAAE 523
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 293/523 (56%), Gaps = 17/523 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LKEG + G D A NI A + ++ +++LGP GM+KM+++ L + +TND TI+
Sbjct: 11 ILKEGTQRTVGRD-AQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E++V+HPAAK+++ K Q E+GDG + AGE+L+ AEEL+ +HP+ I GY
Sbjct: 70 KEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYR 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEI--LCPLIADACIQ 190
A NK +E+LE + + ++DV + EE + ++ A + + + + L L+ +A +
Sbjct: 130 MAANKAVEILESI----AMDIDVED-EETLKKIAATAITGKHSEYALDHLSSLVVEAVKR 184
Query: 191 VCPKNPANFNV--DNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAG 246
V K + V DN+++ K GG + ++ +V G+V+ + V G K ++ AK+AV
Sbjct: 185 VAEKVDDRYKVDEDNIKLEKRQGGSVADTKLVNGIVIDKEVVHPGMPKRVKNAKIAVLKA 244
Query: 247 GVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHF 306
++ TET + I + +QL + + EE ++ ++ +AE+GA V+ + ++A ++
Sbjct: 245 ALEVKETETDAEIRITDPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFCQKGIDDLAQYY 304
Query: 307 CERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVR 364
+ ++ ++ + ++ + + GA + L + DLG + V ++G ++ +
Sbjct: 305 LAKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEKMVFI- 363
Query: 365 NEGGGNSVS-TVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRL 423
EG N + T+++RG ++ ++D++ER++ D + K ++V G A EIE+A ++
Sbjct: 364 -EGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKI 422
Query: 424 KEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLE 483
++++ G +Q A FA + E++P+ LAEN+GL+ ++I+ L H GKT G+D+
Sbjct: 423 RDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGKTTYGVDVF 482
Query: 484 NGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
+G A + V + K A+ A + A +LR+D +I AK
Sbjct: 483 SGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVIAAK 525
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 258 bits (660), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 293/528 (55%), Gaps = 15/528 (2%)
Query: 7 PYGIQSM-LKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVT 65
P GI + LKEG G EA+ NI A K + +++ GP GM+KM+++ L + +T
Sbjct: 11 PEGIPVIILKEGSSRTYG-KEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITIT 69
Query: 66 NDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPS 125
ND ATI++++++QHPAAKLLV K Q EE DG + AGE+++ AEEL+ +HP+
Sbjct: 70 NDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPT 129
Query: 126 EIISGYTKAINKTIEVLEELVEEGSEN-MDVRNTEEVIYRMKAAVASKQFGQEEILCPLI 184
I+SG+ KA + ++ +EE+ ++ S N MD+ + AVA G E L ++
Sbjct: 130 IIVSGFKKAEEQALKTIEEIAQKVSVNDMDILKKVAMTSLNSKAVA----GAREYLADIV 185
Query: 185 ADACIQVCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAK 240
A A QV + ++DN+++ K GG ++++ I+ G+V+ + V G K +E AK
Sbjct: 186 AKAVTQVAELRGDRWYVDLDNIQIVKKHGGSINDTQIIYGIVVDKEVVHPGMPKRVENAK 245
Query: 241 VAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVG 300
+A+ ++ E + I++ Q++ + + EE ++ + +A +GA V++ +
Sbjct: 246 IALLDASLEVEKPELDAEIRINDPTQMKKFLEEEENLLKEKVDKIAATGANVVICQKGID 305
Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTG--AVAMLCQPNPDDLGYVDSVSVEEIGGA 358
E+A H+ + ++ ++ + K +L + R TG V+ + + P DLGY V ++G
Sbjct: 306 EVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGYAALVEERKVGED 365
Query: 359 RVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 418
++ V +VS +++RG + ++D+ ERA+ D + T + RD R V G A E+E
Sbjct: 366 KMVFVEGAKNPKAVS-ILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELE 424
Query: 419 LARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTK- 477
+A+RL++++ + G +Q AI +A + E + L EN G + ++++ L + H + K
Sbjct: 425 IAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKW 484
Query: 478 VGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 525
GI++ G D+ + V + V K A+K A +AA +LR+D +I A
Sbjct: 485 YGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIAA 532
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 277/501 (55%), Gaps = 13/501 (2%)
Query: 26 EAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLL 85
+A+ NI A + +S + +T+ GP GM+KM+++ L + +TND ATI+++ E+QHPAAK+L
Sbjct: 7 DALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKML 66
Query: 86 VLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEEL 145
V K+Q E+GDG + AGE+L+ AEEL+ +HP+ IISGY A+ + +++L+++
Sbjct: 67 VQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQM 126
Query: 146 VEEGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKN-PANF-NVD 202
+E +D+ N E + + ++ SK E + A QV K N+ ++D
Sbjct: 127 ----AEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNYVDLD 182
Query: 203 NVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGGVDTSATETKGTVL 260
N+++ K GG L +S +V G+VL + V G + +E AK+ + ++ E +
Sbjct: 183 NIQIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEIDAEIR 242
Query: 261 IHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSK 320
I++ EQLE + + EE + ++ +A GA V+V + E+A HF + ++ ++ +
Sbjct: 243 INDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQHFLAKKGILAVRRVKR 302
Query: 321 FELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLR 378
+L + R TG V+ + P+DLGY V ++G ++ + SVS +V+R
Sbjct: 303 SDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVGEDKMVFIEGCKNPRSVS-IVIR 361
Query: 379 GSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAI 438
G + ++D+ ER++ D ++ RD +++PG A EIELA+ ++ + + G +Q AI
Sbjct: 362 GGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAI 421
Query: 439 AKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTK-VGIDLENGVCADISTMNVWD 497
FA++ E + TL ENAGL+ ++++ L A H K + IDL G ++ V +
Sbjct: 422 EAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHEREDGKYLSIDLATGDLVNMREKGVIE 481
Query: 498 LYVTKFFALKYAADAACTVLR 518
A+K +AA ++R
Sbjct: 482 PVSILANAIKAGTEAATIIMR 502
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 284/523 (54%), Gaps = 17/523 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L+EG + G D A NI A + ++ R++LGP GM+KM+++ L + +TND TI+
Sbjct: 11 ILREGTQRTVGRD-AQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTIL 69
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E++V+HPAAK+++ K Q E+GDG + AGE+L+ AEEL+ +HP+ I +GY
Sbjct: 70 KEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYR 129
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQE---EILCPLIADACI 189
A K +E+L E+ + + ++ I + A A G E + L + +A
Sbjct: 130 YAAEKALEILNEIA------IPISKDDDEILKKIATTAMTGKGAEVAIDKLAEIAVNAVK 183
Query: 190 QVCPKN--PANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFA 245
+ ++ N D +++ K GG + + +V G+VL + V G K +E AK+ +
Sbjct: 184 MIAEESNGQVEVNTDYIKIEKRQGGSIEETELVDGIVLDKEVVHPGMPKRVENAKILLLD 243
Query: 246 GGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALH 305
++ TE + I + E+L+ + + EEA ++ ++ + +GA V+ + ++A +
Sbjct: 244 SALEVKETEIDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKGIDDLAQY 303
Query: 306 FCERYKLMVLKISSKFELRRFCRTTGAVAM--LCQPNPDDLGYVDSVSVEEIGGARVTIV 363
+ + ++ ++ K ++ + + TGA + L + +DLG V ++G ++ V
Sbjct: 304 YLAKAGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVGDEKMVFV 363
Query: 364 RNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRL 423
+V T+++RG T+ +++++ R ++D V D ++V GA A EIE++ +L
Sbjct: 364 TGCKNPKAV-TILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKL 422
Query: 424 KEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLE 483
+E++ G +Q A+ FA + E++P+TLAENAGL+ ++++ L A H G+ G+D++
Sbjct: 423 REWAPSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQKYAGVDVD 482
Query: 484 NGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
G D+ V++ K A+ A + A +LR+D II AK
Sbjct: 483 TGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDIIAAK 525
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 255 bits (652), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 290/542 (53%), Gaps = 19/542 (3%)
Query: 7 PYGIQSM-LKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVT 65
P GI + LKEG G EA+ NI A K + +++ GP GM+KM ++ L + +T
Sbjct: 10 PEGIPVIILKEGSSRTYG-KEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITIT 68
Query: 66 NDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPS 125
ND ATI++++++QHP KLLV K Q EE DG + AGE+ + AE+L+ +HP+
Sbjct: 69 NDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPT 128
Query: 126 EIISGYTKAINKTIEVLEELVEEGSEN-MDVRNTEEVIYRMKAAVASKQFGQEEILCPLI 184
I+SGY KA ++ ++++ + S N DV + AVA G E L L+
Sbjct: 129 IIVSGYKKAEEIALKTIQDIAQPVSINDTDVLRKVALTSLGSKAVA----GAREYLADLV 184
Query: 185 ADACIQVCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAK 240
A QV + ++DNV++ K GG ++++ +V G+V+ + V G K +E AK
Sbjct: 185 VKAVAQVAELRGDKWYVDLDNVQIVKKHGGSINDTQLVYGIVVDKEVVHPGMPKRIENAK 244
Query: 241 VAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVG 300
+A+ ++ E + I++ Q+ + + EE ++ + +A +GA V++ +
Sbjct: 245 IALLDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGID 304
Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGA 358
E+A H+ + ++ ++ + K +L + R TG ++ + + DLGY V ++G
Sbjct: 305 EVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVGED 364
Query: 359 RVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 418
++ V SVS +++RG + ++D+ ERA+ D + T + RD R V G A EIE
Sbjct: 365 KMVFVEGAKNPKSVS-ILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIE 423
Query: 419 LARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTK- 477
+A+RL++++ + G +Q AI +A + E + LAENAGL+ ++ + L + H + K
Sbjct: 424 IAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKW 483
Query: 478 VGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQP 537
G++L G D+ + V + + K A+K A +A VLR+D I+ A GG +P
Sbjct: 484 YGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIVAAGKKGG----SEP 539
Query: 538 GG 539
GG
Sbjct: 540 GG 541
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 293/542 (54%), Gaps = 19/542 (3%)
Query: 7 PYGIQSM-LKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVT 65
P GI + LKEG G EA+ NI A K + +++ GP GM+KM+++ L + +T
Sbjct: 10 PEGIPVIILKEGSSRTYG-KEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITIT 68
Query: 66 NDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPS 125
ND ATI++++++QHP KLLV K Q EE DG + AGE+ + AE+L+ +HP+
Sbjct: 69 NDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPT 128
Query: 126 EIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQF-GQEEILCPLI 184
I+SGY KA ++ ++E+ ++ + + +T+ + ++ SK G E L L+
Sbjct: 129 IIVSGYKKAEEIALKTIQEI----AQPVTINDTDVLRKVALTSLGSKAVAGAREYLADLV 184
Query: 185 ADACIQVCPKNPANF--NVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAK 240
A QV + ++DNV++ K GG ++++ +V G+V+ + V G K +E AK
Sbjct: 185 VKAVAQVAELRGDKWYVDLDNVQIVKKHGGSVNDTQLVYGIVVDKEVVHPGMPKRIENAK 244
Query: 241 VAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVG 300
+A+ ++ E + I++ Q+ + + EE ++ + +A +GA V++ +
Sbjct: 245 IALLDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGID 304
Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGA 358
E+A H+ + ++ ++ + K +L + R TG ++ + + DLGY V ++G
Sbjct: 305 EVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVGED 364
Query: 359 RVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 418
++ V SVS +++RG + ++D+ ERA+ D + T + RD R V G A EIE
Sbjct: 365 KMVFVEGAKNPKSVS-ILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIE 423
Query: 419 LARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTK- 477
+A+RL++++ + G +Q AI +A + E + LAENAGL+ ++ + L + H + K
Sbjct: 424 IAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKW 483
Query: 478 VGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQP 537
G++L G D+ + V + + K A+K A +A VLR+D I+ A G + +P
Sbjct: 484 YGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIV----AAGKKSGSEP 539
Query: 538 GG 539
G
Sbjct: 540 SG 541
>sp|Q2T9X2|TCPD_BOVIN T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=1 SV=3
Length = 542
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 273/507 (53%), Gaps = 21/507 (4%)
Query: 31 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90
NI A K ++ RTSLGP GM+KM+ + + +TND ATI+ +++V HPAA++LV K
Sbjct: 40 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSK 99
Query: 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGS 150
AQ E GDG + AG +L +L++ G+HP+ I + KA+ K IE+L ++ S
Sbjct: 100 AQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM----S 155
Query: 151 ENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVC-PKNPANFNVDNVRVAK 208
++ + E ++ ++ SK Q +L P+ DA ++V P + ++ ++++ K
Sbjct: 156 RPEELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVK 215
Query: 209 LLGGGLHNSTIVRGMVLKSDAVGS-IKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQL 267
LGG + + +V G+VL S I +EKAK+ + + T+ +++ + Q+
Sbjct: 216 KLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQM 275
Query: 268 ENYAKTEEAKVEGLIKAVAESGAEVI-----VSGAAVGEMALHFCERYKLMVLKISSKFE 322
+ + E A + L+K + ++G V+ + A+ ++ALHF + K+MV+K + +
Sbjct: 276 DRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIERED 335
Query: 323 LRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIG----GARVTIVRNEGGGNSVSTVV 376
+ C+T G VA + Q D LG + EE+ G + I G +V T+V
Sbjct: 336 IEFICKTIGTKPVAHVDQFTADMLGSAELA--EEVSLNGSGKLIKITGCASPGKTV-TIV 392
Query: 377 LRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQY 436
+RGS ++++ ER++ D + + + + ++ G A EIELA RL E+S +G++ Y
Sbjct: 393 VRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESY 452
Query: 437 AIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVW 496
I FA++ E++P TLAENAGLN + ++ L HA G+ GI++ G ++I V
Sbjct: 453 CIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEQVV 512
Query: 497 DLYVTKFFALKYAADAACTVLRVDQII 523
+ AL A + ++L++D ++
Sbjct: 513 QPLLVSVSALTLATETVRSILKIDDVV 539
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 285/522 (54%), Gaps = 17/522 (3%)
Query: 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+L E K G D A NI A + + R++LGP GM+KM+++ L + VTND TI+
Sbjct: 9 VLPENVKRFMGRD-AQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTIL 67
Query: 73 NELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYT 132
E+ V+HPAAK+L+ K Q++E+GDG + AGE+L+ AEEL+ +HP+ +I GY
Sbjct: 68 KEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQ 127
Query: 133 KAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQE---EILCPLIADACI 189
A+ K EVL+E+ MDV+ ++ I A + G E E L +I +A
Sbjct: 128 LAVQKAQEVLKEIA------MDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVT 181
Query: 190 QVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGS--IKNMEKAKVAVFAGG 247
V ++ + D +++ K G + + ++ G+++ + V K +E AK+A+
Sbjct: 182 AVVDES-GKVDKDLIKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCP 240
Query: 248 VDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFC 307
++ TET + I + +L + + EE ++ ++ + SGA V+ + ++A H+
Sbjct: 241 IEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYL 300
Query: 308 ERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIGGARVTIVRN 365
+ ++ ++ K ++ + + TGA V + +DLG V +I G + V
Sbjct: 301 AKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAMIFVEE 360
Query: 366 EGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKE 425
+V T+++RG+T+ +++++ RAVDD + D +IV G A EIELA +L++
Sbjct: 361 CKHPKAV-TMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRD 419
Query: 426 FSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTK-VGIDLEN 484
++ +G +Q A+ FA++ E+VP+TLAENAGL+A+E++ L A+HA G G+++
Sbjct: 420 YAEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFT 479
Query: 485 GVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
G +++ V + K A++ A +A +LR+D +I A+
Sbjct: 480 GDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIAAE 521
>sp|P50999|TCPD_SCHPO T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct4 PE=2 SV=2
Length = 527
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 281/520 (54%), Gaps = 30/520 (5%)
Query: 26 EAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLL 85
E L NI A + ++ RTSLGP GM+KM+ ++ +TND ATI+ L V HPAAK+L
Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKML 78
Query: 86 VLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEEL 145
V AQ E GDG + AG +L AE+L++ G+HP+ I + +A T++ ++E
Sbjct: 79 VDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKE- 137
Query: 146 VEEGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVC-PKNPANFNVDN 203
+ +++ + E ++ ++ SK Q +L P+ DA ++V P+ N ++ +
Sbjct: 138 ---NALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKD 194
Query: 204 VRVAKLLGGGLHNSTIVRGMVLKSDAV---GSIKNMEKAKVAVFAGGVDTSATETKGTVL 260
+R+ K LGG + ++ ++ G+ L AV G +EKA +A+ + + + V+
Sbjct: 195 IRIVKKLGGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPKPDMENQVV 254
Query: 261 IHNAEQLENYAKTEEAKVEGLIKAVAESGAEVI-----VSGAAVGEMALHFCERYKLMVL 315
+++ Q++ K E + + K + ++GA VI + AV ++ALHF + K+MV+
Sbjct: 255 VNDYRQMDKILKEERQYLLNMCKKIKKAGANVILIQKSILRDAVNDLALHFLAKLKIMVI 314
Query: 316 KISSKFELRRFCRTTGAVAMLCQP-------NPDDLGYVDSVSVEEIGGARVTIVRNEGG 368
K + E+ C++TG C+P D LG+ D V EE + IV+ G
Sbjct: 315 KDIERDEVEFICKSTG-----CKPIADIESFAEDKLGHADLV--EETSSSGEKIVKFSGV 367
Query: 369 GNSVSTVVL--RGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEF 426
N+ TV + RG+ L++ ER++ D + + + + ++ G + EIE A+RL E
Sbjct: 368 KNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEH 427
Query: 427 SFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 486
+ + G + I F+E+ E++P TLAENAGLNA+++++ L + HA+G+ GI++ G+
Sbjct: 428 ARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTAGINVRKGI 487
Query: 487 CADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
+I NV + A++ AA+ ++++D I +A+
Sbjct: 488 VTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDITLAR 527
>sp|Q7TPB1|TCPD_RAT T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1
SV=3
Length = 539
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 273/509 (53%), Gaps = 21/509 (4%)
Query: 29 LKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLA 88
NI A K ++ RTSLGP GM+KM+ + + +TND ATI+ +++V HPAA++LV
Sbjct: 35 FSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVEL 94
Query: 89 GKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEE 148
KAQ E GDG + AG +L +L++ G+HP+ I + KA+ K +E+L ++
Sbjct: 95 SKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDM--- 151
Query: 149 GSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVC-PKNPANFNVDNVRV 206
S + + + E ++ ++ SK Q +L P+ +A ++V P + ++ ++++
Sbjct: 152 -SRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKI 210
Query: 207 AKLLGGGLHNSTIVRGMVLKSDAVGS-IKNMEKAKVAVFAGGVDTSATETKGTVLIHNAE 265
K LGG + + +V G+VL S I +EKAK+ + + T+ +++ +
Sbjct: 211 VKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYA 270
Query: 266 QLENYAKTEEAKVEGLIKAVAESGAEVI-----VSGAAVGEMALHFCERYKLMVLKISSK 320
Q++ + E A + L+K + ++G V+ + A+ ++ALHF + K+MV+K +
Sbjct: 271 QMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIER 330
Query: 321 FELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIG----GARVTIVRNEGGGNSVST 374
++ C+T G VA + Q PD LG + EE+ G I G +V T
Sbjct: 331 EDIEFICKTIGTKPVAHIDQFTPDMLGSAELA--EEVSLNGSGKLFKITGCTSPGKTV-T 387
Query: 375 VVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLD 434
+V+RGS ++++ ER++ D + + + + ++ G A EIELA RL E+S +G++
Sbjct: 388 IVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGME 447
Query: 435 QYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMN 494
Y + FA++ E++P TLAENAGLN + ++ L HA G+ GI++ G ++I
Sbjct: 448 SYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEM 507
Query: 495 VWDLYVTKFFALKYAADAACTVLRVDQII 523
V + AL A + ++L++D ++
Sbjct: 508 VVQPLLVSVSALTLATETVRSILKIDDVV 536
>sp|P50991|TCPD_HUMAN T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4
Length = 539
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 274/507 (54%), Gaps = 21/507 (4%)
Query: 31 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90
NI A K ++ RTSLGP GM+KM+ + + +TND ATI+ +++V HPAA++LV K
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSK 96
Query: 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGS 150
AQ E GDG + AG +L +L++ G+HP+ I + KA+ K IE+L ++ S
Sbjct: 97 AQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM----S 152
Query: 151 ENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVC-PKNPANFNVDNVRVAK 208
+++ + E ++ ++ SK Q +L P+ +A ++V P + ++ ++++ K
Sbjct: 153 RPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVK 212
Query: 209 LLGGGLHNSTIVRGMVLKSDAVGS-IKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQL 267
LGG + + +V G+VL S I +EKAK+ + + T+ +++ + Q+
Sbjct: 213 KLGGTIDDCELVEGLVLTQKVSNSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQM 272
Query: 268 ENYAKTEEAKVEGLIKAVAESGAEVI-----VSGAAVGEMALHFCERYKLMVLKISSKFE 322
+ + E A + L+K + ++G V+ + A+ ++ALHF + K+MV+K + +
Sbjct: 273 DRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIERED 332
Query: 323 LRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEI----GGARVTIVRNEGGGNSVSTVV 376
+ C+T G VA + Q D LG + EE+ G + I G +V T+V
Sbjct: 333 IEFICKTIGTKPVAHIDQFTADMLGSAELA--EEVNLNGSGKLLKITGCASPGKTV-TIV 389
Query: 377 LRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQY 436
+RGS ++++ ER++ D + + + + ++ G A EIELA RL E+S +G++ Y
Sbjct: 390 VRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESY 449
Query: 437 AIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVW 496
+ FA++ E++P TLAENAGLN + ++ L HA G+ GI++ G ++I V
Sbjct: 450 CVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEELVV 509
Query: 497 DLYVTKFFALKYAADAACTVLRVDQII 523
+ AL A + ++L++D ++
Sbjct: 510 QPLLVSVSALTLATETVRSILKIDDVV 536
>sp|P80315|TCPD_MOUSE T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3
Length = 539
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 272/507 (53%), Gaps = 21/507 (4%)
Query: 31 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90
NI A K ++ RTSLGP GM+KM+ + + +TND ATI+ +++V HPAA++LV K
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSK 96
Query: 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGS 150
AQ E GDG + AG +L +L++ G+HP+ I + KA+ K +E+L ++ S
Sbjct: 97 AQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDM----S 152
Query: 151 ENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVC-PKNPANFNVDNVRVAK 208
+ + + E ++ ++ SK Q +L P+ +A ++V P + ++ ++++ K
Sbjct: 153 RPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVK 212
Query: 209 LLGGGLHNSTIVRGMVLKSDAVGS-IKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQL 267
LGG + + +V G+VL S I +EKAK+ + + T+ +++ + Q+
Sbjct: 213 KLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQM 272
Query: 268 ENYAKTEEAKVEGLIKAVAESGAEVI-----VSGAAVGEMALHFCERYKLMVLKISSKFE 322
+ + E A + L+K + ++G V+ + A+ ++ALHF + K+MV+K + +
Sbjct: 273 DRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDVERED 332
Query: 323 LRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEIG----GARVTIVRNEGGGNSVSTVV 376
+ C+T G VA + Q D LG + EE+ G I G +V T+V
Sbjct: 333 IEFICKTIGTKPVAHIDQFTADMLGSAELA--EEVSLNGSGKLFKITGCTSPGKTV-TIV 389
Query: 377 LRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQY 436
+RGS ++++ ER++ D + + + + ++ G A EIELA RL E+S +G++ Y
Sbjct: 390 VRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESY 449
Query: 437 AIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVW 496
+ FA++ E++P TLAENAGLN + ++ L HA G+ GI++ G ++I V
Sbjct: 450 CVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEMVV 509
Query: 497 DLYVTKFFALKYAADAACTVLRVDQII 523
+ AL A + ++L++D ++
Sbjct: 510 QPLLVSVSALTLATETVRSILKIDDVV 536
>sp|Q5R637|TCPD_PONAB T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3
Length = 539
Score = 245 bits (626), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 274/507 (54%), Gaps = 21/507 (4%)
Query: 31 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90
NI A K ++ RTSLGP GM+KM+ + + +TND ATI+ +++V HPAA++LV K
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSK 96
Query: 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGS 150
AQ E GDG + AG +L +L++ G+HP+ I + KA+ K IE+L ++ S
Sbjct: 97 AQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM----S 152
Query: 151 ENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVC-PKNPANFNVDNVRVAK 208
+++ + E ++ ++ SK Q +L P+ +A ++V P + ++ ++++ K
Sbjct: 153 RPVELSDRETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVK 212
Query: 209 LLGGGLHNSTIVRGMVLKSDAVGS-IKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQL 267
LGG + + +V G+VL S I +EKAK+ + + T+ +++ + Q+
Sbjct: 213 KLGGTIDDCELVEGLVLTQKVSNSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQM 272
Query: 268 ENYAKTEEAKVEGLIKAVAESGAEVI-----VSGAAVGEMALHFCERYKLMVLKISSKFE 322
+ + E A + L+K + ++G V+ + A+ ++ALHF + K+MV+K + +
Sbjct: 273 DRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIERED 332
Query: 323 LRRFCRTTGA--VAMLCQPNPDDLGYVDSVSVEEI----GGARVTIVRNEGGGNSVSTVV 376
+ C+T G VA + Q D LG + EE+ G + I G +V T+V
Sbjct: 333 IEFICKTIGTKPVAHIDQFTADMLGSAELA--EEVNLNGSGKLLKITGCASPGKTV-TIV 389
Query: 377 LRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQY 436
+RGS ++++ ER++ D + + + + ++ G A EIELA RL E+S +G++ Y
Sbjct: 390 VRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESY 449
Query: 437 AIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVW 496
+ FA++ E++P TLAENAGLN + ++ L HA G+ GI++ G ++I V
Sbjct: 450 CVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEELVV 509
Query: 497 DLYVTKFFALKYAADAACTVLRVDQII 523
+ AL A + ++L++D ++
Sbjct: 510 QPLLVSVSALTLATETVRSILKIDDVV 536
>sp|P53451|TCPD_TAKRU T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2
SV=1
Length = 536
Score = 245 bits (625), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 150/509 (29%), Positives = 275/509 (54%), Gaps = 19/509 (3%)
Query: 31 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90
NI A K ++ RTSLGP GM+KM+ + + +TND ATI+ +++V HP+AK+LV K
Sbjct: 34 NISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSK 93
Query: 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGS 150
AQ E GDG + AG +L L++ G+HP+ I + KA++K +EVL + S
Sbjct: 94 AQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAM----S 149
Query: 151 ENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVC-PKNPANFNVDNVRVAK 208
+ + + + E ++ ++ SK Q +L P+ DA ++V P + ++ ++++ K
Sbjct: 150 QPVQLGDRETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRVIDPATATSVDLHDIKIIK 209
Query: 209 LLGGGLHNSTIVRGMVLKSD-AVGSIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQL 267
LGG + + +V G+VL A S+ +EKAK+ + + T+ +++ + Q+
Sbjct: 210 KLGGTIDDCELVEGLVLTQRVANSSVSRVEKAKIGLIQFCLSPPKTDMDNQIVVSDYTQM 269
Query: 268 ENYAKTEEAKVEGLIKAVAESGAEVI-----VSGAAVGEMALHFCERYKLMVLKISSKFE 322
+ + E A + ++K + ++G V+ + A+ ++ALHF + K+MV+K + +
Sbjct: 270 DRVLREERAYILNMVKQIKKAGCNVLFIQKSILRDALSDLALHFLNKMKIMVVKDIERED 329
Query: 323 LRRFCRTTGA--VAMLCQPNPDDLG---YVDSVSVEEIGGARVTIVRNEGGGNSVSTVVL 377
+ C+T G +A + P+ LG + VS++ G V I G +VS +V+
Sbjct: 330 IEFICKTIGTKPIAHIDHFTPEMLGTAELAEEVSLDG-SGKLVKITGCASPGKTVS-IVV 387
Query: 378 RGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYA 437
RGS ++++ ER++ D + + + + ++ G A EIELA RL E+S G++ Y
Sbjct: 388 RGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYC 447
Query: 438 IAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWD 497
+ ++++ E++P TLAENAGLN + ++ L HA G GI++ G ++I V
Sbjct: 448 VRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDKMAGINVRKGGISNIMEELVVQ 507
Query: 498 LYVTKFFALKYAADAACTVLRVDQIIMAK 526
+ AL A + ++L++D ++ A+
Sbjct: 508 PLLVSISALTLATETVRSILKIDDVVNAR 536
>sp|Q6C100|TCPD_YARLI T-complex protein 1 subunit delta OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=CCT4 PE=3 SV=1
Length = 527
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 277/534 (51%), Gaps = 24/534 (4%)
Query: 7 PYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTN 66
P G +S K K + E NI A + ++ RTSLGP GM+KM+ ++ ++N
Sbjct: 4 PTGTKSGFKNKEKPL----EVRKSNILAARAVADAIRTSLGPKGMDKMIQTARGQVIISN 59
Query: 67 DAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSE 126
D TI+ + V HPAAK+LV +Q GDG + AG +L A++L++ G+HPS
Sbjct: 60 DGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSI 119
Query: 127 IISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIA 185
I + KA + EV+ ++ S+ +D+ + E +I ++ SK Q L P++
Sbjct: 120 IAENFQKAAQRAAEVVMDM----SKPIDLSDRETLIRAASTSLNSKIVSQFSSTLAPMLV 175
Query: 186 DACIQVCPKNPA---NFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV---GSIKNMEKA 239
DA +Q K P +++++R+ K LGG + ++T+ G+VL + AV G MEKA
Sbjct: 176 DAALQAAKKTPEGGLTLDLNDIRIIKSLGGTIEDTTLANGLVLNNYAVKNAGGPSRMEKA 235
Query: 240 KVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVI-----V 294
K+ + + + + +++++ Q++ K E + GL KA+ +S V+ +
Sbjct: 236 KIGLIQFQLSAPKPDMENHIVVNDYRQMDKILKEERQYILGLAKAIKKSKCNVLLIQKSI 295
Query: 295 SGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA--VAMLCQPNPDDLGYVDSVSV 352
AV E+ALHF + +MV+K + ++ R+TGA VA + D LG D V
Sbjct: 296 LRDAVSELALHFLAKLNIMVIKDIERDDIEFISRSTGAKPVADIEAFTEDKLGSCDLVEE 355
Query: 353 EEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGA 412
E G++ + G N+VS +++RG+ D ++D+ ER++ D + +++ R +VPG
Sbjct: 356 VESSGSKTVRFSSREGSNTVS-ILVRGANDLVIDETERSLHDALCVLRSLFRVPALVPGG 414
Query: 413 AATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHA 472
A E+++A+ + + S G +F+ + ++P TLAENAGLN + +++ L H
Sbjct: 415 GACEVQVAQVIGKESRAMDGASAICYEEFSNAMLVIPTTLAENAGLNPVNVVTELRVRHE 474
Query: 473 SGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 526
G+ GI + G + + VT A+ AA+ A +LR+D I ++
Sbjct: 475 KGEVNAGISVRRGTSIMVEEHVIQPALVTT-SAITLAAECAKGLLRIDDIAFSR 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,500,698
Number of Sequences: 539616
Number of extensions: 7735769
Number of successful extensions: 29432
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 837
Number of HSP's that attempted gapping in prelim test: 27308
Number of HSP's gapped (non-prelim): 1798
length of query: 544
length of database: 191,569,459
effective HSP length: 122
effective length of query: 422
effective length of database: 125,736,307
effective search space: 53060721554
effective search space used: 53060721554
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)