BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009091
(544 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 311 bits (797), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/449 (38%), Positives = 260/449 (57%), Gaps = 21/449 (4%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG LC + TG A K I KR++ K D+E + RE+Q+++ L NI++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 92
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+ED+ +LV E+ +GGELFD+II++ ++E AA + R +++ + + H ++HRDL
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWS 281
KPEN LL +K A ++ DFGLS + K +D +G+AYY+APEVL +Y ++ DVWS
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 212
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
GVILYILLSG PPF E I + KG FE W +S+SAKDL+RKML P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 342 RITSAEVLEHPWMREGGE---ASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEE 397
RI++ + L+H W++ + + D P + ++QF+ KL + AL + L S++
Sbjct: 273 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQD 332
Query: 398 EIKGLKTMFANMDTDKSGTITYEELKTGL-----------ARLGSKLSETEVKQLMDAAD 446
E K L +F MD + G + EL G + L + E EV Q++DA D
Sbjct: 333 ETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVD 392
Query: 447 VDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-- 504
D NG I+Y EF++ M R L E L +AF+ FD DNSG I+ EL T +G+
Sbjct: 393 FDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVSDV 449
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
D + K ++SEVD +NDG ++++EF M+
Sbjct: 450 DSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 311 bits (796), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 175/449 (38%), Positives = 260/449 (57%), Gaps = 21/449 (4%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG LC + TG A K I KR++ K D+E + RE+Q+++ L NI++
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 116
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+ED+ +LV E+ +GGELFD+II++ ++E AA + R +++ + + H ++HRDL
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWS 281
KPEN LL +K A ++ DFGLS + K +D +G+AYY+APEVL +Y ++ DVWS
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 236
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
GVILYILLSG PPF E I + KG FE W +S+SAKDL+RKML P
Sbjct: 237 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 296
Query: 342 RITSAEVLEHPWMREGGE---ASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEE 397
RI++ + L+H W++ + + D P + ++QF+ KL + AL + L S++
Sbjct: 297 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQD 356
Query: 398 EIKGLKTMFANMDTDKSGTITYEELKTGL-----------ARLGSKLSETEVKQLMDAAD 446
E K L +F MD + G + EL G + L + E EV Q++DA D
Sbjct: 357 ETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVD 416
Query: 447 VDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-- 504
D NG I+Y EF++ M R L E L +AF+ FD DNSG I+ EL T +G+
Sbjct: 417 FDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVSDV 473
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
D + K ++SEVD +NDG ++++EF M+
Sbjct: 474 DSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 311 bits (796), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 175/449 (38%), Positives = 260/449 (57%), Gaps = 21/449 (4%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG LC + TG A K I KR++ K D+E + RE+Q+++ L NI++
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 115
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+ED+ +LV E+ +GGELFD+II++ ++E AA + R +++ + + H ++HRDL
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWS 281
KPEN LL +K A ++ DFGLS + K +D +G+AYY+APEVL +Y ++ DVWS
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 235
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
GVILYILLSG PPF E I + KG FE W +S+SAKDL+RKML P
Sbjct: 236 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 295
Query: 342 RITSAEVLEHPWMREGGE---ASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEE 397
RI++ + L+H W++ + + D P + ++QF+ KL + AL + L S++
Sbjct: 296 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQD 355
Query: 398 EIKGLKTMFANMDTDKSGTITYEELKTGL-----------ARLGSKLSETEVKQLMDAAD 446
E K L +F MD + G + EL G + L + E EV Q++DA D
Sbjct: 356 ETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVD 415
Query: 447 VDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-- 504
D NG I+Y EF++ M R L E L +AF+ FD DNSG I+ EL T +G+
Sbjct: 416 FDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVSDV 472
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
D + K ++SEVD +NDG ++++EF M+
Sbjct: 473 DSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 276/458 (60%), Gaps = 20/458 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
+ + Y K+LG G +G LC + T A K I+++ V+ + E+ +++ L
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIK-IIRKTSVSTSSNSKLLEEVAVLKLL 93
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
NI++ +ED+++ +LVME GGELFD+II + + E AA + + +++ V +
Sbjct: 94 D-HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR 271
H ++HRDLKPEN LL +K+ A++K DFGLS + K ++ +G+AYY+APEVLR+
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK 212
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y ++ DVWS GVIL+ILL+G PPF +T++ I + KG F+S W +S+ AKDL+
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI 272
Query: 332 RKMLIQDPKKRITSAEVLEHPWMREGGEASDK----PIGSAVLSRMKQFRAMNKLKKMAL 387
++ML D ++RI++ + LEHPW++E + P + + M++F+ KL + AL
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAAL 332
Query: 388 KVIAEAL-SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARL-GSKLS-------ETEV 438
+A L S+EE K L +F ++D + G + +EL G ++L G +++ E+EV
Sbjct: 333 LYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEV 392
Query: 439 KQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAM 498
++ AAD D NG IDY EF++ M R L + L AFQ FD+D +G I+ DEL +
Sbjct: 393 DAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV- 451
Query: 499 KDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+G+ + + KE+IS +D++NDG +++EEFC M++
Sbjct: 452 --FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 253/445 (56%), Gaps = 21/445 (4%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG LC + TG A K I KR++ K D+E + RE+Q+++ L NI +
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXKLY 92
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+ED+ +LV E+ +GGELFD+II++ ++E AA + R +++ + + H ++HRDL
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWS 281
KPEN LL +K A ++ DFGLS + K +D +G+AYY+APEVL +Y ++ DVWS
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWS 212
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
GVILYILLSG PPF E I + KG FE W +S+SAKDL+RK L P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 342 RITSAEVLEHPWMREGGE---ASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEE 397
RI++ + L+H W++ + + D P + ++QF+ KL + AL L S++
Sbjct: 273 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGSKLTSQD 332
Query: 398 EIKGLKTMFANMDTDKSGTITYEELKTGL-----------ARLGSKLSETEVKQLMDAAD 446
E K L +F D + G + EL G + L + E EV Q++DA D
Sbjct: 333 ETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVD 392
Query: 447 VDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-- 504
D NG I+Y EF++ R L E L +AF+ FD DNSG I+ EL T +G+
Sbjct: 393 FDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI---FGVSDV 449
Query: 505 DEASIKEIISEVDTDNDGRINYEEF 529
D + K ++SEVD +NDG ++++EF
Sbjct: 450 DSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 262/464 (56%), Gaps = 30/464 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + LG+G FG C + T YA K I K NK D I RE+++++ L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI++ ED S ++V EL +GGELFD+II + ++E AA + + + + + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK 275
++HRDLKPEN LL +K+ +K DFGLS + +D +G+AYY+APEVLR +Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+ DVWSAGVILYILLSG PPF+ + E I + G F+ W ISD AKDL+RKML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 336 IQDPKKRITSAEVLEHPWMR----EGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIA 391
P RIT+ + LEHPW++ E SD P + ++ ++QF+A KL + AL +A
Sbjct: 262 TFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMA 321
Query: 392 EALSE-EEIKGLKTMFANMDTDKSGTITYEELKTG---LARL------------GSKLSE 435
L+ +E K L +F +DT+ G + +EL G RL GS + E
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI-E 380
Query: 436 TEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELE 495
++ LM D+DG+G+I+Y EFI++ + R L E + +AF+ FDKD SG I+ EL
Sbjct: 381 DQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL- 439
Query: 496 TAMKDYGIGDEA----SIKEIISEVDTDNDGRINYEEFCTMMRS 535
K + D + ++ II +VD + DG +++ EF M+++
Sbjct: 440 --FKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 406 FANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHR 465
F D D SG I+ +EL ++ S + E++ +++ D + +G +D+ EF+ +
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
Query: 466 YRLE 469
R E
Sbjct: 483 VRNE 486
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 254/455 (55%), Gaps = 18/455 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y K+LG G +G LC + TG A K I K + + + E+ +++ L
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI++ +ED+++ +LVME+ GGELFD+II + ++E AA + + +++ + H
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK 275
++HRDLKPEN LL +K A++K DFGLS + G ++ +G+AYY+APEVLR+ Y +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 184
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+ DVWS GVILYILL G PPF +T++ I + KG F+ W +SD AK LV+ ML
Sbjct: 185 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 244
Query: 336 IQDPKKRITSAEVLEHPWMREGGEASDKPIG----SAVLSRMKQFRAMNKLKKMALKVIA 391
+P KRI++ E L HPW+ + +G + L MK+F++ KL + A+ +
Sbjct: 245 TYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMG 304
Query: 392 EALSE-EEIKGLKTMFANMDTDKSGTITYEELKTGLARL----GSKLS-------ETEVK 439
L+ EE K L +F +D + G + +EL G +L G +S E EV
Sbjct: 305 SKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVD 364
Query: 440 QLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMK 499
++ + D D NG I+Y EF++ M + L E L AFQ FD D SG IT +EL
Sbjct: 365 HILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 424
Query: 500 DYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
+ DE + +++ E D +NDG +++EEF MM+
Sbjct: 425 VTEVDDE-TWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 253/479 (52%), Gaps = 33/479 (6%)
Query: 78 VQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-- 135
V+K E +G+ +R+ LG G +G LC E G+S ++K+ +K
Sbjct: 27 VRKKEGKIGESYFKVRK-------LGSGAYGEVLLCKE-KNGHSEKAIKVIKKSQFDKGR 78
Query: 136 ---------QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI 186
+ E+I EI +++ L NI++ +ED++ +LV E GGELF++I
Sbjct: 79 YSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI 137
Query: 187 IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
I + + E AA + + I++ + + H ++HRD+KPEN LL NK+ +K DFGLS
Sbjct: 138 INRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
Query: 247 FIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFD 306
F + RD +G+AYY+APEVL++ Y ++ DVWS GVI+YILL G PPF + ++ I
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK 257
Query: 307 AILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG---EASDK 363
+ KG F+ W ISD AK+L++ ML D KR T+ E L W+++ SD+
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQ 317
Query: 364 PIGSAVLSRMKQFRAMNKLKKMALKVIAEALSE-EEIKGLKTMFANMDTDKSGTITYEEL 422
LS M++F KL + A+ I L+ EE K L +F +D + G + +EL
Sbjct: 318 KTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKEL 377
Query: 423 KTGLARLGS--------KLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHL 474
G L + K E EV ++ D D NG I+Y EFIS M + L +E L
Sbjct: 378 IEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERL 437
Query: 475 YKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMM 533
+AF FD D SG IT++EL I E + +++ E D + D I+++EF +MM
Sbjct: 438 RRAFNLFDTDKSGKITKEELANLFGLTSIS-EKTWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 182/299 (60%), Gaps = 5/299 (1%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K EDI++ + + LG G F L E +TG +A K I K+ L K+ I+ EI
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIA 72
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
+++ + +NIV YE ++LVM+L SGGELFD+I+ +G YTEK A+ L R +++
Sbjct: 73 VLRKIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD 131
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V++ H MG++HRDLKPEN L ++D + + +DFGLS +G V G+ YVAP
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 267 EVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ ILK +F+S W ISD
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISD 251
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKK 384
SAKD +R ++ +DP KR T + HPW+ G A +K I +V +++++ A +K ++
Sbjct: 252 SAKDFIRNLMEKDPNKRYTCEQAARHPWI-AGDTALNKNIHESVSAQIRKNFAKSKWRQ 309
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 186/323 (57%), Gaps = 7/323 (2%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L +ELG+G F + C + TG YA K I +KL + +D + ++RE +I + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 63
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + + +LV +L +GGELF+ I+A+ +Y+E A+ + I+ V+HCH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRRS-Y 273
++HRDLKPEN LL++K GA +K DFGL++ + + + + G+ Y++PEVLR+ Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKDL+ K
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEA 393
ML +P KRIT++E L+HPW+ + + + +K+F A KLK L +
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM--- 300
Query: 394 LSEEEIKGLKTMFANMDTDKSGT 416
L+ K++ D K T
Sbjct: 301 LATRNFSAAKSLLKKPDGVKEST 323
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 176/294 (59%), Gaps = 4/294 (1%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
+ Y L +ELG+G F + C + G YA K I +KL + +D + ++RE +I + L
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREARICRLL 78
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
NIV + + +L+ +L +GGELF+ I+A+ +Y+E A+ + I+ V HC
Sbjct: 79 K-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLR 270
H MGV+HRDLKPEN LL++K GA +K DFGL++ ++ E + + G+ Y++PEVLR
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 271 RS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
+ YGK +D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKD
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 257
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLK 383
L+ KML +P KRIT+AE L+HPW+ + + +K+F A KLK
Sbjct: 258 LINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 178/297 (59%), Gaps = 4/297 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L +ELG+G F + C + TG YA K I +KL + +D + ++RE +I + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 63
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + + +LV +L +GGELF+ I+A+ +Y+E A+ + I+ V+HCH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRRS-Y 273
++HRDLKPEN LL++K GA +K DFGL++ + + + + G+ Y++PEVLR+ Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKDL+ K
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVI 390
ML +P KRIT++E L+HPW+ + + + +K+F A KLK L +
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM 300
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 177/297 (59%), Gaps = 4/297 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L +ELG+G F + C + G YA I +KL + +D + ++RE +I + L
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICR-LLKHP 70
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + + +L+ +L +GGELF+ I+A+ +Y+E A+ + I+ V HCH MG
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRRS-Y 273
V+HR+LKPEN LL++K GA +K DFGL++ ++ E + + G+ Y++PEVLR+ Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKDL+ K
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVI 390
ML +P KRIT+AE L+HPW+ + + +K+F A KLK L V+
Sbjct: 251 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM 307
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 177/290 (61%), Gaps = 4/290 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L +++G+G F + C + TG+ YA K I +KL + +D + ++RE +I + L
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARICRLLK-HS 63
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + + +LV +L +GGELF+ I+A+ +Y+E A+ + I+ V HCH MG
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRR-SY 273
V+HRDLKPEN LL++K GA +K DFGL++ + + + + G+ Y++PEVLR+ +Y
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AK+L+ +
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 243
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLK 383
ML +P KRIT+ E L+HPW+ + + + +K+F A KLK
Sbjct: 244 MLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 161/254 (63%), Gaps = 1/254 (0%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG LC + TG A K I KR++ K D+E + RE+Q+++ L NI++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 98
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+ED+ +LV E+ +GGELFD+II++ ++E AA + R +++ + + H ++HRDL
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWS 281
KPEN LL +K A ++ DFGLS + K +D +G+AYY+APEVL +Y ++ DVWS
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 218
Query: 282 AGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
GVILYILLSG PPF E I + KG FE W +S+SAKDL+RKML P
Sbjct: 219 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 278
Query: 342 RITSAEVLEHPWMR 355
RI++ + L+H W++
Sbjct: 279 RISARDALDHEWIQ 292
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 174/299 (58%), Gaps = 5/299 (1%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K EDIR Y LG G F L + T A K I K+ L K+ ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS--MENEIA 68
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++ H NIV YE ++L+M+L SGGELFD+I+ +G YTE+ A+ L +++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H +G++HRDLKPEN L + D + + +DFGLS D G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 267 EVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ ILK +F+S W ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKK 384
SAKD +R ++ +DP+KR T + L+HPW+ G A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 173/299 (57%), Gaps = 5/299 (1%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K EDIR Y LG G F L + T A K I K L K+ ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIA 68
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++ H NIV YE ++L+M+L SGGELFD+I+ +G YTE+ A+ L +++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H +G++HRDLKPEN L + D + + +DFGLS D G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 267 EVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ ILK +F+S W ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKK 384
SAKD +R ++ +DP+KR T + L+HPW+ G A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 173/299 (57%), Gaps = 5/299 (1%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K EDIR Y LG G F L + T A K I K L K+ ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIA 68
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++ H NIV YE ++L+M+L SGGELFD+I+ +G YTE+ A+ L +++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H +G++HRDLKPEN L + D + + +DFGLS D G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 267 EVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ ILK +F+S W ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKK 384
SAKD +R ++ +DP+KR T + L+HPW+ G A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 163/273 (59%), Gaps = 4/273 (1%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
DI Q+YTL +GRG +G + + T A K I K + +D + K+EI+IM+
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 79
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
L NI+ +ED ++LVMELC+GGELF++++ + + E AA + + +++ V +
Sbjct: 80 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
CH + V HRDLKPENFL + LK DFGL+ GK+ R VG+ YYV+P+VL
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
YG E D WSAGV++Y+LL G PPF A T+ + I +G F + WL +S A+ L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363
+R++L + PK+RITS + LEH W + +S +
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 291
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 163/273 (59%), Gaps = 4/273 (1%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
DI Q+YTL +GRG +G + + T A K I K + +D + K+EI+IM+
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 62
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
L NI+ +ED ++LVMELC+GGELF++++ + + E AA + + +++ V +
Sbjct: 63 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
CH + V HRDLKPENFL + LK DFGL+ GK+ R VG+ YYV+P+VL
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
YG E D WSAGV++Y+LL G PPF A T+ + I +G F + WL +S A+ L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363
+R++L + PK+RITS + LEH W + +S +
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 274
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 158/261 (60%), Gaps = 2/261 (0%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + LG+G FG C + T YA K I K NK D I RE+++++ L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI++ ED S ++V EL +GGELFD+II + ++E AA + + + + + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK 275
++HRDLKPEN LL +K+ +K DFGLS + +D +G+AYY+APEVLR +Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+ DVWSAGVILYILLSG PPF+ + E I + G F+ W ISD AKDL+RKML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 336 IQDPKKRITSAEVLEHPWMRE 356
P RIT+ + LEHPW+++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 158/261 (60%), Gaps = 2/261 (0%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + LG+G FG C + T YA K I K NK D I RE+++++ L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI++ ED S ++V EL +GGELFD+II + ++E AA + + + + + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK 275
++HRDLKPEN LL +K+ +K DFGLS + +D +G+AYY+APEVLR +Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+ DVWSAGVILYILLSG PPF+ + E I + G F+ W ISD AKDL+RKML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 336 IQDPKKRITSAEVLEHPWMRE 356
P RIT+ + LEHPW+++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 164/284 (57%), Gaps = 5/284 (1%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K EDIR Y LG G F L + T A K I K L K+ ++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIA 68
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
++ H NIV YE ++L+M+L SGGELFD+I+ +G YTE+ A+ L +++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H +G++HRDLKPEN L + D + + +DFGLS D G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 267 EVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ ILK +F+S W ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAV 369
SAKD +R ++ +DP+KR T + L+HPW+ G A DK I +V
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSV 290
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 190/326 (58%), Gaps = 10/326 (3%)
Query: 70 SSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK 129
S+A T + + G + + F+ + ELGRG I Y C + T YA K +LK
Sbjct: 29 SAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALK-VLK 87
Query: 130 RKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ 189
+ + D++ ++ EI ++ LS NI++ + +E + LV+EL +GGELFD+I+ +
Sbjct: 88 KTV----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK 142
Query: 190 GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
G+Y+E+ AA + I+ V + H G++HRDLKPEN L + A LK DFGLS ++
Sbjct: 143 GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202
Query: 250 EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAET-EKGIFDA 307
+ + + G+ Y APE+LR +YG E+D+WS G+I YILL G PF+ E ++ +F
Sbjct: 203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR 262
Query: 308 ILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGS 367
IL F S W +S +AKDLVRK+++ DPKKR+T+ + L+HPW+ G+A++
Sbjct: 263 ILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT--GKAANFVHMD 320
Query: 368 AVLSRMKQFRAMNKLKKMALKVIAEA 393
++++F A KLK V+A +
Sbjct: 321 TAQKKLQEFNARRKLKAAVKAVVASS 346
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 158/259 (61%), Gaps = 1/259 (0%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y K+LG G +G LC + TG A K I K + + + E+ +++ L
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 81
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI++ +ED+++ +LVME+ GGELFD+II + ++E AA + + +++ + H
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 141
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK 275
++HRDLKPEN LL +K A++K DFGLS + G ++ +G+AYY+APEVLR+ Y +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 201
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+ DVWS GVILYILL G PPF +T++ I + KG F+ W +SD AK LV+ ML
Sbjct: 202 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 261
Query: 336 IQDPKKRITSAEVLEHPWM 354
+P KRI++ E L HPW+
Sbjct: 262 TYEPSKRISAEEALNHPWI 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 173/296 (58%), Gaps = 3/296 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +ELG+G F + C +TG +A K I +KL + +D + ++RE +I + L
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HP 88
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + ++ +LV +L +GGELF+ I+A+ Y+E A+ + I+ + +CH G
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YG 274
++HR+LKPEN LL++K GA +K DFGL++ +++ + + G+ Y++PEVL++ Y
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
K +D+W+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK L+ M
Sbjct: 209 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 268
Query: 335 LIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVI 390
L +PKKRIT+ + L+ PW+ + + +K+F A KLK L +
Sbjct: 269 LTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM 324
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 173/297 (58%), Gaps = 4/297 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L +ELG+G F + C + + YA K I +KL + +D + ++RE +I + L
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 90
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + + +LV +L +GGELF+ I+A+ +Y+E A+ I+ V+H H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRRS-Y 273
++HRDLKPEN LL++K GA +K DFGL++ + E + + G+ Y++PEVLR+ Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AK+L+ +
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVI 390
ML +P KRIT+ + L+HPW+ + + + +++F A KLK L +
Sbjct: 271 MLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTM 327
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 175/296 (59%), Gaps = 8/296 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM--REGGEASDKPIGSAVLSRMKQFRA 378
AKD +R++L++DPKKR+T + L+HPW+ ++ +A + + + + K+F A
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAA 301
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 161/260 (61%), Gaps = 3/260 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +ELG+G F + C +TG +A K I +KL + +D + ++RE +I + L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HP 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + ++ +LV +L +GGELF+ I+A+ Y+E A+ + I+ + +CH G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YG 274
++HR+LKPEN LL++K GA +K DFGL++ +++ + + G+ Y++PEVL++ Y
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
K +D+W+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK L+ M
Sbjct: 186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 245
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +PKKRIT+ + L+ PW+
Sbjct: 246 LTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 161/260 (61%), Gaps = 3/260 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +ELG+G F + C +TG +A K I +KL + +D + ++RE +I + L
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HP 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + ++ +LV +L +GGELF+ I+A+ Y+E A+ + I+ + +CH G
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YG 274
++HR+LKPEN LL++K GA +K DFGL++ +++ + + G+ Y++PEVL++ Y
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
K +D+W+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK L+ M
Sbjct: 185 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 244
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +PKKRIT+ + L+ PW+
Sbjct: 245 LTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 161/260 (61%), Gaps = 3/260 (1%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +ELG+G F + C +TG +A K I +KL + +D + ++RE +I + L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HP 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV + ++ +LV +L +GGELF+ I+A+ Y+E A+ + I+ + +CH G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YG 274
++HR+LKPEN LL++K GA +K DFGL++ +++ + + G+ Y++PEVL++ Y
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
K +D+W+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK L+ M
Sbjct: 186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 245
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +PKKRIT+ + L+ PW+
Sbjct: 246 LTVNPKKRITADQALKVPWI 265
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 162/271 (59%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
ED+ Y +G+ELG GQF I C + TG YA K I KR+L + + RE+I+RE+
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + NI+ +E++ V L++EL SGGELFD + + TE A + I++
Sbjct: 68 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
VH+ H + H DLKPEN +L +K+ +K DFG++ I+ G +++I G+ +VA
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF ET++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+ AKD +R++L++DPK+R+ A+ LEH W++
Sbjct: 247 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 164/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG G+F + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 163/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG GQF + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L+ EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 161/269 (59%), Gaps = 6/269 (2%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQIM 148
+ Y +G+ELG GQF I C + TG YA K I KR+L + + RE+I+RE+ I+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
+ + NI+ +E++ V L++EL SGGELFD + + TE A + I++ V
Sbjct: 63 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 209 HHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
H+ H + H DLKPEN +L +K+ +K DFG++ I+ G +++I G+ +VAPE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
++ G E D+WS GVI YILLSG PF ET++ I DF+ E + S+
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPK+R+T A+ LEH W++
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 163/271 (60%), Gaps = 6/271 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
E++ +Y G+ELG G F + C E STG YA K I KR+ + + REDI+RE+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE++ V L++EL +GGELFD + + TE+ A + I+N
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + + H DLKPEN +L +++ +K DFGL+ ID G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ + +FE E + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPKKR+T + L+HPW++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 172/295 (58%), Gaps = 7/295 (2%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
+IR+ + + LG G F +L + TG +A K I K E+ EI +++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKK 62
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ +NIV YE +LVM+L SGGELFD+I+ +G YTEK A+ + + +++ V +
Sbjct: 63 IK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL- 269
H G++HRDLKPEN L + + + TDFGLS +++ + G+ YVAPEVL
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLA 180
Query: 270 RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
++ Y K +D WS GVI YILL G PPF+ ETE +F+ I +G +FES W IS+SAKD
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKK 384
+ +L +DP +R T + L HPW+ +G A + I +V ++++ A +K ++
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWI-DGNTALHRDIYPSVSLQIQKNFAKSKWRQ 294
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 160/269 (59%), Gaps = 6/269 (2%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQIM 148
+ Y +G+ELG GQF I C + TG YA K I KR+L + + RE+I+RE+ I+
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
+ + NI+ +E++ V L++EL SGGELFD + + TE A + I++ V
Sbjct: 84 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 209 HHCHFMGVMHRDLKPENFLLSNKD-GGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
H+ H + H DLKPEN +L +K+ +K DFG++ I+ G +++I G+ +VAPE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
++ G E D+WS GVI YILLSG PF ET++ I DF+ E + S+
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
AKD +R++L++DPK+R+ A+ LEH W++
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 162/270 (60%), Gaps = 6/270 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
+ + FY +G+ELG GQF I C E STG YA K I KR+ + RE+I+RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE+R V L++EL SGGELFD + + +E+ A + + I++
Sbjct: 68 ILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ AKD +RK+L+++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 162/270 (60%), Gaps = 6/270 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
+ + FY +G+ELG GQF I C E STG YA K I KR+ + RE+I+RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE+R V L++EL SGGELFD + + +E+ A + + I++
Sbjct: 68 ILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ AKD +RK+L+++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 174/311 (55%), Gaps = 13/311 (4%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ--DREDIKREIQ 146
ED+ Y L + +G+G F + C TG +A K + K + ED+KRE
Sbjct: 22 FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH----YTEKAAAALCR 202
I H+ +IVE Y +++V E G +L +I+ + Y+E A+ R
Sbjct: 79 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSA 261
I+ + +CH ++HRD+KPEN LL++K+ A +K DFG+++ + E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 262 YYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
+++APEV++R YGK +DVW GVIL+ILLSG PF+ E+ +F+ I+KG W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
IS+SAKDLVR+ML+ DP +RIT E L HPW++E + K + ++++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 381 KLKKMALKVIA 391
KLK L ++
Sbjct: 317 KLKGAVLAAVS 327
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 162/270 (60%), Gaps = 6/270 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
+ + FY +G+ELG GQF I C E STG YA K I KR+ + RE+I+RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE+R V L++EL SGGELFD + + +E+ A + + I++
Sbjct: 68 ILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ AKD +RK+L+++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 166/278 (59%), Gaps = 9/278 (3%)
Query: 82 ETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD---R 138
ET + +ED FY +G+ELG GQF I C E STG YA K I KR+ + R
Sbjct: 3 ETFKQQKVED---FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCR 59
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
E+I+RE+ I++ + NI+ YE+R V L++EL SGGELFD + + +E+ A
Sbjct: 60 EEIEREVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFIDEGKVYRDI 257
+ + I++ V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316
G+ +VAPE++ G E D+WS GVI YILLSG PF +T++ I DF+
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
E + S+ AKD +RK+L+++ +KR+T E L HPW+
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 162/270 (60%), Gaps = 6/270 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
+ + FY +G+ELG GQF I C E STG YA K I KR+ + RE+I+RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE+R V L++EL SGGELFD + + +E+ A + + I++
Sbjct: 68 ILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ AKD +RK+L+++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 162/270 (60%), Gaps = 6/270 (2%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ---DREDIKREIQ 146
+ + FY +G+ELG GQF I C E STG YA K I KR+ + RE+I+RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ + N++ YE+R V L++EL SGGELFD + + +E+ A + + I++
Sbjct: 68 ILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
V++ H + H DLKPEN +L +K+ +K DFGL+ I++G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
PE++ G E D+WS GVI YILLSG PF +T++ I DF+ E + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ AKD +RK+L+++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 189 bits (481), Expect = 3e-48, Method: Composition-based stats.
Identities = 95/164 (57%), Positives = 122/164 (74%), Gaps = 1/164 (0%)
Query: 374 KQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKL 433
KQF A NK KK AL+VIAE+LSEEEI GLK F +D DKSG IT+EELK GL R+G+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 434 SETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDE 493
E+E+ L AADVD +GTIDY EFI+AT+H ++ER++HL+ AF YFDKD SGYIT DE
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 494 LETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGT 537
L+ A +++G+ D I+E+ +VD DNDGRI+Y EF + G+
Sbjct: 121 LQQACEEFGVED-VRIEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 171/311 (54%), Gaps = 13/311 (4%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ--DREDIKREIQ 146
ED+ Y L + +G+G F + C TG +A K + K + ED+KRE
Sbjct: 22 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH----YTEKAAAALCR 202
I H+ +IVE Y +++V E G +L +I+ + Y+E A+ R
Sbjct: 79 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSA 261
I+ + +CH ++HRD+KP LL++K+ A +K FG+++ + E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 262 YYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
+++APEV++R YGK +DVW GVIL+ILLSG PF+ E+ +F+ I+KG W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
IS+SAKDLVR+ML+ DP +RIT E L HPW++E + K + ++++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 381 KLKKMALKVIA 391
KLK L ++
Sbjct: 317 KLKGAVLAAVS 327
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 171/311 (54%), Gaps = 13/311 (4%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ--DREDIKREIQ 146
ED+ Y L + +G+G F + C TG +A K + K + ED+KRE
Sbjct: 24 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 80
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH----YTEKAAAALCR 202
I H+ +IVE Y +++V E G +L +I+ + Y+E A+ R
Sbjct: 81 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSA 261
I+ + +CH ++HRD+KP LL++K+ A +K FG+++ + E G V VG+
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 262 YYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
+++APEV++R YGK +DVW GVIL+ILLSG PF+ E+ +F+ I+KG W
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 258
Query: 321 LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
IS+SAKDLVR+ML+ DP +RIT E L HPW++E + K + ++++F A
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 318
Query: 381 KLKKMALKVIA 391
KLK L ++
Sbjct: 319 KLKGAVLAAVS 329
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKREIQ 146
+R Y + K LG G G L E T A K I KRK RE +++ EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ L+ I++ + + D + ++V+EL GGELFDK++ E ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWL 321
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKREIQ 146
+R Y + K LG G G L E T A K I KRK RE +++ EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ L+ I++ + + D + ++V+EL GGELFDK++ E ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWL 321
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKREIQ 146
+R Y + K LG G G L E T A K I KRK RE +++ EI+
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ L+ I++ + + D + ++V+EL GGELFDK++ E ++
Sbjct: 67 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWL 321
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKREIQ 146
+R Y + K LG G G L E T A K I KRK RE +++ EI+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ L+ I++ + + D + ++V+EL GGELFDK++ E ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWL 321
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKREIQ 146
+R Y + K LG G G L E T A K I KRK RE +++ EI+
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ L+ I++ + + D + ++V+EL GGELFDK++ E ++
Sbjct: 74 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWL 321
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E W
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
AE LSEEEI GLK +F +DTD SGTIT++ELK GL R+GS+L E+E+K LMDAAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 451 GTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIK 510
GTIDY EFI+AT+H +LER+E+L AF YFDKD SGYIT DE++ A KD+G+ D+ I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHID 119
Query: 511 EIISEVDTDNDGRINYEEFCTMMR 534
++I E+D DNDG+I+Y EF MMR
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMR 143
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKREIQ 146
+R Y + K LG G G L E T A + I KRK RE +++ EI+
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ L+ I++ + + D + ++V+EL GGELFDK++ E ++
Sbjct: 207 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWL 321
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E W
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-----DIKREIQ 146
+R Y + K LG G G L E T A + I KRK RE +++ EI+
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
I++ L+ I++ + + D + ++V+EL GGELFDK++ E ++
Sbjct: 193 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
V + H G++HRDLKPEN LLS+++ ++K TDFG S + E + R + G+ Y+AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 267 EVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAE-TEKGIFDAILKGGVDFESEPWL 321
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F E W
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S+ A DLV+K+L+ DPK R T+ E L HPW+++
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 146/269 (54%), Gaps = 18/269 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSI-------LKRKLVNKQDREDIKREIQIMQHLSGQ 154
LGRG + C T YA K I + V ++ RE +E+ I++ +SG
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVDILRKVSGH 83
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NI++ + YE LV +L GELFD + + +EK + RA++ V+ H +
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-- 272
++HRDLKPEN LL D +K TDFG S +D G+ R++ G+ Y+APE++ S
Sbjct: 144 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 200
Query: 273 -----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
YGKE+D+WS GVI+Y LL+G PPFW + + I+ G F S W SD+
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 260
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
KDLV + L+ P+KR T+ E L HP+ ++
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 146/269 (54%), Gaps = 18/269 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSI-------LKRKLVNKQDREDIKREIQIMQHLSGQ 154
LGRG + C T YA K I + V ++ RE +E+ I++ +SG
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVDILRKVSGH 70
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NI++ + YE LV +L GELFD + + +EK + RA++ V+ H +
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-- 272
++HRDLKPEN LL D +K TDFG S +D G+ R++ G+ Y+APE++ S
Sbjct: 131 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 187
Query: 273 -----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
YGKE+D+WS GVI+Y LL+G PPFW + + I+ G F S W SD+
Sbjct: 188 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 247
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
KDLV + L+ P+KR T+ E L HP+ ++
Sbjct: 248 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 18/269 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSI-------LKRKLVNKQDREDIKREIQIMQHLSGQ 154
LGRG + C T YA K I + V ++ RE +E+ I++ +SG
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVDILRKVSGH 83
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NI++ + YE LV +L GELFD + + +EK + RA++ V+ H +
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-- 272
++HRDLKPEN LL D +K TDFG S +D G+ R + G+ Y+APE++ S
Sbjct: 144 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMN 200
Query: 273 -----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
YGKE+D+WS GVI+Y LL+G PPFW + + I+ G F S W SD+
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 260
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
KDLV + L+ P+KR T+ E L HP+ ++
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 25/304 (8%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G F I C + ++A K I KR N Q +EI ++ G NIV+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ------KEITALKLCEGHPNIVK 70
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ D+ LVMEL +GGELF++I + H++E A+ + R +V+ V H H +GV+HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVF-IDEGKVYRDIVGSAYYVAPEVLRRS-YGKEI 277
DLKPEN L ++++ +K DFG + + + + + +Y APE+L ++ Y +
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 278 DVWSAGVILYILLSGVPPFWAE-------TEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
D+WS GVILY +LSG PF + + I I KG FE E W +S AKDL
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI---------GSAVLSRMK-QFRAMN 380
++ +L DP KR+ + + + W+++G + S P+ G+AV + +K F A N
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFN 310
Query: 381 KLKK 384
K K+
Sbjct: 311 KYKR 314
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 149/265 (56%), Gaps = 15/265 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACK--SILKRKLVNKQ---DREDIKREIQIMQHLSGQQN 156
+GRG + C +TG+ +A K + +L +Q RE +RE I++ ++G +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGV 216
I+ +YE + LV +L GELFD + + +EK ++ R+++ V H +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS---- 272
+HRDLKPEN LL D ++ +DFG S ++ G+ R++ G+ Y+APE+L+ S
Sbjct: 222 VHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 273 ---YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
YGKE+D+W+ GVIL+ LL+G PPFW + + I++G F S W S + KD
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWM 354
L+ ++L DP+ R+T+ + L+HP+
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFF 363
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 170/325 (52%), Gaps = 22/325 (6%)
Query: 65 QQPMKSSATSTRPVQKP-------ETVLGKPLEDIRQFYTLGKE--LGRGQFGITYLCTE 115
+ P+KS TS V P ++ + FYT+ K LG G+FG + C E
Sbjct: 51 RMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEE 110
Query: 116 NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
+TG A K I R + +D+E++K EI +M L N+++ A+E + + LVME
Sbjct: 111 TATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVME 166
Query: 176 LCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234
GGELFD+II + + TE + I + H H M ++H DLKPEN L N+D
Sbjct: 167 YVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA- 225
Query: 235 AMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSY-GKEIDVWSAGVILYILLSGV 293
+K DFGL+ + + G+ ++APEV+ + D+WS GVI Y+LLSG+
Sbjct: 226 KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285
Query: 294 PPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
PF + + + IL D E E + IS+ AK+ + K+LI++ RI+++E L+HPW
Sbjct: 286 SPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPW 345
Query: 354 MREGGEASDKPIGSAVLSRMKQFRA 378
+ SD + S + ++ K+ R
Sbjct: 346 L------SDHKLHSRLSAQKKKNRG 364
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 8/282 (2%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +ELG G FG+ + TE +TGN++A K ++ ++ D+E +++EIQ M L
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLR-HP 108
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFM 214
+V A+ED + ++ E SGGELF+K+ + + +E A R + + H H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY 273
+H DLKPEN + + K LK DFGL+ +D + + G+A + APEV +
Sbjct: 169 NYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G D+WS GV+ YILLSG+ PF E + + + + + IS+ KD +RK
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 287
Query: 334 MLIQDPKKRITSAEVLEHPWMREG-GEASDKPIGSAVLSRMK 374
+L+ DP R+T + LEHPW+ G D I S+ ++++
Sbjct: 288 LLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIR 329
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 8/282 (2%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +ELG G FG+ + TE +TGN++A K ++ ++ D+E +++EIQ M L
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLR-HP 214
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFM 214
+V A+ED + ++ E SGGELF+K+ + + +E A R + + H H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSY 273
+H DLKPEN + + K LK DFGL+ +D + + G+A + APEV +
Sbjct: 275 NYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G D+WS GV+ YILLSG+ PF E + + + + + IS+ KD +RK
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 393
Query: 334 MLIQDPKKRITSAEVLEHPWMREG-GEASDKPIGSAVLSRMK 374
+L+ DP R+T + LEHPW+ G D I S+ ++++
Sbjct: 394 LLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIR 435
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 143/267 (53%), Gaps = 13/267 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + + +G G + C +T YA K I K K D EI+I+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + Y+D + V+LV EL GGEL DKI+ Q ++E+ A+ + I V + H G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 216 VMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRRS- 272
V+HRDLKP N L ++ G L+ DFG + + E + +A +VAPEVL+R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 273 YGKEIDVWSAGVILYILLSGVPPFW---AETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
Y + D+WS G++LY +L+G PF ++T + I I G W +S++AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMRE 356
LV KML DP +R+T+ +VL+HPW+ +
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 143/267 (53%), Gaps = 13/267 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + + +G G + C +T YA K I K K D EI+I+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + Y+D + V+LV EL GGEL DKI+ Q ++E+ A+ + I V + H G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 216 VMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFI-DEGKVYRDIVGSAYYVAPEVLRRS- 272
V+HRDLKP N L ++ G L+ DFG + + E + +A +VAPEVL+R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 273 YGKEIDVWSAGVILYILLSGVPPFW---AETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
Y + D+WS G++LY +L+G PF ++T + I I G W +S++AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMRE 356
LV KML DP +R+T+ +VL+HPW+ +
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 142/265 (53%), Gaps = 13/265 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +++G G + + C +T +A K I K K D EI+I+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + Y+D + V++V EL GGEL DKI+ Q ++E+ A+A+ I V + H G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 216 VMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFI-DEGKVYRDIVGSAYYVAPEVL-RRS 272
V+HRDLKP N L ++ G ++ DFG + + E + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWA---ETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
Y D+WS GV+LY +L+G PF +T + I I G W +SD+AKD
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWM 354
LV KML DP +R+T+A VL HPW+
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 140/265 (52%), Gaps = 13/265 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +++G G + + C +T +A K I K K D EI+I+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + Y+D + V++V EL GGEL DKI+ Q ++E+ A+A+ I V + H G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 216 VMHRDLKPENFLLSNKDGGA-MLKATDFGLSVFI-DEGKVYRDIVGSAYYVAPEVL-RRS 272
V+HRDLKP N L ++ G ++ DFG + + E + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWA---ETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
Y D+WS GV+LY L+G PF +T + I I G W +SD+AKD
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWM 354
LV K L DP +R+T+A VL HPW+
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 150/278 (53%), Gaps = 10/278 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E A K + K +L + ++REI+I HL
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + DR+ ++L++E GEL+ ++ G + E+ +A + + +H+CH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN L+ K LK DFG SV + R + G+ Y+ PE++ +++
Sbjct: 135 VIHRDIKPENLLMGYK---GELKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 190
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+W AGV+ Y L G+PPF + + I+ VD + P+L SD +KDL+ K+
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDLKFPPFL--SDGSKDLISKL 246
Query: 335 LIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSR 372
L P +R+ V+EHPW++ P+ + S+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 150/278 (53%), Gaps = 10/278 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E A K + K +L + ++REI+I HL
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 75
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + DR+ ++L++E GEL+ ++ G + E+ +A + + +H+CH
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN L+ K LK DFG SV + R + G+ Y+ PE++ +++
Sbjct: 136 VIHRDIKPENLLMGYK---GELKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 191
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+W AGV+ Y L G+PPF + + I+ VD + P+L SD +KDL+ K+
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDLKFPPFL--SDGSKDLISKL 247
Query: 335 LIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSR 372
L P +R+ V+EHPW++ P+ + S+
Sbjct: 248 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 285
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 145/266 (54%), Gaps = 11/266 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LVME SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G GS Y APE+ ++
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L++K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKK 246
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGE 359
LI +P KR T ++++ WM G E
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 145/266 (54%), Gaps = 11/266 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LVME SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G GS Y APE+ ++
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L++K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKK 246
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGE 359
LI +P KR T ++++ WM G E
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 146/266 (54%), Gaps = 11/266 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A + I K +L N + + RE++IM+ L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LVME SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G + GS Y APE+ ++
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L++K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKK 246
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGE 359
LI +P KR T ++++ WM G E
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 152/286 (53%), Gaps = 7/286 (2%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
+ +Y + +ELG G FG+ + C E +TG + K I D+ +K EI IM L
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLDKYTVKNEISIMNQL 105
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHH 210
++ A+ED+ + L++E SGGELFD+I A+ + +E R + H
Sbjct: 106 H-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 164
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL- 269
H ++H D+KPEN + K + +K DFGL+ ++ ++ + +A + APE++
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 270 RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
R G D+W+ GV+ Y+LLSG+ PF E + + + +F+ + + +S AKD
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQ 375
++ +L ++P+KR+T + LEHPW++ I S+ ++++Q
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQ 329
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 145/266 (54%), Gaps = 11/266 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A + I K +L N + + RE++IM+ L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LVME SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G GS Y APE+ ++
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L++K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKK 246
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGE 359
LI +P KR T ++++ WM G E
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 145/266 (54%), Gaps = 11/266 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LVME SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G G+ Y APE+ ++
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L++K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKK 246
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGE 359
LI +P KR T ++++ WM G E
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 145/266 (54%), Gaps = 11/266 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 66
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LVME SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G GS Y APE+ ++
Sbjct: 127 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L++K
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKK 239
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGE 359
LI +P KR T ++++ WM G E
Sbjct: 240 FLILNPSKRGTLEQIMKDRWMNVGHE 265
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 149/278 (53%), Gaps = 10/278 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + + LG+G+FG YL E A K + K +L + ++REI+I HL
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + DR+ ++L++E GEL+ ++ G + E+ +A + + +H+CH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN L+ K LK DFG SV + R + G+ Y+ PE++ +++
Sbjct: 135 VIHRDIKPENLLMGYK---GELKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 190
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+W AGV+ Y L G+PPF + + I+ VD + P+L SD +KDL+ K+
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDLKFPPFL--SDGSKDLISKL 246
Query: 335 LIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSR 372
L P +R+ V+EHPW++ P+ + S+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 137/263 (52%), Gaps = 10/263 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG LG G FG + TG+ A K + ++K+ + IKREIQ ++ L
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+I++ +VME SGGELFD I G E A L + I++ V +CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
V+HRDLKPEN LL D K DFGLS + +G+ RD GS Y APEV+ R
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+D+WS GVILY LL G PF E +F I +GGV + E ++ S L+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLMH 244
Query: 334 MLIQDPKKRITSAEVLEHPWMRE 356
ML DP KR T ++ EH W ++
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 147/298 (49%), Gaps = 35/298 (11%)
Query: 96 YTLGKEL-GRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
Y L EL G G + G YA K I K+ R + RE++ + G
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQA---GHSRSRVFREVETLYQCQGN 70
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+NI+E +ED +LV E GG + I Q H+ E+ A+ + R + + H
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI--------VGSAYYVAP 266
G+ HRDLKPEN L + + + +K DF L + I GSA Y+AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 267 EVLR------RSYGKEIDVWSAGVILYILLSGVPPF---------WAETE------KGIF 305
EV+ Y K D+WS GV+LYI+LSG PPF W E +F
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 250
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDK 363
++I +G +F + W IS AKDL+ K+L++D K+R+++A+VL+HPW++ G+A +K
Sbjct: 251 ESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GQAPEK 306
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 148/280 (52%), Gaps = 7/280 (2%)
Query: 82 ETVLGKPLEDIRQFYTL-GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD-RE 139
E + + +E+ FY L KELGRG+F + C STG YA K + KR+ QD R
Sbjct: 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR--RGQDCRA 73
Query: 140 DIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAA 197
+I EI +++ ++ YE+ + L++E +GGE+F + + +E
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV 133
Query: 198 AALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI 257
L + I+ V++ H ++H DLKP+N LLS+ +K DFG+S I R+I
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI 193
Query: 258 VGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316
+G+ Y+APE+L D+W+ G+I Y+LL+ PF E + + I + VD+
Sbjct: 194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS 253
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
E + +S A D ++ +L+++P+KR T+ L H W+++
Sbjct: 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG LG G FG + TG+ A K + ++K+ + IKREIQ ++ L
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+I++ +VME SGGELFD I G E A L + I++ V +CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
V+HRDLKPEN LL D K DFGLS + +G+ R GS Y APEV+ R
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+D+WS GVILY LL G PF E +F I +GGV + E ++ S L+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLMH 244
Query: 334 MLIQDPKKRITSAEVLEHPWMRE 356
ML DP KR T ++ EH W ++
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 152/272 (55%), Gaps = 12/272 (4%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
I + ++LG G FG +L E S+G K+I K + ++ E I+ EI++++ L
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSL 77
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII---AQGH-YTEKAAAALCRAIVNV 207
NI++ +ED ++++VME C GGEL ++I+ A+G +E A L + ++N
Sbjct: 78 D-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ + H V+H+DLKPEN L + + +K DFGL+ + + G+A Y+APE
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE 196
Query: 268 VLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF--ESEPWLLISD 325
V +R + D+WSAGV++Y LL+G PF + + + ++ E P ++
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP---LTP 253
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
A DL+++ML +DP++R ++A+VL H W ++
Sbjct: 254 QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 145/285 (50%), Gaps = 21/285 (7%)
Query: 96 YTLGKE-LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
Y L K+ LG G G C TG A K + D ++E+ SG
Sbjct: 11 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGG 62
Query: 155 QNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVV 208
+IV YE+ ++ + ++ME GGELF +I +G +TE+ AA + R I +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
H + HRD+KPEN L ++K+ A+LK TDFG + + + + + YYVAPEV
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEV 181
Query: 269 L-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GGVDFESEPWLLI 323
L Y K D+WS GVI+YILL G PPF++ T + I + + G F + W +
Sbjct: 182 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 241
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA 368
S+ AK L+R +L DP +R+T + + HPW+ + P+ +A
Sbjct: 242 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 145/285 (50%), Gaps = 21/285 (7%)
Query: 96 YTLGKE-LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
Y L K+ LG G G C TG A K + D ++E+ SG
Sbjct: 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGG 81
Query: 155 QNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVV 208
+IV YE+ ++ + ++ME GGELF +I +G +TE+ AA + R I +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
H + HRD+KPEN L ++K+ A+LK TDFG + + + + + YYVAPEV
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEV 200
Query: 269 L-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GGVDFESEPWLLI 323
L Y K D+WS GVI+YILL G PPF++ T + I + + G F + W +
Sbjct: 201 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 260
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA 368
S+ AK L+R +L DP +R+T + + HPW+ + P+ +A
Sbjct: 261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 148/273 (54%), Gaps = 12/273 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HP 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++L+ME SGGE+FD ++A G EK A + R IV+ V +CH
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G GS Y APE+ ++
Sbjct: 132 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L+++
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKR 244
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASD-KPI 365
L+ +P KR T ++++ W+ G E + KP
Sbjct: 245 FLVLNPIKRGTLEQIMKDRWINAGHEEDELKPF 277
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 149/283 (52%), Gaps = 19/283 (6%)
Query: 88 PLEDIRQF----YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR 143
PL RQ+ + +G+ LG+G+FG YL E + A K + K +L ++R
Sbjct: 2 PLGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA 203
E++I HL NI+ G + D V+L++E G ++ ++ + E+ A
Sbjct: 62 EVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAY 262
+ N + +CH V+HRD+KPEN LL + LK DFG SV + RD + G+
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSVHAPSSR--RDTLCGTLD 175
Query: 263 YVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
Y+ PE++ R + +++D+WS GV+ Y L G+PPF A T + + I + F
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD---- 231
Query: 322 LISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
+++ A+DL+ ++L + +R+T AEVLEHPW++ S KP
Sbjct: 232 FVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 138/263 (52%), Gaps = 10/263 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y LG LG G FG + TG+ A K + ++K+ + I+REIQ ++ L
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+I++ + +VME SGGELFD I G EK + L + I++ V +CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
V+HRDLKPEN LL D K DFGLS + +G+ R GS Y APEV+ R
Sbjct: 137 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+D+WS+GVILY LL G PF + +F I G F + +L + S L++
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQYL--NPSVISLLKH 249
Query: 334 MLIQDPKKRITSAEVLEHPWMRE 356
ML DP KR T ++ EH W ++
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 50 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 109
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ + YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 170 SHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 230 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 289
Query: 365 IGSA 368
+ ++
Sbjct: 290 LHTS 293
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 56 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 115
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 116 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 175
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 176 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 235
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 236 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 295
Query: 365 IGSA 368
+ ++
Sbjct: 296 LHTS 299
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 102 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 161
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 162 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 221
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 222 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 281
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 282 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 341
Query: 365 IGSA 368
+ ++
Sbjct: 342 LHTS 345
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 57 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 116
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 117 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 176
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 177 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 236
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 237 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 296
Query: 365 IGSA 368
+ ++
Sbjct: 297 LHTS 300
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 145/274 (52%), Gaps = 14/274 (5%)
Query: 87 KPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
K +++ ++Y L + +G G F L TG A K + K L D IK EI+
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIE 60
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
+++L Q+I + E + +V+E C GGELFD II+Q +E+ + R IV+
Sbjct: 61 ALKNLR-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS 119
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY--RDIVGSAYYV 264
V + H G HRDLKPEN L D LK DFGL K Y + GS Y
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 265 APEVLR-RSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
APE+++ +SY G E DVWS G++LY+L+ G PF + ++ I++G D WL
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--WL- 233
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
S S+ L+++ML DPKKRI+ +L HPW+ +
Sbjct: 234 -SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 52 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 111
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 231
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 232 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
Query: 365 IGSA 368
+ ++
Sbjct: 292 LHTS 295
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 96 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 155
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 276 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 335
Query: 365 IGSA 368
+ ++
Sbjct: 336 LHTS 339
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 145/276 (52%), Gaps = 11/276 (3%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 52 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 111
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 231
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 232 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
Query: 365 IGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIK 400
+ ++ + + + R + ++M + + E+IK
Sbjct: 292 LHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIK 327
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 58 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 117
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 118 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 177
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 178 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 237
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 238 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 297
Query: 365 IGSA 368
+ ++
Sbjct: 298 LHTS 301
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 50 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 109
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 170 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 230 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 289
Query: 365 IGSA 368
+ ++
Sbjct: 290 LHTS 293
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 51 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 110
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 111 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 170
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 171 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 230
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 231 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 290
Query: 365 IGSA 368
+ ++
Sbjct: 291 LHTS 294
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 66 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 125
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 126 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 185
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 186 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 245
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P
Sbjct: 246 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 305
Query: 365 IGSA 368
+ ++
Sbjct: 306 LHTS 309
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 17/282 (6%)
Query: 88 PLEDIRQF----YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR 143
PL RQ+ + +G+ LG+G+FG YL E + A K + K +L ++R
Sbjct: 2 PLGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRA 203
E++I HL NI+ G + D V+L++E G ++ ++ + E+ A
Sbjct: 62 EVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ N + +CH V+HRD+KPEN LL + LK DFG SV + + G+ Y
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSVHAPSSR-RTTLCGTLDY 176
Query: 264 VAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
+ PE++ R + +++D+WS GV+ Y L G+PPF A T + + I + F
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----F 232
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
+++ A+DL+ ++L + +R+T AEVLEHPW++ S KP
Sbjct: 233 VTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 156/321 (48%), Gaps = 52/321 (16%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL--VNKQDREDIKR 143
G L ++++ Y L +G+G +G+ + EN T A K + K K+ +N +D E IK
Sbjct: 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI--------------IAQ 189
E+++M+ L NI YED Q + LVMELC GG L DK+ + +
Sbjct: 78 EVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 190 GHYT--------------------------EKAAAALCRAIVNVVHHCHFMGVMHRDLKP 223
EK + + R I + +H+ H G+ HRD+KP
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP 196
Query: 224 ENFLLSNKDGGAMLKATDFGLS---VFIDEGKVY--RDIVGSAYYVAPEVLR---RSYGK 275
ENFL S + +K DFGLS ++ G+ Y G+ Y+VAPEVL SYG
Sbjct: 197 ENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKML 335
+ D WSAGV+L++LL G PF + +L + FE+ + ++S A+DL+ +L
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLL 315
Query: 336 IQDPKKRITSAEVLEHPWMRE 356
++ +R + L+HPW+ +
Sbjct: 316 NRNVDERFDAMRALQHPWISQ 336
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 12/273 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HP 74
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++L+ME SGGE+FD ++A G EK A + R IV+ V +CH
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G G+ Y APE+ ++
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L+++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKR 247
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASD-KPI 365
L+ +P KR T ++++ W+ G E + KP
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWINAGHEEDELKPF 280
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + D+ G+ Y+ PE++ R +
Sbjct: 155 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHD 210
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 266
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 267 LKHNPSQRPMLREVLEHPWI 286
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 158/300 (52%), Gaps = 12/300 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + ++LGRG+FGI + C E S+ +Y K + V D+ +K+EI I+ +++ +
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISIL-NIARHR 61
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NI+ ++E + + ++ E SG ++F++I + E+ + + + H
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSY- 273
+ H D++PEN + + +K +FG + + G +R + + Y APEV +
Sbjct: 122 NIGHFDIRPENIIYQTRRSST-IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
D+WS G ++Y+LLSG+ PF AET + I + I+ F+ E + IS A D V +
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMNKLKKMALKVIAEA 393
+L+++ K R+T++E L+HPW+++ E + + V+ +K R + L K L ++ A
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLKHRRYYHTLIKKDLNMVVSA 296
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 139/267 (52%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 12 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E GE++ ++ + E+ A + N +
Sbjct: 68 SHLR-HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RXXLXGTLDYLPPEM 182
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 238
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 139/267 (52%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 12 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E GE++ ++ + E+ A + N +
Sbjct: 68 SHLR-HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 182
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 238
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 139/267 (52%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 8 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 64 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + D+ G+ Y+ PE+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEM 178
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 234
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 139/267 (52%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 12 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 68 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + D+ G+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEM 182
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 238
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + D+ G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 241 LKHNPSQRPMLREVLEHPWI 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + D+ G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 241 LKHNPSQRPMLREVLEHPWI 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + D+ G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHD 187
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 244 LKHNPSQRPMLREVLEHPWI 263
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 140/266 (52%), Gaps = 11/266 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++I + L+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLN-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LV E SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL D +K DFG S G G+ Y APE+ ++
Sbjct: 134 IVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ +D ++L++K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYXSTD-CENLLKK 246
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGE 359
LI +P KR T ++ + W G E
Sbjct: 247 FLILNPSKRGTLEQIXKDRWXNVGHE 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 8 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 64 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPE 267
+CH V+HRD+KPEN LL + LK DFG SV + RD + G+ Y+ PE
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR--RDTLCGTLDYLPPE 177
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
++ R + +++D+WS GV+ Y L G PPF A T + + I + F +++
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEG 233
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWM 354
A+DL+ ++L +P +R EVLEHPW+
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 33 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 88
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 89 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 203
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 259
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 260 RDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 7 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 63 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + ++ G+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTELCGTLDYLPPEM 177
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 233
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 150/272 (55%), Gaps = 12/272 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K +G+G F L TG A K I K +L N + + RE++IM+ L+
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKILN-HP 74
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NIV+ E ++++LVME SGGE+FD ++A G EK A A R IV+ V +CH
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLK EN LL DG +K DFG S G GS Y APE+ ++
Sbjct: 135 IVHRDLKAENLLL---DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY L+SG PF + K + + +L+G P+ + +D ++L++K
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PFYMSTD-CENLLKK 247
Query: 334 MLIQDPKKRITSAEVLEHPWMREGGEASD-KP 364
+L+ +P KR + ++++ WM G E + KP
Sbjct: 248 LLVLNPIKRGSLEQIMKDRWMNVGHEEEELKP 279
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 24 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 79
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 80 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 138
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 194
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 250
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 251 RDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E ++ A K + K +L ++RE++I HL
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHD 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 241 LKHNPSQRPMLREVLEHPWI 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 7 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 63 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 177
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 233
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 12 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 68 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 182
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 238
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 9 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 65 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEM 179
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 235
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 236 RDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 10 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 66 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 180
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 236
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 12 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 68 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEX 182
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 238
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 239 RDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 6 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 61
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 62 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 176
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 232
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 233 RDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 125/244 (51%), Gaps = 11/244 (4%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +V E GGELF +I +G
Sbjct: 96 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGD 155
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG +
Sbjct: 156 QAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 250 EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGI 304
+ YYVAPEVL Y K D WS GVI YILL G PPF++ G
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGX 275
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I G +F + W +S+ K L+R +L +P +R T E HPW+ + + P
Sbjct: 276 KTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTP 335
Query: 365 IGSA 368
+ ++
Sbjct: 336 LHTS 339
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 11 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 66
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 67 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 181
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 237
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 238 RDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 10 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 66 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEM 180
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 236
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 241 LKHNPSQRPMLREVLEHPWI 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K +L ++RE++I HL
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 187
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 244 LKHNPSQRPMLREVLEHPWI 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 7 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 63 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTXLCGTLDYLPPEM 177
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 233
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 10 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 66 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEM 180
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 236
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 7 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 63 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEM 177
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 233
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 32/283 (11%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG G C T YA K I K+ R + RE++++ G +N++E
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+E+ +LV E GG + I + H+ E A+ + + + + + H G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI--------VGSAYYVAPEVLR--- 270
KPEN L + + + +K DFGL I I GSA Y+APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 271 ---RSYGKEIDVWSAGVILYILLSGVPPF---------WAETEKG------IFDAILKGG 312
Y K D+WS GVILYILLSG PPF W E +F++I +G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+F + W IS +AKDL+ K+L++D K+R+++A+VL+HPW++
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 9 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 65 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK +FG SV + + G+ Y+ PE+
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGS---AGELKIANFGWSVHAPSSR-RTTLCGTLDYLPPEM 179
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 235
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 236 RDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 17/280 (6%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 8 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 64 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK DFG S + + G+ Y+ PE+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSCHAPSSR-RTTLSGTLDYLPPEM 178
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 234
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGS 367
+DL+ ++L +P +R EVLEHPW+ S KP S
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKPSNS 271
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 10/260 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E A K + K +L ++RE++I HL
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ G + D V+L++E G ++ ++ + E+ A + N + +CH
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL + LK DFG SV + + G+ Y+ PE++ R +
Sbjct: 126 VIHRDIKPENLLLGS---AGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 181
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+WS GV+ Y L G PPF A T + + I + F +++ A+DL+ ++
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 237
Query: 335 LIQDPKKRITSAEVLEHPWM 354
L +P +R EVLEHPW+
Sbjct: 238 LKHNPSQRPMLREVLEHPWI 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LED + +G+ LG+G+FG YL E + A K + K +L ++RE++I
Sbjct: 10 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
HL NI+ G + D V+L++E G ++ ++ + E+ A + N +
Sbjct: 66 SHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+CH V+HRD+KPEN LL + LK +FG SV + + G+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGS---AGELKIANFGWSVHAPSSR-RTTLCGTLDYLPPEM 180
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSA 327
+ R + +++D+WS GV+ Y L G PPF A T + + I + F +++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 236
Query: 328 KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+DL+ ++L +P +R EVLEHPW+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 32/283 (11%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG G C T YA K I K+ R + RE++++ G +N++E
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+E+ +LV E GG + I + H+ E A+ + + + + + H G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI--------VGSAYYVAPEVLR--- 270
KPEN L + + + +K DF L I I GSA Y+APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 271 ---RSYGKEIDVWSAGVILYILLSGVPPF---------WAETEKG------IFDAILKGG 312
Y K D+WS GVILYILLSG PPF W E +F++I +G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+F + W IS +AKDL+ K+L++D K+R+++A+VL+HPW++
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 11/262 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K LG G FG L +TG A K I K+ L + I+REI ++ L
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+I++ + + + +V+E +G ELFD I+ + +E+ A + I++ V +CH
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLKPEN LL D +K DFGLS + +G + GS Y APEV+ +
Sbjct: 124 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY++L PF E+ +F I G +S A L+++
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 236
Query: 334 MLIQDPKKRITSAEVLEHPWMR 355
MLI +P RI+ E+++ W +
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFK 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 11/262 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K LG G FG L +TG A K I K+ L + I+REI ++ L
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 74
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+I++ + + + +V+E +G ELFD I+ + +E+ A + I++ V +CH
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLKPEN LL D +K DFGLS + +G + GS Y APEV+ +
Sbjct: 134 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY++L PF E+ +F I G +S A L+++
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 246
Query: 334 MLIQDPKKRITSAEVLEHPWMR 355
MLI +P RI+ E+++ W +
Sbjct: 247 MLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 11/262 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K LG G FG L +TG A K I K+ L + I+REI ++ L
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 73
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+I++ + + + +V+E +G ELFD I+ + +E+ A + I++ V +CH
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLKPEN LL D +K DFGLS + +G + GS Y APEV+ +
Sbjct: 133 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY++L PF E+ +F I G +S A L+++
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 245
Query: 334 MLIQDPKKRITSAEVLEHPWMR 355
MLI +P RI+ E+++ W +
Sbjct: 246 MLIVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 11/262 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K LG G FG L +TG A K I K+ L + I+REI ++ L
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 68
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+I++ + + + +V+E +G ELFD I+ + +E+ A + I++ V +CH
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSY 273
++HRDLKPEN LL D +K DFGLS + +G + GS Y APEV+ +
Sbjct: 128 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRK 333
G E+DVWS GVILY++L PF E+ +F I G +S A L+++
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 240
Query: 334 MLIQDPKKRITSAEVLEHPWMR 355
MLI +P RI+ E+++ W +
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFK 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 19/265 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-DIKREIQIMQHLSGQ 154
Y + + LG G FG L T T A K I R+L+ K D ++REI ++ L
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFI-SRQLLKKSDMHMRVEREISYLKLLR-H 68
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
+I++ + +V+E +GGELFD I+ + TE + I+ + +CH
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRS 272
++HRDLKPEN LL D +K DFGLS + +G + GS Y APEV+ +
Sbjct: 128 KIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIF---DAILKGGVDFESEPWLLISDSAKD 329
G E+DVWS G++LY++L G PF E +F ++ + DF +S A+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQS 237
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWM 354
L+R+M++ DP +RIT E+ PW
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 12/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K++G G FG+ L + + A K I + + ++ E++KREI + H S +
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI--INHRSLRH 73
Query: 156 -NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV F+ + +VME SGGELF++I G ++E A + +++ V +CH M
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
V HRDLK EN LL + LK DFG S + VG+ Y+APEV L++ Y
Sbjct: 134 QVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLLISDSAKDL 330
GK DVWS GV LY++L G PF E F + V + ++ IS + L
Sbjct: 193 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 252
Query: 331 VRKMLIQDPKKRITSAEVLEHPWM 354
+ ++ + DP KRI+ E+ H W
Sbjct: 253 ISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 12/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K++G G FG+ L + + A K I + + ++ E++KREI + H S +
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI--INHRSLRH 74
Query: 156 -NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV F+ + +VME SGGELF++I G ++E A + +++ V +CH M
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
V HRDLK EN LL + LK FG S +D VG+ Y+APEV L++ Y
Sbjct: 135 QVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLLISDSAKDL 330
GK DVWS GV LY++L G PF E F + V + ++ IS + L
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 331 VRKMLIQDPKKRITSAEVLEHPWM 354
+ ++ + DP KRI+ E+ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 141/261 (54%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V ++ E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D +K TDFGL+ + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGLAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 140/261 (53%), Gaps = 10/261 (3%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ +G+ LG+G+FG YL E + A K + K ++ + ++REI+I HL
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HP 83
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
NI+ + DR+ ++L++E GEL+ ++ + E+ A + + + + +CH
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RSYG 274
V+HRD+KPEN LL K + DFG SV + + + G+ Y+ PE++ R +
Sbjct: 144 VIHRDIKPENLLLGLKGELKI---ADFGWSVHAPSLR-RKTMCGTLDYLPPEMIEGRMHN 199
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKM 334
+++D+W GV+ Y LL G PPF + + + I+K + F + + A+DL+ K+
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS----VPTGAQDLISKL 255
Query: 335 LIQDPKKRITSAEVLEHPWMR 355
L +P +R+ A+V HPW+R
Sbjct: 256 LRHNPSERLPLAQVSAHPWVR 276
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D +K TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWF 298
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 141/261 (54%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V ++ E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D ++ TDFGL+ + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGLAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 135/264 (51%), Gaps = 12/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K++G G FG+ L + + A K I + + ++ E++KREI + H S +
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI--INHRSLRH 74
Query: 156 -NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV F+ + +VME SGGELF++I G ++E A + +++ V +CH M
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
V HRDLK EN LL + LK FG S + VG+ Y+APEV L++ Y
Sbjct: 135 QVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLLISDSAKDL 330
GK DVWS GV LY++L G PF E F + V + ++ IS + L
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 331 VRKMLIQDPKKRITSAEVLEHPWM 354
+ ++ + DP KRI+ E+ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 134/264 (50%), Gaps = 12/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K++G G FG+ L + + A K I + + + ++KREI + H S +
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA----NVKREI--INHRSLRH 74
Query: 156 -NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV F+ + +VME SGGELF++I G ++E A + +++ V +CH M
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
V HRDLK EN LL + LK DFG S + VG+ Y+APEV L++ Y
Sbjct: 135 QVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLLISDSAKDL 330
GK DVWS GV LY++L G PF E F + V + ++ IS + L
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 331 VRKMLIQDPKKRITSAEVLEHPWM 354
+ ++ + DP KRI+ E+ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D +K TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 98
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 269
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 126
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 297
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LAGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 154/286 (53%), Gaps = 20/286 (6%)
Query: 82 ETVLGKPLEDIR-QFYTLGKELGRGQFGITYLC---TENSTGNSYACKSILKRKLV-NKQ 136
ET + + E IR + + L + LG+G +G + T +TG +A K + K +V N +
Sbjct: 4 ETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK 63
Query: 137 DREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
D K E I++ + IV+ A++ ++L++E SGGELF ++ +G + E
Sbjct: 64 DTAHTKAERNILEEVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT 122
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYR 255
A I + H H G+++RDLKPEN +L+++ +K TDFGL I +G V
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFGLCKESIHDGTVTH 179
Query: 256 DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD 314
G+ Y+APE+L RS + + +D WS G ++Y +L+G PPF E K D ILK ++
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRI-----TSAEVLEHPWMR 355
P+L + A+DL++K+L ++ R+ + EV HP+ R
Sbjct: 240 L--PPYL--TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 154/286 (53%), Gaps = 20/286 (6%)
Query: 82 ETVLGKPLEDIR-QFYTLGKELGRGQFGITYLC---TENSTGNSYACKSILKRKLV-NKQ 136
ET + + E IR + + L + LG+G +G + T +TG +A K + K +V N +
Sbjct: 4 ETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAK 63
Query: 137 DREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
D K E I++ + IV+ A++ ++L++E SGGELF ++ +G + E
Sbjct: 64 DTAHTKAERNILEEVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT 122
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYR 255
A I + H H G+++RDLKPEN +L+++ +K TDFGL I +G V
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFGLCKESIHDGTVTH 179
Query: 256 DIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVD 314
G+ Y+APE+L RS + + +D WS G ++Y +L+G PPF E K D ILK ++
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRI-----TSAEVLEHPWMR 355
P+L + A+DL++K+L ++ R+ + EV HP+ R
Sbjct: 240 L--PPYL--TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLPNGVNDIKNHKWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LXGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTW-TLCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 92
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 153 DLKPENLLI---DEQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 207
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 263
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 264 LTKRFGNLKNGVNDIKNHKWF 284
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 98
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G + E A IV + H + +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 269
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 123/243 (50%), Gaps = 30/243 (12%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGH 191
QD +RE+++ S +IV YE+ R+ + +VME GGELF +I +G
Sbjct: 52 QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 111
Query: 192 --YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
+TE+ A+ + ++I + + H + + HRD+KPEN L ++K A+LK TDFG
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF----- 166
Query: 250 EGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVPPFWAE----TEKGIF 305
A E Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 167 ---------------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 211
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
I G +F + W +S+ K L+R +L +P +R+T E + HPW+ + + P+
Sbjct: 212 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271
Query: 366 GSA 368
++
Sbjct: 272 HTS 274
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 91
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 152 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTW-TLCGTPEYLAPEIILSKGYNKAVD 206
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 207 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 262
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 263 LTKRFGNLKDGVNDIKNHKWF 283
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 171/328 (52%), Gaps = 25/328 (7%)
Query: 52 QPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY 111
+PP +PQ +P++ + + + V P G P + F +G+ G GI
Sbjct: 40 KPPGPRSPQREPQRVSHEQFRAALQLVVDP----GDPRSYLDNFIKIGE----GSTGIVC 91
Query: 112 LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
+ T S+G A K + RK +Q RE + E+ IM+ +N+VE +Y +
Sbjct: 92 IATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 147
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231
+VME GG L D I+ E+ AA+C A++ + H GV+HRD+K ++ LL++
Sbjct: 148 VVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH- 205
Query: 232 DGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYIL 289
DG +K +DFG + E + +VG+ Y++APE++ R YG E+D+WS G+++ +
Sbjct: 206 DG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 290 LSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
+ G PP++ E I + + + +S S K + ++L++DP +R T+AE+L
Sbjct: 264 VDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322
Query: 350 EHPWMREGGEASDKPIGSAVLSRMKQFR 377
+HP++ + G ++++ M+Q R
Sbjct: 323 KHPFLAKAGPP------ASIVPLMRQNR 344
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G + E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 134/264 (50%), Gaps = 12/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K++G G FG+ L + A K I + + ++ E++KREI + H S +
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREI--INHRSLRH 74
Query: 156 -NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV F+ + +VME SGGELF++I G ++E A + +++ V + H M
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
V HRDLK EN LL + LK DFG S + VG+ Y+APEV L++ Y
Sbjct: 135 QVAHRDLKLENTLL-DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLLISDSAKDL 330
GK DVWS GV LY++L G PF E F + V + ++ IS + L
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 331 VRKMLIQDPKKRITSAEVLEHPWM 354
+ ++ + DP KRI+ E+ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G + E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D +K TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G + E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 126
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G + E A IV + H + +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 297
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G + E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G + E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN +A K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN +A K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN +A K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G + E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 100
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G + E A IV + H + +++R
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 161 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 215
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 271
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 272 LTKRFGNLKNGVNDIKNHKWF 292
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G + E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 171/328 (52%), Gaps = 25/328 (7%)
Query: 52 QPPKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY 111
+PP +PQ +P++ + + + V P G P + F +G+ G GI
Sbjct: 117 KPPGPRSPQREPQRVSHEQFRAALQLVVDP----GDPRSYLDNFIKIGE----GSTGIVC 168
Query: 112 LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
+ T S+G A K + RK +Q RE + E+ IM+ +N+VE +Y +
Sbjct: 169 IATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 224
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231
+VME GG L D I+ E+ AA+C A++ + H GV+HRD+K ++ LL++
Sbjct: 225 VVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH- 282
Query: 232 DGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYIL 289
DG +K +DFG + E + +VG+ Y++APE++ R YG E+D+WS G+++ +
Sbjct: 283 DG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
Query: 290 LSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
+ G PP++ E I + + + +S S K + ++L++DP +R T+AE+L
Sbjct: 341 VDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 399
Query: 350 EHPWMREGGEASDKPIGSAVLSRMKQFR 377
+HP++ + G ++++ M+Q R
Sbjct: 400 KHPFLAKAGPP------ASIVPLMRQNR 421
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G + E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 126
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G + + G+ Y+APE +L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGATW-TLCGTPEYLAPEIILSKGYNKAVD 241
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 297
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLTK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D +K TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLTK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D +K TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 139/261 (53%), Gaps = 20/261 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENS---TGNSYACKSILKRKLVNK-QDREDIKREIQIMQHL 151
+ L K LG G +G +L + S TG YA K + K +V K + E + E Q+++H+
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
+V A++ +HL+++ +GGELF + + +TE IV + H
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYRDIVGSAYYVAPEVL 269
H +G+++RD+K EN LL D + TDFGLS DE + D G+ Y+AP+++
Sbjct: 176 HKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 270 R---RSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLL 322
R + K +D WS GV++Y LL+G PF + EK I ILK + E
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE---- 288
Query: 323 ISDSAKDLVRKMLIQDPKKRI 343
+S AKDL++++L++DPKKR+
Sbjct: 289 MSALAKDLIQRLLMKDPKKRL 309
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D +K DFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L TGN YA K + K+K+V + E E +I+Q ++ + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLTK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GGE+F + G + E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D +K TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN ++ D ++ TDFG + + +G+ + + G+ Y+APE ++ + Y K +D
Sbjct: 166 DLKPENLII---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIIISKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 165/317 (52%), Gaps = 21/317 (6%)
Query: 63 PRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY 122
P+++P + S R + G P + F ++G G GI + T S+G
Sbjct: 4 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI----KIGEGSTGIVCIATVRSSGKLV 59
Query: 123 ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL 182
A K + RK +Q RE + E+ IM+ +N+VE +Y + +VME GG L
Sbjct: 60 AVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 183 FDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
D I+ E+ AA+C A++ + H GV+HRD+K ++ LL++ DG +K +DF
Sbjct: 116 TD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DG--RVKLSDF 171
Query: 243 GLSVFID-EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAET 300
G + E + +VG+ Y++APE++ R YG E+D+WS G+++ ++ G PP++ E
Sbjct: 172 GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 231
Query: 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
I + + + +S S K + ++L++DP +R T+AE+L+HP++ + G
Sbjct: 232 PLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 290
Query: 361 SDKPIGSAVLSRMKQFR 377
++++ M+Q R
Sbjct: 291 ------ASIVPLMRQNR 301
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 165/317 (52%), Gaps = 21/317 (6%)
Query: 63 PRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSY 122
P+++P + S R + G P + F +G+ G GI + T S+G
Sbjct: 2 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGE----GSTGIVCIATVRSSGKLV 57
Query: 123 ACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL 182
A K + RK +Q RE + E+ IM+ +N+VE +Y + +VME GG L
Sbjct: 58 AVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 183 FDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
D I+ E+ AA+C A++ + H GV+HRD+K ++ LL++ DG +K +DF
Sbjct: 114 TD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DG--RVKLSDF 169
Query: 243 GLSVFID-EGKVYRDIVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAET 300
G + E + +VG+ Y++APE++ R YG E+D+WS G+++ ++ G PP++ E
Sbjct: 170 GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 229
Query: 301 EKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
I + + + +S S K + ++L++DP +R T+AE+L+HP++ + G
Sbjct: 230 PLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 288
Query: 361 SDKPIGSAVLSRMKQFR 377
++++ M+Q R
Sbjct: 289 ------ASIVPLMRQNR 299
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+AP +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPAIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 131/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F T L E +T YA K + KR ++ + + RE +M L
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 263
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
K + ++ H W
Sbjct: 277 LTKAFGNLKNGVNDIKNHKWF 297
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 17/289 (5%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D R + ++G G GI + T S+G A K + RK +Q RE + E+ IM+
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 73
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+N+VE +Y + +VME GG L D I+ E+ AA+C A++ +
Sbjct: 74 YQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 131
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL 269
H GV+HRD+K ++ LL++ DG +K +DFG + E + +VG+ Y++APE++
Sbjct: 132 LHAQGVIHRDIKSDSILLTH-DG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 270 RR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R YG E+D+WS G+++ ++ G PP++ E I + + + +S S K
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 247
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR 377
+ ++L++DP +R T+AE+L+HP++ + G ++++ M+Q R
Sbjct: 248 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPP------ASIVPLMRQNR 290
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+ LG G FG L TGN YA K + K+K+V + E E +I Q ++ +V+
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFP-FLVK 106
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++V+E GGE+F + G ++E A IV + H + +++R
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D +K DFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 17/289 (5%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D R + ++G G GI + T S+G A K + RK +Q RE + E+ IM+
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 77
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+N+VE +Y + +VME GG L D I+ E+ AA+C A++ +
Sbjct: 78 YQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 135
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL 269
H GV+HRD+K ++ LL++ DG +K +DFG + E + +VG+ Y++APE++
Sbjct: 136 LHAQGVIHRDIKSDSILLTH-DG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 270 RR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R YG E+D+WS G+++ ++ G PP++ E I + + + +S S K
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 251
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR 377
+ ++L++DP +R T+AE+L+HP++ + G ++++ M+Q R
Sbjct: 252 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPP------ASIVPLMRQNR 294
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 147/304 (48%), Gaps = 12/304 (3%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
MSA +P +P + P+++ VL P R Y G+ LG+G F Y T+
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKR--YMRGRFLGKGGFAKCYEITD 63
Query: 116 NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
T +A K + K L+ +E + EI I + L ++V F G +ED V++V+E
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLE 122
Query: 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235
+C L + + TE A R + V + H V+HRDLK N L N D
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL-NDDMD- 180
Query: 236 MLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGV 293
+K DFGL+ I+ +G+ +D+ G+ Y+APEVL ++ + E+D+WS G ILY LL G
Sbjct: 181 -VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 294 PPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
PPF K + I K I+ A L+R+ML DP R + AE+L +
Sbjct: 240 PPFETSCLKETYIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVAELLTDEF 295
Query: 354 MREG 357
G
Sbjct: 296 FTSG 299
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GG++F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D +K DFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G FG L TGN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME GG++F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D +K DFG + + +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG G FG L +GN YA K + K+K+V + E E +I+Q ++ +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVK 105
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++D ++++VME +GGE+F + G ++E A IV + H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE-VLRRSYGKEID 278
DLKPEN L+ D ++ TDFG + + +G+ + + G+ +APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEALAPEIILSKGYNKAVD 220
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQD 338
W+ GV++Y + +G PPF+A+ I++ I+ G V F S S KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 339 PKKRITSA-----EVLEHPWM 354
KR + ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 154 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 266
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 70
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 131 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 243
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 244 EKLLVLDATKRLGCEEM 260
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 95
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 156 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAA----FFPKARDLV 268
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 269 EKLLVLDATKRLGCEEM 285
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 69
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 130 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 242
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 243 EKLLVLDATKRLGCEEM 259
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 148/268 (55%), Gaps = 27/268 (10%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM---QHLSGQQNI 157
++G G GI L E +G A K + RK +Q RE + E+ IM QH N+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHF----NV 104
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
VE +Y + + ++ME GG L D I++Q E+ A +C A++ + + H GV+
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLRRS-YGK 275
HRD+K ++ LL+ DG +K +DFG I + R +VG+ Y++APEV+ RS Y
Sbjct: 164 HRDIKSDSILLT-LDGR--VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 276 EIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL-----ISDSAKDL 330
E+D+WS G+++ ++ G PP+++++ + +S P L +S +D
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR------DSPPPKLKNSHKVSPVLRDF 274
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREGG 358
+ +ML++DP++R T+ E+L+HP++ + G
Sbjct: 275 LERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 154 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 266
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 265
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 263
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 263
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 265
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 265
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 129 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 241
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 242 EKLLVLDATKRLGCEEM 258
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 97
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 158 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 270
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 271 EKLLVLDATKRLGCEEM 287
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 67
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 128 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 240
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 241 EKLLVLDATKRLGCEEM 257
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 263
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 150 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 262
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 15/287 (5%)
Query: 83 TVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK 142
T +G+ +ED + +G LG+G F Y TG A K I K+ + + ++
Sbjct: 4 TCIGEKIEDFK----VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ 59
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALC 201
E++I L +I+E +ED V+LV+E+C GE+ + + ++E A
Sbjct: 60 NEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM 118
Query: 202 RAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGS 260
I+ + + H G++HRDL N LL+ +K DFGL+ + + + + G+
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGT 175
Query: 261 AYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319
Y++PE+ RS +G E DVWS G + Y LL G PPF +T K + ++ D+E
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPS 233
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
+L I AKDL+ ++L ++P R++ + VL+HP+M K G
Sbjct: 234 FLSI--EAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK----FFPKARDLV 265
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 150 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 262
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 74
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 135 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 247
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 248 EKLLVLDATKRLGCEEM 264
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + GEL I G + E IV+ + + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK----FFPKARDLV 265
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 25/293 (8%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D R++ ++G G GI + TE TG A K + RK +Q RE + E+ IM+
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRD 98
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
N+V+ +Y + +VME GG L D I+ E+ A +C +++ + +
Sbjct: 99 YH-HDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSY 156
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL 269
H GV+HRD+K ++ LL++ DG +K +DFG + E + +VG+ Y++APEV+
Sbjct: 157 LHNQGVIHRDIKSDSILLTS-DG--RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI 213
Query: 270 RR-SYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLIS 324
R YG E+D+WS G+++ ++ G PP++ E + I D++ D +S
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHK-----VS 268
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFR 377
+ + ML+++P +R T+ E+L HP+++ G S ++ M+Q+R
Sbjct: 269 SVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPP------SCIVPLMRQYR 315
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 146/304 (48%), Gaps = 12/304 (3%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
MSA +P +P + P+++ VL P R Y G+ LG+G F Y T+
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKR--YMRGRFLGKGGFAKCYEITD 63
Query: 116 NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
T +A K + K L+ +E + EI I + L ++V F G +ED V++V+E
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLE 122
Query: 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235
+C L + + TE A R + V + H V+HRDLK N L++
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-- 180
Query: 236 MLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGV 293
+K DFGL+ I+ +G+ + + G+ Y+APEVL ++ + E+D+WS G ILY LL G
Sbjct: 181 -VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 294 PPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
PPF K + I K I+ A L+R+ML DP R + AE+L +
Sbjct: 240 PPFETSCLKETYIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVAELLTDEF 295
Query: 354 MREG 357
G
Sbjct: 296 FTSG 299
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 12/304 (3%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
MSA +P +P + P+++ VL P R Y G+ LG+G F Y T+
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKR--YMRGRFLGKGGFAKCYEITD 63
Query: 116 NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
T +A K + K L+ +E + EI I + L ++V F G +ED V++V+E
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLE 122
Query: 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235
+C L + + TE A R + V + H V+HRDLK N L N D
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL-NDDMD- 180
Query: 236 MLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGV 293
+K DFGL+ I+ +G+ + + G+ Y+APEVL ++ + E+D+WS G ILY LL G
Sbjct: 181 -VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 294 PPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
PPF K + I K I+ A L+R+ML DP R + AE+L +
Sbjct: 240 PPFETSCLKETYIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVAELLTDEF 295
Query: 354 MREG 357
G
Sbjct: 296 FTSG 299
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ GK LG G F L E +T YA K + KR ++ + + RE +M L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
V+ ++D + ++ + G L I G + E IV+ + + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR--DIVGSAYYVAPEVL-RR 271
++HRDLKPEN LL N+D ++ TDFG + V E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL-NED--MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
S K D+W+ G I+Y L++G+PPF A E IF I+K DF + A+DLV
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLV 265
Query: 332 RKMLIQDPKKRITSAEV 348
K+L+ D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 135/269 (50%), Gaps = 16/269 (5%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
Q + + + LG G FG +L G YA K +LK+++V + + + + ++M +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMK-VLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
I+ G ++D Q + ++M+ GGELF + + A + + + H
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR-RS 272
+++RDLKPEN LL D +K TDFG + ++ + V + G+ Y+APEV+ +
Sbjct: 125 KDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEVVSTKP 179
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVR 332
Y K ID WS G+++Y +L+G PF+ ++ IL + F ++ KDL+
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLLS 235
Query: 333 KMLIQDPKKRI-----TSAEVLEHPWMRE 356
+++ +D +R+ + +V HPW +E
Sbjct: 236 RLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 143/293 (48%), Gaps = 13/293 (4%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P+ S S P+++ VL P R Y G+ LG+G F Y T+ T +A K
Sbjct: 2 PLGSDPKSA-PLKEIPDVLVDPRTMKR--YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV 58
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI 186
+ K L+ +E + EI I + L ++V F G +ED V++V+E+C L +
Sbjct: 59 VPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELH 117
Query: 187 IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
+ TE A R + V + H V+HRDLK N L++ +K DFGL+
Sbjct: 118 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD---MDVKIGDFGLAT 174
Query: 247 FID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGI 304
I+ +G+ +D+ G+ Y+APEVL ++ + E+D+WS G ILY LL G PPF K
Sbjct: 175 KIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 234
Query: 305 FDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
+ I K I+ A L+R+ML DP R + AE+L + G
Sbjct: 235 YIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 12/264 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y K++G G FG+ L + T A K I + ++ E+++REI + H S +
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREI--INHRSLRH 75
Query: 156 -NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
NIV F+ + ++ME SGGEL+++I G ++E A + +++ V +CH M
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
+ HRDLK EN LL + LK DFG S + VG+ Y+APEV LR+ Y
Sbjct: 136 QICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 274 -GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG--GVDFESEPWLLISDSAKDL 330
GK DVWS GV LY++L G PF E + ++ V + + IS L
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254
Query: 331 VRKMLIQDPKKRITSAEVLEHPWM 354
+ ++ + DP RI+ E+ H W
Sbjct: 255 ISRIFVADPATRISIPEIKTHSWF 278
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 139/262 (53%), Gaps = 15/262 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 72
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 132
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 133 DIKLENLML-DKDGH--IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 189
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 190 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 245
Query: 338 DPKKRI-----TSAEVLEHPWM 354
DPK+R+ + EV+EH +
Sbjct: 246 DPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 139/262 (53%), Gaps = 15/262 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML-DKDGH--IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 338 DPKKRI-----TSAEVLEHPWM 354
DPK+R+ + EV+EH +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 139/262 (53%), Gaps = 15/262 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML-DKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 338 DPKKRI-----TSAEVLEHPWM 354
DPK+R+ + EV+EH +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 74
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 134
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 135 DIKLENLML-DKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 247
Query: 338 DPKKRI-----TSAEVLEH 351
DPK+R+ + EV+EH
Sbjct: 248 DPKQRLGGGPSDAKEVMEH 266
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML-DKDGH--IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 338 DPKKRI-----TSAEVLEH 351
DPK+R+ + EV+EH
Sbjct: 243 DPKQRLGGGPSDAKEVMEH 261
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML-DKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 338 DPKKRI-----TSAEVLEH 351
DPK+R+ + EV+EH
Sbjct: 243 DPKQRLGGGPSDAKEVMEH 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 139/262 (53%), Gaps = 15/262 (5%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K ++ K + E +++Q+ + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+ A++ + VME +GGELF + + +TE+ A IV+ + + H V++R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEI 277
D+K EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML-DKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W GV++Y ++ G PF+ + + +F+ IL + F +S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 338 DPKKRI-----TSAEVLEHPWM 354
DPK+R+ + EV+EH +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 63
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 124 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 239
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 240 LHKILVENPSARITIPDIKKDRW 262
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P+ ++ + K + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLN-PWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G +G L T + A K + ++ V+ E+IK+EI I L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINAMLN-HE 65
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 126 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G F + ++ T +A K + K L+ RE + EI I + L+ Q++V F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 87
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
G +ED V +V+ELC L + + TE A R IV + H V+HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K N L N+D +K DFGL+ ++ +G+ + + G+ Y+APEVL ++ + E+DV
Sbjct: 148 KLGNLFL-NED--LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS G I+Y LL G PPF K + I K I+ A L++KML DP
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 260
Query: 340 KKRITSAEVLEHPWMREGGEASDKPI 365
R T E+L + G + PI
Sbjct: 261 TARPTINELLNDEFFTSGYIPARLPI 286
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G F + ++ T +A K + K L+ RE + EI I + L+ Q++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 83
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
G +ED V +V+ELC L + + TE A R IV + H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K N L N+D +K DFGL+ ++ +G+ + + G+ Y+APEVL ++ + E+DV
Sbjct: 144 KLGNLFL-NED--LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS G I+Y LL G PPF K + I K I+ A L++KML DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 256
Query: 340 KKRITSAEVLEHPWMREGGEASDKPI 365
R T E+L + G + PI
Sbjct: 257 TARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G F + ++ T +A K + K L+ RE + EI I + L+ Q++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 83
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
G +ED V +V+ELC L + + TE A R IV + H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K N L N+D +K DFGL+ ++ +G+ + + G+ Y+APEVL ++ + E+DV
Sbjct: 144 KLGNLFL-NED--LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS G I+Y LL G PPF K + I K I+ A L++KML DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 256
Query: 340 KKRITSAEVLEHPWMREGGEASDKPI 365
R T E+L + G + PI
Sbjct: 257 TARPTINELLNDEFFTSGYIPARLPI 282
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ L + LG G G L T + A K + ++ V+ E+IK+EI I + L+ +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN-HE 64
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
N+V+F G + +L +E CSGGELFD+I E A ++ V + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FIDEGKVYRDIVGSAYYVAPEVLRRS 272
+ HRD+KPEN LL +D LK +DFGL+ + + ++ + G+ YVAPE+L+R
Sbjct: 125 ITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 273 --YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + +DVWS G++L +L+G P W + + PW I + L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 331 VRKMLIQDPKKRITSAEVLEHPW 353
+ K+L+++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G F + ++ T +A K + K L+ RE + EI I + L+ Q++V F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 107
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
G +ED V +V+ELC L + + TE A R IV + H V+HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K N L N+D +K DFGL+ ++ +G+ + + G+ Y+APEVL ++ + E+DV
Sbjct: 168 KLGNLFL-NED--LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS G I+Y LL G PPF K + I K I+ A L++KML DP
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 280
Query: 340 KKRITSAEVLEHPWMREGGEASDKPI 365
R T E+L + G + PI
Sbjct: 281 TARPTINELLNDEFFTSGYIPARLPI 306
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G F + ++ T +A K + K L+ RE + EI I + L+ Q++V F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 105
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
G +ED V +V+ELC L + + TE A R IV + H V+HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K N L N+D +K DFGL+ ++ +G+ + + G+ Y+APEVL ++ + E+DV
Sbjct: 166 KLGNLFL-NED--LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS G I+Y LL G PPF K + I K I+ A L++KML DP
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 278
Query: 340 KKRITSAEVLEHPWMREGGEASDKPI 365
R T E+L + G + PI
Sbjct: 279 TARPTINELLNDEFFTSGYIPARLPI 304
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G F + ++ T +A K + K L+ RE + EI I + L+ Q++V F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 81
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
G +ED V +V+ELC L + + TE A R IV + H V+HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 222 KPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K N L N+D +K DFGL+ ++ +G+ + + G+ Y+APEVL ++ + E+DV
Sbjct: 142 KLGNLFL-NED--LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
WS G I+Y LL G PPF K + I K I+ A L++KML DP
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 254
Query: 340 KKRITSAEVLEHPWMREGGEASDKPI 365
R T E+L + G + PI
Sbjct: 255 TARPTINELLNDEFFTSGYIPARLPI 280
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 19/291 (6%)
Query: 71 SATSTRPVQKPETVLGKPLEDI--RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSIL 128
S + ++ E L KP + +F L K LG+G FG L E +TG YA K +
Sbjct: 127 SPSDNSGAEEMEVSLAKPKHRVTMNEFEYL-KLLGKGTFGKVILVKEKATGRYYAMKILK 185
Query: 129 KRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA 188
K +V K + E +++Q+ S + + +++ + VME +GGELF +
Sbjct: 186 KEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 244
Query: 189 QGHYTEKAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV- 246
+ ++E A IV+ + + H V++RDLK EN +L +KDG +K TDFGL
Sbjct: 245 ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML-DKDG--HIKITDFGLCKE 301
Query: 247 FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIF 305
I +G + G+ Y+APEVL YG+ +D W GV++Y ++ G PF+ + + +F
Sbjct: 302 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 361
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRI-----TSAEVLEH 351
+ IL + F + AK L+ +L +DPK+R+ + E+++H
Sbjct: 362 ELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 132/253 (52%), Gaps = 14/253 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNS---YACKSILKRKLVNKQDREDIKREIQIMQHLS 152
+ L K LG+G FG +L + S ++ YA K +LK+ + +DR K E I+ ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEVN 84
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
IV+ A++ ++L+++ GG+LF ++ + +TE+ + + H H
Sbjct: 85 -HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-R 270
+G+++RDLKPEN LL D +K TDFGLS ID K G+ Y+APEV+ R
Sbjct: 144 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
R + + D WS GV+++ +L+G PF + K ILK + +S A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 256
Query: 331 VRKMLIQDPKKRI 343
+R + ++P R+
Sbjct: 257 LRMLFKRNPANRL 269
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 144/280 (51%), Gaps = 19/280 (6%)
Query: 82 ETVLGKPLEDI--RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE 139
E L KP + +F L K LG+G FG L E +TG YA K + K +V K +
Sbjct: 135 EVSLAKPKHRVTMNEFEYL-KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA 193
Query: 140 DIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA 199
E +++Q+ S + + +++ + VME +GGELF + + ++E A
Sbjct: 194 HTLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 252
Query: 200 LCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDI 257
IV+ + + H V++RDLK EN +L +KDG +K TDFGL I +G +
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLML-DKDG--HIKITDFGLCKEGIKDGATMKTF 309
Query: 258 VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFE 316
G+ Y+APEVL YG+ +D W GV++Y ++ G PF+ + + +F+ IL + F
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 369
Query: 317 SEPWLLISDSAKDLVRKMLIQDPKKRI-----TSAEVLEH 351
+ AK L+ +L +DPK+R+ + E+++H
Sbjct: 370 R----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 16/260 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K +V K + E +++Q+ S +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 74
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMH 218
+ +++ + VME +GGELF + + ++E A IV+ + + H V++
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 134
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKE 276
RDLK EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 135 RDLKLENLML-DKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
+D W GV++Y ++ G PF+ + + +F+ IL + F + AK L+ +L
Sbjct: 192 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 247
Query: 337 QDPKKRI-----TSAEVLEH 351
+DPK+R+ + E+++H
Sbjct: 248 KDPKQRLGGGSEDAKEIMQH 267
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 16/260 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K +V K + E +++Q+ S +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 72
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMH 218
+ +++ + VME +GGELF + + ++E A IV+ + + H V++
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKE 276
RDLK EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 133 RDLKLENLML-DKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
+D W GV++Y ++ G PF+ + + +F+ IL + F + AK L+ +L
Sbjct: 190 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 245
Query: 337 QDPKKRI-----TSAEVLEH 351
+DPK+R+ + E+++H
Sbjct: 246 KDPKQRLGGGSEDAKEIMQH 265
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 132/253 (52%), Gaps = 14/253 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNS---YACKSILKRKLVNKQDREDIKREIQIMQHLS 152
+ L K LG+G FG +L + S ++ YA K +LK+ + +DR K E I+ ++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEVN 85
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
IV+ A++ ++L+++ GG+LF ++ + +TE+ + + H H
Sbjct: 86 -HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-R 270
+G+++RDLKPEN LL D +K TDFGLS ID K G+ Y+APEV+ R
Sbjct: 145 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
R + + D WS GV+++ +L+G PF + K ILK + +S A+ L
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 257
Query: 331 VRKMLIQDPKKRI 343
+R + ++P R+
Sbjct: 258 LRMLFKRNPANRL 270
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 132/253 (52%), Gaps = 14/253 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNS---YACKSILKRKLVNKQDREDIKREIQIMQHLS 152
+ L K LG+G FG +L + S ++ YA K +LK+ + +DR K E I+ ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEVN 84
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
IV+ A++ ++L+++ GG+LF ++ + +TE+ + + H H
Sbjct: 85 -HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-R 270
+G+++RDLKPEN LL D +K TDFGLS ID K G+ Y+APEV+ R
Sbjct: 144 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
R + + D WS GV+++ +L+G PF + K ILK + +S A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 256
Query: 331 VRKMLIQDPKKRI 343
+R + ++P R+
Sbjct: 257 LRMLFKRNPANRL 269
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 16/260 (6%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K LG+G FG L E +TG YA K + K +V K + E +++Q+ S +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 73
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF-MGVMH 218
+ +++ + VME +GGELF + + ++E A IV+ + + H V++
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKE 276
RDLK EN +L +KDG +K TDFGL I +G + G+ Y+APEVL YG+
Sbjct: 134 RDLKLENLML-DKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 277 IDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLI 336
+D W GV++Y ++ G PF+ + + +F+ IL + F + AK L+ +L
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 246
Query: 337 QDPKKRI-----TSAEVLEH 351
+DPK+R+ + E+++H
Sbjct: 247 KDPKQRLGGGSEDAKEIMQH 266
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 139/271 (51%), Gaps = 18/271 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K +GRG FG L ++ YA K + K +++ + D E IM +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 135
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ A++D + +++VME GG+L + +++ EK A +V + H MG
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDI-VGSAYYVAPEVLRRS- 272
++HRD+KP+N LL D LK DFG + +DE G V+ D VG+ Y++PEVL+
Sbjct: 195 LIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 273 ----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDS 326
YG+E D WS GV L+ +L G PF+A++ G + I+ K + F + IS
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDA--EISKH 309
Query: 327 AKDLVRKMLIQDPKK--RITSAEVLEHPWMR 355
AK+L+ L + R E+ +HP+ +
Sbjct: 310 AKNLICAFLTDREVRLGRNGVEEIKQHPFFK 340
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 14/256 (5%)
Query: 96 YTLGKELGRGQFGITYLC---TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
+ L K LG+G FG +L T +G+ YA K +LK+ + +DR K E I+ ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVRDRVRTKMERDILADVN 88
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+V+ A++ ++L+++ GG+LF ++ + +TE+ + + H H
Sbjct: 89 -HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-R 270
+G+++RDLKPEN LL D +K TDFGLS ID K G+ Y+APEV+ R
Sbjct: 148 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL 330
+ + D WS GV+++ +L+G PF + K ILK + +S A+ L
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSL 260
Query: 331 VRKMLIQDPKKRITSA 346
+R + ++P R+ S
Sbjct: 261 LRALFKRNPANRLGSG 276
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 139/267 (52%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 73
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR-DIVGSAYYVAPEVL 269
H V+HRD+K +N LL DG +K TDFG I + R ++VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL-SAIFR 247
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +KR ++ E+L+H +++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 73
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H V+HRD+K +N LL DG +K TDFG I + R +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL-SAIFR 247
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +KR ++ E+L+H +++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 73
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H V+HRD+K +N LL DG +K TDFG I + R +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL-SAIFR 247
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +KR ++ E+L+H +++
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 128/249 (51%), Gaps = 16/249 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K +GRG FG L ST YA K + K +++ + D E IM +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 129
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ A++D + +++VME GG+L + +++ EK A +V + H MG
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI-VGSAYYVAPEVLRRS- 272
+HRD+KP+N LL D LK DFG + ++ EG V D VG+ Y++PEVL+
Sbjct: 189 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 273 ----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDS 326
YG+E D WS GV LY +L G PF+A++ G + I+ K + F + IS
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN--DISKE 303
Query: 327 AKDLVRKML 335
AK+L+ L
Sbjct: 304 AKNLICAFL 312
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 128/249 (51%), Gaps = 16/249 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K +GRG FG L ST YA K + K +++ + D E IM +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ A++D + +++VME GG+L + +++ EK A +V + H MG
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI-VGSAYYVAPEVLRRS- 272
+HRD+KP+N LL D LK DFG + ++ EG V D VG+ Y++PEVL+
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 273 ----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDS 326
YG+E D WS GV LY +L G PF+A++ G + I+ K + F + IS
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN--DISKE 308
Query: 327 AKDLVRKML 335
AK+L+ L
Sbjct: 309 AKNLICAFL 317
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 128/249 (51%), Gaps = 16/249 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + K +GRG FG L ST YA K + K +++ + D E IM +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ A++D + +++VME GG+L + +++ EK A +V + H MG
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDI-VGSAYYVAPEVLRRS- 272
+HRD+KP+N LL D LK DFG + ++ EG V D VG+ Y++PEVL+
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 273 ----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--KGGVDFESEPWLLISDS 326
YG+E D WS GV LY +L G PF+A++ G + I+ K + F + IS
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN--DISKE 308
Query: 327 AKDLVRKML 335
AK+L+ L
Sbjct: 309 AKNLICAFL 317
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 74
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H V+HRD+K +N LL DG +K TDFG I + R +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRDIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL-SAIFR 248
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +KR ++ E+++H +++
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 9/246 (3%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G+G FG L + YA K + K+ ++ K++ + I E ++ +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
+++ ++ V++ +GGELF + + + E A I + + + H + +++R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-RRSYGKEI 277
DLKPEN LL D + TDFGL I+ G+ Y+APEVL ++ Y + +
Sbjct: 164 DLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTV 220
Query: 278 DVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQ 337
D W G +LY +L G+PPF++ ++D IL + + I++SA+ L+ +L +
Sbjct: 221 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN----ITNSARHLLEGLLQK 276
Query: 338 DPKKRI 343
D KR+
Sbjct: 277 DRTKRL 282
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 17/273 (6%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ + + ++LG G +G Y TG A K + + D ++I +EI IMQ
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-----PVESDLQEIIKEISIMQQCDS 83
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCH 212
++V++ G+Y + +VME C G + D I + TE A + ++ + + + H
Sbjct: 84 P-HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLRR 271
FM +HRD+K N LL N +G A K DFG++ + + R+ ++G+ +++APEV++
Sbjct: 143 FMRKIHRDIKAGNILL-NTEGHA--KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 272 -SYGKEIDVWSAGVILYILLSGVPPFW-AETEKGIFDAILKGGVDF-ESEPWLLISDSAK 328
Y D+WS G+ + G PP+ + IF F + E W SD+
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW---SDNFT 256
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEAS 361
D V++ L++ P++R T+ ++L+HP++R S
Sbjct: 257 DFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D ++ YT +++G+G G Y + +TG A + + L + +E I EI +M+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 74
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ NIV + +Y + +VME +GG L D ++ + E AA+CR + +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H V+HR++K +N LL DG +K TDFG I + R +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRNIKSDNILLG-MDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R++YG ++D+WS G++ ++ G PP+ E I G P L S +
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL-SAIFR 248
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMR 355
D + + L D +KR ++ E+++H +++
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 15/263 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L TG+ YA K + K ++ D E E +I+ + +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ + VME +GG+L I + E A I++ + H G+++RDL
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDL 150
Query: 222 KPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDV 279
K +N LL D K DFG+ I G G+ Y+APE+L+ YG +D
Sbjct: 151 KLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDW 207
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L G PF AE E +F+AIL V + + WL + A +++ + ++P
Sbjct: 208 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--WL--HEDATGILKSFMTKNP 263
Query: 340 KKRITSAE------VLEHPWMRE 356
R+ S +L HP+ +E
Sbjct: 264 TMRLGSLTQGGEHAILRHPFFKE 286
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 37/289 (12%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNK-------------------- 135
YTL E+G+G +G+ L + YA K + K+KL+ +
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 136 QDR---EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL--VMELCSGGELFDKIIAQG 190
Q R E + +EI I++ L N+V+ +D HL V EL + G + + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLK 132
Query: 191 HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FID 249
+E A + ++ + + H+ ++HRD+KP N LL +DG +K DFG+S F
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN-LLVGEDG--HIKIADFGVSNEFKG 189
Query: 250 EGKVYRDIVGSAYYVAPEVL---RRSY-GKEIDVWSAGVILYILLSGVPPFWAETEKGIF 305
+ + VG+ ++APE L R+ + GK +DVW+ GV LY + G PF E +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
I ++F +P I++ KDL+ +ML ++P+ RI E+ HPW+
Sbjct: 250 SKIKSQALEFPDQPD--IAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +++G G FG L G Y K I ++ +K +RE+ +RE+ ++ ++
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMK-HP 83
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCHF 213
NIV++R ++E+ S+++VM+ C GG+LF +I AQ + E I + H H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG-KVYRDIVGSAYYVAPEVL-RR 271
++HRD+K +N L+ KDG L DFG++ ++ ++ R +G+ YY++PE+ +
Sbjct: 144 RKILHRDIKSQNIFLT-KDGTVQL--GDFGIARVLNSTVELARACIGTPYYLSPEICENK 200
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y + D+W+ G +LY L + F A + K + I+ G S L S + LV
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS---LHYSYDLRSLV 257
Query: 332 RKMLIQDPKKRITSAEVLEHPWM 354
++ ++P+ R + +LE ++
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFI 280
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 192
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 246
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 247 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L T YA K + K ++ D E E +++ L + +
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ ++ VME +GG+L I G + E A I + H G+++RDL
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDL 146
Query: 222 KPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K +N +L D +K DFG+ + +G R+ G+ Y+APE++ + YGK +D
Sbjct: 147 KLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDW 203
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L+G PPF E E +F +I++ V + +S A + + ++ + P
Sbjct: 204 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKGLMTKHP 259
Query: 340 KKRITSA-----EVLEHPWMR 355
KR+ +V EH + R
Sbjct: 260 AKRLGCGPEGERDVREHAFFR 280
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 191
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 245
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 246 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 219
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 273
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 274 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 211
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 265
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 266 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGT 204
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 258
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 259 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 192
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 246
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 247 ----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 191
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 245
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 246 ----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGT 219
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 273
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 274 ----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 48 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 224
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 278
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 279 ----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 192
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 246
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 247 ----VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
GTID+ EF++ M R + +E + +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTM-MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE-E 118
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF TMM S
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 204
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I+ G V F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 258
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 259 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I+ G V F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 260 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I+ G V F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 260 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 204
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I+ G V F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 258
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 259 ----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 20/274 (7%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQ 146
E + Y +G LG G FG Y S A K + K ++ + + + R E+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 147 IMQHLS-GQQNIVEFRGAYEDRQSVHLVME-LCSGGELFDKIIAQGHYTEKAAAALCRAI 204
+++ +S G ++ +E S L++E + +LFD I +G E+ A + +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGTRVYS 180
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR---- 230
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 231 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQ 146
E + Y +G LG G FG Y S A K + K ++ + + + R E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 147 IMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAI 204
+++ +S G ++ +E S L++E +LFD I +G E+ A + +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGTRVYS 181
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR---- 231
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 232 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I+ G V F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 260 ----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 205
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I+ G V F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 260 ----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR-- 143
GK E + Y +G LG G FG Y S A K + K ++ + + + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 144 -EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAAL 200
E+ +++ +S G ++ +E S L++E +LFD I +G E+ A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
++ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGT 204
Query: 261 AYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
Y PE +R R +G+ VWS G++LY ++ G PF + E I+ G V F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 258
Query: 319 PWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 259 ----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQ 146
E + Y +G LG G FG Y S A K + K ++ + + + R E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 147 IMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAI 204
+++ +S G ++ +E S L++E +LFD I +G E+ A + +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGTRVYS 181
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR---- 231
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 232 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQ 146
E + Y +G LG G FG Y S A K + K ++ + + + R E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 147 IMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAI 204
+++ +S G ++ +E S L++E +LFD I +G E+ A + +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGTRVYS 181
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR---- 231
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 232 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 79 QKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR 138
Q P +PLE Y +G LG G FG Y S A K + K ++ + +
Sbjct: 19 QGPHMKEKEPLESQ---YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 75
Query: 139 EDIKR---EIQIMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYT 193
+ R E+ +++ +S G ++ +E S L++E +LFD I +G
Sbjct: 76 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 135
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV 253
E+ A + ++ V HCH GV+HRD+K EN L+ G LK DFG + + V
Sbjct: 136 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TV 192
Query: 254 YRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311
Y D G+ Y PE +R R +G+ VWS G++LY ++ G PF + E I++G
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 246
Query: 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
V F +S + L+R L P R T E+ HPWM++
Sbjct: 247 QVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQ 146
E + Y +G LG G FG Y S A K + K ++ + + + R E+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 147 IMQHLS-GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAI 204
+++ +S G ++ +E S L++E +LFD I +G E+ A + +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ V HCH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGTRVYS 180
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
PE +R R +G+ VWS G++LY ++ G PF + E I++G V F
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR---- 230
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+S + L+R L P R T E+ HPWM++
Sbjct: 231 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF TMM S
Sbjct: 121 -EVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 20/268 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHLS 152
Y +G LG G FG Y S A K + K ++ + + + R E+ +++ +S
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 153 -GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
G ++ +E S L++E +LFD I +G E+ A + ++ V H
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
CH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y PE +R
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 185
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R +G+ VWS G++LY ++ G PF + E I++G V F +S +
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR----VSSECQ 235
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
L+R L P R T E+ HPWM++
Sbjct: 236 HLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 20/268 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHLS 152
Y +G LG G FG Y S A K + K ++ + + + R E+ +++ +S
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 153 -GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
G ++ +E S L++E +LFD I +G E+ A + ++ V H
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
CH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R +G+ VWS G++LY ++ G PF + E I++G V F +S +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR----VSSECQ 232
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
L+R L P R T E+ HPWM++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF TMM S
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 20/268 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHLS 152
Y +G LG G FG Y S A K + K ++ + + + R E+ +++ +S
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 153 -GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
G ++ +E S L++E +LFD I +G E+ A + ++ V H
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
CH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y PE +R
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R +G+ VWS G++LY ++ G PF + E I++G V F +S +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR----VSXECQ 232
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
L+R L P R T E+ HPWM++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF TMM S
Sbjct: 121 -EVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMM 533
+ E+I E D D DG++NYEEF MM
Sbjct: 121 -EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF TMM +
Sbjct: 121 -EVDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
AE L+EE+I K FA D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
GTID+ EF+S M R E+D E L +AF+ FD+D +G I+ EL M + G + D+
Sbjct: 61 GTIDFPEFLS-LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG INYEEF MM S
Sbjct: 120 -EVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF TMM +
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVTMMTA 147
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 141/283 (49%), Gaps = 18/283 (6%)
Query: 79 QKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR 138
++P + +ED + L K LG+G FG +L T +A K++ K ++ D
Sbjct: 7 ERPSLQIKLKIED----FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 62
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
E E +++ + ++ ++++ VME +GG+L I + + A
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 122
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV--FIDEGKVYRD 256
I+ + H G+++RDLK +N LL +KDG +K DFG+ + + K +
Sbjct: 123 FYAAEIILGLQFLHSKGIVYRDLKLDNILL-DKDGH--IKIADFGMCKENMLGDAKT-NE 178
Query: 257 IVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315
G+ Y+APE+L + Y +D WS GV+LY +L G PF + E+ +F +I +D
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDN 235
Query: 316 ESEP-WLLISDSAKDLVRKMLIQDPKKRI-TSAEVLEHPWMRE 356
P WL AKDL+ K+ +++P+KR+ ++ +HP RE
Sbjct: 236 PFYPRWL--EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 421
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 299 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 422
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 423 VDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 300 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 347
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 452 TIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 421
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 299 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV 447
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D
Sbjct: 2 NAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 61
Query: 448 DGNGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IG 504
DGNGTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G +
Sbjct: 62 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 121
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
DE + E+I E D D DG++NYEEF MM +
Sbjct: 122 DE-EVDEMIREADIDGDGQVNYEEFVQMMTA 151
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 121 -EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 421
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 299 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 121 -EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 91/148 (61%), Gaps = 6/148 (4%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 452 TIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
TID+ EF++ M R+ + D E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 363 TIDFPEFLTM-MARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE- 420
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 299 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 387
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
A KE S D D DG I +E T+MRS P +
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 312
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 387
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 265 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 312
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 122 -EVDEMIREADIDGDGQVNYEEFVQMMTA 149
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 126/268 (47%), Gaps = 20/268 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR---EIQIMQHLS 152
Y +G LG G FG Y S A K + K ++ + + + R E+ +++ +S
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 153 -GQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
G ++ +E S L++E +LFD I +G E+ A + ++ V H
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
CH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R +G+ VWS G++LY ++ G PF + E I+ G V F +S +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR----VSSECQ 232
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
L+R L P R T E+ HPWM++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 121 -EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 18/283 (6%)
Query: 79 QKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR 138
++P + +ED + L K LG+G FG +L T +A K++ K ++ D
Sbjct: 6 ERPSLQIKLKIED----FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 61
Query: 139 EDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
E E +++ + ++ ++++ VME +GG+L I + + A
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 121
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV--FIDEGKVYRD 256
I+ + H G+++RDLK +N LL +KDG +K DFG+ + + K
Sbjct: 122 FYAAEIILGLQFLHSKGIVYRDLKLDNILL-DKDGH--IKIADFGMCKENMLGDAKT-NX 177
Query: 257 IVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315
G+ Y+APE+L + Y +D WS GV+LY +L G PF + E+ +F +I +D
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDN 234
Query: 316 ESEP-WLLISDSAKDLVRKMLIQDPKKRI-TSAEVLEHPWMRE 356
P WL AKDL+ K+ +++P+KR+ ++ +HP RE
Sbjct: 235 PFYPRWL--EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 384
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 385 VDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 262 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 309
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE- 125
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 126 EVDEMIREADIDGDGQVNYEEFVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K FA D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
GTID+ EF+S M R E+D E L +AF+ FD+D +G I+ EL M + G + D+
Sbjct: 61 GTIDFPEFLS-LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG INYEEF MM S
Sbjct: 120 -EVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE- 120
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 138/273 (50%), Gaps = 16/273 (5%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
RQ+ LGK G FG C +TG YACK + K+++ ++ E QI++ +
Sbjct: 186 FRQYRVLGK----GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI--IAQGHYTEKAAAALCRAIVNVVH 209
+ + +V AYE + ++ LV+ L +GG+L I + Q + E A I +
Sbjct: 242 NS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H +++RDLKPEN LL D ++ +D GL+V + EG+ + VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
+ Y D W+ G +LY +++G PF +K + + + + E S A+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 329 DLVRKMLIQDPKKRI-----TSAEVLEHPWMRE 356
L ++L +DP +R+ ++ EV EHP ++
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ ++I E D D DG++NYEEF MM +
Sbjct: 121 -EVDQMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+ + L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 450 NGTIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
+GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 420 -EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
A KE S D D DG I +E T+MRS P +
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 345
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 4/149 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+ + L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 450 NGTIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
+GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 420 -EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
A KE S D D DG I +E T+MRS P +
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 345
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 138/273 (50%), Gaps = 16/273 (5%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
RQ+ LGK G FG C +TG YACK + K+++ ++ E QI++ +
Sbjct: 186 FRQYRVLGK----GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI--IAQGHYTEKAAAALCRAIVNVVH 209
+ + +V AYE + ++ LV+ L +GG+L I + Q + E A I +
Sbjct: 242 NS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H +++RDLKPEN LL D ++ +D GL+V + EG+ + VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
+ Y D W+ G +LY +++G PF +K + + + + E S A+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 329 DLVRKMLIQDPKKRI-----TSAEVLEHPWMRE 356
L ++L +DP +R+ ++ EV EHP ++
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 452 TIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 421
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 299 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 346
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 420
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 488 YITRDELETAMKDYGIGDEASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAK 542
Y TRD+L A KE S D D DG I +E T+MRS P +
Sbjct: 298 YNTRDQLTEEQI-------AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 345
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 454 DYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
D+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE +
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EVD 119
Query: 511 EIISEVDTDNDGRINYEEFCTMMRS 535
E+I E D D DG++NYEEF MM +
Sbjct: 120 EMIREADIDGDGQVNYEEFVQMMTA 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 454 DYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
D+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EVD 120
Query: 511 EIISEVDTDNDGRINYEEFCTMMRS 535
E+I E D D DG++NYEEF MM +
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E + D DG++NYEEF MM +
Sbjct: 120 EVDEMIREANIDGDGQVNYEEFVQMMTA 147
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 454 DYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
D+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EVD 120
Query: 511 EIISEVDTDNDGRINYEEFCTMM 533
E+I E D D DG++NYEEF MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG+G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ EF+ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-E 412
Query: 509 IKEIISEVDTDNDGRINYEEFCTMM 533
+ E+I E D D DG++NYEEF MM
Sbjct: 413 VDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D D DG++NYEEF MM +
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 14/182 (7%)
Query: 364 PIGSAVLSRMKQFRAMNKLKKMALKVIAEAL-SEEEIKGLKTMFANMDTDKSGTITYEEL 422
P + + M++F+ KL + AL +A L S+EE K L +F ++D + G + +EL
Sbjct: 26 PSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL 85
Query: 423 KTGLARL-GSKLS-------ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHL 474
G ++L G +++ E+EV ++ AAD D NG IDY EF++ M R L + L
Sbjct: 86 IDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKL 145
Query: 475 YKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTM 532
AFQ FD+D +G I+ DEL + +G+ + + KE+IS +D++NDG +++EEFC M
Sbjct: 146 ESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKM 202
Query: 533 MR 534
++
Sbjct: 203 IQ 204
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 4/146 (2%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
A +EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGT
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 453 IDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASI 509
ID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE +
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EV 119
Query: 510 KEIISEVDTDNDGRINYEEFCTMMRS 535
E+I E D D DG++NYEEF MM +
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTI
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 454 DYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
D+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE +
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EVD 121
Query: 511 EIISEVDTDNDGRINYEEFCTMM 533
E+I E D D DG++NYEEF MM
Sbjct: 122 EMIREADIDGDGQVNYEEFVQMM 144
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 8/175 (4%)
Query: 366 GSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTG 425
G VL K + + K +K+A+ +IA+ ++ +++ LK+ F +D D G IT E+LK G
Sbjct: 18 GIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKG 77
Query: 426 LARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDN 485
L + G KL L+D D DG+G IDY EFI+A + R +L + + +Y AF+ FD DN
Sbjct: 78 LEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDN 135
Query: 486 SGYITRDELETAM----KDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
G IT EL + K I D +K +I +VD +NDG+I++ EF MM+
Sbjct: 136 DGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 26/302 (8%)
Query: 71 SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
S S P + + + L D + L + +G G +G Y TG A K +
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-- 58
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQ------SVHLVMELCSGGELFD 184
V + E+IK+EI +++ S +NI + GA+ + + LVME C G + D
Sbjct: 59 --VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116
Query: 185 KIIAQGHYT--EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDF 242
I T E+ A +CR I+ + H H V+HRD+K +N LL+ A +K DF
Sbjct: 117 LIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE---NAEVKLVDF 173
Query: 243 GLSVFIDEGKVYRD-IVGSAYYVAPEVLR------RSYGKEIDVWSAGVILYILLSGVPP 295
G+S +D R+ +G+ Y++APEV+ +Y + D+WS G+ + G PP
Sbjct: 174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 296 FW-AETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ +F +S+ W S + + L+++ +R + ++++HP++
Sbjct: 234 LCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
Query: 355 RE 356
R+
Sbjct: 291 RD 292
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L++E+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E L +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMM 533
+ E+I E D D DG++NYEEF +M
Sbjct: 120 EVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
LK F D D +G I+ EL+ + LG KL++ EV +++ ADVDG+G ++Y EF+
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 462 TMHR 465
M +
Sbjct: 145 MMAK 148
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L++E+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E L +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMM 533
+ E+I E D D DG++NYEEF +M
Sbjct: 120 EVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEE LK F D D +G I+ EL+ + LG KL++ EV +++ ADVDG+G ++
Sbjct: 81 SEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 137
Query: 455 YIEFISATMHR 465
Y EF+ M +
Sbjct: 138 YEEFVQVMMAK 148
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 455 YIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKE 511
+ EF++ + + + +E + +AF+ FDKD +GYI+ EL M + G + DE + E
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EVDE 119
Query: 512 IISEVDTDNDGRINYEEFCTMMRS 535
+I E D D DG++NYEEF MM +
Sbjct: 120 MIREADIDGDGQVNYEEFVQMMTA 143
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 86/143 (60%), Gaps = 3/143 (2%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 455 YIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKEI 512
+ EF++ + + E + +AF+ FDKD +GYI+ EL M + G + DE + E+
Sbjct: 61 FPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EVDEM 119
Query: 513 ISEVDTDNDGRINYEEFCTMMRS 535
I E + D DG++NYEEF MM +
Sbjct: 120 IREANIDGDGQVNYEEFVQMMTA 142
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
L ++A + + + + ++ F D D +G I+ EL+ + LG KL++ EV +++ A+
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 447 VDGNGTIDYIEFI 459
+DG+G ++Y EF+
Sbjct: 125 IDGDGQVNYEEFV 137
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 64/77 (83%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV 447
K +AE LSEEEI GLK +F +DTD SGTIT++ELK GL R+GS+L E+E+K LMDAAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 448 DGNGTIDYIEFISATMH 464
D +GTIDY EFI+AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 474 LYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFC 530
L + F+ D DNSG IT DEL+ +K G E+ IK+++ D D G I+Y EF
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI 82
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ LSEE+I K F D D G IT EEL T + L +E E++ ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTI++ EF+S + + + +E L +AF+ FDKD +GYI+ EL M + G + DE
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
++++I E D D DG++NYEEF MM +
Sbjct: 120 EVEQMIKEADLDGDGQVNYEEFVKMMMT 147
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 382 LKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQL 441
L MA KV + +EEE LK F D D++G I+ EL+ + LG KL++ EV+Q+
Sbjct: 69 LSLMAKKV-KDTDAEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQM 124
Query: 442 MDAADVDGNGTIDYIEFISATM 463
+ AD+DG+G ++Y EF+ M
Sbjct: 125 IKEADLDGDGQVNYEEFVKMMM 146
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 44/305 (14%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQI 147
+ ++ +GK +G G +G+ + C TG A K K + +D IK REI++
Sbjct: 2 MEKYEKIGK-IGEGSYGVVFKCRNRDTGQIVAIK-----KFLESEDDPVIKKIALREIRM 55
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
++ L N+V + ++ +HLV E C L + Q E ++ +
Sbjct: 56 LKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQA 114
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAP 266
V+ CH +HRD+KPEN L++ +++K DFG + + Y D V + +Y +P
Sbjct: 115 VNFCHKHNCIHRDVKPENILITKH---SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------KGIFDAILKGGVDFE 316
E+L YG +DVW+ G + LLSGVP + +++ K + D I + F
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231
Query: 317 S---------------EPWLL----ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
+ EP L IS A L++ L DP +R+T ++L HP+
Sbjct: 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291
Query: 358 GEASD 362
E D
Sbjct: 292 REIED 296
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 365 IGSAVLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKT 424
+ S +L +K F+ N+LKK+AL +IA+ L + EI L+ +F +D D SGT++ +E+
Sbjct: 22 LSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILD 81
Query: 425 GLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKD 484
GL ++G + ++ Q++ D + +G I Y +F++AT+ + + E F++FD D
Sbjct: 82 GLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDID 141
Query: 485 NSGYITRDELETAMKDYGIGD---EASIKEIISEVDTDNDGRINYEEFCTMM 533
+G I+ +EL+ I + + +I ++ EVD + DG I++ EF MM
Sbjct: 142 GNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L++E+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 454 DYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
D+ EF++ + + + +E L +AF+ FDKD +G+I+ EL M + G + DE +
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE-EVD 119
Query: 511 EIISEVDTDNDGRINYEEFCTMM 533
E+I E D D DG++NYEEF +M
Sbjct: 120 EMIREADVDGDGQVNYEEFVQVM 142
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEE LK F D D +G I+ EL+ + LG KL++ EV +++ ADVDG+G ++
Sbjct: 78 SEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 134
Query: 455 YIEFISATMHR 465
Y EF+ M +
Sbjct: 135 YEEFVQVMMAK 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L++++I K F+ D D G IT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E L +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMM 533
+ E+I E D D DG+INYEEF +M
Sbjct: 121 -EVDEMIREADVDGDGQINYEEFVKVM 146
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEE LK F D D++G I+ EL+ + LG KL++ EV +++ ADVDG+G I+
Sbjct: 82 SEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
Query: 455 YIEFISATMHR 465
Y EF+ M +
Sbjct: 139 YEEFVKVMMAK 149
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+A+ L+E++I K F+ D D G IT +EL T + LG +E E++ +++ D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 450 NGTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
NGTID+ EF++ + + + +E L +AF+ FDKD +G+I+ EL M + G + DE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMM 533
+ E+I E D D DG+INY+EF +M
Sbjct: 121 -EVDEMIREADVDGDGQINYDEFVKVM 146
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEE LK F D D++G I+ EL+ + LG KL++ EV +++ ADVDG+G I+
Sbjct: 82 SEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
Query: 455 YIEFISATMHR 465
Y EF+ M +
Sbjct: 139 YDEFVKVMMAK 149
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-----IKREIQIM 148
Q Y+ LG G FG + + K I K K++ ED + EI I+
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMEL-CSGGELFDKIIAQGHYTEKAAAALCRAIVNV 207
+ NI++ +E++ LVME SG +LF I E A+ + R +V+
Sbjct: 84 SRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
V + ++HRD+K EN +++ +K DFG + +++ GK++ G+ Y APE
Sbjct: 143 VGYLRLKDIIHRDIKDENIVIAED---FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPE 199
Query: 268 VLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISD 325
VL + G E+++WS GV LY L+ PF E E+ + AI P L+S
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HPPYLVSK 249
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362
LV +L P++R T +++ PW+ + +D
Sbjct: 250 ELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLAD 286
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 14/261 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L T YA K + K ++ D E E +++ + +
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ ++ VME +GG+L I G + E A I + G+++RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 222 KPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDV 279
K +N +L D +K DFG+ I +G + G+ Y+APE++ + YGK +D
Sbjct: 469 KLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 525
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L+G PF E E +F +I++ V + +S A + + ++ + P
Sbjct: 526 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKGLMTKHP 581
Query: 340 KKRITSA-----EVLEHPWMR 355
KR+ ++ EH + R
Sbjct: 582 GKRLGCGPEGERDIKEHAFFR 602
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSG-GELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
SG ++ +E S L++E +LFD I +G E+ A + ++ V H
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLR 270
CH GV+HRD+K EN L+ G LK DFG + + VY D G+ Y PE +R
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 229
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
R +G+ VWS G++LY ++ G PF + E I++G V F +S +
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR----VSSECQ 279
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
L+R L P R T E+ HPWM++
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 14/261 (5%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G FG L T YA K + K ++ D E E +++ + +
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
++ ++ VME +GG+L I G + E A I + G+++RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 222 KPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL-RRSYGKEIDV 279
K +N +L D +K DFG+ I +G + G+ Y+APE++ + YGK +D
Sbjct: 148 KLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDP 339
W+ GV+LY +L+G PF E E +F +I++ V + +S A + + ++ + P
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKGLMTKHP 260
Query: 340 KKRITSA-----EVLEHPWMR 355
KR+ ++ EH + R
Sbjct: 261 GKRLGCGPEGERDIKEHAFFR 281
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 50/295 (16%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQHLSG 153
+++G G +G+ Y +N+ G ++A K I + ++ED REI I++ L
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELK- 58
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
NIV+ ++ + LV E +L D + +G A + ++N + +C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL- 269
H V+HRDLKP+N L+ N++G LK DFGL+ F + Y V + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLI-NREGE--LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------------ 310
+ Y ID+WS G I +++G P F +E I +
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 311 ---GGVDFESEPW--LL--ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
+E PW L + +S DL+ KML DP +RIT+ + LEH + +E
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 24/282 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED---IKREIQIMQHLS 152
Y LG LG+G FG + + A K I + +++ D E+ ++ +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 153 ---GQQNIVEFRGAYEDRQSVHLVME-LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
G ++ +E ++ LV+E +LFD I +G E + +V +
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
HCH GV+HRD+K EN L+ + G A K DFG + + + Y D G+ Y PE
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHD-EPYTDFDGTRVYSPPEW 209
Query: 269 LRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
+ R + VWS G++LY ++ G PF + E IL+ + F + +S
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPAH----VSPD 259
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSA 368
L+R+ L P R + E+L PWM+ A D P+ +
Sbjct: 260 CCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPLNPS 299
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 50/295 (16%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQHLSG 153
+++G G +G+ Y +N+ G ++A K I + ++ED REI I++ L
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELK- 58
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
NIV+ ++ + LV E +L D + +G A + ++N + +C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL- 269
H V+HRDLKP+N L+ N++G LK DFGL+ F + Y V + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLI-NREGE--LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------------ 310
+ Y ID+WS G I +++G P F +E I +
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 311 ---GGVDFESEPW--LL--ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
+E PW L + +S DL+ KML DP +RIT+ + LEH + +E
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 140/281 (49%), Gaps = 20/281 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE-DIKREIQIMQHLSGQ 154
Y +G LG G +G ++ T A K + K+KL + E ++K+EIQ+++ L
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65
Query: 155 QNIVEFRGAY--EDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+N+++ E++Q +++VME C G E+ D + + +A C+ +++ + +
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ-LIDGLEY 124
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPE 267
H G++H+D+KP N LL+ G LK + G++ + R GS + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 268 V---LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLIS 324
+ L G ++D+WSAGV LY + +G+ PF + +F+ I KG +
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGD----CG 237
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
DL++ ML +P KR + ++ +H W R+ ++ P+
Sbjct: 238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 27/281 (9%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
ED YT+G G +G S G K L + + +++ + E+ +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKE-LDYGSMTEAEKQMLVSEVNLLR 60
Query: 150 HLSGQQNIVEFRGAYEDRQ--SVHLVMELCSGGELFDKIIAQG-----HYTEKAAAALCR 202
L NIV + DR ++++VME C GG+L +I +G + E+ +
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL-ASVITKGTKERQYLDEEFVLRVMT 118
Query: 203 AIVNVVHHCHFMG-----VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-RD 256
+ + CH V+HRDLKP N L DG +K DFGL+ ++ + + ++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDEDFAKE 175
Query: 257 IVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315
VG+ YY++PE + R SY ++ D+WS G +LY L + +PPF A ++K + I +G F
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KF 233
Query: 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
P+ SD +++ +ML R + E+LE+P + E
Sbjct: 234 RRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 50/295 (16%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQHLSG 153
+++G G +G+ Y +N+ G ++A K I + ++ED REI I++ L
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELK- 58
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
NIV+ ++ + LV E +L D + +G A + ++N + +C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL- 269
H V+HRDLKP+N L+ N++G LK DFGL+ F + Y + + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLI-NREGE--LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 270 -RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK------------------ 310
+ Y ID+WS G I +++G P F +E I +
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 311 ---GGVDFESEPW--LL--ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGG 358
+E PW L + +S DL+ KML DP +RIT+ + LEH + +E
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 140/339 (41%), Gaps = 77/339 (22%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L K+LG+G +GI + + TG A K I N D + REI I+ LSG +
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREIMILTELSGHE 69
Query: 156 NIVEFRGAY--EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV ++ + V+LV + +I + ++ V+ + H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS----------------------VFIDEG 251
G++HRD+KP N LL + +K DFGLS F D+
Sbjct: 128 GGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 252 KVYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL 309
+ D V + +Y APE+L S Y K ID+WS G IL +L G P F + + I+
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244
Query: 310 KGGVDFESE----------------------------------PW--LLI--------SD 325
G +DF S W LL+ ++
Sbjct: 245 -GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
A DL+ K+L +P KRI++ + L+HP++ +++P
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 27/281 (9%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
ED YT+G G +G S G K L + + +++ + E+ +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKE-LDYGSMTEAEKQMLVSEVNLLR 60
Query: 150 HLSGQQNIVEFRGAYEDRQ--SVHLVMELCSGGELFDKIIAQG-----HYTEKAAAALCR 202
L NIV + DR ++++VME C GG+L +I +G + E+ +
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL-ASVITKGTKERQYLDEEFVLRVMT 118
Query: 203 AIVNVVHHCHFMG-----VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-RD 256
+ + CH V+HRDLKP N L DG +K DFGL+ ++ + +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKT 175
Query: 257 IVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315
VG+ YY++PE + R SY ++ D+WS G +LY L + +PPF A ++K + I +G F
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KF 233
Query: 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
P+ SD +++ +ML R + E+LE+P + E
Sbjct: 234 RRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 72 ATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRK 131
A +TR K + LG L+D + L + +GRG + L T YA K ++K++
Sbjct: 4 AMNTRESGKASSSLG--LQD----FDLLRVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKE 56
Query: 132 LVNKQDREDI---KREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA 188
LVN D EDI + E + + S +V ++ + V+E +GG+L +
Sbjct: 57 LVN--DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 114
Query: 189 QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-F 247
Q E+ A I +++ H G+++RDLK +N LL D +K TD+G+
Sbjct: 115 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEG 171
Query: 248 IDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF---------W 297
+ G G+ Y+APE+LR YG +D W+ GV+++ +++G PF
Sbjct: 172 LRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 231
Query: 298 AETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS------AEVLEH 351
TE +F IL+ + +S A +++ L +DPK+R+ A++ H
Sbjct: 232 QNTEDYLFQVILEKQIRIPRS----MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGH 287
Query: 352 PWMR 355
P+ R
Sbjct: 288 PFFR 291
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 141/334 (42%), Gaps = 58/334 (17%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIM 148
+I + L LG G +G+ T TG A K I + L + REI+I+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKIL 63
Query: 149 QHLSGQQNIVEFR----GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
+H + I F ++E+ V+++ EL ++I+ ++
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQT 121
Query: 205 VNVVHHCHFMGVMHRDLKPENFLL-SNKDGGAMLKATDFGLSVFIDEGKV---------- 253
+ V H V+HRDLKP N L+ SN D LK DFGL+ IDE
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCD----LKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 254 -YRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFD 306
+ V + +Y APEV+ S Y + +DVWS G IL L P F + IF
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 307 AI--------------------LKGGVDFESEP----WLLISDSAKDLVRKMLIQDPKKR 342
I +K + + P + ++ DL+++ML+ DP KR
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQF 376
IT+ E LEHP+++ + +D+P G + +F
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 141/334 (42%), Gaps = 58/334 (17%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIM 148
+I + L LG G +G+ T TG A K I + L + REI+I+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKIL 63
Query: 149 QHLSGQQNIVEFR----GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
+H + I F ++E+ V+++ EL ++I+ ++
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQT 121
Query: 205 VNVVHHCHFMGVMHRDLKPENFLL-SNKDGGAMLKATDFGLSVFIDEGKV---------- 253
+ V H V+HRDLKP N L+ SN D LK DFGL+ IDE
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCD----LKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 254 -YRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFD 306
+ V + +Y APEV+ S Y + +DVWS G IL L P F + IF
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 307 AI--------------------LKGGVDFESEP----WLLISDSAKDLVRKMLIQDPKKR 342
I +K + + P + ++ DL+++ML+ DP KR
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQF 376
IT+ E LEHP+++ + +D+P G + +F
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 16/269 (5%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + + +G+G FG + +N T YA K + K+K V + + ++ +E+QIMQ L
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HP 75
Query: 156 NIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+V +++D + + +V++L GG+L + H+ E+ +V + +
Sbjct: 76 FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR 135
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR---- 271
++HRD+KP+N LL D + TDF ++ + + G+ Y+APE+
Sbjct: 136 IIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGA 192
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFW---AETEKGIFDAILKGGVDFESEPWLLISDSAK 328
Y +D WS GV Y LL G P+ + + K I V + S W S
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS-AW---SQEMV 248
Query: 329 DLVRKMLIQDPKKRITS-AEVLEHPWMRE 356
L++K+L +P +R + ++V P+M +
Sbjct: 249 SLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 139/329 (42%), Gaps = 58/329 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSG 153
+ L LG G +G+ T TG A K I + L + REI+I++H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 154 QQNIVEFR----GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ I F ++E+ V+++ EL ++I+ ++ + V
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 210 HCHFMGVMHRDLKPENFLL-SNKDGGAMLKATDFGLSVFIDEGKV-----------YRDI 257
H V+HRDLKP N L+ SN D LK DFGL+ IDE +
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCD----LKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 258 VGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI--- 308
V + +Y APEV+ S Y + +DVWS G IL L P F + IF I
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 309 -----------------LKGGVDFESEP----WLLISDSAKDLVRKMLIQDPKKRITSAE 347
+K + + P + ++ DL+++ML+ DP KRIT+ E
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKE 302
Query: 348 VLEHPWMREGGEASDKPIGSAVLSRMKQF 376
LEHP+++ + +D+P G + +F
Sbjct: 303 ALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 27/281 (9%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
ED YT+G G +G S G K L + + +++ + E+ +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKE-LDYGSMTEAEKQMLVSEVNLLR 60
Query: 150 HLSGQQNIVEFRGAYEDRQ--SVHLVMELCSGGELFDKIIAQG-----HYTEKAAAALCR 202
L NIV + DR ++++VME C GG+L +I +G + E+ +
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL-ASVITKGTKERQYLDEEFVLRVMT 118
Query: 203 AIVNVVHHCHFMG-----VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-RD 256
+ + CH V+HRDLKP N L DG +K DFGL+ ++ + +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKA 175
Query: 257 IVGSAYYVAPEVLRR-SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDF 315
VG+ YY++PE + R SY ++ D+WS G +LY L + +PPF A ++K + I +G F
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KF 233
Query: 316 ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
P+ SD +++ +ML R + E+LE+P + E
Sbjct: 234 RRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 72 ATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRK 131
A +TR K + LG L+D + L + +GRG + L T YA + ++K++
Sbjct: 36 AMNTRESGKASSSLG--LQD----FDLLRVIGRGSYAKVLLVRLKKTDRIYAMR-VVKKE 88
Query: 132 LVNKQDREDI---KREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA 188
LVN D EDI + E + + S +V ++ + V+E +GG+L +
Sbjct: 89 LVN--DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 146
Query: 189 QGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-F 247
Q E+ A I +++ H G+++RDLK +N LL D +K TD+G+
Sbjct: 147 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEG 203
Query: 248 IDEGKVYRDIVGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPF---------W 297
+ G G+ Y+APE+LR YG +D W+ GV+++ +++G PF
Sbjct: 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
Query: 298 AETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS------AEVLEH 351
TE +F IL+ + +S A +++ L +DPK+R+ A++ H
Sbjct: 264 QNTEDYLFQVILEKQIRIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319
Query: 352 PWMR 355
P+ R
Sbjct: 320 PFFR 323
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 98.6 bits (244), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 4/142 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T LG +E E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL + G + DE
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEF 529
+ E I E D D DG++NYEEF
Sbjct: 120 EVDEXIREADIDGDGQVNYEEF 141
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEEI+ F D D +G I+ EL+ LG KL++ EV + + AD+DG+G ++
Sbjct: 81 SEEEIR---EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 455 YIEFI 459
Y EF+
Sbjct: 138 YEEFV 142
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 369 VLSRMKQFRAMNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR 428
VL K + M + +K+A+ +IA+ ++ +++ LK F ++D + G IT +L+ GL R
Sbjct: 24 VLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLER 83
Query: 429 LGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGY 488
G L L+D D DG+G IDY EF++A + R +L + + +Y AF+ FD DN G
Sbjct: 84 SGLMLPPN-FDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVDNDGE 141
Query: 489 ITRDELETAM----KDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTMMR 534
IT EL + K I D +K++I EVD + DG+I++ EF MM+
Sbjct: 142 ITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 4/148 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE++ K F+ D D G IT EL T + LG +E E++ +M D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GT+D+ EF+ + + + +E + +AF+ FDKD +G+++ EL M G + DE
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I DTD DG++NYEEF ++ S
Sbjct: 120 EVDEMIRAADTDGDGQVNYEEFVRVLVS 147
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 14/272 (5%)
Query: 80 KPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE 139
KP T L K ++ R+ + + K +GRG FG + +T YA K + K +++ + +
Sbjct: 76 KPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 135
Query: 140 DIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAA 198
+ E ++ + Q I A++D ++LVM+ GG+L + + E A
Sbjct: 136 CFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 194
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDI 257
+V + H + +HRD+KP+N LL D ++ DFG + + D+G V +
Sbjct: 195 FYIGEMVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 258 -VGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK 310
VG+ Y++PE+L+ YG E D WS GV +Y +L G PF+AE+ + I+
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
Query: 311 GGVDFESEPWLL-ISDSAKDLVRKMLIQDPKK 341
F+ + +S+ AKDL+++++ ++
Sbjct: 312 HEERFQFPSHVTDVSEEAKDLIQRLICSRERR 343
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 14/272 (5%)
Query: 80 KPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE 139
KP T L K ++ R+ + + K +GRG FG + +T YA K + K +++ + +
Sbjct: 60 KPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 119
Query: 140 DIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAA 198
+ E ++ + Q I A++D ++LVM+ GG+L + + E A
Sbjct: 120 CFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR 178
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDI 257
+V + H + +HRD+KP+N LL D ++ DFG + + D+G V +
Sbjct: 179 FYIGEMVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 258 -VGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK 310
VG+ Y++PE+L+ YG E D WS GV +Y +L G PF+AE+ + I+
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 311 GGVDFESEPWLL-ISDSAKDLVRKMLIQDPKK 341
F+ + +S+ AKDL+++++ ++
Sbjct: 296 HEERFQFPSHVTDVSEEAKDLIQRLICSRERR 327
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 97.8 bits (242), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/142 (39%), Positives = 84/142 (59%), Gaps = 4/142 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T LG +E E++ ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTID+ EF++ + + + +E + +AF+ FDKD +GYI+ EL + G + DE
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE- 120
Query: 508 SIKEIISEVDTDNDGRINYEEF 529
+ + I E D D DG++NYEEF
Sbjct: 121 EVDQXIREADIDGDGQVNYEEF 142
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEEI+ F D D +G I+ EL+ LG KL++ EV Q + AD+DG+G ++
Sbjct: 82 SEEEIR---EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVN 138
Query: 455 YIEFI 459
Y EF+
Sbjct: 139 YEEFV 143
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 49/297 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y L ++LGRG++ + N T N ILK NK IKREI+I+++L G
Sbjct: 39 YQLVRKLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKNK-----IKREIKILENLRGGP 92
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NI+ +D ++ LV E + + K + Q T+ I+ + +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYCHS 149
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RR 271
MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+ PE+L +
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDAILKGGVDFE- 316
Y +D+WS G +L ++ PF+ + + ++D I K ++ +
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 317 -------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
SE L+S A D + K+L D + R+T+ E +EHP+
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI---KREIQIMQH 150
Q + L + +GRG + L T YA K ++K++LVN D EDI + E + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVN--DDEDIDWVQTEKHVFEQ 61
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
S +V ++ + V+E +GG+L + Q E+ A I +++
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL 269
H G+++RDLK +N LL D +K TD+G+ + G G+ Y+APE+L
Sbjct: 122 LHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 270 R-RSYGKEIDVWSAGVILYILLSGVPPF---------WAETEKGIFDAILKGGVDFESEP 319
R YG +D W+ GV+++ +++G PF TE +F IL+ +
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS- 237
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITS------AEVLEHPWMR 355
+S A +++ L +DPK+R+ A++ HP+ R
Sbjct: 238 ---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI---KREIQIMQH 150
Q + L + +GRG + L T YA K ++K++LVN D EDI + E + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVN--DDEDIDWVQTEKHVFEQ 65
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
S +V ++ + V+E +GG+L + Q E+ A I +++
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVL 269
H G+++RDLK +N LL D +K TD+G+ + G G+ Y+APE+L
Sbjct: 126 LHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 270 R-RSYGKEIDVWSAGVILYILLSGVPPF---------WAETEKGIFDAILKGGVDFESEP 319
R YG +D W+ GV+++ +++G PF TE +F IL+ +
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS- 241
Query: 320 WLLISDSAKDLVRKMLIQDPKKRITS------AEVLEHPWMR 355
+S A +++ L +DPK+R+ A++ HP+ R
Sbjct: 242 ---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 96.3 bits (238), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/142 (39%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T LG +E E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
GTI++ EF++ + + +E + +AF+ FDKD +GYI+ EL + G + DE
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE- 119
Query: 508 SIKEIISEVDTDNDGRINYEEF 529
+ E I E D D DG++NYEEF
Sbjct: 120 EVDEXIREADIDGDGQVNYEEF 141
Score = 48.5 bits (114), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E+ +AF FDKD G IT EL T + G EA +++ I+EVD D +G IN+
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFP 66
Query: 528 EFCT 531
EF T
Sbjct: 67 EFLT 70
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
SEEEI+ F D D +G I+ EL+ LG KL++ EV + + AD+DG+G ++
Sbjct: 81 SEEEIR---EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 455 YIEFI 459
Y EF+
Sbjct: 138 YEEFV 142
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 25/282 (8%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
F+ + ELG G FG Y T A K I + ++++ ED EI I+
Sbjct: 38 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDH 93
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCH 212
NIV+ A+ ++ +++E C+GG + D ++ + TE +C+ ++ +++ H
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR- 270
++HRDLK N L + DG +K DFG+S RD +G+ Y++APEV+
Sbjct: 153 DNKIIHRDLKAGNILFT-LDGD--IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 271 -----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP--WLLI 323
R Y + DVWS G+ L + PP + I K ++P W
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW--- 266
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
S + KD ++K L ++ R T++++L+HP++ S+KPI
Sbjct: 267 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 25/282 (8%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
F+ + ELG G FG Y T A K I + ++++ ED EI I+
Sbjct: 38 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDH 93
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCH 212
NIV+ A+ ++ +++E C+GG + D ++ + TE +C+ ++ +++ H
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR- 270
++HRDLK N L + DG +K DFG+S RD +G+ Y++APEV+
Sbjct: 153 DNKIIHRDLKAGNILFT-LDGD--IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 271 -----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP--WLLI 323
R Y + DVWS G+ L + PP + I K ++P W
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW--- 266
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
S + KD ++K L ++ R T++++L+HP++ S+KPI
Sbjct: 267 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 25/282 (8%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
F+ + ELG G FG Y T A K I + ++++ ED EI I+
Sbjct: 38 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDH 93
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCH 212
NIV+ A+ ++ +++E C+GG + D ++ + TE +C+ ++ +++ H
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVLR- 270
++HRDLK N L + DG +K DFG+S RD +G+ Y++APEV+
Sbjct: 153 DNKIIHRDLKAGNILFT-LDGD--IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 271 -----RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP--WLLI 323
R Y + DVWS G+ L + PP + I K ++P W
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW--- 266
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
S + KD ++K L ++ R T++++L+HP++ S+KPI
Sbjct: 267 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 133/266 (50%), Gaps = 14/266 (5%)
Query: 80 KPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRE 139
KP T K + R+ + + K +GRG FG + + +A K + K +++ + +
Sbjct: 60 KPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETA 119
Query: 140 DIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAA 198
+ E ++ + + I A++D +++LVM+ GG+L + + E+ A
Sbjct: 120 CFREERDVLVN-GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR 178
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDI 257
+V + H + +HRD+KP+N L+ D ++ DFG + +++G V +
Sbjct: 179 FYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSV 235
Query: 258 -VGSAYYVAPEVLRR------SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK 310
VG+ Y++PE+L+ YG E D WS GV +Y +L G PF+AE+ + I+
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 311 GGVDFESEPWLL-ISDSAKDLVRKML 335
F+ + +S++AKDL+R+++
Sbjct: 296 HKERFQFPTQVTDVSENAKDLIRRLI 321
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 7/216 (3%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
I + Y + +LG G YL + A K+I ++ + +RE+ L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHC 211
S QNIV E+ +LVME G L + I + G + A I++ + H
Sbjct: 69 S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEVL 269
H M ++HRD+KP+N L+ D LK DFG++ + E + + ++G+ Y +PE
Sbjct: 128 HDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 270 RRSYGKE-IDVWSAGVILYILLSGVPPFWAETEKGI 304
+ E D++S G++LY +L G PPF ET I
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 31 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 87
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V+LV L G +L+ K++ H +
Sbjct: 88 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSND 144
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 201
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 262 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 321
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 322 IEVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 13 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 69
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 70 TLREIKILLAFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 126
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHT 183
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L G++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 244 GILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 303
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 304 IEVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G G +G+ C TG A K L+ +K ++ REI++++ L +N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLR-HENLVNLL 90
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDL 221
+ ++ +LV E L D + + I+N + CH ++HRD+
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 222 KPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEID 278
KPEN L+S ++K DFG + G+VY D V + +Y APE+L YGK +D
Sbjct: 151 KPENILVSQ---SGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVD 207
Query: 279 VWSAGVILYILLSGVPPFWAETEKGIFDAILK-------------------GGVDF---- 315
VW+ G ++ + G P F +++ I+ GV
Sbjct: 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK 267
Query: 316 ESEP----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEA 360
E EP + +S+ DL +K L DP KR AE+L H + + G A
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D G IT ++L T + LG +E E++ +++ DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 452 TIDYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
TID+ +F++ + + + +E + +AF+ F KD +GYI+ +L M + G + DE
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDE-E 421
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMRS 535
+ E+I E D DG++NYE+F MM +
Sbjct: 422 VDEMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 17/182 (9%)
Query: 367 SAVLSRMKQFRAMNKLKKMALKVIAEALSE-EEIKGLKTMFANMDTDKSGTITYEELKTG 425
+ L MK+F++ KL + A+ + L+ EE K L +F +D + G + +EL G
Sbjct: 6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 426 LARL----GSKLS-------ETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHL 474
+L G +S E EV ++ + D D NG I+Y EF++ M + L E L
Sbjct: 66 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 475 YKAFQYFDKDNSGYITRDELETAMKDYGIG--DEASIKEIISEVDTDNDGRINYEEFCTM 532
AFQ FD D SG IT +EL +G+ D+ + +++ E D +NDG +++EEF M
Sbjct: 126 LAAFQQFDSDGSGKITNEELGRL---FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 533 MR 534
M+
Sbjct: 183 MQ 184
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 28/278 (10%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + + + ELG G FG Y TG A K I + ++++ ED EI+I+
Sbjct: 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA- 71
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVV 208
IV+ GAY + +++E C GG + D I+ + TE +CR ++ +
Sbjct: 72 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPE 267
+ H ++HRDLK N L++ + ++ DFG+S + RD +G+ Y++APE
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 268 VLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
V+ Y + D+WS G+ L + PP E +LK +S+P
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIA---KSDPPT 241
Query: 322 LISDSA-----KDLVRKMLIQDPKKRITSAEVLEHPWM 354
L++ S +D ++ L ++P+ R ++A++LEHP++
Sbjct: 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LGRG FG + C +TG YACK + K++L ++ + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLA 251
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
A+E + + LVM + +GG++ I + E A IV+ + H H ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV-YRDIVGSAYYVAPEVLR-RSYGK 275
+RDLKPEN LL + DG ++ +D GL+V + G+ + G+ ++APE+L Y
Sbjct: 312 YRDLKPENVLLDD-DGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 276 EIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDSAKDLV 331
+D ++ GV LY +++ PF A E K + +L+ V + + S ++KD
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKDFC 424
Query: 332 RKMLIQDPKKRI-----TSAEVLEHPWMRE 356
+L +DP+KR+ + + HP R+
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R Y L + +G G + A K I K D ++ +EIQ M
Sbjct: 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--ELLKEIQAMSQCH 71
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFD---KIIAQGHYT-----EKAAAALCRAI 204
NIV + ++ + + LVM+L SGG + D I+A+G + E A + R +
Sbjct: 72 -HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG------KVYRDIV 258
+ + + H G +HRD+K N LL +DG + DFG+S F+ G KV + V
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILL-GEDGSVQI--ADFGVSAFLATGGDITRNKVRKTFV 187
Query: 259 GSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG----- 311
G+ ++APEV+ R Y + D+WS G+ L +G P+ + L+
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 312 --GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
GV + E S + ++ L +DP+KR T+AE+L H + ++
Sbjct: 248 ETGVQ-DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 28/278 (10%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + + + ELG G FG Y TG A K I + ++++ ED EI+I+
Sbjct: 8 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA- 63
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVV 208
IV+ GAY + +++E C GG + D I+ + TE +CR ++ +
Sbjct: 64 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEAL 122
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPE 267
+ H ++HRDLK N L++ + ++ DFG+S + RD +G+ Y++APE
Sbjct: 123 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 268 VLR------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
V+ Y + D+WS G+ L + PP E +LK +S+P
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIA---KSDPPT 233
Query: 322 LISDSA-----KDLVRKMLIQDPKKRITSAEVLEHPWM 354
L++ S +D ++ L ++P+ R ++A++LEHP++
Sbjct: 234 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 15 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQR 71
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 128
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 185
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LGRG FG + C +TG YACK + K++L ++ + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLA 251
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
A+E + + LVM + +GG++ I + E A IV+ + H H ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV-YRDIVGSAYYVAPEVLR-RSYGK 275
+RDLKPEN LL + DG ++ +D GL+V + G+ + G+ ++APE+L Y
Sbjct: 312 YRDLKPENVLLDD-DGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 276 EIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDSAKDLV 331
+D ++ GV LY +++ PF A E K + +L+ V + + S ++KD
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKDFC 424
Query: 332 RKMLIQDPKKRI-----TSAEVLEHPWMRE 356
+L +DP+KR+ + + HP R+
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LGRG FG + C +TG YACK + K++L ++ + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLA 251
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
A+E + + LVM + +GG++ I + E A IV+ + H H ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV-YRDIVGSAYYVAPEVLR-RSYGK 275
+RDLKPEN LL + DG ++ +D GL+V + G+ + G+ ++APE+L Y
Sbjct: 312 YRDLKPENVLLDD-DGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 276 EIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDSAKDLV 331
+D ++ GV LY +++ PF A E K + +L+ V + + S ++KD
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKDFC 424
Query: 332 RKMLIQDPKKRI-----TSAEVLEHPWMRE 356
+L +DP+KR+ + + HP R+
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 128/263 (48%), Gaps = 18/263 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G +GI Y + S A K I +R + + + + EI + +HL +NIV++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLK-HKNIVQYL 85
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAIVNVVHHCHFMGVMH 218
G++ + + + ME GG L + ++ E+ + I+ + + H ++H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDE-GKVYRDIVGSAYYVAPEVLR---RSYG 274
RD+K +N L++ G +LK +DFG S + G+ Y+APE++ R YG
Sbjct: 146 RDIKGDNVLINTYSG--VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSAKDLVR 332
K D+WS G + + +G PPF+ E A+ K G+ F+ P + +S AK +
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGEPQA--AMFKVGM-FKVHPEIPESMSAEAKAFIL 260
Query: 333 KMLIQDPKKRITSAEVLEHPWMR 355
K DP KR + ++L +++
Sbjct: 261 KCFEPDPDKRACANDLLVDEFLK 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R Y L + +G G + A K I K D ++ +EIQ M
Sbjct: 9 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--ELLKEIQAMSQCH 66
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFD---KIIAQGHYT-----EKAAAALCRAI 204
NIV + ++ + + LVM+L SGG + D I+A+G + E A + R +
Sbjct: 67 -HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG------KVYRDIV 258
+ + + H G +HRD+K N LL +DG + DFG+S F+ G KV + V
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILL-GEDGSVQI--ADFGVSAFLATGGDITRNKVRKTFV 182
Query: 259 GSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG----- 311
G+ ++APEV+ R Y + D+WS G+ L +G P+ + L+
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 312 --GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREG 357
GV + E S + ++ L +DP+KR T+AE+L H + ++
Sbjct: 243 ETGVQ-DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+ + ++ F DTD SGTI +ELK + LG + + E+K+++ D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 454 DYIEFISATMHRYRL-ERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASI 509
D+ EF+ TM ++ ERD E + KAF+ FD DNSG IT +L K+ G E +
Sbjct: 82 DFEEFL--TMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEEL 139
Query: 510 KEIISEVDTDNDGRINYEEFCTMMR 534
+E+I+E D ++D I+ +EF +M+
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIMK 164
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 23/270 (8%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LGRG FG + C +TG YACK + K++L ++ + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLA 251
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIA----QGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
A+E + + LVM + +GG++ I + E A IV+ + H H ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKV-YRDIVGSAYYVAPEVLR-RSYGK 275
+RDLKPEN LL + DG ++ +D GL+V + G+ + G+ ++APE+L Y
Sbjct: 312 YRDLKPENVLLDD-DGN--VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 276 EIDVWSAGVILYILLSGVPPFWAETE----KGIFDAILKGGVDFESEPWLLISDSAKDLV 331
+D ++ GV LY +++ PF A E K + +L+ V + + S ++KD
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKDFC 424
Query: 332 RKMLIQDPKKRI-----TSAEVLEHPWMRE 356
+L +DP+KR+ + + HP R+
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 11 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 67
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 124
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 181
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 242 GILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 53/304 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y K +G G GI + G + A K L R N+ + RE+ +++ ++ +
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKK-LSRPFQNQTHAKRAYRELVLLKCVN-HK 81
Query: 156 NIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
NI+ + E+ Q V+LVMEL ++I E+ + L + + +
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGI-K 138
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV- 268
H H G++HRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 139 HLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 269 LRRSYGKEIDVWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILK---- 310
L Y + +D+WS G I+ L+ G F W + T F A L+
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 255
Query: 311 ---------GGVDFES--EPWLLISDS---------AKDLVRKMLIQDPKKRITSAEVLE 350
G+ FE W+ S+S A+DL+ KML+ DP KRI+ E L
Sbjct: 256 NYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 315
Query: 351 HPWM 354
HP++
Sbjct: 316 HPYI 319
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 11 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 67
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 124
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHT 181
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 242 GILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 132/304 (43%), Gaps = 53/304 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y K +G G GI + G + A K L R N+ + RE+ +++ ++ +
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKK-LSRPFQNQTHAKRAYRELVLLKCVN-HK 83
Query: 156 NIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
NI+ + E+ Q V+LVMEL ++I E+ + L + + +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGI-K 140
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV- 268
H H G++HRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 269 LRRSYGKEIDVWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILK---- 310
L Y +D+WS G I+ L+ G F W + T F A L+
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 257
Query: 311 ---------GGVDFES--EPWLLISDS---------AKDLVRKMLIQDPKKRITSAEVLE 350
G+ FE W+ S+S A+DL+ KML+ DP KRI+ E L
Sbjct: 258 NYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 317
Query: 351 HPWM 354
HP++
Sbjct: 318 HPYI 321
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 11 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 67
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 124
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 181
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 242 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 13 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 69
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 70 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 126
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 183
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 244 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 303
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 304 IEVEQALAHPYLEQYYDPSDEPIAEA 329
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 18/263 (6%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
LG+G +GI Y + S A K I +R + + + + EI + +HL +NIV++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLK-HKNIVQYL 71
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQG---HYTEKAAAALCRAIVNVVHHCHFMGVMH 218
G++ + + + ME GG L + ++ E+ + I+ + + H ++H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSV-FIDEGKVYRDIVGSAYYVAPEVLR---RSYG 274
RD+K +N L++ G +LK +DFG S G+ Y+APE++ R YG
Sbjct: 132 RDIKGDNVLINTYSG--VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDSAKDLVR 332
K D+WS G + + +G PPF+ E A+ K G+ F+ P + +S AK +
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQA--AMFKVGM-FKVHPEIPESMSAEAKAFIL 246
Query: 333 KMLIQDPKKRITSAEVLEHPWMR 355
K DP KR + ++L +++
Sbjct: 247 KCFEPDPDKRACANDLLVDEFLK 269
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 15 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 71
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 128
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 185
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 19 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 75
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 76 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 132
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 133 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 189
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 190 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 250 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 309
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 310 IEVEQALAHPYLEQYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 11 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 67
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 124
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 181
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 242 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 109
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYS-RAKQTLPVIYVKLYMYQ 166
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 224
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 273
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 274 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 329
Query: 381 KLKKM 385
+L +
Sbjct: 330 RLTPL 334
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 107
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYS-RAKQTLPVIYVKLYMYQ 164
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 222
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 271
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 272 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 327
Query: 381 KLKKM 385
+L +
Sbjct: 328 RLTPL 332
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 11 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 67
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 124
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 181
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 242 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 107
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYS-RAKQTLPVIYVKLYMYQ 164
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 222
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 271
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 272 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 327
Query: 381 KLKKM 385
+L +
Sbjct: 328 RLTPL 332
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 101
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 158
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 216
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 265
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 266 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 321
Query: 381 KLKKM 385
+L +
Sbjct: 322 RLTPL 326
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 9 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 65
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 66 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 122
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 179
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 240 GILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 299
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 300 IEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 111
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYS-RAKQTLPVIYVKLYMYQ 168
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYY 226
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 275
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 276 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 331
Query: 381 KLKKM 385
+L +
Sbjct: 332 RLTPL 336
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 31 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 87
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 88 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 144
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 201
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 262 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 321
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 322 IEVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 15 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 71
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 128
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 185
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 186 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 16 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 72
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 73 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 129
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 186
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 187 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 247 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 306
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 307 IEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 85
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 142
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 249
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 250 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 305
Query: 381 KLKKM 385
+L +
Sbjct: 306 RLTPL 310
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 9 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 65
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 66 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 122
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 179
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 240 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 299
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 300 IEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 152
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYS-RAKQTLPVIYVKLYMYQ 209
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYY 267
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 316
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 317 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 372
Query: 381 KLKKM 385
+L +
Sbjct: 373 RLTPL 377
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 92
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 149
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 207
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 256
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 257 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 312
Query: 381 KLKKM 385
+L +
Sbjct: 313 RLTPL 317
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 13 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQR 69
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 70 TLREIKILLAFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 126
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 183
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 244 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 303
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 304 IEVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 81
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 138
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 196
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 245
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 246 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 301
Query: 381 KLKKM 385
+L +
Sbjct: 302 RLTPL 306
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + + LG G FG TG A K R+ ++ ++RE EIQIM+ L+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 72
Query: 156 NIVEFRGAYEDRQSVH------LVMELCSGGEL---FDKIIAQGHYTEKAAAALCRAIVN 206
N+V R + Q + L ME C GG+L ++ E L I +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
+ + H ++HRDLKPEN +L + K D G + +D+G++ + VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 267 EVL-RRSYGKEIDVWSAGVILYILLSGVPPF 296
E+L ++ Y +D WS G + + ++G PF
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 16 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 72
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 73 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 129
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 186
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 187 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 247 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 306
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 307 IEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+ + + LG G FG TG A K R+ ++ ++RE EIQIM+ L+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 73
Query: 156 NIVEFRGAYEDRQSVH------LVMELCSGGEL---FDKIIAQGHYTEKAAAALCRAIVN 206
N+V R + Q + L ME C GG+L ++ E L I +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
+ + H ++HRDLKPEN +L + K D G + +D+G++ + VG+ Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 267 EVL-RRSYGKEIDVWSAGVILYILLSGVPPF 296
E+L ++ Y +D WS G + + ++G PF
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 17 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 73
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 74 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 130
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 131 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 187
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 188 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 248 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 307
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 308 IEVEQALAHPYLEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 8 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 64
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 65 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 121
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 122 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 178
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 179 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 239 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 298
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 299 IEVEQALAHPYLEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 15 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 71
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 128
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 185
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 78
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 135
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 193
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 242
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 243 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 298
Query: 381 KLKKM 385
+L +
Sbjct: 299 RLTPL 303
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 47/323 (14%)
Query: 82 ETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDI 141
E V G+P D+ YT + +G G +G+ ++ A K I ++ +
Sbjct: 32 EMVKGQPF-DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRT 88
Query: 142 KREIQIMQHLSGQQNIVEFR-----GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
REIQI+ +N++ R E + V++V +L +L+ K++ +
Sbjct: 89 LREIQILLRFR-HENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDH 145
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID----EGK 252
I+ + + H V+HRDLKP N L++ LK DFGL+ D
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT---CDLKICDFGLARIADPEHDHTG 202
Query: 253 VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL- 309
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + IL
Sbjct: 203 FLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
Query: 310 ----------------KGGVDFESEP------WLLI---SDS-AKDLVRKMLIQDPKKRI 343
K +S P W + SDS A DL+ +ML +P KRI
Sbjct: 263 ILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRI 322
Query: 344 TSAEVLEHPWMREGGEASDKPIG 366
T E L HP++ + + +D+P+
Sbjct: 323 TVEEALAHPYLEQYYDPTDEPVA 345
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 85
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 142
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 249
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 250 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 305
Query: 381 KLKKM 385
+L +
Sbjct: 306 RLTPL 310
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 86
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 143
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 201
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 250
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 251 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 306
Query: 381 KLKKM 385
+L +
Sbjct: 307 RLTPL 311
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 73
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 130
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 237
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 381 KLKKM 385
+L +
Sbjct: 294 RLTPL 298
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 40/301 (13%)
Query: 56 MSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE 115
M P P P+ QP K+ RP T+ + + K++GRGQF Y
Sbjct: 8 MQGP-PVPQFQPQKA----LRPDMGYNTLAN---------FRIEKKIGRGQFSEVYRAAC 53
Query: 116 NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVME 175
G A K + L++ + R D +EI +++ L+ N++++ ++ + +++V+E
Sbjct: 54 LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLE 112
Query: 176 LCSGGELFDKIIAQGHYTE-----------KAAAALCRAIVNVVHHCHFMGVMHRDLKPE 224
L G+L I H+ + K LC A+ H H VMHRD+KP
Sbjct: 113 LADAGDLSRMI---KHFKKQKRLIPERTVWKYFVQLCSAL----EHMHSRRVMHRDIKPA 165
Query: 225 NFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSA 282
N ++ ++K D GL F + +VG+ YY++PE + + Y + D+WS
Sbjct: 166 NVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222
Query: 283 GVILYILLSGVPPFWAETEKGIFDAILK-GGVDFESEPWLLISDSAKDLVRKMLIQDPKK 341
G +LY + + PF+ + + ++ K D+ P S+ + LV + DP+K
Sbjct: 223 GCLLYEMAALQSPFYGD-KMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEK 281
Query: 342 R 342
R
Sbjct: 282 R 282
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 73
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 130
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 237
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 381 KLKKM 385
+L +
Sbjct: 294 RLTPL 298
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 77
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 134
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 192
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 241
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 242 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 297
Query: 381 KLKKM 385
+L +
Sbjct: 298 RLTPL 302
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 74
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 131
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 189
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 238
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 239 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 294
Query: 381 KLKKM 385
+L +
Sbjct: 295 RLTPL 299
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 73
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 130
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 237
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 381 KLKKM 385
+L +
Sbjct: 294 RLTPL 298
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A K I ++ +
Sbjct: 15 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQR 71
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSND 128
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 185
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 95 FYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ 154
F+ + ELG FG Y T A K I + ++++ ED EI I+
Sbjct: 13 FWEIIGELG--DFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDH 66
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNVVHHCH 212
NIV+ A+ ++ +++E C+GG + D ++ + TE +C+ ++ +++ H
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH 125
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEVLR 270
++HRDLK N L + DG +K DFG+S + R +G+ Y++APEV+
Sbjct: 126 DNKIIHRDLKAGNILFT-LDGD--IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 271 ------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP--WLL 322
R Y + DVWS G+ L + PP + I K ++P W
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW-- 240
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPI 365
S + KD ++K L ++ R T++++L+HP++ S+KPI
Sbjct: 241 -SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 279
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L QD+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLD-HC 73
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 130
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 237
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 381 KLKKM 385
+L +
Sbjct: 294 RLTPL 298
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 152/314 (48%), Gaps = 22/314 (7%)
Query: 70 SSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK 129
S A S VQ P + + D + +T + +G+G FG + +N T A K I
Sbjct: 1 SMAHSPVAVQVPG--MQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII-- 56
Query: 130 RKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ 189
+ + EDI++EI ++ + ++ G+Y + ++ME GG D ++
Sbjct: 57 DLEEAEDEIEDIQQEITVLSQCDSSY-VTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRA 114
Query: 190 GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
G + E A + + I+ + + H +HRD+K N LLS + +K DFG++ +
Sbjct: 115 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD---VKLADFGVAGQLT 171
Query: 250 EGKVYRD-IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDA 307
+ ++ R+ VG+ +++APEV+++S Y + D+WS G+ L G PP +
Sbjct: 172 DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL 231
Query: 308 ILKGGVDFESEPWLLISD---SAKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKP 364
I K + P L+ D S K+ + L +DP R T+ E+L+H ++ + + +
Sbjct: 232 IPK------NNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTS-- 283
Query: 365 IGSAVLSRMKQFRA 378
+ ++ R K+++A
Sbjct: 284 YLTELIDRFKRWKA 297
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 144/326 (44%), Gaps = 47/326 (14%)
Query: 81 PETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED 140
PE V G+ + D+ YT +G G +G+ +N A + I ++ +
Sbjct: 15 PEMVRGQ-VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKI--SPFEHQTYCQR 71
Query: 141 IKREIQIM-----QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEK 195
REI+I+ +++ G +I+ E + V++V +L +L+ K++ H +
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSND 128
Query: 196 AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK--- 252
I+ + + H V+HRDLKP N LL+ LK DFGL+ D
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHT 185
Query: 253 -VYRDIVGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI- 308
+ V + +Y APE++ S Y K ID+WS G IL +LS P F + + I
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 309 ----------LKGGVDFESEPWLLI---------------SDS-AKDLVRKMLIQDPKKR 342
L ++ ++ +LL +DS A DL+ KML +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 343 ITSAEVLEHPWMREGGEASDKPIGSA 368
I + L HP++ + + SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+D + ++ +E+G G FG Y + A K + + + +DI +E++ +Q
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L N +++RG Y + LVME C G + + E AA+ + +
Sbjct: 110 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H ++HRD+K N LLS ++K DFG + + + VG+ Y++APEV+
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPANXF---VGTPYWMAPEVI 222
Query: 270 ----RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWLLIS 324
Y ++DVWS G+ L PP F ++ +S W S
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---S 279
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351
+ ++ V L + P+ R TS +L+H
Sbjct: 280 EYFRNFVDSCLQKIPQDRPTSEVLLKH 306
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + +V + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + A LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS GVI+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
+D + ++ +E+G G FG Y + A K + + + +DI +E++ +Q
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L N +++RG Y + LVME C G + + E AA+ + +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H ++HRD+K N LLS ++K DFG + + + VG+ Y++APEV+
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPANXF---VGTPYWMAPEVI 183
Query: 270 ----RRSYGKEIDVWSAGVILYILLSGVPP-FWAETEKGIFDAILKGGVDFESEPWLLIS 324
Y ++DVWS G+ L PP F ++ +S W S
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---S 240
Query: 325 DSAKDLVRKMLIQDPKKRITSAEVLEH 351
+ ++ V L + P+ R TS +L+H
Sbjct: 241 EYFRNFVDSCLQKIPQDRPTSEVLLKH 267
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + +V + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + A LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS GVI+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+++ + +GRG FG Y C + TG YA K + K+++ KQ E + +IM L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 248
Query: 156 N---IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ IV A+ + +++L +GG+L + G ++E I+ + H H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR- 271
V++RDLKP N LL D ++ +D GL+ + K + VG+ Y+APEVL++
Sbjct: 309 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 272 -SYGKEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVDFESEPWLLISDSA 327
+Y D +S G +L+ LL G PF K I L V+ S
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS----FSPEL 420
Query: 328 KDLVRKMLIQDPKKRI-----TSAEVLEHPWMR 355
+ L+ +L +D +R+ + EV E P+ R
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+++ + +GRG FG Y C + TG YA K + K+++ KQ E + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 156 N---IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ IV A+ + +++L +GG+L + G ++E I+ + H H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR- 271
V++RDLKP N LL D ++ +D GL+ + K + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 272 -SYGKEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVDFESEPWLLISDSA 327
+Y D +S G +L+ LL G PF K I L V+ S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS----FSPEL 421
Query: 328 KDLVRKMLIQDPKKRI-----TSAEVLEHPWMR 355
+ L+ +L +D +R+ + EV E P+ R
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L+ K RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-HC 73
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 130
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 237
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 381 KLKKM 385
+L +
Sbjct: 294 RLTPL 298
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 6/146 (4%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
L+EE+ + ++ F DTD SGTI +ELK + LG + + E+K+++ D DG+GT
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 453 IDYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEAS 508
ID+ EF+ + ERD E + KAF+ FD D +G I+ L+ K+ G + DE
Sbjct: 61 IDFEEFLQMMTAKMG-ERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDE-E 118
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMR 534
++E+I E D D DG +N EEF +M+
Sbjct: 119 LQEMIDEADRDGDGEVNEEEFFRIMK 144
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+++ + +GRG FG Y C + TG YA K + K+++ KQ E + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 156 N---IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ IV A+ + +++L +GG+L + G ++E I+ + H H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR- 271
V++RDLKP N LL D ++ +D GL+ + K + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 272 -SYGKEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVDFESEPWLLISDSA 327
+Y D +S G +L+ LL G PF K I L V+ S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS----FSPEL 421
Query: 328 KDLVRKMLIQDPKKRI-----TSAEVLEHPWMR 355
+ L+ +L +D +R+ + EV E P+ R
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
+++ + +GRG FG Y C + TG YA K + K+++ KQ E + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 156 N---IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ IV A+ + +++L +GG+L + G ++E I+ + H H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR- 271
V++RDLKP N LL D ++ +D GL+ + K + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 272 -SYGKEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAILKGGVDFESEPWLLISDSA 327
+Y D +S G +L+ LL G PF K I L V+ S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS----FSPEL 421
Query: 328 KDLVRKMLIQDPKKRI-----TSAEVLEHPWMR 355
+ L+ +L +D +R+ + EV E P+ R
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 43/305 (14%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L+ K RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-HC 73
Query: 156 NIVEFRGAY----EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV---- 207
NIV R + E + V+L + L E ++ HY+ +A L V +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPVIYVKLYMYQ 130
Query: 208 ----VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S YY
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL 321
APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEIIK 237
Query: 322 LISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRAMN 380
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 238 VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTPTA 293
Query: 381 KLKKM 385
+L +
Sbjct: 294 RLTPL 298
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQ 149
Y +++G G +G+ Y ++S G A K I + D ED REI +++
Sbjct: 23 YQKLEKVGEGTYGVVYK-AKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLK 74
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNV 207
L NIV + + LV E K++ + + ++
Sbjct: 75 ELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAP 266
V HCH ++HRDLKP+N L+ N DG LK DFGL+ F + Y V + +Y AP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLI-NSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--------------- 309
+VL + Y +D+WS G I +++G P F T+ I
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 310 -------KGGVDFESEPWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ FE +PW I DL+ ML DP KRI++ + + HP+ ++
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED------IKREIQIMQ 149
Y +++G G +G+ Y ++S G A K I + D ED REI +++
Sbjct: 23 YQKLEKVGEGTYGVVYK-AKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLK 74
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVNV 207
L NIV + + LV E K++ + + ++
Sbjct: 75 ELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAP 266
V HCH ++HRDLKP+N L+ N DG LK DFGL+ F + Y V + +Y AP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLI-NSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAIL--------------- 309
+VL + Y +D+WS G I +++G P F T+ I
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 310 -------KGGVDFESEPWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ FE +PW I DL+ ML DP KRI++ + + HP+ ++
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 132/331 (39%), Gaps = 71/331 (21%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P + + Y + K +G+G FG ++ A K + K ++Q E EI+I
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRI 146
Query: 148 MQHLSGQ-----QNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAAL 200
++HL Q N++ + R + + EL S EL K QG ++
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
+I+ + H ++H DLKPEN LL + G + +K DFG S + + +VY I S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQ-GRSGIKVIDFGSSCY-EHQRVYXXI-QS 262
Query: 261 AYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE---------------KGI 304
+Y APEV L YG ID+WS G IL LL+G P E E + +
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKL 322
Query: 305 FDA---------------------------ILKGGVDF--------ESEPWLLISDSAKD 329
DA +L GG ES W D
Sbjct: 323 LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382
Query: 330 -----LVRKMLIQDPKKRITSAEVLEHPWMR 355
+++ L DP R+T + L HPW+R
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 132/331 (39%), Gaps = 71/331 (21%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P + + Y + K +G+G FG ++ A K + K ++Q E EI+I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRI 146
Query: 148 MQHLSGQ-----QNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAAL 200
++HL Q N++ + R + + EL S EL K QG ++
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
+I+ + H ++H DLKPEN LL + G + +K DFG S + + +VY I S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQ-GRSGIKVIDFGSSCY-EHQRVYTXI-QS 262
Query: 261 AYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE---------------KGI 304
+Y APEV L YG ID+WS G IL LL+G P E E + +
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
Query: 305 FDA---------------------------ILKGGVDF--------ESEPWLLISDSAKD 329
DA +L GG ES W D
Sbjct: 323 LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382
Query: 330 -----LVRKMLIQDPKKRITSAEVLEHPWMR 355
+++ L DP R+T + L HPW+R
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 47/307 (15%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ Y +G A K +L+ K RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-HC 73
Query: 156 NIVEFR------GAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV-- 207
NIV R G +D ++LV++ + + +A L V +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-----TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 208 ------VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261
+ + H G+ HRD+KP+N LL A+LK DFG + + G+ + S
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 262 YYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEP 319
YY APE++ Y IDVWSAG +L LL G P F ++ GVD E
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----------GVDQLVEI 235
Query: 320 WLLISDSAKDLVRKMLIQDPK-KRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRA 378
++ ++ +R+M +P ++ HPW + P A+ SR+ ++
Sbjct: 236 IKVLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKV-FRPRTPPEAIALCSRLLEYTP 291
Query: 379 MNKLKKM 385
+L +
Sbjct: 292 TARLTPL 298
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + +V + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + A LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 132/331 (39%), Gaps = 71/331 (21%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P + + Y + K +G+G FG ++ A K + K ++Q E EI+I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRI 146
Query: 148 MQHLSGQ-----QNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAAL 200
++HL Q N++ + R + + EL S EL K QG ++
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS 260
+I+ + H ++H DLKPEN LL + G + +K DFG S + + +VY I S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQ-GRSGIKVIDFGSSCY-EHQRVYTXI-QS 262
Query: 261 AYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETE---------------KGI 304
+Y APEV L YG ID+WS G IL LL+G P E E + +
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
Query: 305 FDA---------------------------ILKGGVDF--------ESEPWLLISDSAKD 329
DA +L GG ES W D
Sbjct: 323 LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382
Query: 330 -----LVRKMLIQDPKKRITSAEVLEHPWMR 355
+++ L DP R+T + L HPW+R
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVN-HKNIIS 87
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I Q + + L ++ + H H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVI-QMELDHERMSYLLYQMLXGIKHLHS 144
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 5/147 (3%)
Query: 390 IAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDG 449
+++ L+EE+I K FA D D SG+I+ EL T + LG SE EV LM+ DVDG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 450 NGTIDYIEFISATMHRYRL-ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDE 506
N I++ EF++ + + + ++ L +AF+ FDK+ G I+ EL+ + G + D
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD- 119
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMM 533
A + E++ EV +D G IN ++F ++
Sbjct: 120 AEVDEMLREV-SDGSGEINIKQFAALL 145
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + +T +G+G FG Y +N T A K I + + EDI++EI ++
Sbjct: 16 DPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITVLSQ 73
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
I + G+Y + ++ME GG D ++ G E A + R I+ + +
Sbjct: 74 CDSPY-ITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDY 131
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H +HRD+K N LLS + +K DFG++ + + ++ R+ VG+ +++APEV+
Sbjct: 132 LHSERKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL--LISDS 326
++S Y + D+WS G+ L G PP + I K S P L S
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-----SPPTLEGQHSKP 243
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWM 354
K+ V L +DP+ R T+ E+L+H ++
Sbjct: 244 FKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 18/292 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + +T +++G+G FG + +N T A K I + + EDI++EI ++
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQ 76
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ ++ G+Y + ++ME GG D ++ G E A + R I+ + +
Sbjct: 77 CDSPY-VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 134
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H +HRD+K N LLS +K DFG++ + + ++ R+ VG+ +++APEV+
Sbjct: 135 LHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISDS 326
++S Y + D+WS G+ L G PP + I K + P L S
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-----NPPTLEGNYSKP 246
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRA 378
K+ V L ++P R T+ E+L+H ++ + + + ++ R K+++A
Sbjct: 247 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 296
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 18/226 (7%)
Query: 143 REIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA--AAAL 200
RE+Q+++ N++ + +DRQ ++ +ELC+ + + Q + L
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAAT--LQEYVEQKDFAHLGLEPITL 123
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKA--TDFGLSVFIDEGK----VY 254
+ + + H H + ++HRDLKP N L+S + +KA +DFGL + G+
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 255 RDIVGSAYYVAPEVL----RRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAIL 309
+ G+ ++APE+L + + +D++SAG + Y ++S G PF ++ IL
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NIL 241
Query: 310 KGGVDFES-EPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G + P A++L+ KM+ DP+KR ++ VL+HP+
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K FA D D +G+I+ EL T + LG SE EV LM+ DVDGN I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIK 510
++ EF+ A M R D + L +AF+ FDK+ G I+ EL+ + G +A +
Sbjct: 65 EFSEFL-ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Query: 511 EIISEVDTDNDGRINYEEFCTMMRSGT 537
+++ EV +D G IN ++F ++ G+
Sbjct: 124 DMLREV-SDGSGEINIQQFAALLSKGS 149
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVN-HKNIIS 87
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCGI-KHLHS 144
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 125
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 182
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 183 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 299
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 300 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 126/283 (44%), Gaps = 43/283 (15%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-----IKREIQIMQHLSGQQN 156
LG GQF Y + +T A K I KL ++ + +D REI+++Q LS N
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQELS-HPN 73
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY--TEKAAAALCRAIVNVVHHCHFM 214
I+ A+ + ++ LV + + II T A + + + H
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RR 271
++HRDLKP N LL D +LK DFGL+ F + Y V + +Y APE+L R
Sbjct: 132 WILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETE----KGIFDAI-------------LKGGVD 314
YG +D+W+ G IL LL VP +++ IF+ + L V
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
Query: 315 FESEPWLLI-------SDSAKDLVRKMLIQDPKKRITSAEVLE 350
F+S P + + D DL++ + + +P RIT+ + L+
Sbjct: 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 87
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I Q + + L ++ + H H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVI-QMELDHERMSYLLYQMLXGIKHLHS 144
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 18/292 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + +T +++G+G FG + +N T A K I + + EDI++EI ++
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQ 61
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ ++ G+Y + ++ME GG D ++ G E A + R I+ + +
Sbjct: 62 CDSPY-VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 119
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H +HRD+K N LLS +K DFG++ + + ++ R+ VG+ +++APEV+
Sbjct: 120 LHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 176
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISDS 326
++S Y + D+WS G+ L G PP + I K + P L S
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-----NPPTLEGNYSKP 231
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRA 378
K+ V L ++P R T+ E+L+H ++ + + + ++ R K+++A
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 281
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 128/307 (41%), Gaps = 57/307 (18%)
Query: 103 GRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS--GQQNIVEF 160
G+G FG L E STG S A K ++ QD RE+QIMQ L+ NIV+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVI-------QDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 161 RGAY-----EDRQSVHL--VMEL-------CSGGELFDKIIAQGHYTEKAAAALCRAIVN 206
+ + DR+ ++L VME C ++ + L R+I
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 207 VVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAP 266
+ H + V HRD+KP N L++ DG LK DFG + + + + S YY AP
Sbjct: 145 L--HLPSVNVCHRDIKPHNVLVNEADG--TLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
Query: 267 EVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK-------------- 310
E++ + Y +D+WS G I ++ G P F + G I++
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN 260
Query: 311 ---GGVDFESE---PW--------LLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
VD + PW L + A DL+ +L P++R+ E L HP+ E
Sbjct: 261 PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320
Query: 357 GGEASDK 363
+ + K
Sbjct: 321 LHDPATK 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 80
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I Q + + L ++ + H H
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVI-QMELDHERMSYLLYQMLXGIKHLHS 137
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 138 AGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 18/292 (6%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + +T +++G+G FG + +N T A K I + + EDI++EI ++
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQ 61
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ ++ G+Y + ++ME GG D ++ G E A + R I+ + +
Sbjct: 62 CDSPY-VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 119
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H +HRD+K N LLS +K DFG++ + + ++ R+ VG+ +++APEV+
Sbjct: 120 LHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISDS 326
++S Y + D+WS G+ L G PP + I K + P L S
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-----NPPTLEGNYSKP 231
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIGSAVLSRMKQFRA 378
K+ V L ++P R T+ E+L+H ++ + + + ++ R K+++A
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 281
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K F D + +G I EL T + LG +E E++ L+ A+ + NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 454 DYIEFISATMHRYR-LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
++ EF + R + +E + +AF+ FD+D G+I+ EL M + G + DE I
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDE-EID 122
Query: 511 EIISEVDTDNDGRINYEEFCTMM 533
E+I E D D DG INYEEF M+
Sbjct: 123 EMIREADFDGDGMINYEEFVWMI 145
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADV 447
K + E +EEE ++ F D D G I+ EL+ + LG K+++ E+ +++ AD
Sbjct: 74 KQMRETDTEEE---MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADF 130
Query: 448 DGNGTIDYIEFI 459
DG+G I+Y EF+
Sbjct: 131 DGDGMINYEEFV 142
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 125
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 182
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 183 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 299
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 300 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 87
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 144
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 88
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 145
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 146 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 262
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 263 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 88
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 145
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 146 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 262
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 263 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 87
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 144
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 86
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 143
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 144 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 200
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 201 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 260
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 261 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVN-HKNIIS 87
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 144
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 145 AGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 261
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 262 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 81
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 138
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 139 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 255
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 256 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D + +T +++G+G FG + +N T A K I + + EDI++EI ++
Sbjct: 24 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQ 81
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
+ ++ G+Y + ++ME GG D ++ G E A + R I+ + +
Sbjct: 82 CDSPY-VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 139
Query: 211 CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD-IVGSAYYVAPEVL 269
H +HRD+K N LLS +K DFG++ + + ++ R+ VG+ +++APEV+
Sbjct: 140 LHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISDS 326
++S Y + D+WS G+ L G PP + I K + P L S
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-----NPPTLEGNYSKP 251
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWM 354
K+ V L ++P R T+ E+L+H ++
Sbjct: 252 LKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 81
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 138
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 139 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 255
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 256 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
K +G G GI + + A K L R N+ + RE+ +M+ ++ +NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVN-HKNIIS 80
Query: 160 FRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
+ E+ Q V+LVMEL ++I E+ + L + + + H H
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHS 137
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRS 272
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 138 AGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 273 YGKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAIL 309
Y + +D+WS G I+ IL G P F + + + + +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 310 K----GGVDF-----------ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G+ F +SE L + A+DL+ KML+ DP KRI+ + L+HP++
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + A LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + A LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 138/322 (42%), Gaps = 56/322 (17%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D+ Y K LG G G+ + +N A K I+ L + Q + REI+I++
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRR 64
Query: 151 LSGQQNIVEF--------------RGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
L NIV+ G+ + SV++V E ++ QG E+
Sbjct: 65 LD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEH 121
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-----EG 251
A ++ + + H V+HRDLKP N ++ +D +LK DFGL+ +D +G
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED--LVLKIGDFGLARIMDPHYSHKG 179
Query: 252 KVYRDIVGSAYYVAPEVLR--RSYGKEIDVWSAGVILYILLSG----------------- 292
+ +V + +Y +P +L +Y K ID+W+AG I +L+G
Sbjct: 180 HLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 293 --VPPFWAETEKGIFDAILKGGVDFESEPW-----LL--ISDSAKDLVRKMLIQDPKKRI 343
+P E + + I + +EP LL IS A D + ++L P R+
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 344 TSAEVLEHPWMREGGEASDKPI 365
T+ E L HP+M D+PI
Sbjct: 299 TAEEALSHPYMSIYSFPMDEPI 320
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 9 LAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 67
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQ 124
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 179
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 240 AELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 297 QALAHAYFAQYHDPDDEPVA 316
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMA--GFV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMA--GFV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 67
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMA--GFV 179
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 240 AELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 297 QALAHAYFAQYHDPDDEPVA 316
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 146/337 (43%), Gaps = 51/337 (15%)
Query: 68 MKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSI 127
+S+A+ RP + L K + ++ + Y +G G +G + TG A K
Sbjct: 20 FQSNASQERPTFYRQE-LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK- 77
Query: 128 LKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGE 181
L R + + RE+++++H+ +N++ + E+ V+LV L G +
Sbjct: 78 LSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GAD 135
Query: 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241
L + I+ T+ L I+ + + H ++HRDLKP N L N+D LK D
Sbjct: 136 L-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILD 191
Query: 242 FGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAE 299
FGL+ D+ V + +Y APE++ Y + +D+WS G I+ LL+G F
Sbjct: 192 FGLARHTDDEM--XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
Query: 300 TEKGIFDAILK----GGVDFESEPWLLISDSAK--------------------------D 329
IL+ G + + + S+SA+ D
Sbjct: 250 DHIDQLKLILRLVGTPGAELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVD 306
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
L+ KML+ D KRIT+A+ L H + + + D+P+
Sbjct: 307 LLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 343
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 145/338 (42%), Gaps = 51/338 (15%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P S + RP + L K + ++ + Y +G G +G + TG+ A K
Sbjct: 16 PRGSHMSQERPTFYRQE-LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGG 180
L R + + RE+++++H+ +N++ + E+ V+LV L G
Sbjct: 75 -LSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 131
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
+L + I+ T+ L I+ + + H ++HRDLKP N L N+D LK
Sbjct: 132 DL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKIL 187
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWA 298
DFGL+ D+ V + +Y APE++ Y + +D+WS G I+ LL+G F
Sbjct: 188 DFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
Query: 299 ETEKGIFDAILK----GGVDFESEPWLLISDSAK-------------------------- 328
IL+ G + + + S+SA+
Sbjct: 246 TDHIDQLKLILRLVGTPGAELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAV 302
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
DL+ KML+ D KRIT+A+ L H + + + D+P+
Sbjct: 303 DLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 51/338 (15%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P S + RP + L K + ++ + Y +G G +G + TG+ A K
Sbjct: 15 PRGSHMSQERPTFYRQE-LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 73
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGG 180
L R + + RE+++++H+ +N++ + E+ V+LV L G
Sbjct: 74 -LSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--G 129
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
+ I+ T+ L I+ + + H ++HRDLKP N L N+D LK
Sbjct: 130 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKIL 186
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWA 298
DFGL+ D+ V + +Y APE++ Y + +D+WS G I+ LL+G F
Sbjct: 187 DFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
Query: 299 ETEKGIFDAILK----GGVDFESEPWLLISDSAK-------------------------- 328
IL+ G + + + S+SA+
Sbjct: 245 TDHIDQLKLILRLVGTPGAELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAV 301
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
DL+ KML+ D KRIT+A+ L H + + + D+P+
Sbjct: 302 DLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 77
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 189
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 250 AELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 307 QALAHAYFAQYHDPDDEPVA 326
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 67
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 179
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 240 AELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 297 QALAHAYFAQYHDPDDEPVA 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 56/349 (16%)
Query: 77 PVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ 136
P ++ ++V +++ ++ L K +G+G FG + TG A K +L + N++
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVL---MENEK 57
Query: 137 DREDIK--REIQIMQHLSGQQ--NIVEF---RGAYEDR--QSVHLVMELCSG--GELFDK 185
+ I REI+I+Q L + N++E + + +R S++LV + C L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 186 IIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
++ + +T + + ++N +++ H ++HRD+K N L++ +DG +LK DFGL+
Sbjct: 118 VLVK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDG--VLKLADFGLA 172
Query: 246 VFIDEGK-----VYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWA 298
K Y + V + +Y PE+L R YG ID+W AG I+ + + P
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
Query: 299 ETEKGIFDAILKGGVDFESEPWLLISD----------------------------SAKDL 330
TE+ I + E W + + A DL
Sbjct: 233 NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL 292
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEASD-KPIGSAVLSRMKQFRA 378
+ K+L+ DP +RI S + L H + SD K + S L+ M ++ A
Sbjct: 293 IDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLA 341
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 23 LNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 81
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 82 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 138
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 139 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 193
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 254 AELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 310
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 311 QALAHAYFAQYHDPDDEPVA 330
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 51/338 (15%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P S + RP + L K + ++ + Y +G G +G + TG+ A K
Sbjct: 16 PRGSHMSQERPTFYRQE-LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGG 180
L R + + RE+++++H+ +N++ + E+ V+LV L G
Sbjct: 75 -LSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--G 130
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
+ I+ T+ L I+ + + H ++HRDLKP N L N+D LK
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKIL 187
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWA 298
DFGL+ D+ V + +Y APE++ Y + +D+WS G I+ LL+G F
Sbjct: 188 DFGLARHTDDE--MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
Query: 299 ETEKGIFDAILK----GGVDFESEPWLLISDSAK-------------------------- 328
IL+ G + + + S+SA+
Sbjct: 246 TDHIDQLKLILRLVGTPGAELLKK---ISSESARNYIQSLAQMPKMNFANVFIGANPLAV 302
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
DL+ KML+ D KRIT+A+ L H + + + D+P+
Sbjct: 303 DLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 139/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ + Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKSQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDSE--LKILDFGLCRHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K FA D D +G+I+ EL T + LG SE EV LM+ DVDGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIK 510
++ EF+ A M R D + L +AF+ FDK+ G I+ EL+ + G +A +
Sbjct: 64 EFSEFL-ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Query: 511 EIISEVDTDNDGRINYEEFCTMM 533
+++ EV +D G IN ++F ++
Sbjct: 123 DMLREV-SDGSGEINIQQFAALL 144
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 34/284 (11%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLS 152
R + + K +GRG F + TG YA K + K ++ + + + E ++ +
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-G 118
Query: 153 GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCR----AIVNVV 208
++ I + A++D ++LVME GG+L + + E+ A + R IV +
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL---SKFGERIPAEMARFYLAEIVMAI 175
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV--GSAYYVAP 266
H +G +HRD+KP+N LL D ++ DFG + + R +V G+ Y++P
Sbjct: 176 DSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSP 232
Query: 267 EVLR--------RSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESE 318
E+L+ SYG E D W+ GV Y + G PF+A++ + I V ++
Sbjct: 233 EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI----VHYKEH 288
Query: 319 PWLLISD-----SAKDLVRKMLIQDPKKRI---TSAEVLEHPWM 354
L + D A+D ++++L P+ R+ + + HP+
Sbjct: 289 LSLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPFF 331
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 73
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDSE--LKILDFGLARHTDDEMT--GYV 185
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 246 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 303 QALAHAYFAQYHDPDDEPVA 322
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 77
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDSE--LKILDFGLARHTDDEMT--GYV 189
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 250 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 307 QALAHAYFAQYHDPDDEPVA 326
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 32 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 90
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 147
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 148 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 264
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 265 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 117/269 (43%), Gaps = 23/269 (8%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
E+GRG +G +G A K I R V++++++ + ++ ++ S IV+F
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 161 RGAYEDRQSVHLVMELCSGGELFDKI------IAQGHYTEKAAAALCRAIVNVVHHC-HF 213
GA + MEL S FDK + E+ + A V ++H
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 214 MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--- 269
+ ++HRD+KP N LL D +K DFG+S +D RD G Y+APE +
Sbjct: 145 LKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPS 200
Query: 270 --RRSYGKEIDVWSAGVILYILLSGVPPF--WAETEKGIFDAILKGGVDFESEPWLLISD 325
R+ Y DVWS G+ LY L +G P+ W + + + S
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSP 260
Query: 326 SAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
S + V L +D KR E+L+HP++
Sbjct: 261 SFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 128/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ IL G P F + + + + +
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 78
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 190
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 251 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 308 QALAHAYFAQYHDPDDEPVA 327
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 138/332 (41%), Gaps = 51/332 (15%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P+ S + S R +G + + Y K +G G GI + + A K
Sbjct: 2 PLGSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 61
Query: 127 ILKRKLVNKQDREDIKREIQIMQ-----HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGE 181
L R N+ + RE+ +M+ ++ G N+ + + E+ Q V++VMEL
Sbjct: 62 -LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN- 119
Query: 182 LFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATD 241
++I E+ + L + + + H H G++HRDLKP N ++ + LK D
Sbjct: 120 -LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVVKS---DCTLKILD 174
Query: 242 FGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVIL------YILLSG-- 292
FGL+ + V + YY APEV L Y + +D+WS G I+ IL G
Sbjct: 175 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD 234
Query: 293 ---------------VPPFWAETEKGIFDAILK----GGVDFE-----------SEPWLL 322
P F + + + + G FE SE L
Sbjct: 235 YIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKL 294
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 295 KASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 51/338 (15%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P S + RP + L K + ++ + Y +G G +G + TG A K
Sbjct: 16 PRGSHMSQERPTFYRQE-LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 74
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGG 180
L R + + RE+++++H+ +N++ + E+ V+LV L G
Sbjct: 75 -LSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 131
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
+L + I+ T+ L I+ + + H ++HRDLKP N L N+D LK
Sbjct: 132 DL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKIL 187
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWA 298
DFGL+ D+ V + +Y APE++ Y + +D+WS G I+ LL+G F
Sbjct: 188 DFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
Query: 299 ETEKGIFDAILK----GGVDFESEPWLLISDSAK-------------------------- 328
IL+ G + + + S+SA+
Sbjct: 246 TDHIDQLKLILRLVGTPGAELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAV 302
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
DL+ KML+ D KRIT+A+ L H + + + D+P+
Sbjct: 303 DLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 76
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLARHTDDEMT--GYV 188
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 249 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 306 QALAHAYFAQYHDPDDEPVA 325
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 51/338 (15%)
Query: 67 PMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
P S + RP + L K + ++ + Y +G G +G + TG A K
Sbjct: 15 PRGSHMSQERPTFYRQE-LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 73
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGG 180
L R + + RE+++++H+ +N++ + E+ V+LV L G
Sbjct: 74 -LSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 130
Query: 181 ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKAT 240
+L + I+ T+ L I+ + + H ++HRDLKP N L N+D LK
Sbjct: 131 DL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKIL 186
Query: 241 DFGLSVFIDEGKVYRDIVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWA 298
DFGL+ D+ V + +Y APE++ Y + +D+WS G I+ LL+G F
Sbjct: 187 DFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
Query: 299 ETEKGIFDAILK----GGVDFESEPWLLISDSAK-------------------------- 328
IL+ G + + + S+SA+
Sbjct: 245 TDHIDQLKLILRLVGTPGAELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAV 301
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
DL+ KML+ D KRIT+A+ L H + + + D+P+
Sbjct: 302 DLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 120/278 (43%), Gaps = 43/278 (15%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-IKREIQIMQHLSGQQNIVEF 160
L G F Y + +G YA LKR L N++++ I +E+ M+ LSG NIV+F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYA----LKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 161 RGAYE--------DRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
A + L+ ELC G E K+ ++G + + V H
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 211 CHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY------RDIV---- 258
H ++HRDLK EN LLSN+ +K DFG + I Y R +V
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 259 ---GSAYYVAPEVL----RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311
+ Y PE++ G++ D+W+ G ILY+L PF E G I+ G
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNG 264
Query: 312 GVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
+ P L+R ML +P++R++ AEV+
Sbjct: 265 --KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 73
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 185
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 246 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 303 QALAHAYFAQYHDPDDEPVA 322
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 73
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 185
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 246 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 303 QALAHAYFAQYHDPDDEPVA 322
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 76
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 188
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 249 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 306 QALAHAYFAQYHDPDDEPVA 325
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 12 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 70
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 71 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 127
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 128 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 182
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 243 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 299
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 300 QALAHAYFAQYHDPDDEPVA 319
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 73
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 185
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 246 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 303 QALAHAYFAQYHDPDDEPVA 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 89
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 146
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 147 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 263
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 264 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 83
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 140
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 195
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 256 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 313 QALAHAYFAQYHDPDDEPVA 332
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 82
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 83 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 139
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 194
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 255 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 312 QALAHAYFAQYHDPDDEPVA 331
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 83
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 140
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 195
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 256 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 313 QALAHAYFAQYHDPDDEPVA 332
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 11 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 69
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 70 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 126
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 127 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 181
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 241
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 242 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 298
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 299 QALAHAYFAQYHDPDDEPVA 318
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 77
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 189
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 250 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 307 QALAHAYFAQYHDPDDEPVA 326
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 77
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 189
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 250 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 307 QALAHAYFAQYHDPDDEPVA 326
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 76
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLARHTDDEMT--GYV 188
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 249 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 306 QALAHAYFAQYHDPDDEPVA 325
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 76
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 188
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 249 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 306 QALAHAYFAQYHDPDDEPVA 325
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 82
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 83 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 139
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNEDXE--LKILDFGLARHTDDEMT--GYV 194
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 255 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 312 QALAHAYFAQYHDPDDEPVA 331
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 27/265 (10%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 16 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 68
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S IDE + + VG+ Y++PE L+ + Y
Sbjct: 129 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDE--MANEFVGTRSYMSPERLQGTHY 183
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL---LISDSAKDL 330
+ D+WS G+ L + G P + D I+ E P L + S +D
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVN-----EPPPKLPSAVFSLEFQDF 238
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMR 355
V K LI++P +R +++ H +++
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GXV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 67
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 179
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 240 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 297 QALAHAYFAQYHDPDDEPVA 316
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 94
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 95 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 151
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 206
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 267 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 324 QALAHAYFAQYHDPDDEPVA 343
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 68
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 69 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 125
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 180
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 241 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 298 QALAHAYFAQYHDPDDEPVA 317
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 68
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 69 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 125
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 180
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 241 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 298 QALAHAYFAQYHDPDDEPVA 317
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 56/336 (16%)
Query: 90 EDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQI 147
+++ ++ L K +G+G FG + TG A K +L + N+++ I REI+I
Sbjct: 14 DEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVL---MENEKEGFPITALREIKI 69
Query: 148 MQHLSGQQ--NIVEF---RGAYEDRQ--SVHLVMELCSG--GELFDKIIAQGHYTEKAAA 198
+Q L + N++E + + +R S++LV + C L ++ + +T
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIK 127
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK-----V 253
+ + ++N +++ H ++HRD+K N L++ +DG +LK DFGL+ K
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDG--VLKLADFGLARAFSLAKNSQPNR 184
Query: 254 YRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKG 311
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+ I +
Sbjct: 185 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244
Query: 312 GVDFESEPWLLISD----------------------------SAKDLVRKMLIQDPKKRI 343
E W + + A DL+ K+L+ DP +RI
Sbjct: 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Query: 344 TSAEVLEHPWMREGGEASD-KPIGSAVLSRMKQFRA 378
S + L H + SD K + S L+ M ++ A
Sbjct: 305 DSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLA 340
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 23/277 (8%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
+I LG E+G G G + TG+ A K + R+ NK++ + I ++ ++
Sbjct: 23 EINDLENLG-EMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLK 79
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHH 210
IV+ G + V + MEL K QG E+ + AIV +++
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 211 C-HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
GV+HRD+KP N LL + +K DFG+S + + K G A Y+APE +
Sbjct: 140 LKEKHGVIHRDVKPSNILLDER---GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 270 ------RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL- 322
+ Y DVWS G+ L L +G P+ + K F+ + K + EP LL
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPY--KNCKTDFEVLTK---VLQEEPPLLP 251
Query: 323 ----ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
S + V+ L +D +KR ++LEH +++
Sbjct: 252 GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 147/332 (44%), Gaps = 55/332 (16%)
Query: 77 PVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ 136
P ++ ++V +++ ++ L K +G+G FG + TG A K +L + N++
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVL---MENEK 57
Query: 137 DREDIK--REIQIMQHLSGQQ--NIVEF---RGAYEDR--QSVHLVMELCSG--GELFDK 185
+ I REI+I+Q L + N++E + + +R S++LV + C L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN 117
Query: 186 IIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
++ + +T + + ++N +++ H ++HRD+K N L++ +DG +LK DFGL+
Sbjct: 118 VLVK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDG--VLKLADFGLA 172
Query: 246 VFIDEGK-----VYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWA 298
K Y + V + +Y PE+L R YG ID+W AG I+ + + P
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
Query: 299 ETEKGIFDAILKGGVDFESEPWLLISD----------------------------SAKDL 330
TE+ I + E W + + A DL
Sbjct: 233 NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL 292
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362
+ K+L+ DP +RI S + L H + SD
Sbjct: 293 IDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK----REIQIMQHLSGQQN 156
+LG G +G Y + T + A K I +L + + E + RE+ +++ L +N
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRI---RL--EHEEEGVPGTAIREVSLLKELQ-HRN 94
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGV 216
I+E + +HL+ E +L + + + + ++N V+ CH
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 217 MHRDLKPENFLLSNKDGG--AMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RR 271
+HRDLKP+N LLS D +LK DFGL+ F + + + + +Y PE+L R
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 272 SYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAILKGGVDFESEPWLLISDSA 327
Y +D+WS I +L P F ++E IF+ + G D + P +
Sbjct: 214 HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL--GLPDDTTWPGVTALPDW 271
Query: 328 KDLVRK------------------------MLIQDPKKRITSAEVLEHPWM 354
K K ML DP KRI++ LEHP+
Sbjct: 272 KQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVILYILLSG-----------------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ ++ G P F + + + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 129/308 (41%), Gaps = 59/308 (19%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
YT K +G G FG+ + + + A K +L QD+ RE+QIM+ +
Sbjct: 42 YTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVL-------QDKRFKNRELQIMR-IVKHP 92
Query: 156 NIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNV-- 207
N+V+ + + +D ++LV+E + + + K + ++ +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYM 147
Query: 208 ------VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSA 261
+ + H +G+ HRD+KP+N LL G +LK DFG + + G+ + S
Sbjct: 148 YQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG--VLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 262 YYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--------- 310
YY APE++ +Y ID+WS G ++ L+ G P F E+ I+K
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265
Query: 311 -----------GGVDFESEPWLLI-----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
P+ + A DL+ ++L P R+T+ E L HP+
Sbjct: 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
Query: 355 RE--GGEA 360
E GEA
Sbjct: 326 DELRTGEA 333
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 44/315 (13%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + +G A K L R + + RE
Sbjct: 42 LNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKK-LSRPFQSIIHAKRTYRE 100
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 101 LRLLKHMK-HENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 157
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 158 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 212
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYIL---------------------LSGVPP 295
+ +Y APE++ Y +D+WS G I+ L L+G PP
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPP 272
Query: 296 ------FWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVL 349
+ + +++ + ++ ++ + A DL+ KML+ D KRIT++E L
Sbjct: 273 ASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 350 EHPWMREGGEASDKP 364
HP+ + + D+P
Sbjct: 333 AHPYFSQYHDPDDEP 347
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 52/321 (16%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 78
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDI 257
L I+ + + H ++HRDLKP N L N+D LK DFGL+ DE Y
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY--- 189
Query: 258 VGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----G 311
V + +Y APE++ Y + +D+WS G I+ LL+G F IL+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 312 GVDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITS 345
G + + + S+SA+ DL+ KML+ D KRIT+
Sbjct: 250 GAELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 346 AEVLEHPWMREGGEASDKPIG 366
A+ L H + + + D+P+
Sbjct: 307 AQALAHAYFAQYHDPDDEPVA 327
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 52/321 (16%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 78
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDI 257
L I+ + + H ++HRDLKP N L N+D LK DFGL+ DE Y
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY--- 189
Query: 258 VGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----G 311
V + +Y APE++ Y + +D+WS G I+ LL+G F IL+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 312 GVDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITS 345
G + + + S+SA+ DL+ KML+ D KRIT+
Sbjct: 250 GAELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 346 AEVLEHPWMREGGEASDKPIG 366
A+ L H + + + D+P+
Sbjct: 307 AQALAHAYFAQYHDPDDEPVA 327
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 147/332 (44%), Gaps = 55/332 (16%)
Query: 77 PVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ 136
P ++ ++V +++ ++ L K +G+G FG + TG A K +L + N++
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAK-IGQGTFGEVFKARHRKTGQKVALKKVL---MENEK 57
Query: 137 DREDIK--REIQIMQHLSGQQ--NIVEF---RGAYEDRQ--SVHLVMELCSG--GELFDK 185
+ I REI+I+Q L + N++E + + +R S++LV + C L
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 186 IIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
++ + +T + + ++N +++ H ++HRD+K N L++ +DG +LK DFGL+
Sbjct: 118 VLVK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDG--VLKLADFGLA 172
Query: 246 VFIDEGK-----VYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWA 298
K Y + V + +Y PE+L R YG ID+W AG I+ + + P
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
Query: 299 ETEKGIFDAILKGGVDFESEPWLLISD----------------------------SAKDL 330
TE+ I + E W + + A DL
Sbjct: 233 NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL 292
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMREGGEASD 362
+ K+L+ DP +RI S + L H + SD
Sbjct: 293 IDKLLVLDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 52/321 (16%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 78
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDI 257
L I+ + + H ++HRDLKP N L N+D LK DFGL+ DE Y
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY--- 189
Query: 258 VGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----G 311
V + +Y APE++ Y + +D+WS G I+ LL+G F IL+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 312 GVDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITS 345
G + + + S+SA+ DL+ KML+ D KRIT+
Sbjct: 250 GAELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 346 AEVLEHPWMREGGEASDKPIG 366
A+ L H + + + D+P+
Sbjct: 307 AQALAHAYFAQYHDPDDEPVA 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 51/307 (16%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 24 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 82
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 139
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 140 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 274 GKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ IL G P F + + + +
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 256
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 257 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
Query: 356 EGGEASD 362
+ S+
Sbjct: 317 VWYDPSE 323
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 44/297 (14%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR---EDIKREIQIMQH 150
Q Y +++G G +G + T A LKR ++ D REI +++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVA----LKRVRLDDDDEGVPSSALREICLLKE 57
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVV 208
L +NIV + + LV E C + FD G + + ++ +
Sbjct: 58 LK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGL 114
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPE 267
CH V+HRDLKP+N LL N++G LK DFGL+ F + Y V + +Y P+
Sbjct: 115 GFCHSRNVLHRDLKPQN-LLINRNGE--LKLADFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 268 VL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE-----KGIFDAI----------LK 310
VL + Y ID+WSAG I L + P + + K IF + +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 311 GGVDFESEPWLLISDS-----------AKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
D++ P + S +DL++ +L +P +RI++ E L+HP+ +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK D+GL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDYGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L + + + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSKPFQSIIHAKRTYRE 83
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 140
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DFGL+ D+ V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT--GYV 195
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 256 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 313 QALAHAYFAQYHDPDDEPVA 332
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 137/305 (44%), Gaps = 49/305 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD--------------REDI 141
Y + + L +G+F LC +++ YA K K L K+D +D
Sbjct: 33 YRIIRTLNQGKFNKIILCEKDNKF--YALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 142 KREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGEL--FDK--IIAQGHYTE--- 194
K E+QI+ + + + G + V+++ E + FD+ + +YT
Sbjct: 91 KNELQIITDIKNEY-CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 195 -KAAAALCRAIVNVVHHCHF-MGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
+ + ++++N + H + HRD+KP N L+ D +K +DFG S ++ + K
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDKK 206
Query: 253 VYRDIVGSAYYVAPEVLRR--SY-GKEIDVWSAGVILYILLSGVPPFWAETE-KGIFDAI 308
+ + G+ ++ PE SY G ++D+WS G+ LY++ V PF + +F+ I
Sbjct: 207 I-KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 309 LKGGVDF--ESEPWL-------------LISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
+++ + +L +S+ D ++ L ++P +RITS + L+H W
Sbjct: 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325
Query: 354 MREGG 358
+ +
Sbjct: 326 LADTN 330
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 127/299 (42%), Gaps = 51/299 (17%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ-----HLSGQ 154
K +G G GI + + A K L R N+ + RE+ +M+ ++ G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM 214
N+ + + E+ Q V++VMEL ++I E+ + L + + + H H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSA 145
Query: 215 GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSY 273
G++HRDLKP N ++ + LK DFGL+ + V + YY APEV L Y
Sbjct: 146 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 274 GKEIDVWSAGVIL------YILLSG-----------------VPPFWAETEKGIFDAILK 310
+ +D+WS G I+ IL G P F + + + +
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 311 ----GGVDFE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G FE SE L + A+DL+ KML+ D KRI+ E L+HP++
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 44/309 (14%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
++R Y + +G G +G + TG A K L R ++ + RE+++++H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKK-LYRPFQSELFAKRAYRELRLLKH 80
Query: 151 LSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
+ +N++ + +D +LVM G K++ E L +
Sbjct: 81 MR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQM 137
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV 264
+ + + H G++HRDLKP N L N+D LK DFGL+ D V + +Y
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGN-LAVNED--CELKILDFGLARQADSE--MXGXVVTRWYR 192
Query: 265 APEVLRR--SYGKEIDVWSAGVILYILLSG---------------------VPP--FWAE 299
APEV+ Y + +D+WS G I+ +++G PP F
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 300 TEKGIFDAILKGGVDFESEPWLLI----SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
+ +KG + E + + I S A +L+ KML+ D ++R+T+ E L HP+
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
Query: 356 EGGEASDKP 364
+ D+P
Sbjct: 313 SLHDTEDEP 321
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 121/303 (39%), Gaps = 23/303 (7%)
Query: 60 QPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTG 119
Q QPR+ + A+ T +Q P +P +Q + LG G +G + G
Sbjct: 25 QLQPRRVSFRGEASET--LQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDG 82
Query: 120 NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179
YA K + +DR E+ + + V A+E+ ++L ELC G
Sbjct: 83 RLYAVKRSMS-PFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140
Query: 180 GELFDKIIAQG-HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLK 238
L A G E R + + H H G++H D+KP N L + K
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR---GRCK 197
Query: 239 ATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGV-ILYILLSGVPPF- 296
DFGL V + G Y+APE+L+ SYG DV+S G+ IL + + P
Sbjct: 198 LGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHG 257
Query: 297 ---WAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
W + +G G +S + ++ ML DPK R T+ +L P
Sbjct: 258 GEGWQQLRQGYLPPEFTAG----------LSSELRSVLVMMLEPDPKLRATAEALLALPV 307
Query: 354 MRE 356
+R+
Sbjct: 308 LRQ 310
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG+ A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK DF L+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDFYLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 454 DYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
D+ EF+ + + + + +E L + F+ FD++ GYI +EL + G + DE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDE- 129
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMM 533
I+ ++ + D +NDGRI+++EF MM
Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 477 AFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
AF FD D G I+ EL T M+ G + + II EVD D G I++EEF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 536 GTPQPAK 542
+ AK
Sbjct: 82 QMKEDAK 88
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K A+ SEEE L F D + G I EEL G +++ E++ LM D
Sbjct: 83 MKEDAKGKSEEE---LAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGD 139
Query: 447 VDGNGTIDYIEFI 459
+ +G ID+ EF+
Sbjct: 140 KNNDGRIDFDEFL 152
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+GRG FG+ +C + K + +++ ++ +R+ E++ + ++ NIV+
Sbjct: 17 VGRGAFGV--VCKAK-----WRAKDVAIKQIESESERKAFIVELRQLSRVN-HPNIVKLY 68
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQ---GHYTEKAAAALCRAIVNVVHHCHFM---G 215
GA + V LVME GG L++ + +YT A + C V + H M
Sbjct: 69 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YG 274
++HRDLKP N LL GG +LK DFG + I GSA ++APEV S Y
Sbjct: 127 LIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISDSAKDLVR 332
++ DV+S G+IL+ +++ PF E G + V + P L+ + + L+
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 239
Query: 333 KMLIQDPKKRITSAEVLE 350
+ +DP +R + E+++
Sbjct: 240 RCWSKDPSQRPSMEEIVK 257
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 39/205 (19%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWMREGGEASDKPIG-SAVLS 371
+EHP+ + +P +AVLS
Sbjct: 318 AMEHPYFYPVVKEQSQPCADNAVLS 342
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+GRG FG+ +C + K + +++ ++ +R+ E++ + ++ NIV+
Sbjct: 16 VGRGAFGV--VCKAK-----WRAKDVAIKQIESESERKAFIVELRQLSRVN-HPNIVKLY 67
Query: 162 GAYEDRQSVHLVMELCSGGELFDKIIAQ---GHYTEKAAAALCRAIVNVVHHCHFM---G 215
GA + V LVME GG L++ + +YT A + C V + H M
Sbjct: 68 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YG 274
++HRDLKP N LL GG +LK DFG + I GSA ++APEV S Y
Sbjct: 126 LIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYS 181
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLL--ISDSAKDLVR 332
++ DV+S G+IL+ +++ PF E G + V + P L+ + + L+
Sbjct: 182 EKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 238
Query: 333 KMLIQDPKKRITSAEVLE 350
+ +DP +R + E+++
Sbjct: 239 RCWSKDPSQRPSMEEIVK 256
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 31/272 (11%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHY 180
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEK----GIFDAILKGGVDFESEPWL---LI 323
+ D+WS G+ L + G +PP A+ + IF+ L + E P L +
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE--LLDYIVNEPPPKLPSGVF 238
Query: 324 SDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
S +D V K LI++P +R +++ H +++
Sbjct: 239 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 454 DYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS 508
D+ EF+ + + + + +E L F+ FDK+ G+I +EL ++ G E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMR 534
I++++ + D +NDGRI+++EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
AF FD D G I+ EL T M+ G + + II EVD D G I++EEF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 536 GTPQPAK 542
+ AK
Sbjct: 85 QMKEDAK 91
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K A+ SEEE L F D + G I EEL L G ++E +++ LM +D
Sbjct: 86 MKEDAKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 447 VDGNGTIDYIEFI 459
+ +G ID+ EF+
Sbjct: 143 KNNDGRIDFDEFL 155
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 454 DYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEA 507
D+ EF+ + + + + +E L + F+ FD++ GYI +EL + G + DE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDE- 129
Query: 508 SIKEIISEVDTDNDGRINYEEFCTMM 533
I+ ++ + D +NDGRI+++EF MM
Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 477 AFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
AF FD D G I+ EL T M+ G + + II EVD D G I++EEF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 536 GTPQPAK 542
+ AK
Sbjct: 82 QMKEDAK 88
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K A+ SEEE L +F D + G I EEL G +++ E++ LM D
Sbjct: 83 MKEDAKGKSEEE---LAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGD 139
Query: 447 VDGNGTIDYIEFI 459
+ +G ID+ EF+
Sbjct: 140 KNNDGRIDFDEFL 152
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 35/240 (14%)
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA------- 196
EI+++ N++ + + + +++ +ELC+ L D + ++ E
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYN 134
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN--------KDGGAMLK--ATDFGLSV 246
+L R I + V H H + ++HRDLKP+N L+S + G L+ +DFGL
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 247 FIDEGKV-----YRDIVGSAYYVAPEVL----RRSYGKEIDVWSAGVILYILLS-GVPPF 296
+D G+ + G++ + APE+L +R + ID++S G + Y +LS G PF
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 297 WAETEKGIFDAILKGGVDFESEPWL----LISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
+ + I++G + L LI++ A DL+ +M+ DP KR T+ +VL HP
Sbjct: 255 GDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAE-ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 454 DYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS 508
D+ EF+ + + + + +E L F+ FDK+ G+I +EL ++ G E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 509 IKEIISEVDTDNDGRINYEEFCTMM 533
I++++ + D +NDGRI+++EF MM
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
AF FD D G I+ EL T M+ G + + II EVD D G I++EEF MM
Sbjct: 22 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 536 GTPQPAK 542
+ AK
Sbjct: 82 QMKEDAK 88
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K A+ SEEE L F D + G I EEL L G ++E +++ LM +D
Sbjct: 83 MKEDAKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 139
Query: 447 VDGNGTIDYIEFI 459
+ +G ID+ EF+
Sbjct: 140 KNNDGRIDFDEFL 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 129/300 (43%), Gaps = 39/300 (13%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
PL + F + K +G G +G+ Y TG A K I I REI +
Sbjct: 1 PLGSMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISL 58
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIV 205
++ L+ NIV+ ++LV E S + D G + L + ++
Sbjct: 59 LKELN-HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ-LL 116
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYV 264
+ CH V+HRDLKPEN LL N +G +K DFGL+ F + Y V + +Y
Sbjct: 117 QGLAFCHSHRVLHRDLKPEN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGG 312
APE+L + Y +D+WS G I +++ F ++E G D ++ G
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 313 V----------------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
V DF S+ + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 234 VTSMPDYKPSFPKWARQDF-SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 35/240 (14%)
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA------- 196
EI+++ N++ + + + +++ +ELC+ L D + ++ E
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYN 134
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN--------KDGGAMLK--ATDFGLSV 246
+L R I + V H H + ++HRDLKP+N L+S + G L+ +DFGL
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 247 FIDEGKV-----YRDIVGSAYYVAPEVL----RRSYGKEIDVWSAGVILYILLS-GVPPF 296
+D G+ + G++ + APE+L +R + ID++S G + Y +LS G PF
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 297 WAETEKGIFDAILKGGVDFESEPWL----LISDSAKDLVRKMLIQDPKKRITSAEVLEHP 352
+ + I++G + L LI++ A DL+ +M+ DP KR T+ +VL HP
Sbjct: 255 GDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAE-ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 454 DYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG---IGDE 506
D+ EF+ + + + + +E L F+ FDK+ G+I +EL ++ G I E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI--E 131
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMR 534
I++++ + D +NDGRI+++EF MM
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
AF FD D G I+ EL T M+ G + + II EVD D G I++EEF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 536 GTPQPAK 542
+ AK
Sbjct: 85 QMKEDAK 91
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K A+ SEEE L F D + G I EEL L G + E +++ LM +D
Sbjct: 86 MKEDAKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSD 142
Query: 447 VDGNGTIDYIEFI 459
+ +G ID+ EF+
Sbjct: 143 KNNDGRIDFDEFL 155
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 454 DYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS 508
D+ EF+ + + + + +E L F+ FDK+ G+I +EL ++ G E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMR 534
I++++ + D +NDGRI+++EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
AF FD D G I+ EL T M+ G + + II EVD D G I++EEF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 536 GTPQPAK 542
+ AK
Sbjct: 85 QMKEDAK 91
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K A+ SEEE L F D + G I EEL L G ++E +++ LM +D
Sbjct: 86 MKEDAKGKSEEE---LADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 447 VDGNGTIDYIEFI 459
+ +G ID+ EF+
Sbjct: 143 KNNDGRIDFDEFL 155
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 133/316 (42%), Gaps = 43/316 (13%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
PL D+ F + K +G G +G+ Y TG A K I I REI +
Sbjct: 2 PLVDMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISL 59
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIV 205
++ L+ NIV+ ++LV E + D G + L + +
Sbjct: 60 LKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYV 264
+ CH V+HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y
Sbjct: 119 GLAF-CHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYR 174
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGG 312
APE+L + Y +D+WS G I +++ F ++E G D ++ G
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 313 V----------------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
V DF S+ + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 235 VTSMPDYKPSFPKWARQDF-SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Query: 357 GGEASDKPIGSAVLSR 372
KP+ L R
Sbjct: 294 ----VTKPVPHLRLER 305
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK FGL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILGFGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 56 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 114 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ + MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 173 QHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 289 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 23/265 (8%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 32 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 84
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 144
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 145 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHY 199
Query: 274 GKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWL---LISDSAKDL 330
+ D+WS G+ L + G P + + +L V+ E P L + S +D
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN-EPPPKLPSGVFSLEFQDF 258
Query: 331 VRKMLIQDPKKRITSAEVLEHPWMR 355
V K LI++P +R +++ H +++
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
LSEE I K F D D G I+ +EL T + LG ++ E+ +++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 454 DYIEFISATMHRYRLE----RDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEAS 508
D+ EF+ + + + + +E L F+ FDK+ G+I +EL ++ G E
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 509 IKEIISEVDTDNDGRINYEEFCTMMR 534
I++++ + D +NDGRI+++EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 477 AFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMMRS 535
AF FD D G I+ EL T M+ G + + II EVD D G I++EEF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 536 GTPQPAK 542
+ AK
Sbjct: 85 QMKEDAK 91
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 387 LKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
+K A+ SEEE L+ F D + G I EEL L G ++E +++ LM +D
Sbjct: 86 MKEDAKGKSEEE---LEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 447 VDGNGTIDYIEFI 459
+ +G ID+ EF+
Sbjct: 143 KNNDGRIDFDEFL 155
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ L LG+G + TG+ +A K + D + RE ++++ L+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN- 65
Query: 154 QQNIVEFRGAYEDRQSVH--LVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVNVV 208
+NIV+ E+ + H L+ME C G L+ + + E + R +V +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 209 HHCHFMGVMHRDLKPENFL-LSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+H G++HR++KP N + + +DG ++ K TDFG + +++ + + + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 268 VLRRS---------YGKEIDVWSAGVILYILLSGVPPF 296
+ R+ YG +D+WS GV Y +G PF
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ L LG+G + TG+ +A K + D + RE ++++ L+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN- 65
Query: 154 QQNIVEFRGAYEDRQSVH--LVMELCSGGELFDKIIAQGH---YTEKAAAALCRAIVNVV 208
+NIV+ E+ + H L+ME C G L+ + + E + R +V +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 209 HHCHFMGVMHRDLKPENFL-LSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+H G++HR++KP N + + +DG ++ K TDFG + +++ + + + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 268 VLRRS---------YGKEIDVWSAGVILYILLSGVPPF 296
+ R+ YG +D+WS GV Y +G PF
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 56 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 114 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ + MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 173 QHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 289 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK D GL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDAGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 56 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 114 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ + MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 173 QHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 289 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 129/300 (43%), Gaps = 39/300 (13%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
PL + F + K +G G +G+ Y TG A K I I REI +
Sbjct: 1 PLGSMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISL 58
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIV 205
++ L+ NIV+ ++LV E S + D G + L + ++
Sbjct: 59 LKELN-HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ-LL 116
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYV 264
+ CH V+HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y
Sbjct: 117 QGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGG 312
APE+L + Y +D+WS G I +++ F ++E G D ++ G
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 313 V----------------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
V DF S+ + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 234 VTSMPDYKPSFPKWARQDF-SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK D GL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDRGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 12 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 69
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 70 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 128
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ DG MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 129 QHGIVHSDLKPANFLIV--DG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 244
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 245 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 67
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E S + D G + L + ++ + CH V+
Sbjct: 68 LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVL 126
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKPEN LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 127 HRDLKPEN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 28 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 85
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 86 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ + MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 145 QHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 261 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N L+ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVLIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
L K + ++ + Y +G G +G + TG A K L R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK-LSRPFQSIIHAKRTYRE 71
Query: 145 IQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA 198
+++++H+ +N++ + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV 258
L I+ + + H ++HRDLKP N L N+D LK D GL+ D+ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN-LAVNED--CELKILDGGLARHTDDEMT--GYV 183
Query: 259 GSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GG 312
+ +Y APE++ Y + +D+WS G I+ LL+G F IL+ G
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 313 VDFESEPWLLISDSAK--------------------------DLVRKMLIQDPKKRITSA 346
+ + + S+SA+ DL+ KML+ D KRIT+A
Sbjct: 244 AELLKK---ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 347 EVLEHPWMREGGEASDKPIG 366
+ L H + + + D+P+
Sbjct: 301 QALAHAYFAQYHDPDDEPVA 320
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 9 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 66
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 67 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ DG MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 126 QHGIVHSDLKPANFLIV--DG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 242 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 44/297 (14%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR---EDIKREIQIMQH 150
Q Y +++G G +G + T A LKR ++ D REI +++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVA----LKRVRLDDDDEGVPSSALREICLLKE 57
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVV 208
L +NIV + + LV E C + FD G + + ++ +
Sbjct: 58 LK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGL 114
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPE 267
CH V+HRDLKP+N LL N++G LK +FGL+ F + Y V + +Y P+
Sbjct: 115 GFCHSRNVLHRDLKPQN-LLINRNGE--LKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 268 VL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE-----KGIFDAI----------LK 310
VL + Y ID+WSAG I L + P + + K IF + +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 311 GGVDFESEPWLLISDS-----------AKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
D++ P + S +DL++ +L +P +RI++ E L+HP+ +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 28 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 85
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 86 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ + MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 145 QHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI 200
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 261 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 30/281 (10%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+ Y++ K++G G + N YA K + + + Q + + EI + L
Sbjct: 8 RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV-NLEEADNQTLDSYRNEIAYLNKLQQ 65
Query: 154 QQNIVEFRGAYE-DRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH 212
+ + YE Q +++VME C +L + + + + ++ VH H
Sbjct: 66 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 124
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDI-VGSAYYVAPEVL 269
G++H DLKP NFL+ + MLK DFG++ + D V +D VG+ Y+ PE +
Sbjct: 125 QHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
Query: 270 R-----RSYG-------KEIDVWSAGVILYILLSGVPPFWAETEK-GIFDAILKGG--VD 314
+ R G + DVWS G ILY + G PF + AI+ ++
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 240
Query: 315 FESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
F P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 241 FPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 101 ELGRGQFGITYLCTENSTG-NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+LG+G FG LC + G N+ A ++ + + + D +REIQI++ L IV+
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 75
Query: 160 FRGAY--EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG-- 215
+RG RQS+ LVME G L D + Q H A+ L + ++G
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 216 -VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----VGSAYYVAPEVLR 270
+HRDL N L+ ++ A +K DFGL+ + K Y + ++ APE L
Sbjct: 134 RCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 271 RS-YGKEIDVWSAGVILYILLS 291
+ + ++ DVWS GV+LY L +
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 317 AMEHPYF 323
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 19/265 (7%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
ELGRG +G+ +G A K I R VN Q+++ + ++ I V F
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 161 RGAYEDRQSVHLVMEL--CSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHF-MGV 216
GA V + MEL S + + ++I +G E + +IV + H H + V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL-----RR 271
+HRD+KP N L+ + +K DFG+S ++ + G Y+APE + ++
Sbjct: 176 IHRDVKPSNVLI---NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 272 SYGKEIDVWSAGVILYILLSGVPPF--WAETEKGIFDAILKGGVDFESEPWLLISDSAKD 329
Y + D+WS G+ + L P+ W + + + + ++ + S D
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFVD 289
Query: 330 LVRKMLIQDPKKRITSAEVLEHPWM 354
+ L ++ K+R T E+++HP+
Sbjct: 290 FTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 202
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 203 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 262
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 263 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 322
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 323 AMEHPYF 329
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 318 AMEHPYF 324
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 101 ELGRGQFGITYLCTENSTG-NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+LG+G FG LC + G N+ A ++ + + + D +REIQI++ L IV+
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 76
Query: 160 FRGAY--EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG-- 215
+RG RQS+ LVME G L D + Q H A+ L + ++G
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSR 134
Query: 216 -VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----VGSAYYVAPEVLR 270
+HRDL N L+ ++ A +K DFGL+ + K Y + ++ APE L
Sbjct: 135 RCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 271 RS-YGKEIDVWSAGVILYILLS 291
+ + ++ DVWS GV+LY L +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 317 AMEHPYF 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
I+ + +CH MG+MHRD+KP N ++ ++ L+ D+GL+ F G+ Y V S Y+
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++D
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
I K ++ + SE L+S A D + K+L D + R+T+ E
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 316 AMEHPYF 322
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 125/317 (39%), Gaps = 77/317 (24%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-----IKREIQIM 148
QF L K LG G + Y +TG A K + K D E+ REI +M
Sbjct: 6 QFKQLEK-LGNGTYATVYKGLNKTTGVYVALKEV-------KLDSEEGTPSTAIREISLM 57
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI-VNV 207
+ L +NIV + LV E + + + R + +N+
Sbjct: 58 KELK-HENIVRLYDVIHTENKLTLVFEFMDND-------LKKYMDSRTVGNTPRGLELNL 109
Query: 208 VHH-----------CHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYR 255
V + CH ++HRDLKP+N L+ NK G LK DFGL+ F +
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLI-NKRG--QLKLGDFGLARAFGIPVNTFS 166
Query: 256 DIVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWA----ETEKGIFDAIL 309
V + +Y AP+VL R+Y ID+WS G IL +++G P F E K IFD +
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIM- 225
Query: 310 KGGVDFESEPWLLISDSAK------------------------------DLVRKMLIQDP 339
G ES W ++ K D + +L +P
Sbjct: 226 --GTPNESL-WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNP 282
Query: 340 KKRITSAEVLEHPWMRE 356
R+++ + L HPW E
Sbjct: 283 DMRLSAKQALHHPWFAE 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA------- 196
EI+++ N++ + + + +++ +ELC+ L D + ++ E
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYN 116
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN--------KDGGAMLK--ATDFGLSV 246
+L R I + V H H + ++HRDLKP+N L+S + G L+ +DFGL
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 247 FIDEGKV-----YRDIVGSAYYVAPEVL--------RRSYGKEIDVWSAGVILYILLS-G 292
+D G+ + G++ + APE+L +R + ID++S G + Y +LS G
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 293 VPPFWAETEKGIFDAILKGGVDFESEPWL----LISDSAKDLVRKMLIQDPKKRITSAEV 348
PF + + I++G + L LI++ A DL+ +M+ DP KR T+ +V
Sbjct: 237 KHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAE-ATDLISQMIDHDPLKRPTAMKV 293
Query: 349 LEHP 352
L HP
Sbjct: 294 LRHP 297
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 68
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E S + D G + L + ++ + CH V+
Sbjct: 69 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVL 127
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 128 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 144 EIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA------- 196
EI+++ N++ + + + +++ +ELC+ L D + ++ E
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENLKLQKEYN 116
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN--------KDGGAMLK--ATDFGLSV 246
+L R I + V H H + ++HRDLKP+N L+S + G L+ +DFGL
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 247 FIDEGKV-----YRDIVGSAYYVAPEVL--------RRSYGKEIDVWSAGVILYILLS-G 292
+D G+ + G++ + APE+L +R + ID++S G + Y +LS G
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 293 VPPFWAETEKGIFDAILKGGVDFESEPWL----LISDSAKDLVRKMLIQDPKKRITSAEV 348
PF + + I++G + L LI++ A DL+ +M+ DP KR T+ +V
Sbjct: 237 KHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAE-ATDLISQMIDHDPLKRPTAMKV 293
Query: 349 LEHP 352
L HP
Sbjct: 294 LRHP 297
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 101 ELGRGQFGITYLCTENSTG-NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+LG+G FG LC + G N+ A ++ + + + D +REIQI++ L IV+
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 88
Query: 160 FRGAY--EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG-- 215
+RG RQS+ LVME G L D + Q H A+ L + ++G
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 216 -VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----VGSAYYVAPEVLR 270
+HRDL N L+ ++ A +K DFGL+ + K Y + ++ APE L
Sbjct: 147 RCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 271 RS-YGKEIDVWSAGVILYILLS 291
+ + ++ DVWS GV+LY L +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 44/293 (15%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG--QQNIVE 159
LGRG FG + + TG A K + R ++ R ++M +G IV
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMA-CAGLTSPRIVP 130
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
GA + V++ MEL GG L + QG E A + + + H ++H
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV------GSAYYVAPE-VLRRS 272
D+K +N LLS+ A L DFG +V + + +D++ G+ ++APE VL RS
Sbjct: 191 DVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL-- 330
++DVWS+ ++ +L+G P W + F L + E P I S L
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAPLTA 303
Query: 331 --VRKMLIQDPKKRITSAEV-------------LEHPWMREGGEASDKPIGSA 368
+++ L ++P R+++AE+ L+ PW E E P A
Sbjct: 304 QAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHPPPNQA 356
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 21/266 (7%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
ELGRG +G+ +G A K I R VN Q+++ + ++ I V F
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 161 RGAYEDRQSVHLVMEL--CSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHF-MGV 216
GA V + MEL S + + ++I +G E + +IV + H H + V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI-VGSAYYVAPEVL-----R 270
+HRD+KP N L+ + +K DFG+S ++ + V +DI G Y+APE + +
Sbjct: 132 IHRDVKPSNVLI---NALGQVKMCDFGISGYLVD-DVAKDIDAGCKPYMAPERINPELNQ 187
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPF--WAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
+ Y + D+WS G+ + L P+ W + + + + ++ + S
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFV 244
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWM 354
D + L ++ K+R T E+++HP+
Sbjct: 245 DFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKPEN LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPEN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 68
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 127
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKPEN LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 128 HRDLKPEN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 40/231 (17%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQ-DREDIKREIQIMQHLSGQQNIVEF 160
LGRG FG+ + +YA K I +L N++ RE + RE++ + L IV +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLE-HPGIVRY 68
Query: 161 RGAYEDRQS------------VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVV 208
A+ ++ + +++ M+LC L D + + E+ + + +
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 209 HHCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI-------- 257
F+ G+MHRDLKP N + D ++K DFGL +D+ + + +
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 258 -----VGSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302
VG+ Y++PE + SY ++D++S G+IL+ LL PF + E+
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER 233
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 129/329 (39%), Gaps = 82/329 (24%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR--EDIKREIQIMQHLSG 153
Y + LG G FG C ++ G + + K+V DR E + EIQ+++HL+
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRH-----VAVKIVKNVDRYCEAARSEIQVLEHLNT 70
Query: 154 QQNIVEFRGA-----YEDRQSVHLVMELCSGGELFDKIIAQGH------YTEKAAAALCR 202
FR +E + +V EL G +D I G + K A +C+
Sbjct: 71 TDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM----------------LKATDFGLSV 246
+ VN +H + H DLKPEN L D +K DFG +
Sbjct: 130 S-VNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 247 FIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVIL---YILLSGVPPFWAETEK 302
+ DE + +V + +Y APEV L + + DVWS G IL Y+ + P ++
Sbjct: 186 YDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 303 GIFDAIL--------------------KGGVDFESEPWLLISDSAK-------------- 328
+ + IL + D S +S + K
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 329 ---DLVRKMLIQDPKKRITSAEVLEHPWM 354
DL++KML DP KRIT E L+HP+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 129/299 (43%), Gaps = 37/299 (12%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
PL + F + K +G G +G+ Y TG A K I I REI +
Sbjct: 1 PLGSMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISL 58
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIV 205
++ L+ NIV+ ++LV E + D G + L + +
Sbjct: 59 LKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYV 264
+ CH V+HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y
Sbjct: 118 GLAF-CHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGG 312
APE+L + Y +D+WS G I +++ F ++E G D ++ G
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 313 V----DFE-SEP-WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
V D++ S P W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 67
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 126
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKPEN LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 127 HRDLKPEN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 129/299 (43%), Gaps = 37/299 (12%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
PL + F + K +G G +G+ Y TG A K I I REI +
Sbjct: 2 PLGSMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISL 59
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIV 205
++ L+ NIV+ ++LV E + D G + L + +
Sbjct: 60 LKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYV 264
+ CH V+HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y
Sbjct: 119 GLAF-CHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYR 174
Query: 265 APEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGG 312
APE+L + Y +D+WS G I +++ F ++E G D ++ G
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 313 V----DFE-SEP-WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
V D++ S P W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 40/303 (13%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
LG P E + F + K +G G +G+ Y TG A K I I RE
Sbjct: 3 LGSP-EFMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-RE 59
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCR 202
I +++ L+ NIV+ ++LV E + D G + L +
Sbjct: 60 ISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSA 261
+ + CH V+HRDLKP+N LL N +G +K DFGL+ F + Y V +
Sbjct: 119 LLQGLAF-CHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 262 YYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAIL 309
+Y APE+L + Y +D+WS G I +++ F ++E G D ++
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 310 KGGV----------------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
GV DF S+ + + + L+ +ML DP KRI++ L HP+
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDF-SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 354 MRE 356
++
Sbjct: 294 FQD 296
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
+ +EIK L F +D D SG+++ EE + L V++++D D DGNG +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEV 56
Query: 454 DYIEFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD---EASI 509
D+ EFI + + ++++ L AF+ +D D GYI+ EL +K +G+ + +
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK-MMVGNNLKDTQL 115
Query: 510 KEIISEV----DTDNDGRINYEEFCTMM 533
++I+ + D D DGRI++EEFC ++
Sbjct: 116 QQIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
+EIK L F +D D SG+++ EE + L V++++D D DGNG +D+
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDFK 72
Query: 457 EFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD---EASIKEI 512
EFI + + ++++ L AF+ +D D GYI+ EL +K +G+ + +++I
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK-MMVGNNLKDTQLQQI 131
Query: 513 ISEV----DTDNDGRINYEEFCTMM 533
+ + D D DGRI++EEFC ++
Sbjct: 132 VDKTIINADKDGDGRISFEEFCAVV 156
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 123/289 (42%), Gaps = 42/289 (14%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSG--QQN 156
E+G G +G Y + +G+ A KS+ ++ N ++ I RE+ +++ L N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 157 IVEFRG----AYEDRQ-SVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+V + DR+ V LV E DK G E L R + +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLD 126
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H ++HRDLKPEN L+++ G +K DFGL+ +V + +Y APEVL
Sbjct: 127 FLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI-------------LKG 311
+S Y +D+WS G I + P F +E IFD I L
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 312 GVDFESEPWLLIS------DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G P + S +S L+ +ML +P KRI++ L+H ++
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
++VME G L D + +G T K A + ++ H G++HRD+KP N L+S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 231 KDGGAMLKATDFGLSVFI-DEGKVYRD---IVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285
+ +K DFG++ I D G ++G+A Y++PE R S DV+S G +
Sbjct: 152 TNA---VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
LY +L+G PPF ++ + ++ S +S +V K L ++P+ R +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 268
Query: 346 AEVLEHPWMR-EGGEASDKP 364
A + +R GE + P
Sbjct: 269 AAEMRADLVRVHNGEPPEAP 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 40/303 (13%)
Query: 85 LGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKRE 144
LG P E + F + K +G G +G+ Y TG A K I I RE
Sbjct: 3 LGSP-EFMENFQKVEK-IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-RE 59
Query: 145 IQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCR 202
I +++ L+ NIV+ ++LV E + D G + L +
Sbjct: 60 ISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSA 261
+ + CH V+HRDLKP+N LL N +G +K DFGL+ F + Y V +
Sbjct: 119 LLQGLAF-CHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 262 YYVAPEVLR--RSYGKEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAIL 309
+Y APE+L + Y +D+WS G I +++ F ++E G D ++
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 310 KGGV----------------DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
GV DF S+ + + + L+ +ML DP KRI++ L HP+
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDF-SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 354 MRE 356
++
Sbjct: 294 FQD 296
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
+EIK L F +D D SG+++ EE + L V++++D D DGNG +D+
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 457 EFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD---EASIKEI 512
EFI + + ++++ L AF+ +D D GYI+ EL +K +G+ + +++I
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK-MMVGNNLKDTQLQQI 117
Query: 513 ISEV----DTDNDGRINYEEFCTMM 533
+ + D D DGRI++EEFC ++
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVV 142
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 123/289 (42%), Gaps = 42/289 (14%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSG--QQN 156
E+G G +G Y + +G+ A KS+ ++ N ++ I RE+ +++ L N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 157 IVEFRG----AYEDRQ-SVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+V + DR+ V LV E DK G E L R + +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLD 126
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H ++HRDLKPEN L+++ G +K DFGL+ +V + +Y APEVL
Sbjct: 127 FLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI-------------LKG 311
+S Y +D+WS G I + P F +E IFD I L
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 312 GVDFESEPWLLIS------DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G P + S +S L+ +ML +P KRI++ L+H ++
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVL--RRSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 123/289 (42%), Gaps = 42/289 (14%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSG--QQN 156
E+G G +G Y + +G+ A KS+ ++ N ++ I RE+ +++ L N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 157 IVEFR----GAYEDRQ-SVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+V + DR+ V LV E DK G E L R + +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLD 126
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H ++HRDLKPEN L+++ G +K DFGL+ +V + +Y APEVL
Sbjct: 127 FLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI-------------LKG 311
+S Y +D+WS G I + P F +E IFD I L
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 312 GVDFESEPWLLIS------DSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
G P + S +S L+ +ML +P KRI++ L+H ++
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 68
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 127
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 128 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 69
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 128
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 129 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 68
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 127
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 128 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
++VME G L D + +G T K A + ++ H G++HRD+KP N ++S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 231 KDGGAMLKATDFGLSVFI-DEGKVYRD---IVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285
+ +K DFG++ I D G ++G+A Y++PE R S DV+S G +
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
LY +L+G PPF ++ + ++ S +S +V K L ++P+ R +
Sbjct: 209 LYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 268
Query: 346 AEVLEHPWMR-EGGEASDKP 364
A + +R GE + P
Sbjct: 269 AAEMRADLVRVHNGEPPEAP 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 69
Query: 160 FRGAYEDRQSVHLVME-LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
++LV E L + F A + ++ + CH V+H
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYGK 275
RDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 130 RDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 276 EIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP- 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 246
Query: 320 WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 247 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 67
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 126
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 127 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 67
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 126
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 127 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 67
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 126
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 127 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 128/329 (38%), Gaps = 82/329 (24%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDR--EDIKREIQIMQHLSG 153
Y + LG G FG C ++ G + + K+V DR E + EIQ+++HL+
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRH-----VAVKIVKNVDRYCEAARSEIQVLEHLNT 70
Query: 154 QQNIVEFRGA-----YEDRQSVHLVMELCSGGELFDKIIAQGH------YTEKAAAALCR 202
FR +E + +V EL G +D I G + K A +C+
Sbjct: 71 TDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM----------------LKATDFGLSV 246
+ VN +H + H DLKPEN L D +K DFG +
Sbjct: 130 S-VNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 247 FIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVIL---YILLSGVPPFWAETEK 302
+ DE + +V +Y APEV L + + DVWS G IL Y+ + P ++
Sbjct: 186 YDDEH--HSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 303 GIFDAIL--------------------KGGVDFESEPWLLISDSAK-------------- 328
+ + IL + D S +S + K
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 329 ---DLVRKMLIQDPKKRITSAEVLEHPWM 354
DL++KML DP KRIT E L+HP+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + ++ + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLSFCHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 36/264 (13%)
Query: 65 QQPM--KSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY---LCTENSTG 119
QQP+ KS R V K + VL ED+ LG+++GRG FG + L +N+
Sbjct: 89 QQPLTKKSGVVLHRAVPKDKWVLNH--EDL----VLGEQIGRGNFGEVFSGRLRADNTLV 142
Query: 120 NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179
+C+ L L K +E +I++ S NIV G +Q +++VMEL G
Sbjct: 143 AVKSCRETLPPDLKAK-----FLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM---GVMHRDLKPENFLLSNKDGGAM 236
G+ + +G L + + + ++ +HRDL N L++ K+ +
Sbjct: 197 GDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN---V 251
Query: 237 LKATDFGLS------VFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYIL 289
LK +DFG+S V+ G + + V + APE L Y E DVWS G++L+
Sbjct: 252 LKISDFGMSREEADGVYAASGGLRQVPVK---WTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 290 LS-GVPPFWAETEKGIFDAILKGG 312
S G P+ + + + + KGG
Sbjct: 309 FSLGASPYPNLSNQQTREFVEKGG 332
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 124
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 125 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 124
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 125 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 124
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 125 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + ++ + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 124
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 125 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
++VME G L D + +G T K A + ++ H G++HRD+KP N ++S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 231 KDGGAMLKATDFGLSVFI-DEGKVYRD---IVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285
+ +K DFG++ I D G ++G+A Y++PE R S DV+S G +
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
LY +L+G PPF ++ + ++ S +S +V K L ++P+ R +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 268
Query: 346 AEVLEHPWMR-EGGEASDKP 364
A + +R GE + P
Sbjct: 269 AAEMRADLVRVHNGEPPEAP 288
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
++VME G L D + +G T K A + ++ H G++HRD+KP N ++S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 231 KDGGAMLKATDFGLSVFI-DEGKVYRD---IVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285
+ +K DFG++ I D G ++G+A Y++PE R S DV+S G +
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
LY +L+G PPF ++ + ++ S +S +V K L ++P+ R +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 268
Query: 346 AEVLEHPWMR-EGGEASDKP 364
A + +R GE + P
Sbjct: 269 AAEMRADLVRVHNGEPPEAP 288
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
++VME G L D + +G T K A + ++ H G++HRD+KP N ++S
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 231 KDGGAMLKATDFGLSVFI-DEGKVYRD---IVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285
+ +K DFG++ I D G ++G+A Y++PE R S DV+S G +
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 286 LYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
LY +L+G PPF ++ + ++ S +S +V K L ++P+ R +
Sbjct: 209 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 268
Query: 346 AEVLEHPWMR-EGGEASDKP 364
A + +R GE + P
Sbjct: 269 AAEMRADLVRVHNGEPPEAP 288
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 156
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 157 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 215 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLN 274
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 275 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 335 THPYFQQ 341
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 31/260 (11%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG--QQNIVE 159
LGRG FG + + TG A K + R ++ R ++M +G IV
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMA-CAGLTSPRIVP 149
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
GA + V++ MEL GG L + QG E A + + + H ++H
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV------GSAYYVAPE-VLRRS 272
D+K +N LLS+ A L DFG +V + + + ++ G+ ++APE VL RS
Sbjct: 210 DVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDL-- 330
++DVWS+ ++ +L+G P W + F L + E P I S L
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAPLTA 322
Query: 331 --VRKMLIQDPKKRITSAEV 348
+++ L ++P R+++AE+
Sbjct: 323 QAIQEGLRKEPIHRVSAAEL 342
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 43/253 (16%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 136
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 350 EHPWMREGGEASD 362
HP+ ++ A +
Sbjct: 315 THPYFQQVRAAEN 327
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 136
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 315 THPYFQQ 321
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 69
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + + + CH V+
Sbjct: 70 LLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF-CHSHRVL 128
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 129 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----------- 313
+D+WS G I +++ F ++E G D ++ GV
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 314 -----DFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
DF S+ + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 246 KWARQDF-SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 137
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 196 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 255
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 316 THPYFQQ 322
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK--REIQIMQHLSG--QQN 156
E+G G +G Y + +G+ A KS+ I RE+ +++ L N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 157 IVEFR----GAYEDRQ-SVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+V + DR+ V LV E DK G E L R + +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLD 134
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
H ++HRDLKPEN L+++ G +K DFGL+ +V + +Y APEVL
Sbjct: 135 FLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVL 191
Query: 270 RRS-YGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI-------------LKG 311
+S Y +D+WS G I + P F +E IFD I L
Sbjct: 192 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 251
Query: 312 GVDFESEPWLLIS------DSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
G P + S +S L+ +ML +P KRI++ L+H ++ +
Sbjct: 252 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 135
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 135
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 59/302 (19%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 75 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 127
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 188 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHY 242
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEKGIFDAILKG------------------- 311
+ D+WS G+ L + G +PP A+ + +F ++G
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 302
Query: 312 GVD-------FE-----------SEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPW 353
G+D FE P + S +D V K LI++P +R +++ H +
Sbjct: 303 GMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 362
Query: 354 MR 355
++
Sbjct: 363 IK 364
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 135
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 135
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 135
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Query: 395 SEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTID 454
+EE+ + ++ F D D +GTI +ELK + LG + + E+K+++ D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 455 YIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIK 510
+ +F++ + E+D E + KAF+ FD D +G I+ L+ K+ G + DE ++
Sbjct: 61 FGDFLTVMTQKMS-EKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDE-ELQ 118
Query: 511 EIISEVDTDNDGRINYEEFCTMMR 534
E+I E D D DG ++ +EF +M+
Sbjct: 119 EMIDEADRDGDGEVSEQEFLRIMK 142
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A K I I REI +++ L+ NIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 65
Query: 160 FRGAYEDRQSVHLVME-LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
++LV E + + F A + ++ + CH V+H
Sbjct: 66 LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYGK 275
RDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 RDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 276 EIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP- 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
Query: 320 WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 72.0 bits (175), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K FA D D +G+I+ EL T + LG SE EV LM+ DVDGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG 502
++ EF+ A M R D + L +AF+ FDK+ G I+ EL+ + G
Sbjct: 64 EFSEFL-ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E+ +AF FDKDN+G I+ EL T M+ G+ EA + ++++E+D D + +I +
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 528 EFCTMM 533
EF +M
Sbjct: 67 EFLALM 72
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
+EIK L F +D D SG+++ EE + L V++++D D DGNG +D+
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDFK 73
Query: 457 EFISA-TMHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGD---EASIKEI 512
EFI + + ++++ L AF+ +D D GYI+ EL +K +G+ + +++I
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK-MMVGNNLKDTQLQQI 132
Query: 513 ISEV----DTDNDGRINYEEFCTMM 533
+ + D D DGRI++EEFC ++
Sbjct: 133 VDKTIINADKDGDGRISFEEFCAVV 157
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 148 MQHLSGQQNIVEFRGAYEDRQS--VHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIV 205
+Q+L G NIV+ D+ S L+ E + + K++ T+ ++
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELL 135
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVA 265
+ +CH G+MHRD+KP N ++ ++ L+ D+GL+ F GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 266 PEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 309
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 310 KGGVDFESE-----------PWL---------LISDSAKDLVRKMLIQDPKKRITSAEVL 349
K ++ + + PWL L+S A D + K+L D ++R+T+ E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 350 EHPWMRE 356
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 39/205 (19%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
++ + +CH G+MHRD+KP N ++ ++ L+ D+GL+ F + Y V S Y+
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 258
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
+ K +D + SE L+S A DL+ K+L D ++R+T+ E
Sbjct: 259 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 318
Query: 348 VLEHPWMREGGEASDKPIG-SAVLS 371
+EHP+ + +P +AVLS
Sbjct: 319 AMEHPYFYPVVKEQSQPSADNAVLS 343
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 45/311 (14%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIK-REIQIMQHLSGQQNIVE 159
+LG G + Y T N A K I +L +++ RE+ +++ L NIV
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK-HANIVT 64
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKI--IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
+S+ LV E + D I H + L R + +CH
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA----YCHRQK 120
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID-EGKVYRDIVGSAYYVAPEVLRRS-- 272
V+HRDLKP+N L++ + LK DFGL+ K Y + V + +Y P++L S
Sbjct: 121 VLHRDLKPQNLLINER---GELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK--GGVDFESEPWLLISDSAK-- 328
Y +ID+W G I Y + +G P F T + I + G E+ P +L ++ K
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237
Query: 329 ----------------------DLVRKMLIQDPKKRITSAEVLEHPWMREGGEASDKPIG 366
DL+ K+L + + RI++ + ++HP+ GE K
Sbjct: 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPD 297
Query: 367 SAVLSRMKQFR 377
+ + +K+ +
Sbjct: 298 TTSIFALKEIQ 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 127/301 (42%), Gaps = 47/301 (15%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-----IKREIQIM 148
Q Y E+G G +G + + G + LKR V Q E+ RE+ ++
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA---LKR--VRVQTGEEGMPLSTIREVAVL 65
Query: 149 QHLSG--QQNIVEFRG----AYEDRQS-VHLVMELCSGG--ELFDKIIAQGHYTEKAAAA 199
+HL N+V + DR++ + LV E DK+ G TE
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259
+ + ++ + H V+HRDLKP+N L+++ +K DFGL+ +V
Sbjct: 126 MFQ-LLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVV 181
Query: 260 SAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI-LKGGV 313
+ +Y APEVL + SY +D+WS G I + P F ++ I D I L G
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 314 DFESEPWLL------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
D+ + L I + KDL+ K L +P KRI++ L HP+ +
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 356 E 356
+
Sbjct: 302 D 302
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 36/264 (13%)
Query: 65 QQPM--KSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITY---LCTENSTG 119
QQP+ KS R V K + VL ED+ LG+++GRG FG + L +N+
Sbjct: 89 QQPLTKKSGVVLHRAVPKDKWVLNH--EDL----VLGEQIGRGNFGEVFSGRLRADNTLV 142
Query: 120 NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSG 179
+C+ L L K +E +I++ S NIV G +Q +++VMEL G
Sbjct: 143 AVKSCRETLPPDLKAK-----FLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 180 GELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFM---GVMHRDLKPENFLLSNKDGGAM 236
G+ + +G L + + + ++ +HRDL N L++ K+ +
Sbjct: 197 GDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN---V 251
Query: 237 LKATDFGLS------VFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYIL 289
LK +DFG+S V G + + V + APE L Y E DVWS G++L+
Sbjct: 252 LKISDFGMSREEADGVXAASGGLRQVPVK---WTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 290 LS-GVPPFWAETEKGIFDAILKGG 312
S G P+ + + + + KGG
Sbjct: 309 FSLGASPYPNLSNQQTREFVEKGG 332
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 43/257 (16%)
Query: 143 REIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
RE+++++HL +N++ + ED V+LV L G + I+ +++
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEH 132
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
L ++ + + H G++HRDLKP N + N+D + L+ DFGL+ DE
Sbjct: 133 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV-NED--SELRILDFGLARQADEEMT--G 187
Query: 257 IVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPF----WAETEKGIFDAILK 310
V + +Y APE++ Y + +D+WS G I+ LL G F + + K I + +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 247
Query: 311 GGVD-------------FESEPWLLISD----------SAKDLVRKMLIQDPKKRITSAE 347
+ +S P + D A DL+ +ML+ D +R+++AE
Sbjct: 248 PSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAE 307
Query: 348 VLEHPWMREGGEASDKP 364
L H + + + D+P
Sbjct: 308 ALAHAYFSQYHDPEDEP 324
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A I I REI +++ L+ NIV+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 66
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + ++ + CH V+
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVL 125
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 126 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+++G G +G+ Y TG A I I REI +++ L+ NIV+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKELN-HPNIVK 65
Query: 160 FRGAYEDRQSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVM 217
++LV E + D G + L + ++ + CH V+
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVL 124
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR--RSYG 274
HRDLKP+N LL N +G +K DFGL+ F + Y V + +Y APE+L + Y
Sbjct: 125 HRDLKPQN-LLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETE----------KGIFDAILKGGV----DFE-SEP 319
+D+WS G I +++ F ++E G D ++ GV D++ S P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 320 -WLL---------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
W + + + L+ +ML DP KRI++ L HP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 45/294 (15%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +G G +G + +G A K L R ++ + RE+ +++H+ +
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKK-LSRPFQSEIFAKRAYRELLLLKHMQ-HE 101
Query: 156 NIVEFRGAYEDRQSV------HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
N++ + S+ +LVM KI+ ++E+ L ++ +
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLK 158
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H GV+HRDLKP N L N+D LK DFGL+ D V + +Y APEV+
Sbjct: 159 YIHSAGVVHRDLKPGN-LAVNED--CELKILDFGLARHADAEMT--GYVVTRWYRAPEVI 213
Query: 270 RR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GGVDF-------- 315
Y + +D+WS G I+ +L+G F + ILK G +F
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273
Query: 316 -----ESEP----------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+S P + S A DL+ KML D KR+T+A+ L HP+
Sbjct: 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 127/301 (42%), Gaps = 47/301 (15%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-----IKREIQIM 148
Q Y E+G G +G + + G + LKR V Q E+ RE+ ++
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA---LKR--VRVQTGEEGMPLSTIREVAVL 65
Query: 149 QHLSG--QQNIVEFRG----AYEDRQS-VHLVMELCSGG--ELFDKIIAQGHYTEKAAAA 199
+HL N+V + DR++ + LV E DK+ G TE
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259
+ + ++ + H V+HRDLKP+N L+++ +K DFGL+ +V
Sbjct: 126 MFQ-LLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVV 181
Query: 260 SAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI-LKGGV 313
+ +Y APEVL + SY +D+WS G I + P F ++ I D I L G
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 314 DFESEPWLL------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
D+ + L I + KDL+ K L +P KRI++ L HP+ +
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 356 E 356
+
Sbjct: 302 D 302
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 101 ELGRGQFGITYLCTENSTG-NSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+LG+G FG LC + G N+ A ++ + + + D +REIQI++ L IV+
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 72
Query: 160 FRGAY--EDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMG-- 215
+RG R + LVME G L D + Q H A+ L + ++G
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 216 -VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSA-YYVAPEVLR 270
+HRDL N L+ ++ A +K DFGL+ + K V R+ S ++ APE L
Sbjct: 131 RCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 271 RS-YGKEIDVWSAGVILYILLS 291
+ + ++ DVWS GV+LY L +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+G G+FG + G +C +I LK +Q RE + E IM NI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS-EASIMGQFE-HPNIIR 79
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMGVMH 218
G + V ++ E G L + + G +T + R I + + + M +H
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 219 RDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDIVGSAY---YVAPEVLR-R 271
RDL N L+++ + K +DFGLS F++E Y +G + APE + R
Sbjct: 140 RDLAARNILVNSN---LVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 272 SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308
+ D WS G++++ ++S G P+W + + + +AI
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 50/289 (17%)
Query: 59 PQPQPRQQPMKS----SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT 114
P+ Q R + ++S S T P Q P + E R GK LG G FG T
Sbjct: 10 PKYQVRWKIIESYEGNSYTFIDPTQLP---YNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 115 ENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
G A + + L + ++E + E++IM HL +NIV GA V
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 172 LVMELCSGGELFDKIIAQGHYTEK-AAAALCRAIVNVVHHCHFM-------------GVM 217
++ E C G+L + + + E A A+ + ++ HF +
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------A 265
HRD+ N LL+N G + K DFGL+ RDI+ + Y+ A
Sbjct: 187 HRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMA 234
Query: 266 PE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
PE + Y + DVWS G++L+ + S G+ P+ F ++K G
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 59/293 (20%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ------- 154
LG+G FG YA K I ++ I E+ ++ L+ Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 155 -----QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA-ALCRAIVNVV 208
+N V+ A + + ++ + ME C G L+D I ++ ++ L R I+ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----------- 257
+ H G++HRDLKP N + D +K DFGL+ V+R +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLP 181
Query: 258 ---------VGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEK-GIF 305
+G+A YVA EVL + Y ++ID++S G+I + + + PF E+ I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNIL 238
Query: 306 DAILKGGVDFESEPWLLISDSA----KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ ++F + D+ K ++R ++ DP KR + +L W+
Sbjct: 239 KKLRSVSIEFPPD----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 126/300 (42%), Gaps = 47/300 (15%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDRED-----IKREIQIM 148
Q Y E+G G +G + + G + LKR V Q E+ RE+ ++
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA---LKR--VRVQTGEEGMPLSTIREVAVL 65
Query: 149 QHLSG--QQNIVEFRG----AYEDRQS-VHLVMELCSGG--ELFDKIIAQGHYTEKAAAA 199
+HL N+V + DR++ + LV E DK+ G TE
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVG 259
+ + ++ + H V+HRDLKP+N L+++ +K DFGL+ +V
Sbjct: 126 MFQ-LLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVV 181
Query: 260 SAYYVAPEVL-RRSYGKEIDVWSAGVILYILLSGVPPFWAETEKG----IFDAI-LKGGV 313
+ +Y APEVL + SY +D+WS G I + P F ++ I D I L G
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 314 DFESEPWLL------------------ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMR 355
D+ + L I + KDL+ K L +P KRI++ L HP+ +
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR-KLVNKQDREDIKREIQIMQ 149
D R G ++G G FG+ Y N+T + A K + + ++ ++ +EI++M
Sbjct: 28 DERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMA 85
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-------QGHYTEKAAAALCR 202
+N+VE G D + LV G L D++ H K A
Sbjct: 86 KCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 144
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL---SVFIDEGKVYRDIVG 259
I N +H H + HRD+K N LL D K +DFGL S + + IVG
Sbjct: 145 GI-NFLHENHHI---HRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 260 SAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVP 294
+ Y+APE LR + D++S GV+L +++G+P
Sbjct: 198 TTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE- 194
Q E++++E ++ L NI+ RG ++ LVME GG L +++++
Sbjct: 48 QTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPD 105
Query: 195 ---KAAAALCRAIVNVVHHCHFMGVMHRDLKPENFL---------LSNKDGGAMLKATDF 242
A + R + N +H + ++HRDLK N L LSNK +LK TDF
Sbjct: 106 ILVNWAVQIARGM-NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK----ILKITDF 160
Query: 243 GLSVFIDEGKVYRDIVGSAY-YVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPF 296
GL+ + + + AY ++APEV+R S + K DVWS GV+L+ LL+G PF
Sbjct: 161 GLAR--EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 40 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 92
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 153 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHY 207
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEKGIFDAILKG 311
+ D+WS G+ L + G +PP A+ + +F ++G
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR-KLVNKQDREDIKREIQIMQ 149
D R G ++G G FG+ Y N+T + A K + + ++ ++ +EI++M
Sbjct: 28 DERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMA 85
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-------QGHYTEKAAAALCR 202
+N+VE G D + LV G L D++ H K A
Sbjct: 86 KCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 144
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL---SVFIDEGKVYRDIVG 259
I N +H H + HRD+K N LL D K +DFGL S + + IVG
Sbjct: 145 GI-NFLHENHHI---HRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 260 SAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVP 294
+ Y+APE LR + D++S GV+L +++G+P
Sbjct: 198 TTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
++VME G L D + +G T K A + ++ H G++HRD+KP N ++S
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 231 KDGGAMLKATDFGLSVFI-DEGKVYRD---IVGSAYYVAPEVLR-RSYGKEIDVWSAGVI 285
+ +K DFG++ I D G ++G+A Y++PE R S DV+S G +
Sbjct: 169 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 286 LYILLSGVPPFWAET 300
LY +L+G PPF ++
Sbjct: 226 LYEVLTGEPPFTGDS 240
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 72
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 130
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HR+L N L+ N++ +K DFGL+ + + K Y + ++ AP
Sbjct: 131 LGTKRYIHRNLATRNILVENEN---RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHY 180
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEKGIFDAILKG 311
+ D+WS G+ L + G +PP A+ + +F ++G
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 43/257 (16%)
Query: 143 REIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
RE+++++HL +N++ + ED V+LV L G +L + + Q +++
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA-LSDEH 132
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
L ++ + + H G++HRDLKP N + N+D + L+ DFGL+ DE
Sbjct: 133 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV-NED--SELRILDFGLARQADEEMT--G 187
Query: 257 IVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPF----WAETEKGIFDAILK 310
V + +Y APE++ Y + +D+WS G I+ LL G F + + K I + +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 247
Query: 311 GGVD-------------FESEPWLLISD----------SAKDLVRKMLIQDPKKRITSAE 347
+ +S P + D A DL+ +ML+ D +R+++AE
Sbjct: 248 PSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAE 307
Query: 348 VLEHPWMREGGEASDKP 364
L H + + + D+P
Sbjct: 308 ALAHAYFSQYHDPEDEP 324
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 50/289 (17%)
Query: 59 PQPQPRQQPMKS----SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT 114
P+ Q R + ++S S T P Q P + E R GK LG G FG T
Sbjct: 10 PKYQVRWKIIESYEGNSYTFIDPTQLP---YNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 115 ENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
G A + + L + ++E + E++IM HL +NIV GA V
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 172 LVMELCSGGELFDKIIAQGHYTEK-AAAALCRAIVNVVHHCHFM-------------GVM 217
++ E C G+L + + + E A A+ + + HF +
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------A 265
HRD+ N LL+N G + K DFGL+ RDI+ + Y+ A
Sbjct: 187 HRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMA 234
Query: 266 PE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
PE + Y + DVWS G++L+ + S G+ P+ F ++K G
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR-KLVNKQDREDIKREIQIMQ 149
D R G ++G G FG+ Y N+T + A K + + ++ ++ +EI++M
Sbjct: 22 DERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMA 79
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-------QGHYTEKAAAALCR 202
+N+VE G D + LV G L D++ H K A
Sbjct: 80 KCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 138
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL---SVFIDEGKVYRDIVG 259
I N +H H + HRD+K N LL D K +DFGL S + + IVG
Sbjct: 139 GI-NFLHENHHI---HRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 260 SAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVP 294
+ Y+APE LR + D++S GV+L +++G+P
Sbjct: 192 TTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 71
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + + ++ AP
Sbjct: 130 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 45/282 (15%)
Query: 99 GKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIV 158
G+ LG+G FG T TG K +++ +++ + +E+++M+ L N++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPNVL 70
Query: 159 EFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMGVM 217
+F G + ++ + E GG L I + Y + + I + + + H M ++
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 218 HRDLKPENFLL-SNKDGGAMLKATDFGLS-VFIDEG--------------KVYRDIVGSA 261
HRDL N L+ NK+ + DFGL+ + +DE K +VG+
Sbjct: 131 HRDLNSHNCLVRENKN----VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 262 YYVAPEVLR-RSYGKEIDVWSAGVILYILLSGV---PPFWAETEKGIFDAILKGGVDFES 317
Y++APE++ RSY +++DV+S G++L ++ V P + T F ++G +D
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRGFLDRYC 244
Query: 318 EP-----WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
P + I+ DL DP+KR + + LEH W+
Sbjct: 245 PPNCPPSFFPITVRCCDL-------DPEKRPSFVK-LEH-WL 277
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHY 180
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEKGIFDAILKG 311
+ D+WS G+ L + G +PP A+ + +F ++G
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 74
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEY 132
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 133 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 45/294 (15%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y +G G +G + +G A K L R ++ + RE+ +++H+ +
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKK-LSRPFQSEIFAKRAYRELLLLKHMQ-HE 83
Query: 156 NIVEFRGAYEDRQSV------HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
N++ + S+ +LVM KI+ ++E+ L ++ +
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLK-FSEEKIQYLVYQMLKGLK 140
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL 269
+ H GV+HRDLKP N L N+D LK DFGL+ D V + +Y APEV+
Sbjct: 141 YIHSAGVVHRDLKPGN-LAVNED--CELKILDFGLARHADAEMT--GYVVTRWYRAPEVI 195
Query: 270 RR--SYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILK----GGVDF-------- 315
Y + +D+WS G I+ +L+G F + ILK G +F
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255
Query: 316 -----ESEP----------WLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+S P + S A DL+ KML D KR+T+A+ L HP+
Sbjct: 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 38/187 (20%)
Query: 204 IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY 263
++ + +CH G+MHRD+KP N ++ ++ L+ D+GL+ F + Y V S Y+
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMIDHQQ--KKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 264 VAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE--------------KGIFDA 307
PE+L + Y +D+WS G +L ++ PF+ + + ++
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 263
Query: 308 ILKGGVDFE--------------------SEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
+ K +D + SE L+S A DL+ K+L D ++R+T+ E
Sbjct: 264 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 323
Query: 348 VLEHPWM 354
+EHP+
Sbjct: 324 AMEHPYF 330
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLER-- 470
+ G+I+ +EL + LG + E+++++D D DG+GT+D+ EF+ + + +
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 471 --DEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYE 527
+E L F+ FDK+ GYI +EL+ ++ G E I+E++ + D +NDGRI+Y+
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 528 EFCTMMR 534
EF M+
Sbjct: 152 EFLEFMK 158
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
++K ++ +EEE+ L MF D + G I EELK L G ++E ++++LM
Sbjct: 84 SMKDDSKGKTEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 446 DVDGNGTIDYIEFI 459
D + +G IDY EF+
Sbjct: 141 DKNNDGRIDYDEFL 154
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHY 180
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEKGIFDAILKG 311
+ D+WS G+ L + G +PP A+ + +F ++G
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ + + +G ++ RKL++ + R I RE+Q++ H
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCH-FMG 215
IV F GA+ + + ME GG L + G E+ + A++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLRRS-Y 273
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y++PE L+ + Y
Sbjct: 126 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID--SMANSFVGTRSYMSPERLQGTHY 180
Query: 274 GKEIDVWSAGVILYILLSG---VPPFWAETEKGIFDAILKG 311
+ D+WS G+ L + G +PP A+ + +F ++G
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 43/257 (16%)
Query: 143 REIQIMQHLSGQQNIVEFRGAY------EDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
RE+++++HL +N++ + ED V+LV L G +L + + Q +++
Sbjct: 68 RELRLLKHLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA-LSDEH 124
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
L ++ + + H G++HRDLKP N + N+D L+ DFGL+ DE
Sbjct: 125 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV-NED--CELRILDFGLARQADEEMT--G 179
Query: 257 IVGSAYYVAPEVLRR--SYGKEIDVWSAGVILYILLSGVPPF----WAETEKGIFDAILK 310
V + +Y APE++ Y + +D+WS G I+ LL G F + + K I + +
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 239
Query: 311 GGVD-------------FESEPWLLISD----------SAKDLVRKMLIQDPKKRITSAE 347
+ +S P + D A DL+ +ML+ D +R+++AE
Sbjct: 240 PSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAE 299
Query: 348 VLEHPWMREGGEASDKP 364
L H + + + D+P
Sbjct: 300 ALAHAYFSQYHDPEDEP 316
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE--- 469
+ G+I+ +EL + LG + E+++++D D DG+GT+D+ EF+ + + +
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 470 -RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYE 527
+E L F+ FDK+ GYI +EL+ ++ G E I+E++ + D +NDGRI+Y+
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 528 EFCTMMR 534
EF M+
Sbjct: 152 EFLEFMK 158
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
++K ++ SEEE+ L MF D + G I EELK L G ++E ++++LM
Sbjct: 84 SMKDDSKGKSEEELSDLFRMF---DKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 446 DVDGNGTIDYIEFI 459
D + +G IDY EF+
Sbjct: 141 DKNNDGRIDYDEFL 154
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 102
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 160
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 161 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE--- 469
+ G+I+ +EL + LG + E+++++D D DG+GT+D+ EF+ + + +
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 470 -RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYE 527
+E L F+ +DK+ GYI DEL+ ++ G E I+E++ + D +NDGRI+Y+
Sbjct: 92 KSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 528 EFCTMMR 534
EF M+
Sbjct: 152 EFLEFMK 158
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
++K ++ SEEE+ L M+ D + G I +ELK L G ++E ++++LM
Sbjct: 84 SMKDDSKGKSEEELSDLFRMW---DKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 446 DVDGNGTIDYIEFI 459
D + +G IDY EF+
Sbjct: 141 DKNNDGRIDYDEFL 154
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE--- 469
+ G+I+ +EL + LG + E+++++D D DG+GT+D+ EF+ + + +
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 470 -RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYE 527
+E L F+ FDK+ GYI DEL+ ++ G E I+E++ + D +NDGRI+Y+
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 528 EFCTMMR 534
E+ M+
Sbjct: 152 EWLEFMK 158
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
++K ++ SEEE+ L MF D + G I +ELK L G ++E ++++LM
Sbjct: 84 SMKDDSKGKSEEELSDLFRMF---DKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 446 DVDGNGTIDYIEFI 459
D + +G IDY E++
Sbjct: 141 DKNNDGRIDYDEWL 154
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 21/266 (7%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEF 160
ELGRG +G+ +G A K I R VN Q+++ + ++ I V F
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 161 RGAYEDRQSVHLVMEL--CSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHF-MGV 216
GA V + EL S + + ++I +G E + +IV + H H + V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI-VGSAYYVAPEVL-----R 270
+HRD+KP N L+ + +K DFG+S ++ + V +DI G Y APE + +
Sbjct: 159 IHRDVKPSNVLI---NALGQVKXCDFGISGYLVD-DVAKDIDAGCKPYXAPERINPELNQ 214
Query: 271 RSYGKEIDVWSAGVILYILLSGVPPF--WAETEKGIFDAILKGGVDFESEPWLLISDSAK 328
+ Y + D+WS G+ L P+ W + + + + ++ + S
Sbjct: 215 KGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFV 271
Query: 329 DLVRKMLIQDPKKRITSAEVLEHPWM 354
D + L ++ K+R T E+ +HP+
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 15 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 69
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + A + + K + R + + H
Sbjct: 70 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 128
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L + +K DFGL+ + + GS ++APEV+R
Sbjct: 129 IIHRDLKSNNIFLHEDN---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 75
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 133
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 134 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 74
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 132
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 133 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 77
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 135
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 136 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 124/273 (45%), Gaps = 50/273 (18%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G G FG + G +Y K + K + E +RE++ + L NIV +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRV-------KYNNEKAEREVKALAKLD-HVNIVHYN 70
Query: 162 GAYE----------------DRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAA-ALCRA 203
G ++ + + + ME C G L I +G +K A L
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 204 IVNVVHHCHFMGVMHRDLKPEN-FLLSNKDGGAMLKATDFGLSVFI-DEGKVYRDIVGSA 261
I V + H +++RDLKP N FL+ K +K DFGL + ++GK R G+
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTK----QVKIGDFGLVTSLKNDGKRXRS-KGTL 185
Query: 262 YYVAPE-VLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPW 320
Y++PE + + YGKE+D+++ G+IL LL V ET K D L+ G+
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDTAFETSKFFTD--LRDGI------- 235
Query: 321 LLISD----SAKDLVRKMLIQDPKKRITSAEVL 349
ISD K L++K+L + P+ R ++E+L
Sbjct: 236 --ISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 76
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 134
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 135 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 101 ELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD----REDIKREIQIMQHLSGQQN 156
ELG G G+ +G I+ RKL++ + R I RE+Q++ H
Sbjct: 23 ELGAGNGGVVTKVQHRPSG------LIMARKLIHLEIKPAIRNQIIRELQVL-HECNSPY 75
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTE-----KAAAALCRAIVNVVHHC 211
IV F GA+ + + ME GG L D+++ + K + A+ R + +
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAYYVAPEVLR 270
+MHRD+KP N L++++ +K DFG+S ID + VG+ Y+APE L+
Sbjct: 135 Q---IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID--SMANSFVGTRSYMAPERLQ 186
Query: 271 RS-YGKEIDVWSAGVILYILLSG---VPPFWAETEKGIF 305
+ Y + D+WS G+ L L G +PP A+ + IF
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 70
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 128
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 129 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 69
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 127
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 128 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 78
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 136
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 137 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 71
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 130 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 30/243 (12%)
Query: 88 PLEDIRQF--------YTLGKELGRGQFGITYLCTEN----STGNSYACKSILKRKLVNK 135
P E +R+F + + +G G+FG +C+ + + LK K
Sbjct: 19 PNEAVREFAKEIDISCVKIEQVIGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGYTEK 76
Query: 136 QDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYT 193
Q R D E IM N++ G V ++ E G L D + Q G +T
Sbjct: 77 Q-RRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFT 133
Query: 194 EKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK- 252
+ R I + + M +HRDL N L+++ + K +DFGLS F+++
Sbjct: 134 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEDDTS 190
Query: 253 --VYRDIVGSAY---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305
Y +G + APE ++ R + DVWS G++++ ++S G P+W T + +
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 250
Query: 306 DAI 308
+AI
Sbjct: 251 NAI 253
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 71
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 130 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 89
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 147
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 148 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 89
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L D + Q H L + + +
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEY 147
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 148 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 100 KELGRGQFGITYLC----TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
++LG+G FG +C +++TG A K K + ++ D +REI+I++ L
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKSLQ-HD 74
Query: 156 NIVEFRGAYED--RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+++G R+++ L+ME G L + + Q H L + + +
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEY 132
Query: 214 MGV---MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV----GSAYYVAP 266
+G +HRDL N L+ N++ +K DFGL+ + + K + ++ AP
Sbjct: 133 LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 267 EVLRRS-YGKEIDVWSAGVILYILLSGV 293
E L S + DVWS GV+LY L + +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 27 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 81
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + A + + K + R + + H
Sbjct: 82 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L + +K DFGL+ + + GS ++APEV+R
Sbjct: 141 IIHRDLKSNNIFLHEDN---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 24/240 (10%)
Query: 88 PLEDIRQF--------YTLGKELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQD 137
P E +R+F + + +G G+FG + G +C +I LK +Q
Sbjct: 2 PNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR 61
Query: 138 REDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKA 196
RE + E IM NI+ G + V ++ E G L + + G +T
Sbjct: 62 REFLS-EASIMGQFE-HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ 119
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD 256
+ R I + + + M +HRDL N L+++ + K +DFGLS F++E
Sbjct: 120 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEENSSDPT 176
Query: 257 IVGS------AYYVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308
S + APE + R + D WS G++++ ++S G P+W + + + +AI
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 236
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE--- 469
+ G+I+ +EL + LG + E+++++D D DG+GT+D+ EF+ + + +
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 470 -RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYE 527
+E L F+ DK+ GYI DEL+ ++ G E I+E++ + D +NDGRI+Y+
Sbjct: 92 KSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 528 EFCTMMR 534
EF M+
Sbjct: 152 EFLEFMK 158
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
++K ++ SEEE L +F D + G I +ELK L G ++E ++++LM
Sbjct: 84 SMKDDSKGKSEEE---LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 446 DVDGNGTIDYIEFI 459
D + +G IDY EF+
Sbjct: 141 DKNNDGRIDYDEFL 154
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 413 KSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLE--- 469
+ G+I+ +EL + LG + E+++++D D DG+GT+D+ EF+ + + +
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 470 -RDEHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYE 527
+E L F+ FDK+ GYI DEL+ ++ G E I+E++ + D +NDGRI+Y+
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 528 EFCTMMR 534
E M+
Sbjct: 152 EXLEFMK 158
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 386 ALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
++K ++ SEEE+ L MF D + G I +ELK L G ++E ++++LM
Sbjct: 84 SMKDDSKGKSEEELSDLFRMF---DKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 446 DVDGNGTIDYIEFI 459
D + +G IDY E +
Sbjct: 141 DKNNDGRIDYDEXL 154
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 388 KVIAEALSEEEIKGLKTMFANMDTD-KSGTITYEELKTGLARLGSKLSETEVKQLMDAAD 446
K E L+EE+ K F + G I+ +EL + LG + E+++++D D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 447 VDGNGTIDYIEFISATMHRYRLER----DEHLYKAFQYFDKDNSGYITRDELETAMKDYG 502
DG+GT+D+ EF+ + + + +E L F+ FDK+ GYI +EL+ ++ G
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG 125
Query: 503 -IGDEASIKEIISEVDTDNDGRINYEEFCTMMR 534
E I+E++ + D +NDGRI+Y+EF M+
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 46/314 (14%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D+ Y + + +G G +G+ TG A K I V + + RE++I++H
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKH 110
Query: 151 LSGQQNIVEFRG------AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
NI+ + Y + +SV++V++L +L I + T + +
Sbjct: 111 FK-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-----DEGKVYRDIVG 259
+ + + H V+HRDLKP N L++ LK DFG++ + + + V
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNE---NCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 260 SAYYVAPEVL--RRSYGKEIDVWSAGVI---------------------LYILLSGVPPF 296
+ +Y APE++ Y + ID+WS G I L +++ G P
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 285
Query: 297 WAETEKGI--FDAILKGGVDFESEPWLLISDSAK----DLVRKMLIQDPKKRITSAEVLE 350
G A ++ + PW + A L+ +ML +P RI++A L
Sbjct: 286 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 351 HPWMREGGEASDKP 364
HP++ + + D+P
Sbjct: 346 HPFLAKYHDPDDEP 359
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 59/293 (20%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ------- 154
LG+G FG YA K I ++ I E+ ++ L+ Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 155 -----QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA-ALCRAIVNVV 208
+N V+ A + + ++ + ME C L+D I ++ ++ L R I+ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----------- 257
+ H G++HRDLKP N + D +K DFGL+ V+R +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLP 181
Query: 258 ---------VGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEK-GIF 305
+G+A YVA EVL + Y ++ID++S G+I + + + PF E+ I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNIL 238
Query: 306 DAILKGGVDFESEPWLLISDSA----KDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ ++F + D+ K ++R ++ DP KR + +L W+
Sbjct: 239 KKLRSVSIEFPPD----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 46/314 (14%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
D+ Y + + +G G +G+ TG A K I V + + RE++I++H
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKH 109
Query: 151 LSGQQNIVEFRG------AYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAI 204
NI+ + Y + +SV++V++L +L I + T + +
Sbjct: 110 FK-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-----DEGKVYRDIVG 259
+ + + H V+HRDLKP N L++ LK DFG++ + + + V
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLVNE---NCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 260 SAYYVAPEVL--RRSYGKEIDVWSAGVI---------------------LYILLSGVPPF 296
+ +Y APE++ Y + ID+WS G I L +++ G P
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284
Query: 297 WAETEKGI--FDAILKGGVDFESEPWLLISDSAK----DLVRKMLIQDPKKRITSAEVLE 350
G A ++ + PW + A L+ +ML +P RI++A L
Sbjct: 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 351 HPWMREGGEASDKP 364
HP++ + + D+P
Sbjct: 345 HPFLAKYHDPDDEP 358
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 146/360 (40%), Gaps = 82/360 (22%)
Query: 66 QPMKSSATSTRPVQ--KPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYA 123
Q M+SS S+R V+ K ++ + + +++ Y + LG G FG C +++ G S
Sbjct: 21 QSMQSSKRSSRSVEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQV 80
Query: 124 CKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGEL 182
I++ V K RE + EI +++ + + +F D + H +C EL
Sbjct: 81 ALKIIRN--VGKY-REAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH--GHMCIAFEL 135
Query: 183 FDK----IIAQGHY-------TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNK 231
K + + ++ A LC A+ + H + H DLKPEN L N
Sbjct: 136 LGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL----HENQLTHTDLKPENILFVNS 191
Query: 232 DGGAM----------------LKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYG 274
+ + ++ DFG + F E + IV + +Y PEV L +
Sbjct: 192 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWA 249
Query: 275 KEIDVWSAGVILYILLSGVPPFWAETEKG---IFDAIL------------------KGGV 313
+ DVWS G IL+ G F + + + IL KGG+
Sbjct: 250 QPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL 309
Query: 314 DFE------------SEPW--LLISDSAK-----DLVRKMLIQDPKKRITSAEVLEHPWM 354
++ +P ++ DS + DL+R+ML DP +RIT AE L HP+
Sbjct: 310 VWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 128/334 (38%), Gaps = 78/334 (23%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
LE + Y+LGK LG G FGI + +G +A K +L QD RE+ IM
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL-------QDPRYKNRELDIM 54
Query: 149 QHLSGQQNIVEF----------------------------RGAYEDRQSV---------- 170
+ L NI++ G +SV
Sbjct: 55 KVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 171 HLVMELCSGG--ELFDKIIAQGHYTEKAAAAL-CRAIVNVVHHCHFMGVMHRDLKPENFL 227
+++ME ++ I G ++ + V H +G+ HRD+KP+N L
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 228 LSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVL--RRSYGKEIDVWSAGVI 285
+++KD LK DFG + + + + S +Y APE++ Y ID+WS G +
Sbjct: 174 VNSKDN--TLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCV 231
Query: 286 LYILLSGVPPFWAETEKGIFDAILK-----------------GGVDF---ESEPWLLI-- 323
L+ G P F ET I++ V F +++ W I
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291
Query: 324 ---SDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
A DL+ ++L +P RI E + HP+
Sbjct: 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 27 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 81
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-QGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + +V + C G L+ + A + + K + R + + H
Sbjct: 82 ILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L + +K DFGL+ + + GS ++APEV+R
Sbjct: 141 IIHRDLKSNNIFLHEDN---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
+L EEI+ L+ F D DK G I +L + +G +E E+ +L +++ G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 453 IDYIEFISATMHRYRLERDE-----HLYKAFQYFDKDNSGYITRDELETAMKD---YGIG 504
+D+ +F+ + E + L AF+ FD + G I+ EL AM+ + +G
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
I+EII +VD + DGR+++EEF MM
Sbjct: 138 -HRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-LGSKLSETEVKQLMD 443
M K++AE +K L+ F DT+ G I+ EL+ + + LG ++ ++++++
Sbjct: 87 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 146
Query: 444 AADVDGNGTIDYIEFI 459
D++G+G +D+ EF+
Sbjct: 147 DVDLNGDGRVDFEEFV 162
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 14/270 (5%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F E+GRG F Y + T A + RKL K +R+ K E + ++ L
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGLQ- 83
Query: 154 QQNIVEFRGAYED----RQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
NIV F ++E ++ + LV EL + G L + K + CR I+ +
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 210 HCHFMG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
H ++HRDLK +N ++ G +K D GL+ + + ++G+ + APE
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGLAT-LKRASFAKAVIGTPEFXAPE 200
Query: 268 VLRRSYGKEIDVWSAG-VILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDS 326
Y + +DV++ G L S P + I+ + GV S + I +
Sbjct: 201 XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVT-SGVKPASFDKVAIPE- 258
Query: 327 AKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
K+++ + Q+ +R + ++L H + +E
Sbjct: 259 VKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQQNIVE 159
+G G+FG G +I LK KQ R D E IM N+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFD-HPNVVH 108
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMGVM 217
G + V +V+E G L D + + G +T + R I + + MG +
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 218 HRDLKPENFLLSNKDGGAMLKATDFGLSVFI--DEGKVYRDIVGS--AYYVAPEVLR-RS 272
HRDL N L+++ + K +DFGLS I D VY G + APE ++ R
Sbjct: 168 HRDLAARNILVNSN---LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 273 YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ DVWS G++++ ++S G P+W + + + AI +G
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 16 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 70
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 71 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 130 IIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 16 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 70
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 71 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 130 IIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 38 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 92
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 93 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 152 IIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 39 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 93
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 94 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 153 IIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T +E+G GQFG+ +L + + A K+I + ED E ++M LS
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIRE----GAMSEEDFIEEAEVMMKLS-HPK 63
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + LV E G L D + Q G + + +C + + +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
V+HRDL N L+ ++K +DFG++ F+ + + Y G+ + + +PEV S
Sbjct: 124 VIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 273 -YGKEIDVWSAGVILYILLS 291
Y + DVWS GV+++ + S
Sbjct: 180 RYSSKSDVWSFGVLMWEVFS 199
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 11 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 66 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 125 IIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 13 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 67
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 68 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 127 IIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 45/286 (15%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F+ L K +G G+FG + C + G YA K K+ L D ++ RE+ L
Sbjct: 10 EFHELEK-IGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVH 209
++V + A+ + + + E C+GG L D I ++ E L + +
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 210 HCHFMGVMHRDLKPENFLLS------------NKDGGA----MLKATDFGLSVFIDEGKV 253
+ H M ++H D+KP N +S ++D A M K D G I +V
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 254 YRDIVGSAYYVAPEVLRRSYGK--EIDVWSAGVILYILLSGVPPF------WAETEKGIF 305
G + ++A EVL+ +Y + D+++ + + + +G P W E +G
Sbjct: 188 EE---GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRL 243
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
I + ++S +L++ M+ DP++R ++ +++H
Sbjct: 244 PRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 45/286 (15%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F+ L K +G G+FG + C + G YA K K+ L D ++ RE+ L
Sbjct: 8 EFHELEK-IGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVH 209
++V + A+ + + + E C+GG L D I ++ E L + +
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 210 HCHFMGVMHRDLKPENFLLS------------NKDGGA----MLKATDFGLSVFIDEGKV 253
+ H M ++H D+KP N +S ++D A M K D G I +V
Sbjct: 126 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 185
Query: 254 YRDIVGSAYYVAPEVLRRSYGK--EIDVWSAGVILYILLSGVPPF------WAETEKGIF 305
G + ++A EVL+ +Y + D+++ + + + +G P W E +G
Sbjct: 186 EE---GDSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRL 241
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
I + ++S +L++ M+ DP++R ++ +++H
Sbjct: 242 PRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 45/286 (15%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F+ L K +G G+FG + C + G YA K K+ L D ++ RE+ L
Sbjct: 10 EFHELEK-IGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVH 209
++V + A+ + + + E C+GG L D I ++ E L + +
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 210 HCHFMGVMHRDLKPENFLLS------------NKDGGA----MLKATDFGLSVFIDEGKV 253
+ H M ++H D+KP N +S ++D A M K D G I +V
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 254 YRDIVGSAYYVAPEVLRRSYGK--EIDVWSAGVILYILLSGVPPF------WAETEKGIF 305
G + ++A EVL+ +Y + D+++ + + + +G P W E +G
Sbjct: 188 EE---GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRL 243
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
I + ++S +L++ M+ DP++R ++ +++H
Sbjct: 244 PRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 61/285 (21%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFR 161
+G G FG + G +Y + + K + E +RE++ + L NIV +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV-------KYNNEKAEREVKALAKLD-HVNIVHYN 71
Query: 162 GAYE-----------------------------DRQSVHLVMELCSGGELFDKI-IAQGH 191
G ++ + + + ME C G L I +G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 192 YTEKAAA-ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI-D 249
+K A L I V + H ++HRDLKP N L + +K DFGL + +
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD---TKQVKIGDFGLVTSLKN 188
Query: 250 EGKVYRDIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI 308
+GK R G+ Y++PE + + YGKE+D+++ G+IL LL V ET K D
Sbjct: 189 DGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDTAFETSKFFTD-- 244
Query: 309 LKGGVDFESEPWLLISD----SAKDLVRKMLIQDPKKRITSAEVL 349
L+ G+ ISD K L++K+L + P+ R ++E+L
Sbjct: 245 LRDGI---------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 45/286 (15%)
Query: 94 QFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
+F+ L K +G G+FG + C + G YA K K+ L D ++ RE+ L
Sbjct: 12 EFHELEK-IGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ----GHYTEKAAAALCRAIVNVVH 209
++V + A+ + + + E C+GG L D I ++ E L + +
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 210 HCHFMGVMHRDLKPENFLLS------------NKDGGA----MLKATDFGLSVFIDEGKV 253
+ H M ++H D+KP N +S ++D A M K D G I +V
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 254 YRDIVGSAYYVAPEVLRRSYGK--EIDVWSAGVILYILLSGVPPF------WAETEKGIF 305
G + ++A EVL+ +Y + D+++ + + + +G P W E +G
Sbjct: 190 EE---GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRL 245
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEH 351
I + ++S +L++ M+ DP++R ++ +++H
Sbjct: 246 PRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
+L EEI+ L+ F D DK G I +L + +G +E E+ +L +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 453 IDYIEFISATMHRYRLERDE-----HLYKAFQYFDKDNSGYITRDELETAMKD---YGIG 504
+D+ +F+ + E + L AF+ FD + G I+ EL AM+ + +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 123
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
I+EII +VD + DGR+++EEF MM
Sbjct: 124 -HRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLAR-LGSKLSETEVKQLMD 443
M K++AE +K L+ F DT+ G I+ EL+ + + LG ++ ++++++
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 132
Query: 444 AADVDGNGTIDYIEFI 459
D++G+G +D+ EF+
Sbjct: 133 DVDLNGDGRVDFEEFV 148
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 393 ALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
+L EEI+ L+ F D DK G I +L + +G +E E+ +L +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 453 IDYIEFISATMHRYRLERDE-----HLYKAFQYFDKDNSGYITRDELETAMK---DYGIG 504
+D+ +F+ + E + L AF+ FD + G I+ EL AM+ + +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVG 123
Query: 505 DEASIKEIISEVDTDNDGRINYEEFCTMM 533
I+EII +VD + DGR+++EEF MM
Sbjct: 124 -HRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 385 MALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGL-ARLGSKLSETEVKQLMD 443
M K++AE +K L+ F DT+ G I+ EL+ + A LG ++ ++++++
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIR 132
Query: 444 AADVDGNGTIDYIEFI 459
D++G+G +D+ EF+
Sbjct: 133 DVDLNGDGRVDFEEFV 148
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 114/275 (41%), Gaps = 58/275 (21%)
Query: 59 PQPQPRQQPMKS----SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT 114
P+ Q R + ++S S T P Q P + E R GK LG G FG T
Sbjct: 10 PKYQVRWKIIESYEGNSYTFIDPTQLP---YNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 115 ENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
G A + + L + ++E + E++IM HL +NIV GA V
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAAAAL---------CRAIVN----VVHHCHFMG--- 215
++ E C G+L + + KA A L R +++ V F+
Sbjct: 127 VITEYCCYGDLLNFL------RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 180
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV----------- 264
+HRD+ N LL+N G + K DFGL+ RDI+ + Y+
Sbjct: 181 CIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKW 228
Query: 265 -APE-VLRRSYGKEIDVWSAGVILYILLS-GVPPF 296
APE + Y + DVWS G++L+ + S G+ P+
Sbjct: 229 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T +E+G GQFG+ +L + A K+I + ED E ++M LS
Sbjct: 13 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLS-HPK 66
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + LV E G L D + Q G + + +C + + +
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
V+HRDL N L+ ++K +DFG++ F+ + + Y G+ + + +PEV S
Sbjct: 127 VIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 182
Query: 273 -YGKEIDVWSAGVILYILLS 291
Y + DVWS GV+++ + S
Sbjct: 183 RYSSKSDVWSFGVLMWEVFS 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T +E+G GQFG+ +L + A K+I + ED E ++M LS
Sbjct: 8 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLS-HPK 61
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + LV E G L D + Q G + + +C + + +
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
V+HRDL N L+ ++K +DFG++ F+ + + Y G+ + + +PEV S
Sbjct: 122 VIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 177
Query: 273 -YGKEIDVWSAGVILYILLS 291
Y + DVWS GV+++ + S
Sbjct: 178 RYSSKSDVWSFGVLMWEVFS 197
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +GRG +G YL + +T + A K + R + D + I REI I+ L
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSDY 86
Query: 156 NIVEFRGAYEDR----QSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
I + D +++V+E+ +LF I TE+ + ++ +
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEEHIKTILYNLLLGEN 143
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDI--------- 257
H G++HRDLKP N LL N+D K DFGL+ I+ K + D+
Sbjct: 144 FIHESGIIHRDLKPANCLL-NQDCSV--KVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 258 -----------VGSAYYVAPE--VLRRSYGKEIDVWSAGVILYILLS 291
V + +Y APE +L+ +Y K ID+WS G I LL+
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
ISD +L+ ML +P KRIT + L+HP++++
Sbjct: 334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 82/340 (24%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREI 145
G+P +D R Y L ++LG G F +L ++ N++ I++ V + ED EI
Sbjct: 13 GEPYKDAR--YILVRKLGWGHFSTVWLA-KDMVNNTHVAMKIVRGDKVYTEAAED---EI 66
Query: 146 QIMQHLS----------GQQNIVEFRGAYEDR--QSVHLVMELCSGGELFDKIIAQGH-- 191
+++Q ++ G +I++ + + VH+VM GE +I +
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 192 -----YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML---KATDFG 243
Y ++ + L + + C G++H D+KPEN L+ D L K D G
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 244 LSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEK 302
+ + DE Y + + + Y +PEVL + +G D+WS +++ L++G F E ++
Sbjct: 184 NACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDE 239
Query: 303 G-------------------IFDAILKGGV------------------------DFESEP 319
G + +L+ G D +E
Sbjct: 240 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK 299
Query: 320 WLLISDSAK---DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ D AK D + ML DP+KR + ++ HPW+++
Sbjct: 300 YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 82/340 (24%)
Query: 86 GKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREI 145
G+P +D R Y L ++LG G F +L ++ N++ I++ V + ED EI
Sbjct: 13 GEPYKDAR--YILVRKLGWGHFSTVWLA-KDMVNNTHVAMKIVRGDKVYTEAAED---EI 66
Query: 146 QIMQHLS----------GQQNIVEFRGAYEDR--QSVHLVMELCSGGELFDKIIAQGH-- 191
+++Q ++ G +I++ + + VH+VM GE +I +
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 192 -----YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAML---KATDFG 243
Y ++ + L + + C G++H D+KPEN L+ D L K D G
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 244 LSVFIDEGKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLSGVPPFWAETEK 302
+ + DE Y + + + Y +PEVL + +G D+WS +++ L++G F E ++
Sbjct: 184 NACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDE 239
Query: 303 G-------------------IFDAILKGGV------------------------DFESEP 319
G + +L+ G D +E
Sbjct: 240 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK 299
Query: 320 WLLISDSAK---DLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ D AK D + ML DP+KR + ++ HPW+++
Sbjct: 300 YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T +E+G GQFG+ +L + A K+I + ED E ++M LS
Sbjct: 10 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLS-HPK 63
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + LV E G L D + Q G + + +C + + +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
V+HRDL N L+ ++K +DFG++ F+ + + Y G+ + + +PEV S
Sbjct: 124 VIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 273 -YGKEIDVWSAGVILYILLS 291
Y + DVWS GV+++ + S
Sbjct: 180 RYSSKSDVWSFGVLMWEVFS 199
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 114/275 (41%), Gaps = 58/275 (21%)
Query: 59 PQPQPRQQPMKS----SATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCT 114
P+ Q R + ++S S T P Q P + E R GK LG G FG T
Sbjct: 2 PKYQVRWKIIESYEGNSYTFIDPTQLP---YNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 58
Query: 115 ENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVH 171
G A + + L + ++E + E++IM HL +NIV GA V
Sbjct: 59 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 118
Query: 172 LVMELCSGGELFDKIIAQGHYTEKAAAAL---------CRAIVN----VVHHCHFMG--- 215
++ E C G+L + + KA A L R +++ V F+
Sbjct: 119 VITEYCCYGDLLNFL------RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 172
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV----------- 264
+HRD+ N LL+N G + K DFGL+ RDI+ + Y+
Sbjct: 173 CIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKW 220
Query: 265 -APE-VLRRSYGKEIDVWSAGVILYILLS-GVPPF 296
APE + Y + DVWS G++L+ + S G+ P+
Sbjct: 221 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 128 LKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKII 187
LK KQ R D E IM N++ G V ++ E G L D +
Sbjct: 43 LKSGYTEKQ-RRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFL 99
Query: 188 AQ--GHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS 245
Q G +T + R I + + M +HR L N L+++ + K +DFGLS
Sbjct: 100 RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSN---LVCKVSDFGLS 156
Query: 246 VFIDEGK---VYRDIVGSAY---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFW 297
F+++ Y +G + APE ++ R + DVWS G++++ ++S G P+W
Sbjct: 157 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 216
Query: 298 AETEKGIFDAI 308
T + + +AI
Sbjct: 217 DMTNQDVINAI 227
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 65.5 bits (158), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 14/181 (7%)
Query: 365 IGSAVLSRMKQFRAMNKLKKMALKVIAEALS--EEEIKGLKTMFANMDTDKSGTITYEEL 422
I VL+ MK + + ++ + + ++A LS IK + +F +DT+ +G++++ E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 423 KTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFD 482
T LA +G K + ++ +++ A D++ G I Y EF+ A +R++ L AF D
Sbjct: 62 YTVLASVGIK--KWDINRILQALDINDRGNITYTEFM-AGCYRWKNIESTFLKAAFNKID 118
Query: 483 KDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTDNDG--------RINYEEFCTMMR 534
KD GYI++ ++ + + D + D I V + G +I+++EF M
Sbjct: 119 KDEDGYISKSDIVSLVHD-KVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYML 177
Query: 535 S 535
S
Sbjct: 178 S 178
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 29/215 (13%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSIL------KRKLVNKQDREDIKREIQIMQHLSG 153
K++G+G FG+ + + A KS++ + +++ K ++ +RE+ IM +L+
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK--FQEFQREVFIMSNLN- 81
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+ G + +VME G+L+ +++ + H + + R ++++ +
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEY 137
Query: 214 M-----GVMHRDLKPENFLLSNKDGGAML--KATDFGLSVFIDEGKVYR--DIVGSAYYV 264
M ++HRDL+ N L + D A + K DFGLS + V+ ++G+ ++
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQWM 193
Query: 265 APEVL---RRSYGKEIDVWSAGVILYILLSGVPPF 296
APE + SY ++ D +S +ILY +L+G PF
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQEALTM 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + + A+ L +
Sbjct: 66 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 39 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 93
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 94 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 153 IIHRDLKSNNIFLHED---LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 37 RERIELGRCIGEGQFGDVHQGIYMSPENP-ALAVAIKTC--KNCTSDSVREKFLQEALTM 93
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + + A+ L +
Sbjct: 94 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 208
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 12 RERIELGRCIGEGQFGDVHQGIYMSPENP-ALAVAIKTC--KNCTSDSVREKFLQEALTM 68
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + + A+ L +
Sbjct: 69 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 183
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 40/285 (14%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T +E+G GQFG+ +L + A K+I + ED E ++M LS
Sbjct: 11 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLS-HPK 64
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + LV E G L D + Q G + + +C + + +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
V+HRDL N L+ ++K +DFG++ F+ + + Y G+ + + +PEV S
Sbjct: 125 VIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 180
Query: 273 -YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLV 331
Y + DVWS GV+++ + S +G + +E+ S+ +D+
Sbjct: 181 RYSSKSDVWSFGVLMWEVFS------------------EGKIPYENRS---NSEVVEDIS 219
Query: 332 RKMLIQDPKKRITSA-EVLEHPWMREGGEASDKPIGSAVLSRMKQ 375
+ P+ T +++ H W RE E D+P S +L ++ +
Sbjct: 220 TGFRLYKPRLASTHVYQIMNHCW-RERPE--DRPAFSRLLRQLAE 261
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 11 RERIELGRCIGEGQFGDVHQGIYMSPENP-ALAVAIKTC--KNCTSDSVREKFLQEALTM 67
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + + A+ L +
Sbjct: 68 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 182
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 31 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 85
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 86 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 145 IIHRDLKSNNIFLHED---LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENP-ALAVAIKTC--KNCTSDSVREKFLQEALTM 70
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + + A+ L +
Sbjct: 71 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 185
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 52/244 (21%)
Query: 93 RQFYTLGKELGRGQFGITYLCTE---NSTGNSYACKSILKRKLVNKQDREDIKREIQIMQ 149
R+ GK LG G FG T + TG S + ++ + +RE + E+++M
Sbjct: 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT 103
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAA---------- 198
L +NIV GA ++L+ E C G+L + + ++ ++E
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 199 ----------ALCRA--IVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV 246
LC A + + F +HRDL N L+++ G ++K DFGL+
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH---GKVVKICDFGLA- 219
Query: 247 FIDEGKVYRDIVGSAYYV------------APEVLRRS-YGKEIDVWSAGVILYILLS-G 292
RDI+ + YV APE L Y + DVWS G++L+ + S G
Sbjct: 220 --------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271
Query: 293 VPPF 296
V P+
Sbjct: 272 VNPY 275
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 48/276 (17%)
Query: 70 SSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK 129
+S T P Q P + E R GK LG G FG T G A +
Sbjct: 25 NSYTFIDPTQLP---YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV 81
Query: 130 RKL---VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI 186
+ L + ++E + E++IM HL +NIV GA V ++ E C G+L + +
Sbjct: 82 KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
Query: 187 -----------IAQGHYTEKAAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSN 230
H E+ ++ L V F+ +HRD+ N LL+N
Sbjct: 142 RRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 201
Query: 231 KDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------APE-VLRRSYGKEI 277
G + K DFGL+ RDI+ + Y+ APE + Y +
Sbjct: 202 ---GHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 278 DVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
DVWS G++L+ + S G+ P+ F ++K G
Sbjct: 250 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 285
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 11 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + + +V + C G L+ + I + + + R + + H
Sbjct: 66 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 125 IIHRDLKSNNIFLHED---LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 65.1 bits (157), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
++++ K F D++++G IT E L+T L + G ++ ++ + AD GNG I +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 456 IEFISATMHRYRLERDEH-LYKAFQYFDKDNSGYITRDELETAMKDYGIGDEA---SIKE 511
EF+S R + E L +AF+ FD + +GYI + L+ A+ + +GD E
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLN--LGDRLKPHEFAE 119
Query: 512 IISEVDTDNDGRINYEEFCTMM 533
+ +T+ G+I Y+ F M
Sbjct: 120 FLGITETEK-GQIRYDNFINTM 140
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENP-ALAVAIKTC--KNCTSDSVREKFLQEALTM 62
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + + A+ L +
Sbjct: 63 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 177
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T+G+ +G G FG Y + A K +L Q + K E+ +++ + N
Sbjct: 11 TVGQRIGSGSFGTVY---KGKWHGDVAVK-MLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMG 215
I+ F G Y + +V + C G L+ + I + + + R + + H
Sbjct: 66 ILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE---GKVYRDIVGSAYYVAPEVLR-- 270
++HRDLK N L +K DFGL+ + + GS ++APEV+R
Sbjct: 125 IIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 271 --RSYGKEIDVWSAGVILYILLSGVPPF 296
Y + DV++ G++LY L++G P+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENP-ALAVAIKTC--KNCTSDSVREKFLQEALTM 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + + A+ L +
Sbjct: 66 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 91 DIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR-KLVNKQDREDIKREIQIMQ 149
D R G + G G FG+ Y N+T + A K + + ++ ++ +EI++
Sbjct: 19 DERPISVGGNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXA 76
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA-------QGHYTEKAAAALCR 202
+N+VE G D + LV G L D++ H K A
Sbjct: 77 KCQ-HENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAAN 135
Query: 203 AIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS----VFIDEGKVYRDIV 258
I N +H H + HRD+K N LL D K +DFGL+ F R IV
Sbjct: 136 GI-NFLHENHHI---HRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSR-IV 187
Query: 259 GSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGVP 294
G+ Y APE LR + D++S GV+L +++G+P
Sbjct: 188 GTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L EE+ + + F+ D + G + Y ELK + LG +L + E+ L+D D +G +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASI 509
Y +F M L+RD + + +AFQ FD D++G I+ L K+ G + DE +
Sbjct: 77 KYDDFY-IVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE-EL 134
Query: 510 KEIISEVDTDNDGRINYEEF---CT 531
+ +I E D D DG IN EF CT
Sbjct: 135 RAMIEEFDLDGDGEINENEFIAICT 159
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQQNI 157
K +G G+FG G C +I LK +KQ R D E IM NI
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFD-HPNI 92
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMG 215
+ G + V ++ E G L D + + G +T + R I + + + M
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY----------YVA 265
+HRDL N L+++ + K +DFG+S +V D +AY + A
Sbjct: 152 AVHRDLAARNILVNSN---LVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTA 202
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
PE + R + DVWS G++++ ++S G P+W + + + AI +G
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQEALTM 445
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + A+ L +
Sbjct: 446 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ Y+ G ++A
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L EE+ + + F+ D + G + Y ELK LG +L + E+ L+D D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASI 509
Y +F + L+RD + + +AFQ FD D++G I+ L K+ G + DE +
Sbjct: 77 KYDDFYIVXGEKI-LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE-EL 134
Query: 510 KEIISEVDTDNDGRINYEEF 529
+ I E D D DG IN EF
Sbjct: 135 RAXIEEFDLDGDGEINENEF 154
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L + + +K F D D +G I+ + L+ LG L++ E++ ++ D+DG+G I
Sbjct: 90 LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEI 149
Query: 454 DYIEFIS 460
+ EFI+
Sbjct: 150 NENEFIA 156
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T +E+G GQFG+ +L + + A K+I + +D E ++M LS
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIKE----GSMSEDDFIEEAEVMMKLS-HPK 83
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + LV E G L D + Q G + + +C + + +
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
V+HRDL N L+ ++K +DFG++ F+ + + Y G+ + + +PEV S
Sbjct: 144 VIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 199
Query: 273 -YGKEIDVWSAGVILYILLS 291
Y + DVWS GV+++ + S
Sbjct: 200 RYSSKSDVWSFGVLMWEVFS 219
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQ 154
T+ + +G G+FG G +I LK KQ R D E IM
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD-H 82
Query: 155 QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCH 212
NI+ G + V +V E G L D + + G +T + R I + +
Sbjct: 83 PNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 213 FMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---------- 262
MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 142 DMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPIR 192
Query: 263 YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ APE + R + DVWS G++++ ++S G P+W T + + A+ +G
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 51/289 (17%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQ------- 154
LG+G FG YA K I ++ I E+ ++ L+ Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 155 -----QNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAA-ALCRAIVNVV 208
+N V+ A + + ++ + E C L+D I ++ ++ L R I+ +
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI----------- 257
+ H G++HR+LKP N + D +K DFGL+ V+R +
Sbjct: 130 SYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLP 181
Query: 258 ---------VGSAYYVAPEVLRRS--YGKEIDVWSAGVILYILLSGVPPFWAETEK-GIF 305
+G+A YVA EVL + Y ++ID +S G+I + + PF E+ I
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNIL 238
Query: 306 DAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWM 354
+ ++F + K ++R ++ DP KR + +L W+
Sbjct: 239 KKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 17/226 (7%)
Query: 97 TLGKELGRGQFGITY---LCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSG 153
T K +G G+FG Y L T + LK KQ R D E IM S
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ-RVDFLGEAGIMGQFS- 104
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHC 211
NI+ G + + ++ E G L DK + + G ++ + R I + +
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 212 HFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDEGKVYRDIVGSAY---YVAPE 267
M +HRDL N L+++ + K +DFGLS V D+ + G + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 268 VLR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKG 311
+ R + DVWS G++++ ++ G P+W + + AI G
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQQNI 157
K +G G+FG G C +I LK +KQ R D E IM NI
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFD-HPNI 71
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMG 215
+ G + V ++ E G L D + + G +T + R I + + + M
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY----------YVA 265
+HRDL N L+++ + K +DFG+S +V D +AY + A
Sbjct: 131 YVHRDLAARNILVNSN---LVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
PE + R + DVWS G++++ ++S G P+W + + + AI +G
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSI--LKRKLVNKQDREDIKREIQIMQHLSGQQNI 157
K +G G+FG G C +I LK +KQ R D E IM NI
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFD-HPNI 77
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVHHCHFMG 215
+ G + V ++ E G L D + + G +T + R I + + + M
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 136
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY----------YVA 265
+HRDL N L+++ + K +DFG+S +V D +AY + A
Sbjct: 137 YVHRDLAARNILVNSN---LVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 266 PEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
PE + R + DVWS G++++ ++S G P+W + + + AI +G
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 33/232 (14%)
Query: 79 QKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTE----NSTGNSYACKSILKRKLVN 134
+KP T + P ++F ++LG G FG LC ++TG A KS+ N
Sbjct: 7 KKPATEV-DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN 65
Query: 135 KQDREDIKREIQIMQHLSGQQNIVEFRG-AYED-RQSVHLVMELCSGGELFDKIIAQGHY 192
D+K+EI+I+++L +NIV+++G ED + L+ME G L + + +
Sbjct: 66 HI--ADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK 122
Query: 193 TE-----KAAAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGL 244
K A +C+ + ++G +HRDL N L+ ++ +K DFGL
Sbjct: 123 INLKQQLKYAVQICKGM-------DYLGSRQYVHRDLAARNVLVESEH---QVKIGDFGL 172
Query: 245 SVFIDEGK----VYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS 291
+ I+ K V D ++ APE L +S + DVWS GV L+ LL+
Sbjct: 173 TKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGL G+V D +AY
Sbjct: 162 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGL------GRVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 162 YLSDMGAVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQEALTM 445
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + A+ L +
Sbjct: 446 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S D +K DFGLS ++++ Y+ G ++A
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQEALTM 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + A+ L +
Sbjct: 66 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S D +K DFGLS ++++ Y+ G ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 144/357 (40%), Gaps = 82/357 (22%)
Query: 69 KSSATSTRPVQ--KPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKS 126
+SS S+R V+ K ++ + + +++ Y + LG G FG C +++ G S
Sbjct: 1 QSSKRSSRSVEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALK 60
Query: 127 ILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDK 185
I++ V K RE + EI +++ + + +F D + H M C EL K
Sbjct: 61 IIRN--VGKY-REAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM--CIAFELLGK 115
Query: 186 ----IIAQGHY-------TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGG 234
+ + ++ A LC A+ + H + H DLKPEN L N +
Sbjct: 116 NTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL----HENQLTHTDLKPENILFVNSEFE 171
Query: 235 AM----------------LKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEI 277
+ ++ DFG + F E + IV + +Y PEV L + +
Sbjct: 172 TLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPC 229
Query: 278 DVWSAGVILYILLSGVPPFWAETEKG---IFDAIL------------------KGGVDFE 316
DVWS G IL+ G F + + + IL KGG+ ++
Sbjct: 230 DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 289
Query: 317 ------------SEPW--LLISDSAK-----DLVRKMLIQDPKKRITSAEVLEHPWM 354
+P ++ DS + DL+R+ML DP +RIT AE L HP+
Sbjct: 290 ENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 29/215 (13%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSIL------KRKLVNKQDREDIKREIQIMQHLSG 153
K++G+G FG+ + + A KS++ + +++ K ++ +RE+ IM +L+
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK--FQEFQREVFIMSNLN- 81
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+ G + +VME G+L+ +++ + H + + R ++++ +
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEY 137
Query: 214 M-----GVMHRDLKPENFLLSNKDGGAML--KATDFGLSVFIDEGKVYR--DIVGSAYYV 264
M ++HRDL+ N L + D A + K DFG S + V+ ++G+ ++
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGLLGNFQWM 193
Query: 265 APEVL---RRSYGKEIDVWSAGVILYILLSGVPPF 296
APE + SY ++ D +S +ILY +L+G PF
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 19/267 (7%)
Query: 89 LEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
+E R+ TL KELG GQFG+ L G ++K ++ +E Q M
Sbjct: 3 MELKREEITLLKELGSGQFGVVKL--GKWKGQYDVAVKMIKE---GSMSEDEFFQEAQTM 57
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAA-LCRAIVNV 207
LS +V+F G +++V E S G L + + + G E + +C +
Sbjct: 58 MKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YV 264
+ +HRDL N L+ D +K +DFG++ ++ + + Y VG+ + +
Sbjct: 117 MAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWS 172
Query: 265 APEVLRR-SYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLL 322
APEV Y + DVW+ G++++ + S G P+ T + + +G + L
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH---L 229
Query: 323 ISDSAKDLVRKMLIQDPKKRITSAEVL 349
SD+ ++ + P+KR T ++L
Sbjct: 230 ASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +G+G FG + A K I +K Q + ++ R +++M +
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMNKHDTEM 95
Query: 156 N--IVEFRGAYEDRQSVHLVMELCSGG--ELFDKIIAQG---HYTEKAAAALCRAIVNVV 208
IV + + R + LV E+ S +L +G + T K A +C A++ +
Sbjct: 96 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 155
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEV 268
+ ++H DLKPEN LL N A +K DFG S + + ++Y+ I S +Y +PEV
Sbjct: 156 --TPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQ-RIYQXI-QSRFYRSPEV 210
Query: 269 LR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE 301
L Y ID+WS G IL + +G P F E
Sbjct: 211 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +G+G FG + A K I +K Q + ++ R +++M +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMNKHDTEM 114
Query: 156 N--IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG------HYTEKAAAALCRAIVNV 207
IV + + R + LV E+ S L+D + + T K A +C A++ +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ ++H DLKPEN LL N A +K DFG S + + ++Y+ I S +Y +PE
Sbjct: 174 A--TPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQLGQ-RIYQXI-QSRFYRSPE 228
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE 301
VL Y ID+WS G IL + +G P F E
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 162 YLSDMGFVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 29/215 (13%)
Query: 100 KELGRGQFGITYLCTENSTGNSYACKSIL------KRKLVNKQDREDIKREIQIMQHLSG 153
K++G+G FG+ + + A KS++ + +++ K ++ +RE+ IM +L+
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK--FQEFQREVFIMSNLN- 81
Query: 154 QQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
NIV+ G + +VME G+L+ +++ + H + + R ++++ +
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEY 137
Query: 214 M-----GVMHRDLKPENFLLSNKDGGAML--KATDFGLSVFIDEGKVYR--DIVGSAYYV 264
M ++HRDL+ N L + D A + K DF LS + V+ ++G+ ++
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGLLGNFQWM 193
Query: 265 APEVL---RRSYGKEIDVWSAGVILYILLSGVPPF 296
APE + SY ++ D +S +ILY +L+G PF
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 38/288 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R LGK LGRG FG + C+++ + L + + E++I+
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 87
Query: 150 HLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGH----YTEKAAAALCRAI 204
H+ N+V GA + + +++E C G L + ++ + Y E A L +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE-APEDLYKDF 146
Query: 205 VNVVHH-CHFMGV------------MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFID 249
+ + H C+ V +HRDL N LLS K+ ++K DFGL+ ++ D
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKD 203
Query: 250 EGKVYR-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFD 306
V + D ++APE + R Y + DVWS GV+L+ + S G P+ F
Sbjct: 204 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 263
Query: 307 AILKGGVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
LK G + + + ++ + ML +P +R T +E++EH
Sbjct: 264 RRLKEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 162 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 19 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 74
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 75 D-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 133 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 183
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 162 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 162 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 19 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 74
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 75 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 133 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 183
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 162 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 162 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +G+G FG + A K I +K Q + ++ R +++M +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMNKHDTEM 114
Query: 156 N--IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG------HYTEKAAAALCRAIVNV 207
IV + + R + LV E+ S L+D + + T K A +C A++ +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYVAPE 267
+ ++H DLKPEN LL N A +K DFG S + + ++Y+ I S +Y +PE
Sbjct: 174 A--TPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSCQLGQ-RIYQXI-QSRFYRSPE 228
Query: 268 VLR-RSYGKEIDVWSAGVILYILLSGVPPFWAETE 301
VL Y ID+WS G IL + +G P F E
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 32/218 (14%)
Query: 93 RQFYTLGKELGRGQFGITYLCTE----NSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
++F ++LG G FG LC ++TG A KS+ N D+K+EI+I+
Sbjct: 8 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEIL 65
Query: 149 QHLSGQQNIVEFRG-AYED-RQSVHLVMELCSGGELFDKIIAQGHYTE-----KAAAALC 201
++L +NIV+++G ED + L+ME G L + + + K A +C
Sbjct: 66 RNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 124
Query: 202 RAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK----VY 254
+ + ++G +HRDL N L+ ++ +K DFGL+ I+ K V
Sbjct: 125 KGM-------DYLGSRQYVHRDLAARNVLVESEH---QVKIGDFGLTKAIETDKEXXTVK 174
Query: 255 RDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS 291
D ++ APE L +S + DVWS GV L+ LL+
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 46 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 101
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 102 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 159
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 160 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 210
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 36 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 91
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 92 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGLS +V D +AY
Sbjct: 150 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLS------RVLEDDPEAAYTTRGGKI 200
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 394 LSEEEIKGLKTMFANMDT-DKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGT 452
LS ++K L+T F + +T + SG ++ +++ L LG + +++ ++QL+D D GNG
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 453 IDYIEF--ISATMHRYRL---ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEA 507
ID+ F I A + + + L +AF+ +DK+ +GYI+ D + + + DE
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL---DET 123
Query: 508 ----SIKEIISEVDTDNDGRINYEEFCTMMRSG 536
+ +I E+D D G +++EEF +M G
Sbjct: 124 LSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 156
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 379 MNKLKKMALKVIAEALSEEEIKG-LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETE 437
+ K + + + E ++ E+++ L+ F D + +G I+ + ++ LA L LS +
Sbjct: 69 FDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSED 128
Query: 438 VKQLMDAADVDGNGTIDYIEFI 459
+ ++D D DG+GT+D+ EF+
Sbjct: 129 LDAMIDEIDADGSGTVDFEEFM 150
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR-LERDEHLYKAFQ 479
GTID+ EF++ + + + +E + +AF+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 105/267 (39%), Gaps = 55/267 (20%)
Query: 70 SSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILK 129
+S T P Q P + E R GK LG G FG T G A +
Sbjct: 10 NSYTFIDPTQLP---YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV 66
Query: 130 RKL---VNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI 186
+ L + ++E + E++IM HL +NIV GA V ++ E C G+L + +
Sbjct: 67 KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 126
Query: 187 -----------IAQGHYTEKAAAALCRAI---------VNVVHHCHFMG---VMHRDLKP 223
+A G E R + V F+ +HRD+
Sbjct: 127 RRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAA 186
Query: 224 ENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYYV------------APE-VLR 270
N LL+N G + K DFGL+ RDI+ + Y+ APE +
Sbjct: 187 RNVLLTN---GHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 271 RSYGKEIDVWSAGVILYILLS-GVPPF 296
Y + DVWS G++L+ + S G+ P+
Sbjct: 235 CVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R LGK LGRG FG + C+++ + L + + E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 150 HLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGHY---TEKAAAALCRAIV 205
H+ N+V GA + + +++E C G L + ++ + + A L + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 206 NVVHH-CHFMGV------------MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDE 250
+ H C+ V +HRDL N LLS K+ ++K DFGL+ ++ D
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDP 202
Query: 251 GKVYR-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDA 307
V + D ++APE + R Y + DVWS GV+L+ + S G P+ F
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 308 ILKGGVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
LK G + + + ++ + ML +P +R T +E++EH
Sbjct: 263 RLKEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ G ++K ++ E ++M +LS +
Sbjct: 27 TFLKELGTGQFGVVKY--GKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLS-HEK 80
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + ++ E + G L + + H + + +C+ + + +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
+HRDL N L++++ ++K +DFGLS ++ + + Y VGS + + PEVL S
Sbjct: 141 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 196
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPF 296
+ + D+W+ GV+++ + S G P+
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
+ +++G G FG + + G+ A K IL + + + + RE+ IM+ L N
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH--GSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLR-HPN 95
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELF---DKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
IV F GA ++ +V E S G L+ K A+ E+ ++ + +++ H
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 214 MG--VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY-RDIVGSAYYVAPEVLR 270
++HRDLK N L+ K +K DFGLS + + G+ ++APEVLR
Sbjct: 156 RNPPIVHRDLKSPNLLVDKK---YTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 271 RSYGKE-IDVWSAGVILYILLSGVPPF 296
E DV+S GVIL+ L + P+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNI 157
L +G G FG Y + A K ILK + + + E+ +++ + NI
Sbjct: 40 LSTRIGSGSFGTVY---KGKWHGDVAVK-ILKVVDPTPEQFQAFRNEVAVLRK-TRHVNI 94
Query: 158 VEFRGAYEDRQSVHLVMELCSGGELFDKI-IAQGHYTEKAAAALCRAIVNVVHHCHFMGV 216
+ F G Y + ++ +V + C G L+ + + + + + R + + H +
Sbjct: 95 LLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 217 MHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDI---VGSAYYVAPEVLR--- 270
+HRD+K N L G +K DFGL+ + + GS ++APEV+R
Sbjct: 154 IHRDMKSNNIFLHE---GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 271 -RSYGKEIDVWSAGVILYILLSGVPPF 296
+ + DV+S G++LY L++G P+
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 131/332 (39%), Gaps = 80/332 (24%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
+++ Y + LG G FG C +++ G S I++ V K RE + EI +++ +
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN--VGKY-REAARLEINVLKKI 73
Query: 152 SGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDK----IIAQGHY-------TEKAAAA 199
+ +F D + H M C EL K + + ++ A
Sbjct: 74 KEKDKENKFLCVLMSDWFNFHGHM--CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 131
Query: 200 LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAM----------------LKATDFG 243
LC A+ + H + H DLKPEN L N + + ++ DFG
Sbjct: 132 LCHALRFL----HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187
Query: 244 LSVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEK 302
+ F E + IV + +Y PEV L + + DVWS G IL+ G F +
Sbjct: 188 SATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245
Query: 303 G---IFDAIL------------------KGGVDFE------------SEPW--LLISDSA 327
+ + IL KGG+ ++ +P ++ DS
Sbjct: 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305
Query: 328 K-----DLVRKMLIQDPKKRITSAEVLEHPWM 354
+ DL+R+ML DP +RIT AE L HP+
Sbjct: 306 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R LGK LGRG FG + C+++ + L + + E++I+
Sbjct: 27 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 86
Query: 150 HLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGH--YTEKAAAALCRAIVN 206
H+ N+V GA + + +++E C G L + ++ + K L + +
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 207 VVHH-CHFMGV------------MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEG 251
+ H C+ V +HRDL N LLS K+ ++K DFGL+ + D
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIXKDPD 203
Query: 252 KVYR-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308
V + D ++APE + R Y + DVWS GV+L+ + S G P+ F
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 263
Query: 309 LKGGVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
LK G + + + ++ + ML +P +R T +E++EH
Sbjct: 264 LKEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 97 TLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
++ K +G G+FG +C+ + S A K+ LK KQ R D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKT-LKVGYTEKQ-RRDFLGEASIMGQF 103
Query: 152 SGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIVNVVH 209
NI+ G + V +V E G L D + + +T + R I + +
Sbjct: 104 D-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 210 HCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY------- 262
+ MG +HRDL N L+++ + K +DFGL+ +V D +AY
Sbjct: 162 YLSDMGYVHRDLAARNILINSN---LVCKVSDFGLA------RVLEDDPEAAYTTRGGKI 212
Query: 263 ---YVAPEVLR-RSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ +PE + R + DVWS G++L+ ++S G P+W + + + A+ +G
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y++ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQ 154
LGK LGRG FG + C+++ + L + + E++I+ H+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 155 QNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGHY---TEKAAAALCRAIVNVVHH 210
N+V GA + + +++E C G L + ++ + + A L + + + H
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 211 -CHFMGV------------MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYR 255
C+ V +HRDL N LLS K+ ++K DFGL+ ++ D V +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRK 207
Query: 256 -DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
D ++APE + R Y + DVWS GV+L+ + S G P+ F LK G
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 313 VDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
+ + + ++ + ML +P +R T +E++EH
Sbjct: 268 TRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 93 RQFYTLGKELGRGQFGIT----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIM 148
R+ LG+ +G GQFG Y+ EN + A K+ + + RE +E M
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQEALTM 65
Query: 149 QHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAAL-CRAIVNV 207
+ +IV+ G + V ++MELC+ GEL + + + A+ L +
Sbjct: 66 RQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 208 VHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGS--AYYVA 265
+ + +HRD+ N L+S+ D +K DFGLS ++++ + G ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMA 180
Query: 266 PEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPF 296
PE + R + DVW GV ++ IL+ GV PF
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ G ++K ++ E ++M +LS +
Sbjct: 18 TFLKELGTGQFGVVKY--GKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLS-HEK 71
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + ++ E + G L + + H + + +C+ + + +
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
+HRDL N L++++ ++K +DFGLS ++ + + Y VGS + + PEVL S
Sbjct: 132 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 187
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPF 296
+ + D+W+ GV+++ + S G P+
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ G ++K ++ E ++M +LS +
Sbjct: 11 TFLKELGTGQFGVVKY--GKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLS-HEK 64
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + ++ E + G L + + H + + +C+ + + +
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
+HRDL N L++++ ++K +DFGLS ++ + + Y VGS + + PEVL S
Sbjct: 125 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 180
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPF 296
+ + D+W+ GV+++ + S G P+
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 38/283 (13%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQ 154
LGK LGRG FG + C+++ + L + + E++I+ H+
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 155 QNIVEFRGAY-EDRQSVHLVMELCSGGELFD------------KIIAQGHYTE--KAAAA 199
N+V GA + + +++E C G L K+ + Y +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 200 LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVY 254
+C + V F+ +HRDL N LLS K+ ++K DFGL+ ++ D V
Sbjct: 188 ICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVR 243
Query: 255 R-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ D ++APE + R Y + DVWS GV+L+ + S G P+ F LK
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 303
Query: 312 GVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
G + + + ++ + ML +P +R T +E++EH
Sbjct: 304 GTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ G ++K ++ E ++M +LS +
Sbjct: 7 TFLKELGTGQFGVVKY--GKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLS-HEK 60
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + ++ E + G L + + H + + +C+ + + +
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
+HRDL N L++++ ++K +DFGLS ++ + + Y VGS + + PEVL S
Sbjct: 121 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 176
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPF 296
+ + D+W+ GV+++ + S G P+
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ G ++K ++ E ++M +LS +
Sbjct: 12 TFLKELGTGQFGVVKY--GKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLS-HEK 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + ++ E + G L + + H + + +C+ + + +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
+HRDL N L++++ ++K +DFGLS ++ + + Y VGS + + PEVL S
Sbjct: 126 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 181
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPF 296
+ + D+W+ GV+++ + S G P+
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 36/244 (14%)
Query: 130 RKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI--- 186
++ +K D D E++++ L NI+ GA E R ++L +E G L D +
Sbjct: 61 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS 120
Query: 187 ----------IAQGHYTEKAAAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDG 233
IA + ++ L +V ++ +HRDL N L+
Sbjct: 121 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--- 177
Query: 234 GAMLKATDFGLS----VFIDE--GKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVIL 286
+ K DFGLS V++ + G++ ++A E L S Y DVWS GV+L
Sbjct: 178 NYVAKIADFGLSRGQEVYVKKTMGRL------PVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 287 YILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
+ ++S G P+ T +++ + +G + E L D DL+R+ + P +R +
Sbjct: 232 WEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSF 288
Query: 346 AEVL 349
A++L
Sbjct: 289 AQIL 292
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 134 NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA--QGH 191
++ R D E IM NI+ G + +V E G L D + G
Sbjct: 90 TERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQ 147
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI--D 249
+T + R + + + +G +HRDL N L+ D + K +DFGLS + D
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDD 204
Query: 250 EGKVYRDIVGSA--YYVAPEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y G + APE + R++ DVWS GV+++ +L G P+W T + +
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 306 DAILKG 311
++ +G
Sbjct: 265 SSVEEG 270
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 134 NKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIA--QGH 191
++ R D E IM NI+ G + +V E G L D + G
Sbjct: 90 TERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQ 147
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLS-VFIDE 250
+T + R + + + +G +HRDL N L+ D + K +DFGLS V D+
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDD 204
Query: 251 GKVYRDIVGSAY---YVAPEVLR-RSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
G + APE + R++ DVWS GV+++ +L G P+W T + +
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 306 DAILKG 311
++ +G
Sbjct: 265 SSVEEG 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
+ +++G G FG + + G+ A K IL + + + + RE+ IM+ L N
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH--GSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLR-HPN 95
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELF---DKIIAQGHYTEKAAAALCRAIVNVVHHCHF 213
IV F GA ++ +V E S G L+ K A+ E+ ++ + +++ H
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 214 MG--VMHRDLKPENFLLSNKDGGAMLKATDFGL-----SVFIDEGKVYRDIVGSAYYVAP 266
++HR+LK N L+ K +K DFGL S F+ + G+ ++AP
Sbjct: 156 RNPPIVHRNLKSPNLLVDKK---YTVKVCDFGLSRLKASTFLSS----KSAAGTPEWMAP 208
Query: 267 EVLRRSYGKE-IDVWSAGVILYILLSGVPPF 296
EVLR E DV+S GVIL+ L + P+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 36/282 (12%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQ 154
LGK LGRG FG + C+++ + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 155 QNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGHY---TEKAAAALCRAIVNVVHH 210
N+V GA + + ++ E C G L + ++ + + A L + + + H
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 211 -CHFMGV------------MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYR 255
C+ V +HRDL N LLS K+ ++K DFGL+ ++ D V +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRK 198
Query: 256 -DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
D ++APE + R Y + DVWS GV+L+ + S G P+ F LK G
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 313 VDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
+ + + ++ + ML +P +R T +E++EH
Sbjct: 259 TRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 36/244 (14%)
Query: 130 RKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI--- 186
++ +K D D E++++ L NI+ GA E R ++L +E G L D +
Sbjct: 51 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS 110
Query: 187 ----------IAQGHYTEKAAAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDG 233
IA + ++ L +V ++ +HRDL N L+
Sbjct: 111 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--- 167
Query: 234 GAMLKATDFGLS----VFIDE--GKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVIL 286
+ K DFGLS V++ + G++ ++A E L S Y DVWS GV+L
Sbjct: 168 NYVAKIADFGLSRGQEVYVKKTMGRL------PVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 287 YILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
+ ++S G P+ T +++ + +G + E L D DL+R+ + P +R +
Sbjct: 222 WEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSF 278
Query: 346 AEVL 349
A++L
Sbjct: 279 AQIL 282
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR 467
GTID+ EF++ + +
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 36/282 (12%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQ 154
LGK LGRG FG + C+++ + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 155 QNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGHY---TEKAAAALCRAIVNVVHH 210
N+V GA + + ++ E C G L + ++ + + A L + + + H
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 211 -CHFMGV------------MHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVYR 255
C+ V +HRDL N LLS K+ ++K DFGL+ ++ D V +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRK 198
Query: 256 -DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
D ++APE + R Y + DVWS GV+L+ + S G P+ F LK G
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 313 VDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
+ + + ++ + ML +P +R T +E++EH
Sbjct: 259 TRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+ + ++ F D D +GTI +ELK LG + + E+K+ + D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 454 DYIEFISATMHRYRLERD--EHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASI 509
++ +F++ + E+D E + KAF+ FD D +G I+ L+ K+ G + DE +
Sbjct: 85 NFGDFLTVXTQKXS-EKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDE-EL 142
Query: 510 KEIISEVDTDNDGRINYEEFCTMMR 534
+E I E D D DG ++ +EF + +
Sbjct: 143 QEXIDEADRDGDGEVSEQEFLRIXK 167
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 387 LKVIAEALSEEEIKG-LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAA 445
L V + SE++ K + F D D++G I+++ LK LG L++ E+++ +D A
Sbjct: 90 LTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEA 149
Query: 446 DVDGNGTIDYIEFI 459
D DG+G + EF+
Sbjct: 150 DRDGDGEVSEQEFL 163
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR 467
GTID+ EF++ + +
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFISATMHRYR 467
GTID+ EF++ + +
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 38/288 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R LGK LGRG FG + C+++ + L + + E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 150 HLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFD------------KIIAQGHYTE-- 194
H+ N+V GA + + +++E C G L K+ + Y +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 195 KAAAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFID 249
+C + V F+ +HRDL N LLS K+ ++K DFGL+ + D
Sbjct: 146 TLEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIXKD 201
Query: 250 EGKVYR-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFD 306
V + D ++APE + R Y + DVWS GV+L+ + S G P+ F
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 307 AILKGGVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
LK G + + + ++ + ML +P +R T +E++EH
Sbjct: 262 RRLKEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFIS 460
GTID+ EF++
Sbjct: 61 GTIDFPEFLT 70
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 451 GTIDYIEFIS 460
GTID+ EF++
Sbjct: 62 GTIDFPEFLT 71
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 532 MM 533
MM
Sbjct: 72 MM 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFIS 460
GTID+ EF++
Sbjct: 61 GTIDFPEFLT 70
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 128/331 (38%), Gaps = 78/331 (23%)
Query: 92 IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHL 151
+++ Y + LG G FG C ++ G + I+K ++ +E + EI +++ +
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNV---EKYKEAARLEINVLEKI 87
Query: 152 S-----GQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG------HYTEKAAAAL 200
+ + V+ ++ + + EL G FD + H A L
Sbjct: 88 NEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQL 146
Query: 201 CRAIVNVVHHCHFMGVMHRDLKPENFLLSNKD----------------GGAMLKATDFGL 244
C+A V H + H DLKPEN L N D ++ DFG
Sbjct: 147 CQA----VKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGS 202
Query: 245 SVFIDEGKVYRDIVGSAYYVAPEV-LRRSYGKEIDVWSAGVILYILLSGVPPFWAETEK- 302
+ F E + IV + +Y APEV L + + DVWS G I++ G F +
Sbjct: 203 ATFDHEH--HSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRE 260
Query: 303 --GIFDAIL------------------KGGVDFE------------SEPW--LLISDSAK 328
+ + IL +G +D++ +P L S++ +
Sbjct: 261 HLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEE 320
Query: 329 -----DLVRKMLIQDPKKRITSAEVLEHPWM 354
DL+ ML +P KR+T E L+HP+
Sbjct: 321 HHQLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 39/288 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R + GK LG G FG T S A ++ + L + +RE + E++++
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAI--- 204
+L NIV GA ++ E C G+L + + + K + A+
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 205 ----------VNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
V F+ +HRDL N LL++ G + K DFGL+ I
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GRITKICDFGLARHIKND 221
Query: 252 KVYRDIVGSAY----YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305
Y + G+A ++APE + Y E DVWS G+ L+ L S G P+ F
Sbjct: 222 SNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 280
Query: 306 DAILKGGVDF---ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
++K G E P D+++ DP KR T ++++
Sbjct: 281 YKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 139
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 256
Query: 252 KVYRDIVG---SAYYVAPEVL-RRSYGKEIDVWSAGVILY--ILLSGVP 294
Y+ ++APE L R Y + DVWS GV+++ L G P
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 38/283 (13%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQ 154
LGK LGRG FG + C+++ + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 155 QNIVEFRGAY-EDRQSVHLVMELCSGGELFD------------KIIAQGHYTE--KAAAA 199
N+V GA + + +++E C G L K+ + Y +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 200 LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVY 254
+C + V F+ +HRDL N LLS K+ ++K DFGL+ + D V
Sbjct: 142 ICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIXKDPDXVR 197
Query: 255 R-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ D ++APE + R Y + DVWS GV+L+ + S G P+ F LK
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 312 GVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
G + + + ++ + ML +P +R T +E++EH
Sbjct: 258 GTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 26 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 85
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 202
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 117/286 (40%), Gaps = 38/286 (13%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y ++LG G F L G+ YA K IL + +QDRE+ +RE M L
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREAD-MHRLFNHP 86
Query: 156 NIVEF-------RGAYEDRQSVHLVMELCSGGELFDKI---IAQGHY-TEKAAAALCRAI 204
NI+ RGA + L++ G L+++I +G++ TE L I
Sbjct: 87 NILRLVAYCLRERGA---KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 205 VNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK----VYRDIVG- 259
+ H G HRDLKP N LL ++ ++ + EG +D
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 260 --SAYYVAPEVLRRS----YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAI-LKGG 312
+ Y APE+ + DVWS G +LY ++ G P+ +KG A+ ++
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263
Query: 313 VDFESEPWLLISDSAKDLVRKMLIQDPKKR------ITSAEVLEHP 352
+ P S + L+ M+ DP +R ++ E L+ P
Sbjct: 264 LSIPQSP--RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 23 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 82
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 199
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 135/352 (38%), Gaps = 100/352 (28%)
Query: 96 YTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQ 155
Y + +GRG +G YL + + + A K + R + D + I REI I+ L
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSDY 88
Query: 156 NIVEFRGAY--EDR---QSVHLVMELCSGG--ELFDKIIAQGHYTEKAAAALCRAIVNVV 208
I+ ED +++V+E+ +LF I TE+ + ++
Sbjct: 89 -IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNLLLGE 144
Query: 209 HHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK---VYRDI-------- 257
H G++HRDLKP N LL N+D +K DFGL+ I+ K + D+
Sbjct: 145 KFIHESGIIHRDLKPANCLL-NQDCS--VKICDFGLARTINSDKDIHIVNDLEEKEENEE 201
Query: 258 ---------------VGSAYYVAPE--VLRRSYGKEIDVWSAGVILYILLS--------- 291
V + +Y APE +L+ +Y ID+WS G I LL+
Sbjct: 202 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNP 261
Query: 292 ----------------------------------------GVPP---FWAETEKGIFDAI 308
G PP T++ + I
Sbjct: 262 TNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYI 321
Query: 309 ----LKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLEHPWMRE 356
+ G+D S+ + IS DL+ ML + +KRIT + L HP++++
Sbjct: 322 KLFPTRDGIDL-SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLCT-----ENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 21 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 80
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENN---VMKIADFGLARDINNI 197
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR--EIQIMQHLSGQQNIVE 159
LGRG FG + + TG A K + R ++ R E+ LS + IV
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV----------RLEVFRVEELVACAGLSSPR-IVP 128
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
GA + V++ MEL GG L I G E A + + + H ++H
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV------GSAYYVAPE-VLRRS 272
D+K +N LLS+ A L DFG ++ + + + ++ G+ ++APE V+ +
Sbjct: 189 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKG 303
++D+WS+ ++ +L+G P W + +G
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHP-WTQYFRG 276
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + +++ DFGL+ I+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMRIADFGLARDINNI 210
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 119/283 (42%), Gaps = 38/283 (13%)
Query: 98 LGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQHLSGQ 154
LGK LGRG FG + C+++ + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 155 QNIVEFRGAY-EDRQSVHLVMELCSGGELFD------------KIIAQGHYTE--KAAAA 199
N+V GA + + ++ E C G L K+ + Y +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 200 LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGKVY 254
+C + V F+ +HRDL N LLS K+ ++K DFGL+ + D V
Sbjct: 142 ICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIXKDPDXVR 197
Query: 255 R-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKG 311
+ D ++APE + R Y + DVWS GV+L+ + S G P+ F LK
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 312 GVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
G + + + ++ + ML +P +R T +E++EH
Sbjct: 258 GTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 23/281 (8%)
Query: 73 TSTRPVQKPETV-LGKPLEDI-RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
T+ P KP+T L K +I R+ L +LG+G FG ++ T N T + +K
Sbjct: 162 TNVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-----TRVAIKT 216
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ- 189
E +E Q+M+ L ++ + + A + +++V E S G L D + +
Sbjct: 217 LKPGNMSPEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGEM 274
Query: 190 GHYTEKAAAA-LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
G Y + I + + + M +HRDL+ N L+ + K DFGL I
Sbjct: 275 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLGRLI 331
Query: 249 DEGKVYRDIVGSAY---YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
++ + Y G+ + + APE L + + DVWS G++L L + G P+ +
Sbjct: 332 EDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 390
Query: 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT 344
+ D + + G P +S DL+ + +DP++R T
Sbjct: 391 VLDQVER-GYRMPCPP--ECPESLHDLMCQCWRKDPEERPT 428
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 85
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEE 145
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 202
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 306 DAILKG 311
+ +G
Sbjct: 263 KLLKEG 268
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 85
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 145
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 202
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 306 DAILKG 311
+ +G
Sbjct: 263 KLLKEG 268
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 16 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 74
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 75 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 134
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 135 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 191
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 192 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
Query: 306 DAILKG 311
+ +G
Sbjct: 252 KLLKEG 257
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 23/281 (8%)
Query: 73 TSTRPVQKPETV-LGKPLEDI-RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
T+ P KP+T L K +I R+ L +LG+G FG ++ T N T + +K
Sbjct: 244 TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-----TRVAIKT 298
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ- 189
E +E Q+M+ L ++ + + A + +++V E S G L D + +
Sbjct: 299 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGET 356
Query: 190 GHYTE-KAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
G Y + I + + + M +HRDL+ N L+ + K DFGL+ I
Sbjct: 357 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLI 413
Query: 249 DEGKVYRDIVGSAY---YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
++ + Y G+ + + APE L + + DVWS G++L L + G P+ +
Sbjct: 414 EDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472
Query: 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT 344
+ D + + G P +S DL+ + ++P++R T
Sbjct: 473 VLDQVER-GYRMPCPP--ECPESLHDLMCQCWRKEPEERPT 510
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 30 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 89
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 90 KLN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 145
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 19 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 77
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 78 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 137
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 138 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 194
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 195 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
Query: 306 DAILKG 311
+ +G
Sbjct: 255 KLLKEG 260
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 20 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 78
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 79 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 138
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 139 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 195
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 196 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
Query: 306 DAILKG 311
+ +G
Sbjct: 256 KLLKEG 261
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 113/278 (40%), Gaps = 51/278 (18%)
Query: 69 KSSATSTRPVQKPETVLGKPLEDI-RQFYTLGKELGRGQFGITYL--CTENSTGNSYACK 125
K S ++ P+ + I R+ L ELG G FG +L C
Sbjct: 15 KGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLV 74
Query: 126 SILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD- 184
++ K ++ R+D +RE +++ L Q+IV F G + + + +V E G+L
Sbjct: 75 AVKALKEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 185 --------KIIAQGHYTEK---------AAAALCRAIVNVVHHCHFMGVMHRDLKPENFL 227
K++A G A A+ A + + HF+ HRDL N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFV---HRDLATRNCL 190
Query: 228 LSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAYY------------VAPE-VLRRSYG 274
+ G ++K DFG+S RDI + YY + PE +L R +
Sbjct: 191 VGQ---GLVVKIGDFGMS---------RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238
Query: 275 KEIDVWSAGVILY-ILLSGVPPFWAETEKGIFDAILKG 311
E DVWS GV+L+ I G P++ + D I +G
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 276
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 39/288 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R + GK LG G FG T S A ++ + L + +RE + E++++
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAI--- 204
+L NIV GA ++ E C G+L + + + K + A+
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 205 ----------VNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
V F+ +HRDL N LL++ G + K DFGL+ I
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GRITKICDFGLARDIKND 221
Query: 252 KVYRDIVGSAY----YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305
Y + G+A ++APE + Y E DVWS G+ L+ L S G P+ F
Sbjct: 222 SNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 280
Query: 306 DAILKGGVDF---ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
++K G E P D+++ DP KR T ++++
Sbjct: 281 YKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 39/288 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R + GK LG G FG T S A ++ + L + +RE + E++++
Sbjct: 38 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 97
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIV-- 205
+L NIV GA ++ E C G+L + + + K + A+
Sbjct: 98 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 206 -----------NVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
V F+ +HRDL N LL++ G + K DFGL+ I
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GRITKICDFGLARDIKND 214
Query: 252 KVYRDIVGSAY----YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305
Y + G+A ++APE + Y E DVWS G+ L+ L S G P+ F
Sbjct: 215 SNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 273
Query: 306 DAILKGGVDF---ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
++K G E P D+++ DP KR T ++++
Sbjct: 274 YKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 176 LCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGA 235
L +G +L + QG A A+ R I + + H G HRD+KPEN L+S D
Sbjct: 115 LINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAY 174
Query: 236 MLKATDFGLSVFIDEGKVYR--DIVGSAYYVAPEVLRRSYGK-EIDVWSAGVILYILLSG 292
++ DFG++ + K+ + + VG+ YY APE S+ D+++ +LY L+G
Sbjct: 175 LV---DFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
Query: 293 VPPFWAE 299
PP+ +
Sbjct: 232 SPPYQGD 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 39/288 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R + GK LG G FG T S A ++ + L + +RE + E++++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 81
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIV-- 205
+L NIV GA ++ E C G+L + + + K + A+
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 206 -----------NVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
V F+ +HRDL N LL++ G + K DFGL+ I
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GRITKICDFGLARDIKND 198
Query: 252 KVYRDIVGSAY----YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305
Y + G+A ++APE + Y E DVWS G+ L+ L S G P+ F
Sbjct: 199 SNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257
Query: 306 DAILKGGVDF---ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
++K G E P D+++ DP KR T ++++
Sbjct: 258 YKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 70
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 71 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE 130
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 187
Query: 251 GKVYRDIVG---SAYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 188 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
Query: 306 DAILKG 311
+ +G
Sbjct: 248 KLLKEG 253
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 85
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE 145
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 202
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 306 DAILKG 311
+ +G
Sbjct: 263 KLLKEG 268
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 93 RQFYTLGKELGRGQFGIT-----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R LGK LGRG FG + + +T + A K +LK + + R + E++I
Sbjct: 26 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRA-LMSELKI 83
Query: 148 MQHLSGQQNIVEFRGA-YEDRQSVHLVMELCSGGELFDKIIAQGH----YTE--KAAAAL 200
+ H+ N+V GA + + +++E C G L + ++ + Y + K L
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 201 CRAI---VNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEGK 252
I V F+ +HRDL N LLS K+ ++K DFGL+ ++ D
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN---VVKIXDFGLARDIYKDPDY 200
Query: 253 VYR-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAIL 309
V + D ++APE + R Y + DVWS GV+L+ + S G P+ F L
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL 260
Query: 310 KGGVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
K G + + + ++ + ML +P +R T +E++EH
Sbjct: 261 KEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 126
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDE 250
++ L V ++ +HRDL N L++ + ++K DFGL+ I
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 243
Query: 251 GKVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
Y+ ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
Query: 306 DAILKG 311
+ +G
Sbjct: 304 KLLKEG 309
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 105/253 (41%), Gaps = 50/253 (19%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
R+ L ELG G FG +L C ++ K ++ R+D +RE +++
Sbjct: 11 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM 70
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD---------KIIAQGHYTEK------ 195
L Q+IV F G + + + +V E G+L K++A G
Sbjct: 71 LQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 196 ---AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
A A+ A + + HF+ HRDL N L+ G ++K DFG+S
Sbjct: 130 QLLAVASQVAAGMVYLAGLHFV---HRDLATRNCLVGQ---GLVVKIGDFGMS------- 176
Query: 253 VYRDIVGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY-ILLSGVPPFWA 298
RDI + YY + PE +L R + E DVWS GV+L+ I G P++
Sbjct: 177 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 234
Query: 299 ETEKGIFDAILKG 311
+ D I +G
Sbjct: 235 LSNTEAIDCITQG 247
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 136/372 (36%), Gaps = 101/372 (27%)
Query: 80 KPETVLGKPLED--IRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQD 137
KP + +P D I Y + +G G +G + A K IL R + D
Sbjct: 37 KPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-RVFEDLID 95
Query: 138 REDIKREIQIMQHLSGQQNI----VEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHY- 192
+ I REI I+ L+ + + E +++V+E+ F K+ Y
Sbjct: 96 CKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYL 153
Query: 193 TEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID--- 249
TE L ++ V + H G++HRDLKP N L+ N+D +K DFGL+ +D
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV-NQDCS--VKVCDFGLARTVDYPE 210
Query: 250 ----------------------EGKVYRDIVG---SAYYVAPEV--LRRSYGKEIDVWSA 282
+ R + G + +Y APE+ L+ +Y + IDVWS
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270
Query: 283 GVILYILLSGVP----------PFWAETEKGIFDAILKGGVDF----------------- 315
G I LL+ + P + + K G DF
Sbjct: 271 GCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNI 330
Query: 316 -----ESEPWLLISDSAKDLVR--------------------------KMLIQDPKKRIT 344
E + L + AK +R +ML+ +P KRIT
Sbjct: 331 LGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRIT 390
Query: 345 SAEVLEHPWMRE 356
E L HP+ +E
Sbjct: 391 INECLAHPFFKE 402
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 36/244 (14%)
Query: 130 RKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI--- 186
++ +K D D E++++ L NI+ GA E R ++L +E G L D +
Sbjct: 58 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS 117
Query: 187 ----------IAQGHYTEKAAAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDG 233
IA + ++ L +V ++ +HR+L N L+
Sbjct: 118 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGE--- 174
Query: 234 GAMLKATDFGLS----VFIDE--GKVYRDIVGSAYYVAPEVLRRS-YGKEIDVWSAGVIL 286
+ K DFGLS V++ + G++ ++A E L S Y DVWS GV+L
Sbjct: 175 NYVAKIADFGLSRGQEVYVKKTMGRL------PVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 287 YILLS-GVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITS 345
+ ++S G P+ T +++ + +G + E L D DL+R+ + P +R +
Sbjct: 229 WEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSF 285
Query: 346 AEVL 349
A++L
Sbjct: 286 AQIL 289
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 105/253 (41%), Gaps = 50/253 (19%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
R+ L ELG G FG +L C ++ K ++ R+D +RE +++
Sbjct: 17 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM 76
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFD---------KIIAQGHYTEK------ 195
L Q+IV F G + + + +V E G+L K++A G
Sbjct: 77 LQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 196 ---AAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGK 252
A A+ A + + HF+ HRDL N L+ G ++K DFG+S
Sbjct: 136 QLLAVASQVAAGMVYLAGLHFV---HRDLATRNCLVGQ---GLVVKIGDFGMS------- 182
Query: 253 VYRDIVGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY-ILLSGVPPFWA 298
RDI + YY + PE +L R + E DVWS GV+L+ I G P++
Sbjct: 183 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 240
Query: 299 ETEKGIFDAILKG 311
+ D I +G
Sbjct: 241 LSNTEAIDCITQG 253
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 88
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G ++MEL +GG+L + + ++L A+++++H
Sbjct: 89 KFN-HQNIVRCIGVSLQSLPRFILMELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 144
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 262
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 39/288 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R + GK LG G FG T S A ++ + L + +RE + E++++
Sbjct: 40 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 99
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ--GHYTEKAAAALCRAIV-- 205
+L NIV GA ++ E C G+L + + + K + A+
Sbjct: 100 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 206 -----------NVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
V F+ +HRDL N LL++ G + K DFGL+ I
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH---GRITKICDFGLARDIKND 216
Query: 252 KVYRDIVGSAY----YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIF 305
Y + G+A ++APE + Y E DVWS G+ L+ L S G P+ F
Sbjct: 217 SNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 275
Query: 306 DAILKGGVDF---ESEPWLLISDSAKDLVRKMLIQDPKKRITSAEVLE 350
++K G E P D+++ DP KR T ++++
Sbjct: 276 YKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 44 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 103
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
L+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 104 KLN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 159
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 277
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 44 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 103
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G ++MEL +GG+L + + ++L A+++++H
Sbjct: 104 KFN-HQNIVRCIGVSLQSLPRFILMELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 159
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 277
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ G ++K ++ E ++M +LS +
Sbjct: 12 TFLKELGTGQFGVVKY--GKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLS-HEK 65
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + ++ E + G L + + H + + +C+ + + +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
+HRDL N L++++ ++K +DFGLS ++ + + Y GS + + PEVL S
Sbjct: 126 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYS 181
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPF 296
+ + D+W+ GV+++ + S G P+
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 97 TLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQN 156
T KELG GQFG+ G ++K ++ E ++M +LS +
Sbjct: 27 TFLKELGTGQFGVVKY--GKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLS-HEK 80
Query: 157 IVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGH-YTEKAAAALCRAIVNVVHHCHFMG 215
+V+ G ++ + ++ E + G L + + H + + +C+ + + +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 216 VMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY---YVAPEVLRRS 272
+HRDL N L++++ ++K +DFGLS ++ + + VGS + + PEVL S
Sbjct: 141 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSPPEVLMYS 196
Query: 273 -YGKEIDVWSAGVILYILLS-GVPPF 296
+ + D+W+ GV+++ + S G P+
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 452 TIDYIEFIS 460
TID+ EF++
Sbjct: 62 TIDFPEFLT 70
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 58/258 (22%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
R L +ELG G FG +L C ++ K + R+D RE +++ +
Sbjct: 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN 71
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQG-------------------- 190
L ++IV+F G + + +V E G+L + A G
Sbjct: 72 LQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 191 -HYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFID 249
H ++ AA + HF+ HRDL N L+ ++K DFG+S
Sbjct: 131 LHIAQQIAAGMVYLASQ-----HFV---HRDLATRNCLVGEN---LLVKIGDFGMS---- 175
Query: 250 EGKVYRDIVGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY-ILLSGVPP 295
RD+ + YY + PE ++ R + E DVWS GV+L+ I G P
Sbjct: 176 -----RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
Query: 296 FWAETEKGIFDAILKGGV 313
++ + + + I +G V
Sbjct: 231 WYQLSNNEVIECITQGRV 248
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR--EIQIMQHLSGQQNIVE 159
+GRG FG + + TG A K + R ++ R E+ LS + IV
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV----------RLEVFRVEELVACAGLSSPR-IVP 114
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
GA + V++ MEL GG L I G E A + + + H ++H
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV------GSAYYVAPE-VLRRS 272
D+K +N LLS+ A L DFG ++ + + + ++ G+ ++APE V+ +
Sbjct: 175 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKG 303
++D+WS+ ++ +L+G P W + +G
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHP-WTQYFRG 262
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 93 RQFYTLGKELGRGQFGIT-----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R LGK LGRG FG + + +T + A K +LK + + R + E++I
Sbjct: 26 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRA-LMSELKI 83
Query: 148 MQHLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQGH--------YTE--KA 196
+ H+ N+V GA + + +++E C G L + ++ + Y +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 197 AAALCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDEG 251
+C + V F+ +HRDL N LLS K+ ++K DFGL+ ++ D
Sbjct: 144 EHLICYSF-QVAKGMEFLASRKXIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPD 199
Query: 252 KVYR-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAI 308
V + D ++APE + R Y + DVWS GV+L+ + S G P+ F
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 259
Query: 309 LKGGVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
LK G + + + ++ + ML +P +R T +E++EH
Sbjct: 260 LKEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 38/287 (13%)
Query: 93 RQFYTLGKELGRGQFGIT-----YLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R LGK LGRG FG + + +T + A K +LK + + R + E++I
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRA-LMSELKI 85
Query: 148 MQHLSGQQNIVEFRGAY-EDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAALCRAIV 205
+ H+ N+V GA + + +++E C G L + ++ + L + +
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 206 NVVHHCHF-------------MGVMHRDLKPENFLLSNKDGGAMLKATDFGLS--VFIDE 250
+ H + +HRDL N LLS K+ ++K DFGL+ + D
Sbjct: 146 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN---VVKICDFGLARDIXKDP 202
Query: 251 GKVYR-DIVGSAYYVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDA 307
V + D ++APE + R Y + DVWS GV+L+ + S G P+ F
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 308 ILKGGVDFESEPWLLISDSAKDLVRKML---IQDPKKRITSAEVLEH 351
LK G + + + ++ + ML +P +R T +E++EH
Sbjct: 263 RLKEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDEASIKEIISEVDTDNDGRINYEEFC 530
E + +AF+ FD+D +G+I++ EL TAM+ G + +E ++ II +D D DG++++EEF
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 531 TMM 533
T++
Sbjct: 96 TLL 98
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
+ E+E++ ++ F D D +G I+ +EL T + LG +E E++ ++ D+DG+G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 454 DYIEFIS 460
D+ EF++
Sbjct: 90 DFEEFVT 96
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++ S G L + + + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 451 GTIDYIEFISATMHRYR 467
GTID+ EF++ + +
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 473 HLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCT 531
+AF FDKD G IT EL T M+ G EA ++++I+EVD D DG I++ EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 532 MM 533
MM
Sbjct: 71 MM 72
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 31/246 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC------TENSTGNSYACKSILKRKLVNKQDREDIKREIQ 146
R LGK LG G FG L + + +LK K D D+ E++
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEME 85
Query: 147 IMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-----------GHYTEK 195
+M+ + +NI+ GA +++++E S G L + + A+ H E+
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEE 145
Query: 196 AAAA--LCRAIVNVVHHCHFMG---VMHRDLKPENFLLSNKDGGAMLKATDFGLSV---F 247
++ L V ++ +HRDL N L++ + ++K DFGL+
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHH 202
Query: 248 IDEGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPFWAETEKGIF 305
ID K + ++APE L R Y + DVWS GV+L+ I G P+ + +F
Sbjct: 203 IDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 306 DAILKG 311
+ +G
Sbjct: 263 KLLKEG 268
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 102 LGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKR--EIQIMQHLSGQQNIVE 159
+GRG FG + + TG A K + R ++ R E+ LS + IV
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV----------RLEVFRVEELVACAGLSSPR-IVP 130
Query: 160 FRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHR 219
GA + V++ MEL GG L I G E A + + + H ++H
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 220 DLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIV------GSAYYVAPE-VLRRS 272
D+K +N LLS+ A L DFG ++ + + + ++ G+ ++APE V+ +
Sbjct: 191 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 273 YGKEIDVWSAGVILYILLSGVPPFWAETEKG 303
++D+WS+ ++ +L+G P W + +G
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHP-WTQYFRG 278
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 58.5 bits (140), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 403 KTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEF--IS 460
+ +F +D + G+++YEE+K ++ +E ++ + A D+DGNG ID EF +
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 461 ATMHRYRLERDE-HLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEASIKEIISEVDTD 519
A + L ++ L ++ D D G +T++E+ T K +G E + +I+ + D +
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY--EKVVDQIM-KADAN 119
Query: 520 NDGRINYEEF 529
DG I EEF
Sbjct: 120 GDGYITLEEF 129
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 379 MNKLKKMALKVIAEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEV 438
+ + K A V + LS+E++ GLK ++ MD D G +T EE+ T + G E V
Sbjct: 55 LAEFTKFAAAVKEQDLSDEKV-GLKILYKLMDADGDGKLTKEEVTTFFKKFG---YEKVV 110
Query: 439 KQLMDAADVDGNGTIDYIEFIS 460
Q+M AD +G+G I EF++
Sbjct: 111 DQIMK-ADANGDGYITLEEFLA 131
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 23/281 (8%)
Query: 73 TSTRPVQKPETV-LGKPLEDI-RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
T+ P KP+T L K +I R+ L +LG+G FG ++ T N T + +K
Sbjct: 161 TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-----TRVAIKT 215
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ- 189
E +E Q+M+ L ++ + + A + +++V E S G L D + +
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGET 273
Query: 190 GHYTEKAAAA-LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
G Y + I + + + M +HRDL+ N L+ + K DFGL+ I
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLI 330
Query: 249 DEGKVYRDIVGSAY---YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
++ + Y G+ + + APE L + + DVWS G++L L + G P+ +
Sbjct: 331 EDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
Query: 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT 344
+ D + + G P +S DL+ + ++P++R T
Sbjct: 390 VLDQVER-GYRMPCPP--ECPESLHDLMCQCWRKEPEERPT 427
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 23/281 (8%)
Query: 73 TSTRPVQKPETV-LGKPLEDI-RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
T+ P KP+T L K +I R+ L +LG+G FG ++ T N T + +K
Sbjct: 161 TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-----TRVAIKT 215
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ- 189
E +E Q+M+ L ++ + + A + +++V E S G L D + +
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVTEYMSKGSLLDFLKGET 273
Query: 190 GHYTEKAAAA-LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
G Y + I + + + M +HRDL+ N L+ + K DFGL+ I
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLI 330
Query: 249 DEGKVYRDIVGSAY---YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
++ + Y G+ + + APE L + + DVWS G++L L + G P+ +
Sbjct: 331 EDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
Query: 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT 344
+ D + + G P +S DL+ + ++P++R T
Sbjct: 390 VLDQVER-GYRMPCPP--ECPESLHDLMCQCWRKEPEERPT 427
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 56 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 115
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 116 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 171
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 172 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 231
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 289
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 36 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 95
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 96 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 151
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 152 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 211
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 269
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ L++E+I K F+ D D G IT +EL T + LG +E E++ +++ D DGN
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 451 GTIDYIEFIS 460
GTID+ EF++
Sbjct: 61 GTIDFPEFLN 70
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E+ +AF FDKD G IT EL T M+ G EA ++++I+EVD D +G I++
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 528 EFCTMM 533
EF +M
Sbjct: 67 EFLNLM 72
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FI 248
T K + + + + +HRDL N L++ + ++K DFGL+ I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 249 DEGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILY--ILLSGVP 294
D K + ++APE L R Y + DVWS GV+++ L G P
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 30 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 89
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 90 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 145
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 30 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 89
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 90 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 145
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGC 205
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 46 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 105
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 106 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 161
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 162 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 221
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 279
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++ S G L + + + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEG 251
T K + + + + +HRDL N L++ + ++K DFGL+ I+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 252 KVYRDIVGS---AYYVAPEVL-RRSYGKEIDVWSAGVILY-ILLSGVPPF 296
Y+ ++APE L R Y + DVWS GV+++ I G P+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKEIISEVDTDNDGRINYEE 528
+E L +AF+ FDKD +GYI+ EL M + G + DE ++++I E D D DG++NYEE
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE-EVEQMIKEADLDGDGQVNYEE 66
Query: 529 FCTMM 533
F MM
Sbjct: 67 FVKMM 71
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
LK F D D++G I+ EL+ + LG KL++ EV+Q++ AD+DG+G ++Y EF+
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
Query: 462 TM 463
M
Sbjct: 71 MM 72
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 93 RQFYTLGKELGRGQFGITYLC-----TENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
R TLGK LG G FG + ++ + + + ++D D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKI----------------IAQGH 191
M+ + +NI+ GA +++++E S G L + + + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 192 YTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSV---FI 248
T K + + + + +HRDL N L++ + ++K DFGL+ I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNI 210
Query: 249 DEGKVYRDIVGSAYYVAPEVL-RRSYGKEIDVWSAGVILY--ILLSGVP 294
D K + ++APE L R Y + DVWS GV+++ L G P
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 88
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 89 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 144
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 262
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKEIISEVDTDNDGRINYEE 528
+E L +AF+ FDKD +GYI+ EL M + G + DE ++++I E D D DG++NYEE
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE-EVEQMIKEADLDGDGQVNYEE 61
Query: 529 FCTMMRS 535
F MM +
Sbjct: 62 FVKMMMT 68
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
LK F D D++G I+ EL+ + LG KL++ EV+Q++ AD+DG+G ++Y EF+
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Query: 462 TM 463
M
Sbjct: 66 MM 67
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 21 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 80
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 81 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 136
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 137 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 129
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 130 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 185
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 186 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 303
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 23/281 (8%)
Query: 73 TSTRPVQKPETV-LGKPLEDI-RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKR 130
T+ P KP+T L K +I R+ L +LG+G FG ++ T N T + +K
Sbjct: 161 TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-----TRVAIKT 215
Query: 131 KLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ- 189
E +E Q+M+ L ++ + + A + +++V E S G L D + +
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLY--AVVSEEPIYIVGEYMSKGSLLDFLKGET 273
Query: 190 GHYTEKAAAA-LCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFI 248
G Y + I + + + M +HRDL+ N L+ + K DFGL+ I
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLI 330
Query: 249 DEGKVYRDIVGSAY---YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKG 303
++ + Y G+ + + APE L + + DVWS G++L L + G P+ +
Sbjct: 331 EDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
Query: 304 IFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRIT 344
+ D + + G P +S DL+ + ++P++R T
Sbjct: 390 VLDQVER-GYRMPCPP--ECPESLHDLMCQCWRKEPEERPT 427
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 47 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 106
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 107 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 162
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 163 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 280
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 50/208 (24%)
Query: 199 ALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDG-GAMLKATDFGLS-VFIDEGKVYRD 256
+L I++ +H+ H V+HRDLKP N L+ + +K D G + +F K D
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 257 ---IVGSAYYVAPEVL--RRSYGKEIDVWSAGVILYILLSGVPPFWAETE---------- 301
+V + +Y APE+L R Y K ID+W+ G I LL+ P F E
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251
Query: 302 ---KGIFDAI-LKGGVDFES-----EPWLLISDSAKD----------------------- 329
IF+ + D+E E L+ D ++
Sbjct: 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF 311
Query: 330 -LVRKMLIQDPKKRITSAEVLEHPWMRE 356
L++K+L DP KRITS + ++ P+ E
Sbjct: 312 HLLQKLLTMDPIKRITSEQAMQDPYFLE 339
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 171 HLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSN 230
++VME GG+ + Q +A A L I+ + + H +G+++ DLKPEN +L+
Sbjct: 160 YIVMEYV-GGQSLKRSKGQKLPVAEAIAYLLE-ILPALSYLHSIGLVYNDLKPENIMLTE 217
Query: 231 KDGGAMLKATDFGLSVFIDE-GKVYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYIL 289
+ LK D G I+ G +Y G+ + APE++R D+++ G L L
Sbjct: 218 E----QLKLIDLGAVSRINSFGYLY----GTPGFQAPEIVRTGPTVATDIYTVGRTLAAL 269
Query: 290 LSGVPPFWAETEKGIFDAILKGGVDFESEPWLLISDSAKDLVRKMLIQDPKKRITSAE 347
+P T G + L E +P L DS L+R+ + DP++R T+AE
Sbjct: 270 TLDLP-----TRNGRYVDGLP-----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAE 317
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 45/253 (17%)
Query: 93 RQFYTLGKELGRGQFGITYL--CTENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQH 150
R+ L +ELG G FG +L C S ++ K R+D +RE +++ +
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN 73
Query: 151 LSGQQNIVEFRGAYEDRQSVHLVMELCSGGELF--------DKII--------AQGHYTE 194
L ++IV+F G D + +V E G+L D +I A+G
Sbjct: 74 LQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 195 KAAAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVY 254
+ I + + + +HRDL N L+ ++K DFG+S
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMS--------- 180
Query: 255 RDIVGSAYY------------VAPE-VLRRSYGKEIDVWSAGVILY-ILLSGVPPFWAET 300
RD+ + YY + PE ++ R + E DVWS GVIL+ I G P++ +
Sbjct: 181 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 301 EKGIFDAILKGGV 313
+ + I +G V
Sbjct: 241 NTEVIECITQGRV 253
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 379 MNKLKKMALKVIAEALSE--EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSET 436
M+ + K+ A+ LS I+GL F +D D S ++ +E + GLA+LG L +
Sbjct: 14 MDAVDATMEKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQA 73
Query: 437 EVKQLMDAADVDGNGTIDYIEFISATMHRYRLERDEHLYKAFQYFDKDNSGYITRDEL 494
E + + D +G+GT+D EF+ A R+ + AF D+ G +T D+L
Sbjct: 74 EAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDL 131
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 455 YIEFISATMHRYR---LERD----EHLYKAFQYFDKDNSGYITRDELETAMKDYG-IGDE 506
+++ + ATM + R L R + L + F+ D+D S + DE + G + D+
Sbjct: 13 HMDAVDATMEKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQ 72
Query: 507 ASIKEIISEVDTDNDGRINYEEFCTMMRSGTPQPAKLI 544
A + + + D + G ++ EEF +R Q + +
Sbjct: 73 AEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAV 110
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 93 RQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKL---VNKQDREDIKREIQIMQ 149
R+ TL + LG G FG Y + N + + + L ++QD D E I+
Sbjct: 44 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIIS 103
Query: 150 HLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKAAAALCRAIVNVVH 209
+ QNIV G +++EL +GG+L + + ++L A+++++H
Sbjct: 104 KFN-HQNIVRCIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSL--AMLDLLH 159
Query: 210 -------HCHFM---GVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRD--- 256
C ++ +HRD+ N LL+ G + K DFG++ I YR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 257 IVGSAYYVAPEVLRRS-YGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGG 312
+ ++ PE + + D WS GV+L+ + S G P+ +++ + + + + GG
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 277
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P E +R L +LG+G FG ++ T N T + +K E +E Q+
Sbjct: 16 PRESLR----LEVKLGQGCFGEVWMGTWNGT-----TRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAA-LCRAIV 205
M+ L ++ + + A + +++VME S G L D + + G Y + I
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY--- 262
+ + + M +HRDL+ N L+ + K DFGL+ I++ + Y G+ +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNE-YTARQGAKFPIK 180
Query: 263 YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320
+ APE L + + DVWS G++L L + G P+ + + D + + G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPP- 238
Query: 321 LLISDSAKDLVRKMLIQDPKKRIT 344
+S DL+ + +DP++R T
Sbjct: 239 -ECPESLHDLMCQCWRKDPEERPT 261
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 394 LSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTI 453
L+EE+I K FA D D +G+I+ EL T + LG SE EV LM+ DVDGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 454 DYIEFISATMHR 465
++ EF+ A M R
Sbjct: 64 EFSEFL-ALMSR 74
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 469 ERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYE 527
E+ +AF FDKDN+G I+ EL T M+ G+ EA + ++++E+D D + +I +
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 528 EFCTMM 533
EF +M
Sbjct: 67 EFLALM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ LSEE+I K F D D G IT EEL T + L +E E++ ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 451 GTIDYIEFIS 460
GTI++ EF+S
Sbjct: 61 GTIEFDEFLS 70
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533
+AF FDKD G IT +EL T ++ E ++++ISEVD D +G I ++EF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 98/256 (38%), Gaps = 40/256 (15%)
Query: 78 VQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLCTEN-STGNSYACKSILKRKLVNKQ 136
V+K L + + + + + ++G G F YL T G + I + L+
Sbjct: 5 VKKDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPE---EKIALKHLIPTS 61
Query: 137 DREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQGHYTEKA 196
I E+Q + GQ N++ + + V + M D I+ + E
Sbjct: 62 HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLD-ILNSLSFQEVR 120
Query: 197 AAALCRAIVNVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGL------------ 244
L + + H G++HRD+KP NFL + + L DFGL
Sbjct: 121 EYML--NLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELL 176
Query: 245 -----------------SVFIDEGKVYRDIVGSAYYVAPEVLRRSYGK--EIDVWSAGVI 285
S+ + + G+ + APEVL + + ID+WSAGVI
Sbjct: 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVI 236
Query: 286 LYILLSGVPPFWAETE 301
LLSG PF+ ++
Sbjct: 237 FLSLLSGRYPFYKASD 252
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 51/268 (19%)
Query: 54 PKMSAPQPQPRQQPMKSSATSTRPVQKPETVLGKPLEDIRQFYTLGKELGRGQFGITYLC 113
P+M+ R P K+S TS +Q+ + P E + +G+ +G+G+FG Y
Sbjct: 2 PEMNLSLLSARSFPRKASQTSIF-LQEWDI----PFEQLE----IGELIGKGRFGQVY-- 50
Query: 114 TENSTGNSYACKSILKRKLVNKQDRED----IKREIQIMQHLSGQQNIVEFRGAYEDRQS 169
G + +I R + ++D ED KRE+ + + +N+V F GA
Sbjct: 51 ----HGRWHGEVAI--RLIDIERDNEDQLKAFKREVMAYRQ-TRHENVVLFMGACMSPPH 103
Query: 170 VHLVMELCSGGELFD-----KIIAQGHYTEKAAAALCRAIVNVVHHCHFMGVMHRDLKPE 224
+ ++ LC G L+ KI+ + T + A + IV + + H G++H+DLK +
Sbjct: 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIA----QEIVKGMGYLHAKGILHKDLKSK 159
Query: 225 NFLLSNKDGGAMLKATDFGL---SVFIDEGK---VYRDIVGSAYYVAPEVLRR------- 271
N N G ++ TDFGL S + G+ R G ++APE++R+
Sbjct: 160 NVFYDN--GKVVI--TDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215
Query: 272 ---SYGKEIDVWSAGVILYILLSGVPPF 296
+ K DV++ G I Y L + PF
Sbjct: 216 DKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 391 AEALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGN 450
A+ LSEE+I K F D D G IT EEL T + L +E E++ ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 451 GTIDYIEFIS 460
GTI++ EF+S
Sbjct: 61 GTIEFDEFLS 70
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 476 KAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDNDGRINYEEFCTMM 533
+AF FDKD G IT +EL T ++ E ++++ISEVD D +G I ++EF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 392 EALSEEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNG 451
+ L+EE+I K F+ D D GTIT +EL T + LG +E E++ +++ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 452 TIDYIEFIS 460
TID+ EF++
Sbjct: 62 TIDFPEFLT 70
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 463 MHRYRLERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIG-DEASIKEIISEVDTDND 521
M + E+ +AF +DKD G IT EL T M+ G+ EA ++++I+EVD D +
Sbjct: 1 MDQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGN 60
Query: 522 GRINYEEFCTMM 533
G I++ EF TMM
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 67/283 (23%)
Query: 114 TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL- 172
T N +S+ CK +L REI+++ H NI+ R + VH
Sbjct: 63 TVNILSDSFLCKRVL--------------REIRLLNHFH-HPNILGLRDIF-----VHFE 102
Query: 173 ---VMELCSGGELFDKIIAQGHYTEKAAAA------LCRAIVNVVHHCHFMGVMHRDLKP 223
+ +L EL +AQ + ++ + I+ +H H GV+HRDL P
Sbjct: 103 EPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHP 162
Query: 224 ENFLLSNKDGGAMLKATDFGLSV--FIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDV 279
N LL++ + + DF L+ D K + V +Y APE++ + + K +D+
Sbjct: 163 GNILLADNND---ITICDFNLAREDTADANKTH--YVTHRWYRAPELVMQFKGFTKLVDM 217
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAI--------LKGGVDFES-------------- 317
WSAG ++ + + F T + I ++ V F S
Sbjct: 218 WSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNV 277
Query: 318 --EPWLLISDSAK----DLVRKMLIQDPKKRITSAEVLEHPWM 354
W + +A DL+ KML +P++RI++ + L HP+
Sbjct: 278 PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 67/283 (23%)
Query: 114 TENSTGNSYACKSILKRKLVNKQDREDIKREIQIMQHLSGQQNIVEFRGAYEDRQSVHL- 172
T N +S+ CK +L REI+++ H NI+ R + VH
Sbjct: 63 TVNILSDSFLCKRVL--------------REIRLLNHFH-HPNILGLRDIF-----VHFE 102
Query: 173 ---VMELCSGGELFDKIIAQGHYTEKAAAA------LCRAIVNVVHHCHFMGVMHRDLKP 223
+ +L EL +AQ + ++ + I+ +H H GV+HRDL P
Sbjct: 103 EPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHP 162
Query: 224 ENFLLSNKDGGAMLKATDFGLSV--FIDEGKVYRDIVGSAYYVAPEVLR--RSYGKEIDV 279
N LL++ + + DF L+ D K + V +Y APE++ + + K +D+
Sbjct: 163 GNILLADNND---ITICDFNLAREDTADANKTH--YVTHRWYRAPELVMQFKGFTKLVDM 217
Query: 280 WSAGVILYILLSGVPPFWAETEKGIFDAI--------LKGGVDFES-------------- 317
WSAG ++ + + F T + I ++ V F S
Sbjct: 218 WSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNV 277
Query: 318 --EPWLLISDSAK----DLVRKMLIQDPKKRITSAEVLEHPWM 354
W + +A DL+ KML +P++RI++ + L HP+
Sbjct: 278 PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 471 DEHLYKAFQYFDKDNSGYITRDELETAMKDYG--IGDEASIKEIISEVDTDNDGRINYEE 528
+E + +AF+ FDKD +GYI+ EL M + G + DE + E+I E D D DG++NYEE
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE-EVDEMIREADIDGDGQVNYEE 59
Query: 529 FCTMM 533
F MM
Sbjct: 60 FVQMM 64
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 396 EEEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDY 455
EEEI+ F D D +G I+ EL+ + LG KL++ EV +++ AD+DG+G ++Y
Sbjct: 1 EEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 57
Query: 456 IEFI 459
EF+
Sbjct: 58 EEFV 61
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 402 LKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFISA 461
++ F D D G ++ EEL + L LG + E+ + G ++ EF A
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKEFDLA 58
Query: 462 TMHR-YR------LERDEHLYKAFQYFDKDNSGYITRDELETAMKDYGIGDEAS-IKEII 513
T YR E+ + + AF+ DK+ +G I EL + + G +S ++E++
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
Query: 514 SEVDTDNDGRINYEEFCTMMRSGTP 538
EV DG INYE F M+ +G P
Sbjct: 119 KEVSVSGDGAINYESFVDMLVTGYP 143
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 397 EEIKGLKTMFANMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYI 456
E+ K + F +D + +GTI EL+ L LG L+ +EV++LM V G+G I+Y
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 457 EFISATMHRYRL 468
F+ + Y L
Sbjct: 133 SFVDMLVTGYPL 144
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 472 EHLYKAFQYFDKDNSGYITRDELETAMKDYG 502
+ + + FQ FDKDN G ++ +EL +A++ G
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLG 35
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 88 PLEDIRQFYTLGKELGRGQFGITYLCTENSTGNSYACKSILKRKLVNKQDREDIKREIQI 147
P E +R L +LG+G FG ++ T N T + +K E +E Q+
Sbjct: 16 PRESLR----LEVKLGQGCFGEVWMGTWNGT-----TRVAIKTLKPGTMSPEAFLQEAQV 66
Query: 148 MQHLSGQQNIVEFRGAYEDRQSVHLVMELCSGGELFDKIIAQ-GHYTEKAAAA-LCRAIV 205
M+ L ++ + + A + +++V+E S G L D + + G Y + I
Sbjct: 67 MKKLRHEKLVQLY--AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 206 NVVHHCHFMGVMHRDLKPENFLLSNKDGGAMLKATDFGLSVFIDEGKVYRDIVGSAY--- 262
+ + + M +HRDL+ N L+ + K DFGL+ I++ + Y G+ +
Sbjct: 125 SGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNE-YTARQGAKFPIK 180
Query: 263 YVAPE-VLRRSYGKEIDVWSAGVILYILLS-GVPPFWAETEKGIFDAILKGGVDFESEPW 320
+ APE L + + DVWS G++L L + G P+ + + D + + G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPP- 238
Query: 321 LLISDSAKDLVRKMLIQDPKKRIT 344
+S DL+ + +DP++R T
Sbjct: 239 -ECPESLHDLMCQCWRKDPEERPT 261
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,022,846
Number of Sequences: 62578
Number of extensions: 672184
Number of successful extensions: 6508
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 382
Number of HSP's that attempted gapping in prelim test: 2235
Number of HSP's gapped (non-prelim): 2032
length of query: 544
length of database: 14,973,337
effective HSP length: 104
effective length of query: 440
effective length of database: 8,465,225
effective search space: 3724699000
effective search space used: 3724699000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)