BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>009097
MEKFLKLLRLSSYQVCYDVVEFTGPFDYLGFFSSIDNIFTCLWTLATYISHQFIHFIEDI
ILRDISRFSGELFVSSGEHPRSSTQSICKSILEECSSSFNCYIARTVCGRRALGPRVGLF
VNTRFEVIEANCRYLGIPFTFNWLMLPLFGIQLAWRLAIASWRCPFHYIRCAQGRVRSIS
SRVRRTLHGSSDDIGWLQQTPGMAPVEDGTARFLELLECIRNGEHTLPDSFVYLLIPGLF
SNHGPLYFVATKKFFSKKGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKRVMLLGH
SKGGVDAAAALSMYWSDLKDKVAGLALVQSPYGGTPVASDILREGQIADRETRRIMEFLI
CKLIKGDIRALEDLTYEKRKEFIMNHKLPEEIPLISFHSEASVAPGVLATMTHIAHAELP
WLPLPNFGGEESDNSAQAGRQVPVVIPVSAAMAVCALHLQLRYGEKSDGLVTCRDAEVPG
SVVVRPNQKLDHAWMVYSSWKKNPTEPDPCEMCEALLTQLVEIGKSEQGKKGVGSSSTSN
STT

High Scoring Gene Products

Symbol, full name Information P value
PSPTO_2821
Uncharacterized protein
protein from Pseudomonas syringae pv. tomato str. DC3000 0.00099

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  009097
        (543 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2054977 - symbol:AT2G44970 species:3702 "Arabi...  1174  2.9e-119  1
UNIPROTKB|Q881R2 - symbol:PSPTO_2821 "Uncharacterized pro...   114  0.00099   1


>TAIR|locus:2054977 [details] [associations]
            symbol:AT2G44970 species:3702 "Arabidopsis thaliana"
            [GO:0006505 "GPI anchor metabolic process" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0016788 "hydrolase activity, acting on ester bonds"
            evidence=IEA] [GO:0031227 "intrinsic to endoplasmic reticulum
            membrane" evidence=IEA] EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0016787 EMBL:BT001943 IPI:IPI00548038 RefSeq:NP_850428.1
            UniGene:At.28043 ProteinModelPortal:Q84WV5 IntAct:Q84WV5
            PRIDE:Q84WV5 EnsemblPlants:AT2G44970.1 GeneID:819105
            KEGG:ath:AT2G44970 HOGENOM:HOG000077414 InParanoid:Q84WV5
            OMA:MAACAQL ProtClustDB:CLSN2680251 Genevestigator:Q84WV5
            Uniprot:Q84WV5
        Length = 503

 Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
 Identities = 230/346 (66%), Positives = 277/346 (80%)

Query:   186 TLHGSSDDIGWLQQTPGMAPVEDGTARFLELLECIRNGEHTLPDSFVYLLIPGLFSNHGP 245
             T+ GS+DDIGWLQ+ P M PVEDGT RF ++LE I +G H LP++ VYLL+PGLFSNHGP
Sbjct:   166 TVRGSADDIGWLQRAPEMPPVEDGTDRFNKILEDIGHGVHRLPNTVVYLLVPGLFSNHGP 225

Query:   246 LYFVATKKFFSKKGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKRVMLLGHSKGGV 305
             LYFV TK  FSK GLACHIAKIHSE+SVE NA E+K+YIEEL WGS KRV+LLGHSKGG+
Sbjct:   226 LYFVDTKTKFSKMGLACHIAKIHSESSVEKNAREIKEYIEELCWGSNKRVLLLGHSKGGI 285

Query:   306 DAAAALSMYWSDLKDKVAGLALVQSPYGGTPVASDILREGQIADR-ETRRIMEFLICKLI 364
             DAAAALS+YW +LKDKVAGL L QSPYGG+P+A+DILREGQ+ D    R++ME LI K+I
Sbjct:   286 DAAAALSLYWPELKDKVAGLVLAQSPYGGSPIATDILREGQLGDYVNLRKMMEILISKVI 345

Query:   365 KGDIRALEDLTYEKRKEFIMNHKLPEEIPLISFHSEASVAPGVLATMTHIAHAELPWLPL 424
             KGDI+ALEDLTYE+RKEF+ NH LP E+P +SF +EAS++P VL+T++H+AHAELP   L
Sbjct:   346 KGDIQALEDLTYERRKEFLKNHPLPRELPTVSFRTEASISPAVLSTLSHVAHAELP---L 402

Query:   425 PNFGGEESDNSAQAGRQVPVVIPVSAAMAVCALHLQLRYGEKSDGLVTCRDAEVPGSVVV 484
              N          QA + +PVV+P+ AAMA CA  LQ+RYGEKSDGLVTC DAEVPGSVVV
Sbjct:   403 TN----------QAAK-LPVVMPLGAAMAACAQLLQVRYGEKSDGLVTCCDAEVPGSVVV 451

Query:   485 RPNQKLDHAWMVYSSWKKNPTEPDPCEMCEALLTQLVEIGKSEQGK 530
             RP +KLDHAWMVYSS  + P E D  ++CEALLT LV++ +  Q K
Sbjct:   452 RPKRKLDHAWMVYSSLNEVPLEADAAQVCEALLTLLVQVEQERQQK 497


>UNIPROTKB|Q881R2 [details] [associations]
            symbol:PSPTO_2821 "Uncharacterized protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE016853 GenomeReviews:AE016853_GR RefSeq:NP_792625.1
            DNASU:1184475 GeneID:1184475 KEGG:pst:PSPTO_2821 PATRIC:19996994
            eggNOG:bactNOG90424 HOGENOM:HOG000051133 OMA:CDGIALV
            ProtClustDB:CLSK306901 BioCyc:PSYR223283:GJIX-2868-MONOMER
            Uniprot:Q881R2
        Length = 302

 Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
 Identities = 47/154 (30%), Positives = 70/154 (45%)

Query:   196 WLQQTPGMAPVEDGTAR-FLEL-LECIRNGEHTLPDSFVYLLIPGLFSNHGPLYFV-ATK 252
             W +  P  A V    A  + EL L+  R     LP   + +L+ GL+S    LY   A  
Sbjct:    13 WQRHFPATAFVRPPAALDWTELFLQRWRTPRLGLPKDTLVVLVAGLYSEF-ILYCNRACA 71

Query:   253 KFFSKKGLACHIAKIHSEASV----EHNAWELKQYIEELYWGSGKRVMLLGHSKGGVDAA 308
             +    +G       + S   +    EH A  L   ++      G+R ++L HSKG +D  
Sbjct:    72 RSLKSEGYEVLRMPVRSSRGIIAQGEHIATVLGSRLKP-----GQRFVVLAHSKGSLDTL 126

Query:   309 AALSMYWSDLKDKVAGLALVQSPYGGTPVASDIL 342
             AAL+   + L D   G+ALVQ P G +P+  D+L
Sbjct:   127 AALTQPPA-LLDACDGIALVQPPVGPSPIIDDVL 159


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      543       523   0.00090  119 3  11 22  0.50    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  345 KB (2172 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  44.46u 0.24s 44.70t   Elapsed:  00:00:03
  Total cpu time:  44.46u 0.24s 44.70t   Elapsed:  00:00:03
  Start:  Tue May 21 00:56:20 2013   End:  Tue May 21 00:56:23 2013

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