Query         009087
Match_columns 544
No_of_seqs    253 out of 2624
Neff          10.6
Searched_HMMs 46136
Date          Thu Mar 28 20:15:34 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009087.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009087hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02936 epsilon-ring hydroxyl 100.0 1.4E-79 2.9E-84  627.2  50.1  486   50-539     1-487 (489)
  2 KOG0156 Cytochrome P450 CYP2 s 100.0 8.1E-77 1.8E-81  589.5  42.9  447   64-534    25-488 (489)
  3 PLN02738 carotene beta-ring hy 100.0 8.3E-76 1.8E-80  607.2  49.2  482   52-536   101-597 (633)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 1.7E-75 3.8E-80  570.4  42.3  446   66-534    32-499 (499)
  5 PLN02971 tryptophan N-hydroxyl 100.0 4.8E-72 1.1E-76  577.9  42.9  457   65-536    57-536 (543)
  6 PLN02290 cytokinin trans-hydro 100.0 3.9E-71 8.5E-76  570.8  47.3  441   67-534    44-515 (516)
  7 KOG0157 Cytochrome P450 CYP4/C 100.0 4.1E-71 8.8E-76  560.9  43.6  455   65-534    35-496 (497)
  8 PLN02169 fatty acid (omega-1)- 100.0 1.1E-70 2.4E-75  561.4  46.8  449   66-533    32-499 (500)
  9 PTZ00404 cytochrome P450; Prov 100.0 1.8E-71 3.9E-76  568.9  37.3  446   59-533    23-482 (482)
 10 PLN00110 flavonoid 3',5'-hydro 100.0 1.6E-70 3.4E-75  561.5  42.9  468   52-540    17-503 (504)
 11 PLN03234 cytochrome P450 83B1; 100.0   1E-70 2.2E-75  565.8  41.5  462   52-533    13-498 (499)
 12 PLN02394 trans-cinnamate 4-mon 100.0 3.8E-70 8.2E-75  562.1  44.7  452   66-534    31-502 (503)
 13 PLN03195 fatty acid omega-hydr 100.0 6.7E-70 1.4E-74  561.1  46.1  452   66-534    31-516 (516)
 14 PLN00168 Cytochrome P450; Prov 100.0 1.1E-69 2.4E-74  558.9  45.3  460   63-535    33-518 (519)
 15 PLN02655 ent-kaurene oxidase   100.0 1.5E-69 3.2E-74  551.0  44.9  446   67-535     1-465 (466)
 16 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-69 2.9E-74  516.0  40.2  450   67-534    52-518 (519)
 17 PLN02687 flavonoid 3'-monooxyg 100.0 3.2E-69   7E-74  555.2  43.8  447   66-534    35-509 (517)
 18 PLN02500 cytochrome P450 90B1  100.0 1.2E-69 2.5E-74  555.7  39.7  436   65-532    38-488 (490)
 19 PLN02966 cytochrome P450 83A1  100.0 4.1E-69 8.8E-74  552.9  39.5  449   62-534    26-498 (502)
 20 PF00067 p450:  Cytochrome P450 100.0 1.1E-69 2.3E-74  556.8  34.7  445   67-530     1-463 (463)
 21 PLN02183 ferulate 5-hydroxylas 100.0 6.4E-69 1.4E-73  552.8  40.2  449   65-534    36-512 (516)
 22 PLN03112 cytochrome P450 famil 100.0 3.5E-68 7.6E-73  548.5  42.2  464   55-536    22-510 (514)
 23 PLN03018 homomethionine N-hydr 100.0 1.5E-67 3.3E-72  540.1  45.0  457   66-534    41-524 (534)
 24 PLN02196 abscisic acid 8'-hydr 100.0 8.1E-68 1.7E-72  537.3  38.4  422   66-533    36-462 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 4.4E-67 9.6E-72  531.1  38.9  434   64-534     6-450 (452)
 26 PLN02426 cytochrome P450, fami 100.0 1.2E-65 2.5E-70  523.6  46.4  445   67-535    43-501 (502)
 27 PLN02774 brassinosteroid-6-oxi 100.0 1.2E-66 2.6E-71  529.2  37.7  422   66-532    32-462 (463)
 28 PLN02987 Cytochrome P450, fami 100.0 3.5E-66 7.7E-71  523.3  39.3  431   65-534    30-469 (472)
 29 PLN02302 ent-kaurenoic acid ox 100.0 4.1E-65 8.9E-70  524.5  41.6  431   65-535    42-489 (490)
 30 KOG0684 Cytochrome P450 [Secon 100.0 7.3E-58 1.6E-62  424.6  31.6  438   67-534    33-485 (486)
 31 PLN02648 allene oxide synthase 100.0 3.8E-57 8.2E-62  453.8  32.1  406   63-510    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.1E-52 4.5E-57  414.9  31.9  376   91-533    24-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  66.1      16 0.00036   23.6   4.2   43  329-371     5-47  (48)
 34 PF12508 DUF3714:  Protein of u  57.3     3.6 7.8E-05   36.1   0.1   44  387-432    51-94  (200)
 35 PF05952 ComX:  Bacillus compet  49.9      15 0.00034   24.7   2.1   18  352-369     4-21  (57)
 36 KOG0114 Predicted RNA-binding   36.8      67  0.0014   24.7   3.9   39   92-130    32-76  (124)
 37 PF08776 VASP_tetra:  VASP tetr  31.8      55  0.0012   20.1   2.3   28  361-400    10-37  (40)
 38 PF13893 RRM_5:  RNA recognitio  30.8      95  0.0021   20.4   3.8   36   95-130     1-40  (56)
 39 TIGR03779 Bac_Flav_CT_M Bacter  28.6      21 0.00046   35.2   0.3   57  387-445   254-321 (410)
 40 PF09201 SRX:  SRX;  InterPro:   28.4      52  0.0011   26.7   2.4   22  480-501    19-40  (148)
 41 KOG3506 40S ribosomal protein   27.1      29 0.00063   22.9   0.6   11  472-482    12-22  (56)
 42 PF13625 Helicase_C_3:  Helicas  26.1 1.4E+02  0.0031   24.1   4.7   40   90-131    75-114 (129)
 43 COG2101 SPT15 TATA-box binding  22.9      26 0.00056   29.7  -0.2   36  448-485    35-70  (185)
 44 PRK10597 DNA damage-inducible   22.8   2E+02  0.0044   21.1   4.3   38   92-129    23-68  (81)
 45 PF14129 DUF4296:  Domain of un  21.8 3.4E+02  0.0074   20.1   6.6   49  327-375    30-78  (87)
 46 PF10264 Stork_head:  Winged he  20.4 2.9E+02  0.0064   20.2   4.7   40  347-386    13-55  (80)
 47 PF08492 SRP72:  SRP72 RNA-bind  20.1      66  0.0014   21.9   1.3    7  451-457    44-50  (59)

No 1  
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.4e-79  Score=627.20  Aligned_cols=486  Identities=83%  Similarity=1.300  Sum_probs=409.0

Q ss_pred             ccchhhhHHhhhhhcccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHh
Q 009087           50 WVSPDWLTSLTKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLR  129 (544)
Q Consensus        50 ~~~~~~~~~l~~~~~~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~  129 (544)
                      |+.+.|++.|.++||    |.+|||++|+.++++..+.++.++..+.+|+++|||||++++|+.+.++++||+++++|++
T Consensus         1 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~   76 (489)
T PLN02936          1 WVSPDWLTSLNRLWG----DDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLR   76 (489)
T ss_pred             CCCchHHHhhhccCC----CCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHH
Confidence            678999999999999    8999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hcCCCCCCchhhHHhhhhhCCcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHH
Q 009087          130 NYGTKYAKGLVSEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEE  209 (544)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~  209 (544)
                      +.+..|.++........++|.+++..+|+.|+++|+++++.|+..++..+.+.++.++++.+++.+.+...+++++|+.+
T Consensus        77 ~~~~~f~~~~~~~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~  156 (489)
T PLN02936         77 NYGSKYAKGLVAEVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEA  156 (489)
T ss_pred             hccccccCcchhhhhHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHH
Confidence            76667877655444444567888889999999999999999999899888756888999999999988665677899999


Q ss_pred             HHHHHHHHHHHHhhccccCCCCCCCChHHHHHHHHHHHHHHhccCchhhhH-HHHhhhchhhHHHHHHHHHHHHHHHHHH
Q 009087          210 KFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWK-AALCKIVPRQIKAEKAVTVIRKTVEELI  288 (544)
Q Consensus       210 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~~~~p~~~~~~~~~~~~~~~~~~~i  288 (544)
                      ++..+++|+++.++||.+++..+.+.++...+...+.........++|+|. +++..+.|..++..++.+.+.+++.+.+
T Consensus       157 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i  236 (489)
T PLN02936        157 KFSQLTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLV  236 (489)
T ss_pred             HHHHHHHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999987655555666665554443333334555443 2233344555566778888899999999


Q ss_pred             HHHHHHhhhhccccccccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHH
Q 009087          289 IKCKEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQ  368 (544)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr  368 (544)
                      +++++..++..+.....+..+....++++.|+...++++.+++.++++++++||+|||+++|+|++++|++||++|+|+|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~  316 (489)
T PLN02936        237 DKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQ  316 (489)
T ss_pred             HHHHHHHhhcccccccccccccCchHHHHHHHhccccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            88776544322111111111233568999999877789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCC
Q 009087          369 EEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAE  448 (544)
Q Consensus       369 ~Ei~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~  448 (544)
                      +||+++++++.++++++++||||+|||+||||++|+++...+|++.+|++++||.||+|+.|+++.+++||||++|+||+
T Consensus       317 ~Ei~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  396 (489)
T PLN02936        317 EELDRVLQGRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAE  396 (489)
T ss_pred             HHHHHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCcc
Confidence            99999998777899999999999999999999999999999999888888899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeE
Q 009087          449 EFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYM  528 (544)
Q Consensus       449 ~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v  528 (544)
                      +|+||||+.++...........++|||.|+|.|+|++||++|+++++++|+++|+|++++++++....+.+..+++++.|
T Consensus       397 ~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v  476 (489)
T PLN02936        397 EFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLYM  476 (489)
T ss_pred             ccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeEE
Confidence            99999998543211112234579999999999999999999999999999999999999877766556677889999999


Q ss_pred             EEEEecCCCcc
Q 009087          529 KLRQRQHLNSF  539 (544)
Q Consensus       529 ~~~~r~~~~~~  539 (544)
                      ++++|....|-
T Consensus       477 ~~~~R~~~~~~  487 (489)
T PLN02936        477 TVSRRRVPDGD  487 (489)
T ss_pred             EEEeeeCCCCC
Confidence            99999876553


No 2  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.1e-77  Score=589.55  Aligned_cols=447  Identities=26%  Similarity=0.393  Sum_probs=364.7

Q ss_pred             cccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchh-hH
Q 009087           64 TITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV-SE  142 (544)
Q Consensus        64 ~~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~-~~  142 (544)
                      .++||||.++|++||    +..+....+|..+.+|.++|||||.+++|+.++|||+|+++++|++++++..|+.++. ..
T Consensus        25 ~~lPPGP~~lPiIGn----l~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGN----LHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             CCCCcCCCCCCcccc----HHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            567999999999999    6665545699999999999999999999999999999999999999999989998875 22


Q ss_pred             Hhhhh--hCCccccc-CCccHHhhhcccCcc-CcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHH
Q 009087          143 VSEFL--FGSGFAIA-EGPLWMGRRRAVAPS-LHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDV  218 (544)
Q Consensus       143 ~~~~~--~g~~l~~~-~g~~w~~~R~~~~~~-f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dv  218 (544)
                      ....+  .+.++..+ +|+.|+.+||+.... ++...++... ..-.++++.+++.+.+ ...+++||+...+..++.++
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~-~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM-EIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH-HHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHH
Confidence            22333  34778888 899999999987655 4666666666 5558889999999987 33338999999999999999


Q ss_pred             HHHhhccccCCCCCCCChHHHHHHHHHHHHHH-----hccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009087          219 IGLSVFNYNFDSLTADSPVIDAVYTALKEAEL-----RSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKE  293 (544)
Q Consensus       219 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~  293 (544)
                      |++++||.+++..  +++....+.........     ...+++|.|..++....+..++.......+..++++.|+++++
T Consensus       179 I~~~~fG~rf~~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~  256 (489)
T KOG0156|consen  179 ICRMLFGRRFEEE--DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHRE  256 (489)
T ss_pred             HHHHHhCCccccC--CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999864  22333334444444332     2234455211222222234455555555689999999999887


Q ss_pred             HhhhhccccccccccCCCChhHHHHHHhccc----C-CChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHH
Q 009087          294 IVETEGERIDDEEYVNDSDPSILRFLLASRE----E-VSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQ  368 (544)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~----~-l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr  368 (544)
                      .. ...          +. .|+++.+++..+    + +++++|...++++++||+|||++|+.|++.+|++||++|+|+|
T Consensus       257 ~~-~~~----------~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~q  324 (489)
T KOG0156|consen  257 KI-GDE----------EG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQ  324 (489)
T ss_pred             hh-ccC----------CC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence            65 110          11 678888887633    2 8999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCC-CChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCC
Q 009087          369 EEIDRVLQGRS-PSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERA  447 (544)
Q Consensus       369 ~Ei~~~~~~~~-~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp  447 (544)
                      +||++++|.+. ++.+|+.+||||+|||+|++|++|++|..++|.+.+|+.++||.|||||.|+++.|++||||++|+||
T Consensus       325 eEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP  404 (489)
T KOG0156|consen  325 EEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDP  404 (489)
T ss_pred             HHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCc
Confidence            99999999765 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCccccc-ceeEecCCCe
Q 009087          448 EEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTT-GATIHTTNGL  526 (544)
Q Consensus       448 ~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~-~~~~~~~~~~  526 (544)
                      ++|+||||++++   +.......++|||.|+|.|||..+|++|+.+++|.||++|+|++.++ ++++.. +.+...+.++
T Consensus       405 ~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~~~~~~~~~pl  480 (489)
T KOG0156|consen  405 EEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEAGLTLKKKKPL  480 (489)
T ss_pred             cccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCcccccceecCCcc
Confidence            999999999753   11126678999999999999999999999999999999999999977 544432 3666777788


Q ss_pred             eEEEEEec
Q 009087          527 YMKLRQRQ  534 (544)
Q Consensus       527 ~v~~~~r~  534 (544)
                      .+...+|.
T Consensus       481 ~~~~~~r~  488 (489)
T KOG0156|consen  481 KAVPVPRL  488 (489)
T ss_pred             eeeeecCC
Confidence            88777764


No 3  
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=8.3e-76  Score=607.24  Aligned_cols=482  Identities=48%  Similarity=0.880  Sum_probs=384.3

Q ss_pred             chhhhHHhhhhhccc-CCCCC------------CCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEE
Q 009087           52 SPDWLTSLTKSLTIT-QSDES------------NIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVV  118 (544)
Q Consensus        52 ~~~~~~~l~~~~~~~-~pgp~------------~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv  118 (544)
                      ...|...+++.|.+. .|||.            +.|-++...+.+..+.+|+++..+.+||++|||||++++|+.++++|
T Consensus       101 ~~~~~~~~~~~~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvI  180 (633)
T PLN02738        101 KPGFPATLRNGLAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIV  180 (633)
T ss_pred             CCCchHHHHhhhhhCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEE
Confidence            345777777777652 34543            23333334444556667889999999999999999999999889999


Q ss_pred             cChHHHHHHHhhcCCCCCCchhhHHhhhhhCCcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009087          119 SDPAIAKHVLRNYGTKYAKGLVSEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTD  198 (544)
Q Consensus       119 ~dp~~i~~il~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~  198 (544)
                      +||+.+++||.+.+..|.++..........+.+++..+|+.|+.+|+++++.|+..++..+. +.+.++++.++++|.+.
T Consensus       181 sDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~l~-~~i~~~v~~L~~~L~~~  259 (633)
T PLN02738        181 SDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMI-SLFGQASDRLCQKLDAA  259 (633)
T ss_pred             CCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhccHhhhHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence            99999999998766667776544444445677888889999999999999999999999988 89999999999999886


Q ss_pred             hcCCceeeHHHHHHHHHHHHHHHhhccccCCCCCCCChHHHHHHHHHHHHHHhccCchhhh-HHHHhhhchhhHHHHHHH
Q 009087          199 ALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYW-KAALCKIVPRQIKAEKAV  277 (544)
Q Consensus       199 ~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~l~~~~p~~~~~~~~~  277 (544)
                      ..+++++|+...+..+++|+|+.++||.+++.+..++++...+...+..........++.| .+++..+.+..++..+..
T Consensus       260 ~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~  339 (633)
T PLN02738        260 ASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEAL  339 (633)
T ss_pred             hcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHH
Confidence            6678899999999999999999999999998765555666666655544332222333333 233333333334455566


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhccccccccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 009087          278 TVIRKTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLL  357 (544)
Q Consensus       278 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L  357 (544)
                      +.+..+++++++.+++..++...... ....+..+.++++.|++..++++++++.++++.+++||+|||+++|+|++++|
T Consensus       340 ~~l~~~~~~li~~~~~~~~~~~~~~~-~~~~~~~~~dil~~Ll~~~~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L  418 (633)
T PLN02738        340 KLINDTLDDLIAICKRMVEEEELQFH-EEYMNERDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL  418 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcccch-hcccccccchHHHHHHHcCCCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence            67777777777766554433211111 11112344689999998777799999999999999999999999999999999


Q ss_pred             hhChHHHHHHHHHHHHHhCCCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccc
Q 009087          358 SKDCNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNI  437 (544)
Q Consensus       358 ~~~P~~~~klr~Ei~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~  437 (544)
                      ++||++|+|||+||+++++++.++++++++||||+|||+|+|||+|+++.+.|++ .+|.+++||.||+||.|+++.+.+
T Consensus       419 ~~~Pevq~kLreEl~~v~~~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a-~~d~~i~gy~IPkGT~V~~s~~~i  497 (633)
T PLN02738        419 SKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRS-LENDMLGGYPIKRGEDIFISVWNL  497 (633)
T ss_pred             HhCHHHHHHHHHHHHHhcCCCCCCHHHHccCHHHHHHHHHHHhcCCCccccceee-ccCceECCEEECCCCEEEecHHHH
Confidence            9999999999999999998777899999999999999999999999999877665 666778999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC-Cccccc
Q 009087          438 HHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-NINMTT  516 (544)
Q Consensus       438 ~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~  516 (544)
                      ||||++|+||++|+||||+.++...+.......++|||.|+|.|+|++||++|+++++|.|+++|+|++.++. ++.+..
T Consensus       498 hrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~  577 (633)
T PLN02738        498 HRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTT  577 (633)
T ss_pred             hCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCccccc
Confidence            9999999999999999998432221223355689999999999999999999999999999999999998664 355556


Q ss_pred             ceeEecCCCeeEEEEEecCC
Q 009087          517 GATIHTTNGLYMKLRQRQHL  536 (544)
Q Consensus       517 ~~~~~~~~~~~v~~~~r~~~  536 (544)
                      +.++.+++++.|++++|...
T Consensus       578 ~~~~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        578 GATIHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             ceEEeeCCCcEEEEEECCCC
Confidence            77888999999999999653


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-75  Score=570.44  Aligned_cols=446  Identities=26%  Similarity=0.433  Sum_probs=350.3

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhcc-chHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCC--chhhH
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGA-LFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAK--GLVSE  142 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~-~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~--~~~~~  142 (544)
                      ..|||.+.|++|+    +..+.... ......+.+.+|||++.++.|.++.++|+|||++++|+.++...|..  +....
T Consensus        32 Gi~~~~p~p~~Gn----~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~  107 (499)
T KOG0158|consen   32 GIPGPKPLPFLGN----LPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYG  107 (499)
T ss_pred             CCCCCCCCCcEec----HHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcC
Confidence            4789999999999    77766532 34445555555599999999999999999999999999988777777  33222


Q ss_pred             Hhh-hhhCCcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHH
Q 009087          143 VSE-FLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGL  221 (544)
Q Consensus       143 ~~~-~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~  221 (544)
                      ... .+...+++.++|+.|+++|..++|.|+..+++.|. ++++++++++++.+++....+..+++.+.+..+|.|||++
T Consensus       108 d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~-~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~  186 (499)
T KOG0158|consen  108 DPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMF-PTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGS  186 (499)
T ss_pred             CCCCcccccCchhccCchHHHHHHhhccccchhhHHHHH-HHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhH
Confidence            222 34446788999999999999999999999999999 9999999999999998655446788999999999999999


Q ss_pred             hhccccCCCCCCCChHHHHHHHHHHHHHHhccCc---hhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009087          222 SVFNYNFDSLTADSPVIDAVYTALKEAELRSTDV---LPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETE  298 (544)
Q Consensus       222 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  298 (544)
                      ++||.+.+++......+................+   +-...+.+..............+.+.+.+.+.++.+    +.+
T Consensus       187 ~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R----~~~  262 (499)
T KOG0158|consen  187 CAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQR----EKE  262 (499)
T ss_pred             hhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHH----Hhc
Confidence            9999999887754444433222211110100000   000001111111111122234444455555555554    221


Q ss_pred             ccccccccccCCCChhHHHHHHhccc----------CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHH
Q 009087          299 GERIDDEEYVNDSDPSILRFLLASRE----------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQ  368 (544)
Q Consensus       299 ~~~~~~~~~~~~~~~~ll~~ll~~~~----------~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr  368 (544)
                                +...+|+++.+++.+.          .+|.+||+++++.+++||+||||+||++++|+||+||++|+|||
T Consensus       263 ----------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLr  332 (499)
T KOG0158|consen  263 ----------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLR  332 (499)
T ss_pred             ----------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHH
Confidence                      3467789999998874          38999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCC-CChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccC-CeeeCCCCEEEEecccccCCCCCCCC
Q 009087          369 EEIDRVLQGRS-PSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPG-NYKVNAGQDIMISVYNIHHSSQVWER  446 (544)
Q Consensus       369 ~Ei~~~~~~~~-~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~-g~~Ip~G~~v~~~~~~~~~d~~~~~d  446 (544)
                      +||++++.+.. +++|.+.+|+||++||+||||+||+++. ..|...+|+.+. ++.||||+.|.++++++||||++|||
T Consensus       333 eEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~  411 (499)
T KOG0158|consen  333 EEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPE  411 (499)
T ss_pred             HHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCC
Confidence            99999976544 9999999999999999999999999998 556666777777 99999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCccccc---ceeEecC
Q 009087          447 AEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTT---GATIHTT  523 (544)
Q Consensus       447 p~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~---~~~~~~~  523 (544)
                      |++|+||||.++.   .+.....+|+|||.|||.|+|++||++|+++.|++||++|+|+..+........   +.++.|+
T Consensus       412 Pe~F~PERF~~~~---~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk  488 (499)
T KOG0158|consen  412 PEKFKPERFEEEN---NKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPK  488 (499)
T ss_pred             cccCCCccCCCCc---ccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecC
Confidence            9999999998553   124566789999999999999999999999999999999999998733222333   7889999


Q ss_pred             CCeeEEEEEec
Q 009087          524 NGLYMKLRQRQ  534 (544)
Q Consensus       524 ~~~~v~~~~r~  534 (544)
                      +|+++++++|.
T Consensus       489 ~gi~Lkl~~r~  499 (499)
T KOG0158|consen  489 GGIWLKLEPRD  499 (499)
T ss_pred             CceEEEEEeCC
Confidence            99999999984


No 5  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.8e-72  Score=577.85  Aligned_cols=457  Identities=17%  Similarity=0.259  Sum_probs=350.6

Q ss_pred             ccCCCCCCCCccCCCcccHHHhhhcc-chHHHHHHHHHhC-CeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhH
Q 009087           65 ITQSDESNIPVASAKLDDVTDLLGGA-LFLPLFKWMNVYG-PIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE  142 (544)
Q Consensus        65 ~~~pgp~~lP~~g~~~~~~~~~~~~~-~~~~l~~~~~kyG-~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  142 (544)
                      ++||||.++|++|+    +..+..+. .+..+.+|.++|| +||++++|+.++|+|+||++++++|.+++..|.+++...
T Consensus        57 ~lPPGP~~lPiiGn----l~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         57 PLPPGPTGFPIVGM----IPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCcCCCCCCcccc----hHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            47999999999999    66554443 3678999999999 799999999999999999999999998877787775322


Q ss_pred             HhhhhhCCc----ccccCCccHHhhhcccCcc-CcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHH
Q 009087          143 VSEFLFGSG----FAIAEGPLWMGRRRAVAPS-LHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLD  217 (544)
Q Consensus       143 ~~~~~~g~~----l~~~~g~~w~~~R~~~~~~-f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~d  217 (544)
                      . ...++.+    ++..+|+.|+++|+++++. ++....+.+. .+++++++.+++.+.+...+++++|+.+.+..+++|
T Consensus       133 ~-~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  210 (543)
T PLN02971        133 A-QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLH-DNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGN  210 (543)
T ss_pred             c-hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHH
Confidence            2 2233433    6677899999999999755 4444555565 778888889988887655556789999999999999


Q ss_pred             HHHHhhccccCCCCC---CCC---hHHHHHHHHHHHHHHhccCchhhhHHHHhhh-c-hhhHHHHHHHHHHHHHHHHHHH
Q 009087          218 VIGLSVFNYNFDSLT---ADS---PVIDAVYTALKEAELRSTDVLPYWKAALCKI-V-PRQIKAEKAVTVIRKTVEELII  289 (544)
Q Consensus       218 vi~~~~fG~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~-p~~~~~~~~~~~~~~~~~~~i~  289 (544)
                      +|++++||.++....   .++   +....+...+..........++.+.+.+..+ . +..+...+..+.+.+++.++++
T Consensus       211 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  290 (543)
T PLN02971        211 AIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIID  290 (543)
T ss_pred             HHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            999999999874321   011   2233333333222111111111111222221 1 2223344456777888888888


Q ss_pred             HHHHHhhhhccccccccccCCCChhHHHHHHhccc-----CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHH
Q 009087          290 KCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSL  364 (544)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-----~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~  364 (544)
                      ++++..+.+.         .....|+++.+++..+     +++++++.+++.++++||+|||+++++|++++|+.||++|
T Consensus       291 ~~~~~~~~~~---------~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq  361 (543)
T PLN02971        291 ERIKMWREGK---------RTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEIL  361 (543)
T ss_pred             HHHHHHhccC---------CCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHH
Confidence            7765433211         1123579999887532     3899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCC
Q 009087          365 MKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQV  443 (544)
Q Consensus       365 ~klr~Ei~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~  443 (544)
                      +|+|+||++++++ +.++.+++++|||++|||+|+||++|++|...+|.+.+|+.++||.||||+.|+++.|++||||++
T Consensus       362 ~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~  441 (543)
T PLN02971        362 HKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKV  441 (543)
T ss_pred             HHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhh
Confidence            9999999999985 568999999999999999999999999998888988899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC-Cccccc-ceeEe
Q 009087          444 WERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-NINMTT-GATIH  521 (544)
Q Consensus       444 ~~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~-~~~~~  521 (544)
                      |+||++|+||||+++............++|||.|+|.|+|++||++|+++++|+||++|+|++.++. ...+.+ +.++.
T Consensus       442 ~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  521 (543)
T PLN02971        442 WSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMF  521 (543)
T ss_pred             CCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcCccc
Confidence            9999999999998542111111234679999999999999999999999999999999999998643 444431 22555


Q ss_pred             cCCCeeEEEEEecCC
Q 009087          522 TTNGLYMKLRQRQHL  536 (544)
Q Consensus       522 ~~~~~~v~~~~r~~~  536 (544)
                      .++.+.|.+++|..+
T Consensus       522 ~~~~~~~~~~~~~~~  536 (543)
T PLN02971        522 LSKPLVMVGELRLSE  536 (543)
T ss_pred             ccccceeeeeecCCc
Confidence            677899999999543


No 6  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.9e-71  Score=570.79  Aligned_cols=441  Identities=25%  Similarity=0.446  Sum_probs=347.9

Q ss_pred             CCCCCCCCccCCCcccHHHhhh------------------ccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHH
Q 009087           67 QSDESNIPVASAKLDDVTDLLG------------------GALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVL  128 (544)
Q Consensus        67 ~pgp~~lP~~g~~~~~~~~~~~------------------~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il  128 (544)
                      ||||.++|++||    +..+..                  +.....+.+|+++|||+|++++|+.+.|+++||+++++++
T Consensus        44 ~PGP~~~P~iGn----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         44 VRGPKPRPLTGN----ILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             CCCCCCCcCCCC----HHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            899999999999    444321                  2333457899999999999999999999999999999999


Q ss_pred             hhcCCCCCCchhh--HHhhhhhCCcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-cee
Q 009087          129 RNYGTKYAKGLVS--EVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNG-TAV  205 (544)
Q Consensus       129 ~~~~~~~~~~~~~--~~~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~-~~v  205 (544)
                      .++.. +..+...  .......|.+++.++|+.|+++|+++.+.|+.++++.+. +.+.++++.+++.|.+....+ .++
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYA-GHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCceE
Confidence            87643 3333321  112334578888899999999999999999999999988 889999999999998755433 589


Q ss_pred             eHHHHHHHHHHHHHHHhhccccCCCCCCCChHHHHHHHHHHHHHHhc-cCchhhhHHHHhhhc-hhhHHHHHHHHHHHHH
Q 009087          206 NMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRS-TDVLPYWKAALCKIV-PRQIKAEKAVTVIRKT  283 (544)
Q Consensus       206 dl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~l~~~~-p~~~~~~~~~~~~~~~  283 (544)
                      |+.+++..+++|++++++||.+++.   .++....+........... ...+|.+    ..+. +...+.....+.+.++
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~p~~~~~~~~~~~~~~~~~  270 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEK---GKQIFHLLTVLQRLCAQATRHLCFPGS----RFFPSKYNREIKSLKGEVERL  270 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCcccc---chHHHHHHHHHHHHHHHhhhhhcCchh----hhCCChhHHHHHHHHHHHHHH
Confidence            9999999999999999999988753   2233333222221111111 1112211    1111 1123344566778888


Q ss_pred             HHHHHHHHHHHhhhhccccccccccCCCChhHHHHHHhccc-------CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 009087          284 VEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE-------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYL  356 (544)
Q Consensus       284 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-------~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~  356 (544)
                      +.+.++++++..+.+.+        +....|+++.+++..+       .++++++.++++++++||+|||+++|+|++++
T Consensus       271 ~~~~i~~~~~~~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~  342 (516)
T PLN02290        271 LMEIIQSRRDCVEIGRS--------SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLML  342 (516)
T ss_pred             HHHHHHHHHHHhhcccC--------CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            88888887664432210        1223578888886421       26888999999999999999999999999999


Q ss_pred             HhhChHHHHHHHHHHHHHhCCCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEeccc
Q 009087          357 LSKDCNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYN  436 (544)
Q Consensus       357 L~~~P~~~~klr~Ei~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~  436 (544)
                      |++||++|+|+|+||+++++++.++.+++++||||+|||+||||++|+++. .+|.+.+|++++||.|||||.|+++.++
T Consensus       343 L~~~P~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~  421 (516)
T PLN02290        343 LASNPTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLA  421 (516)
T ss_pred             HhcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHH
Confidence            999999999999999999987788999999999999999999999999986 5777788999999999999999999999


Q ss_pred             ccCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccc
Q 009087          437 IHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMT  515 (544)
Q Consensus       437 ~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  515 (544)
                      +||||++| +||++|+||||+++.     ......++|||.|+|.|+|++||++|++++++.|+++|+|++.++.+....
T Consensus       422 ~~rdp~~~~~dP~~F~PeRfl~~~-----~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~  496 (516)
T PLN02290        422 IHHSEELWGKDANEFNPDRFAGRP-----FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPV  496 (516)
T ss_pred             hcCChhhhCCChhhcCccccCCCC-----CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCcc
Confidence            99999999 799999999998431     112346999999999999999999999999999999999999876433333


Q ss_pred             cceeEecCCCeeEEEEEec
Q 009087          516 TGATIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       516 ~~~~~~~~~~~~v~~~~r~  534 (544)
                      .+.+..|++|+.|++++|.
T Consensus       497 ~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        497 VVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ceeeecCCCCCeEEEEeCC
Confidence            4578899999999999985


No 7  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.1e-71  Score=560.86  Aligned_cols=455  Identities=30%  Similarity=0.505  Sum_probs=364.2

Q ss_pred             ccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhH-H
Q 009087           65 ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE-V  143 (544)
Q Consensus        65 ~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-~  143 (544)
                      ..+|||.++|++|+.++.....  .....++.++..+||++|+.++|+.+.++++||+.+++|+.+....+.+...+. .
T Consensus        35 ~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   35 KLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             ccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            3489999999999944432222  467788999999999999999999999999999999999976555676765444 7


Q ss_pred             hhhhhCCcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHhh
Q 009087          144 SEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSV  223 (544)
Q Consensus       144 ~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~  223 (544)
                      ...++|.|+++++|+.|+++|+++.++|+.+.++.+. ..+.+++..+...+.... .++.+|+.+.+.++++|+|+..+
T Consensus       113 ~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~-~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~~~~  190 (497)
T KOG0157|consen  113 LKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFV-PVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIICKTA  190 (497)
T ss_pred             HHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHH-HHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHHHHh
Confidence            7788899999999999999999999999999999998 677777777777776633 33339999999999999999999


Q ss_pred             ccccC-C-CCCCCChHHHHHHHHHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 009087          224 FNYNF-D-SLTADSPVIDAVYTALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGER  301 (544)
Q Consensus       224 fG~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  301 (544)
                      ||..- + ......++.+++..+......+...  |.+..++..+ ...++..++.+.+.++++++|+++++...++...
T Consensus       191 ~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~--p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  191 MGPESLDAEGPELFEYVQAFDDLTELISKRINL--PLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             cCCccccccCCcccHHHHHHHHHHHHHHHHHcC--chhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99221 1 1122235555555444444333322  2121222222 2567788899999999999999999876654321


Q ss_pred             cccccccCCCChhHHHHH-HhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCC
Q 009087          302 IDDEEYVNDSDPSILRFL-LASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQGRSP  380 (544)
Q Consensus       302 ~~~~~~~~~~~~~ll~~l-l~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~~~~~  380 (544)
                      .      .....++++.+ ++....+++++|.+++.+|++||+||||++++|+++.|+.||++|+|+++|++++++++..
T Consensus       268 ~------~~~~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~  341 (497)
T KOG0157|consen  268 E------EKKRLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDD  341 (497)
T ss_pred             c------cchhhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCC
Confidence            0      13345788843 3333479999999999999999999999999999999999999999999999999985543


Q ss_pred             Ch--hhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCC-CCCCCCCCCCCC
Q 009087          381 SF--EDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWE-RAEEFLPERFDL  457 (544)
Q Consensus       381 ~~--~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~-dp~~F~P~Rfl~  457 (544)
                      .+  ...++|+||++||+|||||||++|...|++..++.+.+||.||||+.|+++++++|||+++|+ ||++||||||++
T Consensus       342 ~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~  421 (497)
T KOG0157|consen  342 KWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD  421 (497)
T ss_pred             CCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence            33  333369999999999999999999988776666556579999999999999999999999998 999999999985


Q ss_pred             CCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEEEEEec
Q 009087          458 EGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       458 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (544)
                      +....  ..+.++|+|||+|+|.|+|++||++|+++++++|+++|+|+++.+.........++++.+|+.|++++|.
T Consensus       422 ~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  422 GEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCC
Confidence            43221  3446899999999999999999999999999999999999998776555667889999999999999985


No 8  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.1e-70  Score=561.40  Aligned_cols=449  Identities=22%  Similarity=0.365  Sum_probs=348.9

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhcc--chHHHHHHHHHhCCeEE---EecCCceEEEEcChHHHHHHHhhcCCCCCCchh
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGA--LFLPLFKWMNVYGPIYR---LAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV  140 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~--~~~~l~~~~~kyG~i~~---i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~  140 (544)
                      ..|||.++|++|+    +..+.++.  .++.+.+...+||..++   +++|+.++++|+||+++++||.++...|.++..
T Consensus        32 ~~p~p~~~pl~G~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~  107 (500)
T PLN02169         32 GQPILKNWPFLGM----LPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPE  107 (500)
T ss_pred             CCCCCCCCCcccc----hHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHH
Confidence            4689999999999    54444332  23334444444887665   677899999999999999999887667787754


Q ss_pred             hHHhhhhhCCcccccCCccHHhhhcccCccCcHHHHHHH-HHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHH
Q 009087          141 SEVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVI-VDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVI  219 (544)
Q Consensus       141 ~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi  219 (544)
                      ........|+|+++++|+.|+++|+++++.|+...+..+ ....+.++++.+++.+++...+++++|+.+.+..+++|+|
T Consensus       108 ~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        108 FKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             HHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            444445568999999999999999999999998877643 2256677888899998876556778999999999999999


Q ss_pred             HHhhccccCCCCCCC---ChHHHHHHHHHHHHHHhccCchhhhH-HHHhhh-chhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009087          220 GLSVFNYNFDSLTAD---SPVIDAVYTALKEAELRSTDVLPYWK-AALCKI-VPRQIKAEKAVTVIRKTVEELIIKCKEI  294 (544)
Q Consensus       220 ~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~~~-~p~~~~~~~~~~~~~~~~~~~i~~~~~~  294 (544)
                      ++++||.+.++.+..   .++...+.........+  .+.|++. .+..++ .+..++..++.+.+.+++.++|+++++.
T Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~  265 (500)
T PLN02169        188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYR--HFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKE  265 (500)
T ss_pred             HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhH--HhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987654322   23333322222221111  2223221 111111 2234556678888999999999887654


Q ss_pred             hhhhccccccccccCCCChhHHHHHHhccc-------CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHH
Q 009087          295 VETEGERIDDEEYVNDSDPSILRFLLASRE-------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKA  367 (544)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-------~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~kl  367 (544)
                      .....+    .   +....|+++.+++..+       +++++++.+++.++++||+|||+++|+|++++|++||++|+|+
T Consensus       266 ~~~~~~----~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl  338 (500)
T PLN02169        266 EISRAE----T---EPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKI  338 (500)
T ss_pred             hhcccc----c---cCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHH
Confidence            221100    0   1123578888876532       2678899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCC-CC
Q 009087          368 QEEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW-ER  446 (544)
Q Consensus       368 r~Ei~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~d  446 (544)
                      ++||++++     +.+++.+||||+|||+|||||+|++|...|+++.++++++|+.||||+.|+++.|++||||++| +|
T Consensus       339 ~~Ei~~v~-----~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~d  413 (500)
T PLN02169        339 RHEINTKF-----DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGED  413 (500)
T ss_pred             HHHHHhhC-----CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCC
Confidence            99999874     6789999999999999999999999999988888888889999999999999999999999999 79


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCe
Q 009087          447 AEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGL  526 (544)
Q Consensus       447 p~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  526 (544)
                      |++|+||||+++... ........|+|||+|+|.|+|++||++|+++++++||++|+|+++++.++....+.++.+++|+
T Consensus       414 P~~F~PeRfl~~~~~-~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl  492 (500)
T PLN02169        414 ALDFKPERWISDNGG-LRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGL  492 (500)
T ss_pred             hhhcCccccCCCCCC-ccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCE
Confidence            999999999854211 1112357899999999999999999999999999999999999987666655566788999999


Q ss_pred             eEEEEEe
Q 009087          527 YMKLRQR  533 (544)
Q Consensus       527 ~v~~~~r  533 (544)
                      .|++++|
T Consensus       493 ~l~l~~~  499 (500)
T PLN02169        493 KVTVTKK  499 (500)
T ss_pred             EEEEEeC
Confidence            9999987


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.8e-71  Score=568.85  Aligned_cols=446  Identities=21%  Similarity=0.327  Sum_probs=345.9

Q ss_pred             hhhhhcccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCc
Q 009087           59 LTKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKG  138 (544)
Q Consensus        59 l~~~~~~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~  138 (544)
                      ..+.+...+|||.++|++|+    +..+ ...++..+.+|+++||+||++++|+.++|+++||+++++|+.++...|.++
T Consensus        23 ~~~~~~~~~pgp~~~p~~G~----~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r   97 (482)
T PTZ00404         23 YKKIHKNELKGPIPIPILGN----LHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDR   97 (482)
T ss_pred             hhhccCCCCCCCCCCCeecc----Hhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCC
Confidence            34445556899999999999    5544 346789999999999999999999999999999999999998765556554


Q ss_pred             hhhHH-hhhhhCCcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHH
Q 009087          139 LVSEV-SEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLD  217 (544)
Q Consensus       139 ~~~~~-~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~d  217 (544)
                      +.... ....++.|++..+|+.|+++|++++++|+.+.++.+. +.+.++++.+++.|.+....++.+|+.+++..+++|
T Consensus        98 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d  176 (482)
T PTZ00404         98 PKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIY-DLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMS  176 (482)
T ss_pred             CCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHH-HHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHH
Confidence            42222 1223478888999999999999999999999999988 888999999999998755556789999999999999


Q ss_pred             HHHHhhccccCCCCCCC-----ChHHHHHHHHHHHHHHh-ccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHH
Q 009087          218 VIGLSVFNYNFDSLTAD-----SPVIDAVYTALKEAELR-STDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKC  291 (544)
Q Consensus       218 vi~~~~fG~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~  291 (544)
                      +++.++||.+++..+..     ..+...+...+...... ...+++.+.+.+...   .....+..+.+.+++++.++++
T Consensus       177 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~  253 (482)
T PTZ00404        177 AMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQY---LEHTDKNFKKIKKFIKEKYHEH  253 (482)
T ss_pred             HHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988653221     12222222222221110 011111111111111   1112234455555555555544


Q ss_pred             HHHhhhhccccccccccCCCChhHHHHHHhcccCCChH---HHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHH
Q 009087          292 KEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSV---QLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQ  368 (544)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~---ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr  368 (544)
                      ++..+            .....|+++.++++.++.+++   ++.++++++++||+|||+++|+|++++|++||++|+|++
T Consensus       254 ~~~~~------------~~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~  321 (482)
T PTZ00404        254 LKTID------------PEVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAY  321 (482)
T ss_pred             HHccC------------CCCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHH
Confidence            33210            112357999998765444444   488899999999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeeccccccc-CCeeeCCCCEEEEecccccCCCCCCCC
Q 009087          369 EEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLP-GNYKVNAGQDIMISVYNIHHSSQVWER  446 (544)
Q Consensus       369 ~Ei~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~-~g~~Ip~G~~v~~~~~~~~~d~~~~~d  446 (544)
                      +||++++++ +.++.+++++|||++|||+|||||+|++|...+|.+.+|+++ +||.||||+.|.++.+++||||++|+|
T Consensus       322 ~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~d  401 (482)
T PTZ00404        322 NEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFEN  401 (482)
T ss_pred             HHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCC
Confidence            999999985 458999999999999999999999999997667888888888 999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCccc--ccceeEecCC
Q 009087          447 AEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINM--TTGATIHTTN  524 (544)
Q Consensus       447 p~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~  524 (544)
                      |++|+||||+++       .....++|||+|+|.|+|++||++|+++++++|+++|+|++.++++...  ..+.+.. +.
T Consensus       402 P~~F~PeRwl~~-------~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~  473 (482)
T PTZ00404        402 PEQFDPSRFLNP-------DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PN  473 (482)
T ss_pred             ccccCccccCCC-------CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CC
Confidence            999999999743       1346899999999999999999999999999999999999887665432  2355555 67


Q ss_pred             CeeEEEEEe
Q 009087          525 GLYMKLRQR  533 (544)
Q Consensus       525 ~~~v~~~~r  533 (544)
                      ++.|.+++|
T Consensus       474 ~~~v~~~~R  482 (482)
T PTZ00404        474 KFKVLLEKR  482 (482)
T ss_pred             CceeeeecC
Confidence            899999887


No 10 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.6e-70  Score=561.48  Aligned_cols=468  Identities=21%  Similarity=0.343  Sum_probs=361.9

Q ss_pred             chhhhHHhhhhhc-ccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhh
Q 009087           52 SPDWLTSLTKSLT-ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRN  130 (544)
Q Consensus        52 ~~~~~~~l~~~~~-~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~  130 (544)
                      -++++.++..++. +.||||.++|++|+    +..+ ...++..+.+|+++||+||++++|+.++|+|+||+++++++.+
T Consensus        17 ~~~~~~~~~~~~~~~~pPgp~~~Pl~G~----l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~   91 (504)
T PLN00110         17 TRFFIRSLLPKPSRKLPPGPRGWPLLGA----LPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKT   91 (504)
T ss_pred             HHHHHHHHhhcccCCCcccCCCCCeeec----hhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHh
Confidence            4455666666554 36889999999998    4433 3457889999999999999999998999999999999999987


Q ss_pred             cCCCCCCchhhHH-hhhhh--CCcccccCCccHHhhhcccCc-cCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee
Q 009087          131 YGTKYAKGLVSEV-SEFLF--GSGFAIAEGPLWMGRRRAVAP-SLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVN  206 (544)
Q Consensus       131 ~~~~~~~~~~~~~-~~~~~--g~~l~~~~g~~w~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd  206 (544)
                      .+..|.+++.... .....  +.+++..+|+.|+++|+++++ .|+.++++.+. +.+.++++.+++.+.+...+|+++|
T Consensus        92 ~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~-~~i~~~~~~~~~~l~~~~~~g~~~~  170 (504)
T PLN00110         92 LDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWS-QVRTVELGHMLRAMLELSQRGEPVV  170 (504)
T ss_pred             cchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhh-HHHHHHHHHHHHHHHHhccCCCcEe
Confidence            7666776653221 11222  346667789999999999985 79999999888 7777888889999877656678899


Q ss_pred             HHHHHHHHHHHHHHHhhccccCC-CCCC-CChHHHHHHHHHHHHHH-hccCchhhhHHHHhhhc--hhhHHHHHHHHHHH
Q 009087          207 MEEKFSQLTLDVIGLSVFNYNFD-SLTA-DSPVIDAVYTALKEAEL-RSTDVLPYWKAALCKIV--PRQIKAEKAVTVIR  281 (544)
Q Consensus       207 l~~~~~~~~~dvi~~~~fG~~~~-~~~~-~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~l~~~~--p~~~~~~~~~~~~~  281 (544)
                      +.+++..+++|+|+.++||.++. ..+. .+++...+......... ....++|.    +.++.  +..++..+..+.+.
T Consensus       171 ~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----l~~l~~~~~~~~~~~~~~~~~  246 (504)
T PLN00110        171 VPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPS----IAWMDIQGIERGMKHLHKKFD  246 (504)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcch----HhhhCcchHHHHHHHHHHHHH
Confidence            99999999999999999998862 2111 12233333322221110 00112222    22111  11233444566677


Q ss_pred             HHHHHHHHHHHHHhhhhccccccccccCCCChhHHHHHHhcc-----cCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 009087          282 KTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASR-----EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYL  356 (544)
Q Consensus       282 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~-----~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~  356 (544)
                      +++.+.++++++..+.           .....|+++.+++..     .+++++++.++++++++||+|||+++++|++++
T Consensus       247 ~~~~~~i~~~~~~~~~-----------~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~  315 (504)
T PLN00110        247 KLLTRMIEEHTASAHE-----------RKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAE  315 (504)
T ss_pred             HHHHHHHHHHHhhccc-----------cccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHH
Confidence            7777777766543211           112347888888643     248999999999999999999999999999999


Q ss_pred             HhhChHHHHHHHHHHHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecc
Q 009087          357 LSKDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVY  435 (544)
Q Consensus       357 L~~~P~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~  435 (544)
                      |++||++|+|+++|+++++++ +.++.+++++||||+|||+||||++|+++...+|.+.+|+.++||.|||||.|+++.+
T Consensus       316 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~  395 (504)
T PLN00110        316 MLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIW  395 (504)
T ss_pred             HHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHH
Confidence            999999999999999999985 4589999999999999999999999999987788888999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCccc
Q 009087          436 NIHHSSQVWERAEEFLPERFDLEGPMPNES-NTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINM  514 (544)
Q Consensus       436 ~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~  514 (544)
                      ++||||++|+||++|+||||++++...... .....++|||+|+|.|+|++||++|+++++|+|+++|+|++.++.++..
T Consensus       396 ~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~  475 (504)
T PLN00110        396 AIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNM  475 (504)
T ss_pred             HhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCc
Confidence            999999999999999999998543211111 1235799999999999999999999999999999999999987765543


Q ss_pred             --ccceeEecCCCeeEEEEEecCCCccc
Q 009087          515 --TTGATIHTTNGLYMKLRQRQHLNSFV  540 (544)
Q Consensus       515 --~~~~~~~~~~~~~v~~~~r~~~~~~~  540 (544)
                        ..+.++.++.++.|++++|.+.+.|+
T Consensus       476 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~  503 (504)
T PLN00110        476 DEAFGLALQKAVPLSAMVTPRLHQSAYA  503 (504)
T ss_pred             ccccccccccCCCceEeeccCCCchhcc
Confidence              34567788899999999997666554


No 11 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1e-70  Score=565.76  Aligned_cols=462  Identities=20%  Similarity=0.354  Sum_probs=357.5

Q ss_pred             chhhhHHhhhhhc--ccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHh
Q 009087           52 SPDWLTSLTKSLT--ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLR  129 (544)
Q Consensus        52 ~~~~~~~l~~~~~--~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~  129 (544)
                      ...|+......+.  ..||||.++|++|+    +..+...+++..+.+++++||++|++++|+.++|+++||+++++|+.
T Consensus        13 ~~~~~~~~~~~~~~~~~pPgp~~~P~iG~----~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~   88 (499)
T PLN03234         13 AAAFFFLRSTTKKSLRLPPGPKGLPIIGN----LHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLK   88 (499)
T ss_pred             HHHHHHHHHhcCCCCCCCcCCCCCCeecc----HHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHH
Confidence            3344444444432  35889999999999    65554446788999999999999999999999999999999999998


Q ss_pred             hcCCCCCCchhhHHhhh--hhCCcc-cccCCccHHhhhccc-CccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee
Q 009087          130 NYGTKYAKGLVSEVSEF--LFGSGF-AIAEGPLWMGRRRAV-APSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAV  205 (544)
Q Consensus       130 ~~~~~~~~~~~~~~~~~--~~g~~l-~~~~g~~w~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~v  205 (544)
                      +++..|.+++.......  ..+..+ ....++.|+++|+.+ .+.|+.+.+..+. +.+.++++.+++.+.+...+++++
T Consensus        89 ~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~-~~i~~~~~~ll~~l~~~~~~~~~v  167 (499)
T PLN03234         89 TQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFR-PVREEECQRMMDKIYKAADQSGTV  167 (499)
T ss_pred             hCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhH-HHHHHHHHHHHHHHHHhccCCCeE
Confidence            87667776654322211  123332 223578999999974 6999999999888 899999999999998766667789


Q ss_pred             eHHHHHHHHHHHHHHHhhccccCCCCCCCChHHHHHHHHHHHHHHhc-----cCchhhhHHHHhhhchhhHHHHHHHHHH
Q 009087          206 NMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRS-----TDVLPYWKAALCKIVPRQIKAEKAVTVI  280 (544)
Q Consensus       206 dl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~~~~l~~~~p~~~~~~~~~~~~  280 (544)
                      |+.+.+..+++|+++.++||.+++..+.   ....+...........     ...+|++. .+..+.+..++..++.+.+
T Consensus       168 d~~~~~~~~t~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~l~~~~~~~~~~~~~~  243 (499)
T PLN03234        168 DLSELLLSFTNCVVCRQAFGKRYNEYGT---EMKRFIDILYETQALLGTLFFSDLFPYFG-FLDNLTGLSARLKKAFKEL  243 (499)
T ss_pred             EHHHHHHHHHHHHHHHHHhCCcccccch---hHHHHHHHHHHHHHHcCCCcHHHHhhHHH-HhhhhhhHHHHHHHHHHHH
Confidence            9999999999999999999998875322   1222222222221111     11223222 1222223345666788888


Q ss_pred             HHHHHHHHHHHHHHhhhhccccccccccCCCChhHHHHHHhccc------CCChHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 009087          281 RKTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTL  354 (544)
Q Consensus       281 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~------~l~~~ei~~~~~~~~~aG~dtts~tl~~~l  354 (544)
                      .+++.++++++++....           .....|+++.+++..+      .++++++.++++++++||+|||+++++|++
T Consensus       244 ~~~~~~~i~~~~~~~~~-----------~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l  312 (499)
T PLN03234        244 DTYLQELLDETLDPNRP-----------KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAM  312 (499)
T ss_pred             HHHHHHHHHHHHhhccc-----------CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence            99999988876543111           1123467777765421      378999999999999999999999999999


Q ss_pred             HHHhhChHHHHHHHHHHHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEe
Q 009087          355 YLLSKDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMIS  433 (544)
Q Consensus       355 ~~L~~~P~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~  433 (544)
                      ++|++||++|+|+|+||++++++ +.++++++++|||++|||+|+||++|+++...+|.+.+|++++||.|||||.|+++
T Consensus       313 ~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~  392 (499)
T PLN03234        313 TYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVN  392 (499)
T ss_pred             HHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEe
Confidence            99999999999999999999985 45899999999999999999999999999877788888899999999999999999


Q ss_pred             cccccCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC--
Q 009087          434 VYNIHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ--  510 (544)
Q Consensus       434 ~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--  510 (544)
                      .+++||||++| +||++||||||++++...........++|||+|+|.|+|+++|++|+++++|+|+++|+|++.++.  
T Consensus       393 ~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  472 (499)
T PLN03234        393 AWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKP  472 (499)
T ss_pred             hHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCC
Confidence            99999999999 799999999998643211112245679999999999999999999999999999999999998763  


Q ss_pred             -Cccc--ccceeEecCCCeeEEEEEe
Q 009087          511 -NINM--TTGATIHTTNGLYMKLRQR  533 (544)
Q Consensus       511 -~~~~--~~~~~~~~~~~~~v~~~~r  533 (544)
                       .+..  ..|.+..+++.+++..++|
T Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        473 EDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCCcccccccccccCCCeEEEeecC
Confidence             3333  3466777888888777765


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.8e-70  Score=562.10  Aligned_cols=452  Identities=21%  Similarity=0.332  Sum_probs=344.2

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHHhh
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSE  145 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  145 (544)
                      .||||.++|++|+    +..+..+..+..+.+|+++||+||++++|+.++|+|+||+.+++|+.+++..+.+++......
T Consensus        31 ~pPgp~~~p~~g~----l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         31 LPPGPAAVPIFGN----WLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CCcCCCCCCeeee----HHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            5889999999999    555444446789999999999999999998899999999999999987665566543322333


Q ss_pred             hhhC---CcccccCCccHHhhhcccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCceeeHHHHHHHHHHHHHH
Q 009087          146 FLFG---SGFAIAEGPLWMGRRRAVA-PSLHKKYLSVIVDCVFCKCAERLVERLQTDAL-NGTAVNMEEKFSQLTLDVIG  220 (544)
Q Consensus       146 ~~~g---~~l~~~~g~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~dvi~  220 (544)
                      .+.|   .+++..+|+.|+++|+.+. +.|+.+.++.+. +.++++++.++++|.+... .++.+|+.+++..+++|+++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~-~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~  185 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYR-YGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMY  185 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhh-HHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHH
Confidence            3333   3467778999999999986 999999998887 7888999999999976432 24569999999999999999


Q ss_pred             HhhccccCCCCCCCChHHHHHHHHHHHHHHhc-------cCchhhhHHHHhhhchhhHHHHHHHHHHHH-HHHHHHHHHH
Q 009087          221 LSVFNYNFDSLTADSPVIDAVYTALKEAELRS-------TDVLPYWKAALCKIVPRQIKAEKAVTVIRK-TVEELIIKCK  292 (544)
Q Consensus       221 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~-~~~~~i~~~~  292 (544)
                      +++||.+++..+  ++....+...........       ..++|++.+.+..+   .+..........+ +.+.++++++
T Consensus       186 ~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~  260 (503)
T PLN02394        186 RMMFDRRFESED--DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGY---LKICQDVKERRLALFKDYFVDERK  260 (503)
T ss_pred             HHHhCCCccccc--chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987532  233333333322211111       12233322211111   1111111111122 2333455554


Q ss_pred             HHhhhhccccccccccCCCChhHHHHHHhcc--cCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHH
Q 009087          293 EIVETEGERIDDEEYVNDSDPSILRFLLASR--EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEE  370 (544)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~--~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~E  370 (544)
                      +..+.....       .....|+++.+++..  ++++++++..++.++++||+|||+++++|++++|++||++|+|||+|
T Consensus       261 ~~~~~~~~~-------~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~E  333 (503)
T PLN02394        261 KLMSAKGMD-------KEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDE  333 (503)
T ss_pred             HHhhhccCC-------cchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            432211000       122457899998754  35899999999999999999999999999999999999999999999


Q ss_pred             HHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCC
Q 009087          371 IDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEE  449 (544)
Q Consensus       371 i~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~  449 (544)
                      |+++++. +.++.+++++||||+|||+|+||++|++|...+|.+.+|+.++||.||+||.|+++.+++||||++|+||++
T Consensus       334 i~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~  413 (503)
T PLN02394        334 LDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEE  413 (503)
T ss_pred             HHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccc
Confidence            9999985 457899999999999999999999999999888888888889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC-Ccccc---cceeEecCCC
Q 009087          450 FLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-NINMT---TGATIHTTNG  525 (544)
Q Consensus       450 F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~---~~~~~~~~~~  525 (544)
                      |+||||+++++..........++|||+|+|+|+|++||++|+++++|+|+++|+|++.+|. .+...   +++++..+..
T Consensus       414 F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (503)
T PLN02394        414 FRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKH  493 (503)
T ss_pred             cCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCC
Confidence            9999998543211112245679999999999999999999999999999999999998776 34433   2356656778


Q ss_pred             eeEEEEEec
Q 009087          526 LYMKLRQRQ  534 (544)
Q Consensus       526 ~~v~~~~r~  534 (544)
                      ..+++.+|.
T Consensus       494 ~~~~~~~r~  502 (503)
T PLN02394        494 STVVFKPRS  502 (503)
T ss_pred             ceEEeecCC
Confidence            999999985


No 13 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=6.7e-70  Score=561.13  Aligned_cols=452  Identities=25%  Similarity=0.436  Sum_probs=352.2

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHh---CCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhh-
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVY---GPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVS-  141 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~ky---G~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~-  141 (544)
                      .+|||.++|++|+    +..++.  .+..+.+|.++|   |++|++++|+.+.++++||+++++|+.++...+.++... 
T Consensus        31 ~~pgp~~~p~~G~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  104 (516)
T PLN03195         31 NRKGPKSWPIIGA----ALEQLK--NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYH  104 (516)
T ss_pred             ccCCCCCCCeecc----hHHHHh--ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHH
Confidence            3789999999999    444332  245577888888   899999999999999999999999998754556666433 


Q ss_pred             HHhhhhhCCcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHH
Q 009087          142 EVSEFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGL  221 (544)
Q Consensus       142 ~~~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~  221 (544)
                      .....++|.+++..+|+.|+++|+++++.|+.++++.+.+.++.++++.+++.+.+....++++|+.+++..+++|+|+.
T Consensus       105 ~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  184 (516)
T PLN03195        105 SYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICK  184 (516)
T ss_pred             HHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHH
Confidence            23334567888888999999999999999999999998844557778888888876444567899999999999999999


Q ss_pred             hhccccCCCCCCC---ChHHHHHHHHHHHHHHhccCchhhhHHHHhhh-chhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009087          222 SVFNYNFDSLTAD---SPVIDAVYTALKEAELRSTDVLPYWKAALCKI-VPRQIKAEKAVTVIRKTVEELIIKCKEIVET  297 (544)
Q Consensus       222 ~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  297 (544)
                      ++||.+++..+.+   ..+.+.+...........  +.|.|. +...+ .+..+...+..+.+.+++.+.++++++...+
T Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        185 VGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRF--IDPLWK-LKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HHhCCCccccccCCCccHHHHHHHHHHHHHHHHH--hcchhh-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998765432   233333322221111111  112221 10111 1112333456777888888888877655432


Q ss_pred             hccccccccccCCCChhHHHHHHhccc----CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 009087          298 EGERIDDEEYVNDSDPSILRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDR  373 (544)
Q Consensus       298 ~~~~~~~~~~~~~~~~~ll~~ll~~~~----~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~  373 (544)
                      ....  .    +....|+++.+++..+    +++++++.++++++++||+|||+++++|++++|++||++|+|||+||++
T Consensus       262 ~~~~--~----~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~  335 (516)
T PLN03195        262 ARKS--G----KKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKA  335 (516)
T ss_pred             cccc--c----ccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            1100  0    1224579998886532    4899999999999999999999999999999999999999999999999


Q ss_pred             HhCC---------------------CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEE
Q 009087          374 VLQG---------------------RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMI  432 (544)
Q Consensus       374 ~~~~---------------------~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~  432 (544)
                      +.++                     +.++++++++||||+|||+||||++|++|...|++..++++++|+.||||+.|++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~  415 (516)
T PLN03195        336 LEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTY  415 (516)
T ss_pred             hhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEE
Confidence            8642                     3478999999999999999999999999999888777777779999999999999


Q ss_pred             ecccccCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCC
Q 009087          433 SVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQN  511 (544)
Q Consensus       433 ~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  511 (544)
                      +.+++||||++| +||++|+||||++++..  .......++|||+|+|.|+|++||++|+++++|.|+++|++++.++.+
T Consensus       416 ~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~  493 (516)
T PLN03195        416 VPYSMGRMEYNWGPDAASFKPERWIKDGVF--QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP  493 (516)
T ss_pred             ehHhhccChhhhccChhhcCCcccCCCCCc--CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc
Confidence            999999999999 89999999999853210  122345799999999999999999999999999999999999987766


Q ss_pred             cccccceeEecCCCeeEEEEEec
Q 009087          512 INMTTGATIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       512 ~~~~~~~~~~~~~~~~v~~~~r~  534 (544)
                      .......+..|++|+.|++++|.
T Consensus       494 ~~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        494 VKYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             ceeeeeeEEecCCCEEEEEEeCC
Confidence            65555567889999999999874


No 14 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.1e-69  Score=558.95  Aligned_cols=460  Identities=23%  Similarity=0.319  Sum_probs=354.6

Q ss_pred             hcccCCCCCCCCccCCCcccHHHhh--hccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchh
Q 009087           63 LTITQSDESNIPVASAKLDDVTDLL--GGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV  140 (544)
Q Consensus        63 ~~~~~pgp~~lP~~g~~~~~~~~~~--~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~  140 (544)
                      |.++||||.++|++|+    +..+.  ...++..+.+|+++||++|++++|+.+.|+|+||+++++++.+++..|.+++.
T Consensus        33 ~~~lpPgp~~~pl~G~----l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~  108 (519)
T PLN00168         33 GRRLPPGPPAVPLLGS----LVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPA  108 (519)
T ss_pred             CCCCCcCCCCCccccc----HHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCc
Confidence            4457889999999999    54332  23467889999999999999999999999999999999999887777776654


Q ss_pred             hHHhhhhhC--Ccccc--cCCccHHhhhc-ccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHH
Q 009087          141 SEVSEFLFG--SGFAI--AEGPLWMGRRR-AVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLT  215 (544)
Q Consensus       141 ~~~~~~~~g--~~l~~--~~g~~w~~~R~-~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  215 (544)
                      ..... ++|  .+++.  .+|+.|+++|| ++.++|+.++++.+. +.+.++++.+++.+.+....++.+|+.+.+..++
T Consensus       109 ~~~~~-~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~  186 (519)
T PLN00168        109 VASSR-LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFA-PARAWVRRVLVDKLRREAEDAAAPRVVETFQYAM  186 (519)
T ss_pred             ccchh-hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHH
Confidence            32222 223  23333  67999999886 799999999999998 8899999999999987554556789999999999


Q ss_pred             HHHHHHhhccccCCCCCCCChHHHHHHHHHHHHH---Hh---ccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHH
Q 009087          216 LDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAE---LR---STDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELII  289 (544)
Q Consensus       216 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~  289 (544)
                      .++++.++||.+++.     +....+........   ..   ...++|.+...+  ..+...+..++.+.+.+++.++++
T Consensus       187 ~~ii~~~~fG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~--~~~~~~~~~~~~~~~~~~~~~~i~  259 (519)
T PLN00168        187 FCLLVLMCFGERLDE-----PAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL--FRGRLQKALALRRRQKELFVPLID  259 (519)
T ss_pred             HHHHHHHHcCCCcCh-----hhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh--hhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998753     11122222222111   00   112233222111  011233445677888889999998


Q ss_pred             HHHHHhhhhccccccccccCCCChhHHHHHHhcc------cCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHH
Q 009087          290 KCKEIVETEGERIDDEEYVNDSDPSILRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNS  363 (544)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~------~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~  363 (544)
                      ++++..+...+.............|+++.|++..      ..++++++.++++++++||+|||+++++|++++|++||++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~  339 (519)
T PLN00168        260 ARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSI  339 (519)
T ss_pred             HHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHH
Confidence            8765432110000000000011357888888642      2489999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC--CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCC
Q 009087          364 LMKAQEEIDRVLQG--RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSS  441 (544)
Q Consensus       364 ~~klr~Ei~~~~~~--~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~  441 (544)
                      |+|+++||++++++  +.++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||
T Consensus       340 q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~  419 (519)
T PLN00168        340 QSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDE  419 (519)
T ss_pred             HHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCc
Confidence            99999999999975  3589999999999999999999999999888888889999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC--C-CCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccc--c
Q 009087          442 QVWERAEEFLPERFDLEGPMP--N-ESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMT--T  516 (544)
Q Consensus       442 ~~~~dp~~F~P~Rfl~~~~~~--~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~--~  516 (544)
                      ++|+||++|+||||++++...  . .......++|||+|+|+|+|++||++|+++++++||++|+|++.++.++...  .
T Consensus       420 ~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  499 (519)
T PLN00168        420 REWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKR  499 (519)
T ss_pred             cccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhc
Confidence            999999999999998542110  0 1123457999999999999999999999999999999999999876554432  4


Q ss_pred             ceeEecCCCeeEEEEEecC
Q 009087          517 GATIHTTNGLYMKLRQRQH  535 (544)
Q Consensus       517 ~~~~~~~~~~~v~~~~r~~  535 (544)
                      +.+..++++++|++++|.+
T Consensus       500 ~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        500 EFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             eeEEeecCCcEEEEEeccC
Confidence            5677788899999999864


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.5e-69  Score=550.98  Aligned_cols=446  Identities=22%  Similarity=0.313  Sum_probs=348.2

Q ss_pred             CCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHHhhh
Q 009087           67 QSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSEF  146 (544)
Q Consensus        67 ~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  146 (544)
                      ||||.++|++|+    +..+...+++..+.+|+++||+||++++|++++|+|+||+++++|+.++...|.+++.......
T Consensus         1 ppgp~~lP~iG~----l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~   76 (466)
T PLN02655          1 VPAVPGLPVIGN----LLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTV   76 (466)
T ss_pred             CcCCCCCCcccc----HHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHH
Confidence            689999999999    6666556689999999999999999999999999999999999999887767776654444443


Q ss_pred             hhCC--ccccc-CCccHHhhhcccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceeeHHHHHHHHHHHHHH
Q 009087          147 LFGS--GFAIA-EGPLWMGRRRAVA-PSLHKKYLSVIVDCVFCKCAERLVERLQTDAL--NGTAVNMEEKFSQLTLDVIG  220 (544)
Q Consensus       147 ~~g~--~l~~~-~g~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~dvi~  220 (544)
                      +.+.  +++.. +|+.|+++|+.+. +.|+...++.+. +.+.+.++.+++.+.+...  .++++|+.+.+..+++|+++
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFR-DTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhH-HHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHH
Confidence            4442  34444 4899999998665 556766677666 7777888888888876443  45689999999999999999


Q ss_pred             HhhccccCCCCCCCC---hH--HHHHHHHHHHHHHhc-----cCchhhhHHHHhhhch--hhHHHHHHHHHHHHHHHHHH
Q 009087          221 LSVFNYNFDSLTADS---PV--IDAVYTALKEAELRS-----TDVLPYWKAALCKIVP--RQIKAEKAVTVIRKTVEELI  288 (544)
Q Consensus       221 ~~~fG~~~~~~~~~~---~~--~~~~~~~~~~~~~~~-----~~~~p~~~~~l~~~~p--~~~~~~~~~~~~~~~~~~~i  288 (544)
                      .++||.+++.....+   ..  .+.+...........     ..++|++.    ++..  ......+....+.+++++++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i  231 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLS----WIPNKSFETRVQTTEFRRTAVMKALI  231 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhh----hcCchhHHHHHHHHHHHHHHHHHHHH
Confidence            999999877543211   10  111222222221111     12334321    1111  11122222334456777777


Q ss_pred             HHHHHHhhhhccccccccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHH
Q 009087          289 IKCKEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQ  368 (544)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr  368 (544)
                      +++++.....           ....|+++.+++..+.++++++.++++++++||+|||+++|+|++++|++||++|+|+|
T Consensus       232 ~~~~~~~~~~-----------~~~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~  300 (466)
T PLN02655        232 KQQKKRIARG-----------EERDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLY  300 (466)
T ss_pred             HHHHHhhcCC-----------CCcccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            7666543221           12347999999887779999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCC
Q 009087          369 EEIDRVLQGRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAE  448 (544)
Q Consensus       369 ~Ei~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~  448 (544)
                      +||++++++..++.++++++|||+|||+||||++|+++...+|.+.+|+.++||.||||+.|+++.+++||||++|+||+
T Consensus       301 ~Ei~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~  380 (466)
T PLN02655        301 REIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPE  380 (466)
T ss_pred             HHHHHHhCCCCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChh
Confidence            99999998777999999999999999999999999999888888888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCC-cccccceeEecCCCee
Q 009087          449 EFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQN-INMTTGATIHTTNGLY  527 (544)
Q Consensus       449 ~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~  527 (544)
                      +|+||||++++.   .......++|||+|+|.|+|++||+.|+++++++||++|+|++.++.. ..-..+.+..+++++.
T Consensus       381 ~F~PeR~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (466)
T PLN02655        381 EWDPERFLGEKY---ESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLH  457 (466)
T ss_pred             ccCccccCCCCc---ccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcE
Confidence            999999985421   112346899999999999999999999999999999999999986542 2223466788999999


Q ss_pred             EEEEEecC
Q 009087          528 MKLRQRQH  535 (544)
Q Consensus       528 v~~~~r~~  535 (544)
                      |++++|..
T Consensus       458 ~~~~~r~~  465 (466)
T PLN02655        458 AHLKPRGS  465 (466)
T ss_pred             EEEeecCC
Confidence            99998853


No 16 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-69  Score=515.98  Aligned_cols=450  Identities=24%  Similarity=0.353  Sum_probs=372.3

Q ss_pred             CCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEe-cCCceEEEEcChHHHHHHHhhcCCCCCCch----hh
Q 009087           67 QSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLA-AGPRNFVVVSDPAIAKHVLRNYGTKYAKGL----VS  141 (544)
Q Consensus        67 ~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~-~g~~~~vvv~dp~~i~~il~~~~~~~~~~~----~~  141 (544)
                      .|||.++|+++..+. +......+.|+....++++|||||+.. +|+...|++.||+++..++++++ .++-++    .+
T Consensus        52 IP~p~~~~~l~~l~~-~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~~w  129 (519)
T KOG0159|consen   52 IPGPKGLPFLGLLWI-WRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIEPW  129 (519)
T ss_pred             cCCCCCccHHHHHHH-HHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccchh
Confidence            788999999998221 112223467888999999999999999 88899999999999999999887 345442    12


Q ss_pred             HHhhhhh--CCcccccCCccHHhhhcccCccC-cHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCceeeHHHHHHHHH
Q 009087          142 EVSEFLF--GSGFAIAEGPLWMGRRRAVAPSL-HKKYLSVIVDCVFCKCAERLVERLQTDAL---NGTAVNMEEKFSQLT  215 (544)
Q Consensus       142 ~~~~~~~--g~~l~~~~g~~w~~~R~~~~~~f-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~~  215 (544)
                      ......+  ..|++..+|+.|++.|..+++.+ .++.++.+. +.++.+++++++.++....   ...+.|+.+.+.+++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl-~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYL-PQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHh-hHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence            2223333  36899999999999999999886 678888888 8999999999999998765   234789999999999


Q ss_pred             HHHHHHhhccccCCCCCCC-ChHHHHHHHHHHHHHHhcc--Cch-hhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHH
Q 009087          216 LDVIGLSVFNYNFDSLTAD-SPVIDAVYTALKEAELRST--DVL-PYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKC  291 (544)
Q Consensus       216 ~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~  291 (544)
                      ++.||.++||.+++++... ++..+.+..+++.++....  .+. ++|. ++.  .+.+++..++++.+.++..++|+.+
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r-~~~--t~~wk~~~~~~D~i~~~~~~~Id~~  285 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWR-YFP--TKVWKDFVRAWDQIFDVGDKYIDNA  285 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHH-hCC--ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999874 4555555555555443221  122 3332 111  2457788899999999999999999


Q ss_pred             HHHhhhhccccccccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHH
Q 009087          292 KEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEI  371 (544)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei  371 (544)
                      .+..+.....       .......+-.++.. .+++.+++..++++++.||.||||.|+.|+||+|++||++|++|++|+
T Consensus       286 l~~l~~~~~~-------~~~~~~~l~~~L~~-~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei  357 (519)
T KOG0159|consen  286 LEELEKQDSA-------GSEYTGSLLELLLR-KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEI  357 (519)
T ss_pred             HHHHHhcccc-------ccchhHHHHHHHHH-ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            8887765321       01223344444432 358999999999999999999999999999999999999999999999


Q ss_pred             HHHhCC--CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCC
Q 009087          372 DRVLQG--RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEE  449 (544)
Q Consensus       372 ~~~~~~--~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~  449 (544)
                      ..+..+  ..++.+++.+||||.||||||+||||.+|++. |+..+|.+++||.|||||.|.++.+.+.+||++|++|++
T Consensus       358 ~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  358 LAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             HhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            999975  35899999999999999999999999988766 788888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEE
Q 009087          450 FLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMK  529 (544)
Q Consensus       450 F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~  529 (544)
                      |+||||+.++.   ...+...++|||.|+|+|+|+++|++|+.++||+++++|+++..+..++.+...+++.|..++..+
T Consensus       437 F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~f~  513 (519)
T KOG0159|consen  437 FLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLRFK  513 (519)
T ss_pred             cChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCccee
Confidence            99999997642   456788999999999999999999999999999999999999998888988888899999999999


Q ss_pred             EEEec
Q 009087          530 LRQRQ  534 (544)
Q Consensus       530 ~~~r~  534 (544)
                      +++|.
T Consensus       514 f~~r~  518 (519)
T KOG0159|consen  514 FRPRN  518 (519)
T ss_pred             eeeCC
Confidence            99985


No 17 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.2e-69  Score=555.18  Aligned_cols=447  Identities=24%  Similarity=0.364  Sum_probs=350.9

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHHhh
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSE  145 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  145 (544)
                      .||||.++|++|+    +..+ ..+++..+.+|+++||+||++++|+.++++++||+++++++.++...|.+++......
T Consensus        35 ~pPgp~~~P~iG~----~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~  109 (517)
T PLN02687         35 LPPGPRGWPVLGN----LPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE  109 (517)
T ss_pred             CCccCCCCCcccc----HHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence            5889999999999    5544 3457889999999999999999999999999999999999987766677664322222


Q ss_pred             hh---hCCcccccCCccHHhhhcccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHH
Q 009087          146 FL---FGSGFAIAEGPLWMGRRRAVA-PSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGL  221 (544)
Q Consensus       146 ~~---~g~~l~~~~g~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~  221 (544)
                      .+   .+.+++..+|+.|+++|+++. +.|+.+.++.+. +.+.++++.+++.|.+. .+++++|+.+++..+++|+|+.
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~-~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~  187 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFR-HVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGR  187 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhH-HHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHH
Confidence            22   234455567999999999998 899999999998 89999999999999764 3456899999999999999999


Q ss_pred             hhccccCCCCCCCChHHHHHHHHHHHHHHhcc-----CchhhhHHHHhhhch--hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009087          222 SVFNYNFDSLTADSPVIDAVYTALKEAELRST-----DVLPYWKAALCKIVP--RQIKAEKAVTVIRKTVEELIIKCKEI  294 (544)
Q Consensus       222 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~p~~~~~l~~~~p--~~~~~~~~~~~~~~~~~~~i~~~~~~  294 (544)
                      ++||.++...+.+ +....+...+........     .++|.    +.++.+  ...+..+..+.+.+++.++++++++.
T Consensus       188 ~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~----l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  262 (517)
T PLN02687        188 AMVGRRVFAGDGD-EKAREFKEMVVELMQLAGVFNVGDFVPA----LRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAA  262 (517)
T ss_pred             HHhCccccccCCc-chHHHHHHHHHHHHHHhccCcHHHHhhh----HHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999987654322 122223333332221111     12232    222211  12344456777788888888877654


Q ss_pred             hhhhccccccccccCCCChhHHHHHHhcc---------cCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHH
Q 009087          295 VETEGERIDDEEYVNDSDPSILRFLLASR---------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLM  365 (544)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~ll~~ll~~~---------~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~  365 (544)
                      .+..          +....|+++.+++..         ..++++++.++++++++||+|||+++++|++++|++||++|+
T Consensus       263 ~~~~----------~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~  332 (517)
T PLN02687        263 GQTG----------SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILK  332 (517)
T ss_pred             cccc----------CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHH
Confidence            3211          122357999988642         248899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCC
Q 009087          366 KAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW  444 (544)
Q Consensus       366 klr~Ei~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~  444 (544)
                      |+++||++++++ +.++.+++++||||+|||+|+||++|+++...+|.+.+|+.++||.||+||.|.++.+++||||++|
T Consensus       333 kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~  412 (517)
T PLN02687        333 KAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQW  412 (517)
T ss_pred             HHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccC
Confidence            999999999874 4689999999999999999999999999987788889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCC--CCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC---Ccccc--cc
Q 009087          445 ERAEEFLPERFDLEGPMPN--ESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ---NINMT--TG  517 (544)
Q Consensus       445 ~dp~~F~P~Rfl~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~--~~  517 (544)
                      +||++|+||||++++....  .......++|||+|+|.|+|++||.+|+++++|+||++|+|++.++.   ++...  .+
T Consensus       413 ~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  492 (517)
T PLN02687        413 PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYG  492 (517)
T ss_pred             CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccc
Confidence            9999999999985422111  11234579999999999999999999999999999999999998654   23322  23


Q ss_pred             eeEecCCCeeEEEEEec
Q 009087          518 ATIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       518 ~~~~~~~~~~v~~~~r~  534 (544)
                      .+..+..++.|++++|.
T Consensus       493 ~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        493 LTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             eeeecCCCeEEeeccCC
Confidence            44455667888888883


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.2e-69  Score=555.70  Aligned_cols=436  Identities=20%  Similarity=0.295  Sum_probs=334.3

Q ss_pred             ccCCCCCCCCccCCCcccHHHhh----hccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchh
Q 009087           65 ITQSDESNIPVASAKLDDVTDLL----GGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV  140 (544)
Q Consensus        65 ~~~pgp~~lP~~g~~~~~~~~~~----~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~  140 (544)
                      +.||||.++|++||    +..++    .+.++..+.+++++||++|++++|++++|+|+||++++++|.+++..|.++..
T Consensus        38 ~~PPgp~~~PiiGn----~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         38 NLPPGNMGWPFLGE----TIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             CCCCCCcCCCchhh----HHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            35889999999999    43332    24567788999999999999999999999999999999999877655643322


Q ss_pred             hHHhhhhhC-CcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHH
Q 009087          141 SEVSEFLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVI  219 (544)
Q Consensus       141 ~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi  219 (544)
                      .. ...++| .+++..+|+.|+++|+++++.|+...++....+.+.+.+..+++.+.    .++.+|+.+.+..+++|++
T Consensus       114 ~~-~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~vi  188 (490)
T PLN02500        114 RS-IGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKFTFNLM  188 (490)
T ss_pred             hH-HHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHHHHHHH
Confidence            11 122334 46788899999999999999999988876322666777777766663    3457999999999999999


Q ss_pred             HHhhccccCCCCCCCChHHHHHHHHHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009087          220 GLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEG  299 (544)
Q Consensus       220 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  299 (544)
                      ++++||.+.+..+ .......+......... ....+|.         ...++..++.+.+.+++.+.++++++..+.+.
T Consensus       189 ~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~p~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  257 (490)
T PLN02500        189 AKHIMSMDPGEEE-TEQLKKEYVTFMKGVVS-APLNFPG---------TAYRKALKSRATILKFIERKMEERIEKLKEED  257 (490)
T ss_pred             HHHHhCCCCCchH-HHHHHHHHHHHHhhhhc-chhcCCC---------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            9999998754210 11111122222211100 0000110         11234445677888888888888765433221


Q ss_pred             cccccccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhC---
Q 009087          300 ERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQ---  376 (544)
Q Consensus       300 ~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~---  376 (544)
                      .        .....|+++.+++. .+++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++++   
T Consensus       258 ~--------~~~~~d~l~~ll~~-~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~  328 (490)
T PLN02500        258 E--------SVEEDDLLGWVLKH-SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKK  328 (490)
T ss_pred             C--------CCCcchHHHHHHhc-cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccc
Confidence            0        11235799998875 35899999999999999999999999999999999999999999999999863   


Q ss_pred             ---CCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCCCCCC
Q 009087          377 ---GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPE  453 (544)
Q Consensus       377 ---~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~  453 (544)
                         ++.++.+++++|||++|||+||||++|++|.. .|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       329 ~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~Pe  407 (490)
T PLN02500        329 QSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPW  407 (490)
T ss_pred             cCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChh
Confidence               34589999999999999999999999999885 57778899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC----CCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEE
Q 009087          454 RFDLEGPMPN----ESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMK  529 (544)
Q Consensus       454 Rfl~~~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~  529 (544)
                      ||++++....    .......++|||+|+|.|+|++||++|+++++|+|+++|+|++.+++.... .. ...+++|+.|+
T Consensus       408 Rfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~-~~~~~~~l~~~  485 (490)
T PLN02500        408 RWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FP-FVDFPKGLPIR  485 (490)
T ss_pred             hccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-cc-cccCCCCceEE
Confidence            9985421110    012346799999999999999999999999999999999999986654222 12 33556899999


Q ss_pred             EEE
Q 009087          530 LRQ  532 (544)
Q Consensus       530 ~~~  532 (544)
                      +++
T Consensus       486 ~~~  488 (490)
T PLN02500        486 VRR  488 (490)
T ss_pred             EEe
Confidence            876


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4.1e-69  Score=552.92  Aligned_cols=449  Identities=23%  Similarity=0.370  Sum_probs=340.7

Q ss_pred             hhcccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhh
Q 009087           62 SLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVS  141 (544)
Q Consensus        62 ~~~~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~  141 (544)
                      .+.+.||||.++|++|+    +..+...+++..+.+|+++||++|++++|+.++|+|+||+++++|+.+++..|.+++..
T Consensus        26 ~~~~~ppgp~~~p~~G~----l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~  101 (502)
T PLN02966         26 KRYKLPPGPSPLPVIGN----LLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPH  101 (502)
T ss_pred             CCCCCCcCCCCCCeecc----HHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCC
Confidence            34456899999999999    66655556889999999999999999999999999999999999998766566654322


Q ss_pred             HHhhhh-hC-Ccc-cccCCccHHhhhcc-cCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHH
Q 009087          142 EVSEFL-FG-SGF-AIAEGPLWMGRRRA-VAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLD  217 (544)
Q Consensus       142 ~~~~~~-~g-~~l-~~~~g~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~d  217 (544)
                      ...... .| .++ +..+|+.|+.+|++ +++.|+.+.+..+. +.+.++++++++.|.+....++++|+.+++..+++|
T Consensus       102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~d  180 (502)
T PLN02966        102 RGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFK-HVREEEARRMMDKINKAADKSEVVDISELMLTFTNS  180 (502)
T ss_pred             ccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHH
Confidence            111111 22 222 34569999999998 88999999999888 899999999999998765566789999999999999


Q ss_pred             HHHHhhccccCCCCCCCChHHHHHHHHHHHHHHhc-----cCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009087          218 VIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRS-----TDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCK  292 (544)
Q Consensus       218 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~  292 (544)
                      +|+.++||.+++..+.   ....+...+.......     ..++|++. .+..+.+.........+.+.+++.+.+++..
T Consensus       181 vi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (502)
T PLN02966        181 VVCRQAFGKKYNEDGE---EMKRFIKILYGTQSVLGKIFFSDFFPYCG-FLDDLSGLTAYMKECFERQDTYIQEVVNETL  256 (502)
T ss_pred             HHHHHHhCCccCccch---HHHHHHHHHHHHHHHhCcccHHHhhchhh-hhhhhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998875321   2222333332221111     12223211 1111111111222344555666666665543


Q ss_pred             HHhhhhccccccccccCCCChhHHHHHHhcc------cCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHH
Q 009087          293 EIVETEGERIDDEEYVNDSDPSILRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMK  366 (544)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~------~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~k  366 (544)
                      +....           +....++++.+++..      ..++++++.++++++++||+|||+++|+|++++|++||++|+|
T Consensus       257 ~~~~~-----------~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~k  325 (502)
T PLN02966        257 DPKRV-----------KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKK  325 (502)
T ss_pred             hcccc-----------ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHH
Confidence            21100           112346787777532      2478999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCC---CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCC
Q 009087          367 AQEEIDRVLQG---RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQV  443 (544)
Q Consensus       367 lr~Ei~~~~~~---~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~  443 (544)
                      +++||++++++   ..++.+++++||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.++.+++||||++
T Consensus       326 l~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~  405 (502)
T PLN02966        326 AQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKE  405 (502)
T ss_pred             HHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCccc
Confidence            99999999863   347999999999999999999999999998777888899999999999999999999999999999


Q ss_pred             C-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCC---cccc--cc
Q 009087          444 W-ERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQN---INMT--TG  517 (544)
Q Consensus       444 ~-~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~--~~  517 (544)
                      | +||++|+||||+++..  ........++|||+|+|.|+|++||++|+++++|+||++|+|++.++.+   +..+  .|
T Consensus       406 ~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~  483 (502)
T PLN02966        406 WGPNPDEFRPERFLEKEV--DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTG  483 (502)
T ss_pred             ccCChhhCChhhhcCCCC--CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccC
Confidence            9 9999999999985421  1112456799999999999999999999999999999999999987642   3222  35


Q ss_pred             eeEecCCCeeEEEEEec
Q 009087          518 ATIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       518 ~~~~~~~~~~v~~~~r~  534 (544)
                      .+..++.  ++++++|+
T Consensus       484 ~~~~~~~--~~~~~~~~  498 (502)
T PLN02966        484 LAMHKSQ--HLKLVPEK  498 (502)
T ss_pred             eeeccCC--CeEEEEEe
Confidence            4444444  55666665


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.1e-69  Score=556.84  Aligned_cols=445  Identities=29%  Similarity=0.484  Sum_probs=355.1

Q ss_pred             CCCCCCCCccCCCcccHHHhh-hccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHH--
Q 009087           67 QSDESNIPVASAKLDDVTDLL-GGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEV--  143 (544)
Q Consensus        67 ~pgp~~lP~~g~~~~~~~~~~-~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~--  143 (544)
                      ||||.++|++|+    +..+. .++++..+.+++++|||||+++++++++++|+||+++++|+.+.+..+........  
T Consensus         1 Ppgp~~~p~~G~----~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~   76 (463)
T PF00067_consen    1 PPGPPPLPILGN----LLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFE   76 (463)
T ss_dssp             SSCSSSBTTTBT----HHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHH
T ss_pred             CcCCCCcCceeE----HHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccc
Confidence            789999999999    77766 48889999999999999999999999999999999999999887655555422222  


Q ss_pred             --hhhhhCCcccccCCccHHhhhcccCccCcHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHH
Q 009087          144 --SEFLFGSGFAIAEGPLWMGRRRAVAPSLHKK-YLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (544)
Q Consensus       144 --~~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~-~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~  220 (544)
                        .....+.+++..+|+.|+.+|+++.+.|+.. .+ .+. +.+.++++.+++.|.+....++.+|+.++++.+++|+++
T Consensus        77 ~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~-~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~  154 (463)
T PF00067_consen   77 IFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLE-PLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIG  154 (463)
T ss_dssp             HHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHH-HHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-ccc-cccccccccccccccccccccceeeeecccccccccccc
Confidence              2245678899999999999999999999988 55 676 899999999999999877666689999999999999999


Q ss_pred             HhhccccCCCCCCCC--hHHHHHHHHHHHHHHhccCchhhhHHHHhhhch-hhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009087          221 LSVFNYNFDSLTADS--PVIDAVYTALKEAELRSTDVLPYWKAALCKIVP-RQIKAEKAVTVIRKTVEELIIKCKEIVET  297 (544)
Q Consensus       221 ~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  297 (544)
                      .++||.++++++...  ...+.+........... ..+....+++..+.. ..+...++.+.+.+++.+.++++++....
T Consensus       155 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  155 RVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFF-WNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHH-HHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             cccccceeeecccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999987543221  12222222222111000 001111122222222 23444556678888888888888776554


Q ss_pred             hccccccccccCCCChhHHHHHHhcc------cCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHH
Q 009087          298 EGERIDDEEYVNDSDPSILRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEI  371 (544)
Q Consensus       298 ~~~~~~~~~~~~~~~~~ll~~ll~~~------~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei  371 (544)
                      .          .....|+++.++...      .+++++++.++++.+++||+|||+.+++|++++|++||++|+|+++||
T Consensus       234 ~----------~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei  303 (463)
T PF00067_consen  234 G----------DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEI  303 (463)
T ss_dssp             S----------SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             c----------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3          134567899888765      268999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCC-CCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCCC
Q 009087          372 DRVLQGR-SPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEF  450 (544)
Q Consensus       372 ~~~~~~~-~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F  450 (544)
                      ++++++. .++.+++.+||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|
T Consensus       304 ~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F  383 (463)
T PF00067_consen  304 DSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEF  383 (463)
T ss_dssp             HHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS-
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999653 589999999999999999999999999977778888899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccc--eeEecCCCeeE
Q 009087          451 LPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTG--ATIHTTNGLYM  528 (544)
Q Consensus       451 ~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~~~v  528 (544)
                      +||||+.+..  ........++|||.|+|.|+|++||++|+++++|.||++|||+++++........  ....++.++.|
T Consensus       384 ~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (463)
T PF00067_consen  384 DPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKV  461 (463)
T ss_dssp             -TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEE
T ss_pred             cccccccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEE
Confidence            9999986532  1234667899999999999999999999999999999999999987655443322  34566666777


Q ss_pred             EE
Q 009087          529 KL  530 (544)
Q Consensus       529 ~~  530 (544)
                      .|
T Consensus       462 ~~  463 (463)
T PF00067_consen  462 KF  463 (463)
T ss_dssp             EE
T ss_pred             eC
Confidence            64


No 21 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=6.4e-69  Score=552.82  Aligned_cols=449  Identities=21%  Similarity=0.342  Sum_probs=342.1

Q ss_pred             ccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHHh
Q 009087           65 ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVS  144 (544)
Q Consensus        65 ~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  144 (544)
                      +.||||.++|++|+    +..+ ....+..+.+|+++||++|++++|+.++|+|+||+++++|+.+++..|.+++.....
T Consensus        36 ~~ppgp~~~Pl~G~----l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         36 PYPPGPKGLPIIGN----MLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             CCCcCCCCCCeecc----HHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            45899999999999    5433 334567899999999999999999999999999999999998766566665432222


Q ss_pred             hhhh---CCcccccCCccHHhhhcc-cCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHH
Q 009087          145 EFLF---GSGFAIAEGPLWMGRRRA-VAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (544)
Q Consensus       145 ~~~~---g~~l~~~~g~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~  220 (544)
                      ..+.   +.+++..+|+.|+++|++ +.++|+.+.++.+. ++. ++++.+++.+.+  ..++++|+.+++..+++|+++
T Consensus       111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~-~~~-~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~  186 (516)
T PLN02183        111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWA-SVR-DEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITY  186 (516)
T ss_pred             hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHH-HHH-HHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHH
Confidence            2222   356777889999999998 57999999998877 554 578888898864  346789999999999999999


Q ss_pred             HhhccccCCCCCCCChHHHHHHHHHHHHHH-hccCchhhhHHHHhhhch--hhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009087          221 LSVFNYNFDSLTADSPVIDAVYTALKEAEL-RSTDVLPYWKAALCKIVP--RQIKAEKAVTVIRKTVEELIIKCKEIVET  297 (544)
Q Consensus       221 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~l~~~~p--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  297 (544)
                      +++||.+++.  ..+++.+.+......... ....++|++    ..+.+  ...+..+..+.+.+++.++++++++..++
T Consensus       187 ~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (516)
T PLN02183        187 RAAFGSSSNE--GQDEFIKILQEFSKLFGAFNVADFIPWL----GWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKN  260 (516)
T ss_pred             hHhhcCcccc--hHHHHHHHHHHHHHHhCCccHHHhcchh----HhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999987653  122233333222221110 111233322    12211  23455566778888888888877654332


Q ss_pred             hccccccccccCCCChhHHHHHHhcc---------------cCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChH
Q 009087          298 EGERIDDEEYVNDSDPSILRFLLASR---------------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCN  362 (544)
Q Consensus       298 ~~~~~~~~~~~~~~~~~ll~~ll~~~---------------~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~  362 (544)
                      ..... ..   +....|+++.+++..               ..++++++.++++++++||+|||+++++|++++|++||+
T Consensus       261 ~~~~~-~~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pe  336 (516)
T PLN02183        261 QNADN-DS---EEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPE  336 (516)
T ss_pred             ccccc-cc---ccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHH
Confidence            21000 00   112357888888631               137899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC-CCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCC
Q 009087          363 SLMKAQEEIDRVLQ-GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSS  441 (544)
Q Consensus       363 ~~~klr~Ei~~~~~-~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~  441 (544)
                      +|+|+++||+++++ ++.++.+++++||||+|||+|||||+|++|... |.+.+|++++||.|||||.|.++.+++||||
T Consensus       337 vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~  415 (516)
T PLN02183        337 DLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDK  415 (516)
T ss_pred             HHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCc
Confidence            99999999999998 446899999999999999999999999999876 5667888889999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCC---ccccc--
Q 009087          442 QVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQN---INMTT--  516 (544)
Q Consensus       442 ~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~--  516 (544)
                      ++|+||++|+||||+.++.. ........++|||.|+|.|+|++||++|+++++|+|+++|+|++.++..   +....  
T Consensus       416 ~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~  494 (516)
T PLN02183        416 NSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVF  494 (516)
T ss_pred             cccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcc
Confidence            99999999999999854211 1112446799999999999999999999999999999999999987643   32222  


Q ss_pred             ceeEecCCCeeEEEEEec
Q 009087          517 GATIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       517 ~~~~~~~~~~~v~~~~r~  534 (544)
                      +.+..+...+.+.+++|.
T Consensus       495 ~~~~~~~~~~~~~~~~r~  512 (516)
T PLN02183        495 GLTAPRATRLVAVPTYRL  512 (516)
T ss_pred             ccccccCCCcEEEeecCC
Confidence            444344556777777773


No 22 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.5e-68  Score=548.55  Aligned_cols=464  Identities=20%  Similarity=0.322  Sum_probs=357.2

Q ss_pred             hhHHhhhhhcccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCC
Q 009087           55 WLTSLTKSLTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTK  134 (544)
Q Consensus        55 ~~~~l~~~~~~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~  134 (544)
                      |+..-.+...+.||||.++|++|+    +..+ ...++..+.+|+++||++|++++|+.++++++||+++++|+.+++..
T Consensus        22 ~~~~~~~~~~~~ppgp~~~pl~G~----~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~   96 (514)
T PLN03112         22 WLNASMRKSLRLPPGPPRWPIVGN----LLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDV   96 (514)
T ss_pred             HccccccCCCCCccCCCCCCeeee----HHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcc
Confidence            344334444456899999999999    5444 34578899999999999999999988999999999999999876667


Q ss_pred             CCCchhhHHh-hhhhC--CcccccCCccHHhhhccc-CccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHH
Q 009087          135 YAKGLVSEVS-EFLFG--SGFAIAEGPLWMGRRRAV-APSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEK  210 (544)
Q Consensus       135 ~~~~~~~~~~-~~~~g--~~l~~~~g~~w~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~  210 (544)
                      |.+++..... ...+|  .+++..+|+.|+.+|+++ .+.|+.+.++.+. +.+.+.++.+++.+.+....++++|+.+.
T Consensus        97 f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~-~~~~~~~~~lv~~l~~~~~~~~~vd~~~~  175 (514)
T PLN03112         97 FASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFA-KHRAEEARHLIQDVWEAAQTGKPVNLREV  175 (514)
T ss_pred             cccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhh-HHHHHHHHHHHHHHHHhhccCCeeeHHHH
Confidence            7765432211 12233  334556899999999995 5689999999998 78888899999988765555678999999


Q ss_pred             HHHHHHHHHHHhhccccCCCCCCC-ChHHHHHHHHHHHHHHhc-----cCchhhhHHHHhhhch--hhHHHHHHHHHHHH
Q 009087          211 FSQLTLDVIGLSVFNYNFDSLTAD-SPVIDAVYTALKEAELRS-----TDVLPYWKAALCKIVP--RQIKAEKAVTVIRK  282 (544)
Q Consensus       211 ~~~~~~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~p~~~~~l~~~~p--~~~~~~~~~~~~~~  282 (544)
                      +..+++|+++.++||.++...... .+....+...........     ..++|.+    ..+.+  ..++..+..+.+.+
T Consensus       176 ~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~~  251 (514)
T PLN03112        176 LGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAW----RWLDPYGCEKKMREVEKRVDE  251 (514)
T ss_pred             HHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHH----HhcCcccHHHHHHHHHHHHHH
Confidence            999999999999999987543221 122233333333222111     1123322    12211  12444556777788


Q ss_pred             HHHHHHHHHHHHhhhhccccccccccCCCChhHHHHHHhccc-----CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 009087          283 TVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLL  357 (544)
Q Consensus       283 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-----~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L  357 (544)
                      ++++.++++++..+....        .....|+++.++++.+     .++++++.++++.+++||+|||+++|+|++++|
T Consensus       252 ~~~~~i~~~~~~~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L  323 (514)
T PLN03112        252 FHDKIIDEHRRARSGKLP--------GGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEV  323 (514)
T ss_pred             HHHHHHHHHHHhhccccc--------CCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence            888888876654321100        1223579999987422     378999999999999999999999999999999


Q ss_pred             hhChHHHHHHHHHHHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEeccc
Q 009087          358 SKDCNSLMKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYN  436 (544)
Q Consensus       358 ~~~P~~~~klr~Ei~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~  436 (544)
                      ++||++|+|+|+||++++++ +.++.+++++|||++|||+||||++|+++...+|.+.+|++++|+.|||||.|.++.++
T Consensus       324 ~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~  403 (514)
T PLN03112        324 IKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHG  403 (514)
T ss_pred             HhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHH
Confidence            99999999999999999885 45899999999999999999999999999877788888999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC---C
Q 009087          437 IHHSSQVWERAEEFLPERFDLEGPMPNE--SNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ---N  511 (544)
Q Consensus       437 ~~~d~~~~~dp~~F~P~Rfl~~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~  511 (544)
                      +||||++|+||++|+||||..+......  ......++|||+|+|.|+|++||++|+++++++||++|+|++.++.   +
T Consensus       404 ~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~  483 (514)
T PLN03112        404 LGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPED  483 (514)
T ss_pred             hhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCccc
Confidence            9999999999999999998643211011  1234579999999999999999999999999999999999987543   3


Q ss_pred             cccc--cceeEecCCCeeEEEEEecCC
Q 009087          512 INMT--TGATIHTTNGLYMKLRQRQHL  536 (544)
Q Consensus       512 ~~~~--~~~~~~~~~~~~v~~~~r~~~  536 (544)
                      +.+.  .+.+..+++++.+++.+|...
T Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~r~~~  510 (514)
T PLN03112        484 IDTQEVYGMTMPKAKPLRAVATPRLAP  510 (514)
T ss_pred             CCCccccCcccccCCCeEEEeecCCcc
Confidence            4332  245556788999999999643


No 23 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.5e-67  Score=540.12  Aligned_cols=457  Identities=18%  Similarity=0.249  Sum_probs=343.7

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhccch-HHHHHHHHHh-CCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHH
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGALF-LPLFKWMNVY-GPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEV  143 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~~~-~~l~~~~~ky-G~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~  143 (544)
                      .||||.++|++|+    +..+..+.++ ..+.++.++| |+||++++|++++|+|+||++++++|.+++..|.+++....
T Consensus        41 ~PPgp~~~P~iGn----l~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         41 LPPGPPGWPILGN----LPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCcCCCCCCeecc----HHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            5889999999999    6665443332 3466667776 79999999999999999999999999887767877654333


Q ss_pred             hhhhhC--Cccccc-CCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHH
Q 009087          144 SEFLFG--SGFAIA-EGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (544)
Q Consensus       144 ~~~~~g--~~l~~~-~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~  220 (544)
                      ...+.+  .++++. +|+.|+++|+++++.|.......+.+.+...+++.+++.+.+....++++|+.+.+..+++|+++
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  196 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM  196 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence            332322  245555 59999999999999886655555554666677889999998655455679999999999999999


Q ss_pred             HhhccccCCCCCC----CChHHHHHHHHHHHHHH---hccCchh--hhHHHHhhh--chhhHHHHHHHHHHHHHHHHHHH
Q 009087          221 LSVFNYNFDSLTA----DSPVIDAVYTALKEAEL---RSTDVLP--YWKAALCKI--VPRQIKAEKAVTVIRKTVEELII  289 (544)
Q Consensus       221 ~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~p--~~~~~l~~~--~p~~~~~~~~~~~~~~~~~~~i~  289 (544)
                      +++||.+++..+.    +.+....+.........   ......+  .+.+++..+  .....+.......+.++++++++
T Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999998864321    12222222211111111   1101111  011122211  11122333455677888888888


Q ss_pred             HHHHHhhhhccccccccccCCCChhHHHHHHhccc-----CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHH
Q 009087          290 KCKEIVETEGERIDDEEYVNDSDPSILRFLLASRE-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSL  364 (544)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~-----~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~  364 (544)
                      ++++..++...        .....|+++.+++..+     .++++++.++++++++||+|||+++++|++++|+.||++|
T Consensus       277 ~~~~~~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q  348 (534)
T PLN03018        277 ERVELWREKGG--------KAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEIL  348 (534)
T ss_pred             HHHHHhhhccC--------CCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHH
Confidence            87654322110        1123578998886432     2899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCC
Q 009087          365 MKAQEEIDRVLQG-RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQV  443 (544)
Q Consensus       365 ~klr~Ei~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~  443 (544)
                      +|+++||++++++ +.++.+++.+||||+|||+|+||++|++|...+|.+.+|+.++||.||||+.|+++.+++||||++
T Consensus       349 ~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~  428 (534)
T PLN03018        349 RKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKI  428 (534)
T ss_pred             HHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCccc
Confidence            9999999999974 458999999999999999999999999998888989999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC---CCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC-Ccccc-cce
Q 009087          444 WERAEEFLPERFDLEGPMPNE---SNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-NINMT-TGA  518 (544)
Q Consensus       444 ~~dp~~F~P~Rfl~~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~-~~~  518 (544)
                      |+||++|+||||+++......   ......++|||+|+|.|+|++||.+|+++++|+|+++|+|++.++. ++... ...
T Consensus       429 ~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  508 (534)
T PLN03018        429 WKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDA  508 (534)
T ss_pred             CCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccc
Confidence            999999999999854211000   1244679999999999999999999999999999999999988653 43332 223


Q ss_pred             eEecCCCeeEEEEEec
Q 009087          519 TIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       519 ~~~~~~~~~v~~~~r~  534 (544)
                      +...+.++.|++++|.
T Consensus       509 ~~~~p~~~~v~~~~R~  524 (534)
T PLN03018        509 SLLMAKPLLLSVEPRL  524 (534)
T ss_pred             ceecCCCeEEEEEecc
Confidence            4455689999999994


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=8.1e-68  Score=537.27  Aligned_cols=422  Identities=22%  Similarity=0.325  Sum_probs=339.7

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHHhh
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSE  145 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  145 (544)
                      .||||.++|++|+    +..++.++++..+.+++++||++|++++|+.++|+++||+++++|+.+++..+ +........
T Consensus        36 ~Ppgp~~~P~iG~----~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~-~~~~~~~~~  110 (463)
T PLN02196         36 LPPGTMGWPYVGE----TFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLF-KPTFPASKE  110 (463)
T ss_pred             CCCCCCCCCccch----HHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcc-cccCchHHH
Confidence            4889999999999    66666778899999999999999999999999999999999999998765545 322222233


Q ss_pred             hhhC-CcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHhhc
Q 009087          146 FLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSVF  224 (544)
Q Consensus       146 ~~~g-~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~f  224 (544)
                      ..+| .+++..+|+.|+++|+++++.|+.++++.+. +.+.++++++++.+.     ++++|+.+++..+++++++.++|
T Consensus       111 ~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~-~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        111 RMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMV-PDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             HHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHH-HHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHHc
Confidence            3445 4788889999999999999999999999988 788888888887763     35799999999999999999999


Q ss_pred             cccCCCCCCCChHHHHHHHHHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 009087          225 NYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERIDD  304 (544)
Q Consensus       225 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  304 (544)
                      |.+...      ....+........ .....+|++.+     ....++..++.+.+.+++.+.++++++.          
T Consensus       185 G~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~p-----~~~~~~~~~a~~~~~~~~~~~i~~~~~~----------  242 (463)
T PLN02196        185 GKDEVL------YREDLKRCYYILE-KGYNSMPINLP-----GTLFHKSMKARKELAQILAKILSKRRQN----------  242 (463)
T ss_pred             CCCCch------HHHHHHHHHHHHh-cchhcccccCC-----CccchHHHHHHHHHHHHHHHHHHHHhhc----------
Confidence            987421      1111211111111 11111221100     0112445567777888888887766432          


Q ss_pred             ccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhCC----CCC
Q 009087          305 EEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQG----RSP  380 (544)
Q Consensus       305 ~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~~----~~~  380 (544)
                          .....|+++.+++..++++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.    +.+
T Consensus       243 ----~~~~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~  318 (463)
T PLN02196        243 ----GSSHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESL  318 (463)
T ss_pred             ----CCCcccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCC
Confidence                112357888888765679999999999999999999999999999999999999999999999998863    357


Q ss_pred             ChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCCCCCCCCCCCCC
Q 009087          381 SFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGP  460 (544)
Q Consensus       381 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~  460 (544)
                      +.++++++|||+|||+|+||++|+++... |.+.+|+.++||.||||+.|+++.+++||||++|+||++|+||||+.+. 
T Consensus       319 ~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-  396 (463)
T PLN02196        319 TWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-  396 (463)
T ss_pred             CHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-
Confidence            99999999999999999999999998877 5566788889999999999999999999999999999999999998431 


Q ss_pred             CCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEEEEEe
Q 009087          461 MPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQR  533 (544)
Q Consensus       461 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (544)
                            ....++|||.|+|.|+|+++|++|++++++.|+++|+|++.+++. ......+..|+++++|++++.
T Consensus       397 ------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        397 ------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-GIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             ------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ceEEcccccCCCCceEEEecC
Confidence                  345799999999999999999999999999999999999986532 334444667999999998764


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.4e-67  Score=531.14  Aligned_cols=434  Identities=18%  Similarity=0.248  Sum_probs=336.6

Q ss_pred             cccCCCCCCCCccCCCcccHHHhh----hccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCch
Q 009087           64 TITQSDESNIPVASAKLDDVTDLL----GGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGL  139 (544)
Q Consensus        64 ~~~~pgp~~lP~~g~~~~~~~~~~----~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~  139 (544)
                      .++||||.++|++|+    +..+.    ...++.++.+|+++||+||++++|+.+.|+++||++++++|.+++..+..+.
T Consensus         6 ~~~Ppg~~~~P~iG~----~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          6 SRLPKGSLGWPVIGE----TLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCchhh----HHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            346889999999999    55543    2357888999999999999999999999999999999999988766565432


Q ss_pred             hhHHhhhhhC-CcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHH
Q 009087          140 VSEVSEFLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDV  218 (544)
Q Consensus       140 ~~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dv  218 (544)
                      . .....++| .+++..+|+.|+++|+++++.|+...+.......+.+.++++++.+    ..++++|+.+.+..+++++
T Consensus        82 ~-~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         82 P-KSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSW----RDDPPVLVQDETKKIAFEV  156 (452)
T ss_pred             c-hhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCEEhHHHHHHHHHHH
Confidence            1 22334455 4688889999999999999999887776543245555555555443    2456899999999999999


Q ss_pred             HHHhhccccCCCCCCCChHHHHHHHHHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009087          219 IGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETE  298 (544)
Q Consensus       219 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  298 (544)
                      +++++||.+.+.      ....+...+....... ..+|.+.+     .+...+..++.+.+.+++...++++++..+..
T Consensus       157 i~~~~~G~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~p-----~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  224 (452)
T PLN03141        157 LVKALISLEPGE------EMEFLKKEFQEFIKGL-MSLPIKLP-----GTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNK  224 (452)
T ss_pred             HHHHHcCCCchH------HHHHHHHHHHHHhhhH-HhCccCCC-----chHhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999976531      1122222222111110 01111100     01123344567888889999998887654321


Q ss_pred             ccccccccccCCCChhHHHHHHhccc-CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhC-
Q 009087          299 GERIDDEEYVNDSDPSILRFLLASRE-EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQ-  376 (544)
Q Consensus       299 ~~~~~~~~~~~~~~~~ll~~ll~~~~-~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~-  376 (544)
                      .+.   .   .....|+++.+++..+ .++++++.++++++++||+|||+++++|++++|++||++|+|+++||+++++ 
T Consensus       225 ~~~---~---~~~~~d~l~~ll~~~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~  298 (452)
T PLN03141        225 EED---E---TGIPKDVVDVLLRDGSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRL  298 (452)
T ss_pred             Ccc---c---cCChhhHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhc
Confidence            100   0   0123578998887643 5899999999999999999999999999999999999999999999998863 


Q ss_pred             ----CCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCCCCC
Q 009087          377 ----GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLP  452 (544)
Q Consensus       377 ----~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~P  452 (544)
                          ++.++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|
T Consensus       299 ~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~P  377 (452)
T PLN03141        299 KADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNP  377 (452)
T ss_pred             cCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCc
Confidence                33578999999999999999999999998754 5777889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEEEEE
Q 009087          453 ERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQ  532 (544)
Q Consensus       453 ~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (544)
                      |||+++.      .....++|||+|+|.|+|++||.+|+++++|+|+++|+|++.++....   ..+..|..++.|++++
T Consensus       378 eRfl~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~~  448 (452)
T PLN03141        378 WRWQEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIVN---FPTVRMKRKLPIWVTR  448 (452)
T ss_pred             ccccCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCeee---cccccCCCCceEEEEe
Confidence            9998541      134679999999999999999999999999999999999987664332   2477889999999999


Q ss_pred             ec
Q 009087          533 RQ  534 (544)
Q Consensus       533 r~  534 (544)
                      |.
T Consensus       449 ~~  450 (452)
T PLN03141        449 ID  450 (452)
T ss_pred             CC
Confidence            94


No 26 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-65  Score=523.58  Aligned_cols=445  Identities=23%  Similarity=0.340  Sum_probs=345.1

Q ss_pred             CCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhC-CeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhh-HHh
Q 009087           67 QSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYG-PIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVS-EVS  144 (544)
Q Consensus        67 ~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG-~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~-~~~  144 (544)
                      ..+..+-++.|+    ....+. +.+..+..+.++++ .+++++..+.  ++++||+.+++|+..+...|.++... ...
T Consensus        43 ~~~~~~~~~~g~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~  115 (502)
T PLN02426         43 NCEVCRAYLTAS----WAKDFD-NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAIL  115 (502)
T ss_pred             cCCCCCCCccHH----HHHhcc-cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHH
Confidence            334445556666    333222 34666667888887 5888876553  89999999999998765567776533 444


Q ss_pred             hhhhCCcccccCCccHHhhhcccCccCcHHHHHHHH-HHHHHHHHHHHHHHHHhhhcC--CceeeHHHHHHHHHHHHHHH
Q 009087          145 EFLFGSGFAIAEGPLWMGRRRAVAPSLHKKYLSVIV-DCVFCKCAERLVERLQTDALN--GTAVNMEEKFSQLTLDVIGL  221 (544)
Q Consensus       145 ~~~~g~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~-~~~~~~~~~~l~~~l~~~~~~--~~~vdl~~~~~~~~~dvi~~  221 (544)
                      ..++|+|++..+|+.|+++|+++++.|+.+.++.+. +.++.++++.+++.+.+....  ++++|+.++++.+++|+|+.
T Consensus       116 ~~~~g~gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~  195 (502)
T PLN02426        116 GDLLGRGIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICK  195 (502)
T ss_pred             HHhcCCceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999888763 367778888899888765432  46799999999999999999


Q ss_pred             hhccccCCCCCCC---ChHHHHHHHHHHHHHHhccCchhhhHHHHhhh-chhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009087          222 SVFNYNFDSLTAD---SPVIDAVYTALKEAELRSTDVLPYWKAALCKI-VPRQIKAEKAVTVIRKTVEELIIKCKEIVET  297 (544)
Q Consensus       222 ~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  297 (544)
                      ++||.++++++.+   +++..++..............+|+...+...+ .+..++..++.+.+.+++.++|+++++..  
T Consensus       196 ~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~--  273 (502)
T PLN02426        196 FSFGLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG--  273 (502)
T ss_pred             HHhCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            9999999876532   23444444333222222222233221111111 23345566778888888888888876531  


Q ss_pred             hccccccccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhCC
Q 009087          298 EGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQG  377 (544)
Q Consensus       298 ~~~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~~  377 (544)
                                 .....|+++.+++..  .+++++.++++++++||+|||+++|+|++|+|++||++|+|+|+||++++++
T Consensus       274 -----------~~~~~dll~~ll~~~--~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~  340 (502)
T PLN02426        274 -----------FSASKDLLSRFMASI--NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP  340 (502)
T ss_pred             -----------cCCcchHHHHHHhcC--CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC
Confidence                       112358999998764  3788999999999999999999999999999999999999999999999874


Q ss_pred             C--CCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCC-CCCCCCCCCC
Q 009087          378 R--SPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW-ERAEEFLPER  454 (544)
Q Consensus       378 ~--~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R  454 (544)
                      .  .++++++++||||+|||+|+||++|++|...|++..++++++|+.||+||.|.++.+++||||++| +||++|+|||
T Consensus       341 ~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeR  420 (502)
T PLN02426        341 NQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPER  420 (502)
T ss_pred             CCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccc
Confidence            3  589999999999999999999999999988766666666679999999999999999999999999 8999999999


Q ss_pred             CCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC--CcccccceeEecCCCeeEEEEE
Q 009087          455 FDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ--NINMTTGATIHTTNGLYMKLRQ  532 (544)
Q Consensus       455 fl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~  532 (544)
                      |++++..  .......++|||+|+|.|+|++||++|++++++.|+++|+|++.++.  ......+.+..+++|+.|++++
T Consensus       421 wl~~~~~--~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~  498 (502)
T PLN02426        421 WLKNGVF--VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRE  498 (502)
T ss_pred             cCCCCCc--CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEE
Confidence            9864211  12234578999999999999999999999999999999999987442  2345567889999999999999


Q ss_pred             ecC
Q 009087          533 RQH  535 (544)
Q Consensus       533 r~~  535 (544)
                      |..
T Consensus       499 r~~  501 (502)
T PLN02426        499 RVR  501 (502)
T ss_pred             ccC
Confidence            853


No 27 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.2e-66  Score=529.16  Aligned_cols=422  Identities=16%  Similarity=0.215  Sum_probs=329.7

Q ss_pred             cCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhHHhh
Q 009087           66 TQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSEVSE  145 (544)
Q Consensus        66 ~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  145 (544)
                      .||||.++|++|+    +..+. ++.+..+.+++++||++|++++|++++++|+||+++++++.+++..+.++.......
T Consensus        32 ~ppgp~~~P~~G~----~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         32 LPPGTMGWPLFGE----TTEFL-KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             CCCCCCCCCchhh----HHHHH-HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            5789999999999    55443 345678999999999999999999999999999999999987665554433222222


Q ss_pred             hhhC-CcccccCCccHHhhhcccCccCcHHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHhh
Q 009087          146 FLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSV-IVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSV  223 (544)
Q Consensus       146 ~~~g-~~l~~~~g~~w~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~  223 (544)
                       ++| .+++..+|+.|+.+|+++++.|+...++. +. +.+.+.++++++++.    .++++|+.+.+..+++++++.++
T Consensus       107 -~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~  180 (463)
T PLN02774        107 -ILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLL-PKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALKQI  180 (463)
T ss_pred             -HhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHHHH
Confidence             344 46777899999999999999999988875 55 677777777777663    24579999999999999999999


Q ss_pred             ccccCCCCCCCChHHHHHHHHHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 009087          224 FNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERID  303 (544)
Q Consensus       224 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  303 (544)
                      ||.+.+.      ....+...+...... ...++.+.+     .+...+..++.+.+.+++.+.++++++.         
T Consensus       181 ~g~~~~~------~~~~~~~~~~~~~~~-~~~~~~~lp-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------  239 (463)
T PLN02774        181 AGTLSKP------ISEEFKTEFFKLVLG-TLSLPIDLP-----GTNYRSGVQARKNIVRMLRQLIQERRAS---------  239 (463)
T ss_pred             cCCCChH------HHHHHHHHHHHHhcc-cccCCcCCC-----ChhhhHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence            9975421      111122211111110 111111100     0113344566777888888888776532         


Q ss_pred             cccccCCCChhHHHHHHhccc---CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhCC---
Q 009087          304 DEEYVNDSDPSILRFLLASRE---EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQG---  377 (544)
Q Consensus       304 ~~~~~~~~~~~ll~~ll~~~~---~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~~---  377 (544)
                           .....|+++.+++..+   .++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++++.   
T Consensus       240 -----~~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~  314 (463)
T PLN02774        240 -----GETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRP  314 (463)
T ss_pred             -----CCCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCC
Confidence                 1123579998886433   37999999999999999999999999999999999999999999999999863   


Q ss_pred             -CCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCCCCCCCCC
Q 009087          378 -RSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFD  456 (544)
Q Consensus       378 -~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl  456 (544)
                       ..++++++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+
T Consensus       315 ~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl  393 (463)
T PLN02774        315 EDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWL  393 (463)
T ss_pred             CCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcC
Confidence             3579999999999999999999999999865 47777888899999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEEEEE
Q 009087          457 LEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQ  532 (544)
Q Consensus       457 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  532 (544)
                      ++..     .....++|||+|+|.|+|++||++|++++++.|+++|+|++.++.+....  .+..|++|++|++++
T Consensus       394 ~~~~-----~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~~--~~~~p~~g~~~~~~~  462 (463)
T PLN02774        394 DKSL-----ESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMKF--PRVEAPNGLHIRVSP  462 (463)
T ss_pred             CCCc-----CCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccccC--CCCCCCCCceEEeee
Confidence            5421     11235999999999999999999999999999999999999876553322  244588999999874


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.5e-66  Score=523.27  Aligned_cols=431  Identities=18%  Similarity=0.261  Sum_probs=334.6

Q ss_pred             ccCCCCCCCCccCCCcccHHHhhh----ccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchh
Q 009087           65 ITQSDESNIPVASAKLDDVTDLLG----GALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLV  140 (544)
Q Consensus        65 ~~~pgp~~lP~~g~~~~~~~~~~~----~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~  140 (544)
                      +.||||.++|++|+    +..+..    .+++..+.+++++||++|++++|++++++|+||+++++++.+++..|.++..
T Consensus        30 ~lppgp~~~P~iG~----~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         30 RLPPGSLGLPLVGE----TLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             CCcCCCcCCCchhh----HHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            46889999999999    655532    4578889999999999999999999999999999999999887666655432


Q ss_pred             hHHhhhhhC-CcccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHH
Q 009087          141 SEVSEFLFG-SGFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVI  219 (544)
Q Consensus       141 ~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi  219 (544)
                      .... .++| ++++.++|+.|+++|+++.+.++.+.+..+....+.+.++..++.+      ++++|+.+.+..++++++
T Consensus       106 ~~~~-~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~t~~vi  178 (472)
T PLN02987        106 GSIS-NLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSW------SSRVLLMEEAKKITFELT  178 (472)
T ss_pred             HHHH-HHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhh------ccceehHHHHHHHHHHHH
Confidence            2222 3334 6788889999999999987644444554433111222222222222      246999999999999999


Q ss_pred             HHhhccccCCCCCCCChHHHHHHHHHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009087          220 GLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEG  299 (544)
Q Consensus       220 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  299 (544)
                      ++++||.+.+..  .+.+...+.......   ....+|++       .+..++..++.+.+.+++.++++++++....+ 
T Consensus       179 ~~~~fg~~~~~~--~~~~~~~~~~~~~~~---~~~~~p~l-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-  245 (472)
T PLN02987        179 VKQLMSFDPGEW--TESLRKEYVLVIEGF---FSVPLPLF-------STTYRRAIQARTKVAEALTLVVMKRRKEEEEG-  245 (472)
T ss_pred             HHHHcCCCChHH--HHHHHHHHHHHHhhh---hcCCCcCC-------CchHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-
Confidence            999999765321  111222222211111   11223322       23355666788888999999998876543221 


Q ss_pred             cccccccccCCCChhHHHHHHhcccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhC---
Q 009087          300 ERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQ---  376 (544)
Q Consensus       300 ~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~---  376 (544)
                               .....|+++.+++..++++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+   
T Consensus       246 ---------~~~~~d~l~~ll~~~~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~  316 (472)
T PLN02987        246 ---------AEKKKDMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS  316 (472)
T ss_pred             ---------CcccccHHHHHHhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC
Confidence                     12245899999987777999999999999999999999999999999999999999999999999875   


Q ss_pred             -CCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCCCCCCCC
Q 009087          377 -GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERF  455 (544)
Q Consensus       377 -~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rf  455 (544)
                       +..++.+++.+|||++||++|+||++|+++.. .|.+.+|++++||.||+|+.|+++.+++|+||++|+||++|+||||
T Consensus       317 ~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRf  395 (472)
T PLN02987        317 DSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRW  395 (472)
T ss_pred             CCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccC
Confidence             23478999999999999999999999998754 5777788999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEEEEEec
Q 009087          456 DLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQRQ  534 (544)
Q Consensus       456 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  534 (544)
                      +++..   .......++|||+|+|.|+|++||.+|++++++.|+++|+|++.++.++..  +.+..|.+++.+++++|.
T Consensus       396 l~~~~---~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        396 QSNSG---TTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF--FPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCCCC---CCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee--cccccCCCCceEEEEecc
Confidence            85421   112346799999999999999999999999999999999999987766544  447889999999999985


No 29 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=4.1e-65  Score=524.45  Aligned_cols=431  Identities=19%  Similarity=0.289  Sum_probs=335.1

Q ss_pred             ccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCC--eEEEecCCceEEEEcChHHHHHHHhhcCCCCCCchhhH
Q 009087           65 ITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGP--IYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKGLVSE  142 (544)
Q Consensus        65 ~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~--i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  142 (544)
                      ++||||.++|++|+.+..+.....+.++..+.+++++||+  ||++++|+.+.|+++||+++++|+++++ .|.++....
T Consensus        42 ~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~~~~  120 (490)
T PLN02302         42 PLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGWPES  120 (490)
T ss_pred             CCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCCchh
Confidence            4689999999999933222212245788899999999997  7999999999999999999999998753 454443222


Q ss_pred             HhhhhhC-CcccccCCccHHhhhcccCccCc-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHH
Q 009087          143 VSEFLFG-SGFAIAEGPLWMGRRRAVAPSLH-KKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIG  220 (544)
Q Consensus       143 ~~~~~~g-~~l~~~~g~~w~~~R~~~~~~f~-~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~  220 (544)
                      ... ++| .++...+|+.|+++|+++++.|+ .+.++.+. +.+.++++.+++.+..    ++.+|+.+.+..+++++++
T Consensus       121 ~~~-~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~-~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~~vi~  194 (490)
T PLN02302        121 TVE-LIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYI-PYIEENVKSCLEKWSK----MGEIEFLTELRKLTFKIIM  194 (490)
T ss_pred             HHH-HhccccccccCcHHHHHHHHHHHhccCCHHHHHHHH-HHHHHHHHHHHHHhcC----CCCEehHHHHHHHHHHHHH
Confidence            222 344 44566789999999999999995 67888888 7888888888888743    3469999999999999999


Q ss_pred             HhhccccCCCCCCCChHHHHHHHHHHHHHHhc---cCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009087          221 LSVFNYNFDSLTADSPVIDAVYTALKEAELRS---TDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVET  297 (544)
Q Consensus       221 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  297 (544)
                      +++||.+++..      .+.+...........   ...+|.         ....+..++.+.+.+++.+.++++++..+.
T Consensus       195 ~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  259 (490)
T PLN02302        195 YIFLSSESELV------MEALEREYTTLNYGVRAMAINLPG---------FAYHRALKARKKLVALFQSIVDERRNSRKQ  259 (490)
T ss_pred             HHHcCCCChHH------HHHHHHHHHHHHHHhhhCCcCCCc---------hhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999875421      111111111111000   001111         112334456677888888888877654321


Q ss_pred             hccccccccccCCCChhHHHHHHhccc----CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 009087          298 EGERIDDEEYVNDSDPSILRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDR  373 (544)
Q Consensus       298 ~~~~~~~~~~~~~~~~~ll~~ll~~~~----~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~  373 (544)
                      ..         .....|+++.+++..+    +++++++.++++.+++||+|||+++++|++++|++||++|+|+|+|+++
T Consensus       260 ~~---------~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~  330 (490)
T PLN02302        260 NI---------SPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEE  330 (490)
T ss_pred             cC---------CCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            11         1234578999886532    4789999999999999999999999999999999999999999999999


Q ss_pred             HhCCC-----CCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCC
Q 009087          374 VLQGR-----SPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAE  448 (544)
Q Consensus       374 ~~~~~-----~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~  448 (544)
                      ++++.     .++++++++||||+|||+|+||++|+++... |.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus       331 v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~-R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  409 (490)
T PLN02302        331 IAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVF-REAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPK  409 (490)
T ss_pred             HHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccch-hcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCcc
Confidence            98642     2689999999999999999999999998865 55677899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCC-CcccccceeEecCCCee
Q 009087          449 EFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQ-NINMTTGATIHTTNGLY  527 (544)
Q Consensus       449 ~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~  527 (544)
                      +|+||||+++.      .....++|||+|+|.|+|++||.+|++++++.|+++|+|++.++. ++.+  .....|.+++.
T Consensus       410 ~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~--~~~~~p~~~~~  481 (490)
T PLN02302        410 EFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVMY--LPHPRPKDNCL  481 (490)
T ss_pred             ccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCccee--CCCCCCCCCce
Confidence            99999998542      234579999999999999999999999999999999999998542 3332  23478889999


Q ss_pred             EEEEEecC
Q 009087          528 MKLRQRQH  535 (544)
Q Consensus       528 v~~~~r~~  535 (544)
                      +++++|..
T Consensus       482 ~~~~~~~~  489 (490)
T PLN02302        482 ARITKVAS  489 (490)
T ss_pred             EEEEeccC
Confidence            99999864


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.3e-58  Score=424.58  Aligned_cols=438  Identities=20%  Similarity=0.335  Sum_probs=336.4

Q ss_pred             CCCCC-CCCccCCCcccHHHhhhccchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhcCCCCCCc-hhhHHh
Q 009087           67 QSDES-NIPVASAKLDDVTDLLGGALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTKYAKG-LVSEVS  144 (544)
Q Consensus        67 ~pgp~-~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~~~~~~~~-~~~~~~  144 (544)
                      ||-.. ++||+|+    ... +++++.+++.+..+|||+||++.++|+.+.++.+|+....+++......+-. ......
T Consensus        33 PPli~gwiP~lG~----a~~-fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   33 PPLIKGWIPWLGS----ALA-FGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CcccccCcchhhH----HHH-hccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            66444 4899998    443 5889999999999999999999999999999999999999997653333322 233556


Q ss_pred             hhhhCCccccc-CCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHhh
Q 009087          145 EFLFGSGFAIA-EGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSV  223 (544)
Q Consensus       145 ~~~~g~~l~~~-~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~  223 (544)
                      ...||.|+... ++....++.+++..++....++.+. +.+.++..+..+.  ....++....+........+.+.-...
T Consensus       108 ~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~-e~m~~el~~~f~~--~~~~s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  108 TPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLV-ELMLEELHAYFET--SLGESGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             hhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHH-HHHHHHHHHHHhc--ccccccchhHhhhhhHHHhhhhHHHhh
Confidence            67788887653 5778888889999999999999888 5555555444443  112245566677777777777777777


Q ss_pred             ccccCCCCCCCC-hHHHHHHHHHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009087          224 FNYNFDSLTADS-PVIDAVYTALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERI  302 (544)
Q Consensus       224 fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  302 (544)
                      ||+.-+.++++. ..+.++.+.+    ......||.+.|     .+..++..++.+.+.+.+...+.++++..+      
T Consensus       185 ~~e~r~~~d~~~a~l~~dLd~~F----~~~d~~FP~~LP-----~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s------  249 (486)
T KOG0684|consen  185 GGEVRDQLDADVAKLYHDLDQGF----QPFDFLFPYNLP-----IPLLRRRDRARKKISKIFSKIILDRRASIS------  249 (486)
T ss_pred             hhhhhhhhcchHHHHHHHHhccc----cchHhhcccCCC-----cchhhhHHHHHHHHHHHHHHHHHHHHhccc------
Confidence            776655543331 2232332222    222233443211     234555557888888888888887776432      


Q ss_pred             ccccccCCCChhHHHHHHhc---ccCCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCC-
Q 009087          303 DDEEYVNDSDPSILRFLLAS---REEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQGR-  378 (544)
Q Consensus       303 ~~~~~~~~~~~~ll~~ll~~---~~~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~~~-  378 (544)
                             ..+.|+++.+++.   ..+.+++|+...++.+++||+.||+.|.+|++++|++|||+++.+++|+++++|.. 
T Consensus       250 -------~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~  322 (486)
T KOG0684|consen  250 -------KWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK  322 (486)
T ss_pred             -------cccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC
Confidence                   3456788888872   22689999999999999999999999999999999999999999999999999854 


Q ss_pred             -CCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccC---CeeeCCCCEEEEecccccCCCCCCCCCCCCCCCC
Q 009087          379 -SPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPG---NYKVNAGQDIMISVYNIHHSSQVWERAEEFLPER  454 (544)
Q Consensus       379 -~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~---g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R  454 (544)
                       ..+.+++++||.|++||+|||||+||.+.+.|.+..+-++.+   .|.||+|..|.+++..+|+||++|+||+.|+|+|
T Consensus       323 ~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dR  402 (486)
T KOG0684|consen  323 EKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDR  402 (486)
T ss_pred             CCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhh
Confidence             389999999999999999999999998888866555544444   4999999999999999999999999999999999


Q ss_pred             CCCCCCCC--CCCCCCcceeccCCCCCCCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccc-cceeEecCCCeeEEEE
Q 009087          455 FDLEGPMP--NESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAILLQNMNFELVPDQNINMT-TGATIHTTNGLYMKLR  531 (544)
Q Consensus       455 fl~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~  531 (544)
                      |+.++...  +...-++.++|||+|+|.|||+.||.+|++.++..+|+.||+++.+|.-...+ ..++..|.++++++.+
T Consensus       403 f~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK  482 (486)
T KOG0684|consen  403 FLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYK  482 (486)
T ss_pred             ccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEe
Confidence            99654332  12334456799999999999999999999999999999999999987433333 3457888999999999


Q ss_pred             Eec
Q 009087          532 QRQ  534 (544)
Q Consensus       532 ~r~  534 (544)
                      .|.
T Consensus       483 ~R~  485 (486)
T KOG0684|consen  483 RRP  485 (486)
T ss_pred             ecC
Confidence            885


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.8e-57  Score=453.75  Aligned_cols=406  Identities=14%  Similarity=0.181  Sum_probs=294.9

Q ss_pred             hcccCCCCCCCCccCCCcccHHHhhhccchHHHHHHHHHhCC-eEEEecCCceE-------EEEcChHHHHHHHhh----
Q 009087           63 LTITQSDESNIPVASAKLDDVTDLLGGALFLPLFKWMNVYGP-IYRLAAGPRNF-------VVVSDPAIAKHVLRN----  130 (544)
Q Consensus        63 ~~~~~pgp~~lP~~g~~~~~~~~~~~~~~~~~l~~~~~kyG~-i~~i~~g~~~~-------vvv~dp~~i~~il~~----  130 (544)
                      +-+.|||+.|+|++|+.+..+.+.+..++..++.+.++|||+ ||+++++|.+.       |+++||++++.+|.+    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            335599999999999966666656677778999999999999 99999988665       999999999999974    


Q ss_pred             cCCCCCCchhhHHhhhhhC-C---cccccCCccHHhhhcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee
Q 009087          131 YGTKYAKGLVSEVSEFLFG-S---GFAIAEGPLWMGRRRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVN  206 (544)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~g-~---~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd  206 (544)
                      ++..+.... ..... ++| +   +++..+|+.|+++|+++.+.|+ ..++.+. +.+.++++.+++.|......+.++|
T Consensus        95 ~~~~~~~~~-~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~-~~m~~~~~~~~~~w~~~~~~~~~vd  170 (480)
T PLN02648         95 KRDVFTGTY-MPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFI-PEFRAAFAELFDTWEAELAKKGKAE  170 (480)
T ss_pred             ccccceeee-ccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhhhh-hHHHHHHHHHHHHHHHHHhhCCCcc
Confidence            333333322 22233 556 4   6777889999999999999999 5777777 8899999999999965434556799


Q ss_pred             HHHHHHHHHHHHHHHhhccccCCCCCCCChHHHHHHHHHHHHHHhccCchhhhH----HHHhh----hchhh-HHHHHHH
Q 009087          207 MEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYTALKEAELRSTDVLPYWK----AALCK----IVPRQ-IKAEKAV  277 (544)
Q Consensus       207 l~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~l~~----~~p~~-~~~~~~~  277 (544)
                      +.+.+..+++|++++++||.+.+. +   ...+.+.........  ...+|.+.    ..+..    ..+.. .......
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~-~---~l~~~~~~~~~~~~~--~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  244 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSE-T---ALGSDGPALIQKWLA--LQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDY  244 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcch-h---hhccchhHHHHHHHH--HHhhHHHHcCchHHHHHHhhcccCCchhhhhccH
Confidence            999999999999999999987653 1   111111111111100  00011110    00000    00000 0000111


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhccccccccccCCCChhHHHHHHhcccCCChHHHHHHHHH-HHHhhhHHHHHHHHHHHHH
Q 009087          278 TVIRKTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASREEVSSVQLRDDLLS-MLVAGHETTGSVLTWTLYL  356 (544)
Q Consensus       278 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~l~~~ei~~~~~~-~~~aG~dtts~tl~~~l~~  356 (544)
                      +.+.+++++.+                        .++++...+  ++++++|+.++++. +.++|++||+++++|++++
T Consensus       245 ~~~~~~~~~~~------------------------~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~  298 (480)
T PLN02648        245 DKLYDFFRASA------------------------TEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKW  298 (480)
T ss_pred             HHHHHHHHHHH------------------------HHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            11111111111                        112222222  35899999999875 4466777888899999999


Q ss_pred             HhhChH-HHHHHHHHHHHHhC--CCCCChhhhcCChhhhHHHHhhhcCCCCCcccceeecccccccC----CeeeCCCCE
Q 009087          357 LSKDCN-SLMKAQEEIDRVLQ--GRSPSFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPG----NYKVNAGQD  429 (544)
Q Consensus       357 L~~~P~-~~~klr~Ei~~~~~--~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~----g~~Ip~G~~  429 (544)
                      |++||+ +|++|++||+.+++  ++.++.+++++||||++||+|+||++|+++...|++ .+|++++    ||.||||+.
T Consensus       299 L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a-~~d~~l~~~~~g~~IpkG~~  377 (480)
T PLN02648        299 VGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRA-REDFVIESHDAAFEIKKGEM  377 (480)
T ss_pred             HHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccccee-cCCEEEecCCceEEECCCCE
Confidence            999995 99999999999986  345899999999999999999999999999888775 4566664    899999999


Q ss_pred             EEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceec---------cCCCCCCCcchHHHHHHHHHHHHHHHh
Q 009087          430 IMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIP---------FSGGPRKCVGDQFALLEAIVALAILLQ  500 (544)
Q Consensus       430 v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~A~~e~~~~la~ll~  500 (544)
                      |+++.+.+||||++|+||++|||+||+++...     ....+++         ||+|+|.|+|++||++|+++++++|++
T Consensus       378 V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~  452 (480)
T PLN02648        378 LFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFL  452 (480)
T ss_pred             EEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999853211     1123344         467789999999999999999999999


Q ss_pred             cce-EEecCCC
Q 009087          501 NMN-FELVPDQ  510 (544)
Q Consensus       501 ~f~-~~~~~~~  510 (544)
                      +|+ |++.++.
T Consensus       453 ~f~~~~l~~~~  463 (480)
T PLN02648        453 RYDSFEIEVDT  463 (480)
T ss_pred             HhCEEeecCCc
Confidence            998 9987553


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.1e-52  Score=414.90  Aligned_cols=376  Identities=29%  Similarity=0.461  Sum_probs=298.7

Q ss_pred             chHHHHHHHHHhCCeEEEecCCce--EEEEcChHHHHHHHhhcCCCCCCch----hhHHhhhhhCCc-ccccCCccHHhh
Q 009087           91 LFLPLFKWMNVYGPIYRLAAGPRN--FVVVSDPAIAKHVLRNYGTKYAKGL----VSEVSEFLFGSG-FAIAEGPLWMGR  163 (544)
Q Consensus        91 ~~~~l~~~~~kyG~i~~i~~g~~~--~vvv~dp~~i~~il~~~~~~~~~~~----~~~~~~~~~g~~-l~~~~g~~w~~~  163 (544)
                      +......+.+.||.+++++..+..  .++++++++++++++++. .+.+..    .......++|.+ ++..||+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            445566788889998888765433  899999999999998763 222211    111133455655 788899999999


Q ss_pred             hcccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHhhccccCCCCCCCChHHHHHHH
Q 009087          164 RRAVAPSLHKKYLSVIVDCVFCKCAERLVERLQTDALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSLTADSPVIDAVYT  243 (544)
Q Consensus       164 R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~  243 (544)
                      |++++++|+++.++.+. +.+.+.++++++.+ .  .. +.+++.+.+..+++++|+ .+||.+.+...   ........
T Consensus       103 Rkl~~~~F~~~~~~~~~-~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~---~~~~~~~~  173 (411)
T COG2124         103 RKLLAPAFTPRALRGYR-PLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDRP---QLLRWSDA  173 (411)
T ss_pred             HHHhccccCHHHHHHHH-HHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHH---HHHHHHHH
Confidence            99999999999999999 88889999888888 3  22 778899999999999999 99998864311   11111111


Q ss_pred             HHHHHHHhccCchhhhHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCChhHHHHHHhcc
Q 009087          244 ALKEAELRSTDVLPYWKAALCKIVPRQIKAEKAVTVIRKTVEELIIKCKEIVETEGERIDDEEYVNDSDPSILRFLLASR  323 (544)
Q Consensus       244 ~~~~~~~~~~~~~p~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~  323 (544)
                      ..    ..   ..+...     ......+..++...+.+++.++|++++.                ...+|+++.|+.+.
T Consensus       174 ~~----~~---~~~~~~-----~~~~~~~~~~a~~~~~~~~~~li~~rR~----------------~~~~dlls~l~~a~  225 (411)
T COG2124         174 LL----LR---LDPDLG-----PEEPWRRARAARRELDAYLRALIAERRA----------------APRDDLLSLLLSAE  225 (411)
T ss_pred             HH----hc---cCcccC-----CcccHHHHHHHHHHHHHHHHHHHHHhcc----------------CCcccHHHHHHHHh
Confidence            11    00   001100     0112455667888999999999998872                34567999998765


Q ss_pred             c----CCChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhcCChhhhHHHHhhh
Q 009087          324 E----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESM  399 (544)
Q Consensus       324 ~----~l~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~l~~lpyl~a~i~Etl  399 (544)
                      +    .++++||.++++++++||+|||+++|+|+++.|++||+.++++++|.+.               ||+.++|+|+|
T Consensus       226 ~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~---------------~~~~~~v~E~L  290 (411)
T COG2124         226 DDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR---------------PLLEAVVEETL  290 (411)
T ss_pred             hCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch---------------HHHHHHHHHHH
Confidence            4    3899999999999999999999999999999999999999999998765               89999999999


Q ss_pred             cCCCCCcccceeecccccccCCeeeCCCCEEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCCC
Q 009087          400 RLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNESNTDFRFIPFSGGPR  479 (544)
Q Consensus       400 Rl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r  479 (544)
                      |++|+++. .+|++.+|++++|+.||||+.|+++.+++||||++|+||++|||+||.            ..++|||+|+|
T Consensus       291 R~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H  357 (411)
T COG2124         291 RLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPH  357 (411)
T ss_pred             HhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCc
Confidence            99999988 999999999999999999999999999999999999999999999994            46999999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHhcceEEecCCCCcccccceeEecCCCeeEEEEEe
Q 009087          480 KCVGDQFALLEAIVALAILLQNMNFELVPDQNINMTTGATIHTTNGLYMKLRQR  533 (544)
Q Consensus       480 ~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  533 (544)
                      .|+|.+||++|++++++.|+++|++....+ ........+..+..+..+.++.+
T Consensus       358 ~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         358 RCLGAALARLELKVALAELLRRFPLLLLAE-PPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCCccccccccCCCcceeeeecC
Confidence            999999999999999999999999887765 22222344556666666666654


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=66.06  E-value=16  Score=23.57  Aligned_cols=43  Identities=12%  Similarity=0.167  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHH
Q 009087          329 VQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEI  371 (544)
Q Consensus       329 ~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei  371 (544)
                      -++...+..++-.|.|..+-.++-.|.+..-||+.+..+-+|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566677788888999999999999999999999998888776


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=57.32  E-value=3.6  Score=36.13  Aligned_cols=44  Identities=9%  Similarity=0.160  Sum_probs=34.5

Q ss_pred             CChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEE
Q 009087          387 DLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMI  432 (544)
Q Consensus       387 ~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~  432 (544)
                      .-..+.|||.|+.-+...  ..++-...+|+.++|..|||||.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~G--s~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDG--SRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCC--CEEEEEEcCceEECCEEeCCCCEEEE
Confidence            456789999999887653  34555567888899999999998765


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=49.87  E-value=15  Score=24.66  Aligned_cols=18  Identities=22%  Similarity=0.152  Sum_probs=15.9

Q ss_pred             HHHHHHhhChHHHHHHHH
Q 009087          352 WTLYLLSKDCNSLMKAQE  369 (544)
Q Consensus       352 ~~l~~L~~~P~~~~klr~  369 (544)
                      -++.+|.+||++.+|+.+
T Consensus         4 ~iV~YLv~nPevl~kl~~   21 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKE   21 (57)
T ss_pred             HHHHHHHHChHHHHHHHc
Confidence            367899999999999988


No 36 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=36.79  E-value=67  Score=24.74  Aligned_cols=39  Identities=26%  Similarity=0.354  Sum_probs=29.7

Q ss_pred             hHHHHHHHHHhCCeEEEecCCc------eEEEEcChHHHHHHHhh
Q 009087           92 FLPLFKWMNVYGPIYRLAAGPR------NFVVVSDPAIAKHVLRN  130 (544)
Q Consensus        92 ~~~l~~~~~kyG~i~~i~~g~~------~~vvv~dp~~i~~il~~  130 (544)
                      .+.+.++.-+||+|..|++|..      -+||-.|-..++....+
T Consensus        32 seemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   32 SEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             HHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            5678899999999999999763      36777777777766543


No 37 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=31.81  E-value=55  Score=20.11  Aligned_cols=28  Identities=18%  Similarity=0.241  Sum_probs=19.2

Q ss_pred             hHHHHHHHHHHHHHhCCCCCChhhhcCChhhhHHHHhhhc
Q 009087          361 CNSLMKAQEEIDRVLQGRSPSFEDIKDLKFLTRCINESMR  400 (544)
Q Consensus       361 P~~~~klr~Ei~~~~~~~~~~~~~l~~lpyl~a~i~EtlR  400 (544)
                      .++++.+|.|++.+            +-..++|+..|-.|
T Consensus        10 qEIL~EvrkEl~K~------------K~EIIeA~~~eL~r   37 (40)
T PF08776_consen   10 QEILEEVRKELQKV------------KEEIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH------------HHHHHHHHHHHHhc
Confidence            46677788888776            44567777777554


No 38 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=30.84  E-value=95  Score=20.38  Aligned_cols=36  Identities=17%  Similarity=0.304  Sum_probs=25.9

Q ss_pred             HHHHHHHhCCeEEEecCC----ceEEEEcChHHHHHHHhh
Q 009087           95 LFKWMNVYGPIYRLAAGP----RNFVVVSDPAIAKHVLRN  130 (544)
Q Consensus        95 l~~~~~kyG~i~~i~~g~----~~~vvv~dp~~i~~il~~  130 (544)
                      +.++..+||+|.++.+..    .-.|-..+.+.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            456788999999887644    346777788888888753


No 39 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=28.56  E-value=21  Score=35.19  Aligned_cols=57  Identities=9%  Similarity=0.250  Sum_probs=41.0

Q ss_pred             CChhhhHHHHhhhcCCCCCcccceeecccccccCCeeeCCCCEEEE-----------ecccccCCCCCCC
Q 009087          387 DLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMI-----------SVYNIHHSSQVWE  445 (544)
Q Consensus       387 ~lpyl~a~i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~G~~v~~-----------~~~~~~~d~~~~~  445 (544)
                      .-..+.|||.|+.-+.-.  ..++-...+|+.++|..||+||.|+.           .+-++..+.+++|
T Consensus       254 ~~n~I~A~V~~~qtv~~G--~~vrlRLle~~~v~~~~ipkgt~l~g~~~~~g~R~~i~I~si~~~g~iip  321 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDG--SAVKLRLLEPIQAGDLVIPKGTVLYGTAKIQGERLDIKISSIEYNGTILP  321 (410)
T ss_pred             CCCceEEEEcCceEEecC--CEEEEEEcCceeeCCEEecCCCEEEEEeeeccceEEEEEEEEEECCEEEE
Confidence            567789999999887653  34455567889999999999998764           4445555555555


No 40 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=28.42  E-value=52  Score=26.68  Aligned_cols=22  Identities=18%  Similarity=0.486  Sum_probs=16.8

Q ss_pred             CCcchHHHHHHHHHHHHHHHhc
Q 009087          480 KCVGDQFALLEAIVALAILLQN  501 (544)
Q Consensus       480 ~C~G~~~A~~e~~~~la~ll~~  501 (544)
                      .|.|+.||+.++-.++.+|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999974


No 41 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=27.05  E-value=29  Score=22.90  Aligned_cols=11  Identities=36%  Similarity=0.748  Sum_probs=9.1

Q ss_pred             eccCCCCCCCc
Q 009087          472 IPFSGGPRKCV  482 (544)
Q Consensus       472 ~~Fg~G~r~C~  482 (544)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999985


No 42 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=26.10  E-value=1.4e+02  Score=24.11  Aligned_cols=40  Identities=15%  Similarity=0.310  Sum_probs=31.0

Q ss_pred             cchHHHHHHHHHhCCeEEEecCCceEEEEcChHHHHHHHhhc
Q 009087           90 ALFLPLFKWMNVYGPIYRLAAGPRNFVVVSDPAIAKHVLRNY  131 (544)
Q Consensus        90 ~~~~~l~~~~~kyG~i~~i~~g~~~~vvv~dp~~i~~il~~~  131 (544)
                      +.-..+.+|.++||.+--.  .+...+...|++.++++...+
T Consensus        75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            3456799999999986554  234788899999999998654


No 43 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=22.88  E-value=26  Score=29.68  Aligned_cols=36  Identities=22%  Similarity=0.368  Sum_probs=25.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcceeccCCCCCCCcchH
Q 009087          448 EEFLPERFDLEGPMPNESNTDFRFIPFSGGPRKCVGDQ  485 (544)
Q Consensus       448 ~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  485 (544)
                      -+|+|++|-+  -...-..++.+.+-|..|+=.|-|..
T Consensus        35 aeYnP~qFpG--lv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPG--LVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCe--eEEEecCCcceEEEEecCcEEEeccC
Confidence            3789999942  11112235668899999999999964


No 44 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=22.82  E-value=2e+02  Score=21.13  Aligned_cols=38  Identities=8%  Similarity=-0.085  Sum_probs=28.0

Q ss_pred             hHHHHHHHHHhCCe---EEEecCCceEEEEcCh-----HHHHHHHh
Q 009087           92 FLPLFKWMNVYGPI---YRLAAGPRNFVVVSDP-----AIAKHVLR  129 (544)
Q Consensus        92 ~~~l~~~~~kyG~i---~~i~~g~~~~vvv~dp-----~~i~~il~  129 (544)
                      .+..++++++|.++   +++..++.+-+.|++.     +.+.++++
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq   68 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ   68 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence            45567788999987   9999888888888554     55555553


No 45 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=21.77  E-value=3.4e+02  Score=20.09  Aligned_cols=49  Identities=10%  Similarity=0.021  Sum_probs=40.3

Q ss_pred             ChHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 009087          327 SSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDCNSLMKAQEEIDRVL  375 (544)
Q Consensus       327 ~~~ei~~~~~~~~~aG~dtts~tl~~~l~~L~~~P~~~~klr~Ei~~~~  375 (544)
                      ..+.........++-=++.++....-.+.+-++||+..+++.+.+..-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4455566667788888999999999999999999999999998886643


No 46 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=20.42  E-value=2.9e+02  Score=20.24  Aligned_cols=40  Identities=23%  Similarity=0.292  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHHhh--ChHHHHHHHHHHHHHhCCC-CCChhhhc
Q 009087          347 GSVLTWTLYLLSK--DCNSLMKAQEEIDRVLQGR-SPSFEDIK  386 (544)
Q Consensus       347 s~tl~~~l~~L~~--~P~~~~klr~Ei~~~~~~~-~~~~~~l~  386 (544)
                      +-.|+|++..|-+  .+..+|.|++.+.....+- .|+.+.+.
T Consensus        13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~l~   55 (80)
T PF10264_consen   13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEVLY   55 (80)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHHHH
Confidence            4567888888876  4667899999998887652 35555443


No 47 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=20.12  E-value=66  Score=21.94  Aligned_cols=7  Identities=43%  Similarity=0.439  Sum_probs=5.4

Q ss_pred             CCCCCCC
Q 009087          451 LPERFDL  457 (544)
Q Consensus       451 ~P~Rfl~  457 (544)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888874


Done!