Query 009099
Match_columns 543
No_of_seqs 492 out of 2977
Neff 11.0
Searched_HMMs 46136
Date Thu Mar 28 20:24:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009099.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009099hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 1E-42 2.3E-47 355.9 41.2 419 99-531 162-740 (742)
2 KOG0569 Permease of the major 100.0 2.2E-41 4.8E-46 324.5 42.0 440 101-541 8-471 (485)
3 PRK10077 xylE D-xylose transpo 100.0 3E-40 6.5E-45 334.4 43.0 431 102-542 10-475 (479)
4 TIGR00887 2A0109 phosphate:H+ 100.0 8.6E-41 1.9E-45 338.3 36.2 431 99-538 11-502 (502)
5 TIGR00879 SP MFS transporter, 100.0 6E-39 1.3E-43 325.8 39.9 431 100-533 24-479 (481)
6 COG2271 UhpC Sugar phosphate p 100.0 2E-40 4.4E-45 302.9 20.5 405 95-525 20-435 (448)
7 KOG0254 Predicted transporter 100.0 2.8E-37 6E-42 312.5 42.2 439 103-541 44-500 (513)
8 COG2814 AraJ Arabinose efflux 100.0 2.5E-37 5.5E-42 287.6 33.5 373 103-525 12-387 (394)
9 PRK10642 proline/glycine betai 100.0 1.3E-36 2.8E-41 306.6 37.0 395 105-529 17-434 (490)
10 PRK12307 putative sialic acid 100.0 6.4E-36 1.4E-40 298.1 36.5 392 103-527 17-412 (426)
11 PRK09556 uhpT sugar phosphate 100.0 2.9E-37 6.4E-42 309.9 26.6 397 100-522 25-447 (467)
12 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2E-36 4.2E-41 298.4 31.5 391 102-513 6-410 (412)
13 TIGR00898 2A0119 cation transp 100.0 3.9E-37 8.4E-42 313.4 27.1 388 125-533 110-503 (505)
14 PRK11663 regulatory protein Uh 100.0 2.2E-36 4.7E-41 300.6 30.7 396 103-530 22-430 (434)
15 PRK11551 putative 3-hydroxyphe 100.0 1.2E-35 2.7E-40 294.0 34.3 376 100-521 11-393 (406)
16 PRK03545 putative arabinose tr 100.0 1.2E-35 2.6E-40 291.9 33.5 371 103-525 8-381 (390)
17 PRK09705 cynX putative cyanate 100.0 2.5E-35 5.4E-40 289.0 35.3 375 103-531 9-388 (393)
18 TIGR00891 2A0112 putative sial 100.0 8E-35 1.7E-39 288.7 37.0 388 99-508 7-400 (405)
19 PRK10406 alpha-ketoglutarate t 100.0 8.2E-35 1.8E-39 289.4 36.5 377 102-522 20-422 (432)
20 TIGR00903 2A0129 major facilit 100.0 2.7E-35 5.9E-40 283.9 29.4 355 116-521 3-362 (368)
21 PF00083 Sugar_tr: Sugar (and 100.0 1.5E-41 3.2E-46 341.1 -15.8 430 110-539 6-451 (451)
22 PRK11273 glpT sn-glycerol-3-ph 100.0 2.5E-34 5.5E-39 287.4 33.3 404 102-534 27-444 (452)
23 KOG0253 Synaptic vesicle trans 100.0 1.7E-33 3.8E-38 250.4 33.5 416 100-532 74-527 (528)
24 TIGR00890 2A0111 Oxalate/Forma 100.0 1.6E-34 3.5E-39 283.6 29.8 363 110-517 10-375 (377)
25 PRK15075 citrate-proton sympor 100.0 2.6E-33 5.7E-38 278.7 36.6 359 104-503 15-398 (434)
26 PRK05122 major facilitator sup 100.0 1.8E-33 3.9E-38 277.8 34.9 367 108-530 19-394 (399)
27 PRK09952 shikimate transporter 100.0 3.8E-33 8.2E-38 277.3 36.8 379 104-521 22-430 (438)
28 PRK03893 putative sialic acid 100.0 1.9E-33 4.2E-38 285.8 34.7 400 101-513 17-442 (496)
29 PRK14995 methyl viologen resis 100.0 2.7E-33 5.9E-38 282.6 35.4 382 102-499 4-413 (495)
30 PRK10213 nepI ribonucleoside t 100.0 8.9E-33 1.9E-37 270.7 36.6 364 103-519 19-386 (394)
31 TIGR00893 2A0114 d-galactonate 100.0 1.2E-33 2.7E-38 279.5 30.5 386 114-521 4-396 (399)
32 PRK15034 nitrate/nitrite trans 100.0 7.2E-33 1.6E-37 267.8 34.0 375 104-526 34-456 (462)
33 PRK03699 putative transporter; 100.0 1.7E-33 3.6E-38 276.8 29.8 368 104-521 7-377 (394)
34 PRK10091 MFS transport protein 100.0 5.1E-33 1.1E-37 272.1 32.8 368 107-525 6-377 (382)
35 PRK12382 putative transporter; 100.0 1.2E-32 2.6E-37 271.1 34.3 359 110-523 21-388 (392)
36 PRK10489 enterobactin exporter 100.0 3.7E-33 8E-38 276.8 30.0 381 113-539 26-414 (417)
37 TIGR00894 2A0114euk Na(+)-depe 100.0 8.6E-33 1.9E-37 278.1 30.0 397 98-522 13-448 (465)
38 PLN00028 nitrate transmembrane 100.0 2E-32 4.4E-37 274.4 32.1 374 108-523 40-432 (476)
39 TIGR00892 2A0113 monocarboxyla 100.0 4.1E-33 8.9E-38 278.0 25.9 390 102-518 17-415 (455)
40 PRK15402 multidrug efflux syst 100.0 5.3E-32 1.1E-36 267.7 33.3 368 99-508 8-379 (406)
41 PRK03633 putative MFS family t 100.0 2.2E-31 4.8E-36 260.7 36.4 359 106-521 8-369 (381)
42 TIGR00712 glpT glycerol-3-phos 100.0 1.2E-32 2.6E-37 274.3 27.8 403 102-528 25-437 (438)
43 TIGR00895 2A0115 benzoate tran 100.0 6E-32 1.3E-36 267.5 31.8 381 101-496 14-397 (398)
44 PRK10504 putative transporter; 100.0 1.3E-31 2.7E-36 270.4 34.4 380 107-503 13-419 (471)
45 KOG0252 Inorganic phosphate tr 100.0 1.7E-33 3.6E-38 258.7 16.2 429 99-540 36-513 (538)
46 TIGR00711 efflux_EmrB drug res 100.0 1.6E-31 3.5E-36 271.3 31.8 381 105-500 3-411 (485)
47 KOG1330 Sugar transporter/spin 100.0 1.8E-33 3.8E-38 259.9 15.4 380 100-503 29-417 (493)
48 TIGR00900 2A0121 H+ Antiporter 100.0 1.9E-31 4.2E-36 260.6 30.6 351 110-501 5-365 (365)
49 TIGR00881 2A0104 phosphoglycer 100.0 3.2E-32 7E-37 267.5 23.7 371 113-506 4-379 (379)
50 PRK15403 multidrug efflux syst 100.0 2E-30 4.3E-35 255.6 35.6 372 101-516 13-389 (413)
51 COG2223 NarK Nitrate/nitrite t 100.0 4.3E-31 9.4E-36 242.6 26.4 377 106-526 16-403 (417)
52 TIGR00710 efflux_Bcr_CflA drug 100.0 1.9E-30 4.2E-35 255.4 32.9 343 113-498 14-360 (385)
53 TIGR00897 2A0118 polyol permea 100.0 3.3E-30 7.1E-35 254.0 34.4 360 122-522 31-399 (402)
54 PRK09874 drug efflux system pr 100.0 1.5E-30 3.2E-35 258.1 32.2 368 110-524 20-398 (408)
55 TIGR00899 2A0120 sugar efflux 100.0 3.4E-30 7.5E-35 252.6 33.1 359 112-521 5-371 (375)
56 PRK11043 putative transporter; 100.0 5.3E-30 1.1E-34 253.1 34.0 344 113-502 15-360 (401)
57 KOG0255 Synaptic vesicle trans 100.0 2.2E-30 4.8E-35 264.0 31.8 386 132-535 111-503 (521)
58 PRK10473 multidrug efflux syst 100.0 5.3E-30 1.2E-34 252.3 32.8 352 109-513 8-363 (392)
59 PRK10133 L-fucose transporter; 100.0 3.1E-30 6.7E-35 255.4 31.2 367 103-517 25-426 (438)
60 PRK11195 lysophospholipid tran 100.0 4.7E-30 1E-34 251.4 32.2 369 110-524 9-380 (393)
61 cd06174 MFS The Major Facilita 100.0 7.8E-30 1.7E-34 247.8 33.2 342 109-521 4-349 (352)
62 PF07690 MFS_1: Major Facilita 100.0 6.2E-31 1.3E-35 255.6 25.0 344 110-490 2-352 (352)
63 KOG2532 Permease of the major 100.0 1.7E-30 3.7E-35 253.3 26.3 363 132-523 66-446 (466)
64 TIGR00885 fucP L-fucose:H+ sym 100.0 1.8E-29 4E-34 247.6 30.3 356 106-512 5-400 (410)
65 TIGR00883 2A0106 metabolite-pr 100.0 1.9E-29 4.2E-34 249.1 30.0 360 114-512 3-389 (394)
66 PRK11646 multidrug resistance 100.0 3.9E-29 8.5E-34 245.5 31.7 354 115-519 21-383 (400)
67 PRK11010 ampG muropeptide tran 100.0 7.5E-29 1.6E-33 248.9 32.5 372 111-523 19-402 (491)
68 PRK10054 putative transporter; 100.0 4E-29 8.7E-34 245.0 29.7 363 112-521 15-381 (395)
69 KOG2533 Permease of the major 100.0 8E-30 1.7E-34 248.9 21.8 378 103-508 44-440 (495)
70 TIGR00896 CynX cyanate transpo 100.0 1.4E-28 3E-33 238.8 30.0 331 119-501 15-350 (355)
71 PRK11102 bicyclomycin/multidru 100.0 1.6E-28 3.5E-33 240.8 29.8 333 118-492 5-342 (377)
72 TIGR00902 2A0127 phenyl propri 100.0 5.7E-28 1.2E-32 236.4 32.1 358 110-519 10-374 (382)
73 PRK11652 emrD multidrug resist 100.0 7.5E-28 1.6E-32 237.2 32.7 342 111-499 15-360 (394)
74 KOG2504 Monocarboxylate transp 100.0 2.2E-29 4.8E-34 248.7 20.3 405 101-522 43-474 (509)
75 TIGR00889 2A0110 nucleoside tr 100.0 8.8E-28 1.9E-32 236.8 30.9 373 110-529 8-407 (418)
76 PRK15011 sugar efflux transpor 100.0 2.3E-27 5E-32 233.1 32.8 355 113-521 24-388 (393)
77 PRK09528 lacY galactoside perm 100.0 7.8E-28 1.7E-32 238.8 28.9 373 114-526 20-405 (420)
78 TIGR00886 2A0108 nitrite extru 100.0 7.8E-28 1.7E-32 235.0 25.7 344 109-485 6-365 (366)
79 PRK11902 ampG muropeptide tran 100.0 5.7E-27 1.2E-31 231.1 31.9 368 111-522 6-388 (402)
80 PRK11128 putative 3-phenylprop 100.0 6.7E-27 1.5E-31 229.0 31.3 354 113-518 13-373 (382)
81 TIGR00882 2A0105 oligosacchari 100.0 3.1E-26 6.7E-31 225.7 30.0 370 112-521 10-392 (396)
82 PRK08633 2-acyl-glycerophospho 100.0 5E-26 1.1E-30 254.7 33.0 341 122-498 28-383 (1146)
83 PRK10207 dipeptide/tripeptide 100.0 4.5E-26 9.8E-31 227.5 29.0 387 124-522 35-474 (489)
84 COG0738 FucP Fucose permease [ 100.0 4.3E-26 9.3E-31 208.2 25.9 362 106-517 15-402 (422)
85 PRK06814 acylglycerophosphoeth 100.0 3E-26 6.4E-31 255.4 30.2 377 106-515 17-413 (1140)
86 COG2807 CynX Cyanate permease 100.0 1.8E-25 4E-30 200.8 28.9 368 103-522 11-383 (395)
87 KOG3764 Vesicular amine transp 99.9 2.9E-28 6.2E-33 220.4 7.8 341 142-523 107-453 (464)
88 TIGR00924 yjdL_sub1_fam amino 99.9 6.4E-25 1.4E-29 219.4 32.5 405 110-525 16-469 (475)
89 TIGR00792 gph sugar (Glycoside 99.9 6.4E-26 1.4E-30 227.0 25.3 335 126-503 22-384 (437)
90 KOG2615 Permease of the major 99.9 2.4E-26 5.2E-31 206.7 19.5 350 141-516 68-432 (451)
91 PF05977 MFS_3: Transmembrane 99.9 5.5E-25 1.2E-29 218.7 29.3 368 110-521 16-391 (524)
92 TIGR00805 oat sodium-independe 99.9 3.7E-25 7.9E-30 227.0 27.8 302 107-421 36-415 (633)
93 PF06609 TRI12: Fungal trichot 99.9 3.1E-24 6.8E-29 212.0 33.1 380 103-497 43-465 (599)
94 TIGR00806 rfc RFC reduced fola 99.9 9.1E-26 2E-30 213.6 19.3 365 107-492 30-408 (511)
95 TIGR00901 2A0125 AmpG-related 99.9 5.5E-25 1.2E-29 213.8 24.7 324 121-483 5-355 (356)
96 PTZ00207 hypothetical protein; 99.9 5.9E-24 1.3E-28 211.7 31.8 405 101-527 25-555 (591)
97 TIGR02718 sider_RhtX_FptX side 99.9 1.6E-23 3.5E-28 205.9 32.2 370 107-519 4-386 (390)
98 PRK09584 tppB putative tripept 99.9 1.7E-23 3.7E-28 210.4 29.2 384 126-521 44-476 (500)
99 TIGR01301 GPH_sucrose GPH fami 99.9 9.4E-22 2E-26 192.2 28.4 391 110-529 10-476 (477)
100 PF03825 Nuc_H_symport: Nucleo 99.9 4E-21 8.8E-26 185.8 30.2 373 110-527 8-398 (400)
101 PRK09669 putative symporter Ya 99.9 1.7E-21 3.7E-26 194.6 26.2 335 125-503 31-392 (444)
102 KOG4686 Predicted sugar transp 99.9 1.5E-23 3.3E-28 180.6 8.6 388 101-525 41-444 (459)
103 PRK15462 dipeptide/tripeptide 99.9 2.3E-20 5.1E-25 183.2 32.2 362 126-496 32-437 (493)
104 KOG2563 Permease of the major 99.9 1.6E-20 3.4E-25 174.0 26.2 400 96-533 37-459 (480)
105 TIGR00788 fbt folate/biopterin 99.9 2.9E-21 6.3E-26 192.5 21.9 380 110-512 32-431 (468)
106 PF01306 LacY_symp: LacY proto 99.9 6.4E-21 1.4E-25 180.3 20.0 374 112-529 15-405 (412)
107 PRK10429 melibiose:sodium symp 99.9 3.5E-20 7.7E-25 186.2 24.8 353 114-503 16-397 (473)
108 PF13347 MFS_2: MFS/sugar tran 99.9 2.1E-19 4.5E-24 178.7 28.7 338 125-503 23-388 (428)
109 PF11700 ATG22: Vacuole efflux 99.9 1.5E-18 3.2E-23 171.1 33.4 352 143-522 72-466 (477)
110 PRK11462 putative transporter; 99.8 3.3E-18 7.1E-23 170.6 27.6 333 126-503 32-391 (460)
111 PRK09848 glucuronide transport 99.8 4.2E-18 9.2E-23 170.5 26.8 332 126-503 31-392 (448)
112 TIGR01272 gluP glucose/galacto 99.8 2.2E-18 4.8E-23 162.3 22.1 275 189-510 5-301 (310)
113 COG3104 PTR2 Dipeptide/tripept 99.8 3.8E-17 8.1E-22 154.6 26.6 397 124-524 42-487 (498)
114 COG2270 Permeases of the major 99.8 9.1E-17 2E-21 148.6 27.5 353 139-530 56-434 (438)
115 COG2211 MelB Na+/melibiose sym 99.8 6.4E-17 1.4E-21 154.7 27.5 337 126-502 35-399 (467)
116 KOG2325 Predicted transporter/ 99.8 2.4E-18 5.2E-23 164.7 15.8 392 103-524 33-475 (488)
117 KOG3626 Organic anion transpor 99.7 2.7E-15 5.8E-20 149.8 24.4 305 104-421 97-477 (735)
118 PF03209 PUCC: PUCC protein; 99.7 7.2E-15 1.6E-19 136.7 24.7 330 130-499 6-363 (403)
119 PRK10642 proline/glycine betai 99.7 8.6E-16 1.9E-20 155.4 15.7 178 126-305 272-458 (490)
120 PF03137 OATP: Organic Anion T 99.6 6E-17 1.3E-21 162.1 -0.2 382 109-501 8-516 (539)
121 TIGR00880 2_A_01_02 Multidrug 99.6 7.2E-15 1.6E-19 121.9 8.3 134 147-281 4-137 (141)
122 TIGR00889 2A0110 nucleoside tr 99.6 3.1E-14 6.8E-19 140.6 13.3 159 126-286 230-407 (418)
123 PRK15011 sugar efflux transpor 99.6 2E-13 4.3E-18 134.3 18.1 154 126-283 238-392 (393)
124 TIGR01299 synapt_SV2 synaptic 99.5 1.7E-13 3.7E-18 141.7 16.4 140 145-286 599-738 (742)
125 PRK09528 lacY galactoside perm 99.5 4.5E-14 9.8E-19 140.4 11.7 143 134-279 257-400 (420)
126 PF03092 BT1: BT1 family; Int 99.5 1.5E-13 3.3E-18 135.3 14.6 354 124-501 10-382 (433)
127 KOG2816 Predicted transporter 99.5 9.8E-13 2.1E-17 128.5 18.3 357 105-500 23-393 (463)
128 PRK11551 putative 3-hydroxyphe 99.5 2.9E-13 6.3E-18 134.2 14.8 154 126-281 242-395 (406)
129 TIGR00890 2A0111 Oxalate/Forma 99.5 3.2E-13 6.8E-18 132.5 14.0 146 126-274 227-374 (377)
130 PRK05122 major facilitator sup 99.5 7E-13 1.5E-17 131.0 15.6 153 126-283 238-390 (399)
131 cd06174 MFS The Major Facilita 99.5 1.2E-12 2.6E-17 127.0 16.7 163 115-280 186-350 (352)
132 TIGR00899 2A0120 sugar efflux 99.5 2.2E-12 4.8E-17 126.4 17.1 151 128-282 224-374 (375)
133 PF05631 DUF791: Protein of un 99.5 1.1E-11 2.4E-16 113.8 19.8 257 124-415 54-319 (354)
134 PRK12382 putative transporter; 99.4 2.9E-12 6.3E-17 126.3 16.4 149 126-279 238-386 (392)
135 TIGR00902 2A0127 phenyl propri 99.4 3.8E-12 8.2E-17 124.8 15.9 147 126-277 227-374 (382)
136 PRK09556 uhpT sugar phosphate 99.4 7.3E-12 1.6E-16 126.2 17.0 154 124-279 278-446 (467)
137 COG2814 AraJ Arabinose efflux 99.4 9.8E-12 2.1E-16 117.0 16.5 172 345-525 16-189 (394)
138 TIGR00892 2A0113 monocarboxyla 99.4 1.9E-12 4.2E-17 129.6 12.7 149 126-276 263-415 (455)
139 PRK09874 drug efflux system pr 99.4 2.4E-12 5.1E-17 127.8 12.9 156 123-279 238-395 (408)
140 TIGR00893 2A0114 d-galactonate 99.4 7.9E-12 1.7E-16 123.5 16.4 153 122-278 233-395 (399)
141 TIGR02332 HpaX 4-hydroxyphenyl 99.4 2.1E-11 4.5E-16 120.6 19.2 176 344-528 10-193 (412)
142 PRK10054 putative transporter; 99.4 2.1E-11 4.5E-16 119.9 17.9 159 358-526 23-184 (395)
143 TIGR00895 2A0115 benzoate tran 99.4 1.5E-11 3.3E-16 121.5 16.9 163 356-527 31-195 (398)
144 PRK10213 nepI ribonucleoside t 99.4 2.8E-11 6.1E-16 118.9 18.4 157 362-527 40-198 (394)
145 PRK09952 shikimate transporter 99.4 1E-11 2.2E-16 123.9 15.4 157 126-284 273-435 (438)
146 PRK03545 putative arabinose tr 99.4 1.6E-11 3.4E-16 120.9 16.6 149 126-279 228-377 (390)
147 PRK03699 putative transporter; 99.4 9.5E-12 2.1E-16 122.6 15.0 153 125-281 226-379 (394)
148 PRK09705 cynX putative cyanate 99.4 2.4E-11 5.1E-16 119.5 16.9 158 125-286 226-386 (393)
149 PRK03633 putative MFS family t 99.4 1.2E-11 2.7E-16 121.2 14.9 149 126-280 222-370 (381)
150 TIGR00710 efflux_Bcr_CflA drug 99.4 2.3E-11 5E-16 119.7 16.8 162 358-528 21-184 (385)
151 TIGR00883 2A0106 metabolite-pr 99.4 5.1E-12 1.1E-16 124.7 12.1 147 124-272 239-391 (394)
152 PRK11663 regulatory protein Uh 99.3 3.7E-11 7.9E-16 119.9 17.7 158 359-525 40-199 (434)
153 TIGR00891 2A0112 putative sial 99.3 6.3E-12 1.4E-16 124.6 12.1 138 126-266 261-400 (405)
154 TIGR00879 SP MFS transporter, 99.3 1.6E-11 3.4E-16 124.7 14.3 161 122-285 302-474 (481)
155 TIGR00711 efflux_EmrB drug res 99.3 2.1E-11 4.5E-16 124.0 14.5 163 356-527 16-180 (485)
156 PRK14995 methyl viologen resis 99.3 4.2E-11 9.2E-16 121.4 16.6 175 344-527 8-185 (495)
157 PRK10473 multidrug efflux syst 99.3 4.6E-11 9.9E-16 117.8 16.1 164 356-528 17-182 (392)
158 PF01770 Folate_carrier: Reduc 99.3 1.6E-10 3.4E-15 109.4 18.7 366 105-486 6-389 (412)
159 PRK10489 enterobactin exporter 99.3 3.1E-11 6.7E-16 120.0 14.4 158 125-285 244-403 (417)
160 PLN00028 nitrate transmembrane 99.3 2.1E-10 4.6E-15 115.5 20.0 157 358-524 52-219 (476)
161 PRK15403 multidrug efflux syst 99.3 9.4E-11 2E-15 115.9 16.9 155 365-528 39-195 (413)
162 TIGR00897 2A0118 polyol permea 99.3 8.4E-11 1.8E-15 116.1 16.5 152 124-280 242-399 (402)
163 PRK03893 putative sialic acid 99.3 4.2E-11 9.1E-16 122.1 14.6 145 125-272 296-443 (496)
164 COG2271 UhpC Sugar phosphate p 99.3 3.2E-11 6.9E-16 112.1 12.2 177 342-527 29-209 (448)
165 PRK10077 xylE D-xylose transpo 99.3 1.5E-10 3.3E-15 117.4 18.5 159 124-285 291-461 (479)
166 PRK10091 MFS transport protein 99.3 7.8E-11 1.7E-15 115.5 15.8 161 359-528 20-182 (382)
167 PRK10504 putative transporter; 99.3 1.4E-10 3.1E-15 117.2 18.2 161 357-526 25-187 (471)
168 PF07690 MFS_1: Major Facilita 99.3 3.6E-11 7.8E-16 116.7 13.3 158 358-524 12-172 (352)
169 PRK15402 multidrug efflux syst 99.3 1.4E-10 3E-15 114.9 17.6 178 342-528 13-192 (406)
170 PRK11010 ampG muropeptide tran 99.3 2.9E-10 6.3E-15 114.7 19.3 155 126-283 245-404 (491)
171 PRK11652 emrD multidrug resist 99.3 2.1E-10 4.5E-15 113.2 17.8 180 339-528 6-187 (394)
172 TIGR00900 2A0121 H+ Antiporter 99.3 1.4E-10 3E-15 113.2 16.4 159 360-522 17-177 (365)
173 PRK11646 multidrug resistance 99.3 2.2E-10 4.8E-15 112.8 17.8 157 360-526 29-187 (400)
174 TIGR00887 2A0109 phosphate:H+ 99.3 5.8E-11 1.3E-15 120.8 13.7 162 125-286 309-493 (502)
175 KOG1330 Sugar transporter/spin 99.3 9.5E-12 2.1E-16 116.7 7.2 180 348-536 39-221 (493)
176 PRK11128 putative 3-phenylprop 99.3 1.3E-10 2.7E-15 114.1 15.4 144 127-275 228-372 (382)
177 PRK15462 dipeptide/tripeptide 99.3 2.9E-10 6.3E-15 112.4 17.8 155 358-520 25-185 (493)
178 TIGR00882 2A0105 oligosacchari 99.2 8.2E-11 1.8E-15 116.1 13.6 140 135-277 250-390 (396)
179 TIGR00903 2A0129 major facilit 99.2 2.2E-10 4.8E-15 110.9 15.7 161 358-528 7-169 (368)
180 PRK11273 glpT sn-glycerol-3-ph 99.2 1.7E-10 3.6E-15 115.8 15.4 152 125-279 274-432 (452)
181 PF11700 ATG22: Vacuole efflux 99.2 2.2E-10 4.7E-15 113.6 15.8 169 113-284 292-470 (477)
182 PRK12307 putative sialic acid 99.2 3.7E-10 8.1E-15 112.7 17.1 146 357-511 33-180 (426)
183 TIGR00924 yjdL_sub1_fam amino 99.2 3.2E-10 7E-15 113.8 16.6 154 358-520 26-188 (475)
184 TIGR00881 2A0104 phosphoglycer 99.2 7.4E-11 1.6E-15 115.8 11.8 161 358-527 11-174 (379)
185 PRK10207 dipeptide/tripeptide 99.2 4.6E-10 1E-14 112.8 17.2 152 358-517 31-187 (489)
186 PRK11043 putative transporter; 99.2 6.3E-10 1.4E-14 110.1 17.8 152 365-525 29-182 (401)
187 PRK11102 bicyclomycin/multidru 99.2 2.6E-10 5.6E-15 111.9 14.5 157 362-527 11-169 (377)
188 PRK09584 tppB putative tripept 99.2 7.4E-10 1.6E-14 111.9 17.5 152 358-517 37-194 (500)
189 PF05977 MFS_3: Transmembrane 99.2 3.6E-10 7.9E-15 113.2 14.6 151 124-277 238-389 (524)
190 KOG3098 Uncharacterized conser 99.2 1.6E-08 3.4E-13 97.7 25.0 315 147-494 56-409 (461)
191 TIGR00712 glpT glycerol-3-phos 99.2 2.3E-10 5E-15 114.3 13.1 160 361-526 46-208 (438)
192 TIGR00886 2A0108 nitrite extru 99.2 1.3E-09 2.8E-14 106.4 17.9 157 357-522 16-186 (366)
193 PF06813 Nodulin-like: Nodulin 99.2 4.1E-09 8.9E-14 94.0 19.1 174 103-282 2-182 (250)
194 KOG2504 Monocarboxylate transp 99.2 2.5E-10 5.4E-15 113.8 12.2 173 108-282 302-476 (509)
195 TIGR00894 2A0114euk Na(+)-depe 99.1 5.5E-10 1.2E-14 112.7 14.0 148 372-526 71-221 (465)
196 TIGR00880 2_A_01_02 Multidrug 99.1 5E-10 1.1E-14 92.6 11.4 134 384-526 7-140 (141)
197 PRK10406 alpha-ketoglutarate t 99.1 8.5E-10 1.8E-14 110.1 14.4 153 126-281 265-423 (432)
198 TIGR00898 2A0119 cation transp 99.1 2.1E-10 4.5E-15 117.2 10.1 139 145-286 359-499 (505)
199 PRK15034 nitrate/nitrite trans 99.1 7.8E-09 1.7E-13 101.2 20.1 162 361-527 53-235 (462)
200 COG2270 Permeases of the major 99.1 1.2E-09 2.7E-14 101.8 13.6 179 103-284 253-431 (438)
201 TIGR02718 sider_RhtX_FptX side 99.1 1.6E-09 3.4E-14 106.8 15.2 149 126-277 230-386 (390)
202 PRK15075 citrate-proton sympor 99.1 2E-09 4.3E-14 107.5 15.8 134 124-260 258-397 (434)
203 PRK08633 2-acyl-glycerophospho 99.1 1.7E-09 3.7E-14 122.0 16.7 145 126-272 255-400 (1146)
204 TIGR01272 gluP glucose/galacto 99.1 2.7E-09 5.9E-14 100.7 14.9 138 126-269 163-302 (310)
205 COG2223 NarK Nitrate/nitrite t 99.1 4.4E-09 9.5E-14 98.2 15.5 160 359-526 31-195 (417)
206 TIGR00792 gph sugar (Glycoside 99.1 9.1E-10 2E-14 110.3 11.8 117 137-255 255-379 (437)
207 TIGR00885 fucP L-fucose:H+ sym 99.1 7.7E-09 1.7E-13 101.9 17.4 157 358-520 19-203 (410)
208 TIGR00896 CynX cyanate transpo 99.0 2.7E-09 5.9E-14 103.6 13.2 134 125-261 218-353 (355)
209 PRK06814 acylglycerophosphoeth 99.0 3.5E-09 7.5E-14 119.1 15.6 145 127-273 249-413 (1140)
210 PF06609 TRI12: Fungal trichot 99.0 3.6E-09 7.7E-14 105.9 13.7 177 337-523 39-216 (599)
211 KOG0637 Sucrose transporter an 99.0 6.9E-09 1.5E-13 97.5 14.2 134 118-253 46-202 (498)
212 PF06963 FPN1: Ferroportin1 (F 99.0 9E-07 2E-11 85.9 29.0 372 108-489 6-408 (432)
213 PRK11902 ampG muropeptide tran 99.0 5.4E-09 1.2E-13 103.3 14.3 146 127-279 233-387 (402)
214 KOG0253 Synaptic vesicle trans 99.0 2.1E-09 4.5E-14 97.8 9.7 130 153-285 393-522 (528)
215 KOG3762 Predicted transporter 99.0 8.4E-10 1.8E-14 105.4 7.3 155 358-521 387-544 (618)
216 KOG0569 Permease of the major 99.0 1.4E-08 3E-13 99.0 15.2 161 122-286 288-459 (485)
217 TIGR00901 2A0125 AmpG-related 99.0 1.3E-08 2.9E-13 98.8 15.4 161 360-527 6-181 (356)
218 TIGR00926 2A1704 Peptide:H+ sy 99.0 1.6E-07 3.5E-12 96.5 23.7 154 124-279 8-179 (654)
219 PRK11195 lysophospholipid tran 99.0 3.4E-08 7.5E-13 97.1 18.3 141 128-271 230-371 (393)
220 TIGR00805 oat sodium-independe 99.0 8.2E-09 1.8E-13 106.8 13.5 177 345-522 36-279 (633)
221 PF03825 Nuc_H_symport: Nucleo 98.9 2.3E-08 5.1E-13 97.3 15.6 156 121-278 224-391 (400)
222 PRK10133 L-fucose transporter; 98.9 5.6E-08 1.2E-12 96.8 18.6 136 356-497 40-177 (438)
223 KOG3764 Vesicular amine transp 98.9 1.9E-09 4.1E-14 99.3 7.3 144 378-530 109-253 (464)
224 PF01306 LacY_symp: LacY proto 98.9 1.6E-09 3.5E-14 103.3 6.5 137 143-280 261-398 (412)
225 PTZ00207 hypothetical protein; 98.9 7.5E-08 1.6E-12 97.2 18.6 165 356-525 41-206 (591)
226 TIGR00806 rfc RFC reduced fola 98.9 8.1E-08 1.7E-12 92.5 17.6 137 358-505 42-181 (511)
227 TIGR00769 AAA ADP/ATP carrier 98.9 9.4E-06 2E-10 79.8 32.1 266 126-417 25-345 (472)
228 TIGR01301 GPH_sucrose GPH fami 98.9 9.5E-08 2.1E-12 94.3 17.8 179 348-528 11-222 (477)
229 KOG2615 Permease of the major 98.9 7.7E-09 1.7E-13 94.7 9.3 109 380-498 73-181 (451)
230 COG0477 ProP Permeases of the 98.9 3E-08 6.4E-13 94.4 13.7 158 114-273 12-176 (338)
231 PF13347 MFS_2: MFS/sugar tran 98.9 5.8E-08 1.3E-12 96.8 15.1 138 114-254 235-382 (428)
232 KOG3574 Acetyl-CoA transporter 98.8 8.7E-07 1.9E-11 81.3 20.7 139 111-254 38-193 (510)
233 KOG4332 Predicted sugar transp 98.8 5.8E-08 1.3E-12 84.4 11.7 357 122-519 55-426 (454)
234 KOG4686 Predicted sugar transp 98.8 1.4E-07 3E-12 82.9 14.0 128 127-258 288-416 (459)
235 PRK09848 glucuronide transport 98.8 5.8E-08 1.3E-12 97.4 12.6 127 126-254 250-386 (448)
236 PF02487 CLN3: CLN3 protein; 98.8 5.2E-07 1.1E-11 85.8 17.5 133 144-281 62-194 (402)
237 COG3104 PTR2 Dipeptide/tripept 98.7 1E-07 2.2E-12 91.4 11.5 181 338-525 21-207 (498)
238 COG2807 CynX Cyanate permease 98.7 8.4E-07 1.8E-11 81.4 16.9 156 122-280 226-383 (395)
239 KOG2532 Permease of the major 98.7 3.1E-07 6.7E-12 90.7 14.9 141 379-526 77-218 (466)
240 PRK10429 melibiose:sodium symp 98.7 2E-07 4.3E-12 94.1 12.5 129 124-254 251-391 (473)
241 KOG3762 Predicted transporter 98.7 6.6E-08 1.4E-12 92.8 8.3 164 114-280 381-545 (618)
242 PF06779 DUF1228: Protein of u 98.7 1E-07 2.2E-12 68.4 7.1 81 116-198 4-84 (85)
243 KOG0255 Synaptic vesicle trans 98.7 2.8E-07 6.2E-12 94.4 13.2 135 380-527 123-257 (521)
244 COG0738 FucP Fucose permease [ 98.6 1.4E-06 3.1E-11 81.2 16.1 158 359-522 30-208 (422)
245 KOG3810 Micronutrient transpor 98.6 6.8E-07 1.5E-11 81.0 12.8 368 133-521 35-418 (433)
246 KOG0254 Predicted transporter 98.6 8.8E-07 1.9E-11 90.3 15.3 139 378-527 92-232 (513)
247 PRK09669 putative symporter Ya 98.6 5.9E-07 1.3E-11 90.1 13.7 111 144-254 267-386 (444)
248 KOG2533 Permease of the major 98.6 9.7E-07 2.1E-11 87.5 14.2 141 380-529 86-232 (495)
249 PF03209 PUCC: PUCC protein; 98.6 1.4E-06 3.1E-11 82.0 13.8 151 126-278 231-394 (403)
250 PF06813 Nodulin-like: Nodulin 98.6 8E-07 1.7E-11 79.4 11.6 143 352-499 12-157 (250)
251 KOG0252 Inorganic phosphate tr 98.5 3.2E-07 7E-12 86.5 7.7 179 105-286 305-502 (538)
252 TIGR00788 fbt folate/biopterin 98.5 2.5E-07 5.4E-12 92.8 7.6 123 132-256 281-413 (468)
253 KOG1237 H+/oligopeptide sympor 98.5 9.8E-05 2.1E-09 74.8 25.4 156 121-279 55-242 (571)
254 PF05978 UNC-93: Ion channel r 98.4 1.1E-05 2.4E-10 66.5 13.1 109 144-253 40-148 (156)
255 PF00083 Sugar_tr: Sugar (and 98.4 5.8E-09 1.3E-13 105.0 -7.5 156 125-286 274-441 (451)
256 KOG2816 Predicted transporter 98.4 1E-05 2.2E-10 79.8 15.1 136 385-532 72-207 (463)
257 PF05631 DUF791: Protein of un 98.4 3.5E-05 7.6E-10 71.6 17.1 158 364-530 56-222 (354)
258 PRK11462 putative transporter; 98.2 3.8E-05 8.2E-10 77.1 16.3 126 126-253 250-384 (460)
259 COG2211 MelB Na+/melibiose sym 98.2 1.4E-05 2.9E-10 77.7 12.3 128 124-252 256-392 (467)
260 TIGR00926 2A1704 Peptide:H+ sy 98.2 4.5E-05 9.8E-10 78.8 16.1 156 366-522 12-180 (654)
261 PF12832 MFS_1_like: MFS_1 lik 98.1 1.2E-05 2.7E-10 57.3 7.3 68 112-181 8-75 (77)
262 PF13000 Acatn: Acetyl-coenzym 98.1 4.3E-05 9.4E-10 73.5 12.2 142 109-254 5-178 (544)
263 COG3202 ATP/ADP translocase [E 98.1 0.00095 2.1E-08 64.4 21.0 142 108-255 31-209 (509)
264 KOG1479 Nucleoside transporter 98.1 0.00099 2.2E-08 63.3 20.9 110 113-226 27-148 (406)
265 TIGR00939 2a57 Equilibrative N 98.0 0.00042 9.2E-09 68.3 18.2 111 380-492 312-427 (437)
266 PF03219 TLC: TLC ATP/ADP tran 97.9 0.0025 5.4E-08 63.4 21.1 112 144-255 61-205 (491)
267 PF00854 PTR2: POT family; In 97.9 0.00014 3E-09 71.0 12.4 108 172-280 2-121 (372)
268 KOG2325 Predicted transporter/ 97.9 0.00011 2.3E-09 71.8 10.8 147 378-529 74-234 (488)
269 PF05978 UNC-93: Ion channel r 97.6 0.0032 7E-08 52.0 13.5 108 380-497 42-149 (156)
270 PF03092 BT1: BT1 family; Int 97.6 0.0011 2.5E-08 65.7 12.9 155 366-526 14-177 (433)
271 KOG2563 Permease of the major 97.5 0.0014 3E-08 62.6 12.2 160 338-500 41-203 (480)
272 PF02487 CLN3: CLN3 protein; 97.5 0.00087 1.9E-08 64.2 11.0 106 144-253 284-394 (402)
273 PF07672 MFS_Mycoplasma: Mycop 97.5 0.00099 2.1E-08 58.9 10.2 243 226-494 2-263 (267)
274 PF12832 MFS_1_like: MFS_1 lik 97.4 0.0019 4.1E-08 46.1 8.6 64 351-414 9-74 (77)
275 PRK03612 spermidine synthase; 97.3 0.0098 2.1E-07 60.3 15.6 143 129-275 40-190 (521)
276 PF00854 PTR2: POT family; In 96.7 0.0075 1.6E-07 58.9 9.0 119 406-525 2-124 (372)
277 TIGR00769 AAA ADP/ATP carrier 96.6 0.11 2.5E-06 51.5 15.9 109 390-498 59-190 (472)
278 PF01733 Nucleoside_tran: Nucl 96.5 0.00049 1.1E-08 65.0 -0.6 111 380-492 187-303 (309)
279 PF03137 OATP: Organic Anion T 96.3 0.00088 1.9E-08 68.0 -0.7 149 349-497 10-201 (539)
280 PF06963 FPN1: Ferroportin1 (F 96.2 0.15 3.3E-06 50.1 14.2 138 115-254 269-416 (432)
281 KOG3098 Uncharacterized conser 96.1 0.15 3.2E-06 50.2 13.4 101 150-251 288-409 (461)
282 COG0477 ProP Permeases of the 96.0 0.25 5.4E-06 46.3 15.1 142 362-510 22-171 (338)
283 KOG3626 Organic anion transpor 95.9 0.07 1.5E-06 55.2 10.6 179 347-525 102-344 (735)
284 KOG3097 Predicted membrane pro 95.8 1.6 3.5E-05 40.5 20.7 72 151-223 68-139 (390)
285 TIGR00939 2a57 Equilibrative N 95.7 0.099 2.1E-06 51.8 10.9 60 192-251 370-429 (437)
286 PF01770 Folate_carrier: Reduc 95.2 0.44 9.6E-06 46.2 12.9 148 362-519 24-177 (412)
287 PRK03612 spermidine synthase; 95.2 0.42 9.2E-06 48.6 13.5 48 471-518 143-191 (521)
288 KOG1237 H+/oligopeptide sympor 95.2 0.97 2.1E-05 46.4 16.1 161 362-522 58-243 (571)
289 PF06779 DUF1228: Protein of u 94.0 0.79 1.7E-05 33.2 8.7 66 360-425 10-77 (85)
290 KOG0637 Sucrose transporter an 92.7 0.16 3.5E-06 49.0 4.7 130 144-273 335-487 (498)
291 KOG4332 Predicted sugar transp 90.3 0.32 7E-06 43.4 3.6 154 368-530 63-226 (454)
292 PF01733 Nucleoside_tran: Nucl 90.3 0.079 1.7E-06 50.1 -0.2 107 146-252 187-306 (309)
293 PF03219 TLC: TLC ATP/ADP tran 89.7 25 0.00053 35.6 16.9 112 387-498 71-205 (491)
294 COG3202 ATP/ADP translocase [E 89.2 19 0.0004 35.9 14.7 112 387-498 74-209 (509)
295 PF06912 DUF1275: Protein of u 87.5 19 0.00042 31.6 13.5 41 145-185 50-93 (209)
296 KOG2601 Iron transporter [Inor 87.3 6.2 0.00013 37.5 9.7 162 110-273 33-217 (503)
297 KOG3880 Predicted small molecu 87.2 1.4 3E-05 40.5 5.4 105 144-253 291-401 (409)
298 KOG3880 Predicted small molecu 86.9 0.87 1.9E-05 41.7 4.0 133 144-281 65-198 (409)
299 KOG3574 Acetyl-CoA transporter 86.6 7.6 0.00016 37.2 10.0 47 364-410 52-103 (510)
300 KOG1479 Nucleoside transporter 83.2 48 0.001 32.4 14.9 14 463-476 142-155 (406)
301 PF07672 MFS_Mycoplasma: Mycop 82.3 3.8 8.2E-05 36.9 5.9 101 144-245 144-254 (267)
302 COG4262 Predicted spermidine s 81.8 27 0.00059 33.0 11.2 94 126-221 29-132 (508)
303 KOG3810 Micronutrient transpor 79.4 9.4 0.0002 36.0 7.6 121 132-255 262-384 (433)
304 COG3619 Predicted membrane pro 77.2 52 0.0011 29.2 14.6 102 102-205 10-126 (226)
305 PRK10263 DNA translocase FtsK; 76.6 12 0.00026 41.9 8.6 19 385-403 62-80 (1355)
306 COG5336 Uncharacterized protei 73.8 14 0.0003 27.8 5.6 40 144-183 45-85 (116)
307 COG4769 Predicted membrane pro 68.9 12 0.00027 30.6 4.9 52 150-207 82-133 (181)
308 KOG2881 Predicted membrane pro 67.8 94 0.002 28.0 12.7 33 386-418 251-283 (294)
309 KOG4830 Predicted sugar transp 67.4 1.6 3.5E-05 38.9 -0.3 62 111-174 24-94 (412)
310 PF13000 Acatn: Acetyl-coenzym 67.3 26 0.00057 35.0 7.8 58 197-254 408-465 (544)
311 PF11947 DUF3464: Protein of u 65.1 20 0.00044 29.3 5.6 51 192-245 95-145 (153)
312 COG4262 Predicted spermidine s 64.4 1.4E+02 0.0029 28.6 12.8 23 475-497 141-163 (508)
313 PF02535 Zip: ZIP Zinc transpo 64.1 1.3E+02 0.0028 28.3 12.4 20 102-121 173-192 (317)
314 PF11947 DUF3464: Protein of u 63.8 24 0.00052 28.9 5.7 33 456-488 113-145 (153)
315 PRK02237 hypothetical protein; 60.9 38 0.00083 25.7 5.8 48 144-191 59-106 (109)
316 PF02990 EMP70: Endomembrane p 57.7 1.5E+02 0.0032 30.5 11.7 26 380-405 302-327 (521)
317 PF07857 DUF1632: CEO family ( 54.4 1.7E+02 0.0037 26.6 10.3 23 259-281 113-135 (254)
318 COG5336 Uncharacterized protei 53.5 41 0.00089 25.4 4.9 35 467-501 36-70 (116)
319 KOG2601 Iron transporter [Inor 51.3 2.4E+02 0.0053 27.4 11.3 47 469-515 171-217 (503)
320 PF06027 DUF914: Eukaryotic pr 47.9 1.8E+02 0.0039 27.8 9.7 17 388-404 180-196 (334)
321 TIGR00927 2A1904 K+-dependent 45.5 1.4E+02 0.003 32.8 9.0 34 108-141 464-497 (1096)
322 COG1268 BioY Uncharacterized c 44.6 77 0.0017 27.1 6.0 26 147-172 88-113 (184)
323 PF02694 UPF0060: Uncharacteri 42.7 40 0.00087 25.5 3.5 48 144-191 57-104 (107)
324 TIGR00927 2A1904 K+-dependent 42.5 2.7E+02 0.0057 30.8 10.6 59 126-188 955-1013(1096)
325 PF02632 BioY: BioY family; I 40.8 66 0.0014 26.4 5.0 38 148-185 60-97 (148)
326 PF07760 DUF1616: Protein of u 38.8 1.8E+02 0.0039 27.1 8.2 57 197-254 22-78 (287)
327 PF06638 Strabismus: Strabismu 38.4 3.5E+02 0.0075 27.3 10.0 16 188-203 175-190 (505)
328 TIGR00844 c_cpa1 na(+)/h(+) an 37.3 5.8E+02 0.013 27.8 25.0 35 236-271 107-141 (810)
329 PF11151 DUF2929: Protein of u 33.4 1.5E+02 0.0032 19.7 5.4 46 238-284 10-55 (57)
330 PF09527 ATPase_gene1: Putativ 33.4 1.4E+02 0.003 19.4 5.1 38 148-185 7-45 (55)
331 KOG3814 Signaling protein van 33.3 4.1E+02 0.0088 25.6 9.1 15 190-204 201-215 (531)
332 PF07456 Hpre_diP_synt_I: Hept 32.5 1.5E+02 0.0032 24.3 5.7 52 147-204 67-118 (148)
333 PRK00293 dipZ thiol:disulfide 32.5 6E+02 0.013 26.6 16.6 12 410-421 367-378 (571)
334 PF04346 EutH: Ethanolamine ut 31.6 4.7E+02 0.01 25.1 12.2 106 144-250 50-161 (354)
335 PF10785 NADH-u_ox-rdase: NADH 30.0 1.6E+02 0.0034 21.6 4.9 41 154-194 31-78 (86)
336 PF06800 Sugar_transport: Suga 29.8 4.5E+02 0.0097 24.2 14.5 166 358-532 83-251 (269)
337 KOG3097 Predicted membrane pro 28.4 5.4E+02 0.012 24.7 11.3 33 383-415 66-98 (390)
338 KOG1307 K+-dependent Ca2+/Na+ 28.3 2.5E+02 0.0055 27.8 7.2 48 129-180 449-496 (588)
339 PRK14231 camphor resistance pr 28.0 3.1E+02 0.0068 21.9 10.2 17 237-253 8-24 (129)
340 COG1422 Predicted membrane pro 28.0 4E+02 0.0087 23.1 8.9 27 240-272 32-58 (201)
341 COG1079 Uncharacterized ABC-ty 27.5 5.2E+02 0.011 24.3 9.7 94 155-252 21-116 (304)
342 PF07099 DUF1361: Protein of u 26.3 4E+02 0.0086 22.5 8.8 44 122-165 37-85 (168)
343 PF03547 Mem_trans: Membrane t 25.8 5.8E+02 0.013 24.8 9.9 13 215-227 351-363 (385)
344 KOG2765 Predicted membrane pro 25.4 1.3E+02 0.0027 28.9 4.6 14 165-178 208-221 (416)
345 PF08566 Pam17: Mitochondrial 25.2 3.5E+02 0.0076 22.8 6.6 25 372-396 72-96 (173)
346 PF11833 DUF3353: Protein of u 24.8 2.8E+02 0.0061 24.0 6.4 30 226-255 137-166 (194)
347 COG2119 Predicted membrane pro 24.8 4.4E+02 0.0096 22.5 13.7 37 382-418 141-177 (190)
348 PF12805 FUSC-like: FUSC-like 24.7 2.7E+02 0.0059 25.8 6.9 35 175-209 3-38 (284)
349 PTZ00265 multidrug resistance 24.7 1.3E+03 0.027 27.8 17.9 18 258-275 195-212 (1466)
350 PF11299 DUF3100: Protein of u 24.3 1.3E+02 0.0028 26.7 4.2 89 161-250 127-226 (241)
351 TIGR02230 ATPase_gene1 F0F1-AT 24.2 3.2E+02 0.0069 20.7 5.9 24 159-182 60-84 (100)
352 COG1288 Predicted membrane pro 24.0 4E+02 0.0087 26.4 7.7 37 241-277 199-235 (481)
353 COG2119 Predicted membrane pro 23.9 4.6E+02 0.01 22.4 8.7 59 127-187 122-180 (190)
354 PTZ00370 STEVOR; Provisional 23.0 82 0.0018 28.8 2.9 21 518-538 273-293 (296)
355 PF12273 RCR: Chitin synthesis 22.9 41 0.00088 26.9 0.9 16 261-276 1-16 (130)
356 PF08566 Pam17: Mitochondrial 22.0 1.6E+02 0.0034 24.8 4.1 34 131-164 69-102 (173)
357 PF13829 DUF4191: Domain of un 21.1 2.4E+02 0.0052 25.0 5.2 71 230-304 25-97 (224)
358 COG2233 UraA Xanthine/uracil p 20.7 8.7E+02 0.019 24.4 12.4 118 110-232 22-143 (451)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1e-42 Score=355.92 Aligned_cols=419 Identities=22% Similarity=0.234 Sum_probs=318.6
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhh
Q 009099 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDA 178 (543)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~ 178 (543)
.+..|.++++++++.+.++++...++.++|.+.+++|++..+. +++.+++.++.+++++++|+++||+|||+++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~--g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l 239 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGK--GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL 239 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 3456677777888888899999999999999999999998888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC---
Q 009099 179 VPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG--- 255 (543)
Q Consensus 179 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--- 255 (543)
++++++.++++++++++.++++|++.|++.|+..+...+++.|++|+++|++.+++..+++.+|.++++.++..+..
T Consensus 240 il~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 240 SVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988876644331
Q ss_pred ---------CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhh----HHHH---HHHHH
Q 009099 256 ---------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERV----SEVM---LDLTN 319 (543)
Q Consensus 256 ---------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~ 319 (543)
...+||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.++++...+.. .... ...+.
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 1247999999998888887777888999999999999999998888887665421 0000 00110
Q ss_pred hc--------cCCCCc----------------ccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---
Q 009099 320 AG--------QGSAEP----------------EAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSV--- 372 (543)
Q Consensus 320 ~~--------~~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 372 (543)
.. +..... ..+++++++++..+..++..+.+ +.....++.+..|.|.+++..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~w-f~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVW-FTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000 01355667666655555554444 444455777888888664331
Q ss_pred ---------------------------------------CC-----C---------------------------------
Q 009099 373 ---------------------------------------GI-----E--------------------------------- 375 (543)
Q Consensus 373 ---------------------------------------~~-----~--------------------------------- 375 (543)
|+ .
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 00 0
Q ss_pred -------------------------------c------hhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 376 -------------------------------S------DVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 376 -------------------------------~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
. ......+..++.+++.+++|+++||+|||+++..+.++.+++
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~ 638 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCIS 638 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 0 011244556888999999999999999999999988888888
Q ss_pred HHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 419 MLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
++++.+.. +....++..++++++ ..+..+....+++|++|++.|++++|+.+....+|++++|++.+.+.+
T Consensus 639 ~ll~~~~~--------s~~~ll~~~~l~g~~-~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 639 CFFLSFGN--------SESAMIALLCLFGGL-SIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHc--------cHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766531 112222223333333 333455667789999999999999999999999999999999998877
Q ss_pred hhccccchhhhhHHHHHHHHhhheecccCCCCC
Q 009099 499 KFGISTVYLGFATVCLLAVLYIAVNVVETKGRS 531 (543)
Q Consensus 499 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (543)
. +...+|++.+++.++++++.+ ++||++++.
T Consensus 710 ~-~~~~pf~i~a~~lll~~ll~~-~LPET~~~~ 740 (742)
T TIGR01299 710 I-TKAAPILFASAALACGGLLAL-KLPDTRGQV 740 (742)
T ss_pred h-hhHHHHHHHHHHHHHHHHHHH-hCCCCcccc
Confidence 5 345677777777777666554 458887754
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=324.53 Aligned_cols=440 Identities=33% Similarity=0.596 Sum_probs=367.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhHHHHH--------HHcC--CCcchh--hHHHHHHHHHHHHHHHHHhhHhhhhhh
Q 009099 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLA--------KDLG--IAENTV--LQGWIVSSLLAGATVGSFTGGSLADKF 168 (543)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~--~s~~~~--~~g~~~s~~~l~~~i~~~~~g~l~dr~ 168 (543)
+........+++.+-.+++...+++..+.+. +.+| .++++. ..+.+.+++.+|.++|+++.|+++||+
T Consensus 8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444555556666888888888888765544 3445 333322 468899999999999999999999999
Q ss_pred cccchhhhhhHHHHHHHHHHHH---hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHH
Q 009099 169 GRTRTFQLDAVPLAAGAFLCAT---AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILA 245 (543)
Q Consensus 169 Grr~~~~~~~~~~~i~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 245 (543)
|||..+.++.++..++.+++.+ .++++.++++|++.|+..|.......-++.|..|.+.||....+...+..+|.++
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 9999999999988888777665 4899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcc-cCCCCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHh-cCChHHHHHHHHHHhCchhhHHHHHHH---HHh
Q 009099 246 ALVAGLP-LAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQ-QGKKSEAEKSIQTLYGKERVSEVMLDL---TNA 320 (543)
Q Consensus 246 ~~~~~~~-l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 320 (543)
+..++.. +..+...|++.+.+..+++++..+...++||+|+|+.. +++.+++++.++.+++..+.+++.+.. .++
T Consensus 168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~ 247 (485)
T KOG0569|consen 168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEE 247 (485)
T ss_pred HHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 9777654 33344679999999999999999999999999999988 788899999999999887655444332 223
Q ss_pred ccCCCCcccchhhhhccchhH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHH
Q 009099 321 GQGSAEPEAGWFDLFSSRYWK-VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASS 397 (543)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 397 (543)
++.+++++.+++++++++..+ ...+.+.+....++.+.+.+.+|...++++.|++.... .....++..++..+++.+
T Consensus 248 ~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~ 327 (485)
T KOG0569|consen 248 EELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPF 327 (485)
T ss_pred hccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344778899999986655 45677778888899999999999999999999887744 677788899999999999
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccc-cccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHH
Q 009099 398 LMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLA-PYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVA 476 (543)
Q Consensus 398 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 476 (543)
+.||.|||++++.+..++.+..+++.......... .+..+..+.+.+++...+..|.+|+.+.+.+|++|++.|+.+.+
T Consensus 328 lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 328 LIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 99999999999999999988888877665543322 12233456778888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccCCCCCHHHHHHhcCC
Q 009099 477 LSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGRSLEEIERALNP 541 (543)
Q Consensus 477 ~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (543)
+...+..+..++....+..+.+..|. ..|+++.+.+++..+..++.+||+|+|+.+|+.+++++
T Consensus 408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~ 471 (485)
T KOG0569|consen 408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEK 471 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHh
Confidence 99999999999999999999999996 88888999999999999999999999999998887664
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3e-40 Score=334.40 Aligned_cols=431 Identities=33% Similarity=0.558 Sum_probs=319.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHc--------CCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccch
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDL--------GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRT 173 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~ 173 (543)
....+.++.++.+.++++...+++..|.++++| +.+..+. +++.+++.++..++++++|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLL--GFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 445566667888999999999999999999988 7777777 999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHh------------hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHH
Q 009099 174 FQLDAVPLAAGAFLCATA------------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICV 241 (543)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 241 (543)
++++.++++++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++...+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999998888763 23567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCC-------CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHH
Q 009099 242 GILAALVAGLPLAG-------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVM 314 (543)
Q Consensus 242 G~~~~~~~~~~l~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (543)
|.++++++++.+.. ...+||+.|++.+++.++..+..+++||+|+++..+++.++..+..++.......+...
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQAL 247 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHH
Confidence 99988877654421 23689999999888887777777778999998877766666555555444332222211
Q ss_pred HHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHHH
Q 009099 315 LDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGT 392 (543)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 392 (543)
.+.......+..+ ....+. ..............+.....+....++.|.+.++.|.+.. .......++..+++.
T Consensus 248 ~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~ 323 (479)
T PRK10077 248 QEIKHSLDHGRKT---GGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFT 323 (479)
T ss_pred HHHHHHHHHhhhh---hhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHH
Confidence 1111110000000 011111 1111122222223333344455667788888888877654 334455677888999
Q ss_pred HHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhh
Q 009099 393 AVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRA 472 (543)
Q Consensus 393 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 472 (543)
++.++++||+|||+.++.+..+.+++.+++...... ...........++++.++.....+..+.++.|.+|++.|+
T Consensus 324 ~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 399 (479)
T PRK10077 324 VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT----QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRG 399 (479)
T ss_pred HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc----CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHH
Confidence 999999999999999999998888887776543211 1112233334445555555555677778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHH------HhhccccchhhhhHHHHHHHHhhheecccCCCCCHHHHHHhcCCC
Q 009099 473 KAVALSLGMHWISNFVIGLYFLSVV------NKFGISTVYLGFATVCLLAVLYIAVNVVETKGRSLEEIERALNPV 542 (543)
Q Consensus 473 ~~~g~~~~~~~~g~~~~~~~~g~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (543)
+++|+.+.+.+++.++++.+.+.+. +..++...|.+.+++++++.++.+++.+|+|+++.+|+++++++.
T Consensus 400 ~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 475 (479)
T PRK10077 400 KALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPE 475 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhc
Confidence 9999999999999999877766444 567777888888888888877777788999999999988876653
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=8.6e-41 Score=338.31 Aligned_cols=431 Identities=21% Similarity=0.272 Sum_probs=308.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHc-----CCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccch
Q 009099 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDL-----GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRT 173 (543)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~ 173 (543)
.+..+.++.++.++.+.++++...++...|.+.+++ +.+..+. +++.+.+.+++.++++++|+++||+|||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~ 88 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVS--AAVNGSASIGTLAGQLFFGWLADKLGRKRV 88 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 344556777788889999999999999999887753 2233344 899999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhh------HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHH
Q 009099 174 FQLDAVPLAAGAFLCATAQS------VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (543)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 247 (543)
+.++++++.++.++++++++ ++.++++|+++|++.|...+....+++|++|+++|++++++......+|.++++
T Consensus 89 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 89 YGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998866 789999999999999999999999999999999999999999999999998888
Q ss_pred HhhcccCC----------------------CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChH-HHHHHHHHH
Q 009099 248 VAGLPLAG----------------------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKS-EAEKSIQTL 304 (543)
Q Consensus 248 ~~~~~l~~----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~ 304 (543)
.++..+.. ...+||+.|.+.++++++..+..+++||+|+|+..+++.+ ++.+.+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~ 248 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAV 248 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHH
Confidence 77654321 1247999999988888887777888999999998776654 344444444
Q ss_pred hCchhhHHHHHHHHHhccCCCCcccchhhhhccc---hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchh---
Q 009099 305 YGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSR---YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDV--- 378 (543)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 378 (543)
...+..++ .++.++.++++++.+.+++++++++ ..++..+.....++.....++....+.|.++++.|++...
T Consensus 249 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~ 327 (502)
T TIGR00887 249 LQVKIEAE-PDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATN 327 (502)
T ss_pred hccccccC-cccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccch
Confidence 32211110 0000000001111223577777642 2222233222222222223445556677777777765321
Q ss_pred ----------H-HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 009099 379 ----------A-ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYV 447 (543)
Q Consensus 379 ----------~-~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (543)
. ......++.+++.++.+++.||+|||+.++.+..+.+++++++.+..... ..........++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ 402 (502)
T TIGR00887 328 NAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL-----STHGFLAIYVLAQ 402 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc-----chhHHHHHHHHHH
Confidence 0 12333456677889999999999999998888877777766655432100 0111112222222
Q ss_pred HHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh----------ccccchhhhhHHHHHHH
Q 009099 448 LSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF----------GISTVYLGFATVCLLAV 517 (543)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~----------g~~~~~~~~~~~~~~~~ 517 (543)
..+..+..+..+.+..|.+|++.|+++.|+.+.+++++++++|.+.+.+.+.. ++...|.+++++++++.
T Consensus 403 ~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 482 (502)
T TIGR00887 403 FFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGI 482 (502)
T ss_pred HHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHH
Confidence 23344566677778899999999999999999999999999999999998843 34456777887777776
Q ss_pred HhhheecccCCCCCHHHHHHh
Q 009099 518 LYIAVNVVETKGRSLEEIERA 538 (543)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~ 538 (543)
+. .++.||+++++.||+++|
T Consensus 483 i~-~~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 483 LF-TLLIPETKGKSLEELSGE 502 (502)
T ss_pred HH-heEeccCCCCCHHhhhCC
Confidence 54 467799999998887654
No 5
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6e-39 Score=325.78 Aligned_cols=431 Identities=37% Similarity=0.644 Sum_probs=318.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCC--------cchhhHHHHHHHHHHHHHHHHHhhHhhhhhhccc
Q 009099 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIA--------ENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRT 171 (543)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s--------~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr 171 (543)
++.+....++.+..+...++...+.+..+.+..+++.+ ..+. +++.+++.++..++++++|+++||+|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~g~l~d~~grr 101 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLW--GLVVSIFLVGGFIGALFAGWLSDRFGRK 101 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHH--HHHHHHHHHHHHHHHHHhhHhhhhhhhH
Confidence 34455555666677788888888899999999998887 5566 9999999999999999999999999999
Q ss_pred chhhhhhHHHHHHHHHHHHh---hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHH
Q 009099 172 RTFQLDAVPLAAGAFLCATA---QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALV 248 (543)
Q Consensus 172 ~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 248 (543)
++++++.+++.++.+++.+. .+++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 181 (481)
T TIGR00879 102 KSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYG 181 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999988654 345689999999999999999999999999999999999999999999999999999
Q ss_pred hh---cccCCCCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHH----HHH-HHh
Q 009099 249 AG---LPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVM----LDL-TNA 320 (543)
Q Consensus 249 ~~---~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~ 320 (543)
++ ....+. .+||+.|++.++..++..+..+++||+|++...+++.++..+...+....+..+... ... ...
T Consensus 182 ~~~~~~~~~~~-~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (481)
T TIGR00879 182 FGSGKVSLNNT-LGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKR 260 (481)
T ss_pred HHHHhhcCCCC-ccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHH
Confidence 98 655444 799999999777777766677778999887666655554444333322211110000 000 000
Q ss_pred ccCCCCcccchhhhhccc--hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHH
Q 009099 321 GQGSAEPEAGWFDLFSSR--YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVAS 396 (543)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g 396 (543)
..+.+..+..+.++++.. ..+..++...+..+..........++.+.+.++.|++.... ......++.+++.++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 340 (481)
T TIGR00879 261 SIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAI 340 (481)
T ss_pred HHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 000111111244444322 23344444444444444445667778888888888776433 55566788889999999
Q ss_pred HhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccc--cccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHH
Q 009099 397 SLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLA--PYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKA 474 (543)
Q Consensus 397 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 474 (543)
++.||++||+.+..+..+.+++++++.+........ .......+....++..+++.+..+....+..|.+|++.|+++
T Consensus 341 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 420 (481)
T TIGR00879 341 FLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKG 420 (481)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHH
Confidence 999999999999888777777766665322111100 001233344455555666666667777788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccCCCCCHH
Q 009099 475 VALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGRSLE 533 (543)
Q Consensus 475 ~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (543)
+|+.+...++|++++|.+.+.+.++.|+...|++.+++++++.++.+++.+|+++++.+
T Consensus 421 ~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 421 ISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 99999999999999999999999999999999999999888888877778888776654
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-40 Score=302.86 Aligned_cols=405 Identities=17% Similarity=0.127 Sum_probs=303.9
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchh
Q 009099 95 AKKSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTF 174 (543)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~ 174 (543)
.++.++.++.++..++++....++.+..++.+.|.+.++.++|.+|. |++.+++.++|.++-.+.|.++||.++|+.+
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~l--G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQL--GILGSAFSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence 34455667788888899999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhh--cc
Q 009099 175 QLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAG--LP 252 (543)
Q Consensus 175 ~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~ 252 (543)
.+++++.++.+++++++++.+.+.++.++.|+.+|..+|++...+++|++++|||+..++++.+-++|..+.|++. ++
T Consensus 98 ~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988888887 77
Q ss_pred cCCCCCchHHHHHHhHHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCC---CCcc
Q 009099 253 LAGNPLWWRTMFGLAAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGS---AEPE 328 (543)
Q Consensus 253 l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 328 (543)
+..+ .+||..|++.++++++..+..++ .+|+|+..--.. .++ .+++.. +.+++++++ ..++
T Consensus 178 ~~~~-~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~-ie~-------~~~d~~------e~~~~~~~~~~ls~~~ 242 (448)
T COG2271 178 FAFH-GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP-IEE-------YRGDPL------EIYEEEKENEGLTAWQ 242 (448)
T ss_pred HHhc-cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC-HHH-------hhcCch------hhhhhhccCCCccHHH
Confidence 7655 69999999999999887665554 577775211100 000 000000 000000000 0112
Q ss_pred cchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHHHHHHHHhhhcc--CC
Q 009099 329 AGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGTAVASSLMDRQ--GR 404 (543)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~--g~ 404 (543)
.-++-+++||..|.+.++..+....-++...+.+.|+.. ..+++.. ......+-.++++|.+++|+++||+ ||
T Consensus 243 i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e---~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr 319 (448)
T COG2271 243 IFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE---VKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR 319 (448)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH---hcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc
Confidence 234557788888888888777777655555555555444 2445444 4467778899999999999999995 56
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHH
Q 009099 405 KNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWI 484 (543)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 484 (543)
|....+.+.+....+++.... .+.........++...+++..+...+.-....|..|++..|++.|+...+.++
T Consensus 320 R~p~~~i~~~~i~~~~~~~w~------~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl 393 (448)
T COG2271 320 RGPMALIFMLLITASLVLYWL------APNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYL 393 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHc------CCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHH
Confidence 665544443333333222221 11122333333333333333344444455678999999999999999999999
Q ss_pred -HHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecc
Q 009099 485 -SNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 485 -g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
|.+.+....|.+.|.+||...|.++.+.++++.++.....+
T Consensus 394 ~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 394 IGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999988888888776655444
No 7
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.8e-37 Score=312.48 Aligned_cols=439 Identities=40% Similarity=0.686 Sum_probs=354.8
Q ss_pred hHHHHHHHHHHHHHHHH--HHHhhhhHHHHHHHcCCCcch-----hhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhh
Q 009099 103 LPFVGVACLGAILFGYH--LGVVNGALEYLAKDLGIAENT-----VLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ 175 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~s~~~-----~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~ 175 (543)
........+..+..+++ .+..+++...+.++...+... .+.+|+.+++.++..++++++|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34444455566666665 556677777777754222111 12389999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC
Q 009099 176 LDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (543)
Q Consensus 176 ~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 255 (543)
++.+++.++.+++++++|+++++++|++.|+|.|........+++|..|++.||...+..+....+|..++..++....+
T Consensus 124 ~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999776665543
Q ss_pred CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhC--chhhHHHHHHHHHhc---cCCCCcccc
Q 009099 256 NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYG--KERVSEVMLDLTNAG---QGSAEPEAG 330 (543)
Q Consensus 256 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~ 330 (543)
...+||..+.+..+++++..+..+++||+|+|+.++++.+++++.+..+++ ..+.+.+....+... ....+.+..
T Consensus 204 ~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (513)
T KOG0254|consen 204 VYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKAS 283 (513)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccccccc
Confidence 214899999999999998888888889999999999999999999998887 333333333333111 111222335
Q ss_pred hhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCch-hHHHHHHHHHHHHHHHHHHHhhhccCChhHHH
Q 009099 331 WFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD-VAASALVGAANVFGTAVASSLMDRQGRKNLLT 409 (543)
Q Consensus 331 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 409 (543)
+.+++++...++..++..+..+.++.+++...+|.+.+++..+.+.. .......++..+++.+++.++.||+|||+.++
T Consensus 284 ~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 284 WGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLL 363 (513)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 77777766777888899999999999999999999999999888766 55667777888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccc----ccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHH
Q 009099 410 FSFTGMAASMLLLSLSFTWKVL----APYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWIS 485 (543)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 485 (543)
.+...+.+++++++........ .....+..+...+++...+..+..++.+.+.+|.+|.+.|+.+.++...+..+.
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 9999999999988876554322 223345667778888888899999999999999999999999999999999998
Q ss_pred HHHHHHhhHHHHHhhccccchhhhhHHHHHHHH-hhheecccCCCCCHHHHHHhcCC
Q 009099 486 NFVIGLYFLSVVNKFGISTVYLGFATVCLLAVL-YIAVNVVETKGRSLEEIERALNP 541 (543)
Q Consensus 486 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 541 (543)
..+....+-.+.+..+....|..+++++.+..+ ..+++.||+|+++.+|+++.+++
T Consensus 444 ~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 444 NFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 887776666666655545666677777766666 68889999999999999887654
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=287.57 Aligned_cols=373 Identities=20% Similarity=0.202 Sum_probs=292.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
+..+..+.++.|..+....+...++|++++|+|+|..+. |++.|+|.+++.++.|+...+.||+.||++++..+.++.
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~a--G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAA--GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 455666788889999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++++++++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|..+|.++.+. .|||+
T Consensus 90 ~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~-~GWR~ 168 (394)
T COG2814 90 VSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL-FGWRA 168 (394)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH-hhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877 99999
Q ss_pred HHHHhHHHHHHHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 263 MFGLAAIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
.|++.++++++..+.. ..+| |+...++ ++. +..+..+++|++..+
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-~~~-------------------------------~~~~~~~~l~~p~v~ 214 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP--PSEISGS-LPG-------------------------------PLRTLLRLLRRPGVL 214 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CccCCCC-CCc-------------------------------chhHHHHHhcCchHH
Confidence 9999999998866554 4457 2100000 000 111124566677766
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASM 419 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 419 (543)
...+...+.+. +.+..+.|.-|.+.+..|++.... ....++++.++|..++|++.|| +.|+.+.....+.++..
T Consensus 215 ~~l~~t~l~~~---g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~ 290 (394)
T COG2814 215 LGLLATFLFMT---GHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALAL 290 (394)
T ss_pred HHHHHHHHHHc---chhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHH
Confidence 66555554444 334455555565555567766544 7778899999999999999999 88888888877777777
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
+.+.+... +.+..+....++++....... .......+.. ++.+..+.+++....|+|..+|..+.|.++|+
T Consensus 291 l~l~~~~~-------~~~~~~~~~~~wg~a~~~~~~-~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 291 LALTFTGA-------SPALALALLFLWGFAFSPALQ-GLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred HHHHHhcc-------hHHHHHHHHHHHHHHhhhhhh-HHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 76655411 222233333333332222111 1222334433 46699999999999999999999999999999
Q ss_pred hccccchhhhhHHHHHHHHhhheecc
Q 009099 500 FGISTVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 500 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
.|+....++.+.+.+++.++.+...+
T Consensus 362 ~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 362 LGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888888888776655444
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.3e-36 Score=306.61 Aligned_cols=395 Identities=16% Similarity=0.190 Sum_probs=267.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchh--hHHH--HHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTV--LQGW--IVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~g~--~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
.+....++.+.+++|...++...|.+.++++.+.++. ..+. +.++.++++.++++++|+++||+|||+++.+++++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 4556678899999999999999999999997554332 1112 25788899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHH--------HHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcc
Q 009099 181 LAAGAFLCATAQSVQT--------MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLP 252 (543)
Q Consensus 181 ~~i~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 252 (543)
++++++++++++|+++ ++++|+++|++.|+.++....++.|++|+++|+++.++...+..+|..+++.+...
T Consensus 97 ~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~ 176 (490)
T PRK10642 97 MSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL 176 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999875 89999999999999999999999999999999999999998888888877755433
Q ss_pred cC----C---CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCC
Q 009099 253 LA----G---NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSA 325 (543)
Q Consensus 253 l~----~---~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (543)
+. + ...|||+.|++.+++.++..++...+||+|++...+++.++..+ +...+
T Consensus 177 ~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~---------------------~~~~~ 235 (490)
T PRK10642 177 ISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR---------------------EGLQD 235 (490)
T ss_pred HHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------------------ccccc
Confidence 21 1 13799999999877666555555667999886432211100000 00001
Q ss_pred CcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhcc
Q 009099 326 EPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQ 402 (543)
Q Consensus 326 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~ 402 (543)
+++.++++++++ .++.........++ ....++.+..|.|.+++ ..+.+.... ......++.+++.++.|+++||+
T Consensus 236 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 313 (490)
T PRK10642 236 GPKVSFKEIATK-HWRSLLTCIGLVIA-TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF 313 (490)
T ss_pred cccCCHHHHHHH-hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 123356666654 22222222222222 22334555667777664 457665433 44455677888999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHH
Q 009099 403 GRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMH 482 (543)
Q Consensus 403 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 482 (543)
|||+.+..+.++..++...+..... ...........++.+.+.+... .....+..|.+|++.|++++|+.+...
T Consensus 314 grr~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~-g~~~~~~~~~~p~~~Rg~~~g~~~~~~ 387 (490)
T PRK10642 314 GRRPFVILGSVALFVLAIPAFILIN-----SNVIGLIFAGLLMLAVILNCFT-GVMASTLPAMFPTHIRYSALAAAFNIS 387 (490)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCccchHHHHHHHHHH
Confidence 9999887776544333222111111 0111222222333333222222 233446778999999999999877778
Q ss_pred HHHHHHHHHhhHHHHHhhc-cccchhhhhHHHHHHHHhhheecccCCC
Q 009099 483 WISNFVIGLYFLSVVNKFG-ISTVYLGFATVCLLAVLYIAVNVVETKG 529 (543)
Q Consensus 483 ~~g~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (543)
.+++.++|.+.+.+.+..+ +..++.+..+.++++.+..+ +.||+++
T Consensus 388 ~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~ 434 (490)
T PRK10642 388 VLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETAN 434 (490)
T ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccC
Confidence 8888899999999988665 44455555555555544433 3466544
No 10
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=6.4e-36 Score=298.05 Aligned_cols=392 Identities=17% Similarity=0.207 Sum_probs=279.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
+..+..+.+..+.++++.....+..|.+.+++|+++.+. +++.+++.+++.+++++.|+++||+|||+++.++.++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEG--AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 444566677888889999999999999999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++.++++++++++.++++|+++|++.+..++....++.|++|+++|++++++...+..+|.++++.+.+.+.+. .+||+
T Consensus 95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~-~~w~~ 173 (426)
T PRK12307 95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA-YGWRA 173 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc-CCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888877755 79999
Q ss_pred HHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHH
Q 009099 263 MFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKV 342 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 342 (543)
.|++..+..++........||++++..++.+.+ .+ ..+...+..+..++++++++.++.
T Consensus 174 ~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------------~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 232 (426)
T PRK12307 174 AFFVGLLPVLLVIYIRARAPESKEWEEAKLSGK------------GK---------HSQSAWSVFSLSMKGLFNRAQFPL 232 (426)
T ss_pred HHHHHHHHHHHHHHHHHHCCCChHHHHhhhhcc------------cc---------ccccchhhhhHHHHHHHhhchHHH
Confidence 998865444333322223455543321110000 00 000000011224567777777665
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHH
Q 009099 343 VSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASML 420 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 420 (543)
........+. .+.....+..+.|.+.++.+.+.... ......++.+++.++.|++.||++||+.+..+.++..+..+
T Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 311 (426)
T PRK12307 233 TLCVFIVLFS-IFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIF 311 (426)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 4443332222 22223334556677777777765533 45566788899999999999999999988877766655544
Q ss_pred HHHHHHhhcccccccchhHHHHHHHHHHHhh-cCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 421 LLSLSFTWKVLAPYSGTLAVLGTVLYVLSFS-LGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
.+.... ......+...+++.++. .+..+....++.|.+|++.||+++|+.+...++++.++|.+.|.+.+.
T Consensus 312 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 312 PLFRIP--------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHHHHc--------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 433220 11112222233333222 223344445778999999999999999999999999999999999999
Q ss_pred hccccc-hhhhhHHHHHHHHhhheecccC
Q 009099 500 FGISTV-YLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 500 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
.|+... +.+.++.+.++..+.....+++
T Consensus 384 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (426)
T PRK12307 384 MGLGAALTFIVAFWTATILLIIGLSIPDR 412 (426)
T ss_pred ccHHHHHHHHHHHHHHHHHhhccccCChh
Confidence 886543 3333333333333333334443
No 11
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.9e-37 Score=309.86 Aligned_cols=397 Identities=12% Similarity=0.029 Sum_probs=275.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhH
Q 009099 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (543)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~ 179 (543)
+..+.++.++++..+..++++..+++..|.+.+|+|++..+. |++.+++.+++.+++++.|+++||+|||+++..+++
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTEL--GMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 345666777788888888899999999999999999999998 999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHH-----hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 180 PLAAGAFLCAT-----AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 180 ~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
+++++.++.++ +++++.+++.|+++|++.+...+....+++||+|+++|++++|++..+.++|.++++++..++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 88887776665 5899999999999999999999999999999999999999999999999999999988876554
Q ss_pred CC--CCchHHHHHHhHHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCc-ccc
Q 009099 255 GN--PLWWRTMFGLAAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEP-EAG 330 (543)
Q Consensus 255 ~~--~~~wr~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 330 (543)
.. ..+||..|.+.+++.++..+..++ .+++|+..... +.++ . ..+....+ +...+.++.. ...
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~-~~~~---~---~~~~~~~~------~~~~~~~~~~~~~~ 249 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG-KAEE---I---FGEPISEE------DKETESTDMTKWQI 249 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC-Chhh---c---ccCccchh------hhccccccCcHHHH
Confidence 32 136999998888887765554443 46665421100 0000 0 00000000 0000000000 011
Q ss_pred h-hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChh
Q 009099 331 W-FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKN 406 (543)
Q Consensus 331 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~ 406 (543)
+ +..++++.++...+...+... .+.....|.|.+++ ..|++.... ......++.+++.++.|+++||+++|+
T Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~ 325 (467)
T PRK09556 250 FVEYVLKNPVIWLLCFANIFLYI----VRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR 325 (467)
T ss_pred HHHHHHcChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 1 225667666655444333322 23445667776664 467776544 455567889999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHH-H
Q 009099 407 LLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWI-S 485 (543)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g 485 (543)
.......+..++...+..... .+.....+..++++.+ ..+..........|.+|++.+|++.|+.+...++ |
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g 398 (467)
T PRK09556 326 ALVACIALALIIFTLGVYQHA------TSEYMYLASLFALGFL-VFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFG 398 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhc------CcHHHHHHHHHHHHHH-HhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHh
Confidence 766554433333222222100 1112222222222222 1122222223566999999999999999999997 7
Q ss_pred HHHHHHhhHHHHH------------hhccccchhhhhHHHHHHHHhhhe
Q 009099 486 NFVIGLYFLSVVN------------KFGISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 486 ~~~~~~~~g~~~~------------~~g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
++++|.+.|.+.| ..||+..|.+..++.+++.++.++
T Consensus 399 ~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 399 DSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999 577888898887777777655443
No 12
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2e-36 Score=298.36 Aligned_cols=391 Identities=15% Similarity=0.115 Sum_probs=270.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 181 (543)
+|.++.++++..+.++++...++...|.+.+|+|++.++. |++.+++.+++.+++++.|+++||+|||+++..+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMF--GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 4556667777888899999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC-----C
Q 009099 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG-----N 256 (543)
Q Consensus 182 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-----~ 256 (543)
+++++++++++|++.+++.|+++|++.+...+....++.|++|+++|+++++++..+..+|.++++++++++.+ .
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999998999999999999999999999999999999999887653 2
Q ss_pred CCchHHHHHHhHHHHHHHHH-HhcccCCChhHHHhcCChHHHHHHHH-HHhCchhhHHHHHHHHHhccC-CCCcccchhh
Q 009099 257 PLWWRTMFGLAAIPSILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQ-TLYGKERVSEVMLDLTNAGQG-SAEPEAGWFD 333 (543)
Q Consensus 257 ~~~wr~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 333 (543)
..|||+.|++.+++.++..+ ..+++||+|+.. +.-.++..+... ........ ..+.+...+. ....+..+++
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 238 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEEDKKALKEMIDNDQLT---LEQPEGAFAHAAMPQRSMLRE 238 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHHHHHHHHHHHhcccc---ccccccccccccccHHHHHHH
Confidence 36899999998888776544 445568887521 000011111111 00000000 0000000000 0000112333
Q ss_pred hhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc--CCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHH-
Q 009099 334 LFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSV--GIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLL- 408 (543)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~- 408 (543)
++ ++.++...+ ..+.....+..+..|.|.++++. +.+.. ........++.+++.++.|+++||+++|+..
T Consensus 239 ~~-~~~~~~~~~----~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~ 313 (412)
T TIGR02332 239 IF-TPAIMLYTL----AYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHT 313 (412)
T ss_pred hc-ChHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHH
Confidence 33 233333222 22223334566777888888774 44433 3356677888999999999999999977653
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHH
Q 009099 409 TFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFV 488 (543)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 488 (543)
.....+..++. ++... . ...........+...+.. ...+.......|.+|++.|++++|+.+...++|+++
T Consensus 314 ~~~~~~~~~~~-~~~~~-~------~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~ 384 (412)
T TIGR02332 314 ALPYLFAAAGW-LLASA-T------DHNLIQLLGIIMASMGSF-SAMAIFWTTPDQSISLQARAIAIAVINATGNIGSAL 384 (412)
T ss_pred HHHHHHHHHHH-HHHHh-c------CCHHHHHHHHHHHHHHhh-hhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhh
Confidence 33333333322 22211 0 011111212222222221 122333345567889999999999999999999999
Q ss_pred HHHhhHHHHHhhc-cccchhhhhHHH
Q 009099 489 IGLYFLSVVNKFG-ISTVYLGFATVC 513 (543)
Q Consensus 489 ~~~~~g~~~~~~g-~~~~~~~~~~~~ 513 (543)
+|.+.|.+.|..| |...+.+.+++.
T Consensus 385 ~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 385 SPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred hhhhcccccccCCCCchhHHHHHHHH
Confidence 9999999999886 777777665543
No 13
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.9e-37 Score=313.38 Aligned_cols=388 Identities=22% Similarity=0.295 Sum_probs=289.7
Q ss_pred hhHHHHHHHcCCC---cchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHH
Q 009099 125 GALEYLAKDLGIA---ENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGR 201 (543)
Q Consensus 125 ~~~~~i~~~~~~s---~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r 201 (543)
+..|.+.+|+|++ ..+. +++.+++.+++.++++++|+++||+|||++++++.++.+++.++++++++++.++++|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~--~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKV--DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHH--HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 4678889999998 6666 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
++.|++.+...+....++.|++|+++|+++.++...+..+|.+++++++..+. +||+.|++.+++.++..+..+++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999887663 39999999999888877777788
Q ss_pred CCChhHHHhcCChHHHHHHHHHHhCchhhH--HHHHHHH-HhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhh
Q 009099 282 PESPRWLFQQGKKSEAEKSIQTLYGKERVS--EVMLDLT-NAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGI 358 (543)
Q Consensus 282 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 358 (543)
||+|+|+..+++.+++.+.+++..+.+... .+..... .++...++++.+++++++++.++...+.....++.....+
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888877777666554332211 1110110 1111111224578889998888776665554444322222
Q ss_pred HHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchh
Q 009099 359 NAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTL 438 (543)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (543)
.... ......+.+. .......++..+++.++.+++.||+|||+.+..+.++.+++++++.+... ...+.
T Consensus 344 ~~~~----~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~------~~~~~ 412 (505)
T TIGR00898 344 YGLV----LDLGNLGGNI-YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV------DLYFL 412 (505)
T ss_pred HHHh----ccccccCCCh-HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC------CchHH
Confidence 2222 2223333332 23445567788899999999999999999998888887777766654311 11122
Q ss_pred HHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHH
Q 009099 439 AVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVL 518 (543)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 518 (543)
.....++...+ .....+..+.+..|.+|++.|++++|+.+....+|++++|.+.+ .+..++..++.+++++.+++.+
T Consensus 413 ~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~--~~~~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 413 RTALAVLGKFG-ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY--LGEKWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH--HHHHHHhhHHHHHHHHHHHHHH
Confidence 22222222222 22334556668899999999999999999999999999999988 4455666777777777777766
Q ss_pred hhheecccCCCCCHH
Q 009099 519 YIAVNVVETKGRSLE 533 (543)
Q Consensus 519 ~~~~~~~~~~~~~~~ 533 (543)
+. ++.||+++++.+
T Consensus 490 ~~-~~lpet~~~~l~ 503 (505)
T TIGR00898 490 LT-LFLPETKGVPLP 503 (505)
T ss_pred HH-HcCcCCCCCCCC
Confidence 54 456888877654
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.2e-36 Score=300.65 Aligned_cols=396 Identities=14% Similarity=0.139 Sum_probs=276.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
+.+...+++..+...++...++..+|.+.+++|++..+. |++.+++.+++.+++++.|+++||+|||+++.++.++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDI--GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 344555667777777777788889999999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++.++++++++++.+++.|++.|++.|..++....++.|++++++|++++++.+.+.++|..+++.+++++.+. .+||+
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gw~~ 178 (434)
T PRK11663 100 IINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH-YGWRY 178 (434)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888765 79999
Q ss_pred HHHHhHHHHHHHH-HHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhh-----hhc
Q 009099 263 MFGLAAIPSILLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFD-----LFS 336 (543)
Q Consensus 263 ~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~ 336 (543)
.|++.+++.++.. +..++++|+|++.......+...+. .+ .. ++.++++.++++ .++
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~-------------~~---~~~~~~~~~~~~~~~~~~~~ 241 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA-LE-------------LA---QQQEGAGLSRKEILTKYVLL 241 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc-cc-------------cc---hhccccCCChhhhHHHHHhc
Confidence 9999888776544 3444567776532111000000000 00 00 000001111222 444
Q ss_pred cchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhcc--CChhHHH-H
Q 009099 337 SRYWKVVSVGAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQ--GRKNLLT-F 410 (543)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~-~ 410 (543)
++..+...+....... .+..+..|.|.++ ++.|++.... ......++.++++++.|++.||+ ++|+... .
T Consensus 242 ~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~ 317 (434)
T PRK11663 242 NPYIWLLSFSYVLVYV----VRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLI 317 (434)
T ss_pred ChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHH
Confidence 5555544433332222 2445556666666 4457765543 55667788999999999999998 3333322 2
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhh-cCcccccccccccccChhhhhHHHHHHHHHHHHHHHHH
Q 009099 411 SFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFS-LGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVI 489 (543)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 489 (543)
......+....+... . . ....... ..+++.++. .+..........|.+|++.+++++|+.++..++|++++
T Consensus 318 ~~~~~~~~~~~~~~~-~-----~-~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 389 (434)
T PRK11663 318 FAAGILLSVGSLWLM-P-----F-ASYVMQA-ACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALS 389 (434)
T ss_pred HHHHHHHHHHHHHHc-c-----c-ccHHHHH-HHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHh
Confidence 111111121111111 0 0 1111111 122222221 11222233466899999999999999999999999999
Q ss_pred HHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccCCCC
Q 009099 490 GLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGR 530 (543)
Q Consensus 490 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (543)
|.+.|.+.|+.|+...|.+.+++++++++..+...++++++
T Consensus 390 p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 390 GYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred cccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 99999999999999999998888888777665555544443
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.2e-35 Score=294.05 Aligned_cols=376 Identities=21% Similarity=0.278 Sum_probs=277.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhH
Q 009099 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (543)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~ 179 (543)
++.|.++.++++..+.++++....+...|.+.+++|.++++. +++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQM--GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 466778888888999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc
Q 009099 180 PLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW 259 (543)
Q Consensus 180 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 259 (543)
+.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+. .+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~ 167 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD-AA 167 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-cC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777655 78
Q ss_pred hHHHHHHhHHHHHHHHH-HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccc
Q 009099 260 WRTMFGLAAIPSILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSR 338 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (543)
||+.|++.+++.++..+ ...++||+|++..++++.++..+. .+.+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~ 217 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPV------------------------------LRALFGEG 217 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhh------------------------------HHHHhhhh
Confidence 99999988876655444 444568877643222111110000 01111111
Q ss_pred ---hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHH
Q 009099 339 ---YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFT 413 (543)
Q Consensus 339 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 413 (543)
..+...+.. +...........+.|.+.++.+.+... .......++.+++.++.|++.||+++|+.+..+..
T Consensus 218 ~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (406)
T PRK11551 218 RATATLLLWISY----FFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYA 293 (406)
T ss_pred hhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 111111111 111222344556677777777776553 35566778899999999999999999998877665
Q ss_pred HHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhh
Q 009099 414 GMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYF 493 (543)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 493 (543)
...++++.+... .+.+...+..++.+.+. .+..+....+..|.+|++.|+++.|+.+...++|..++|.+.
T Consensus 294 ~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~ 364 (406)
T PRK11551 294 GILASLAALAAA--------PSFAGMLLAGFAAGLFV-VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA 364 (406)
T ss_pred HHHHHHHHHHhc--------CcHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhH
Confidence 555554444321 01122222222333222 233455566888999999999999999999999999999999
Q ss_pred HHHHHhhc-cccchhhhhHHHHHHHHhhh
Q 009099 494 LSVVNKFG-ISTVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 494 g~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 521 (543)
|.+.++.+ +...+.....+.+++.++.+
T Consensus 365 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 365 GQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred hhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99998765 33444445445544444443
No 16
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.2e-35 Score=291.93 Aligned_cols=371 Identities=18% Similarity=0.147 Sum_probs=268.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
|..+..+.+..+..........+.+|.+.+++|.+.++. |++.+.+.+++.++++++|+++||+|||+++..+.++++
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQV--GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 333444444445544444455677899999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++++++++++|+++++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++|.+++.+.+. .+||+
T Consensus 86 ~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~-~gw~~ 164 (390)
T PRK03545 86 ASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY-LGWRT 164 (390)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-hcHHH
Confidence 99999999999999999999999999988899999999999999999999999999999999999999888755 79999
Q ss_pred HHHHhHHHHHHHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 263 MFGLAAIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
.|++.+++.++..+.. .++||.++ + +++. ..+.+++++++.++
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~~----~-~~~~-------------------------------~~~~~~~~~~~~~~ 208 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLPS----E-HSGS-------------------------------LKSLPLLFRRPALV 208 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC----C-Ccch-------------------------------HHHHHHHHhCcHHH
Confidence 9999988877655443 33455432 0 0000 01123456666655
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASM 419 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 419 (543)
.......+..... +....+..+++.+..+.+.... ......++.++++++.+++.||+++|... .+..+..++.
T Consensus 209 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 209 SLYLLTVVVVTAH---FTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHH
Confidence 4443333222221 1222222333333356655433 55667788999999999999999987643 4444333333
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
..+.... .+.+...+...+.+.+.. ...+.....+.+..| +.+++++|+.+...++|..+||.+.|.+.|+
T Consensus 285 ~~l~~~~-------~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~ 355 (390)
T PRK03545 285 LLLLPAA-------NSEWHLSVLSIFWGIAIM-CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH 355 (390)
T ss_pred HHHHHHh-------chHHHHHHHHHHHHHHHh-cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3322210 112223333344444332 233334446667766 5789999999999999999999999999999
Q ss_pred hccccchhhhhHHHHHHHHhhheecc
Q 009099 500 FGISTVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 500 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
.|++..|.+.+++.+++.++.+...+
T Consensus 356 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 356 LGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999988888887776655443
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.5e-35 Score=289.03 Aligned_cols=375 Identities=14% Similarity=0.107 Sum_probs=271.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
|.....++++.+.... ....++.+|.+++|+|+|.++. |++.+++.+++.+++++.|+++||+|||+++..++++++
T Consensus 9 ~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 9 FMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVA--ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 4444444444444333 3566889999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++.+++++++|++.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++++.+...+||+
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 999999999999999999999999999999999999999997 7799999999999999999999998887765458999
Q ss_pred HHHHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 263 MFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
.+.+.++..++..+..++. ++.|+ +++ +++.+.++.++++..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--------------------------------~~~~~~~~~l~~~~~~ 208 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVA----SSH--------------------------------KTTTTPVRVVFTPRAW 208 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc----ccc--------------------------------CCCcCCcccccCHhHH
Confidence 9877666554433332222 11111 000 0001112344455444
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASM 419 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 419 (543)
...+...+.. ..+.....+.|.++++.+.+.... ......++.++++++.+++.||+++|+....+..+.+++.
T Consensus 209 ~l~~~~~~~~----~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 209 TLGVYFGLIN----GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Confidence 4333322222 234555666777777777766533 6667788999999999999999999998888877766666
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCccccccccccccc-ChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIF-ASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
+++.... . .... ...++.+.+.+. ..+.......+.. |++.+++++|+.+...++++.++|.+.|++.|
T Consensus 285 ~~~~~~~------~-~~~~--~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~ 354 (393)
T PRK09705 285 CGFIWLP------L-QLPV--LWAMVCGLGLGG-AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRS 354 (393)
T ss_pred HHHHHcc------c-hHHH--HHHHHHHHhccc-hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443210 0 1111 112233333332 2233333444555 56789999999999999999999999999999
Q ss_pred hhc-cccchhhhhHHHHHHHHhhheecccCCCCC
Q 009099 499 KFG-ISTVYLGFATVCLLAVLYIAVNVVETKGRS 531 (543)
Q Consensus 499 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (543)
..| +...|.+.++++++..++.+.+.+|++.+.
T Consensus 355 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 355 ISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 987 666677777777777666666777776554
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=8e-35 Score=288.70 Aligned_cols=388 Identities=18% Similarity=0.206 Sum_probs=270.6
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhh
Q 009099 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDA 178 (543)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~ 178 (543)
.++.|..+..++++.+.++++....++..|.+++++|++..+. +++.+++.++..+++++.|+++||+|||++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDA--ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3455677778889999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCC-
Q 009099 179 VPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP- 257 (543)
Q Consensus 179 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~- 257 (543)
++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 85 VLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988876541
Q ss_pred CchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhcc
Q 009099 258 LWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSS 337 (543)
Q Consensus 258 ~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (543)
.+||+.|++.++..++..+....+||++++..++++.+...+..++..+...... . ..++.....++. .
T Consensus 165 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~--~ 233 (405)
T TIGR00891 165 DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIA------N---IVMTLAAAMVQS--A 233 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhh------h---hhhhhhHHhhhh--h
Confidence 2499999887776666655566678876543222211111111111110000000 0 000000001111 1
Q ss_pred chhHH-HHHHHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHH
Q 009099 338 RYWKV-VSVGAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFT 413 (543)
Q Consensus 338 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 413 (543)
+..+. .........+.... ......+.+.+. ++.+.+.... ......++.+++.++.+++.||++||+.+..+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~ 312 (405)
T TIGR00891 234 GKRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLL 312 (405)
T ss_pred hhhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHH
Confidence 11111 11111111111111 222333444444 4467766543 5566778899999999999999999998877765
Q ss_pred HHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhh
Q 009099 414 GMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYF 493 (543)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 493 (543)
+..+....+... . .+.+...+..++.+ ....+..+....++.|.+|++.|++++|+.+.+.++|+.++|.+.
T Consensus 313 ~~~~~~~~~~~~-~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~ 384 (405)
T TIGR00891 313 AGQLLIIPVFAI-G------ANVAVLGLGLFFQQ-MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIG 384 (405)
T ss_pred HHHHHHHHHHHh-C------CchHHHHHHHHHHH-HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHH
Confidence 543332222111 0 11122222222222 222334445556788999999999999999999999999999999
Q ss_pred HHHHHhhc-cccchhh
Q 009099 494 LSVVNKFG-ISTVYLG 508 (543)
Q Consensus 494 g~~~~~~g-~~~~~~~ 508 (543)
|.+.|+.| |+..+..
T Consensus 385 g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 385 ALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHhccccchhHHh
Confidence 99999998 6655443
No 19
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=8.2e-35 Score=289.36 Aligned_cols=377 Identities=16% Similarity=0.186 Sum_probs=250.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcC---CCcchhhHHHHHHHH---HHHHHHHHHhhHhhhhhhcccchhh
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLG---IAENTVLQGWIVSSL---LAGATVGSFTGGSLADKFGRTRTFQ 175 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~~~g~~~s~~---~l~~~i~~~~~g~l~dr~Grr~~~~ 175 (543)
++..+...+++.+.++++...++...|.+.++++ .+..+. +...+++ +++..++++++|+++||+|||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQL--LQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 3445556678889999999999999999999985 344433 4444444 4555599999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhHH--------HHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHH
Q 009099 176 LDAVPLAAGAFLCATAQSVQ--------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (543)
Q Consensus 176 ~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 247 (543)
.++++++++++++++++++. .++++|+++|++.|..++...+++.|++|+++|+++.++...+...|.++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998874 5899999999999999999999999999999999999999888888888877
Q ss_pred HhhcccCC-------CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHh
Q 009099 248 VAGLPLAG-------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNA 320 (543)
Q Consensus 248 ~~~~~l~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (543)
++...+.. ...|||+.|++.+++.++.......+||++++..++ .
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~------~---------------------- 229 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA------L---------------------- 229 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh------h----------------------
Confidence 66544321 137999999998887776655555567765421000 0
Q ss_pred ccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHH
Q 009099 321 GQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASS 397 (543)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 397 (543)
+++.+++++++++..+...+...+ .....++.+..|.|.+++ ..+.+.... ......+...++.++.|+
T Consensus 230 -----~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~ 301 (432)
T PRK10406 230 -----KEAGSLKGLWRNRRAFIMVLGFTA---AGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGA 301 (432)
T ss_pred -----cccccHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011245667766555443332221 111223445556666654 467765433 444555667788888999
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHH
Q 009099 398 LMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVAL 477 (543)
Q Consensus 398 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 477 (543)
++||++||+.+.....+.++....+..... . .......+.......+......+....+.+|.+|++.|++++|+
T Consensus 302 l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~ 376 (432)
T PRK10406 302 LSDKIGRRTSMLCFGSLAALFTVPILSALQ-N----VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGL 376 (432)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHH-c----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhH
Confidence 999999998876665543333222211110 0 01111111111111111111223445578899999999999999
Q ss_pred HHHHHHH-HHHHHHHhhHHHHHhhc-cccchhhhhHHHHHHHHhhhe
Q 009099 478 SLGMHWI-SNFVIGLYFLSVVNKFG-ISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 478 ~~~~~~~-g~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 522 (543)
.+.++++ .+...|.+.+ +.+..| +...+++.+++.+++.+..++
T Consensus 377 ~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 377 SYAVANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9988775 3445777777 446666 444455555555555554443
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.7e-35 Score=283.85 Aligned_cols=355 Identities=14% Similarity=0.048 Sum_probs=246.6
Q ss_pred HHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHH
Q 009099 116 FGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQ 195 (543)
Q Consensus 116 ~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 195 (543)
+......+++.+|.+++|+|++..+. |++.+.+.+++.+++++.|+++||+|||+++..++.....+.+....++|++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEEL--GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHH
Confidence 34455677889999999999999998 9999999999999999999999999999887655555444433333448999
Q ss_pred HHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHH
Q 009099 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (543)
Q Consensus 196 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 275 (543)
.++++|+++|++.+. .......++|++|+++|++++++...+..+|.+++++++.++.+. .|||+.|++.++++++..
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-GGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH
Confidence 999999999999985 556666779999999999999999999999999999999998865 899999999888876654
Q ss_pred H-HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHH
Q 009099 276 L-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQ 354 (543)
Q Consensus 276 ~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 354 (543)
+ ..+++||+|++.. +..+..+ ...+++++++++..+...+..++....
T Consensus 159 ~~~~~~lp~~p~~~~---~~~~~~~---------------------------~~~~~~~ll~~~~~~~~~~~~~~~~~~- 207 (368)
T TIGR00903 159 ILVLAALPALPFQAA---EGFGFKD---------------------------AVKEFGALAGRKDLWIIGAILGFGVAL- 207 (368)
T ss_pred HHHHHHcCCCCCCCC---CCcchHH---------------------------HHHHHHHHHcChhHHHHHHHHHHHHHH-
Confidence 4 4455688876321 1000000 001245778887776665554444433
Q ss_pred hhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCCh---hHHHH-HHHHHHHHHHHHHHHHhhcc
Q 009099 355 LAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRK---NLLTF-SFTGMAASMLLLSLSFTWKV 430 (543)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---~~~~~-~~~~~~~~~~~~~~~~~~~~ 430 (543)
+..+..|.|.++++.+++... .....+..+.+.+..++++||..|| +.... ...+.++.+..+...
T Consensus 208 ---~~~~~~wlp~~L~~~g~s~~~--~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~----- 277 (368)
T TIGR00903 208 ---FDNLAIWLEAALRPAGLEDIA--GDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE----- 277 (368)
T ss_pred ---HHHHHHHHHHHHHHCCCChHH--HHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 455667888888777766432 1222233334444557888887543 32222 232333322222211
Q ss_pred cccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhh
Q 009099 431 LAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFA 510 (543)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~ 510 (543)
.+....+... .....+.....+..+.+.+|.+|++.|+++.|+.+..++++++++|.+.+.+.. |....|.+++
T Consensus 278 ---~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~ 351 (368)
T TIGR00903 278 ---LNRLALFAFI-GIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLA 351 (368)
T ss_pred ---cccHHHHHHH-HHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHH
Confidence 0112222222 222222323334566688999999999999999999999999999999988773 6667788888
Q ss_pred HHHHHHHHhhh
Q 009099 511 TVCLLAVLYIA 521 (543)
Q Consensus 511 ~~~~~~~~~~~ 521 (543)
+..+++.+..+
T Consensus 352 ~~~~i~~~~~~ 362 (368)
T TIGR00903 352 ILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHH
Confidence 88777776654
No 21
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.5e-41 Score=341.07 Aligned_cols=430 Identities=36% Similarity=0.611 Sum_probs=336.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHH--HHcCCCcch-------hhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLA--KDLGIAENT-------VLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~--~~~~~s~~~-------~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
.++.+.++++....+...+... .++..+... .+.+++.+...+|..+|++++|.++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4455888888888777666555 223322221 2348999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh---hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC-
Q 009099 181 LAAGAFLCATAQ---SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN- 256 (543)
Q Consensus 181 ~~i~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~- 256 (543)
..+++++.++++ +++.++++|+++|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++..+...
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999888887655332
Q ss_pred -CCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhh
Q 009099 257 -PLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLF 335 (543)
Q Consensus 257 -~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (543)
..+||+.+++.++++++..+..+++||+|+|+..+++.+++.+.+++.++.+..+++.++..++.++.++++.++++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 1459999999999998888888889999999999999888888888765554433333333333333333336788888
Q ss_pred ccch-hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHH
Q 009099 336 SSRY-WKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTG 414 (543)
Q Consensus 336 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 414 (543)
+++. .++..+...+..+....++....+|.+.+.+..+.+..........+..+++.+++.++.||+|||+.++.+..+
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~ 325 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLL 325 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8755 445555555555555666677788888888887777774445556677778888888999999999999998888
Q ss_pred HHHHHHHHH-HHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhh
Q 009099 415 MAASMLLLS-LSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYF 493 (543)
Q Consensus 415 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 493 (543)
.+++.+.+. ................+....++...+..+..+..+.+..|.+|++.|+++.|+...++++++++++.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~ 405 (451)
T PF00083_consen 326 MAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLF 405 (451)
T ss_pred ccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 877777665 1111111000112333444444555666677888888999999999999999999999999999999999
Q ss_pred HHHHHhhccccchhhhhHHHHHHHHhhheecccCCCCCHHHHHHhc
Q 009099 494 LSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGRSLEEIERAL 539 (543)
Q Consensus 494 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (543)
..+.+..+....+.+.++++++..++.+++.||+|+++.+|+++++
T Consensus 406 ~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 406 PYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 8888887766778888888888888889999999999999999874
No 22
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.5e-34 Score=287.38 Aligned_cols=404 Identities=16% Similarity=0.151 Sum_probs=264.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 181 (543)
+|.++...++.......++..++...|++.++ |++..+. +++.+++.+++.++++++|+++||+|||++++.+.+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~--g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDL--GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHH--HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 34444555556666666666667788999988 9999988 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh----hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHH-HHHHHhhcccCCC
Q 009099 182 AAGAFLCATAQ----SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGI-LAALVAGLPLAGN 256 (543)
Q Consensus 182 ~i~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~~~~~l~~~ 256 (543)
+++.+++++++ +++.+++.|++.|++.+..++.....+.+++|+++|++++++++.+.++|. +.+++++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99999888763 788899999999999998888888889999999999999999999999886 4566654333222
Q ss_pred CCchHHHHHHhHHHHHHHH-HHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccc-hhhh
Q 009099 257 PLWWRTMFGLAAIPSILLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAG-WFDL 334 (543)
Q Consensus 257 ~~~wr~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 334 (543)
.+||+.|++.+++.++.. +..+++||+|+....++ .++..+ +. .+ ..+.+++++.+.+.. .+.+
T Consensus 184 -~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~---~~---~~------~~~~~~~~~~~~~~~~~~~~ 249 (452)
T PRK11273 184 -NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP-IEEYKN---DY---PD------DYNEKHEQELTAKQIFMQYV 249 (452)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-hhhhhh---cc---cc------ccccccCCCccHHHHHHHHH
Confidence 589999999888776644 44555688765311111 000000 00 00 000000000000111 1225
Q ss_pred hccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhhhcc--CChhHHH
Q 009099 335 FSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLMDRQ--GRKNLLT 409 (543)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~ 409 (543)
++++.++...+...+.... ......|.|.++++ .+++.... ......++.+++.++.|+++||+ +||+...
T Consensus 250 ~~~~~~~~~~l~~~~~~~~----~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~ 325 (452)
T PRK11273 250 LPNKLLWYIAIANVFVYLL----RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATG 325 (452)
T ss_pred HcChHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHH
Confidence 5666666555444443332 34455667777665 56654433 45566788889999999999998 4444322
Q ss_pred -HHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHH
Q 009099 410 -FSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFV 488 (543)
Q Consensus 410 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 488 (543)
....+..++.+++... . ..+.....+...+++... .+.......+..|.+|++.+|+++|+.+...++|+.+
T Consensus 326 ~~~~~l~~~~~~~~~~~--~----~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 398 (452)
T PRK11273 326 VFFMTLVTIATIVYWLN--P----AGNPTVDMACMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSV 398 (452)
T ss_pred HHHHHHHHHHHHHHHHh--c----ccChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHH
Confidence 2222222222222111 0 001111222222222211 1122222335679999999999999999999998765
Q ss_pred -HHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccCCCCCHHH
Q 009099 489 -IGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGRSLEE 534 (543)
Q Consensus 489 -~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (543)
+|.+.|.+.|+.||+..|.+.+++++++++......+ .++|+.||
T Consensus 399 ~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 444 (452)
T PRK11273 399 AASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI-GEKRHHEE 444 (452)
T ss_pred hhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhc-cccchHHH
Confidence 7999999999999999998888887777665554333 33333343
No 23
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.7e-33 Score=250.44 Aligned_cols=416 Identities=19% Similarity=0.244 Sum_probs=316.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhH
Q 009099 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (543)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~ 179 (543)
+..|...+....+...+.+.....+.+.|.+.+..|.+..+. .++......|..+++..||.++|++|||+.+.+..+
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~--~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQA--PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhh--hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 344555666667777777766677778899999999887777 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc
Q 009099 180 PLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW 259 (543)
Q Consensus 180 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 259 (543)
..++..++.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....+......+ .|
T Consensus 152 ~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~-~g 228 (528)
T KOG0253|consen 152 VTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-FG 228 (528)
T ss_pred HHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-hh
Confidence 9999999999999999999999999999998 888889999999999898777666 88999999999888777766 79
Q ss_pred hHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhH---------------HHHHHHHHh-ccC
Q 009099 260 WRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVS---------------EVMLDLTNA-GQG 323 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-~~~ 323 (543)
|||.......+..+.++..+++||+|++...++++.++.+.++++.+.|+.+ ++..++.+. .+.
T Consensus 229 wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a 308 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSA 308 (528)
T ss_pred HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcc
Confidence 9999999998888888889999999999999999999888888776554321 111111111 112
Q ss_pred CCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcC--------------------C-CchhH-HH
Q 009099 324 SAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVG--------------------I-ESDVA-AS 381 (543)
Q Consensus 324 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~-~~~~~-~~ 381 (543)
.++...+..+++..+..+..++....++...+. |+........+++... . +.... -.
T Consensus 309 ~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdl 387 (528)
T KOG0253|consen 309 AKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDL 387 (528)
T ss_pred ccccccchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHH
Confidence 234455667777766655555554444444333 3444444444433211 0 01111 34
Q ss_pred HHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccc
Q 009099 382 ALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALL 461 (543)
Q Consensus 382 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (543)
....+..+.|.++.+++.||+|||+.+...+++..++.+++..+.. .....+..+..-.+ ..+...+.+.|
T Consensus 388 litslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~--------rn~~tvllf~araf-isg~fqvaYvY 458 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT--------RNAYTVLLFTARAF-ISGAFQVAYVY 458 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC--------cchhHHHHHHHHHH-HhchheEEEEe
Confidence 5566888999999999999999999999999999888888776522 22223333333333 33445577789
Q ss_pred cccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccCCCCCH
Q 009099 462 LPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGRSL 532 (543)
Q Consensus 462 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (543)
..|.+|+..|+++.|....+..+|+++.|.+. +........+..+++++++++.+...++..|+|+|+.
T Consensus 459 tPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 459 TPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred cCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99999999999999999999999999999888 3333344567778888888888888788889988763
No 24
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.6e-34 Score=283.61 Aligned_cols=363 Identities=17% Similarity=0.148 Sum_probs=263.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 189 (543)
.+..+..+. ....++..|.+.+++|++..+. |++.+++.+++.++++++|+++||+|||+++..+.++.+++.++++
T Consensus 10 ~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~ 86 (377)
T TIGR00890 10 VIMCFTSGY-VYTWTLLAPPLGRYFGVGVTAV--AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYA 86 (377)
T ss_pred HHHHHHhhH-HhhhhhHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHH
Confidence 333334333 4456789999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHH
Q 009099 190 TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAI 269 (543)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~ 269 (543)
+++|++.++++|++.|++.+..++.....+.+++| ++|++++++...+.++|..+++.+.+.+.+. .+||+.|++.++
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~f~~~~~ 164 (377)
T TIGR00890 87 IADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL-EGVPAAFIYMGI 164 (377)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc-ccHHHHHHHHHH
Confidence 99999999999999999999888888888999997 5699999999999999987655554454444 789999999998
Q ss_pred HHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHH
Q 009099 270 PSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAA 348 (543)
Q Consensus 270 ~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 348 (543)
+.++..+..++ ++++++.. .+++.+ .++++.+.++.++++..+...+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~-~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (377)
T TIGR00890 165 IFLLVIVLGAFLIGYPPGQL-IKTNIE----------------------------VSVKDYTVWEMLRTPQFWVLYLSFF 215 (377)
T ss_pred HHHHHHHHHHHheecCchhc-cccCcc----------------------------cchhhhhHHHHHcCccHHHHHHHHH
Confidence 88776555443 34433210 000000 0001122345666666655444333
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHcCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHH
Q 009099 349 LFLFQQLAGINAVVYYSTSVFRSVGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSF 426 (543)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 426 (543)
..... ......+.+.+.++.+.+... .......++.++++++.|++.||++||+.+..+..+.+++.+++.+..
T Consensus 216 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T TIGR00890 216 LNAVS----GLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP 291 (377)
T ss_pred HHhHH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 32222 222233344445666766543 355667788899999999999999999998888877777766554421
Q ss_pred hhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccch
Q 009099 427 TWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVY 506 (543)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~ 506 (543)
. ...........+.+.+.+. ..+....++.|.+|+++|+++.|+.+...++|..++|.+.|.+.+..||+..|
T Consensus 292 ~------~~~~~~~~~~~~~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 364 (377)
T TIGR00890 292 M------LNDVLFLATVALVFFTWGG-TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTF 364 (377)
T ss_pred c------chhHHHHHHHHHHHHHhcc-chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHH
Confidence 0 0111122222333333322 23344557889999999999999999999999999999999999999999988
Q ss_pred hhhhHHHHHHH
Q 009099 507 LGFATVCLLAV 517 (543)
Q Consensus 507 ~~~~~~~~~~~ 517 (543)
.+.+++.+++.
T Consensus 365 ~~~~~~~~~~~ 375 (377)
T TIGR00890 365 IVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHhc
Confidence 88777766654
No 25
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=2.6e-33 Score=278.71 Aligned_cols=359 Identities=15% Similarity=0.157 Sum_probs=239.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHH-HHH-----HHHHHHHHHhhHhhhhhhcccchhhhh
Q 009099 104 PFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIV-SSL-----LAGATVGSFTGGSLADKFGRTRTFQLD 177 (543)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~-s~~-----~l~~~i~~~~~g~l~dr~Grr~~~~~~ 177 (543)
.....++++.+.+.+|...++...|.+.+|++.++.+. +.+. +.. .++..+++++.|+++||+|||++++.+
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEF--ASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch--HHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 35677788999999999999999999999999987775 4433 222 223347889999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhHHH--------HHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHh
Q 009099 178 AVPLAAGAFLCATAQSVQT--------MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVA 249 (543)
Q Consensus 178 ~~~~~i~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~ 249 (543)
.+++++++++++++++++. ++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 68999999999999999899999999999999999999998888887777777
Q ss_pred hcccCC-------CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhcc
Q 009099 250 GLPLAG-------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQ 322 (543)
Q Consensus 250 ~~~l~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (543)
++.+.. ...|||+.|++..+...+........||++++..++++
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~----------------------------- 223 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR----------------------------- 223 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc-----------------------------
Confidence 665421 23799999987654432222222223333221100000
Q ss_pred CCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhh
Q 009099 323 GSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLM 399 (543)
Q Consensus 323 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~ 399 (543)
.+.+..+++..+++..+ ..... ..+.....+..+..|.|.++++ .+.+.... ......++.+++.++.|+++
T Consensus 224 --~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 298 (434)
T PRK15075 224 --PSMREIFRSLAANWRIV--LAGML-MVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALS 298 (434)
T ss_pred --cccccHHHHHHHhHHHH--HHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011112222222211 11112 2222233455677778887765 67765543 45566788889999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHH
Q 009099 400 DRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSL 479 (543)
Q Consensus 400 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 479 (543)
||++||+.+..+..+..+.......... . ............+.+.+++ ...+....+..|.+|++.|+++.|+.+
T Consensus 299 Dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~ 373 (434)
T PRK15075 299 DRIGRRPVLIAFTVLAILTAYPALSWLV-A---APSFARMLAVELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAY 373 (434)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHH-c---CCchHHHHHHHHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHH
Confidence 9999999877655443322211111100 0 0111111121222222222 223334457889999999999999976
Q ss_pred HHHHH-HHHHHHHhhHHHHHhhccc
Q 009099 480 GMHWI-SNFVIGLYFLSVVNKFGIS 503 (543)
Q Consensus 480 ~~~~~-g~~~~~~~~g~~~~~~g~~ 503 (543)
.+... ++.++|.+.|.+.|..|+.
T Consensus 374 ~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 374 SLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 65554 5888999999999998854
No 26
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.8e-33 Score=277.81 Aligned_cols=367 Identities=19% Similarity=0.174 Sum_probs=264.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH
Q 009099 108 VACLGAILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 186 (543)
.+++..+...++..+..+.+|. +.+++|.+..+. |++.+++.+++.+++++.|+++||+|||++++.+.++++++.+
T Consensus 19 ~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (399)
T PRK05122 19 SIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLA--GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGL 96 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH--HHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHH
Confidence 3466667777778888888886 678999999988 9999999999999999999999999999999999999988877
Q ss_pred HHHHh--------hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009099 187 LCATA--------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (543)
Q Consensus 187 ~~~~~--------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 258 (543)
++.++ .+++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|.++++.+++.+.+. .
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~ 175 (399)
T PRK05122 97 LYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW-G 175 (399)
T ss_pred HHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc-c
Confidence 66553 25778999999999999999999999999999999999999999999999999999999888765 7
Q ss_pred chHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccc
Q 009099 259 WWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSR 338 (543)
Q Consensus 259 ~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (543)
+||+.+++.++..++..+.....|++++ .++++ .++++.+++
T Consensus 176 g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------------------------~~~~~~~~~- 217 (399)
T PRK05122 176 GLAGLGLLIMLLALLGLLLARPRPAVPP---VKGER----------------------------------LPFRRVLGR- 217 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCccc----------------------------------hhHHHHHHH-
Confidence 9999988777665544433332333221 00000 001111111
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
.+.......+..+ .+.....+.+.++.+.+.+..........++.+++.++.+++.||+++|+.+..+..+.+++
T Consensus 218 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 292 (399)
T PRK05122 218 -VWPYGMGLALASI----GFGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILG 292 (399)
T ss_pred -HHHHHHHHHHHHH----HHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 1111111111111 12333445555555566554445556677888899999999999999999888877777776
Q ss_pred HHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 419 MLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
.+++... .+.+..++..++.+.+.+. ..+.......|..|++.||++.|+++...++|..+++.+.|.+.+
T Consensus 293 ~~~~~~~--------~~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 363 (399)
T PRK05122 293 LLLLWLA--------PSPWMALIGAALTGFGFSL-VFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS 363 (399)
T ss_pred HHHHHHh--------ccHHHHHHHHHHHHHhHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655442 1223333334444444432 233333456688899999999999999999999999999999999
Q ss_pred hhccccchhhhhHHHHHHHHhhheecccCCCC
Q 009099 499 KFGISTVYLGFATVCLLAVLYIAVNVVETKGR 530 (543)
Q Consensus 499 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (543)
..|++..+.+.+++.+++.++.+.+ ++++++
T Consensus 364 ~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 394 (399)
T PRK05122 364 WFGYPSIFLAAALAALLGLALTWLL-YRRAPR 394 (399)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHh-cccccc
Confidence 9999999988888877776655543 333333
No 27
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3.8e-33 Score=277.33 Aligned_cols=379 Identities=15% Similarity=0.136 Sum_probs=254.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHc--CCCcchhhHHHHH-----HHHHHHHHHHHHhhHhhhhhhcccchhh
Q 009099 104 PFVGVACLGAILFGYHLGVVNGALEY-LAKDL--GIAENTVLQGWIV-----SSLLAGATVGSFTGGSLADKFGRTRTFQ 175 (543)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~s~~~~~~g~~~-----s~~~l~~~i~~~~~g~l~dr~Grr~~~~ 175 (543)
..+...+++.+.++++...++...|. +.+++ +.++. . +++. ++.+++..+++++.|+++||+|||++++
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-M--GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-H--HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 35666677889999999998888774 55666 66655 3 5553 3455677899999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhHH--------HHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHH
Q 009099 176 LDAVPLAAGAFLCATAQSVQ--------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (543)
Q Consensus 176 ~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 247 (543)
.+++++++++++++++++++ .++++|+++|++.|..++....++.|++|+++|++..+....+..+|.+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987 5889999999999999999999999999999999999999999999998887
Q ss_pred HhhcccCC-------CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHh
Q 009099 248 VAGLPLAG-------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNA 320 (543)
Q Consensus 248 ~~~~~l~~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (543)
.+...+.. ...+||+.|++.+++.++........||+|++...+++.++.
T Consensus 179 ~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~----------------------- 235 (438)
T PRK09952 179 GLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA----------------------- 235 (438)
T ss_pred HHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc-----------------------
Confidence 66554431 137999999988877655544444567877643222110000
Q ss_pred ccCCCCcccch-hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHH
Q 009099 321 GQGSAEPEAGW-FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVAS 396 (543)
Q Consensus 321 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g 396 (543)
+++.++ +.+++++..+...+.. ...... .++....|.+.+. +..+.+.... .....++..+++.++.|
T Consensus 236 -----~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g 307 (438)
T PRK09952 236 -----KKRIPVIEALLRHPGAFLKIIAL--RLCELL-TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFA 307 (438)
T ss_pred -----cccCCHHHHHHHchHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111 2244444433332211 111111 2333344455444 4466665532 33345667788889999
Q ss_pred HhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHH
Q 009099 397 SLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVA 476 (543)
Q Consensus 397 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 476 (543)
+++||++||+.+..+.++..++.+.+...... .......+...++.+.+.+ ...+..+.++.|.+|++.|+++.|
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~e~~p~~~r~tg~g 382 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSAFPFFMALEA----QSIFWIVFFSIMLANIAHD-MVVCVQQPMFTEMFGASYRYSGAG 382 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc----CChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCcchhHHHHh
Confidence 99999999998887766554443333221110 0011111222222222322 223445568899999999999999
Q ss_pred HHHHHHH-HHHHHHHHhhHHHHHhh--ccccchhhhhHHHHHHHHhhh
Q 009099 477 LSLGMHW-ISNFVIGLYFLSVVNKF--GISTVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 477 ~~~~~~~-~g~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~ 521 (543)
+.+.... +++.++|.+.+.+.+.. +|...+.+.+++.+++.+..+
T Consensus 383 ~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 383 VGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 9776654 89999999999998855 366666666666666655544
No 28
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.9e-33 Score=285.84 Aligned_cols=400 Identities=15% Similarity=0.210 Sum_probs=271.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
..|..+..+++..+.+.++....++.+|.+.+++|++..+. +++.+.+.+++.+++++.|+++||+|||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQA--ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34556667788888999999999999999999999999888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCch
Q 009099 181 LAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (543)
Q Consensus 181 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 260 (543)
.+++.++++++++++.+++.|++.|++.+...+....++.|++++++|++++++...+..+|..+++.+++.+.+. .+|
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV-WGW 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988765 899
Q ss_pred HHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhH-HHHH------HHHHhccCCCCcccchh-
Q 009099 261 RTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVS-EVML------DLTNAGQGSAEPEAGWF- 332 (543)
Q Consensus 261 r~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~- 332 (543)
|+.|++.++..++..+....+||++++..++++.++..+..+.....+... .... ......... ....+.
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 251 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGN--LQNAAIV 251 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhh--hcchhHH
Confidence 999987655544444444456776654322221111111111110000000 0000 000000000 000000
Q ss_pred ---------------hhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHH
Q 009099 333 ---------------DLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAV 394 (543)
Q Consensus 333 ---------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~ 394 (543)
...+.+.+. .........+..+........+.|.+++ +.|.+.... ......++.+++.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~ 330 (496)
T PRK03893 252 AVLGLLCAAIFISFMVQSSGKRWP-TGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCV 330 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000000111 1111111111111111223455666664 677776544 566677889999999
Q ss_pred HHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHH
Q 009099 395 ASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKA 474 (543)
Q Consensus 395 ~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 474 (543)
.|++.||+++|+.+..+..+..+..+.+.... ...........+...+.+.+..+....++.|.+|++.|+++
T Consensus 331 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 403 (496)
T PRK03893 331 GGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG-------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAG 403 (496)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc-------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcc
Confidence 99999999999988777655554443332210 01112222222222222333444555578899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHH
Q 009099 475 VALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVC 513 (543)
Q Consensus 475 ~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 513 (543)
+|+.+...++|+.++|.+.|.+.|..|+...+...++++
T Consensus 404 ~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 404 LGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred cchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 999999999999999999999999999887775555443
No 29
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=2.7e-33 Score=282.64 Aligned_cols=382 Identities=15% Similarity=0.034 Sum_probs=274.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 181 (543)
.|..+..++++.+....+.++++..+|.+.+|+|.+.++. +|+.+.|.+++.++++++|+++||+|||++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~--~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNEL--LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4567788899999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccC-CcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCch
Q 009099 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (543)
Q Consensus 182 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 260 (543)
+++++++++++|++.++++|+++|++.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.+. .+|
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~-~gw 160 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH-FYW 160 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCh
Confidence 999999999999999999999999999998888888887776 678999999999999999999999999999876 899
Q ss_pred HHHHHHhHHHHHHHHH-HhcccCCChhHHHhcCChHHHHHH------------HHHHhCchhhH-HH----------HHH
Q 009099 261 RTMFGLAAIPSILLAL-GMGLSPESPRWLFQQGKKSEAEKS------------IQTLYGKERVS-EV----------MLD 316 (543)
Q Consensus 261 r~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-~~----------~~~ 316 (543)
||.|++...+.++..+ ..+++||+++.. +++.+..... .+......... .. ...
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGL 238 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Confidence 9999998877766544 344457655311 1111111100 00000000000 00 000
Q ss_pred HHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHH
Q 009099 317 LTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTA 393 (543)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~ 393 (543)
....+ .+.+.+.--.+++|++.+....+..+..... .....++.+.+++. .|.++... ......++..++.+
T Consensus 239 f~~~e-~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~ 313 (495)
T PRK14995 239 FIRTQ-LAASRPMIDMRLFTHRIILSGVVMAMTAMIT----LVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGP 313 (495)
T ss_pred HHHHH-hcCCCCCcCHHHhCCcccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00011 1111122224677777665544433333322 33444555555554 67776544 56667788899999
Q ss_pred HHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhH
Q 009099 394 VASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAK 473 (543)
Q Consensus 394 ~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 473 (543)
+.|++.||+|+|+.+..+..+.+++.+++..... ..+.+......++.+.+.+.... .....+.+..|+++++.
T Consensus 314 ~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~l~G~g~g~~~~-~~~~~~~~~~~~~~~g~ 387 (495)
T PRK14995 314 IAGILVSRLGLRLVATGGMALSALSFYGLAMTDF-----STQQWQAWGLMALLGFSAASALL-ASTSAIMAAAPPEKAAA 387 (495)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHhHHHHHH-HHHHHHHhcCCHHhcch
Confidence 9999999999999888887777776665543211 11222233344444555443333 33336677889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 474 AVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 474 ~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
+.++.++..++|+.+|+.+.|.+.+.
T Consensus 388 ~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 388 AGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998764
No 30
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=8.9e-33 Score=270.71 Aligned_cols=364 Identities=19% Similarity=0.139 Sum_probs=259.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
|..+..+.+..+..........+.+|.+.+++|+++++. ++..+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~ 96 (394)
T PRK10213 19 WSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVA--GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT 96 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 444334444444444444455667899999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++.++++++++++.++++|+++|++.+...+....++.|++|+++|++++++...+.++|..++|.+++.+.+. .+||+
T Consensus 97 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~ 175 (394)
T PRK10213 97 LSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-IGWRN 175 (394)
T ss_pred HHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998866 79999
Q ss_pred HHHHhHHHHHHHHHHhc-ccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 263 MFGLAAIPSILLALGMG-LSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
.|++.+++.++..+... ..||.+++ + +. ...+.++.++++.++
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~---~-~~--------------------------------~~~~~~~~l~~~~~~ 219 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGE---P-SH--------------------------------QKQNTFRLLQRPGVM 219 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcc---c-cc--------------------------------chhHHHHHhcCHHHH
Confidence 99998877765544332 34654321 0 00 001123455666665
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH-
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS- 418 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~- 418 (543)
...+...+.... .+....+..|.+.++.|++... ......+++.+++.++.+++.||.++ +.+..+..+..+.
T Consensus 220 ~~~~~~~~~~~~---~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~ 295 (394)
T PRK10213 220 AGMIAIFMSFAG---QFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHH
Confidence 544433222222 1222333346666667777654 35666778899999999999999644 4433333332332
Q ss_pred HHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 419 MLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
+++.... .+.+......++.+.++.. ..+...+++.+..| +.++.+.++.....++|..+|+.+.|.+.|
T Consensus 296 ~~l~~~~--------~~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 296 LVLTLWG--------SDKIVATGVAIIWGLTFAL-VPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHh--------hhHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222221 1223333344444444433 23334435667777 446778888888889999999999999999
Q ss_pred hhccccchhhhhHHHHHHHHh
Q 009099 499 KFGISTVYLGFATVCLLAVLY 519 (543)
Q Consensus 499 ~~g~~~~~~~~~~~~~~~~~~ 519 (543)
..|+...+...+++.++..+.
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 366 NIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred ccChhhHHHHHHHHHHHHHHH
Confidence 999887777766655555443
No 31
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.2e-33 Score=279.48 Aligned_cols=386 Identities=18% Similarity=0.152 Sum_probs=272.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhh
Q 009099 114 ILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS 193 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 193 (543)
+...++...++...|.+.+++|.+..+. +++.+++.++..++++++|+++||+|||+++..+.++.+++.++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 81 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQY--GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGA 81 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhhH--HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcC
Confidence 3455666777889999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHH
Q 009099 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (543)
Q Consensus 194 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 273 (543)
++.++++|++.|++.+...+....++.|++|+++|++++++......+|.++++.+++.+.+. .+||+.|++.+++.++
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-FSWQWAFIIEGVLGII 160 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999887765 7899999998888776
Q ss_pred HHHHhcc-cCCChhHHHhcCChHHHHHH-HHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHH
Q 009099 274 LALGMGL-SPESPRWLFQQGKKSEAEKS-IQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFL 351 (543)
Q Consensus 274 ~~~~~~~-~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 351 (543)
..+..++ .||+++.. +...++.++. .+... .+ ....+..++++...++.++++.++...+...+..
T Consensus 161 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKA--KWLTEEEKYIVVGGLL---------AE-QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVN 228 (399)
T ss_pred HHHHhhheecCCCCcc--ccCCHHHHhhcchhhc---------cc-cccccccCCCccchHHHhcCHHHHHHHHHHHHHH
Confidence 5554444 46554311 1001111000 00000 00 0011112223445667777777665554444433
Q ss_pred HHHhhhhHHHHHHHHHHHH-HcCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHH-HHHHHHHHHHHHHHHHh
Q 009099 352 FQQLAGINAVVYYSTSVFR-SVGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTF-SFTGMAASMLLLSLSFT 427 (543)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~ 427 (543)
.. ......+.+.+.+ ..+.+... .......++.+++.++.|++.||++||+.... ......++.+.......
T Consensus 229 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (399)
T TIGR00893 229 IG----LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMF 304 (399)
T ss_pred hH----HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Confidence 32 3444555555544 35665543 35566778889999999999999999862111 11111111111111100
Q ss_pred hcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc-cccch
Q 009099 428 WKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG-ISTVY 506 (543)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g-~~~~~ 506 (543)
... ........+..... .++..+..+....+..|..|++.|+++.|+.+.+.++|..++|.+.|.+.|..| +...+
T Consensus 305 ~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~ 381 (399)
T TIGR00893 305 ATN--YVNIPYAALALVAL-GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGAL 381 (399)
T ss_pred Hhc--cchhHHHHHHHHHH-HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHH
Confidence 000 00112222222222 223333566777789999999999999999999999999999999999999988 88888
Q ss_pred hhhhHHHHHHHHhhh
Q 009099 507 LGFATVCLLAVLYIA 521 (543)
Q Consensus 507 ~~~~~~~~~~~~~~~ 521 (543)
.+.+++.+++.++.+
T Consensus 382 ~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 382 MVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877777665543
No 32
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=7.2e-33 Score=267.82 Aligned_cols=375 Identities=13% Similarity=0.036 Sum_probs=267.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 104 PFVGVACLGAILFGYHLGVVNGALEYLAK-DLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
..+.+..++.++........+++.+.+.+ ++|+|.++. +++.+++.+++.++.++.|++.||+|.|+++.++.++++
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~--g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQL--FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34555566667777778888889999876 899999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-----hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccC---
Q 009099 183 AGAFLCATA-----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA--- 254 (543)
Q Consensus 183 i~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~--- 254 (543)
+.+++++++ ++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+.
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999987 8999999999999998 7788999999999999999999999997666667655444332211
Q ss_pred --------------CCCCchHHHHHHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHH
Q 009099 255 --------------GNPLWWRTMFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTN 319 (543)
Q Consensus 255 --------------~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (543)
....+||..+++..++.++..++.++. ++.++ .+.
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~--------------------------- 240 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRA--------------------------- 240 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---ccc---------------------------
Confidence 012458998888888777766555544 33221 000
Q ss_pred hccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHH
Q 009099 320 AGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASS 397 (543)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 397 (543)
...+..+.+|++..|.+.+.+.+. ++.+..+.++.|++.++ .++.... ...+..+...+.++++|+
T Consensus 241 -------~~~~~~~vlk~~~~Wllslly~~t----FG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~ 308 (462)
T PRK15034 241 -------SIADQLPVLQRLHLWLLSLLYLAT----FGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGA 308 (462)
T ss_pred -------CHHHHHHHhCCCchhHHHHHHHHH----HHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHH
Confidence 011224566777766655554433 33466666677666654 2222222 234445778888999999
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccCh---------
Q 009099 398 LMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFAS--------- 468 (543)
Q Consensus 398 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------- 468 (543)
++||+|+++++.++.+.+.++.+.+...... ....+.+......+....+.+.+..++.- ++.+.+|+
T Consensus 309 LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~--~~~~~~~~~~~~~~~l~~~~G~gngsvfk-~ip~~f~~~~~~~~~~~ 385 (462)
T PRK15034 309 ISDKFGGVRVTLINFIFMAIFSALLFLTLPG--TGSGNFIAFYAVFMGLFLTAGLGSGSTFQ-MIAVIFRQITIYRVKMK 385 (462)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhcc--ccccHHHHHHHHHHHHHHHhcccchHHHH-hhHHHHhhhhhhccccc
Confidence 9999999999998887777666443332210 00011122222222222333333333333 56666663
Q ss_pred ------------hhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc-cccchhhhhHHHHHHHHhhheeccc
Q 009099 469 ------------RIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG-ISTVYLGFATVCLLAVLYIAVNVVE 526 (543)
Q Consensus 469 ------------~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (543)
++.|.+.|+....+.+|+++.|.++|...+..| +...|+.+.+..+++.++.|..+.+
T Consensus 386 ~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 386 GGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred ccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 257899999999999999999999999998877 6667888888888888887765543
No 33
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.7e-33 Score=276.78 Aligned_cols=368 Identities=13% Similarity=0.083 Sum_probs=265.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHH
Q 009099 104 PFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (543)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 183 (543)
.....+++..+..+......++.+|.+.+++|++.++. +++.+.+.+++.+++++.|++.||+|||+++..+.++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSM--SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34455567788888888888999999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHH
Q 009099 184 GAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTM 263 (543)
Q Consensus 184 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~ 263 (543)
+.++++++++++.++++|+++|++.+...+....++.|++|+++|+++++.......+|..++|.+.+.+.....+||+.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~ 164 (394)
T PRK03699 85 AVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWV 164 (394)
T ss_pred HHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 99999999999999999999999999999999999999999999999999998889999888888887765444799999
Q ss_pred HHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHH
Q 009099 264 FGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVV 343 (543)
Q Consensus 264 f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 343 (543)
|++.+++.++..+..++ .+.|+. +++++++ .++.. ++.+ ++..+..
T Consensus 165 f~~~~~~~~~~~~~~~~-~~~p~~--~~~~~~~--------------------------~~~~~----~~~~-~~~~~~~ 210 (394)
T PRK03699 165 YACIGLVYVAIFILTLF-SEFPAL--GKHAPKA--------------------------DKPVA----KEKW-GIGVLFL 210 (394)
T ss_pred HHHHHHHHHHHHHHHHh-cCCccc--cccCccc--------------------------cCccc----cccC-ChHHHHH
Confidence 99888877665544332 222210 0000000 00000 0111 2222222
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHH
Q 009099 344 SVGAALFLFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASML 420 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 420 (543)
.+...+.. ..+..+..|.|.+.+ ..+.+.... ......++.++++++.++++||+++|+.+.....+..+.++
T Consensus 211 ~~~~~~~~----~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 286 (394)
T PRK03699 211 AIAALLYI----LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMY 286 (394)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Confidence 22222222 224455567777764 467766543 55566788899999999999999999988776665555444
Q ss_pred HHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 009099 421 LLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF 500 (543)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 500 (543)
++... .+.....+..++.+.+.. +..+....+..+..|. .++...+......++|..++|.+.|.+.+..
T Consensus 287 ~~~~~--------~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~ 356 (394)
T PRK03699 287 LFVNT--------DDPSHLLYAILGLGFFSS-AIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHF 356 (394)
T ss_pred HHHHc--------CCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 43321 112222333333333322 2333444455666654 3677889999999999999999999999999
Q ss_pred ccccchhhhhHHHHHHHHhhh
Q 009099 501 GISTVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 501 g~~~~~~~~~~~~~~~~~~~~ 521 (543)
|++..++..+++.+++.++..
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 357 GLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred CchhhhhhhHHHHHHHHHHHH
Confidence 999988888877777655443
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=5.1e-33 Score=272.14 Aligned_cols=368 Identities=16% Similarity=0.127 Sum_probs=262.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH
Q 009099 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 186 (543)
..+++..+..+.......+.+|.+++|+|.+.++. |++.+++.+++.++++++|+++||+|||+++..+.++.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAA--GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHH--hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34456677777778888899999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHH
Q 009099 187 LCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (543)
Q Consensus 187 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 266 (543)
++++++|++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++.+++++.+. .+||+.|++
T Consensus 84 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~ 162 (382)
T PRK10091 84 MFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE-FSWRYTFLL 162 (382)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh-ccHHHHHHH
Confidence 9999999999999999999999988888888999999999999999999999999999999999888765 799999999
Q ss_pred hHHHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 267 AAIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 267 ~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
.+++.++..+. .+++||.++ +.+.+ .++ ..+.++++..+....
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~----~~~~~-~~~-------------------------------~~~~~~~~~~~~~~~ 206 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRD----EAKGG-LRE-------------------------------QFHFLRSPAPWLIFA 206 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCc----ccccC-HHH-------------------------------HHHHhcChHHHHHHH
Confidence 98877665443 344676532 10000 000 011233443333222
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLS 423 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 423 (543)
...+. ....+....+..+++.+..|.+.... .....+++.++++++.+++.||+++|+.+..+..+.+++.+++.
T Consensus 207 ~~~~~---~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~ 283 (382)
T PRK10091 207 ATMFG---NAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLF 283 (382)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHH
Confidence 22111 11112223333444444467766544 55667888999999999999999999988888777776665543
Q ss_pred HHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh-hcc
Q 009099 424 LSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK-FGI 502 (543)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~g~ 502 (543)
.... ..+...+..++.+.+......+.......+..|++.++.+. .+...++|.++||.+.|.+.|. .+|
T Consensus 284 ~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~ 354 (382)
T PRK10091 284 FFGG-------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAY 354 (382)
T ss_pred HHHh-------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCc
Confidence 3211 11222333333333332222222323444555555555543 4677899999999999999996 578
Q ss_pred ccchhhhhHHHHHHHHhhheecc
Q 009099 503 STVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
+..+.+.++++++.........+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 355 NYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred chHHHHHHHHHHHHHHHHHHHhh
Confidence 88888877766666554444333
No 35
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=271.15 Aligned_cols=359 Identities=18% Similarity=0.191 Sum_probs=256.7
Q ss_pred HHHHHHHHHHHHHhhhhHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 188 (543)
.+..+......++..|.+|. +.+++|.|..+. |++.+++.+++.++++++|+++||+|||++++.+.++..++.+.+
T Consensus 21 ~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~--g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (392)
T PRK12382 21 AFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMV--GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAY 98 (392)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHH--HHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 33445555667777788885 678999999999 999999999999999999999999999999999988877765433
Q ss_pred H---H-----hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCch
Q 009099 189 A---T-----AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (543)
Q Consensus 189 ~---~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 260 (543)
. + .++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.+++++.+. .+|
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~-~g~ 177 (392)
T PRK12382 99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH-FGF 177 (392)
T ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc-cCh
Confidence 2 1 368899999999999999988888889999999999999999999999999999999999888765 789
Q ss_pred HHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchh
Q 009099 261 RTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYW 340 (543)
Q Consensus 261 r~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 340 (543)
|+.+.+..+..++........||.++. ++++ .+.++.++ ..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------------------------------~~~~~~~~--~~ 218 (392)
T PRK12382 178 AALALTTMVLPLLAWAFNGTVRKVPAH---AGER----------------------------------PSLWSVVG--LI 218 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCC---cccC----------------------------------chHHHHHH--HH
Confidence 988776655444333322222332210 0000 00111111 01
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHH
Q 009099 341 KVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASML 420 (543)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 420 (543)
+...+...+.. ........+.+.++++.+.+..........++.+++.++.|++.||+++|+.+..+..+..++.+
T Consensus 219 ~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~ 294 (392)
T PRK12382 219 WKPGLGLALQG----VGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLL 294 (392)
T ss_pred HHhHHHHHHHH----HHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHH
Confidence 11111111111 11233444555556666666555555556777888999999999999999998888777777766
Q ss_pred HHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 009099 421 LLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF 500 (543)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 500 (543)
++... .+.+.......+.+.+.+. ..+.......|..|+++||++.|+.+...++|..++|.+.|.+.|+.
T Consensus 295 ~~~~~--------~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 365 (392)
T PRK12382 295 LLWLA--------PTAWVALAGAALTGAGCSL-IFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF 365 (392)
T ss_pred HHHHc--------ccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55432 1122333333444444332 23344446678889999999999999999999999999999999999
Q ss_pred ccccchhhhhHHHHHHHHhhhee
Q 009099 501 GISTVYLGFATVCLLAVLYIAVN 523 (543)
Q Consensus 501 g~~~~~~~~~~~~~~~~~~~~~~ 523 (543)
||+..|.+.+++.+++.++.+..
T Consensus 366 g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 366 GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred CchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888888777765543
No 36
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=3.7e-33 Score=276.82 Aligned_cols=381 Identities=16% Similarity=0.070 Sum_probs=278.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH--
Q 009099 113 AILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT-- 190 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-- 190 (543)
.++..+......+.+|.+.++++.+..+. |++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~ 103 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQV--GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNA 103 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHH
Confidence 44455556666778999999998888777 99999999999999999999999999999999998888887765543
Q ss_pred ---hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHh
Q 009099 191 ---AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLA 267 (543)
Q Consensus 191 ---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 267 (543)
.++++.+++.|++.|++.+...+...+++.|++|+++|+++.++......+|..+||.+++.+.+. .+|++.|++.
T Consensus 104 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-~~~~~~~~~~ 182 (417)
T PRK10489 104 FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA-GGVAWNYGLA 182 (417)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH-HhhHHHHHHH
Confidence 568899999999999998888888899999999999999999999999999999999999988755 6899999988
Q ss_pred HHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHH
Q 009099 268 AIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGA 347 (543)
Q Consensus 268 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 347 (543)
++..++..+..+.+|++++.. +++.+. .+. .+..++.+++++.++...+..
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~--~~~~~~-~~~--------------------------~~~~~~~~~~~~~~~~~~~~~ 233 (417)
T PRK10489 183 AAGTFITLLPLLRLPALPPPP--QPREHP-LRS--------------------------LLAGFRFLLASPVVGGIALLG 233 (417)
T ss_pred HHHHHHHHHHHHhCCCCCCCC--cccccc-hHH--------------------------HHHHHHHHHcChHHHHHHHHH
Confidence 877776666666677654311 000000 000 011223455566555444332
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHH-cCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHH
Q 009099 348 ALFLFQQLAGINAVVYYSTSVFRS-VGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSL 424 (543)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 424 (543)
.+... ......+.|.+.++ .+.+... .......++.+++.++.+++.||.++++.+..+..+.+++.+++..
T Consensus 234 ~~~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 308 (417)
T PRK10489 234 GLLTM-----ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL 308 (417)
T ss_pred HHHHH-----HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc
Confidence 22211 22334455666665 6666543 3556677888999999999999987777777777666666555433
Q ss_pred HHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcccc
Q 009099 425 SFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGIST 504 (543)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~ 504 (543)
. .+.....+..++++.+.+ ...+...+++.|..|++.||+++|+.+...++|..++|.+.|.+.+..|+..
T Consensus 309 ~--------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~ 379 (417)
T PRK10489 309 M--------PMWILAVLCLALFGYLSA-ISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVA 379 (417)
T ss_pred c--------chHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhh
Confidence 2 011222233333333322 1234445678899999999999999999999999999999999999999888
Q ss_pred chhhhhHHHHHHHHhhheecccCCCCCHHHHHHhc
Q 009099 505 VYLGFATVCLLAVLYIAVNVVETKGRSLEEIERAL 539 (543)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (543)
.+...+++.++..++.+...++.|+++.+|++++.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 380 SASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 88888877777666666777888888887776653
No 37
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=8.6e-33 Score=278.12 Aligned_cols=397 Identities=13% Similarity=0.063 Sum_probs=275.2
Q ss_pred cCcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH----------------------HcCCCcchhhHHHHHHHHHHHHH
Q 009099 98 SSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAK----------------------DLGIAENTVLQGWIVSSLLAGAT 155 (543)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~s~~~~~~g~~~s~~~l~~~ 155 (543)
..+.+|.++.+++++..+.+.++..++...+.+.+ |++++..+. |++.+.+.+++.
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~ 90 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQ--GLILSSHFYGQI 90 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHh--hHHHHHHHHHHH
Confidence 44556777778888888889999998888888877 788888888 999999999999
Q ss_pred HHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh--hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhH
Q 009099 156 VGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA--QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGS 233 (543)
Q Consensus 156 i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~ 233 (543)
+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.||+|+++|+++++
T Consensus 91 ~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 91 IIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 999999999999999999999999999998887654 568889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHH
Q 009099 234 VNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSE 312 (543)
Q Consensus 234 ~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (543)
+...+..+|.++++.+++.+.+...+||+.|++.+++.++..+..+++ +|+|+.. +...++..+..++
T Consensus 171 ~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~i~~--------- 239 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH--PCISKFEKKYINS--------- 239 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC--CCCCHHHHHHHHh---------
Confidence 999999999999999998887652499999999998887766655544 5655421 1111111111100
Q ss_pred HHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchh--HHHHHHHHHHH
Q 009099 313 VMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDV--AASALVGAANV 389 (543)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 389 (543)
...+++...+++.+++++++++..+...+..+.... .+..+..|.|.++++ .+.+... ....+..++.+
T Consensus 240 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~ 311 (465)
T TIGR00894 240 ----SLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFW----LYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAW 311 (465)
T ss_pred ----hcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHH
Confidence 000011111233467888888877666554443333 345566677766654 5666543 35566778889
Q ss_pred HHHHHHHHhhhccCChhHH--------HHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccc
Q 009099 390 FGTAVASSLMDRQGRKNLL--------TFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALL 461 (543)
Q Consensus 390 ~~~~~~g~l~d~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (543)
++.++.|+++||+++|+.. ..+......+..++..... .......+....+. .+......+.....
T Consensus 312 i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~-~~~~~~~~~~~~~~ 385 (465)
T TIGR00894 312 LCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYL-----SAAFYLTIIILTLA-NAVSSGPLAGVLIN 385 (465)
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCchHHHHHHHHHH-HHHhhhhhhhhhhc
Confidence 9999999999987543211 1111111111111111100 01112222222222 22222222333334
Q ss_pred cccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh---ccccchhhhhHHHHHHHHhhhe
Q 009099 462 LPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF---GISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 462 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~---g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
..|..|+ .+|.+.|+.++.+.++++++|.+.|.+.+.. +|...|.+.+++.+++.++...
T Consensus 386 ~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 386 SLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 5566664 7999999999999999999999999988753 3677788888777777665544
No 38
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=2e-32 Score=274.43 Aligned_cols=374 Identities=13% Similarity=0.089 Sum_probs=241.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHH
Q 009099 108 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL 187 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 187 (543)
......+...+......+..|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~ 117 (476)
T PLN00028 40 LSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDI--GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFC 117 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3344455555556667788999999999999988 99999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccC----C----CCCc
Q 009099 188 CATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA----G----NPLW 259 (543)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~----~----~~~~ 259 (543)
++++++++.++++|+++|++.+.. .....++.|++|+++|++++++.....++|..+++.+...+. + ...|
T Consensus 118 ~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g 196 (476)
T PLN00028 118 MSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA 196 (476)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Confidence 999999999999999999998764 445668899999999999999998777777666655443321 1 1258
Q ss_pred hHHHHHHhHHHHHHHHHHhcccCCC-hhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccc
Q 009099 260 WRTMFGLAAIPSILLALGMGLSPES-PRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSR 338 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (543)
||+.|++.+++.++..+..++++++ |+. +.++..+ + ...++.+....+++.++++
T Consensus 197 Wr~~f~i~g~l~l~~~l~~~~~~~~~p~~-----~~~~~~~---~----------------~~~~~~~~~~~~~~~~~~~ 252 (476)
T PLN00028 197 WRIAFFVPGLLHIIMGILVLTLGQDLPDG-----NYRELKK---S----------------GTMPKDSFSKVLRYGVTNY 252 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCcCCCC-----chhhHHh---c----------------CccccccHHHHHHHHHcCc
Confidence 9999999998887766655555433 320 0000000 0 0000000112234556666
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChh-----HHH-
Q 009099 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKN-----LLT- 409 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~-----~~~- 409 (543)
..+...+..+..... ......+.|.++ +..|++.... ...+..++.++++++.|+++||++||+ ...
T Consensus 253 ~~~~~~~~~~~~~~~----~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~ 328 (476)
T PLN00028 253 RTWILALTYGYSFGV----ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWAL 328 (476)
T ss_pred hhHHHHHHHHHHHHH----HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHH
Confidence 655544433322222 223344444444 4457766543 566678899999999999999998652 111
Q ss_pred -HHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHH
Q 009099 410 -FSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFV 488 (543)
Q Consensus 410 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 488 (543)
....+..+.++++... .+.....+..++++.+... ..+..+.+..+..| +.+|++.|+.+..+++|+++
T Consensus 329 ~~~~~l~~i~~~~~~~~--------~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i 398 (476)
T PLN00028 329 WIVQTLGGVFCIWLGRA--------NSLGAAIVVMILFSIFVQA-ACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVL 398 (476)
T ss_pred HHHHHHHHHHHHHhccc--------chHHHHHHHHHHHHHHHHH-hhhhhcccCcccCh-hhchhhhhhhhccccHHHHH
Confidence 1211111211211110 0112222223333333222 12233345556554 67999999998888888877
Q ss_pred HHHhhHHHHHhhccccchhhhhHHHHHHHHhhhee
Q 009099 489 IGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVN 523 (543)
Q Consensus 489 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 523 (543)
+|.+.+ ..+..+|...|.+.+++.+++.++.++.
T Consensus 399 ~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 399 TQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 776654 1123458888888887777776665544
No 39
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=4.1e-33 Score=278.02 Aligned_cols=390 Identities=15% Similarity=0.149 Sum_probs=262.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 181 (543)
.|.++..+++...........++..+|.+.+++|.+.++. +++.+.+.++..++.+++|+++||+|||++++.++++.
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSET--AWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHH--HHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 3555555555555444444556778999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHH-HHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCch
Q 009099 182 AAGAFLCATAQSVQTMII-GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (543)
Q Consensus 182 ~i~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 260 (543)
++++++++++++++.+++ .|++.|++.+...+....++.++++ ++|++++++...+..+|..++|.+++.+.+. .||
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-~gw 172 (455)
T TIGR00892 95 SLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES-FGW 172 (455)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-hCh
Confidence 999999999999999875 5699999998777777888899996 6799999999999999999999998888765 799
Q ss_pred HHHHHHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccch
Q 009099 261 RTMFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRY 339 (543)
Q Consensus 261 r~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (543)
|+.|++.+++.++..+..+++ ++.+.....+.+.++ ........++ .+.....+...+....++++++.
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKE------GLPPDGSTKK----LSKKSTAEKINRFLDFSLFTHRG 242 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccc------cCCCCCcccc----ccccchhhhhhhhcchHHhcCch
Confidence 999999998877655444343 322110000000000 0000000000 00000000000111124667777
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhcc--CChhHHHHHHHHH
Q 009099 340 WKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQ--GRKNLLTFSFTGM 415 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~~~~ 415 (543)
++.......+.... +.....+.+.+.++.+++.... .....+++.++++++.+++.||. ++++.........
T Consensus 243 ~~~~~~~~~l~~~~----~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 318 (455)
T TIGR00892 243 FLVYLSGNVIMFLG----FFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL 318 (455)
T ss_pred HHHHHHHHHHHHHH----ccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH
Confidence 66555544433332 3334455566666677766544 55667788889999999999973 3343333322222
Q ss_pred --HHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhh
Q 009099 416 --AASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYF 493 (543)
Q Consensus 416 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 493 (543)
.++.+++... .+.+..++..++.+.+++ ...+....++.|.+|++.+++++|+++...++|.+++|.+.
T Consensus 319 ~~~l~~ll~~~~--------~~~~~~~i~~~~~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 389 (455)
T TIGR00892 319 FNGLTHLLCALA--------GDYTGLVIYCIFFGLSFG-SVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHHHHHh--------chHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce
Confidence 2222222211 122333334444444433 23445556788899999999999999999999999999999
Q ss_pred HHHHHhhc-cccchhhhhHHHHHHHH
Q 009099 494 LSVVNKFG-ISTVYLGFATVCLLAVL 518 (543)
Q Consensus 494 g~~~~~~g-~~~~~~~~~~~~~~~~~ 518 (543)
|.+.|..| |...|.+.+++.+++.+
T Consensus 390 G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 390 GRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999875 88888887777666554
No 40
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=5.3e-32 Score=267.72 Aligned_cols=368 Identities=18% Similarity=0.115 Sum_probs=268.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhh
Q 009099 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDA 178 (543)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~ 178 (543)
+++.++....+.+..+...+....+.+.+|.+.+++|.+..+. ++..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWV--PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 3556777777788888888888888999999999999999888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009099 179 VPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (543)
Q Consensus 179 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 258 (543)
++.+++.++++++++++.+++.|+++|++.+...+....++.|++++++|.+++++......+|..++|.+++.+.+. .
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~ 164 (406)
T PRK15402 86 AFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-L 164 (406)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-c
Confidence 999999999999999999999999999999988888899999999999999999999888889999999999888765 7
Q ss_pred chHHHHHHhHHHHHHHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhcc
Q 009099 259 WWRTMFGLAAIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSS 337 (543)
Q Consensus 259 ~wr~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 337 (543)
+||+.|++.++..++..+.. +..||+++.. +++.+..+ ...++++++++
T Consensus 165 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------------------------~~~~~~~~~~~ 214 (406)
T PRK15402 165 PWRGMFVLFAALAALSFFGLWRAMPETAGRV---GEKLSLKE---------------------------LGRDYKLVLKN 214 (406)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCCccc---cccccHHH---------------------------HHHHHHHHHcC
Confidence 89999999888877655543 3456654311 00000000 01123456677
Q ss_pred chhHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHH
Q 009099 338 RYWKVVSVGAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTG 414 (543)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 414 (543)
+.++...+...+.... ......+.|.++ +..+.++... ......++.+++.++.+++.||+++|+.+..+..+
T Consensus 215 ~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~ 290 (406)
T PRK15402 215 RRFVAGALALGLVSLP----LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWP 290 (406)
T ss_pred cHHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 7766555444333222 122233344443 4467766543 33445567888999999999999999998888777
Q ss_pred HHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhH
Q 009099 415 MAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFL 494 (543)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 494 (543)
.+++.+++....... .....+......+++.+.+.... ......... +++++|++.++++....++..+|+.+.+
T Consensus 291 ~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~g~g~~~~~~-~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 291 MVAGLLLAALATVIS---SHAYLWLTAGLSLYAFGIGLANA-GLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred HHHHHHHHHHHHHcc---cccHHHHHHHHHHHHHHHHHHhh-hHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766665532111 11222333444444444443222 222223233 4478999999999999999999999999
Q ss_pred HHHHhhccccchhh
Q 009099 495 SVVNKFGISTVYLG 508 (543)
Q Consensus 495 ~~~~~~g~~~~~~~ 508 (543)
.+.+..+.......
T Consensus 366 ~l~~~~~~~~~~~~ 379 (406)
T PRK15402 366 HAYLGGGNGLFNLF 379 (406)
T ss_pred hcccCCchHHHHHH
Confidence 99888775443333
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=2.2e-31 Score=260.66 Aligned_cols=359 Identities=14% Similarity=0.124 Sum_probs=260.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH
Q 009099 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 185 (543)
+..+.++.+..........+.+|.+.+++|.+..+. |++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQV--GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456777788888899999999999999998888 999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHH
Q 009099 186 FLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFG 265 (543)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 265 (543)
+++++++|++.++++|+++|++.+...+.....+.+..++++|+++++++..+.++|..+|+.+++.+.+. ..|... +
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~-~ 163 (381)
T PRK03633 86 AGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE-LMSVLP-W 163 (381)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-ccchHH-H
Confidence 99999999999999999999999988888888888899999999999999999999999999999988653 222222 2
Q ss_pred HhHHHHHHHH-HHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHH
Q 009099 266 LAAIPSILLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVS 344 (543)
Q Consensus 266 ~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 344 (543)
..+....... +.....+++++ ++ ++..+..+.++++.++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~------~~-------------------------------~~~~~~~~~~~~~~~~~~~ 206 (381)
T PRK03633 164 VTGLVLAAILPLLFTRILNQQA------EN-------------------------------HDSTSIWPMLKLRQARLGV 206 (381)
T ss_pred HHHHHHHHHHHHHHhcccCCCC------CC-------------------------------CCCCCHHHHHHhcchHHHH
Confidence 2222222111 11111121110 00 0111234455666555433
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHH
Q 009099 345 VGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLL 422 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 422 (543)
......... +.....+.|.+.++.+.+.... ......++.+++++..|++.||+++|+.+..+..+..++.+.+
T Consensus 207 ~~~~~~~~~----~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 282 (381)
T PRK03633 207 NGCIISGIV----LGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 222222221 2333445677777777765533 4556677888999999999999999998887777766655443
Q ss_pred HHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcc
Q 009099 423 SLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGI 502 (543)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~ 502 (543)
.. . ........+.+.+.. ...|.....+.|..|+++++.+.+..+...++|..++|.+.|.+.|+.|+
T Consensus 283 ~~----------~-~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~ 350 (381)
T PRK03633 283 LS----------Q-AAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD 350 (381)
T ss_pred hh----------h-HHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 21 0 111122222332222 33455666778888888888888888888999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHhhh
Q 009099 503 STVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~ 521 (543)
...|.+.+++.++..+..+
T Consensus 351 ~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 351 NLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 8888888877776655443
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.2e-32 Score=274.30 Aligned_cols=403 Identities=13% Similarity=0.097 Sum_probs=266.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 181 (543)
++..+..+.+...........+....|.+++ +|++.++. +++.+++.++..+++++.|+++||+|||++++.+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGEL--GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHh--HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3455555556666666666666677888876 59999988 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh----hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCC
Q 009099 182 AAGAFLCATA----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP 257 (543)
Q Consensus 182 ~i~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~ 257 (543)
+++.+++++. ++++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+.+......
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9998887764 567888899999999999988888999999999999999999999999999888877665443333
Q ss_pred CchHHHHHHhHHHHHHHH-HHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccc-hhhhh
Q 009099 258 LWWRTMFGLAAIPSILLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAG-WFDLF 335 (543)
Q Consensus 258 ~~wr~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 335 (543)
.+||+.|++.+++.++.. +..+++||+|+....+ +.++.++ +. ... ..++.+.+.+.+.. ...++
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~--~~~-------~~~~~~~~~~~~~~~~~~~~ 248 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP-PIEEYRN---DY--PDD-------YNEKAEQELTAKEIFMQYVL 248 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC-Cchhccc---cc--ccc-------cccccccccchHHHHHHHHc
Confidence 689999999888877654 4445567776531100 0000000 00 000 00000000000111 12356
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHH
Q 009099 336 SSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSF 412 (543)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 412 (543)
+++.++...+...+.... ...+..|.|.++++ .|.+... .......++.+++.++.|++.||+++++....+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 324 (438)
T TIGR00712 249 PNKLLWYIAIANVFVYLL----RYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGV 324 (438)
T ss_pred cCchHHHHHHHHHHHHHH----HHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHH
Confidence 667666654443333322 34455667777665 4666543 3556677888999999999999996543222232
Q ss_pred HHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHH-HHHHH
Q 009099 413 TGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISN-FVIGL 491 (543)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~ 491 (543)
....+........... ...+.+......+.++.+. .+..........|.+|++.||+++|+.+...++++ +++|.
T Consensus 325 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~ 400 (438)
T TIGR00712 325 FFMTLVTIAVIVYWMN---PAGNPLVDMICMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASA 400 (438)
T ss_pred HHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHH-ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcch
Confidence 2222211111111000 0011121112222222211 11112222356788999999999999999988875 68999
Q ss_pred hhHHHHHhhccccchhhhhHHHHHHHHhhheecccCC
Q 009099 492 YFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETK 528 (543)
Q Consensus 492 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (543)
+.|.+.|..|+...+.+.+++.+++.+..+..++|.|
T Consensus 401 l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 401 IVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999998888888887777777677655
No 43
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=6e-32 Score=267.46 Aligned_cols=381 Identities=20% Similarity=0.276 Sum_probs=265.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
+.+..+...++..+..+++.....+..|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+++..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL--GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH--HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34555556666777778888888889999999999998888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCch
Q 009099 181 LAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (543)
Q Consensus 181 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 260 (543)
.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+. .+|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~g~ 170 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-FGW 170 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888765 799
Q ss_pred HHHHHHhHHHHHHH-HHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccch
Q 009099 261 RTMFGLAAIPSILL-ALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRY 339 (543)
Q Consensus 261 r~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (543)
|+.|++.++..++. .+...++||++++...+ ++++..+..++.......+.. ....+..+..+..+..++.+++++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ-SALPEQKATQGTKRSVFKALFQGKT 248 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc-ccccccccccchhhHHHHHHhcchh
Confidence 99999887555543 44455578877654333 222222222211110000000 0000000000011111222333333
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHH
Q 009099 340 WKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAA 417 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 417 (543)
.+......... +.....+.....+.|.+.++.+.+.... ......++.+++.++.+++.||+++|+... ...+..+
T Consensus 249 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~ 326 (398)
T TIGR00895 249 ARITVLLWLLY-FMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAV 326 (398)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHH
Confidence 33322222222 2223334556667777777777766533 556677889999999999999999984433 3333333
Q ss_pred HHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHH
Q 009099 418 SMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSV 496 (543)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 496 (543)
...++... . .+........++.+.+.+. ..+....++.|.+|++.|+++.|+.+.+.++|..++|.+.|.+
T Consensus 327 ~~~~~~~~-~------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 327 FAVLVGST-L------FSPTLLLLLGAIAGFFVNG-GQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHH-h------hCHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 33332221 0 1222333334444444332 3445566889999999999999999999999999999999875
No 44
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.3e-31 Score=270.44 Aligned_cols=380 Identities=18% Similarity=0.146 Sum_probs=268.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH
Q 009099 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 186 (543)
.+++++.+...++...+++.+|.+.+++|.+..+. +++.+.+.++..++.+++|+++||+|||++++.+.++++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 13 WIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHM--HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34456677788888888899999999999999888 9999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHH
Q 009099 187 LCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (543)
Q Consensus 187 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 266 (543)
+++++++++.++++|+++|++.+...+....++.|++|+++|+++.++.....++|..++|.+++.+.+. .+||+.|++
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~-~gw~~~f~~ 169 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY-ASWHWIFLI 169 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-ccHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998876 799999999
Q ss_pred hHHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHH---------HHhCchh---hHHHH-----------HHHHHhcc
Q 009099 267 AAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQ---------TLYGKER---VSEVM-----------LDLTNAGQ 322 (543)
Q Consensus 267 ~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~-----------~~~~~~~~ 322 (543)
......+..+.... .|+.+. .+.+.+....... ...+.+. ..... .....++.
T Consensus 170 ~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (471)
T PRK10504 170 NIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR 246 (471)
T ss_pred HHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 87776655444333 344332 1111111110000 0000000 00000 00000111
Q ss_pred CCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhh
Q 009099 323 GSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLM 399 (543)
Q Consensus 323 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~ 399 (543)
..+++..+ .++++++.+.......++.... ......+.|++++. .|.++... ......++.+++.++.+++.
T Consensus 247 ~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 321 (471)
T PRK10504 247 NNNRALFS-LKLFRTRTFSLGLAGSFAGRIG----SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVV 321 (471)
T ss_pred cCCCCccC-HHHhcccchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222 3578888877765555544433 33445556666553 66665544 44555666777788999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHH
Q 009099 400 DRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSL 479 (543)
Q Consensus 400 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 479 (543)
||+++|+.+..+..+.++..+++.+... ....+.......+.+.+.+.... ....+..+..|++.++.++|+.+
T Consensus 322 ~r~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~ 395 (471)
T PRK10504 322 NRFGYRRVLVATTLGLALVSLLFMLVAL-----LGWYYLLPFVLFLQGMVNSTRFS-SMNTLTLKDLPDNLASSGNSLLS 395 (471)
T ss_pred HHcCchHHHHHHHHHHHHHHHHHHhccc-----cccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCHHhccchHHHHH
Confidence 9999999998888777776665544210 01111112223333333332222 33446778889999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHhhccc
Q 009099 480 GMHWISNFVIGLYFLSVVNKFGIS 503 (543)
Q Consensus 480 ~~~~~g~~~~~~~~g~~~~~~g~~ 503 (543)
+...+|..+|+.+.|.+.+..|+.
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999887763
No 45
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-33 Score=258.66 Aligned_cols=429 Identities=22% Similarity=0.260 Sum_probs=308.8
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHc-CCC-------cchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcc
Q 009099 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDL-GIA-------ENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR 170 (543)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~s-------~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 170 (543)
.++....+.+..++.+.+.++...++.+.|-+...+ |.+ .... +.+..+-.+|..+||+++|++.||+||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~--~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVL--ALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHH--HHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 344566777788899999999999999998887665 322 3333 889999999999999999999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHhh-------hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHH
Q 009099 171 TRTFQLDAVPLAAGAFLCATAQ-------SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGI 243 (543)
Q Consensus 171 r~~~~~~~~~~~i~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 243 (543)
|+++...++++.++++++++.. -.+++...|+++|+|.|+-+|...++.+|...+++||...+.+.+..++|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 9999999999999999888752 257788999999999999999999999999999999998888777777776
Q ss_pred HHHHHhhcccC----CC----------CCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCCh-HHHHHHHHHHhCch
Q 009099 244 LAALVAGLPLA----GN----------PLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKK-SEAEKSIQTLYGKE 308 (543)
Q Consensus 244 ~~~~~~~~~l~----~~----------~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~ 308 (543)
+.|.+++..+. .. ..-||..|.+.+++++++....+.+||++++.....++ +.+. .+..+..
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~ 270 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDMKKVL 270 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcccccc
Confidence 66655543322 10 02399999999999999888888899999876333222 2221 1111111
Q ss_pred hhHHHHHHHHHhccCCCCcccc---hhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH------
Q 009099 309 RVSEVMLDLTNAGQGSAEPEAG---WFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA------ 379 (543)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 379 (543)
.. ..++....+...+.++.+ +...+..+ .-..+++.+..++..-..++....+...+++..|..+...
T Consensus 271 ~~--~~~~~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~ 347 (538)
T KOG0252|consen 271 SV--DIEAESTAESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELF 347 (538)
T ss_pred cc--ccchhhccccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHH
Confidence 11 111111111122222222 22233223 2244555555555555556667777777777666544322
Q ss_pred -----HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCc
Q 009099 380 -----ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGA 454 (543)
Q Consensus 380 -----~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (543)
...+...+.++|..+..+++|++|||+..+.+++++.+..+.++..... ........+...+..++...+.
T Consensus 348 ~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~----~~~~~Gf~v~y~l~~ff~NFGP 423 (538)
T KOG0252|consen 348 KVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ----LENTIGFVVLYSLTFFFGNFGP 423 (538)
T ss_pred HHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc----ccccCceeehHHHHHHHHhcCC
Confidence 1122233444566777889999999999999999999988888765332 1122333344444455556667
Q ss_pred ccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH-----hhccccchhhhhHHHHHHHHhhheecccCCC
Q 009099 455 GPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN-----KFGISTVYLGFATVCLLAVLYIAVNVVETKG 529 (543)
Q Consensus 455 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (543)
+.....+.+|.+|.+.|+++.|+....+-.|++++...+.++.+ ..|.+.++++++++++++.+..+ +.||+++
T Consensus 424 n~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk~ 502 (538)
T KOG0252|consen 424 NATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL-LIPETKG 502 (538)
T ss_pred CceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeE-Eeecccc
Confidence 77777789999999999999999999999999999999999999 77889999999999999887654 4669999
Q ss_pred CCHHHHHHhcC
Q 009099 530 RSLEEIERALN 540 (543)
Q Consensus 530 ~~~~~~~~~~~ 540 (543)
++++|++.+.+
T Consensus 503 ~~leei~~e~~ 513 (538)
T KOG0252|consen 503 KSLEEISNEEE 513 (538)
T ss_pred cCHHHhcChhh
Confidence 99998865543
No 46
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.6e-31 Score=271.26 Aligned_cols=381 Identities=18% Similarity=0.213 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHH
Q 009099 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG 184 (543)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 184 (543)
.+..++++.+...++....++.+|.+.+++|.+.++. +++.+.+.++..++.++.|+++||+|||++++.+.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQV--QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh--hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3455677788888999999999999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHH
Q 009099 185 AFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (543)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 264 (543)
.+++++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..++|.+++++.+. .+||+.|
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~w~~~f 159 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-YHWRWIF 159 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC-cCceehh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876 8999999
Q ss_pred HHhHHHHHHHHHHh-cccCCChhHHHhcCChHHHHHHH------------HHHhCch--hhHHHHH----------HHHH
Q 009099 265 GLAAIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSI------------QTLYGKE--RVSEVML----------DLTN 319 (543)
Q Consensus 265 ~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~------------~~~~~~~--~~~~~~~----------~~~~ 319 (543)
++.+++.++..+.. +++||+++. .+++.+.....+ .+-.... ....... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVV 237 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 99887776655443 344654331 111111110000 0000000 0000000 0000
Q ss_pred hccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHH
Q 009099 320 AGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVAS 396 (543)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g 396 (543)
.+. +.+++....++++++.++...+..++..+. +....++.|.++++ .|.++... ......++.+++.++.|
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g 312 (485)
T TIGR00711 238 WEL-TDDNPLVDLRLFKYRNFTIGCVYMSLLGLG----LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAG 312 (485)
T ss_pred HHH-cCCCCccCHHHHcCCChHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011 111112223567777766655444444333 33444556666554 57666544 55667788899999999
Q ss_pred HhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHH
Q 009099 397 SLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVA 476 (543)
Q Consensus 397 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 476 (543)
++.||++||+.+..+..+.+++..++.+... .....+.......+.+.+.+....+... ...+..|+++++++.|
T Consensus 313 ~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~g~~~~~~~~~~-~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 313 RMGDKIDPRKLVTIGLILYAVGFYWRAFTFT----PDTPFLAIALPQFIRGFGMGCFFMPLTT-IALSGLPPHKIARGSS 387 (485)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHhHHHH
Confidence 9999999999988888777777666542211 1112222333344444444433333333 5567789999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhh
Q 009099 477 LSLGMHWISNFVIGLYFLSVVNKF 500 (543)
Q Consensus 477 ~~~~~~~~g~~~~~~~~g~~~~~~ 500 (543)
+.++.+++|+.+|+.+.+.+.++.
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998753
No 47
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-33 Score=259.94 Aligned_cols=380 Identities=17% Similarity=0.133 Sum_probs=266.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhH
Q 009099 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (543)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~ 179 (543)
+..+..+.++++...++.++...+....+.+++.||++++.. |++.+.+.+.+.+++|+.|+++|||.||+++.+|..
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~--Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSEL--GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhc--cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH
Confidence 344567778899999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc
Q 009099 180 PLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW 259 (543)
Q Consensus 180 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 259 (543)
+|.++.++++++..||+++++|.+.|+|.+...+.++.+++|.+|..+|++++++++.+..+|..+|.+.+..+......
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877566
Q ss_pred hHHHHHHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccc
Q 009099 260 WRTMFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSR 338 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (543)
|||.|+..+++++++.++.+++ +|+++-. +++.+...+ ..........+.+.+.+++
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga--~~~~~~~~~--------------------~~~~~ts~~kDl~~l~~~~ 244 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGA--RDEVDGENK--------------------MVKPFTSVWKDLKVLAKIK 244 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCccccc--ccccccCCc--------------------CCCCccchHHHHHHHHccC
Confidence 9999999999999877766555 5543310 000000000 0000001112233444545
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCC--CchhHHHHHHHHHHHHHHHHHHHhhhccCCh----hHHHHHH
Q 009099 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGI--ESDVAASALVGAANVFGTAVASSLMDRQGRK----NLLTFSF 412 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~~~~~~ 412 (543)
.+....+.+....+...+.-.+.+.+.++..+-.+. +....+..+..+++.+|.+++|.++||+.++ .......
T Consensus 245 v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q 324 (493)
T KOG1330|consen 245 VFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQ 324 (493)
T ss_pred ceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHH
Confidence 555555555555554444344444444444443443 3334466777888999999999999994321 1122222
Q ss_pred HHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHH-HHH
Q 009099 413 TGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFV-IGL 491 (543)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~ 491 (543)
+..+.+......................+.+++++............-+..|++|++.|.++.++-..+..+.+-. +|+
T Consensus 325 ~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ 404 (493)
T KOG1330|consen 325 LSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPY 404 (493)
T ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcc
Confidence 2111111111111000001111223333444444444444344444447789999999999999988887665544 555
Q ss_pred hhHHHHHhh-ccc
Q 009099 492 YFLSVVNKF-GIS 503 (543)
Q Consensus 492 ~~g~~~~~~-g~~ 503 (543)
+.|.+.|+. |++
T Consensus 405 ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 405 IVGILSDKLRGYK 417 (493)
T ss_pred eehhHHHHhhCCC
Confidence 999998864 444
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.9e-31 Score=260.56 Aligned_cols=351 Identities=13% Similarity=0.057 Sum_probs=260.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 189 (543)
..+.+...+......+.+|.+..+++.+..+. +++.+++.++..++++++|+++||+|||++++.+.++.+++.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVL--SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 45566666777777889999999999998888 9999999999999999999999999999999999999999998888
Q ss_pred Hhh-----hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHH
Q 009099 190 TAQ-----SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (543)
Q Consensus 190 ~~~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 264 (543)
+++ +++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~g~~~~~ 161 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-LGIKWAI 161 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHH
Confidence 887 9999999999999999999999999999999999999999999999999999999999988765 7999999
Q ss_pred HHhHHHHHHHHHHhccc--CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHH
Q 009099 265 GLAAIPSILLALGMGLS--PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKV 342 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 342 (543)
++.++..++..+..+++ ||+++. ++++...+..++ .+..++++++++.++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 214 (365)
T TIGR00900 162 WVDAVGFAISALLIVSVRIPELAAS----EIQALSNAVLRD-----------------------TREGIKFVLKNPLLRT 214 (365)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCc----cccccchhHHHH-----------------------HHhHHHHHHcCcHHHH
Confidence 98887666554444333 332210 000000000000 1122455667777665
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHH
Q 009099 343 VSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASM 419 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 419 (543)
..+...+...... .....+.|.+.++ .+.+.... ......++.+++.++.+++.||.+||+.+..+..+.+++.
T Consensus 215 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 291 (365)
T TIGR00900 215 LLLLALLFNLVFA---PAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAI 291 (365)
T ss_pred HHHHHHHHHHHHH---HHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Confidence 5554444333221 1222445555554 56655433 5566778889999999999999999998887766666665
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
+.+.+.. + +.+...+..++.+.+.+. ..+....++.|..|++.|+++.|+.+...+++..++|.+.|.+.|.
T Consensus 292 ~~~~~~~------~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 292 LVVGLTP------P-NFPLFLVLWFAIGVGYGP-INVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHhhc------h-hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554421 0 122333334444444432 3455566888999999999999999999999999999999999987
Q ss_pred hc
Q 009099 500 FG 501 (543)
Q Consensus 500 ~g 501 (543)
.|
T Consensus 364 ~g 365 (365)
T TIGR00900 364 LG 365 (365)
T ss_pred cC
Confidence 64
No 49
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3.2e-32 Score=267.50 Aligned_cols=371 Identities=15% Similarity=0.136 Sum_probs=253.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh
Q 009099 113 AILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ 192 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 192 (543)
.+...++...++...|.+.+++|.+..+. +++.+++.++..+++++.|+++||+|||++++.+.++.+++.+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDL--GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHH--HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 45566677788889999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHH-HhhcccCCCCCchHHHHHHhHHHH
Q 009099 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL-VAGLPLAGNPLWWRTMFGLAAIPS 271 (543)
Q Consensus 193 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~-~~~~~l~~~~~~wr~~f~~~~~~~ 271 (543)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ ++++.+.+. .+||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWVFIVPGIIA 160 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 466555544 78999999988777
Q ss_pred HHHHH-HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHH
Q 009099 272 ILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALF 350 (543)
Q Consensus 272 ~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (543)
++..+ ..++.+|+++....++.++...+ ..+ .+.+.+++.....+..++++++++..+...+...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNE------EPD------GDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFV 228 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCccc------ccc------cccccccccccchHHHHHHHHhcchHHHHHHHHHHH
Confidence 66544 44445666542111000000000 000 000000001111222345667777766655544443
Q ss_pred HHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHh
Q 009099 351 LFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFT 427 (543)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 427 (543)
... ......+.+.+.+ ..+.+.... ......++.+++.++.+++.||..+++...............+.....
T Consensus 229 ~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
T TIGR00881 229 YVV----RTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL 304 (379)
T ss_pred HHH----HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Confidence 332 3344445555543 456665433 556677888999999999999864332222221111111111111100
Q ss_pred hcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccch
Q 009099 428 WKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVY 506 (543)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~ 506 (543)
. ...+........++.+. ...+..+....+..|..|++.|+++.|+.+...++|+.++|.+.|.+.|..||+..|
T Consensus 305 ~---~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 305 N---PAANPLMDLICLFALGF-LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred C---cchhHHHHHHHHHHHHH-HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 0 00111222222222222 222333344457889999999999999999999999999999999999999987654
No 50
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=2e-30 Score=255.61 Aligned_cols=372 Identities=15% Similarity=0.126 Sum_probs=255.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
....+...+.+..+...++.....|.+|.+.+++|.+.++. ++..+++.+++.++++++|+++||+|||++++.+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 90 (413)
T PRK15403 13 ATLFFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLA--PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALI 90 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHH
Confidence 33444555566677788888999999999999999999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCch
Q 009099 181 LAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (543)
Q Consensus 181 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~w 260 (543)
++++++++++++|++.++++|+++|++.+...+....++.|++++++|++++++......+|..+||++++.+.+. .+|
T Consensus 91 ~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-~gw 169 (413)
T PRK15403 91 FTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-VHW 169 (413)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCH
Confidence 9999999999999999999999999998876677778899999999999999999999999999999999888755 799
Q ss_pred HHHHHHhHHHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccch
Q 009099 261 RTMFGLAAIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRY 339 (543)
Q Consensus 261 r~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (543)
|+.|++.+++.++..+. .+++||+++. ++++..... ...+++++++++.
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~~~~~---------------------------~~~~~~~ll~~~~ 219 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVPFSAKS---------------------------VLRDFRNVFRNRL 219 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCCCChHH---------------------------HHHHHHHHHcCHH
Confidence 99999998887766554 4446876531 111000000 0112356677777
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHH
Q 009099 340 WKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMA 416 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 416 (543)
++...+...+.... +.....+.|.++++ .+.+.... .......+.+++..+.+++.++..+++.......+..
T Consensus 220 ~~~~~l~~~~~~~~----~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 295 (413)
T PRK15403 220 FLTGAATLSLSYIP----MMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQL 295 (413)
T ss_pred HHHHHHHHHHHHHH----HHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHH
Confidence 77655544433332 33444455655554 46766644 3344556677777777776655444444333333333
Q ss_pred HHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccc-cccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHH
Q 009099 417 ASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPA-LLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLS 495 (543)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 495 (543)
++..++....... ........+..++++.+.+........ ++... ...+|++.++.+.....+..+++...++
T Consensus 296 ig~~l~~~~~~~~---~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~---~~~~G~a~a~~~~~~~~~~~~~~~~~g~ 369 (413)
T PRK15403 296 VGLALLIVGNLLW---PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSN---NLPKGTVSASLNMVILMVMAVSVEIGRW 369 (413)
T ss_pred HHHHHHHHHHHHc---cccHHHHHHHHHHHHHHHHHHhHHHHHHHhccC---CCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433333221110 111112233444444444432222221 12212 2237999999999999999999999988
Q ss_pred HHHhhccccchhhhhHHHHHH
Q 009099 496 VVNKFGISTVYLGFATVCLLA 516 (543)
Q Consensus 496 ~~~~~g~~~~~~~~~~~~~~~ 516 (543)
+.+. +....|...++++.+.
T Consensus 370 ~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 370 LWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHc-CCchHHHHHHHHHHHH
Confidence 7766 4456665555544443
No 51
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-31 Score=242.56 Aligned_cols=377 Identities=18% Similarity=0.152 Sum_probs=285.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH
Q 009099 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 185 (543)
+.+..+...+..+.+.+.+++.+.|.+++|+|++|. +++.++..+...+..++.|.+.||||.|++..+++++..+-.
T Consensus 16 L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~--~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~ 93 (417)
T COG2223 16 LWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQK--GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPC 93 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHH--HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHH
Confidence 334455555666667788889999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh---HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc---
Q 009099 186 FLCATAQS---VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW--- 259 (543)
Q Consensus 186 ~~~~~~~~---~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~--- 259 (543)
+..+++.+ +|++++++++.|++. ..+......++.|||++++|.++|+.. ..++|..+..+++.++... .+
T Consensus 94 ~~~~~a~~~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~-~g~~~ 170 (417)
T COG2223 94 LGLAFAVTYPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA-FGFLA 170 (417)
T ss_pred HHHHHHccCCchHHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH-HhhHH
Confidence 99999854 459999999999994 588899999999999999999999999 8888988777777766644 55
Q ss_pred hHHHHHHhHHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccc
Q 009099 260 WRTMFGLAAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSR 338 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (543)
|+....+..+..++..+..++ +.|.|......++.. ...++.+++++
T Consensus 171 w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~--------------------------------~~~~~~v~~~~ 218 (417)
T COG2223 171 WRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL--------------------------------PAQLKAVFSNK 218 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc--------------------------------hhHHHHHhcCc
Confidence 999998888888776665544 455554211111000 02244566677
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHH
Q 009099 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGM 415 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 415 (543)
+.|.+.+.+...+ +.+..+..+++.++++ ++.+... .......+.+.+.++++|+++||+|.+|.....+..+
T Consensus 219 ~~W~lsllY~~tF----G~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~ 294 (417)
T COG2223 219 DTWLLSLLYFATF----GGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGM 294 (417)
T ss_pred chHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHH
Confidence 7776655544444 4466777777777654 6777665 4566667788899999999999999999999999888
Q ss_pred HHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHH
Q 009099 416 AASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLS 495 (543)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 495 (543)
+++..++......... ..+....+...+......+.+...+. -++...+|+ +.|.+.|+...++.+|++.-|...|.
T Consensus 295 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~l~~~~G~GnGsvf-k~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~ 371 (417)
T COG2223 295 ALAAALLSLFLTGFGH-GGSFVVFVAVFLALFVFAGLGNGSVF-KMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGV 371 (417)
T ss_pred HHHHHHHHcccccccc-CcchHHHHHHHHHHHHHhccCcchhe-eechHHHHh-hhhHHHHHHHHhccccccchhHHHHH
Confidence 8888887765321110 11222233333334444444444444 477788875 58999999999999999999999999
Q ss_pred HHHhhc-cccchhhhhHHHHHHHHhhheeccc
Q 009099 496 VVNKFG-ISTVYLGFATVCLLAVLYIAVNVVE 526 (543)
Q Consensus 496 ~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (543)
..+.+| +...|+++..+.+++.++.+..+.+
T Consensus 372 ~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 372 SLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 7778888888888888766654443
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.9e-30 Score=255.40 Aligned_cols=343 Identities=19% Similarity=0.217 Sum_probs=249.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh
Q 009099 113 AILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ 192 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 192 (543)
.+....+.....+..|.+.+++|.+.++. +++.+++.++..++++++|+++||+|||+++..+.++.+++.+++++++
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 91 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAADLSTPASIV--QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN 91 (385)
T ss_pred HHHHHHHHHHhcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 45556677888899999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 193 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..+++.+++.+.+. .+||+.|++.++..+
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~ 170 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-LSWHAIFAFLSLAGI 170 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988765 789999999888776
Q ss_pred HHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHH
Q 009099 273 LLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFL 351 (543)
Q Consensus 273 ~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 351 (543)
+..+.. ++.||+++.. ++ ++..+ ....++++++++.++...+......
T Consensus 171 ~~~~~~~~~~~~~~~~~---~~-~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (385)
T TIGR00710 171 LLSALIFFILPETLPYE---AR-IQIST---------------------------YFETFLLLLKSKMFWGYALIYGASF 219 (385)
T ss_pred HHHHHHHHhCCCCCCCc---cc-CCHHH---------------------------HHHHHHHHHcCchhHHHHHHHHHHH
Confidence 655444 3456654311 00 00000 0112345566666665444433322
Q ss_pred HHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhh
Q 009099 352 FQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTW 428 (543)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (543)
.. +.....+.|.+++ ..+.++... ......++.+++.++.+++.||+++|+.+..+..+..++.+++......
T Consensus 220 ~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (385)
T TIGR00710 220 GG----FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL 295 (385)
T ss_pred HH----HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 2333444454443 567666543 5556678889999999999999999998888777766666555443211
Q ss_pred cccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 429 KVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
.. ...........+.+.+.+. ..+.......|..| +.++++.++.+...+.++.+.+.+.+.+.+
T Consensus 296 ~~---~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 296 GL---GSWAMIIGPMMFVGIGNSM-ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred cc---chHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 00 0111122222333333332 23344446667776 569999999999988777777777774433
No 53
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=3.3e-30 Score=254.00 Aligned_cols=360 Identities=12% Similarity=0.057 Sum_probs=245.2
Q ss_pred HhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH---H-hhhHHHH
Q 009099 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA---T-AQSVQTM 197 (543)
Q Consensus 122 ~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~-~~~~~~l 197 (543)
...+.++.+.+|+|.+.++. |++.+.+.+++.++++++|+++||+|||+++..+.++++++++++. + .++++.+
T Consensus 31 ~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSPQQS--ASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLI 108 (402)
T ss_pred hHHHhHHHHHHHhCCCHHHh--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHH
Confidence 33445566678999999998 9999999999999999999999999999999999999998876653 3 3588899
Q ss_pred HHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHH-HHHHHhhcccCCCCCchHHHHHHhHHHHHHHHH
Q 009099 198 IIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGI-LAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL 276 (543)
Q Consensus 198 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 276 (543)
++.|+++|++.+...+.....+.+++++++|++++|+...+.++|. ++++.+++.+.+. .||+..+|......++..+
T Consensus 109 ~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~ 187 (402)
T TIGR00897 109 LLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA-FGEMNTLWSALAFVLTGGV 187 (402)
T ss_pred HHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cchHHHHHHHHHHHHHHHH
Confidence 9999999999888777888889999999999999999999999996 6889988887765 6766555544333322222
Q ss_pred -HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHh
Q 009099 277 -GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQL 355 (543)
Q Consensus 277 -~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 355 (543)
..++.++.++.. +++++++.. +.+..++++++++.++...+...+...
T Consensus 188 ~~~~~~~~~~~~~-~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (402)
T TIGR00897 188 IALFSNKDIFTPQ-HMQTREKFS---------------------------ELGKAATILFTNPNVLLGGMVRIINTI--- 236 (402)
T ss_pred HHHhccCCCCCcc-cccCCcchh---------------------------hHHHHHHHHHcChhHHHHHHHHHHHHH---
Confidence 223334322100 000000000 001123456777766654444333222
Q ss_pred hhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHH-HHHHHHHHHHHHHHHHHhhcccc
Q 009099 356 AGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLT-FSFTGMAASMLLLSLSFTWKVLA 432 (543)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 432 (543)
.......|.|.+.++.|.+.... ......++.+++.++.|+++||++||+... .+.....++.+.+...... .
T Consensus 237 -~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~---~ 312 (402)
T TIGR00897 237 -GLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH---F 312 (402)
T ss_pred -HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc---c
Confidence 24455667777778788776644 445567889999999999999999887664 2233333332222221100 0
Q ss_pred cccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHH
Q 009099 433 PYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATV 512 (543)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~ 512 (543)
..+.+...+..++++.+... ..+.. ....|..| ++||++.|+.+...++++.++|.+.|.+.|..|+...+++.+++
T Consensus 313 ~~~~~~~~~~~~~~G~~~~~-~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 313 GHSFAVALIIAIALGIFLAG-YVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred CCcHHHHHHHHHHHHHHHHH-HHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 01122233333444443332 23333 34556655 57999999999999999999999999999999999999988888
Q ss_pred HHHHHHhhhe
Q 009099 513 CLLAVLYIAV 522 (543)
Q Consensus 513 ~~~~~~~~~~ 522 (543)
.+++.++..+
T Consensus 390 ~~i~~~~~~~ 399 (402)
T TIGR00897 390 YVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHH
Confidence 7776665443
No 54
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.5e-30 Score=258.12 Aligned_cols=368 Identities=18% Similarity=0.125 Sum_probs=259.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchh---hHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTV---LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~---~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 186 (543)
+++.+...+......+.+|.+.+++|.+..+. ..|++.+++.++..++++++|+++||+|||+++..+.++.+++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHH
Confidence 45566667777788889999999999986542 248899999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHH
Q 009099 187 LCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (543)
Q Consensus 187 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 266 (543)
+++++++++.+++.|++.|++.+ ..+....++.+++++++|++++++...+..+|..++|.+++.+.+. .+||+.|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~ 177 (408)
T PRK09874 100 LMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS-YGLRPVFFI 177 (408)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHH
Confidence 99999999999999999999865 5677778899999999999999999999999999999999988765 789999999
Q ss_pred hHHHHHHHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 267 AAIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 267 ~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
.+++.++..+.. ++++|+++.. ++++..+.+ +..+.++++..+....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~ 225 (408)
T PRK09874 178 TASVLFLCFLVTLFCIRENFQPV-SKKEMLHMR-------------------------------EVVTSLKNPKLVLSLF 225 (408)
T ss_pred HHHHHHHHHHHHHHHhccCcccc-cchhhhHHH-------------------------------HHHHhCcCCchHHHHH
Confidence 888776655443 3345543210 000000000 0112233443332222
Q ss_pred H-HHHHHHHHhhhhHHHHHHHHHHHHHcCCCch------hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 346 G-AALFLFQQLAGINAVVYYSTSVFRSVGIESD------VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 346 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
. ...... .......+.+.+..+.+.+.. .......+++.+++.+..|++.||++||+.+..+..+..++
T Consensus 226 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 301 (408)
T PRK09874 226 VTTLIIQV----ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLL 301 (408)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHH
Confidence 1 111111 122222333333333222211 11333456777888889999999999999888877766655
Q ss_pred HHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 419 MLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
.+.+... .+.+...+..++.+.+.+. ..+....++.+..|++.+|+.+++.+....+|..++|.+.|.+.+
T Consensus 302 ~~~~~~~--------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~ 372 (408)
T PRK09874 302 LIPMSFV--------QTPLQLGILRFLLGAADGA-LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA 372 (408)
T ss_pred HHHHHHh--------ccHHHHHHHHHHHHhhhHh-hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh
Confidence 5544332 0122233333333433332 334444466777888889999999999999999999999999999
Q ss_pred hhccccchhhhhHHHHHHHHhhheec
Q 009099 499 KFGISTVYLGFATVCLLAVLYIAVNV 524 (543)
Q Consensus 499 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 524 (543)
..|++..|.+.+++.+++.++.++..
T Consensus 373 ~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 373 NYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888777665433
No 55
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.4e-30 Score=252.61 Aligned_cols=359 Identities=15% Similarity=0.096 Sum_probs=251.4
Q ss_pred HHHHHHHHHHHhhhhHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhh-hhHHHHHHHHHHH
Q 009099 112 GAILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL-DAVPLAAGAFLCA 189 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~ 189 (543)
..+..++..+...+.+|. +++++|.+..+. |++.+++.++..+.+++.|+++||+||||.++. +.++..++.++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMI--GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 456666667777787775 678999999888 999999999999999999999999999887654 5666667778889
Q ss_pred HhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhh--hHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHh
Q 009099 190 TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGAL--GSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLA 267 (543)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 267 (543)
++++++.+++.|+++|.+.+...|...+++.|+.++++|++. .++...+.++|..+++.+++.+.+. .+||+.|++.
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~f~~~ 161 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-FGFTVMFLTA 161 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-cccHHHHHHH
Confidence 999999999999999988887888888888999887777654 6788888899999999999988765 7999999999
Q ss_pred HHHHHHHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHH
Q 009099 268 AIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVG 346 (543)
Q Consensus 268 ~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 346 (543)
++..++..+.. +++||.|++..++. ++.+.++.++++.++.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~ 207 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGAPGAL----------------------------------TRLEVRGLLASRDTRLLFVA 207 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCccccc----------------------------------CcchhhhhhcCcchHHHHHH
Confidence 88776655544 44677654210000 00111234445555544433
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHH
Q 009099 347 AALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLS 423 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 423 (543)
..+.... ......+.+.+. ++.+.++... .........+++.++.|++.||+++|+.+..+..+..+....+.
T Consensus 208 ~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~ 283 (375)
T TIGR00899 208 CTLMWGC----NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLA 283 (375)
T ss_pred HHHHHHH----HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 3322221 122223333333 4567665543 33334455677888999999999999988776655444433332
Q ss_pred HHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccc
Q 009099 424 LSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGIS 503 (543)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~ 503 (543)
... +.+.......+.+.+.+. ..+....+..|..|++ +++++++.+...++|..++|.+.|.+.+..|++
T Consensus 284 ~~~--------~~~~~~~~~~~~g~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~ 353 (375)
T TIGR00899 284 ADN--------SLWALLMLQLLNAIFIGI-LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYH 353 (375)
T ss_pred HHH--------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 210 112222222333333332 2344455677888765 679999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHhhh
Q 009099 504 TVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~ 521 (543)
..|.+.+++.+++.++..
T Consensus 354 ~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 354 AVYWFAIVMLIVALFCLL 371 (375)
T ss_pred hHHHHHHHHHHHHHHHHh
Confidence 999888888777766553
No 56
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=5.3e-30 Score=253.12 Aligned_cols=344 Identities=16% Similarity=0.147 Sum_probs=247.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh
Q 009099 113 AILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ 192 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 192 (543)
.....+..+.+.|.+|.+.+++|.++++. +++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAV--SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 44455667788889999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 193 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
+++.+++.|+++|++.+...+...+++.|+++++++++..+.......+|..++|.+++++.+. .+||+.|++.+++.+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-FGWQAIFATLFAITL 171 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHH
Confidence 9999999999999998887777888999999999899999999888999999999999988765 799999999888887
Q ss_pred HHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHH
Q 009099 273 LLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLF 352 (543)
Q Consensus 273 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 352 (543)
+..+..++++|+++. + ++++ ++.+++++++++.++...+.......
T Consensus 172 ~~~~~~~~~~~~~~~---~-~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (401)
T PRK11043 172 LLILPTLRLKPSKKA---R-KQSQ------------------------------DALTFKQLLKSKTYLGNVLIFAACSA 217 (401)
T ss_pred HHHHHHHHcCCCCCc---c-ccch------------------------------HHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 766655555554321 0 0000 01123455566655543333222221
Q ss_pred HHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcc
Q 009099 353 QQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKV 430 (543)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (543)
.+.....+.|.+.++.+.+.... ......++.+++.++.+++.||+++|+.........+++.+.+.......
T Consensus 218 ----~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 292 (401)
T PRK11043 218 ----AFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS- 292 (401)
T ss_pred ----HHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 12334455666667777776544 34445677788999999999999998876665555544443332221110
Q ss_pred cccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcc
Q 009099 431 LAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGI 502 (543)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~ 502 (543)
.......++...+.+.+.+. ..+.......+..| +.+|++.|+.++....++..++.+.|.+.+....
T Consensus 293 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 360 (401)
T PRK11043 293 --HPSLVPLLIPFCVMAAANGA-IYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLL 360 (401)
T ss_pred --cCcHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChh
Confidence 11122222223333333332 33444445556666 5699999999999999999999999998775443
No 57
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.2e-30 Score=264.02 Aligned_cols=386 Identities=22% Similarity=0.203 Sum_probs=279.8
Q ss_pred HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhcccc
Q 009099 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGIS 211 (543)
Q Consensus 132 ~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 211 (543)
+.+..+.... .+..+++++|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|++.|++.++.
T Consensus 111 ~~~c~~~~~~--~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLV--ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHH--HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence 4455555555 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhc
Q 009099 212 SAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQ 291 (543)
Q Consensus 212 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 291 (543)
...+..++.|++++++|+.++.+ ......|..+++.+++++.. +||+.+++..++.++.++..++.||+|+|+..+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 99999999999999999999999 66666677777777777753 799999999999988877766668999999999
Q ss_pred CChHHHHHHHHHHhCch----hhHHHHHH---HHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHH
Q 009099 292 GKKSEAEKSIQTLYGKE----RVSEVMLD---LTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYY 364 (543)
Q Consensus 292 ~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (543)
++.+++.+.+++..+.+ ...+.... .+.......+++..+.++++.+..+...+...+.++.....+..
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~g---- 340 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYG---- 340 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHh----
Confidence 99988888877765432 11111111 11112222334466888998886555544444444321111222
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHH
Q 009099 365 STSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTV 444 (543)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (543)
+.......|.+. .......+.....+....+...|+.|||.....+..+..++++...+..... ..+.......
T Consensus 341 l~~~~~~lg~~~-~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 414 (521)
T KOG0255|consen 341 LSLNVSGLGGNI-YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL-----GGWLHWILPL 414 (521)
T ss_pred hhhhhhhcCchH-HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc-----hhHHHHHHHH
Confidence 222223334332 2233444457777888889999999999999999999998888887753311 1012222223
Q ss_pred HHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheec
Q 009099 445 LYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNV 524 (543)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 524 (543)
+...+.+.+.... +.+..|++|+..|+.+.+.......++++++|.+...... ......+.+++.+..+..++...+.
T Consensus 415 ~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l 492 (521)
T KOG0255|consen 415 LGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLL 492 (521)
T ss_pred HHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcC
Confidence 3333333333333 6689999999999999999999999999999988755443 3333333335666666666666788
Q ss_pred ccCCCCCHHHH
Q 009099 525 VETKGRSLEEI 535 (543)
Q Consensus 525 ~~~~~~~~~~~ 535 (543)
||++.+...+.
T Consensus 493 pet~~~~l~~t 503 (521)
T KOG0255|consen 493 PETKGKPLPGT 503 (521)
T ss_pred cccCCCCCchh
Confidence 99988876544
No 58
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=5.3e-30 Score=252.31 Aligned_cols=352 Identities=19% Similarity=0.197 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH
Q 009099 109 ACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 188 (543)
..+..+..........+.+|.+.+++|.+..+. ++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQL--HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 344445555556666789999999999999888 999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhH
Q 009099 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAA 268 (543)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~ 268 (543)
.++++++.+++.|+++|++.+...+....++.|++++++|++++++.+....+|..++|.+++.+.+. .+||+.|++.+
T Consensus 86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-~g~~~~~~~~~ 164 (392)
T PRK10473 86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-FPWQSLFYTMA 164 (392)
T ss_pred HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cChHHHHHHHH
Confidence 99999999999999999999988899999999999999999999999999999999999998887655 79999999988
Q ss_pred HHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHH
Q 009099 269 IPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGA 347 (543)
Q Consensus 269 ~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 347 (543)
++.++..+. .+++||+++.. ++++... ....++.++++.++...+..
T Consensus 165 ~~~~i~~~~~~~~~~~~~~~~--~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~ 212 (392)
T PRK10473 165 AMGILVLLLSLFILKETRPAR--APAASSK------------------------------PRENSESLLNRFFLSRLVIT 212 (392)
T ss_pred HHHHHHHHHHHHHcCCCCCcc--cCCccch------------------------------HHHHHHHHhCHHHHHHHHHH
Confidence 877665544 34456654310 0000000 00112344455444333322
Q ss_pred HHHHHHHhhhhHHHHHHHHHH-HHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHH
Q 009099 348 ALFLFQQLAGINAVVYYSTSV-FRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSL 424 (543)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 424 (543)
.+.... ......+.+.+ .++.|.+.... .....+++.+++.++.+++.||+++|+.+..+..+..++.+.+.+
T Consensus 213 ~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 288 (392)
T PRK10473 213 TLSVTV----ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLAL 288 (392)
T ss_pred HHHHHH----HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 222211 11222233333 34567766543 455677888999999999999999999988888777777666654
Q ss_pred HHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcccc
Q 009099 425 SFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGIST 504 (543)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~ 504 (543)
... .........+...+++.+... ....+..|.+.++ |.......++..+++.+.+.+.+..|+..
T Consensus 289 ~~~--------~~~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~ 354 (392)
T PRK10473 289 SPS--------HAVSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISA 354 (392)
T ss_pred HHH--------HHHHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 311 112223233333333322221 1233444544332 34444556777788888888888888765
Q ss_pred chhhhhHHH
Q 009099 505 VYLGFATVC 513 (543)
Q Consensus 505 ~~~~~~~~~ 513 (543)
...+.+.+.
T Consensus 355 ~~~~~~~~~ 363 (392)
T PRK10473 355 WNMLIGILI 363 (392)
T ss_pred hHHHHHHHH
Confidence 444444333
No 59
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=3.1e-30 Score=255.35 Aligned_cols=367 Identities=16% Similarity=0.123 Sum_probs=254.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
+..+..+++..+..++......+..|.+++++|+++.+. |++.+.+.+++.+++++.|++.||+|||+++..+.++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~--gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~ 102 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA--GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 334445566677778888888999999999999999988 999999999999999999999999999999999999999
Q ss_pred HHHHHH---HHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC----
Q 009099 183 AGAFLC---ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG---- 255 (543)
Q Consensus 183 i~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---- 255 (543)
++++++ +++++++.++++|+++|+|.|...+..+.++.|+.++++|.+.+++....+.+|..++++++..+..
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~ 182 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVP 182 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999875 4689999999999999999999999999999998877777778999999999999999988764320
Q ss_pred -------------CC--------CchHHHHHHhHHHH-HHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHH
Q 009099 256 -------------NP--------LWWRTMFGLAAIPS-ILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSE 312 (543)
Q Consensus 256 -------------~~--------~~wr~~f~~~~~~~-~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (543)
.. .+||++|+....+. ++..+. ...+||.+.. +++ ++.
T Consensus 183 ~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~---~~~-~~~--------------- 243 (438)
T PRK10133 183 HQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD---NHS-DAK--------------- 243 (438)
T ss_pred ccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc---ccc-ccc---------------
Confidence 00 24666665443333 222222 2223442210 000 000
Q ss_pred HHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HH-HcCCCchhH--HHHHHHHHH
Q 009099 313 VMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSV-FR-SVGIESDVA--ASALVGAAN 388 (543)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~--~~~~~~~~~ 388 (543)
..+...+.+++++++.++...+..++..... .....|.+.+ .+ ..+.++... ......++.
T Consensus 244 -----------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~ 308 (438)
T PRK10133 244 -----------QGSFSASLSRLARIRHWRWAVLAQFCYVGAQ----TACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCF 308 (438)
T ss_pred -----------ccchhhhHHHHHhCchHHHHHHHHHHHHHHH----HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHH
Confidence 0001122356677777665554444433332 2222333433 33 357776644 567778899
Q ss_pred HHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccCh
Q 009099 389 VFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFAS 468 (543)
Q Consensus 389 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 468 (543)
++++++++++.||+++|+.+..+..+..+++++..+. .....+....+.+.+.+. ..|..++...+..|+
T Consensus 309 ~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~glg~~~-i~P~~~s~a~~~~~~ 378 (438)
T PRK10133 309 FIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA---------GGHVGLIALTLCSAFMSI-QYPTIFSLGIKNLGQ 378 (438)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc---------CChHHHHHHHHHHHHHHH-HHHHHHHHHHcccch
Confidence 9999999999999999998888776665555443331 111223334444444443 455666677777775
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc-cccchhhhhHHHHHHH
Q 009099 469 RIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG-ISTVYLGFATVCLLAV 517 (543)
Q Consensus 469 ~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~ 517 (543)
+ .+.+.++.. ...+|+.++|.+.|.+.|..| .+..|++..++.+...
T Consensus 379 ~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 379 D-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred h-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 4 677888776 455788999999999999887 6677765444444333
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=4.7e-30 Score=251.37 Aligned_cols=369 Identities=17% Similarity=0.063 Sum_probs=251.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 189 (543)
+++.++..+.........+.+.++++.+..+. +++.+.+.+++.++++++|+++||+|||++++++.+++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKELHYPDWSQ--PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 44555555544444556667789999988887 9999999999999999999999999999999999999999998888
Q ss_pred HhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHH
Q 009099 190 TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAI 269 (543)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~ 269 (543)
++.+. ++.|+++|++.+...|...+++.|++|+++|++++++......+|.++||.+++++.+. .|+..+.+.+.
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~ 161 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCAL 161 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 87664 78899999999999999999999999999999999999999999999999999998763 48877777766
Q ss_pred HHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHH
Q 009099 270 PSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAAL 349 (543)
Q Consensus 270 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (543)
..++..+..+.+||++.+...+ +.+..+..++. +..++.+++++..+...+...+
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~-----------------------~~~~~~l~~~~~~~~~~~~~~~ 216 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARRPGQ--SWNPIALLRDF-----------------------FHACRVLWRDKLGRFSLAGTTL 216 (393)
T ss_pred HHHHHHHHHhcCCCCccccccc--CCCHHHHHHHH-----------------------HHHHHHHHhCchhHHHHHHHHH
Confidence 5555555556677765321111 10000000000 0112355666665544433332
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHh
Q 009099 350 FLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFT 427 (543)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 427 (543)
..............|.+ +.++.++... .....+++.+++.++.+++.||.++++.+..+. +.++..+.+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~---~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~-- 290 (393)
T PRK11195 217 FWGAGATLRFLVLAWAP---VALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQ-- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHH---HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHH--
Confidence 22221111222222222 2345555433 566777889999999999999998887776664 333332222221
Q ss_pred hcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhh-hhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccch
Q 009099 428 WKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRI-RAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVY 506 (543)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~ 506 (543)
.+.+......++.+.+.+....+. .+...+..|++. +|++.++.+...+++..++..+.+.+ +..|.+..+
T Consensus 291 ------~~~~~~~~~~~~~G~~~g~~~~~~-~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 362 (393)
T PRK11195 291 ------HSLLPAYPLLILIGALGGFFVVPM-NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVA 362 (393)
T ss_pred ------hHHHHHHHHHHHHHHhhhhhhhhH-HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHH
Confidence 012222333334444444333333 345667666554 69999999999999999999888854 788888888
Q ss_pred hhhhHHHHHHHHhhheec
Q 009099 507 LGFATVCLLAVLYIAVNV 524 (543)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~ 524 (543)
.+.+...+++..+.+.++
T Consensus 363 ~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 363 VIVGFGLLVALAMALLWR 380 (393)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777666666655554443
No 61
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=7.8e-30 Score=247.85 Aligned_cols=342 Identities=29% Similarity=0.384 Sum_probs=277.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH
Q 009099 109 ACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 188 (543)
+++..+...++.....+..|.+.+++|.+..+. +++.+.+.++..+++++.|+++||+|||+.+..+.++..++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQA--GLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence 345566777778888889999999999998888 999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhH
Q 009099 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAA 268 (543)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~ 268 (543)
.+.++++.++++|++.|++.+...+....++.|++|+++|++.+++......+|..+++.+++.+.+. .+||+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 160 (352)
T cd06174 82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-LGWRWLFLILA 160 (352)
T ss_pred HHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988765 67999999988
Q ss_pred HHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHH
Q 009099 269 IPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAA 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 348 (543)
+..++..+...+++ +..+...+.
T Consensus 161 ~~~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~-- 183 (352)
T cd06174 161 ILGLLLALLLLFLL-------------------------------------------------------RLLLLLALA-- 183 (352)
T ss_pred HHHHHHHHHHHHHH-------------------------------------------------------HHHHHHHHH--
Confidence 88777665544332 011112222
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHc-CCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChh-HHHHHHHHHHHHHHHHHH
Q 009099 349 LFLFQQLAGINAVVYYSTSVFRSV-GIESDVA--ASALVGAANVFGTAVASSLMDRQGRKN-LLTFSFTGMAASMLLLSL 424 (543)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~ 424 (543)
.+...........+.+.+.++. +.+.... ......++.+++.++.+++.||+++|+ .+..+..+..++.+.+..
T Consensus 184 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 184 --FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred --HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 2222233455566666666654 5555533 666778899999999999999999999 888888888877777665
Q ss_pred HHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcccc
Q 009099 425 SFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGIST 504 (543)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~ 504 (543)
.. +.+...+...+.+.+.+ ...+....+..|..|+++|++.+|+.+...+++..++|.+.|.+.+..+++.
T Consensus 262 ~~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~ 332 (352)
T cd06174 262 AP--------SLALLLVALLLLGFGLG-FAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGG 332 (352)
T ss_pred hc--------cHHHHHHHHHHHHHHHh-ccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcch
Confidence 31 12333333444444433 3456666789999999999999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHHHhhh
Q 009099 505 VYLGFATVCLLAVLYIA 521 (543)
Q Consensus 505 ~~~~~~~~~~~~~~~~~ 521 (543)
.+.+.+++.+++.++.+
T Consensus 333 ~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 333 VFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHhe
Confidence 99999888888776554
No 62
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=6.2e-31 Score=255.64 Aligned_cols=344 Identities=24% Similarity=0.354 Sum_probs=252.1
Q ss_pred HHHHHHHHHHHHHhhhhHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 188 (543)
++..+...+......+.+| .+.+++|.+..+. +++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQI--GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCH--HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 4566777777888888999 8999999999999 999999999999999999999999999999999999999997777
Q ss_pred HHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhH
Q 009099 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAA 268 (543)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~ 268 (543)
.++++++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|++.+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~~~~~~~~~~~ 158 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-FGWRWAFLISA 158 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-CHHCCHHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc-ccccccccccc
Confidence 77788889999999999999999999999999999999999999999999999999999999999855 88999999999
Q ss_pred HHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCccc-chhhhhccchhHHHHHH
Q 009099 269 IPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEA-GWFDLFSSRYWKVVSVG 346 (543)
Q Consensus 269 ~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~ 346 (543)
++.++..++ ..+++++++....+++.++..+ ++++.. .++.+++++..+...+.
T Consensus 159 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEPPPPRERESPKESESK------------------------KPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp HHHHHHHHHHHCCC---STTTT--SSTTTT--------------------------HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred chhhhhhhhHhhhhhhcccccccccccccccc------------------------cccccccccccccccchhhhhhhh
Confidence 998887654 3444443331111111111000 000111 25566666666533333
Q ss_pred HHHHHHHHhhhhHHHHHHHHHH-HHHcCCC-chhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHH
Q 009099 347 AALFLFQQLAGINAVVYYSTSV-FRSVGIE-SDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLL 422 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 422 (543)
.....+. +.....+.+.+ .+..+.+ .... ......+..+++.++.+++.||+++++..........+..+.+
T Consensus 215 ~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 290 (352)
T PF07690_consen 215 FFLFFFV----FSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGL 290 (352)
T ss_dssp HHHHHHH----HHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHH----HHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 3333222 34456666665 4556666 3433 4667778888889999999999999877777666666555555
Q ss_pred HHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHH
Q 009099 423 SLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIG 490 (543)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 490 (543)
...... .+..+......+.+.+.+. ..+....+..+..|++.+|++.|+.+...++++.++|
T Consensus 291 ~~~~~~-----~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 291 LLLPFS-----SSPVWLIIALFLIGFGFGI-VFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CCSHHH-----CHHHHHHHHHHHHHHHHHH-HCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-----hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 432111 1123333344444443332 3556666889999999999999999999999999987
No 63
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.7e-30 Score=253.30 Aligned_cols=363 Identities=19% Similarity=0.196 Sum_probs=265.7
Q ss_pred HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh--hHHHHHHHHHHHhhhcc
Q 009099 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGRVLAGIGIG 209 (543)
Q Consensus 132 ~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g 209 (543)
.+++++.++. +++.+.++.|+.+++++.|++.||+|.|+++..+.++.++++++...+. +++.+++.|++||++.|
T Consensus 66 ~~~~ws~~~k--~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 66 GEYDWSSTEK--GLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG 143 (466)
T ss_pred ceecCCHHHH--HHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence 3677888887 9999999999999999999999999999999999999999999998874 55678999999999999
Q ss_pred ccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc-CCChhHH
Q 009099 210 ISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS-PESPRWL 288 (543)
Q Consensus 210 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~~~~~ 288 (543)
..+|+...+.++|.|++||++..++...+..+|.+++..++|++.+...||+++|++.++.+++..++++++ .|+|..
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~- 222 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK- 222 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc-
Confidence 999999999999999999999999999999999999999999988766899999999999999877766554 666652
Q ss_pred HhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 009099 289 FQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSV 368 (543)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (543)
.+.-.++..+.+++ -+.++..+++.+.+|+++++++..|.++++.+..... +..+..|.|.+
T Consensus 223 -h~~is~~El~~I~~-------------~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~----~~~l~~y~PtY 284 (466)
T KOG2532|consen 223 -HPNISEKELKYIEK-------------GKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWG----FYLLLTYLPTY 284 (466)
T ss_pred -CCCCCHHHHHHHHh-------------cccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHH----HHHHHHHhhHH
Confidence 11111111111110 0001111112578999999999998888776666554 66777778887
Q ss_pred HHH-cC--CCchhHHHHHHHHHHHHHHHHHHHhhhccCCh--------h-HHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 009099 369 FRS-VG--IESDVAASALVGAANVFGTAVASSLMDRQGRK--------N-LLTFSFTGMAASMLLLSLSFTWKVLAPYSG 436 (543)
Q Consensus 369 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (543)
+++ ++ ....+....+..+...+..+++|.++||..+| | .-.++....+++++.+.+. +....
T Consensus 285 ~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~------~~~~~ 358 (466)
T KOG2532|consen 285 LKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT------SDEHR 358 (466)
T ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec------CCCcc
Confidence 775 34 44556688888999999999999999987552 1 2223333333333333332 11112
Q ss_pred hhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH---hhccccchhhhhHHH
Q 009099 437 TLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN---KFGISTVYLGFATVC 513 (543)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~---~~g~~~~~~~~~~~~ 513 (543)
+..++ ++.+..+......+-.+....+. .+++.+..+|+.+.+..+.++++|.+.|.+.. ...|+.+|++.+++.
T Consensus 359 ~~a~~-~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~ 436 (466)
T KOG2532|consen 359 LLAVI-LLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGIL 436 (466)
T ss_pred hHHHH-HHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHH
Confidence 22222 22222222222222222122232 45779999999999999999999999999983 346899999999999
Q ss_pred HHHHHhhhee
Q 009099 514 LLAVLYIAVN 523 (543)
Q Consensus 514 ~~~~~~~~~~ 523 (543)
+++.++..++
T Consensus 437 ~~~~i~f~~f 446 (466)
T KOG2532|consen 437 IVGNIIFLFF 446 (466)
T ss_pred HHhchheeEe
Confidence 9888765554
No 64
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=1.8e-29 Score=247.60 Aligned_cols=356 Identities=13% Similarity=0.088 Sum_probs=256.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH
Q 009099 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 185 (543)
+.+++...+..++..+...+..|.+++++|++..+. |++.+.+.+++.+++++.|++.||+|||++++.++++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~--g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQA--ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 345566777888888888999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHH---hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC------
Q 009099 186 FLCAT---AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN------ 256 (543)
Q Consensus 186 ~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------ 256 (543)
+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.++..+...
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88654 468999999999999999999999999999999999999999999999999999999988766321
Q ss_pred -------------------CCchHHHHHHhHHHHHHHHHHhcc--cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHH
Q 009099 257 -------------------PLWWRTMFGLAAIPSILLALGMGL--SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVML 315 (543)
Q Consensus 257 -------------------~~~wr~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (543)
..+||++|++.+++.++..+...+ .||.++ + +.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~----~-~~~~------------------- 218 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH----S-DAKQ------------------- 218 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----c-cccc-------------------
Confidence 135999999998877665544433 233211 0 0000
Q ss_pred HHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc--CCCchhH--HHHHHHHHHHHH
Q 009099 316 DLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSV--GIESDVA--ASALVGAANVFG 391 (543)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~ 391 (543)
.+...+.++++|++.++...+..+++...+ .....|.+.+.++. +.+.... .......+..+|
T Consensus 219 ---------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e----~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vG 285 (410)
T TIGR00885 219 ---------ISFSASLSRLARIRHYREGVIAQFFYVGVQ----IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFIS 285 (410)
T ss_pred ---------ccchhhHHHHHhChhHHHHHHHHHHHHHHH----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 001112345666777666555555544443 33345555555543 2222211 344445677899
Q ss_pred HHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhh
Q 009099 392 TAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIR 471 (543)
Q Consensus 392 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 471 (543)
+++++++.||+++|+.+.++..+.++.+++.... ..........+.+++.+ ...|..++...+..+++.+
T Consensus 286 R~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~---------~~~~~~~~l~~~glf~s-~~fp~i~sl~~~~~g~~~~ 355 (410)
T TIGR00885 286 RFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA---------GGHVGLYCLTLCSAFMS-LMFPTIYGIALKGLGQDTK 355 (410)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc---------CChHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhh
Confidence 9999999999999998888777766666665542 11223344444444443 3447777788888887755
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHhh------ccccchhhhhHH
Q 009099 472 AKAVALSLGMHWISNFVIGLYFLSVVNKF------GISTVYLGFATV 512 (543)
Q Consensus 472 ~~~~g~~~~~~~~g~~~~~~~~g~~~~~~------g~~~~~~~~~~~ 512 (543)
..+.++...+ +|+++.|++.|.+.|.. +++..|++-..+
T Consensus 356 ~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 356 YGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred hhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 4455544443 99999999999999964 355666653333
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=1.9e-29 Score=249.12 Aligned_cols=360 Identities=18% Similarity=0.188 Sum_probs=240.8
Q ss_pred HHHHHHHHHhhhhHHHHHHHcCC--CcchhhHHHHHHH--HH---HHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH
Q 009099 114 ILFGYHLGVVNGALEYLAKDLGI--AENTVLQGWIVSS--LL---AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~g~~~s~--~~---l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 186 (543)
+.+.++...+++..+.+.+++.. ++++. +.+.+. +. ++..+++++.|+++||+|||++++.+.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~ 80 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLV--ALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTL 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHH--HHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 45677788888888888888653 34444 444433 33 33447899999999999999999999999999999
Q ss_pred HHHHhhhHH--------HHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC---
Q 009099 187 LCATAQSVQ--------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG--- 255 (543)
Q Consensus 187 ~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~--- 255 (543)
+++++++++ .++++|+++|++.+...+....++.|++++++|+++.++...+..+|.+++++++..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 81 LIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred HHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999998875 488999999999999999999999999999999999999999999999999887655421
Q ss_pred ----CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccch
Q 009099 256 ----NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGW 331 (543)
Q Consensus 256 ----~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (543)
...+||+.|++.+++.++..+.....+|++++..++++ +++.+.++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~ 210 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK------------------------------HKKKRGPI 210 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc------------------------------cccccCCH
Confidence 23689999988877766655554455666542111100 01122334
Q ss_pred hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHH
Q 009099 332 FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLL 408 (543)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 408 (543)
++.++++.... ....... +.....+.....+.+.+. +..+.+.... ......++.+++.++.|++.||++||+.+
T Consensus 211 ~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 288 (394)
T TIGR00883 211 RETLTKHRKPF-LLGLGLV-IATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL 288 (394)
T ss_pred HHHHHhchHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 45555544111 1111111 122222444555666665 4466655533 45566788889999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHH-HHHHHHHH
Q 009099 409 TFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSL-GMHWISNF 487 (543)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~ 487 (543)
.....+..+..+.+..... ...+.+......++.+.+.+. ..+....++.|.+|++.|+++.++.+ ....+|..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ 363 (394)
T TIGR00883 289 IIFTVLAALLAVPLLMALL----DSGSFTLFFFLVLGLALIGGM-YTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGG 363 (394)
T ss_pred HHHHHHHHHHHHHHHHHHh----cCCchHHHHHHHHHHHHHHHH-HhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhh
Confidence 6554444333221111110 001122223333333333332 34455668899999999999999854 44567888
Q ss_pred HHHHhhHHHHHhhc-cccchhhhhHH
Q 009099 488 VIGLYFLSVVNKFG-ISTVYLGFATV 512 (543)
Q Consensus 488 ~~~~~~g~~~~~~g-~~~~~~~~~~~ 512 (543)
++|.+.|.+.|+.| +...++...++
T Consensus 364 ~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 364 FAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 99999999999988 55555444433
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=3.9e-29 Score=245.48 Aligned_cols=354 Identities=14% Similarity=0.065 Sum_probs=244.9
Q ss_pred HHHHHHHHhhhhH-HHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhh
Q 009099 115 LFGYHLGVVNGAL-EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS 193 (543)
Q Consensus 115 ~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 193 (543)
+.........+.+ +++++++|++..+. |++.+.+.+...+.+++.|+++||+|||++++.+.++.+++.++++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~--gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 98 (400)
T PRK11646 21 LVVLGFFVVFPLISIRFVDQLGWAAVMV--GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHE 98 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3333334434444 45788999999988 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHH
Q 009099 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (543)
Q Consensus 194 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 273 (543)
++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++++. . .+||+.|++.++..++
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~-~g~~~~f~~~~~~~~~ 176 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q-YDFRLVCATGAVLFVL 176 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hhHHHHHHHHHHHHHH
Confidence 9999999999999998888888999999999999999999999999999999999999987 4 7999999998877665
Q ss_pred HHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHH
Q 009099 274 LALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLF 352 (543)
Q Consensus 274 ~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 352 (543)
..+. .++.||.+. ++..++ .+.+++++++++.++...+.......
T Consensus 177 ~~i~~~~~~~~~~~----~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
T PRK11646 177 AAAFNAWLLPAYKL----STVRTP------------------------------VREGMTRVLRDKRFVTYVLTLTGYYM 222 (400)
T ss_pred HHHHHHHhCCcccc----cccchh------------------------------hHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 5433 333454211 000000 01123455666655543333222221
Q ss_pred HHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhh-ccCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 009099 353 QQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMD-RQGRKNLLTFSFTGMAASMLLLSLSFTWK 429 (543)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (543)
. ......+.|.+.++.+.++... ......+..+.+....+++.| |++.++.+..+..+.+++.+++....
T Consensus 223 ~----~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--- 295 (400)
T PRK11646 223 L----AVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--- 295 (400)
T ss_pred H----HHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---
Confidence 1 2223345666666654444332 334444444444444455554 56666666666666666655554321
Q ss_pred ccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc----cccc
Q 009099 430 VLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG----ISTV 505 (543)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g----~~~~ 505 (543)
+.+...+...+++.+.. ...+...+++.+..|++.+|+++|+.+...++|..++|.+.|.+.|..+ ....
T Consensus 296 -----~~~~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~ 369 (400)
T PRK11646 296 -----NLQQLFTLICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELP 369 (400)
T ss_pred -----hHHHHHHHHHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchH
Confidence 11222222333333333 2334555678899999999999999999999999999999999998753 3445
Q ss_pred hhhhhHHHHHHHHh
Q 009099 506 YLGFATVCLLAVLY 519 (543)
Q Consensus 506 ~~~~~~~~~~~~~~ 519 (543)
+...+++.+++.+.
T Consensus 370 ~~~~~~~~~~~~~~ 383 (400)
T PRK11646 370 WMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555555444
No 67
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=7.5e-29 Score=248.95 Aligned_cols=372 Identities=19% Similarity=0.143 Sum_probs=256.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-----cccch-hhhhhHHHHHH
Q 009099 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-----GRTRT-FQLDAVPLAAG 184 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-~~~~~~~~~i~ 184 (543)
+..+..+......++.+|...++.|.+.+++ |.+ +.....+ ++.+++|+++||+ |||+. ++.+.+..+++
T Consensus 19 ~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~i--g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~ 94 (491)
T PRK11010 19 ILGFASGLPLALTSGTLQAWMTVENIDLKTI--GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVA 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHH
Confidence 3345555666677889999999999998888 776 4444444 6889999999999 99885 66777777777
Q ss_pred HHHHHHh---hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchH
Q 009099 185 AFLCATA---QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (543)
Q Consensus 185 ~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 261 (543)
..++++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+...|||
T Consensus 95 ~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr 174 (491)
T PRK11010 95 IAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQ 174 (491)
T ss_pred HHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHH
Confidence 7777775 4788899999999999998899999999999999999999999999999999999999888876336999
Q ss_pred HHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 262 TMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 262 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
..|++.+++.++..+..++.||+++.. +++++. .+ ....+++++++++..+
T Consensus 175 ~~f~i~a~l~ll~~l~~~~~~e~~~~~--~~~~~~-~~--------------------------~~~~~l~~~~~~~~~~ 225 (491)
T PRK11010 175 GMYWLMAALLIPCIIATLLAPEPTDTI--PVPKTL-EQ--------------------------AVVAPLRDFFGRNNAW 225 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccc--ccccch-hh--------------------------hHHHHHHHHHcCcCHH
Confidence 999999988777666555667764311 000000 00 0011244556555555
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HH-HHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--AS-ALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
...+...+..... ........+++.+..|++.... .. ....++.+++.+++|+++||+++|+.+..+.++.++.
T Consensus 226 ~~ll~~~l~~~~~---~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 226 LILLLIVLYKLGD---AFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4443333332221 1222233344445578777755 22 2334688899999999999999988777666555554
Q ss_pred HHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 419 MLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
.+.+...... ..+........++.....+.+. +...++..+..+++.+++..|+.+...++|..+++.+.|.+.|
T Consensus 303 ~l~~~~l~~~----~~~~~~l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~ 377 (491)
T PRK11010 303 NAGYWLLSIT----DKNLYSMGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE 377 (491)
T ss_pred HHHHHHHHhc----cccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333221110 0111111212222111122222 2234567788888889999999999999999999999999999
Q ss_pred hhccccchhhhhHHHHHHHHhhhee
Q 009099 499 KFGISTVYLGFATVCLLAVLYIAVN 523 (543)
Q Consensus 499 ~~g~~~~~~~~~~~~~~~~~~~~~~ 523 (543)
..||+..|.+.+++++++.++....
T Consensus 378 ~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 378 AHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998988888888876665544
No 68
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=4e-29 Score=244.98 Aligned_cols=363 Identities=15% Similarity=0.119 Sum_probs=255.1
Q ss_pred HHHHHHHHHHHhhhhH-HHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH
Q 009099 112 GAILFGYHLGVVNGAL-EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT 190 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 190 (543)
..+..........+.+ +++.+++|++..+. |++.+++.+++.+++++.|+++||+|||++++++.++.+++.++.++
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQYSLSVDLI--GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 3444445555555554 46778899999999 99999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHH
Q 009099 191 AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP 270 (543)
Q Consensus 191 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~ 270 (543)
+++++.++++|++.|.+.+...+...++..|.+++++|++++++.....++|..++|.+++++.. .+|+..|++.++.
T Consensus 93 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f~~~~~~ 170 (395)
T PRK10054 93 VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAAIC 170 (395)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHHHHHHHH
Confidence 99999999999999988887788889999999999999999999999999999999999998863 6899999988877
Q ss_pred HHHHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHH
Q 009099 271 SILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAAL 349 (543)
Q Consensus 271 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (543)
.++..+.. +++||+++. ++++++ + ..+.++.++++.++...+...+
T Consensus 171 ~~i~~i~~~~~~~~~~~~---~~~~~~--~----------------------------~~~~~~~~~~~~~~~~~~~~~l 217 (395)
T PRK10054 171 SAFPLVFIQIWVQRSEKA---IATETG--S----------------------------VWSPSVLLQDKALLWFTCSGFL 217 (395)
T ss_pred HHHHHHHHHHHHhccccc---cccchh--h----------------------------hhhhhhhccCceehHHHHHHHH
Confidence 76654433 334544321 000000 0 0011345667766655544444
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHh
Q 009099 350 FLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFT 427 (543)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 427 (543)
..+...........|.+.. .+.+.+.... ......+..+......+++.||.++|+.+..+..+..++...+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 295 (395)
T PRK10054 218 ASFVSGAFASCISQYVMVV-ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG- 295 (395)
T ss_pred HHHHHHHhhhhHHHHHHHh-cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc-
Confidence 3333222222333333332 2233333322 33334444555667888999999999988888777777666554320
Q ss_pred hcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchh
Q 009099 428 WKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYL 507 (543)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~ 507 (543)
.+.+...+...+++.+.. ...|....++.+..|++.++++.+..+ ...+|..+||.+.|.+.|+.|+...|.
T Consensus 296 ------~~~~~~~~~~~~~~~g~~-~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~ 367 (395)
T PRK10054 296 ------NSLLLWGMSAAVFTVGEI-IYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFV 367 (395)
T ss_pred ------hHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHH
Confidence 012223333444444432 224455567888889999999998765 677899999999999999999888887
Q ss_pred hhhHHHHHHHHhhh
Q 009099 508 GFATVCLLAVLYIA 521 (543)
Q Consensus 508 ~~~~~~~~~~~~~~ 521 (543)
+.+++..+..++..
T Consensus 368 ~~~~~~~~~~~~~~ 381 (395)
T PRK10054 368 ILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666665555444
No 69
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8e-30 Score=248.90 Aligned_cols=378 Identities=16% Similarity=0.156 Sum_probs=251.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVV-NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 181 (543)
+.++..++...+....+...+ .+.+..+.+|.+...++. +++.++|+++|+++++++|.+.||++..+.+....+++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l--~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQL--GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhh--hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHH
Confidence 344444444444444444322 223334558899988898 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC-----C
Q 009099 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG-----N 256 (543)
Q Consensus 182 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-----~ 256 (543)
++..++....+|++.+++.|++.|+.+++.+|....+++.|+.++||++.++++.+..++|.++|.+++..+.. .
T Consensus 122 ~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 122 GLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 99998888899999999999999999999999999999999999999999999999999999999999877421 2
Q ss_pred CCchHHHHHHhHHHHHHHHHH-hcccCCChhH--HHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhh
Q 009099 257 PLWWRTMFGLAAIPSILLALG-MGLSPESPRW--LFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFD 333 (543)
Q Consensus 257 ~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (543)
..||||.|++.++++++..++ ++++|++|.. ...++++.-..+..++ .......++.++..+++
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 268 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRE-------------SPSGGIENKFKWKGFKE 268 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHh-------------ccCCCcccccCHHHHHH
Confidence 378999999999999887655 4556998872 2111111111111100 00001111135566778
Q ss_pred hhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhhhcc----CChh
Q 009099 334 LFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLMDRQ----GRKN 406 (543)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~----g~~~ 406 (543)
.++++..|...+..++.... .+.+.+|+|.++++ .+++.... +.....++++++.+++|+++||+ .+|.
T Consensus 269 a~~dp~vw~~~l~~~~~~lv----~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~ 344 (495)
T KOG2533|consen 269 ALKDPGVWPFSLCYFFLKLV----NYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRL 344 (495)
T ss_pred HHhchhHHHHHHHHHHHhhc----cccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 88888888877766666554 55667777777777 34655544 67778899999999999999994 4444
Q ss_pred HHHHHHHHHH-HHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCccccccccccccc-ChhhhhHHHHHHHHHHHH
Q 009099 407 LLTFSFTGMA-ASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIF-ASRIRAKAVALSLGMHWI 484 (543)
Q Consensus 407 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~ 484 (543)
.......+.. ++...+... .........++.+........++.....++.. +...+-+..++.....+.
T Consensus 345 ~~~~~~~~~~~~g~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s 415 (495)
T KOG2533|consen 345 LFIVFLCLYAIIGAISLLAA---------AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGS 415 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhh---------ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhH
Confidence 4443333333 222333221 11111111111111111112233333444444 444455556666666666
Q ss_pred HHHHHHHhhHHHH-Hhhccccchhh
Q 009099 485 SNFVIGLYFLSVV-NKFGISTVYLG 508 (543)
Q Consensus 485 g~~~~~~~~g~~~-~~~g~~~~~~~ 508 (543)
++.++|.+.-... .++++...|..
T Consensus 416 ~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 416 AGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred HHHhhhhhcccccCcchhhhhHHHH
Confidence 6666666554433 23566666633
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=1.4e-28 Score=238.83 Aligned_cols=331 Identities=18% Similarity=0.187 Sum_probs=237.6
Q ss_pred HHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHH
Q 009099 119 HLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMI 198 (543)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~ 198 (543)
......+.+|.+.+++|.+.++. +++.+++.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.++
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVA--GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLF 91 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHH
Confidence 34566889999999999999999 999999999999999999999999999999999999988888877 789999999
Q ss_pred HHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCC-chHHHHHHhHHHHHHHHHH
Q 009099 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL-WWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 199 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~ 277 (543)
+.|++.|++.+...+....++.|+++ ++|++++++...+.++|..+++.+++.+.+... +||+.|.+.++..++..+
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~- 169 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL- 169 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH-
Confidence 99999999999888888888999986 579999999999999999999988887765422 499999877665443322
Q ss_pred hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhh
Q 009099 278 MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAG 357 (543)
Q Consensus 278 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (543)
.++|+.++ ++++ +++.++...++++|++..+...+...+... .
T Consensus 170 -~~~~~~~~----~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 212 (355)
T TIGR00896 170 -AWIPQVRR----RVAA----------------------------NQTTTRLTPVRIWRSPLAWQVTVFFGLQSG----L 212 (355)
T ss_pred -HHhhhhcc----ccCC----------------------------CCCCCCCCCchhhcCHhHHHHHHHHHHHHH----H
Confidence 22333221 0000 000011234556677666554433332222 2
Q ss_pred hHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccC-ChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQG-RKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
+.....+.|.++++.+.+.... ......++.++++++.|++.||++ ||+.+..+..+.+++.+.+.+...
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 285 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM------- 285 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh-------
Confidence 4455566777777777766543 666678899999999999999994 565666666666666655543211
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccc-cccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLP-EIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG 501 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g 501 (543)
.... ....+++.+.+. ..+.....+. +..+++.++...++.+...+++..++|.+.|.+.|+.|
T Consensus 286 -~~~~-~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 286 -HGLW-AWALVLGLGQGG-AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred -hHHH-HHHHHHHHhhhh-HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111 123334443332 2333333343 34456678999999999999999999999999999887
No 71
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.6e-28 Score=240.80 Aligned_cols=333 Identities=20% Similarity=0.229 Sum_probs=231.3
Q ss_pred HHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHH
Q 009099 118 YHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTM 197 (543)
Q Consensus 118 ~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l 197 (543)
+...++.|.+|.+.+++|++.++. +++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSV--QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 345567789999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 198 IIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 198 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
++.|+++|++.+...+...+++.|++++++|++++++...+..+|..++|.+++.+.+. .+||+.|++.+++.++..+.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-FSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHH
Confidence 99999999999998899999999999999999999999999999999999999888765 78999999888877665443
Q ss_pred -hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhh
Q 009099 278 -MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLA 356 (543)
Q Consensus 278 -~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 356 (543)
.+++||+++.. ++++.+.++ ...+++++++++..+...+...+...
T Consensus 162 ~~~~~~~~~~~~--~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---- 208 (377)
T PRK11102 162 VFFFIPETLPKE--RRQPFHLRT---------------------------TIRNFASLFRHKRVLGYMLASGFSFA---- 208 (377)
T ss_pred HHHhCCccCccc--ccCCCChHH---------------------------HHHHHHHHHcChHHHHHHHHHHHHHH----
Confidence 44556654310 000000000 01123345566555443333222221
Q ss_pred hhHHHHHHHHH-HHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 357 GINAVVYYSTS-VFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 357 ~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
.......+.+. +.+..+.++... ......++.+++.++.+++.||+|+|+.+..+..+..+..+.+...... +
T Consensus 209 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~----~ 284 (377)
T PRK11102 209 GMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL----D 284 (377)
T ss_pred HHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH----h
Confidence 12222333333 334467665543 5566778888999999999999999998888776544433332221110 0
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHH-HHHHHHHHh
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHW-ISNFVIGLY 492 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~ 492 (543)
...+...+...++..+... .......+..|..| +.++++.++.+.... ++..+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 285 LGFWALVVGVAAFVGCVSM-ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred hhHHHHHHHHHHHHHHHHH-hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 0112222222233322222 22223335667766 679999999877654 445555544
No 72
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=5.7e-28 Score=236.39 Aligned_cols=358 Identities=13% Similarity=0.078 Sum_probs=257.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchh----hhhhHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTF----QLDAVPLAAGA 185 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~----~~~~~~~~i~~ 185 (543)
.+..+...+..+...|.+|.+.+++|.+..++ |++.+++.+...++++++|+++||+|||+.. ..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~i--g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~-- 85 (382)
T TIGR00902 10 ALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMI--GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA-- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--
Confidence 45566666777888899999999999999999 9999999999999999999999999985433 222222222
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHH
Q 009099 186 FLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFG 265 (543)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 265 (543)
..+.++++++.+++.|+++|.+.+...|...++..++ .++|++++|....+.++|.+++|.+++.+.+. .|||..|+
T Consensus 86 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~-~g~~~~f~ 162 (382)
T TIGR00902 86 AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM-FDEQNILA 162 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH-cChhHHHH
Confidence 2445678999999999999999888888888887664 46789999999999999999999999998876 79999998
Q ss_pred HhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 266 LAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 266 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
+.++..++..+.. .++|+++. +++.++ ++.++..++++++|++.++...+
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~---~~~~~~--------------------------~~~~~~~~~~~~l~~~~~~~~l~ 212 (382)
T TIGR00902 163 ILTAGLAFMLIGF-LIKPTIPP---KDAIPE--------------------------DESQGDSAFIALLKNPMNLRFLA 212 (382)
T ss_pred HHHHHHHHHHHHH-HcCCCCCC---Cccccc--------------------------cccccchhHHHHHcChHHHHHHH
Confidence 8766533333333 33333210 000000 00011223567788888777666
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLS 423 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 423 (543)
...+.... ......+.+.+.++.|.+.... ......++.+++.++.+++.||+++|+.+.++.+...+....+.
T Consensus 213 ~~~l~~~~----~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~ 288 (382)
T TIGR00902 213 AVCLIQGA----HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG 288 (382)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 55554433 3334445566667788876644 45556778888899999999999999999998888888877766
Q ss_pred HHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHH-HHHHHHHHHHHhhHHHHHhhcc
Q 009099 424 LSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLG-MHWISNFVIGLYFLSVVNKFGI 502 (543)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~~~~~~~~g~~~~~~g~ 502 (543)
+.. +.+..+....+.+..++.... ....++++. |++.++++.++++. ...+|..++|.+.|.+.|+.|+
T Consensus 289 ~~~--------~~~~~~~~q~l~g~~~~~~~~-~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~ 358 (382)
T TIGR00902 289 AIE--------AFPLIFLLQILHCGTFAVCHL-AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA 358 (382)
T ss_pred hHh--------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 531 223344445555555554333 344477777 88899999999874 5678999999999999999985
Q ss_pred ccchhhhhHHHHHHHHh
Q 009099 503 STVYLGFATVCLLAVLY 519 (543)
Q Consensus 503 ~~~~~~~~~~~~~~~~~ 519 (543)
..|.+.+++.+++.++
T Consensus 359 -~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 359 -GTFVFMAIIAAAAFFL 374 (382)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 6677777777665443
No 73
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=7.5e-28 Score=237.20 Aligned_cols=342 Identities=18% Similarity=0.158 Sum_probs=236.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH
Q 009099 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT 190 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 190 (543)
+..+...+......+.+|.+.+++|.++.+. +++.+++.+++.++++++|+++||+|||+++..+.++..++.+++.+
T Consensus 15 ~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 92 (394)
T PRK11652 15 LLVAVGQMAQTIYVPAIADMARDLNVREGAV--QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF 92 (394)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 3334555666777889999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHH
Q 009099 191 AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP 270 (543)
Q Consensus 191 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~ 270 (543)
+++++.+++.|++.|++.+...+....+..|+++++++++++++...+..+|..++|.+++.+.+. .+||+.|++.++.
T Consensus 93 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~f~~~~~~ 171 (394)
T PRK11652 93 AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-FGWRACYLFLLLL 171 (394)
T ss_pred HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHH
Confidence 999999999999999999888788888899999999999999999999999999999999988765 7899999998877
Q ss_pred HHHHHH-HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHH
Q 009099 271 SILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAAL 349 (543)
Q Consensus 271 ~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (543)
.++..+ ..++.||+++. ++++.+ .+..++++++++.++...+....
T Consensus 172 ~~~~~~~~~~~~~~~~~~---~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 218 (394)
T PRK11652 172 GAGVTFSMARWMPETRPA---DARRTR------------------------------VLASYRTLLSNRRFNCYLLMLIG 218 (394)
T ss_pred HHHHHHHHHHhCCccCcc---ccchhH------------------------------HHHHHHHHHcChHHHHHHHHHHH
Confidence 665443 34456775431 000000 01123345556655544433222
Q ss_pred HHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHH
Q 009099 350 FLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSF 426 (543)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 426 (543)
... .......+.+.++++ .+.+.... ......++.+++.++.+++.||.+++... ......++.+.+....
T Consensus 219 ~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~ 292 (394)
T PRK11652 219 TLA----GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPG 292 (394)
T ss_pred HHH----HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 221 122223333334444 66665543 34445667777888888888888733222 2222222222221111
Q ss_pred hhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 427 TWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
.. .....+.......+.+.+.+. ..+....+..|..| +.+|++.++.+....+|+.+++.+.+.+.+.
T Consensus 293 ~~---~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 293 WF---GVMNVWTLLVPAALFFFGAGM-LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred Hh---ccccHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 00 001122233333444444443 34455556778777 5689999999999999999999998877554
No 74
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.2e-29 Score=248.71 Aligned_cols=405 Identities=15% Similarity=0.159 Sum_probs=284.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
+-|.+++..++......-....++...+.++++|+.+.+++ +|+.++....+.+..|+.+.+.||+|.|.+.+.|.++
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~--~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQI--AWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHH--HHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 34555555555544444444555678999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHH-HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc
Q 009099 181 LAAGAFLCATAQSVQTMIIGR-VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW 259 (543)
Q Consensus 181 ~~i~~~~~~~~~~~~~l~~~r-~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 259 (543)
.+++.++.+|++++|++++.. ++.|+|.|..+.....++..||+++ |+.+.|+...+.++|.++-|.+...+.+. .|
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~-~G 198 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSK-YG 198 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHH-hC
Confidence 999999999999999999988 9999999999999999999998765 99999999999999988888888787766 89
Q ss_pred hHHHHHHhHHHHHHHHHHhccc-CCChhHHHh--cCChH--HHHHHH-----HHHh--CchhhH---HHHHHHHHhccCC
Q 009099 260 WRTMFGLAAIPSILLALGMGLS-PESPRWLFQ--QGKKS--EAEKSI-----QTLY--GKERVS---EVMLDLTNAGQGS 324 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~--~~~~~--~~~~~~-----~~~~--~~~~~~---~~~~~~~~~~~~~ 324 (543)
||+.+++.+.+.+-.++....+ |..++.... ++... ...+.. .+.. .....+ ......+....+.
T Consensus 199 ~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (509)
T KOG2504|consen 199 WRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKW 278 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccc
Confidence 9999999998887666555444 423221000 00000 000000 0000 000000 0000011111111
Q ss_pred ---CCcccch---hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHH
Q 009099 325 ---AEPEAGW---FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVAS 396 (543)
Q Consensus 325 ---~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g 396 (543)
..+.... .++++++.++.+.+...+..+ ++.....+++.+.++.+++.... .....++..++++++.|
T Consensus 279 ~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~----g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G 354 (509)
T KOG2504|consen 279 RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYL----GFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILG 354 (509)
T ss_pred cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHH----HHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhh
Confidence 1111222 577888777666665555544 36777778888888888887755 66778899999999999
Q ss_pred HhhhccCChhHH--HHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHH
Q 009099 397 SLMDRQGRKNLL--TFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKA 474 (543)
Q Consensus 397 ~l~d~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 474 (543)
+++|+...++.. .++.+...++.+.+.+. .+.........+++...+ ....+...++.|+.+.++-..+
T Consensus 355 ~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~--------~~~~~l~~~~~~fG~~~g-~~~~l~~~i~~~~~g~~~l~~a 425 (509)
T KOG2504|consen 355 LLADKPGIRALVLFLLTLLIAGLARLFLPFA--------TTYVGLIVFSILFGFCVG-SFSSLTPVILVDLVGLEKLSNA 425 (509)
T ss_pred hhcCccccchHHHHHHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcChhhcchH
Confidence 999998844433 34444444444333332 112233333333333333 2344444578899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhc-cccchhhhhHHHHHHHHhhhe
Q 009099 475 VALSLGMHWISNFVIGLYFLSVVNKFG-ISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 475 ~g~~~~~~~~g~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 522 (543)
.|+...+..++..+||++.|.+.|..| |...|...+++.+++.++.++
T Consensus 426 ~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 426 YGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred HHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHH
Confidence 999999999999999999999999988 888898888888887765443
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=8.8e-28 Score=236.77 Aligned_cols=373 Identities=16% Similarity=0.116 Sum_probs=247.8
Q ss_pred HHHHHHHHHHHHHh-hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcc-cchhhhhhHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVV-NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR-TRTFQLDAVPLAAGAFL 187 (543)
Q Consensus 110 ~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~ 187 (543)
++..+......++. +++.+++.+++|++..++ |++.+++.++..++++++|.++||+|| |+++.++.++.+++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~i--Gl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEI--GWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 34444555555554 556678888899999999 999999999999999999999999965 77888888888888888
Q ss_pred HHHhhhHHHHHHHHHHHhhhccccccchhhhhh--------ccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc
Q 009099 188 CATAQSVQTMIIGRVLAGIGIGISSAIVPLYIS--------EISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW 259 (543)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 259 (543)
+.+.++++.+++.|++.|++.+...+...++.. |......|.+.+| .+|.++++++++.+... ..
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~-~~ 158 (418)
T TIGR00889 86 AAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE-LS 158 (418)
T ss_pred HHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc-ch
Confidence 899999999999999999987766665555432 2222233445554 36777778887766322 34
Q ss_pred hHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccch
Q 009099 260 WRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRY 339 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (543)
|+. |++.++..++..+..+++||+|+.. ++++.+..+ ....+.++++|++.
T Consensus 159 ~~~-f~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~--------------------------~~~~~~~~~~k~~~ 209 (418)
T TIGR00889 159 NIQ-LYITAGSSALLGVFALTLPDIPVAK--STAKMSIKV--------------------------MLGLDAFILFKNKR 209 (418)
T ss_pred hHH-HHHHHHHHHHHHHHHhcCCCCCCCc--cccccCHHH--------------------------HhhhhHHHHhcCCC
Confidence 654 5555655555555566678875310 100000000 00112334666666
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCc----------hhHHHHHHHHHHHHHHHHHHHhhhccCChhHHH
Q 009099 340 WKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIES----------DVAASALVGAANVFGTAVASSLMDRQGRKNLLT 409 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 409 (543)
++...+..++.... ......+.+.+.++.+.++ .........+..+++.+..|++.||+|+|+.+.
T Consensus 210 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~ 285 (418)
T TIGR00889 210 MAIFFFFSMLLGAP----LQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVML 285 (418)
T ss_pred eeeHHHHHHHHHhH----HHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 65554444433222 2223344455555555332 233556667788889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHH-HHHHHHHHH
Q 009099 410 FSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSL-GMHWISNFV 488 (543)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~ 488 (543)
.+.++..++..++..... .....+...+..++.+.+.+. ..+....++.|.+|++.|+++.|+.+ ....+|.++
T Consensus 286 ~~~~~~~v~~~l~~~~~~----~~~~~~~l~l~~~l~g~~~~~-~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 286 LSLVAWALRFGFFAYGDP----EYFGYALLFLSMIVYGCAFDF-FNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHHHHHHHHHHHHHcCc----chhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 988877777655544200 000112222333444444332 23444557899999999999999997 567899999
Q ss_pred HHHhhHHHHHhh------ccccchhhhhHHHHHHHHhhheecccCCC
Q 009099 489 IGLYFLSVVNKF------GISTVYLGFATVCLLAVLYIAVNVVETKG 529 (543)
Q Consensus 489 ~~~~~g~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (543)
+|.+.|.+.|+. ||+..|.+.+++.+++.++.+++.+++++
T Consensus 361 Gp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 361 GYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999984 47788888888888887777777776654
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=2.3e-27 Score=233.06 Aligned_cols=355 Identities=12% Similarity=0.088 Sum_probs=228.8
Q ss_pred HHHHHHHHHHhhhhHHH-HHHHcCCCcchhhHHHHHHHHHH-HHHHHHHhhHhhhhhhcccchh-hhhhHHHHHHHHHHH
Q 009099 113 AILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLA-GATVGSFTGGSLADKFGRTRTF-QLDAVPLAAGAFLCA 189 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~-~~~~~~~~i~~~~~~ 189 (543)
.+..+.......|.+|. +.+++|.+.++. |++.+.+.+ ++.++++++++ +||+||||.+ +.+.++.+++..+.+
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~ 100 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMV--GFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFA 100 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHH
Confidence 45555555555665554 688999999998 999876655 66666655566 9999999875 556666677888888
Q ss_pred HhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccc--hhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHh
Q 009099 190 TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIR--GALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLA 267 (543)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 267 (543)
++++++.+++.+.+.|...+...+....++.++.++++| +...++...+.++|.+++|.+++.+.+. .|||+.|++.
T Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~-~gw~~~f~~~ 179 (393)
T PRK15011 101 WNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG-FSFTVMYLSA 179 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-cChHHHHHHH
Confidence 999999987766555555556777888888888876655 3456788889999999999999998765 7999999999
Q ss_pred HHHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhcc-chhHHHHH
Q 009099 268 AIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSS-RYWKVVSV 345 (543)
Q Consensus 268 ~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~ 345 (543)
++..++..+. .+++||.++. +++.++ + . ....++ +..+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~----------------------------~---~~~~~~~~~~~~~~~ 223 (393)
T PRK15011 180 AVAFIVCGVMVWLFLPSMRKE---LPLATG--T----------------------------L---EAPRRNRRDTLLLFV 223 (393)
T ss_pred HHHHHHHHHHHHhhcCccCCC---Cccccc--c----------------------------c---cccccccccHHHHHH
Confidence 8877765554 3445765431 100000 0 0 000011 11121111
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLL 422 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 422 (543)
...... ..+.....+.|.+. +..+.+.... ......++.+++.++.|+++||+++|+.+..+.....+....+
T Consensus 224 ~~~~~~----~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK15011 224 ICTLMW----GTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM 299 (393)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 111111 12333334555544 4467665543 3344456677889999999999999987776654444433322
Q ss_pred HHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcc
Q 009099 423 SLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGI 502 (543)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~ 502 (543)
... .+.+..+....+.+...+.. .+....+..|..|+ .++++.++++...++|..++|.+.|.+.|..|+
T Consensus 300 ~~~--------~~~~~~l~~~~l~~~~~g~~-~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~ 369 (393)
T PRK15011 300 LMA--------HSPAILLGLQLLNAIYIGIL-GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNY 369 (393)
T ss_pred HHH--------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 211 01122222222222222211 11223456788885 499999999999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHhhh
Q 009099 503 STVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~ 521 (543)
+..+.+.+++.+++.++.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 370 HAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888887777777665544
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=7.8e-28 Score=238.84 Aligned_cols=373 Identities=14% Similarity=0.050 Sum_probs=229.1
Q ss_pred HHHHHHHHHhhhhHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH---
Q 009099 114 ILFGYHLGVVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA--- 189 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--- 189 (543)
+...+..+...+.+| ++.+++|++..+. |++.+++.+++.++++++|+++||+|||++++++..+.+++.....
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~--g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 97 (420)
T PRK09528 20 FFFFFIWSSWFSFFPIWLHDINGLSGTDT--GIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYV 97 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344445554 5566699999998 9999999999999999999999999999999887766655443221
Q ss_pred Hhhh-----HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHH
Q 009099 190 TAQS-----VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (543)
Q Consensus 190 ~~~~-----~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 264 (543)
.++. +...++++++.|.+.....+....+..+ . .+++++.++......++|..++|.+++.+.+ .+|++.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--~~~~~~f 173 (420)
T PRK09528 98 FAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN--INPQINF 173 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh--cCchHhH
Confidence 1111 1112223333333333222333333222 2 2446788889999999999999999998864 5899999
Q ss_pred HHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHH
Q 009099 265 GLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVV 343 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 343 (543)
++.+++.++..+..++. +|+++....+++ ++ + ++++......++.+|++.++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~----------------------~~~~~~~~~~~~~l~~~~~~~l 228 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPSTAKVANA-LG--A----------------------NASAVSLKDALALLKLPKFWFL 228 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccchhhhccc-hh--c----------------------ccccccHHHHHHHccCCCeEee
Confidence 99888877666555554 333221100000 00 0 0000111223456667665544
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHH
Q 009099 344 SVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLL 421 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 421 (543)
.+................+.|......+.+.+.. ........++.+++.++.|++.||+++|+.+..+..+..++.++
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l 308 (420)
T PRK09528 229 VLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG 308 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH
Confidence 4333222222111122233344333333333332 23455566777899999999999999999988888777776666
Q ss_pred HHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHH-HHHHHHHHHHHHHHhhHHHHHhh
Q 009099 422 LSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVAL-SLGMHWISNFVIGLYFLSVVNKF 500 (543)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~g~~~~~~ 500 (543)
+.+. .+.+.......+.+.+... ..+....++.+.+|++.+++..+. .++...+|.+++|.+.|.+.|..
T Consensus 309 ~~~~--------~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~ 379 (420)
T PRK09528 309 SGFA--------TGPLEVSILKLLHAFEVPF-LLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI 379 (420)
T ss_pred HHhc--------ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5542 1122222223333333222 122333467888899988888765 67778899999999999999999
Q ss_pred ccccchhhhhHHHHHHHHhhheeccc
Q 009099 501 GISTVYLGFATVCLLAVLYIAVNVVE 526 (543)
Q Consensus 501 g~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (543)
||+..|.+.+++.++..++.++..++
T Consensus 380 G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 380 GFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999998888877776655554443
No 78
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=7.8e-28 Score=235.04 Aligned_cols=344 Identities=21% Similarity=0.202 Sum_probs=228.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHH
Q 009099 109 ACLGAILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL 187 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 187 (543)
.++..+........+.+..|. +++++|++..+. +++.+++.+++.++++++|+++||+|||+.++++.++.+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQL--GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHh--hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 344555556667778889995 999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHhh-hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC---------CC
Q 009099 188 CATAQ-SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG---------NP 257 (543)
Q Consensus 188 ~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---------~~ 257 (543)
+++++ +++.+++.|+++|++.+ ..+....++.|++|+++|++++++.....++|..+++.+++.+.. ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 84 AGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred HHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999 99999999999999965 456678899999999999999999997777777777666654432 12
Q ss_pred CchHHHHH-HhHHHHHHHH-HHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhh
Q 009099 258 LWWRTMFG-LAAIPSILLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLF 335 (543)
Q Consensus 258 ~~wr~~f~-~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (543)
.+||+.|+ ..+++..+.. +...+.+|+|+.. +++++... +. ... ..+++.....++.+
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~---~~~------------~~~~~~~~~~~~~~ 222 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGK---PATGKLSF--KG---ARW------------SVGTGALGDQLKVF 222 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCccc---ccchhccc--cc---ccc------------cccchhHHHHHHHH
Confidence 48999994 4454444433 3334456655311 00000000 00 000 00000111345566
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHH
Q 009099 336 SSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSF 412 (543)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 412 (543)
+++..+...+........ ......+.+.+++ ..+.+.... ......+..++++++.|++.||+++|+....+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~ 298 (366)
T TIGR00886 223 RDRHTWILALLYSVTFGS----FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSF 298 (366)
T ss_pred hccchhhHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHH
Confidence 666666554443333332 3334445555554 356665533 455567788899999999999999988777776
Q ss_pred HHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHH
Q 009099 413 TGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWIS 485 (543)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 485 (543)
.....+..++.+.... +.+.........+...+.+.+. ...+.++.+..| +.+|+++|+.+..+++|
T Consensus 299 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 299 LGVAMGAFLVVLGLVS----PLSLAVFIVLFVALFFFSGAGN-GSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHhcCCC----cchHHHHHHHHHHHHHHhcccc-chhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6665555555432110 0011222222333333333322 344456778877 57999999999888765
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=5.7e-27 Score=231.13 Aligned_cols=368 Identities=20% Similarity=0.130 Sum_probs=251.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-----cccc-hhhhhhHHHHHH
Q 009099 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-----GRTR-TFQLDAVPLAAG 184 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~-~~~~~~~~~~i~ 184 (543)
...+..+...+.....+|.+.++.|++.+++ |++..+... .+..+++|+++||+ |||| +++++.++.+++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~i--g~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTI--GFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 3456667777788889999999999999999 999777765 58999999999999 8875 788888888888
Q ss_pred HHHHHHh---hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchH
Q 009099 185 AFLCATA---QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (543)
Q Consensus 185 ~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 261 (543)
..+.++. .+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+...|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 8887877 4578888888888888888889999999999999999999999999999999999998888876435999
Q ss_pred HHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 262 TMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 262 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
..|++.++..++..+..++.||+++. ++++++..+. .+.+++++++++.++
T Consensus 162 ~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~~~~~--------------------------~~~~~~~l~~~~~~~ 212 (402)
T PRK11902 162 NTYLLMAGLMLAGALTTLWAPEPEVP---ARPPRSLGEA--------------------------VVGPLRDFFSRRGAW 212 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccc---ccccchhHHH--------------------------HHHHHHHHHhCcCHH
Confidence 99999888777665555556765431 1111000000 112345677788777
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHH--HHH-HHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVAASA--LVG-AANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
...+...+......... ....+.+.++.|.+....... ..+ ++.+++.++++++.||+++|+.+..+..+..+.
T Consensus 213 ~~l~~~~l~~~~~~~~~---~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~ 289 (402)
T PRK11902 213 ALLLLIVLYKLGDAFAG---SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHHhHHHHHH---HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 66555444333221111 222334445577776655222 333 457889999999999999998877666655555
Q ss_pred HHHHHHHHhhcccccccchhHHHHHHH---HHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHH
Q 009099 419 MLLLSLSFTWKVLAPYSGTLAVLGTVL---YVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLS 495 (543)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 495 (543)
.+.+...... +.+.+.......+ ...............++.+.+|.+. .++.+....++..+++.+.|.
T Consensus 290 ~l~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~ 361 (402)
T PRK11902 290 NLGYWVLAVT----PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGY 361 (402)
T ss_pred HHHHHHHHhc----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 4333221110 0111222222211 1111111223344446667777554 455566667788777789999
Q ss_pred HHHhhccccchhhhhHHHHHHHHhhhe
Q 009099 496 VVNKFGISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 496 ~~~~~g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
+.|..|++..|.+.+++++++.++.+.
T Consensus 362 l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 362 LVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888888777665543
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=6.7e-27 Score=228.97 Aligned_cols=354 Identities=14% Similarity=0.065 Sum_probs=243.6
Q ss_pred HHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhccc----chhhhhhHHHHHHHHHH
Q 009099 113 AILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRT----RTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr----~~~~~~~~~~~i~~~~~ 188 (543)
.+......+.+.|.+|.+.+|+|.+..+. |++.+++.++..++++++|+++||+||| +.+.++..+. ....+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~i--G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETI--GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHH--HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 44455566788889999999999999999 9999999999999999999999999994 3332222221 22333
Q ss_pred HHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhH
Q 009099 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAA 268 (543)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~ 268 (543)
..++++|.+++.|++.|++.+...+...+++.++ .++|+++++......++|..+||++++++.+. .|||..|++.+
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-~g~~~~f~~~~ 165 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-FGEQAILWILT 165 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-cChhHHHHHHH
Confidence 4468899999999999999988888888887776 35588889999999999999999999999866 79999998887
Q ss_pred HHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHH
Q 009099 269 IPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAA 348 (543)
Q Consensus 269 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 348 (543)
+..++..+..++.||.++ ++++++ +.++...++++++|++.++...+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~~--------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~ 215 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGESRQ--------------------------QESAGWPAWKALLKEPTVWRFLLCVS 215 (382)
T ss_pred HHHHHHHHHHHccCCCCC----cccccc--------------------------ccccccchHHHHHcChhHHHHHHHHH
Confidence 655544444444454321 000000 00011235678888888777665544
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHH
Q 009099 349 LFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSF 426 (543)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 426 (543)
+.... ......+.+.+.++.|.+.... ......++.++..++.+++.||+++|+.+..+....+++.+++...
T Consensus 216 l~~~~----~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~- 290 (382)
T PRK11128 216 LLQGS----HAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST- 290 (382)
T ss_pred HHHHH----hHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-
Confidence 44333 2223334444556677765533 4445567778888999999999999999888887777766555432
Q ss_pred hhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHH-HHHHHHHHHHHHhhHHHHHhhccccc
Q 009099 427 TWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSL-GMHWISNFVIGLYFLSVVNKFGISTV 505 (543)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~~~~~~g~~~~ 505 (543)
.+.+..++..++.+.+++.. .+....+..+. +++.+++..++.+ ....+|..++|.+.|.+.|..|+ ..
T Consensus 291 -------~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~ 360 (382)
T PRK11128 291 -------TALPWLIVIQILHCGTFTVC-HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GV 360 (382)
T ss_pred -------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HH
Confidence 12233444445555544432 33333456665 5556788899887 44566778999999999999986 45
Q ss_pred hhhhhHHHHHHHH
Q 009099 506 YLGFATVCLLAVL 518 (543)
Q Consensus 506 ~~~~~~~~~~~~~ 518 (543)
++..+++.+++.+
T Consensus 361 ~~~~~~~~~~~~~ 373 (382)
T PRK11128 361 FWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 6655655554433
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=3.1e-26 Score=225.67 Aligned_cols=370 Identities=15% Similarity=0.095 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHhhhhHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH--
Q 009099 112 GAILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC-- 188 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~-- 188 (543)
..+........+.|.+|. +.+++|.+..+. |++.+++.+++.++++++|+++||+|||+.++.+++..+++....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 87 (396)
T TIGR00882 10 FFFLYFFIMSAYFPFFPIWLHDVNGLSKTDT--GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFI 87 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 344444555566666654 566799999998 999999999999999999999999999999988877766544332
Q ss_pred -HHh-----hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 189 -ATA-----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 189 -~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
.+. +.+..+++.|++.|++.+...+....+..+.. +++++.++......++|..++|.+++.+.+ .+||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--~~~~~ 163 (396)
T TIGR00882 88 YVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS--IDPQI 163 (396)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc--cCchH
Confidence 112 23344567788899988888888777776643 234567788888889999999999998764 68999
Q ss_pred HHHHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 263 MFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
.|++.+++.++..+..+.. ||+|+.. +.++.. +.+.++.+..+.++++|++.++
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~ 218 (396)
T TIGR00882 164 VFWLGSGFALILMLLLMFAKPKAPSSA----TVANAL---------------------GANASAFSLKLALELFRQRKFW 218 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCchhh----hhhccc---------------------ccccCCCCHHHHHHHHcCCcHH
Confidence 9999988887766554443 4433210 000000 0000111223456778887766
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASM 419 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 419 (543)
...+..................|...+..+.+.+.. ........+..+++.+..+++.||+++|+.+.++..+.++..
T Consensus 219 ~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~ 298 (396)
T TIGR00882 219 MFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRI 298 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 554433332222111112233333333322222222 234455567778888999999999999999888877777766
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHH-HHHHHHHHHHHHHHhhHHHHH
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVAL-SLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~g~~~~ 498 (543)
.+.... .+.+......++.+.+.... ......+..+..|++.++++.+. .+....+|+++++.+.|.+.|
T Consensus 299 ~~~~~~--------~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~ 369 (396)
T TIGR00882 299 IGSSFA--------TTALEVVILKMLHAFEVPFL-LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD 369 (396)
T ss_pred HHHHhc--------CChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH
Confidence 554332 12233333333333332211 11222355666777777777766 678899999999999999999
Q ss_pred hhccccchhhhhHHHHHHHHhhh
Q 009099 499 KFGISTVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 499 ~~g~~~~~~~~~~~~~~~~~~~~ 521 (543)
..|+...|.+.+++.++..++..
T Consensus 370 ~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 370 SIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred hcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888877766543
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=5e-26 Score=254.68 Aligned_cols=341 Identities=18% Similarity=0.036 Sum_probs=233.4
Q ss_pred HhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH---HHhhhHHHHH
Q 009099 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---ATAQSVQTMI 198 (543)
Q Consensus 122 ~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~l~ 198 (543)
....+.+.+..+++.+......+++.+++.+++.++++++|+++||+|||++++++.++..++.+++ ..+++++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (1146)
T PRK08633 28 HKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAF 107 (1146)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 3344666777788877666556999999999999999999999999999999999887766655543 4457899999
Q ss_pred HHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC--------CCchHHHHHHhHHH
Q 009099 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN--------PLWWRTMFGLAAIP 270 (543)
Q Consensus 199 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--------~~~wr~~f~~~~~~ 270 (543)
++|+++|++.+...++..+++.|++++++|++++++...+..+|.++|+++++++... ..+|++.+.+.++.
T Consensus 108 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 108 AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988643 23455555444443
Q ss_pred HH-HHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHH
Q 009099 271 SI-LLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAAL 349 (543)
Q Consensus 271 ~~-~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (543)
.. +.++..+++||.++....+.+... ..... .....++.+++++.++..++...+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------~~~~~~~~l~~~~~~~~~~~~~~~ 243 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPEVFDKKK-YLFPK-----------------------LLWRNLKLLRSDRVLWLAIIGLSY 243 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCcccccccc-cccHH-----------------------HHHHHHHHHhcCcHHHHHHHHHHH
Confidence 33 333444556776542111100000 00000 001124456667766665554444
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHcCCCch---hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHH
Q 009099 350 FLFQQLAGINAVVYYSTSVFRSVGIESD---VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSF 426 (543)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 426 (543)
..+.. .....++..++.+..+.+.. ........++.+++.++.+++.||+++++.+.++.++.+++.+++.+..
T Consensus 244 ~~~~~---~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 244 FWFIS---QLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHH---HHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh
Confidence 33322 12222333333344666655 3356667788899999999999999998888777776666665555431
Q ss_pred hhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 427 TWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
+.+..++..++++.+.+.. .+...+++.+..|++.||+++|+.+++.++|.++++.+.+.+..
T Consensus 321 --------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 321 --------SLASVLVLFFLFGFSAGLF-IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred --------hHHHHHHHHHHHHHHHHHh-hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233334444444444332 33445578899999999999999999999999888766665543
No 83
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=4.5e-26 Score=227.52 Aligned_cols=387 Identities=14% Similarity=0.057 Sum_probs=237.3
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh-hcccchhhhhhHHHHHHHHHHHHhhhHHH-HHHHH
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQSVQT-MIIGR 201 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~~~~-l~~~r 201 (543)
..+..++.+++|.+.++. +++.+.|.....+..+++|+++|| +||||+++++.+++++++++++++.+... ++++|
T Consensus 35 ~~l~~yl~~~lg~~~~~a--~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~ 112 (489)
T PRK10207 35 GILAVFFVKQLGFSQEQA--FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIAL 112 (489)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 346678888999998888 999999998888889999999999 99999999999999999999999876554 55899
Q ss_pred HHHhhhccccccchhhhhhccCCccc--chhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEI--RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
+++|+|.|...+...+++.|++|+++ |++++++++.+.++|..+||.+++++.+. .|||+.|++.++..++..+...
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~-~gw~~~F~i~~i~~~~~~~~~~ 191 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK-FGYSVTYNLCGAGLIIALLVYF 191 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-hChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998774 57899999999999999999999999876 7999999987554333333333
Q ss_pred ccCCChhHHH--hcCChHHHHHHHH-------------HHhCchhhHHHHH--------HHHHhccCCCCcccchhhhhc
Q 009099 280 LSPESPRWLF--QQGKKSEAEKSIQ-------------TLYGKERVSEVML--------DLTNAGQGSAEPEAGWFDLFS 336 (543)
Q Consensus 280 ~~~e~~~~~~--~~~~~~~~~~~~~-------------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~ 336 (543)
+.++..+... .++++.+...... ............. ..-..++.+. .+++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~------~~~~r 265 (489)
T PRK10207 192 ACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKL------DKTGR 265 (489)
T ss_pred HcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC------CHHHH
Confidence 3222111000 0010011000000 0000000000000 0000000000 13445
Q ss_pred cchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-c-----CCCch-hHHHHHHHHHHHHHHHHHHHhhhccCChh---
Q 009099 337 SRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-V-----GIESD-VAASALVGAANVFGTAVASSLMDRQGRKN--- 406 (543)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--- 406 (543)
++.+....+. +.....+..+.......+.+.++ . |+... .....+..+..++..++.+++.||+++|+
T Consensus 266 ~r~~~~~~l~--~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~ 343 (489)
T PRK10207 266 NKMFVAFVLM--LEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDL 343 (489)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 4444332221 11111112223332333333331 1 22211 22333344556677778899999999886
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHh-hc-ccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHH
Q 009099 407 ----LLTFSFTGMAASMLLLSLSFT-WK-VLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLG 480 (543)
Q Consensus 407 ----~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 480 (543)
.+.+++++.+++++.+..... .. .....+.++.+...++.+.+.. ...+....++.+..|++.+|.++|+.+.
T Consensus 344 ~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~-~~~~~g~~~~~~~aP~~~~g~~~g~~~l 422 (489)
T PRK10207 344 SMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGEL-FISALGLAMIAALVPQHLMGFILGMWFL 422 (489)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 366677777766654432111 11 1111223334444444444443 3455556678888999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHH----------hhccccchhhhhHHHHHHHHhhhe
Q 009099 481 MHWISNFVIGLYFLSVVN----------KFGISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 481 ~~~~g~~~~~~~~g~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
..++|+.++..+...... ...+.+.|...++..+++.++.+.
T Consensus 423 ~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 423 TQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999877765421 112445666666666655555444
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.3e-26 Score=208.16 Aligned_cols=362 Identities=19% Similarity=0.173 Sum_probs=274.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH
Q 009099 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 185 (543)
+.+++...++.++......+++|.+++.|+++..+. +++..+++.+|.+++++.|++.+|+|+|+-++.|+.++++++
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a--~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEA--SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHH--HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 344455667778888888999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHH---HhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC------
Q 009099 186 FLCA---TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN------ 256 (543)
Q Consensus 186 ~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------ 256 (543)
.+.. ...+|..++++-++.|.|.+...+.++.+++...++++..+.+++.+...++|.+++|++++.+...
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 9884 5678999999999999999999999999999999998889999999999999999999999887651
Q ss_pred ------------CCchHHHHHHhHHHHHHHHHHhccc--CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhcc
Q 009099 257 ------------PLWWRTMFGLAAIPSILLALGMGLS--PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQ 322 (543)
Q Consensus 257 ------------~~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (543)
...|+++|...+...+++.+..... |+.+....+
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~-------------------------------- 220 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPS-------------------------------- 220 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccc--------------------------------
Confidence 1238888888877776666554442 333220000
Q ss_pred CCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHHHHHHHHHHHHHhh
Q 009099 323 GSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA--ASALVGAANVFGTAVASSLM 399 (543)
Q Consensus 323 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~g~l~ 399 (543)
..+.++....++++++.++...++.+++...+..... |.+.+..+ .|.+.... ......++.++|++++.++.
T Consensus 221 ~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gs----fl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm 296 (422)
T COG0738 221 LGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGS----FLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALM 296 (422)
T ss_pred ccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHH----HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011112457888899999888888887776554444 44444444 56555544 66777889999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHH
Q 009099 400 DRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSL 479 (543)
Q Consensus 400 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 479 (543)
.|+...|.+.+..+...+.++...+. +..+.+....+.+.+.+ ...|..++...+..| + .....|...
T Consensus 297 ~~~~~~k~Laf~a~~~ill~~~~~l~---------~g~v~~~~l~~ig~F~s-imfPTIfslal~~l~-~-~ts~~s~~l 364 (422)
T COG0738 297 SRIKPEKYLAFYALIAILLLLAVALI---------GGVVALYALFLIGLFNS-IMFPTIFSLALKNLG-E-HTSVGSGLL 364 (422)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHh---------cChHHHHHHHHHHHHhH-HHHHHHHHHHHhccC-c-cccccceee
Confidence 99999998887776655555555543 22344444444444443 466777778888888 3 334444555
Q ss_pred HHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHH
Q 009099 480 GMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAV 517 (543)
Q Consensus 480 ~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 517 (543)
...-+|+++.|++.|++.|..|....+.....+|.+.+
T Consensus 365 ~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 365 VMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred eeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 66778999999999999999997777665555555544
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=3e-26 Score=255.35 Aligned_cols=377 Identities=15% Similarity=0.038 Sum_probs=244.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhh---hhHHH
Q 009099 106 VGVACLGAILFGYHLGVVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL---DAVPL 181 (543)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~---~~~~~ 181 (543)
+...+++.+.+++....+..... .+..+.+.+... ..++..+++.+.+.++++++|+++||+|||+++.. +.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 17 FWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNA-LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHH-HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 33344555555554443333333 333333333222 23888999999999999999999999999997533 22333
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchH
Q 009099 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (543)
Q Consensus 182 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 261 (543)
.+..+.+...+++++++++|+++|++.+...|+..+++.+++++++|++++++.+++.++|.++||++++++... .+|+
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~-~~~~ 174 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS-GNFV 174 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-cccH
Confidence 333333444589999999999999999999999999999999999999999999999999999999999999866 7999
Q ss_pred HHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 262 TMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 262 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
+.|+..++..++.+++.+++|+++.. .++.... ....+. ....++.+.+++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~-----------------------~~~~~~~~~~~~~~~ 228 (1140)
T PRK06814 175 ILVALLMGIAVLGWLASLFIPKTGNA--APDLKID-RNIIRS-----------------------TITLLKYAKADKRIW 228 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeec-cchHHH-----------------------HHHHHHHHhcCchHH
Confidence 99955555555555556666665431 0000000 000000 011244566677777
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
...+...+..+. ...+..+.|.+.++ ++.+.. .......+++.+++.++.|++.|+..+++.+..+.++.+++
T Consensus 229 ~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 304 (1140)
T PRK06814 229 LAILGISWFWLV----GAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLF 304 (1140)
T ss_pred HHHHHHHHHHHH----HHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHH
Confidence 666655544433 22333344554443 566554 33667778899999999999998887766665555555444
Q ss_pred HHHHHHHHhhc------------ccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHH
Q 009099 419 MLLLSLSFTWK------------VLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISN 486 (543)
Q Consensus 419 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 486 (543)
.+.+.+..... .....+.+...+..++++.+.+.. .+...+++.+..|++.+|+++|+.+++.+++.
T Consensus 305 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~ 383 (1140)
T PRK06814 305 GLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLY-IVPLFAALQAWANPAHRARVIAANNVLNAAFM 383 (1140)
T ss_pred HHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHh-HHHHHHHHHhhCCcccceeeeHHHHHHHHHHH
Confidence 44333210000 000012233344444444444433 33455688899999999999999999999999
Q ss_pred HHHHHhhHHHHHh-hccccchhhhhHHHHH
Q 009099 487 FVIGLYFLSVVNK-FGISTVYLGFATVCLL 515 (543)
Q Consensus 487 ~~~~~~~g~~~~~-~g~~~~~~~~~~~~~~ 515 (543)
.+++.+.|.+.+. .++...+.+.+++.++
T Consensus 384 ~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 384 VAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999999998753 3455555544443333
No 86
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.8e-25 Score=200.77 Aligned_cols=368 Identities=19% Similarity=0.199 Sum_probs=279.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
+..+..+.+..+.-.-..+.++|+++.+++|+|+|.+.. |+++++..+.+.+.+++..++..|+|.++.+..++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~a--GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVA--GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHH
Confidence 444555566667777788889999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++.++-... +.+.++.+-.+.|.|.+...+..+.++-+.||++ -+..+|++....++|..+++.+...+.++..+||.
T Consensus 89 ~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 89 AGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 999998887 7888899999999999999999999999999876 79999999999999999999999988877568999
Q ss_pred HHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHH
Q 009099 263 MFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKV 342 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 342 (543)
...+-++++++.++.++. ... +.+.. ..+.+..+-..++|++.-|.
T Consensus 167 aL~~WAl~allAl~~WlP--q~~-------r~~~~-------------------------~~~~~~~~~~~vw~~~~aW~ 212 (395)
T COG2807 167 ALGFWALLALLALLIWLP--QAL-------REQAA-------------------------SIATKLVSVRKVWRSPLAWQ 212 (395)
T ss_pred HHHHHHHHHHHHHHHHhh--hcc-------ccccc-------------------------ccccccccccccccCchhHH
Confidence 999998888876665432 111 11000 00112223345778887776
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccC-ChhHHHHHHHHHHHHH
Q 009099 343 VSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQG-RKNLLTFSFTGMAASM 419 (543)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~ 419 (543)
+.+.+.+.. ..++.+..|+|.++.+.|++.... ......+..++..+....+.+|.. +|+.......++.++.
T Consensus 213 vtLfmGlqS----~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~ 288 (395)
T COG2807 213 VTLFMGLQS----LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGL 288 (395)
T ss_pred HHHHHHhhH----HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 655544444 447888888999999999988755 667778899999999999999754 5566666667777777
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccc-cccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALL-LPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
+.+.+... ...+++ .++++.+.+.. .++.... ....-.++..+.-.|+.+.++++-+.+||.++|.+.|
T Consensus 289 ~G~~~~P~------~~~~lw---~~llG~G~G~~-F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhD 358 (395)
T COG2807 289 VGLLLAPG------QLPILW---ALLLGLGQGGA-FPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHD 358 (395)
T ss_pred HHHHHhhh------hHHHHH---HHHHhCccchH-HHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHH
Confidence 77765311 111222 34444443332 3333333 3344556778899999999999999999999999999
Q ss_pred hhc-cccchhhhhHHHHHHHHhhhe
Q 009099 499 KFG-ISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 499 ~~g-~~~~~~~~~~~~~~~~~~~~~ 522 (543)
..| |...+..++.+.++..+.-+.
T Consensus 359 a~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 359 ATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHhh
Confidence 887 656666666655555554443
No 87
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=2.9e-28 Score=220.40 Aligned_cols=341 Identities=14% Similarity=0.045 Sum_probs=242.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhc
Q 009099 142 LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISE 221 (543)
Q Consensus 142 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 221 (543)
+.|++.+++.+.+.+.+++.|.+.||+|+|..+++|+.++...++++++.++++.++++|.+||+|.++..+...++++|
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd 186 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLAD 186 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHH
Confidence 44999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHH
Q 009099 222 ISPTE-IRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKS 300 (543)
Q Consensus 222 ~~~~~-~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 300 (543)
.||++ +|++++|+...+.++|.++||.+||.+.+. .|.+.+|++.++++++-..+.+++-|+.+. ++
T Consensus 187 ~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~---~~-------- 254 (464)
T KOG3764|consen 187 VFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-AGKSAPFLVLAIVLLLDGALQLLVIEPTEM---DP-------- 254 (464)
T ss_pred HcccchhhhHHHHHHHHHHhccceecCCcccchHhh-cCCcCcHHHHHHHHHHHHHHHHheeCcccc---Cc--------
Confidence 99965 479999999999999999999999999977 899999999999998877766665333220 00
Q ss_pred HHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCc--hh
Q 009099 301 IQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIES--DV 378 (543)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 378 (543)
+..++..+++++++++..+........... .....-+.+.....+....+. .+
T Consensus 255 ----------------------~~~~~~~~~~~Ll~dP~I~~~agai~~~n~---~lafLePtlslwm~e~m~~p~w~~G 309 (464)
T KOG3764|consen 255 ----------------------DSTEQGTPMWSLLMDPYILLIAGAITFSNS---SLAFLEPTLSLWMLETMFTPGWEVG 309 (464)
T ss_pred ----------------------cccccCccHHHHHhCchHhhhhcchhhccc---hHHHhCcccHHHHHHhccCCCccee
Confidence 011234456777888776654443332222 112222233333344444222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCccccc
Q 009099 379 AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVP 458 (543)
Q Consensus 379 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (543)
..+....+...++..+.|.+.||++.-+.+.....+..++............ ...+....+..+.+........|..
T Consensus 310 ~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~---~~L~vp~~~l~~~i~~~dasl~P~l 386 (464)
T KOG3764|consen 310 LAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSI---AQLWVPNFGLGFGIGLADASLIPTL 386 (464)
T ss_pred eeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhH---HHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 3566677888999999999999999544444433333334333322211100 0111112222222222222233444
Q ss_pred ccccccccChh---hhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhhee
Q 009099 459 ALLLPEIFASR---IRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVN 523 (543)
Q Consensus 459 ~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 523 (543)
. +..|....+ ..|...++......+|.++||.+.|.+++..|+++...+.++..++-.-+..++
T Consensus 387 ~-~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 387 G-YLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred H-HhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 344443334 678999999999999999999999999999999999888888887766555443
No 88
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=6.4e-25 Score=219.38 Aligned_cols=405 Identities=16% Similarity=0.104 Sum_probs=250.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHH-HHH--cCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh-hcccchhhhhhHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYL-AKD--LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i-~~~--~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~ 185 (543)
++..+...+......+.+|.+ .++ +|++..+. +++.+.+.+++.++++++|+++|| +|||++++++.++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~a--g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~ 93 (475)
T TIGR00924 16 FFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQA--FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGH 93 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 344555555555555556654 555 89998888 999999999999999999999999 899999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCccc---chhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 186 FLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEI---RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
++.+++++++.++++|++.|++.|...+...++++|++++++ |++++++++.+.++|.++||.+++++.+. .+|++
T Consensus 94 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~-~g~~~ 172 (475)
T TIGR00924 94 FMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN-YGYHV 172 (475)
T ss_pred HHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh-cChHH
Confidence 999999999999999999999999999999999999998764 88899999999999999999999998765 78999
Q ss_pred HHHHhHHHHHHHHHHhcccC----CChhHHHhcCChHHHHHHHHHH----------------hCchhhHHHHH-------
Q 009099 263 MFGLAAIPSILLALGMGLSP----ESPRWLFQQGKKSEAEKSIQTL----------------YGKERVSEVML------- 315 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~------- 315 (543)
.|++.++..++..+..++.+ +.|+. .++.+++..+..... ...........
T Consensus 173 ~f~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (475)
T TIGR00924 173 GFNLAAVGMVIGLLTFFAGRHMLRDIGSV--PDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAV 250 (475)
T ss_pred HHHHHHHHHHHHHHHHHHcccccccCCCC--CCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99988765554433333322 21110 000000000000000 00000000000
Q ss_pred HHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-cCCC--c----hhHHHHHHHHHH
Q 009099 316 DLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIE--S----DVAASALVGAAN 388 (543)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~----~~~~~~~~~~~~ 388 (543)
....... ..+++.+..+..|......+++...+++. .+.......+.+.++ .+.+ . ......+..+..
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~----~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~i 325 (475)
T TIGR00924 251 IIFFFRL-AFKPRLDAVARNKMYAYIVLFLEAVVFWV----LYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWV 325 (475)
T ss_pred HHHHHHH-HHhccCCHHHHhHHHHHHHHHHHHHHHHH----HHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHH
Confidence 0000000 00000011111111112222222222222 233333333333222 2211 1 223444455555
Q ss_pred HHHHHHHH----Hhhhc-cCChhHH--HHHHHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHHHHhhcCccccccc
Q 009099 389 VFGTAVAS----SLMDR-QGRKNLL--TFSFTGMAASMLLLSLSFTWKVL-APYSGTLAVLGTVLYVLSFSLGAGPVPAL 460 (543)
Q Consensus 389 ~~~~~~~g----~l~d~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (543)
++..++.. ++.+| .+.+... .++.++.+++++.+.+....... .+.+.++.+...++.+.+. ....|....
T Consensus 326 il~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge-~~~~p~~~~ 404 (475)
T TIGR00924 326 VVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGE-LMISPLGLS 404 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHH-HHHhHHHHH
Confidence 55554433 44444 2223333 56777777777666543211111 1223444444445554444 345677777
Q ss_pred ccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecc
Q 009099 461 LLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 461 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
++.+..|++.||+++|+......+|..+++.+.....+..++...|...++++++..++.++..|
T Consensus 405 ~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 405 WWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999888777777777777777777766665554443
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=6.4e-26 Score=226.96 Aligned_cols=335 Identities=15% Similarity=0.131 Sum_probs=226.8
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh----hcccc-hhhhhhHHHHHHHHHHHHhhh------H
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGRTR-TFQLDAVPLAAGAFLCATAQS------V 194 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~------~ 194 (543)
..+++.+++|++..+. |++.++..+..++..|+.|+++|| +|||| .++.+...++++.+++.+.++ +
T Consensus 22 l~~~~~~~~g~s~~~~--g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFV--GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCCCHHHH--HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 6677888999999998 999999999999999999999997 67754 667788888888888877654 4
Q ss_pred HHHHHHHHHHhhhccccccchhhhhhccC-CcccchhhhHHHHHHHHHHHHHHHHhhcccC------CCCCchHHHHHHh
Q 009099 195 QTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLPLA------GNPLWWRTMFGLA 267 (543)
Q Consensus 195 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~------~~~~~wr~~f~~~ 267 (543)
+.+++.+++.+++.+...++..++..|.. +++||++..++...+..+|..+++.+.+.+. +...+||+.+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56777888899998887778888888887 4688999999988888888766555443332 1236899999999
Q ss_pred HHHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHH
Q 009099 268 AIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVG 346 (543)
Q Consensus 268 ~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 346 (543)
+++.++..+. .++.+|.++. .++.++ ++.+.+..++++++++.++...+.
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~---~~~~~~--------------------------~~~~~~~~~~~l~~~~~~~~~~~~ 230 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSE---IPKNIE--------------------------KKLSLKQIFKALFKNDQLLILCLA 230 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCC---CCcccc--------------------------cCCCHHHHHHHHhCCHHHHHHHHH
Confidence 9888776554 3445665421 000000 000011234566777777665554
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHH-cCCCch-hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHH
Q 009099 347 AALFLFQQLAGINAVVYYSTSVFRS-VGIESD-VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSL 424 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 424 (543)
..+..... .....+.+++.+. .+.... ........++.+++.++.+++.||+|+|+.+..+..+.+++.+.+.+
T Consensus 231 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 306 (437)
T TIGR00792 231 YLFYNLAF----NIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFF 306 (437)
T ss_pred HHHHHHHH----HHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 44443332 2222222332221 221111 22445557888899999999999999999998888777776665543
Q ss_pred HHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccC-------hhhhhHHHHHHHHHHHHHHHHHHHhhHHHH
Q 009099 425 SFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFA-------SRIRAKAVALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
.. .+.+...+..++.+.+.+. ..+..++++.|..+ ++.+|.+.|+.+....+|..+++.+.|.+.
T Consensus 307 ~~-------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 307 AG-------SNLPLILVLIILAGFGQNF-VTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred cc-------hhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1122223333333333332 23445556666654 556899999999999999999999999999
Q ss_pred Hhhccc
Q 009099 498 NKFGIS 503 (543)
Q Consensus 498 ~~~g~~ 503 (543)
+..||.
T Consensus 379 ~~~G~~ 384 (437)
T TIGR00792 379 GIIGYV 384 (437)
T ss_pred HHcCCC
Confidence 988864
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=2.4e-26 Score=206.73 Aligned_cols=350 Identities=16% Similarity=0.114 Sum_probs=214.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhh
Q 009099 141 VLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYIS 220 (543)
Q Consensus 141 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 220 (543)
...|.+.+.|.+++.+.++.+|.++||+|||+++++|++..++...+.+++.|+..++++|++.|+..| ...++.++++
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAiis 146 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAIIS 146 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHHHH
Confidence 356999999999999999999999999999999999999999999999999999777777999999988 6678899999
Q ss_pred ccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC--CCc-hHHH--HHHhHHHHHH-HHHHhcccCCChhHHHhcCCh
Q 009099 221 EISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN--PLW-WRTM--FGLAAIPSIL-LALGMGLSPESPRWLFQQGKK 294 (543)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~~-wr~~--f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~ 294 (543)
|.+++++|+++++..+..+++|.++||.+|+++... ..| +... -++..+++.. .....+++||+-+....+++.
T Consensus 147 dV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~ 226 (451)
T KOG2615|consen 147 DVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEH 226 (451)
T ss_pred hhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccc
Confidence 999999999999999999999999999999998761 011 1111 1222223322 344566778884321111000
Q ss_pred HHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHH---HHHHHHHHHHHHhhhhHHHHHHHHHH-HH
Q 009099 295 SEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKV---VSVGAALFLFQQLAGINAVVYYSTSV-FR 370 (543)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 370 (543)
.+..+..+......+.+ +..-....+++.... ..-.+.+..+.+...+....++...+ .+
T Consensus 227 ~~~~~~~~~~~~~~~~~----------------~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~ 290 (451)
T KOG2615|consen 227 STLQEAADDRLALLKFA----------------RIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHG 290 (451)
T ss_pred cchhhhhhhhhhhcchh----------------hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcC
Confidence 11111100000000000 000011122221111 11112222333333344555555544 24
Q ss_pred HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccC--ChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHH
Q 009099 371 SVGIESDVA--ASALVGAANVFGTAVASSLMDRQG--RKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLY 446 (543)
Q Consensus 371 ~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (543)
.+|+++.+. .....++.+.+..+...+..+|.. -+..+.....++.-..+++... ........+..+.
T Consensus 291 rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~--------~~~~~l~~~s~l~ 362 (451)
T KOG2615|consen 291 RFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA--------RTPVVLYLGSTLK 362 (451)
T ss_pred ccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc--------ccchhhhHHHHHH
Confidence 577777655 445555666665555555566654 3333333333333333333221 1112222223333
Q ss_pred HHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh-ccccchhhhhHHHHHH
Q 009099 447 VLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF-GISTVYLGFATVCLLA 516 (543)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~-g~~~~~~~~~~~~~~~ 516 (543)
.+.. ....+..+.++....|++.||+++|+..+.+.++.++||.+.|.+.... +-+..+...+.+.+++
T Consensus 363 sf~~-A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 363 SFST-ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHH-HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 3222 2234455557888999999999999999999999999999998876532 3444555555555555
No 91
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=5.5e-25 Score=218.73 Aligned_cols=368 Identities=20% Similarity=0.167 Sum_probs=260.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 189 (543)
+++.++..+...+.....+.+..++.-|+... +++.++..+...+.++++|.++||++||++++.+-++.++..++.+
T Consensus 16 w~a~~iS~lG~~~~~va~~wlv~~lt~S~~~v--alv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~ 93 (524)
T PF05977_consen 16 WIAQLISNLGDWMQTVALAWLVTQLTGSPLMV--ALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLA 93 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Confidence 34445555555566667777777776666666 9999999999999999999999999999999999988876655544
Q ss_pred Hh-----hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHH
Q 009099 190 TA-----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (543)
Q Consensus 190 ~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f 264 (543)
+. .+.+.+++.-++.|++.+...|+..+++.|..|+++...++++.+...++..++||.++|.+... .|-.+.|
T Consensus 94 ~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~-~G~~~~f 172 (524)
T PF05977_consen 94 VLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAF-FGAAAAF 172 (524)
T ss_pred HHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH-HHHHHHH
Confidence 32 47888999999999999999999999999999999999999999999999999999999998754 6778888
Q ss_pred HHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHH
Q 009099 265 GLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVS 344 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 344 (543)
.+.++..++.++.+..++.+++ +++.++ ++..+. -+..++-+.+++..+..+
T Consensus 173 ~inalsfl~~i~~l~~~~~~~~---~~~~~~--e~~~~~-----------------------l~~G~ryv~~~~~l~~~l 224 (524)
T PF05977_consen 173 LINALSFLISILALLRWKPPPP---PSSLPR--ERFFSA-----------------------LREGLRYVRSSPPLRSVL 224 (524)
T ss_pred HHHHHHHHHHHHHHHHcccccc---ccccch--hhhhhh-----------------------HHHHHHHHhcchHHHHHH
Confidence 8887766554444433332211 011000 010010 011223334455555444
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHH
Q 009099 345 VGAALFLFQQLAGINAVVYYSTSVFR-SVGIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLL 421 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 421 (543)
+...++.+. ...+...+|.+.+ .++.++. +......+++.++|.++.+++.+|+++++.+..+.++.+++++.
T Consensus 225 ~~~~~~~l~----~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~ 300 (524)
T PF05977_consen 225 LRSFLFNLF----ASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLL 300 (524)
T ss_pred HHHHHHHHh----hhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHH
Confidence 333333222 1222233455443 3555555 34677789999999999999999999988888888777777766
Q ss_pred HHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 009099 422 LSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG 501 (543)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g 501 (543)
+++.. +.+...+..++.+.+... ......+.+++..|++.||++++++.++...+..+|..+.|.+.+..|
T Consensus 301 lal~~--------~~~~~~~~l~l~G~~~~~-~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 301 LALSP--------SFWLALIALFLAGAAWII-ANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG 371 (524)
T ss_pred Hhcch--------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 66531 223333333343433332 333445578899999999999999999999999999999999999999
Q ss_pred cccchhhhhHHHHHHHHhhh
Q 009099 502 ISTVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~ 521 (543)
....+.+.+++.+++.++.+
T Consensus 372 ~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 372 VRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888777766666555444
No 92
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=3.7e-25 Score=227.01 Aligned_cols=302 Identities=15% Similarity=0.119 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH
Q 009099 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 186 (543)
..+++..+......+..+..++.+.++|+++..+. |++.+.+.++++++.++.|++.||+|||+++.+++++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~--G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSS--GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcc--eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 44455666667778888999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhh---------------------------------------------------hHHHHHHHHHHHhhhccccccch
Q 009099 187 LCATAQ---------------------------------------------------SVQTMIIGRVLAGIGIGISSAIV 215 (543)
Q Consensus 187 ~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~ 215 (543)
++++.+ .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 988763 25567899999999999999999
Q ss_pred hhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCC---------------------CchHHHHHHhHHHHHHH
Q 009099 216 PLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP---------------------LWWRTMFGLAAIPSILL 274 (543)
Q Consensus 216 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~~ 274 (543)
.+++.|++|+++|+++++++..+..+|..+|+++++++.+.. ..|+..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998876321 12778888888888776
Q ss_pred HHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHH
Q 009099 275 ALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQ 354 (543)
Q Consensus 275 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 354 (543)
.+.++++|++.+....+.+.+..++. ......+... .......++....++.+++++.++...+...+....
T Consensus 274 ~v~l~~~p~~lp~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~- 345 (633)
T TIGR00805 274 SIPFFFFPKALPKEGKRVNVDVHETE--KLEKSEDKSR-----KKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA- 345 (633)
T ss_pred HHHHHhCccccCCcccccchhhhhhh--cccccccccc-----hhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH-
Confidence 66666666543210000000000000 0000000000 000000001123456788888877766655555443
Q ss_pred hhhhHHHHHHHHHHHHH-cCCCchhH--HHHHHHH-HHHHHHHHHHHhhhccCC--hhHHHHHHHHHHHHHHH
Q 009099 355 LAGINAVVYYSTSVFRS-VGIESDVA--ASALVGA-ANVFGTAVASSLMDRQGR--KNLLTFSFTGMAASMLL 421 (543)
Q Consensus 355 ~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~-~~~~~~~~~g~l~d~~g~--~~~~~~~~~~~~~~~~~ 421 (543)
+..+..|+|.++++ ++.++... ......+ +.+++.+++|+++||++. |+.+..+.++..++.++
T Consensus 346 ---~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 346 ---FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred ---HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 45555666666654 67776655 3333333 567899999999999884 56666666666655444
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=3.1e-24 Score=211.99 Aligned_cols=380 Identities=20% Similarity=0.191 Sum_probs=236.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
+..+..+++......+.....+..++.+..|+|-++. . .|+.+.+.++.+++.++.|+++|.||||++++.+.++..
T Consensus 43 i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~-~--~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~v 119 (599)
T PF06609_consen 43 IASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDN-W--SWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGV 119 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCcc-c--hHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHH
Confidence 3334444444444555555666788999999998754 4 799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
+|+++++.++|...++.+..+.|+|.|... .....++|..|.|.|+...++...........++.++..+..+ .+|||
T Consensus 120 vG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-~~WRw 197 (599)
T PF06609_consen 120 VGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-SGWRW 197 (599)
T ss_pred hHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-CCcch
Confidence 999999999999999999999999987665 4556689999999998877777666555555677777665544 78999
Q ss_pred HHHHhHHHHHHHHHHhcccCCChhHHHhcCCh---HHHHHHHHHHhCc---hhhHHHHHHHH------------------
Q 009099 263 MFGLAAIPSILLALGMGLSPESPRWLFQQGKK---SEAEKSIQTLYGK---ERVSEVMLDLT------------------ 318 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~------------------ 318 (543)
.|++..+...+.++..+++..+|++...++++ .+..+.++.+... ....-....+.
T Consensus 198 ~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~l 277 (599)
T PF06609_consen 198 IFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPL 277 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhH
Confidence 99999888766554433322222222222111 1111111111000 00000000000
Q ss_pred ------------HhccCCCCcccchhhhhccc-hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCc-----hhHH
Q 009099 319 ------------NAGQGSAEPEAGWFDLFSSR-YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIES-----DVAA 380 (543)
Q Consensus 319 ------------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 380 (543)
.+.....+++.-..+++|++ .+....+..++... ..+....+|......-++.+. ....
T Consensus 278 viG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~---~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~ 354 (599)
T PF06609_consen 278 VIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGM---NFFSVNILWPQQVVNVFGSDPISITEIGWI 354 (599)
T ss_pred HHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhccCCCcccceeehh
Confidence 00001112223344677763 33332222222222 223344455554443344332 2335
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCChh-HHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccc
Q 009099 381 SALVGAANVFGTAVASSLMDRQGRKN-LLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPA 459 (543)
Q Consensus 381 ~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (543)
....+.+..++.++.|.+..++++-| .++++.+++.+++.+++.. . +.+....+...++.+.+.+.... ...
T Consensus 355 s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~-~-----~~n~~~~i~~~~l~g~giG~~~~-~~~ 427 (599)
T PF06609_consen 355 SSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV-R-----PDNKNAAIAFLVLAGFGIGGILV-PAI 427 (599)
T ss_pred hhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc-c-----CCCcchHHHHHHHHHHhHHHHHH-HHH
Confidence 56677788888889999999888754 4456665655554444432 1 11222223333333333333222 223
Q ss_pred cccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHH
Q 009099 460 LLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 460 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
..++-..|++..|++.|+..+++.+|+.+|..+...++
T Consensus 428 ~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 428 VIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35566789999999999999999999999998886655
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=9.1e-26 Score=213.60 Aligned_cols=365 Identities=13% Similarity=0.061 Sum_probs=233.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcch-hhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH
Q 009099 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENT-VLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 185 (543)
+++|+..|+.-+ +...+.+.|++.+|+|++.++ . |.+.++++.+|++++++.|+++||+|.|+++.++++.+++.+
T Consensus 30 ~~lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv~--G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 30 LYLCFYGFMAQF-RPGESFITPYLLTVLNFTEETVT--NEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHhc--chHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 334555555544 556677999999999999999 7 999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHH
Q 009099 186 FLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFG 265 (543)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 265 (543)
++.++++++..+.+.|++.|++.|..+ +...++..|+|+++|+++.++..++..+|.++++++++++. . .|||+.+.
T Consensus 107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-~gWr~y~~ 183 (511)
T TIGR00806 107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-LGWISYST 183 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-cCchhHHH
Confidence 999999999999999999999999999 99999999999999999999999999999999999998854 3 78987654
Q ss_pred Hh---HHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCc-------ccchhhhh
Q 009099 266 LA---AIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEP-------EAGWFDLF 335 (543)
Q Consensus 266 ~~---~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~ 335 (543)
+. .....+.+++.+++|..++.+.-+++++.......+......... . +.....+... ...+++..
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~y 259 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG---G-KLEDYLGTCRDSFLVRMLSELVTIY 259 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCc---c-ccchhhhhhhhHHHHHHHHHHHHHh
Confidence 43 333344556677778555533322211100000000000000000 0 0000000000 01122333
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCc---hhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHH
Q 009099 336 SSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIES---DVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSF 412 (543)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 412 (543)
+++... -..+++.....++..+..|...+.+....+. .+..-.+..+.+.+..+..|++-.++.+-..+.++.
T Consensus 260 ~n~~vl----~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v 335 (511)
T TIGR00806 260 RNPQLL----LWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAV 335 (511)
T ss_pred cCcchh----hhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHH
Confidence 343322 2233344445567788888887776654322 233444455666778888898866654433333333
Q ss_pred HHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHh
Q 009099 413 TGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLY 492 (543)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 492 (543)
+...-+.+++.... ..+.+...+..+++...+..... +...-++.....+..|...|+.+++.-+-..+-..+
T Consensus 336 ~s~~~~gll~~m~~------t~~Iw~~Y~~yvlf~~~y~flit-ia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~i 408 (511)
T TIGR00806 336 VSAIQAGLVFWMSQ------SHDIWVLYVTYVLFRGIYQFLVP-IATFQIASSLSKELCALVFGINTFVATALKTIITAV 408 (511)
T ss_pred HHHHHHHHhhhhhc------ccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEE
Confidence 32222222222221 12445556666666666665433 333345555566667888998887766655554433
No 95
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=5.5e-25 Score=213.79 Aligned_cols=324 Identities=15% Similarity=0.098 Sum_probs=217.6
Q ss_pred HHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-----cccch-hhhhhHHHHHHHHHHHHh---
Q 009099 121 GVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-----GRTRT-FQLDAVPLAAGAFLCATA--- 191 (543)
Q Consensus 121 ~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-~~~~~~~~~i~~~~~~~~--- 191 (543)
..+++..|.+.+|+|+|.++. |++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++.
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~--g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTI--GFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHH--HHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 456778999999999999998 988655 455555 89999999998 89886 567777888877777777
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc--------hHHH
Q 009099 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW--------WRTM 263 (543)
Q Consensus 192 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~--------wr~~ 263 (543)
.+++.+....++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+... .+ ||..
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-EFANTGLITLWGYI 159 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-cccccccccccHHH
Confidence 56667777888888888888899999999999999999999999999999999999999887755 55 9999
Q ss_pred HHHhHHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccch---
Q 009099 264 FGLAAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRY--- 339 (543)
Q Consensus 264 f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 339 (543)
|++.++..++..+..++ .+|+.+. ++++++..+. .+..++++++++.
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~ 210 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQED---ASVPKPLTQA--------------------------VLKPIREFFQRKNMIQ 210 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcc---cccchhHHHH--------------------------HHHHHHHHHHhcCchH
Confidence 99998877765555443 4554221 0000000000 0112344555554
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHH-HHHHHHHHHHHHhhhccCChhHHHHHHHHHH
Q 009099 340 WKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVG-AANVFGTAVASSLMDRQGRKNLLTFSFTGMA 416 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 416 (543)
.+...+...+... .+.....+.+.+.++.|++.... .....+ ++.+++.++++++.||+|+|+.+..+.++.+
T Consensus 211 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~ 286 (356)
T TIGR00901 211 ALLLLLLIVLYKL----GDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQA 286 (356)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 3332222222222 23344455555556677777654 333333 5677899999999999999998888777766
Q ss_pred HHHHHHHHHHhhcc---cccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHH
Q 009099 417 ASMLLLSLSFTWKV---LAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHW 483 (543)
Q Consensus 417 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 483 (543)
++..++.+...... ......+......++.+.+.+ ...+...++..|.+|++.||+.+|+.+...+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 287 LTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGG-LGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhH-HHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 66554443211000 000011222222222233333 2445566689999999999999999887664
No 96
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=5.9e-24 Score=211.69 Aligned_cols=405 Identities=13% Similarity=0.085 Sum_probs=259.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
++|..+..........+.. ..++...+.+++++|++..+. +++.++. ..+.+++++.|++.||+|+|+++.++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgls~~~l--~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNLTQRDL--STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcCHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3454444444444444433 344567889999999999988 8888774 44567788899999999999999999999
Q ss_pred HHHHHHHHHHh------hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHH-HHHhhccc
Q 009099 181 LAAGAFLCATA------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILA-ALVAGLPL 253 (543)
Q Consensus 181 ~~i~~~~~~~~------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~~~~~l 253 (543)
+++++++++++ ++++.+++.|++.|+|.+...+.+...+.+||| ++||++.|+...+.++|..+ +++..+++
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 689999999999999999998999999999997 56999999999999999864 66666555
Q ss_pred CCCCCchHHHHHHhHHHHHHHHHHhcc-c--CCChhHHHhcCChHHHHHHHHHHhC------------------------
Q 009099 254 AGNPLWWRTMFGLAAIPSILLALGMGL-S--PESPRWLFQQGKKSEAEKSIQTLYG------------------------ 306 (543)
Q Consensus 254 ~~~~~~wr~~f~~~~~~~~~~~~~~~~-~--~e~~~~~~~~~~~~~~~~~~~~~~~------------------------ 306 (543)
. .+|++.|++.+++.++..++.+. + |+.+++..++++.++..+..++..+
T Consensus 180 ~---~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~ 256 (591)
T PTZ00207 180 S---DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILI 256 (591)
T ss_pred H---HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHH
Confidence 3 46888888888888765544333 3 4444433222211111111000000
Q ss_pred --------------c-hhhH----H-HH---HHHH----------------H-----------------hc--------c
Q 009099 307 --------------K-ERVS----E-VM---LDLT----------------N-----------------AG--------Q 322 (543)
Q Consensus 307 --------------~-~~~~----~-~~---~~~~----------------~-----------------~~--------~ 322 (543)
. .... . .. .-.. + .+ +
T Consensus 257 ~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (591)
T PTZ00207 257 VFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVD 336 (591)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccccccccccccccccccccccccccc
Confidence 0 0000 0 00 0000 0 00 0
Q ss_pred -CCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc-CCCc-h--hH-HHHHHHHHHHHHHHHHH
Q 009099 323 -GSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSV-GIES-D--VA-ASALVGAANVFGTAVAS 396 (543)
Q Consensus 323 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-~~~~~~~~~~~~~~~~g 396 (543)
..++...++++.+++..+|.+++..++.... ...+...+.++.+.+ |.+. . .. +..+.++++.+|++..|
T Consensus 337 ~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~----gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g 412 (591)
T PTZ00207 337 YIAPQFQETFIEGLKTARLWCLLWSIFCCVGA----HFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMS 412 (591)
T ss_pred CCCCCCcchHHHHHhchhHHHHHHHHHHhhCc----hheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHH
Confidence 0011112666677777777777665555443 344455566666777 6522 2 22 56788999999999999
Q ss_pred HhhhccCCh--------hHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccCh
Q 009099 397 SLMDRQGRK--------NLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFAS 468 (543)
Q Consensus 397 ~l~d~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 468 (543)
++.....+| ...+....++.++.+++++.. ......+..++.+.+++.. .++....++|++.
T Consensus 413 ~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~--------p~~~L~~~~~lvg~~~G~~-~~~~~~i~selFg- 482 (591)
T PTZ00207 413 YFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTL--------PKAALPLPYFIAAFANGFM-AATIALVTRTIFA- 482 (591)
T ss_pred HHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHC--------CccHhHHHHHHHHHHhhHh-HHHHHHHHHHHhc-
Confidence 987322222 222222222455555554431 1123455555555555543 4455558899999
Q ss_pred hhhhHHHHHHHHHHHHHHHHH-HHhhHHHHHhh----------c---cccchhhhhHHHHHHHHhhheecccC
Q 009099 469 RIRAKAVALSLGMHWISNFVI-GLYFLSVVNKF----------G---ISTVYLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 469 ~~~~~~~g~~~~~~~~g~~~~-~~~~g~~~~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
++-|+-.-+.....-+|..+. ..++|.++|+- | ++.+|++++++++++.++...+..++
T Consensus 483 k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 483 KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 778887777777777777665 56788888753 1 56789999998888877765544333
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.93 E-value=1.6e-23 Score=205.91 Aligned_cols=370 Identities=13% Similarity=0.045 Sum_probs=240.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHH--HHHHHHHHHHHHHhh-HhhhhhhcccchhhhhhHHH-H
Q 009099 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWI--VSSLLAGATVGSFTG-GSLADKFGRTRTFQLDAVPL-A 182 (543)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~--~s~~~l~~~i~~~~~-g~l~dr~Grr~~~~~~~~~~-~ 182 (543)
..+....+..+...+...+.+|.+.+|.|.+.+++ |.+ .++..+...+.+|++ ++..||+||||..++.+.+. +
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~i--Gl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTAL--AFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHH
Confidence 34455668888888899999999999999999999 997 466788888888888 44799999999875555332 2
Q ss_pred HHHHHHH-H--hhh-HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009099 183 AGAFLCA-T--AQS-VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (543)
Q Consensus 183 i~~~~~~-~--~~~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 258 (543)
+.....+ + ..+ ..+++..-++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~-~ 160 (390)
T TIGR02718 82 ACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK-F 160 (390)
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 2222222 1 222 334445556666677777777778888998888888888889888899999999888887765 7
Q ss_pred chHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccc
Q 009099 259 WWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSR 338 (543)
Q Consensus 259 ~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (543)
+||..|++.+++.++..+..++++|+++. +++.++ + +..++++++|++
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~~--~---------------------------~~~~~~~~l~~~ 208 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKDRAVA---SPEAPL--A---------------------------RRASLFRFFRRP 208 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccch--h---------------------------hHHHHHHHHcCc
Confidence 99999999998887766555555433210 000000 0 011245667777
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHH-HHHHHHHHHHHHhhhccCChhHHHHHHHHH
Q 009099 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVG-AANVFGTAVASSLMDRQGRKNLLTFSFTGM 415 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 415 (543)
..+......++..... .....+.+.+.++.|++.... .....+ ...+++.++.|++.||+|+|+.+..+..+.
T Consensus 209 ~~~~~~~~~~l~~~~~----~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 209 LAWSLLALALLSAMTA----VSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred CHHHHHHHHHHHHHHH----HHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 6665555444443322 222334455556678887755 233333 456677899999999999999888776655
Q ss_pred HHHHHHHHHHHhhcccccccchhHHHHHHHH-HHHhhcCcccccccccccccCh-hhhhHHHHHHHHHHHHHHHHHHHhh
Q 009099 416 AASMLLLSLSFTWKVLAPYSGTLAVLGTVLY-VLSFSLGAGPVPALLLPEIFAS-RIRAKAVALSLGMHWISNFVIGLYF 493 (543)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~~~~~~~~ 493 (543)
++..+........ . .. ..........++ ....+... +.......+..++ +.+++.+++.+...++|..++|.+.
T Consensus 285 ~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~ 360 (390)
T TIGR02718 285 GSLALLWFAQAAF-W-LA-PGIAVAWSCSAFGSLITGITS-VAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA 360 (390)
T ss_pred HHHHHHHHHHHHc-c-cC-CcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333222211110 0 00 111111111111 11222222 2223344444454 7899999999999999999999999
Q ss_pred HHHHHhhccccchhhhhHHHHHHHHh
Q 009099 494 LSVVNKFGISTVYLGFATVCLLAVLY 519 (543)
Q Consensus 494 g~~~~~~g~~~~~~~~~~~~~~~~~~ 519 (543)
|.+.|..|+...|.+.+++.+++.++
T Consensus 361 G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 361 GYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 99999999988888877777666544
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=1.7e-23 Score=210.38 Aligned_cols=384 Identities=15% Similarity=0.101 Sum_probs=224.1
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh-hcccchhhhhhHHHHHHHHHHHHhh-hHHHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQ-SVQTMIIGRVL 203 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l 203 (543)
...++.+++|++..+. +++.+.+........+++|+++|| +|||+.++++.++.+++.+++++++ +.+.++++|++
T Consensus 44 l~~yl~~~lg~s~~~a--~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l 121 (500)
T PRK09584 44 MAVYLVKQLGMSEADS--ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAT 121 (500)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 5567778999998887 888888876666767899999999 5999999999999999999998874 56677788999
Q ss_pred HhhhccccccchhhhhhccCCccc--chhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcc-
Q 009099 204 AGIGIGISSAIVPLYISEISPTEI--RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL- 280 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~- 280 (543)
+|++.|...+...+++.|++|+++ |..++++++.+.++|..++|.+++++.+. .|||+.|++.++..++..+.+++
T Consensus 122 ~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~-~g~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 122 IAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK-YGWSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998654 45688999999999999999999999866 79999999887655443332222
Q ss_pred ---cCCChhHHHhcCChHHHHHHH-----------HH-HhCchhhHHHHH-------HHHHhccCCCCcccchhhhhccc
Q 009099 281 ---SPESPRWLFQQGKKSEAEKSI-----------QT-LYGKERVSEVML-------DLTNAGQGSAEPEAGWFDLFSSR 338 (543)
Q Consensus 281 ---~~e~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~ 338 (543)
++|.++. ..+++.+...... .. .....+...... ......... ...+.-+++
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 274 (500)
T PRK09584 201 QRWVKQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAF-----AMKGAARRK 274 (500)
T ss_pred HHHhccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHh-----hcCHHHHHH
Confidence 2322110 0000000000000 00 000000000000 000000000 000111111
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-c-----CCC-chhHHHHHHHHHHHHHHHHH----HHhhhccCChhH
Q 009099 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-V-----GIE-SDVAASALVGAANVFGTAVA----SSLMDRQGRKNL 407 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~~~~~~~~~~~----g~l~d~~g~~~~ 407 (543)
.... +..++.....+..+.....++.....+ . |.. +......+..+..++..++. +++.+|.+..+.
T Consensus 275 ~~~~--~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~ 352 (500)
T PRK09584 275 MIVA--FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHK 352 (500)
T ss_pred HHHH--HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHH
Confidence 1111 111122222222233333333322111 1 221 12223344444444444444 555666666677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHH
Q 009099 408 LTFSFTGMAASMLLLSLSFTWKVL-APYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISN 486 (543)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 486 (543)
+.+++++.+++++.+......... ...+.++.+...++.+.+ .....|....++.+..|++.||+++|+......+|.
T Consensus 353 ~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~g-e~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~ 431 (500)
T PRK09584 353 FAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIG-ELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAA 431 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHH-HHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 888888888888887665332111 111223333333333333 344567777789999999999999998887777777
Q ss_pred HHHHHhhHHHHH----------hhccccchhhhhHHHHHHHHhhh
Q 009099 487 FVIGLYFLSVVN----------KFGISTVYLGFATVCLLAVLYIA 521 (543)
Q Consensus 487 ~~~~~~~g~~~~----------~~g~~~~~~~~~~~~~~~~~~~~ 521 (543)
.++..+.+.... ..++...|...++++++..++.+
T Consensus 432 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 432 LIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred HHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 666666543211 12355677777766554444333
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.91 E-value=9.4e-22 Score=192.18 Aligned_cols=391 Identities=14% Similarity=0.081 Sum_probs=249.9
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhh----hhcccchhhhh-hHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGRTRTFQLD-AVPLAAG 184 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~~~~~-~~~~~i~ 184 (543)
+...+...+......+..+.+.+++|.+.... +++..+..+...+.+|+.|+++| |+||||+++++ .+...++
T Consensus 10 ~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~--~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~ 87 (477)
T TIGR01301 10 ASVAAGVQFGWALQLSLLTPYVQELGIPHAWA--SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHH
Confidence 33344445556666667777889999998888 99999999999999999999999 59999998875 6666666
Q ss_pred HHHHHHhhhHH-----------------HHHHHHHHHhhhccccccchhhhhhccCCcccc--hhhhHHHHHHHHHHHHH
Q 009099 185 AFLCATAQSVQ-----------------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIR--GALGSVNQLFICVGILA 245 (543)
Q Consensus 185 ~~~~~~~~~~~-----------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~ 245 (543)
.++.+++++++ .++++-.+..++.....++..++++|.+|+++| +.+.++.+...++|.++
T Consensus 88 l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il 167 (477)
T TIGR01301 88 VILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL 167 (477)
T ss_pred HHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 67777876653 223333444557777888889999999998865 68999999999999999
Q ss_pred HHHhhcccC--C-------C-----CCchHHHHHHhHHHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhh
Q 009099 246 ALVAGLPLA--G-------N-----PLWWRTMFGLAAIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERV 310 (543)
Q Consensus 246 ~~~~~~~l~--~-------~-----~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (543)
|+.+++... + . ..+.|+.|++.++..++..+. .+..+|.|... +++.+++ +..
T Consensus 168 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~-~~~~~~~------~~~----- 235 (477)
T TIGR01301 168 GYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG-SDDFINS------EAA----- 235 (477)
T ss_pred HHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc-cccchhh------hcc-----
Confidence 999887641 0 0 026799999988877775554 44567765311 0000000 000
Q ss_pred HHHHHHHHHhccCCCCcccchhhhhcc-----chhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH--cCCC--------
Q 009099 311 SEVMLDLTNAGQGSAEPEAGWFDLFSS-----RYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS--VGIE-------- 375 (543)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------- 375 (543)
+.++.+.+..++++++. +..+.+.+..++.++. ...+..|.+.+..+ ++.+
T Consensus 236 ----------~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a----~f~~~~y~T~~vg~~v~~~~~~~~~~y~ 301 (477)
T TIGR01301 236 ----------PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIA----WFPFILFDTDWMGREVYGGSVNQGAKYD 301 (477)
T ss_pred ----------cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHH----HHHHHHhccHHHHHHHcCCCCcchhHHH
Confidence 00000011122333332 3444444444443332 33333333333322 1111
Q ss_pred ch----hHHHHHHHHHHHHHHHHHHHhhhccCC-hhHHHHHHHHHHHHHHHHHHHHhhccc-----------cccc--ch
Q 009099 376 SD----VAASALVGAANVFGTAVASSLMDRQGR-KNLLTFSFTGMAASMLLLSLSFTWKVL-----------APYS--GT 437 (543)
Q Consensus 376 ~~----~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~--~~ 437 (543)
.. ........+...+.+++..++.+|+|+ |+....+.++.++++....+....... .+.. .+
T Consensus 302 ~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (477)
T TIGR01301 302 DGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKA 381 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHH
Confidence 11 113344455556777888999999985 666688888888887777654321100 0000 12
Q ss_pred hHHHHHHHHHHHhhcCcccccccccccccCh--hhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc--cccchhhhhHHH
Q 009099 438 LAVLGTVLYVLSFSLGAGPVPALLLPEIFAS--RIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG--ISTVYLGFATVC 513 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g--~~~~~~~~~~~~ 513 (543)
..++...+.+..+. ....+.++++++..++ +..|..+|+.|.+..+..++.....|.+.+..| ....+.+.++..
T Consensus 382 ~~l~~~~~~Gi~~A-~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~ 460 (477)
T TIGR01301 382 SALIVFAILGIPLA-ITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAA 460 (477)
T ss_pred HHHHHHHHhhHHHH-HHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHH
Confidence 33333444444443 2456777788888884 456999999999999999999998888777666 445666777778
Q ss_pred HHHHHhhheecccCCC
Q 009099 514 LLAVLYIAVNVVETKG 529 (543)
Q Consensus 514 ~~~~~~~~~~~~~~~~ 529 (543)
+++++..++.+|+.+.
T Consensus 461 ~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 461 FVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHhCCCCCC
Confidence 8888888877777654
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=4e-21 Score=185.77 Aligned_cols=373 Identities=20% Similarity=0.162 Sum_probs=250.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhc-ccchhhhhhHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG-RTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-rr~~~~~~~~~~~i~~~~~ 188 (543)
+...+...+..+.+.|.++..-++.|.|..++ |.+.++..+...++++++|.++||++ +|+++.+..++.++.....
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qI--G~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQI--GILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 33445556667777788888889999999999 99999999999999999999999986 5778888888888877777
Q ss_pred HHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHh-hcccCCC--CCchHHHHH
Q 009099 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVA-GLPLAGN--PLWWRTMFG 265 (543)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~-~~~l~~~--~~~wr~~f~ 265 (543)
...++++.+++..++..+......|...++..+...+ ++.-.|-.....++|.+++... ++.+... ..+..+.++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 8889999998888888888888888888888887763 4455566666666666655332 1122111 122344566
Q ss_pred HhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 266 LAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 266 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
+.+...++.....+.+|+.|.. ++.+++.+ +....+..+++|+|+....++
T Consensus 164 i~~~~~~ll~~~~l~lp~~~~~---~~~~~~~~--------------------------~~~~~~~~~llk~~~~~~Fll 214 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTPPK---RSAKESVK--------------------------KLLGLDALKLLKNPRFLVFLL 214 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCccc---cccCCCcc--------------------------cccchHHHHHhcCccHHHHHH
Confidence 6666666665556667777631 11000000 001112346788888776666
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcC-CCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYSTSVFRSVG-IESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLL 422 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 422 (543)
...+.... ......|.+.++++.| .+.. .....+..++.++.-+..+++..|+|.++++.++.+..++=..++
T Consensus 215 ~~~l~~~~----~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 215 AAFLIGIS----HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 55554443 3445556666677777 3333 334455567888888999999999999999999998888877777
Q ss_pred HHHHhhcccccccchhHHHH----HHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHH-HHHHHHHHHHhhHHHH
Q 009099 423 SLSFTWKVLAPYSGTLAVLG----TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGM-HWISNFVIGLYFLSVV 497 (543)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~~~ 497 (543)
+.... +.+..... ..+-+..++.... ....++.+..|++.|+++.++++.. ..+|..+|..+.|+++
T Consensus 291 a~~~~-------~~~~~~~~~~l~q~lhG~tf~~~~~-a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~ 362 (400)
T PF03825_consen 291 AYFSD-------PWPFIVALQLLGQLLHGLTFGLFHA-ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLY 362 (400)
T ss_pred HHhcC-------CcHHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 65411 11111111 1234444443332 3344899999999999999998876 5689999999999999
Q ss_pred Hhhccccc------hhhhhHHHHHHHHhhheecccC
Q 009099 498 NKFGISTV------YLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 498 ~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
|+.|.+.. +.+.+++.++..++.+++.|++
T Consensus 363 ~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 363 DAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99886643 3444444444444444444443
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.90 E-value=1.7e-21 Score=194.60 Aligned_cols=335 Identities=13% Similarity=0.109 Sum_probs=215.0
Q ss_pred hhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh----hcccc-hhhhhhHHHHHHHHHHHHhhh------
Q 009099 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGRTR-TFQLDAVPLAAGAFLCATAQS------ 193 (543)
Q Consensus 125 ~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~------ 193 (543)
.+..++.+++|++.... |.+.++..+..++..|+.|+++|| +|||| .++.+.+..+++.++....++
T Consensus 31 ~l~~~~t~~~gls~~~~--g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIM--GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 36677888999999998 999999999999999999999998 78754 555677777777766555543
Q ss_pred HHHHHHHHHHHhhhccccccchhhhhhccC-CcccchhhhHHHHHHHHHHHHHHHHhhcc----cC--CCCCchHHHHHH
Q 009099 194 VQTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLP----LA--GNPLWWRTMFGL 266 (543)
Q Consensus 194 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~----l~--~~~~~wr~~f~~ 266 (543)
++.+++..++.+.+......+..++.+|+. +++||.+..++...+..+|..+++.+... +. +...+|+..+.+
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i 188 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 456666777777777777777788999988 56789988888877777776666543322 22 113579988888
Q ss_pred hHHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 267 AAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 267 ~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
.+++.++..+..++ .+|.++. ++++ +.+....++++++++.++....
T Consensus 189 ~~ii~~v~~~~~~~~~~e~~~~--~~~~------------------------------~~~~~~~~~~~~~n~~~~~l~~ 236 (444)
T PRK09669 189 MGLLGVVLFFCCFFMTKERYTP--EVDN------------------------------SSSVWKDLKLLLGNSQWRIMFI 236 (444)
T ss_pred HHHHHHHHHHHHhCCeEEecCC--CCcC------------------------------CCCHHHHHHHHhCCchHHHHHH
Confidence 88877665544433 3443210 0000 0011223456778888777665
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchh-HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYSTSVFRSVGIESDV-AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSL 424 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 424 (543)
..++.............+|..+.. +..... .......+..+++.++.+++.||+|+|+....+..+.++..+.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~y~~~~~~---~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 313 (444)
T PRK09669 237 FNVVLLTAVVTRGGATLYYVNYVL---LRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF 313 (444)
T ss_pred HHHHHHHHHHHHhhhhheeeeeec---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 544433322111122222222221 111111 2333445667788889999999999999888776655543332222
Q ss_pred HHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccC-------hhhhhHHHHHHHHHHHHHHHHHHHhhHHHH
Q 009099 425 SFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFA-------SRIRAKAVALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
. ++.+.+...+..++.+.+.+ ...+..+++++|..+ .+..|...|+.+.+..+|..+++.+.|.+.
T Consensus 314 ~------~~~~~~~~~~~~~i~g~~~~-~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 314 I------PPSNVWLIFALNILFNFIQN-LTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred h------CcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11122233333444444444 344566667777764 334577889999999999999999999999
Q ss_pred Hhhccc
Q 009099 498 NKFGIS 503 (543)
Q Consensus 498 ~~~g~~ 503 (543)
+..||.
T Consensus 387 ~~~Gy~ 392 (444)
T PRK09669 387 AWVDYV 392 (444)
T ss_pred HHcCCC
Confidence 988874
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.5e-23 Score=180.57 Aligned_cols=388 Identities=15% Similarity=0.068 Sum_probs=242.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh-hcccchhhhhhH
Q 009099 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAV 179 (543)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~ 179 (543)
++...+..+|+..|..++.......+..+...|.+++.++. .++.+.|.....+.+.++|++.|| +|.|...++-++
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akf--tLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKF--TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeee--eeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 44666777788889999999888888888999999998888 899999999999999999999996 788888777777
Q ss_pred HHHHHHHHHHH---hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC
Q 009099 180 PLAAGAFLCAT---AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN 256 (543)
Q Consensus 180 ~~~i~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 256 (543)
...++.++.+. .+.+|.++++||+.|+|.-...++-+.++.-||..+|.+.++|+.....-+|..+-..+.+++.+.
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 77788777654 589999999999999999888888899999999999999999999999999887766665555432
Q ss_pred CCchHHHH--HHhHHHHHHHHHHhcccCCChhHHHhcC-ChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhh
Q 009099 257 PLWWRTMF--GLAAIPSILLALGMGLSPESPRWLFQQG-KKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFD 333 (543)
Q Consensus 257 ~~~wr~~f--~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (543)
.+ ..| .....+++...+-......+-......+ .++.+.+.+ +.++....+...+.+
T Consensus 199 -~~--~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAeril-----------------h~e~g~~Ge~pkLtd 258 (459)
T KOG4686|consen 199 -MG--RMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERIL-----------------HLEEGFLGEEPKLTD 258 (459)
T ss_pred -HH--HhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH-----------------hhhcCcccCCccccc
Confidence 10 000 0000000000000000000000000000 001111111 111111111111112
Q ss_pred hhc-cchhHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHH
Q 009099 334 LFS-SRYWKVVSVGAALFLFQQLAGINAVVYYSTSV-FRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLT 409 (543)
Q Consensus 334 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 409 (543)
... .+.+|.+.+...++... ..-+....+.+ .+.+|+++... ..........+..++.|.++||+|++-..+
T Consensus 259 v~~f~ppfw~~~iicv~yyva----~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv 334 (459)
T KOG4686|consen 259 VNTFYPPFWVLVIICVLYYVA----WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWV 334 (459)
T ss_pred ccccCccHHHHHHHHHHHHHH----HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhH
Confidence 211 23444444433333332 12222223333 35578877654 455555667788889999999999987766
Q ss_pred HHHHHHHHH-HHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHH
Q 009099 410 FSFTGMAAS-MLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFV 488 (543)
Q Consensus 410 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 488 (543)
.+..+..+. -.++.+.. +-......+.+..+.+. ....+.+++.+.|++..|++.|.++.+.++|-.+
T Consensus 335 ~~a~~~tl~~H~~l~Ft~----------lsPy~~m~~lGLsysll-AcslWP~va~~vpE~qLGTaygf~qsIqNLgla~ 403 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFTF----------LSPYTSMTFLGLSYSLL-ACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAF 403 (459)
T ss_pred HHHHHHHHHHhhhHHhhh----------ccHHHHHHHHhhhHHHH-HHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhH
Confidence 655444433 33333321 11223334444444321 1224456777889999999999999999999999
Q ss_pred HHHhhHHHHHhhc-cc---cchhhhhHHHHHHHHhhheecc
Q 009099 489 IGLYFLSVVNKFG-IS---TVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 489 ~~~~~g~~~~~~g-~~---~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
.|++.|.+.|+.| |. ..|++...+.++...+++..-+
T Consensus 404 i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 404 IPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred HhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheec
Confidence 9999999999776 33 3345555555555555554433
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=2.3e-20 Score=183.20 Aligned_cols=362 Identities=16% Similarity=0.108 Sum_probs=206.7
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-cccchhhhhhHHHHHHHHHHHHhh-hHHHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAAGAFLCATAQ-SVQTMIIGRVL 203 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l 203 (543)
...++.+++|.++.+. +.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++++..+ +...++++..+
T Consensus 32 L~~yL~~~lgls~~~a--~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~l 109 (493)
T PRK15462 32 LILYLTNQLKYDDNHA--YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAI 109 (493)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Confidence 4446677899999888 9999999999999999999999999 999999999999999988776543 22334444555
Q ss_pred HhhhccccccchhhhhhccCCcc--cchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 204 AGIGIGISSAIVPLYISEISPTE--IRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
.++|.|...+...++++|.+|++ +|..++++.+.+.++|..++|.+.+++.+. .||++.|.+.++..++..+..++.
T Consensus 110 i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-~Gw~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 110 IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-YSWAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh-hChHHHHHHHHHHHHHHHHHHHHh
Confidence 55667777787889999999875 689999999999999999999999999765 799999998766444433333221
Q ss_pred CCChhHH-HhcCChHHHHHHHHHH-------------hCchhhH-HHHHH------------HHHhccCCCCcccchhhh
Q 009099 282 PESPRWL-FQQGKKSEAEKSIQTL-------------YGKERVS-EVMLD------------LTNAGQGSAEPEAGWFDL 334 (543)
Q Consensus 282 ~e~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~-~~~~~------------~~~~~~~~~~~~~~~~~l 334 (543)
.+..... ..++++.+.++..... ....... ..... .......+ .+-.|
T Consensus 189 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~e- 263 (493)
T PRK15462 189 NRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA----ENQKQ- 263 (493)
T ss_pred hhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCHHH-
Confidence 1110000 0000000000000000 0000000 00000 00000000 00000
Q ss_pred hccc--hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH--cCCCc-hhHHHHHHHHHHHHHHHHHHHhhhccCC--hh-
Q 009099 335 FSSR--YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS--VGIES-DVAASALVGAANVFGTAVASSLMDRQGR--KN- 406 (543)
Q Consensus 335 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~--~~- 406 (543)
|+| ....+.+...+++..+....+.+..|.....+. .|++- ......+..+..++..++.+++-.|..+ |.
T Consensus 264 -r~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~ 342 (493)
T PRK15462 264 -RKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTV 342 (493)
T ss_pred -HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 111 111122222222222222233333333222111 13221 2223445555555556655555444422 21
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHH
Q 009099 407 ----LLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMH 482 (543)
Q Consensus 407 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 482 (543)
=..++.++.+++++.+.+.............++++...++.........|+..+.++++.|++.+|..+|+.....
T Consensus 343 s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~ 422 (493)
T PRK15462 343 RIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLS 422 (493)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 2556777777887777654432221111233344444444455556788899889999999999999999986633
Q ss_pred -HHHHHHHHHhhHHH
Q 009099 483 -WISNFVIGLYFLSV 496 (543)
Q Consensus 483 -~~g~~~~~~~~g~~ 496 (543)
.+|..++..+.+..
T Consensus 423 ~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 423 GAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHh
Confidence 56666655555443
No 104
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=1.6e-20 Score=174.00 Aligned_cols=400 Identities=14% Similarity=0.069 Sum_probs=273.7
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhh
Q 009099 96 KKSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ 175 (543)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~ 175 (543)
.+..+++|.++...++..+.+++.+-.++++..+....|| +.+.. -|+.-+|++.+....+++-|+.|++|-|..++
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~--~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l 113 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAA--DWLSMIYMVVSVPFGFAAMWILDKFGLRTALL 113 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHH--HHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence 3456677888888899999999988888888889999999 55555 79999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHh------hhHH--HHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHH
Q 009099 176 LDAVPLAAGAFLCATA------QSVQ--TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (543)
Q Consensus 176 ~~~~~~~i~~~~~~~~------~~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 247 (543)
++..+.++|+.+-..+ +.++ ....+..+.+.+.-.....-..+..-||+++||..+..+-.++..+|..++.
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 9999999999887665 3455 6677888888888777666678889999999999999999999999999888
Q ss_pred HhhcccCCCC-----CchHH--HHHHhHHHHHHHHHH-hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHH
Q 009099 248 VAGLPLAGNP-----LWWRT--MFGLAAIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTN 319 (543)
Q Consensus 248 ~~~~~l~~~~-----~~wr~--~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (543)
++...+..+. ..|-. .|+..+.+..+.+++ .+..++.|+... ....... +
T Consensus 194 llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPp---s~s~~~~--~----------------- 251 (480)
T KOG2563|consen 194 LLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPP---SASQAAL--Q----------------- 251 (480)
T ss_pred hccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC---chhHhhh--h-----------------
Confidence 8887776542 34554 344444444333332 222333332100 0000000 0
Q ss_pred hccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCC--chhHHHHHHHHHHHHHHHHHHH
Q 009099 320 AGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIE--SDVAASALVGAANVFGTAVASS 397 (543)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~ 397 (543)
+.+-..+.++.++++.+....+++...... ++.+...+...+...+++ ..+.......++++++.++.|.
T Consensus 252 ----~~~f~~si~~~~~n~~F~il~~~ygi~~g~----F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gi 323 (480)
T KOG2563|consen 252 ----DASFPKSIKSCFKNRQFIILAICYGIGLGL----FNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGI 323 (480)
T ss_pred ----cCcHHHHHHHHHcCccHHHHHHHHhhhHHH----HHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHh
Confidence 011233456788888887766666655543 444444444334445555 4455677778899999999999
Q ss_pred hhhccCChh-HHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHH
Q 009099 398 LMDRQGRKN-LLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVA 476 (543)
Q Consensus 398 l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 476 (543)
+.||.++-+ ..++......++...+..... .... .+.+.......+.+..+..|+..-+..|..-|..-++..|
T Consensus 324 i~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~----~~~~-~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsG 398 (480)
T KOG2563|consen 324 IADKTKKFKLTTLVLYLFALVGTLMLLTCTL----FLGD-SVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSG 398 (480)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCc-eEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccce
Confidence 999988744 444444444444222221111 1112 2223333334444556678888888888866666888999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhc----cccchhhhhHHHHHHHHhhheecccCCCCCHH
Q 009099 477 LSLGMHWISNFVIGLYFLSVVNKFG----ISTVYLGFATVCLLAVLYIAVNVVETKGRSLE 533 (543)
Q Consensus 477 ~~~~~~~~g~~~~~~~~g~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (543)
+.+..+++.+++-..+.+...+..+ +...-+.....+++..++..+++++.++++.|
T Consensus 399 ll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 399 LLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred eEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 9999999999999999999888776 44445555666666666666666655555444
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.88 E-value=2.9e-21 Score=192.54 Aligned_cols=380 Identities=14% Similarity=0.063 Sum_probs=237.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhc-----ccchhhhhhHHHH-H
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG-----RTRTFQLDAVPLA-A 183 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~~~~~~~~~~-i 183 (543)
....+..+..........+.+.+++|++.+++ +...+...+...+-.+ +|+++||++ ||+.++++.++.+ +
T Consensus 32 ~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i--~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~ 108 (468)
T TIGR00788 32 LQVLFVKGIAGLMRLPLSPMLTDDLGLDGARY--QRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAI 108 (468)
T ss_pred HHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHH
Confidence 33445555553344457778888899999999 9999999999999665 999999998 7777787777763 4
Q ss_pred HHHHHHHhhhHHHHH-HHHHHHhhhccccccchhhhhhccCCcccchhhhH---HHHHHHHHHHHHHHHhhcccCCCCCc
Q 009099 184 GAFLCATAQSVQTMI-IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGS---VNQLFICVGILAALVAGLPLAGNPLW 259 (543)
Q Consensus 184 ~~~~~~~~~~~~~l~-~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~~~~G~~~~~~~~~~l~~~~~~ 259 (543)
+....+..++...+. +.+++.+++.+...++.-+++.|..+ +++....+ +......+|.++++.+++.+.+. .+
T Consensus 109 ~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~-~~ 186 (468)
T TIGR00788 109 LYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK-TL 186 (468)
T ss_pred HHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 433344445544444 47899999999999999999999998 55544333 33344458999999999988765 78
Q ss_pred hHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccch
Q 009099 260 WRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRY 339 (543)
Q Consensus 260 wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (543)
||..|++.+++.++..+..++++|++.....+.++++.... ... .. ...+ .. .+.....++.++++.
T Consensus 187 ~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~-~~~-~~-~~~~---~~-------~~~~~~l~~~l~~~~ 253 (468)
T TIGR00788 187 TRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM-ALL-TL-GVLA---NV-------KVQILGLRGAIQLLE 253 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh-hhh-hh-hHHH---HH-------HHHHHHHHHHHhcHH
Confidence 99999999888877766666677753100001000000000 000 00 0000 00 000112233455555
Q ss_pred hHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHH
Q 009099 340 WKVVSVGAAL-FLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMA 416 (543)
Q Consensus 340 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 416 (543)
.+...+..++ +... ... ....|. ...+..|.++... .....+++.+++..+.+++.+|++.|+.+.++.++.+
T Consensus 254 i~~~l~fifl~~~~~--~~~-~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~ 329 (468)
T TIGR00788 254 IAKPLIFIFLSYANL--PGA-SGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYT 329 (468)
T ss_pred HHHHHHHHHHHHhhc--CCC-CceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 5543333333 1111 111 111111 1112456665533 5666778999999999999999999999988888777
Q ss_pred HHHHHHHHHH-hhcccc-cccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhH
Q 009099 417 ASMLLLSLSF-TWKVLA-PYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFL 494 (543)
Q Consensus 417 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 494 (543)
++.+...... .+.... ....+.......+...+++....+. ..++.+..|++.+|+..++.+.+.++|..+++.+.|
T Consensus 330 ~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 330 LSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred HHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 7665432111 110000 0011222333344444444444444 447889999999999999999999999999999999
Q ss_pred HHHHhhc-----cccchhhhhHH
Q 009099 495 SVVNKFG-----ISTVYLGFATV 512 (543)
Q Consensus 495 ~~~~~~g-----~~~~~~~~~~~ 512 (543)
.+.+..| ++..+....+.
T Consensus 409 ~l~~~~g~~~~~~~~~~~~i~i~ 431 (468)
T TIGR00788 409 LLMETIGITCDNSNNLWLLILGH 431 (468)
T ss_pred HHHHHcCCCcccccchHHHHHHH
Confidence 9999888 66655544433
No 106
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.87 E-value=6.4e-21 Score=180.31 Aligned_cols=374 Identities=16% Similarity=0.115 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHhhhhHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH--HHH-HH
Q 009099 112 GAILFGYHLGVVNGALEYLA-KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA--AGA-FL 187 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~--i~~-~~ 187 (543)
..+...+..+...|..+... ++.|++.+++ |.+.++..+...+.+|+.|.++||+|.||-++..+.+.. .+. +.
T Consensus 15 ~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~i--G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~ 92 (412)
T PF01306_consen 15 FYFFYFFIWGIFLPFFPIWLTQVAGLSGTEI--GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI 92 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccccCCCHHHH--HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 33444445666666666555 4589999999 999999999999999999999999997775544333222 122 22
Q ss_pred HHHhh----hHH-HHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 188 CATAQ----SVQ-TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 188 ~~~~~----~~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
..+.+ |++ ..+++-+..|+......++.-+++.++.. +.+.=.|-.-++.++|.+++..++|.+.+ .+-+.
T Consensus 93 ~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~~G~L~~--i~p~~ 168 (412)
T PF01306_consen 93 YVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLLAGILFN--INPNI 168 (412)
T ss_dssp HTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHHhheeee--eCccH
Confidence 22222 222 22222233333333334444444444332 23566777788889999999999888864 45567
Q ss_pred HHHHhHHHHHHHHHHhccc-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhH
Q 009099 263 MFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (543)
.||+..+.+++..++.++. |+.++.....+.....++ +.+..+..+++|.+++|
T Consensus 169 ~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~l~k~~~fw 223 (412)
T PF01306_consen 169 IFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKD-------------------------KVSLKDVLSLFKMRNFW 223 (412)
T ss_dssp HHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-------------------------------HHHHHHHTTSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCC-------------------------CCcHHHHHHHhcchhHH
Confidence 7887766665554444443 443321111110000000 00011235678888888
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCc----h--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIES----D--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGM 415 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 415 (543)
.+.+........ +.......+.++..+-.+. . +.....-.+..++.-.+.+++.+|+|.|+.++++..++
T Consensus 224 ~~~l~v~g~~~~----Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~ 299 (412)
T PF01306_consen 224 FFVLFVIGVAAI----YDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIM 299 (412)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHH
Confidence 766554444333 3333333344444332222 1 22444455677788889999999999999999999988
Q ss_pred HHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHH-HHHHHHHHHHHHHhhH
Q 009099 416 AASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALS-LGMHWISNFVIGLYFL 494 (543)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~~~~~~~g 494 (543)
.+=..+.++.. +.+.....-.+-+.-+.....+..- |+++.+|++..++...+. +...+++.++.+.+.|
T Consensus 300 ~iRi~~~~~~~--------~~~~i~~~klLH~~e~~l~lva~fk-YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G 370 (412)
T PF01306_consen 300 AIRIIGSGFAT--------NPWVISLIKLLHALEFPLLLVAAFK-YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAG 370 (412)
T ss_dssp HHHHHHHHT----------SHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhc--------chHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 88888877641 2344444455555555444444444 889999999989998885 6788999999999999
Q ss_pred HHHHhhccccchhhhhHHHHHHHHhhheecccCCC
Q 009099 495 SVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKG 529 (543)
Q Consensus 495 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (543)
.++|+.|++.+|++++++.++..++..+.+++.++
T Consensus 371 ~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 371 YLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred hhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 99999999999999998888777777766665544
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.87 E-value=3.5e-20 Score=186.22 Aligned_cols=353 Identities=13% Similarity=0.065 Sum_probs=217.3
Q ss_pred HHHHHHHHHhhh-hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhh----hhcc-cchhhhhhHHHHHHHHH
Q 009099 114 ILFGYHLGVVNG-ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGR-TRTFQLDAVPLAAGAFL 187 (543)
Q Consensus 114 ~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Gr-r~~~~~~~~~~~i~~~~ 187 (543)
+...+....+.+ +..++.+.+|++...+ |.+..+.-+.-++..|+.|.++| |+|| |+.++++.+..+++.++
T Consensus 16 ~~~~~~~~~~~~~l~~yyt~v~Gls~~~v--g~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~l 93 (473)
T PRK10429 16 FGKDFAIGIVYMYLMYYYTDVVGLSVGLV--GTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFL 93 (473)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHH
Confidence 333333333333 5566777789999888 99999999999999999999999 6698 55666787777777666
Q ss_pred HHHhh------hHHHHHHHHHHHhhhccccccchhhhhhccC-CcccchhhhHHHHHHHHHHHHHHHHhhcc----cC--
Q 009099 188 CATAQ------SVQTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLP----LA-- 254 (543)
Q Consensus 188 ~~~~~------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~----l~-- 254 (543)
+...+ .+..+++..++.+++......+..++..|.. +++||.+..++-..+.++|..+.+.+... +.
T Consensus 94 lf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~ 173 (473)
T PRK10429 94 LFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGG 173 (473)
T ss_pred HHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 64433 2345666677778888888888889999998 58999998888666666664444333322 11
Q ss_pred CCCCchHHHHHHhHHHHHHHHHHhc-ccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhh
Q 009099 255 GNPLWWRTMFGLAAIPSILLALGMG-LSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFD 333 (543)
Q Consensus 255 ~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (543)
+...+|+....+.+++.++..+..+ ..+|.+.....+.+ + +++.+-+..++.
T Consensus 174 ~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~--------------------------~~~~~~~~~~~~ 226 (473)
T PRK10429 174 DRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSA-E--------------------------GSHLTLKDIVAL 226 (473)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccc-c--------------------------ccCCCHHHHHHH
Confidence 1224688888777777666444433 34554320000000 0 000011122344
Q ss_pred hhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHH
Q 009099 334 LFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFS 411 (543)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 411 (543)
+++++.++..+...++.... ......+.+++.+....+.. ........++.+++.++.+++.||+|+|+.+..+
T Consensus 227 ~~~n~~~~~ll~~~~~~~~~----~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~ 302 (473)
T PRK10429 227 IYKNDQLSCLLGMALAYNIA----SNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGA 302 (473)
T ss_pred HhcCHHHHHHHHHHHHHHHH----HHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 55676666555544443332 22222233333332221222 1233444577888999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccC-------hhhhhHHHHHHHHHHHH
Q 009099 412 FTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFA-------SRIRAKAVALSLGMHWI 484 (543)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~ 484 (543)
..+.+++.+.+...... .+...+..++...+.+.+.+. ......++++|..+ .+..|..+|....+..+
T Consensus 303 ~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~l~g~~~~~-~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~ 378 (473)
T PRK10429 303 SIFPVLSCGVLLLMGLA---APHNALLIVIAGILLNIGTAL-FWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG 378 (473)
T ss_pred HHHHHHHHHHHHHHhcc---CchhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH
Confidence 77666555444332111 111222333333333333332 33445557777754 44457799999999999
Q ss_pred HHHHHHHhhHHHHHhhccc
Q 009099 485 SNFVIGLYFLSVVNKFGIS 503 (543)
Q Consensus 485 g~~~~~~~~g~~~~~~g~~ 503 (543)
+..+++.+.|.+.+..||.
T Consensus 379 ~~al~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 379 GSAFAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 9999999999999988873
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.86 E-value=2.1e-19 Score=178.73 Aligned_cols=338 Identities=19% Similarity=0.154 Sum_probs=243.8
Q ss_pred hhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhh----hhcccch-hhhhhHHHHHHHHHHHHh-h------
Q 009099 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGRTRT-FQLDAVPLAAGAFLCATA-Q------ 192 (543)
Q Consensus 125 ~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~-~~~~~~~~~i~~~~~~~~-~------ 192 (543)
...+++.+.+|+++... |.+..+.-+-.++..|+.|.++| |+||||. ++++.+..+++.+++... +
T Consensus 23 ~~~~f~~~~~gl~~~~~--g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALA--GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 36677888889999888 99999999999999999999999 8997665 456778888888777765 4
Q ss_pred -hHHHHHHHHHHHhhhccccccchhhhhhccCC-cccchhhhHHHHHHHHHHHHHHHHhhcccCC----CC-C-chHHHH
Q 009099 193 -SVQTMIIGRVLAGIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGLPLAG----NP-L-WWRTMF 264 (543)
Q Consensus 193 -~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~----~~-~-~wr~~f 264 (543)
....+.+..++..++......+..++..|..+ ++||.+..+.-..+..+|.++...+...+.+ .. . +|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 23446777777799999888899999999998 5789999999888888888655555554432 11 1 799999
Q ss_pred HHhHHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHH
Q 009099 265 GLAAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVV 343 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 343 (543)
++.+++.++..+...+ .+|.++. .++ ++++.+-+..++++++++.++..
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke~~~~------~~~------------------------~~~~~~~~~~~~~~~~nr~~~~l 230 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKERSVE------VTE------------------------QEKKISLRDSLRSLFRNRPFRIL 230 (428)
T ss_pred HHHHHHHHHHhhhhhheeeecccc------ccc------------------------cccccccccchhhhcccchHHHH
Confidence 9998888776655444 4551110 000 01111234456788888888887
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHH
Q 009099 344 SVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLS 423 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 423 (543)
.+...+..+..........+|..+..+.. +..........++.+++.++.++++||+|+|+.+..+..+.+++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~--~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 308 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNE--GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLF 308 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHH
Confidence 77766665554444444455554443322 2223355566788899999999999999999999999999888888776
Q ss_pred HHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccC-------hhhhhHHHHHHHHHHHHHHHHHHHhhHHH
Q 009099 424 LSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFA-------SRIRAKAVALSLGMHWISNFVIGLYFLSV 496 (543)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 496 (543)
+... .+.+...+...+.+.+.+. .....+++.+|..+ ++..|..+|+.+....++..+++.+.+.+
T Consensus 309 ~~~~------~~~~~~~i~~~l~gi~~~~-~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 309 FLGP------GSPWLVLILFILAGIGYGA-FFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHh------hhHHHHHHHHHHhHhhhcc-cccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 6521 1334445555555555543 34566668888875 34469999999999999999999999999
Q ss_pred HHhhccc
Q 009099 497 VNKFGIS 503 (543)
Q Consensus 497 ~~~~g~~ 503 (543)
.+..|+.
T Consensus 382 l~~~Gy~ 388 (428)
T PF13347_consen 382 LALVGYD 388 (428)
T ss_pred HHHhCcC
Confidence 9888764
No 109
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.86 E-value=1.5e-18 Score=171.13 Aligned_cols=352 Identities=16% Similarity=0.101 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhcccchhh-hhhHHHHHHHHHHHHh--hhHHHHHHHHHHHhhhccccccchhhhh
Q 009099 143 QGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ-LDAVPLAAGAFLCATA--QSVQTMIIGRVLAGIGIGISSAIVPLYI 219 (543)
Q Consensus 143 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i 219 (543)
.++..++..+..++..|+.|.++|+-|+||.++ +..++..+++.+..+. .+++...+..++.-++.+.......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478888999999999999999999999766554 4555555566666664 3455555555666667777788888999
Q ss_pred hccCCcccc--------------------------hhhhHHHHHHHHHHHHHHHHhhcccCCC-------CCchHHHHHH
Q 009099 220 SEISPTEIR--------------------------GALGSVNQLFICVGILAALVAGLPLAGN-------PLWWRTMFGL 266 (543)
Q Consensus 220 ~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~~~~~~~~l~~~-------~~~wr~~f~~ 266 (543)
.|..+++++ ++..+.-.....+|.++..++...+... ...-|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999998888 8888888887878877666554433211 2346888888
Q ss_pred hHHHHHHHHH-HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 267 AAIPSILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 267 ~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
.++.-++..+ .++++||.|+....++.........+++ ..+++++.|.+.....++
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l-----------------------~~t~k~~~~~~~~~~fLi 288 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRL-----------------------WRTFKEIRKLRQLFLFLI 288 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHH-----------------------HHHHHHHHhChHHHHHHH
Confidence 8888766555 4555677664211111111112222221 122344444555555444
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCCh--hHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRK--NLLTFSFTGMAASML 420 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~ 420 (543)
+.+++.- +...+......+. +.++++.... ......+.+++|.++.|++.||+|.| +++..+..+..+..+
T Consensus 289 a~~l~~d----g~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 289 AYFLYSD----GVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 4443332 2333333333333 4688887765 55667889999999999999999998 777666655533332
Q ss_pred HHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 009099 421 LLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF 500 (543)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 500 (543)
.-.+..........+.+...+..++++.+ ..+..+..-++.+++.|+++.+..+|++...+...+.+||.+.|.+.+.+
T Consensus 365 ~g~~G~~~~~~g~~~~~~f~~~a~~~G~~-~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t 443 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWEFWVLAVLIGLF-MGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT 443 (477)
T ss_pred HHHHHhhhcccCcccHHHHHHHHHHHHHH-hhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22221111111112223333333333333 33456777789999999999999999999999999999999999999998
Q ss_pred c-cccchhhhhHHHHHHHHhhhe
Q 009099 501 G-ISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 501 g-~~~~~~~~~~~~~~~~~~~~~ 522 (543)
| .+..+....++.+++.++.+.
T Consensus 444 g~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 444 GSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred CCchhHHHHHHHHHHHHHHHHhh
Confidence 8 677787777777777766543
No 110
>PRK11462 putative transporter; Provisional
Probab=99.83 E-value=3.3e-18 Score=170.64 Aligned_cols=333 Identities=15% Similarity=0.153 Sum_probs=211.1
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh----hcccch-hhhhhHHHHHHHHHHHHhhh------H
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGRTRT-FQLDAVPLAAGAFLCATAQS------V 194 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr~~-~~~~~~~~~i~~~~~~~~~~------~ 194 (543)
+..++.+.+|++.... |.+..+.-+--++..|+.|.++|| +||||. ++++.+..+++.+++...++ .
T Consensus 32 l~~fyt~~~Gl~~~~~--g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 32 MMFFYTDIFGIPAGFV--GTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHHhhCCCHHHH--HHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 5566778889999888 999999999999999999999995 798654 45676778887776655543 4
Q ss_pred HHHHHHHHHHhhhccccccchhhhhhccCC-cccchhhhHHHHHHHHHHHHHHHHhhcccCC------CCCchHHHHHHh
Q 009099 195 QTMIIGRVLAGIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGLPLAG------NPLWWRTMFGLA 267 (543)
Q Consensus 195 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~------~~~~wr~~f~~~ 267 (543)
..+.+..++..++......+-.++..|..+ ++||.+..++...+..+|..+++.+...+.. ...+|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 456667777788888888888889999887 7889999999999988887776655433221 124688887777
Q ss_pred HHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHH
Q 009099 268 AIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVG 346 (543)
Q Consensus 268 ~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 346 (543)
+++.+++.+..++ .+|.++. ++++. .-+..++.+++++.++.+...
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~~---~~~~~------------------------------~~~~~l~~~~~Nk~~~~l~~~ 236 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVEA---PPTTT------------------------------SMREDLRDIWQNDQWRIVGLL 236 (460)
T ss_pred HHHHHHHHHHHHhcceeccCC---CccCC------------------------------CHHHHHHHHhCChHHHHHHHH
Confidence 7776665544433 3443210 00000 011123456677777666544
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCCCch-hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHH
Q 009099 347 AALFLFQQLAGINAVVYYSTSVFRSVGIESD-VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLS 425 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 425 (543)
..+.............+|..++. +.... ........++.+++.++++++.||+++|+....+..+..+..+++.+.
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~y~~---g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 237 TIFNILAVCVRGGAMMYYVTWIL---GTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred HHHHHHHHHHHHhHhhhhhhhhc---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 44444433333334444444432 22222 224455667888899999999999999988765544433333322221
Q ss_pred HhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccC-------hhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 426 FTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFA-------SRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
+........+..++.+.+. ....+..+.+..|..+ .+..|...+.......+|..+++.+.|.+.+
T Consensus 314 ------~~~~~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 314 ------PMQASITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred ------chhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111112222223333332 2233444556666654 3334666677778999999999999999998
Q ss_pred hhccc
Q 009099 499 KFGIS 503 (543)
Q Consensus 499 ~~g~~ 503 (543)
..||.
T Consensus 387 ~~Gy~ 391 (460)
T PRK11462 387 YGGYD 391 (460)
T ss_pred HcCCC
Confidence 87763
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.82 E-value=4.2e-18 Score=170.51 Aligned_cols=332 Identities=14% Similarity=0.095 Sum_probs=199.7
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh----cccchh-hhhhHHHHHHHHHHHHhh-------h
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF----GRTRTF-QLDAVPLAAGAFLCATAQ-------S 193 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~----Grr~~~-~~~~~~~~i~~~~~~~~~-------~ 193 (543)
+.+++.+.+|++..+. |.+.++..+..++..+++|+++||. |||+.. +.+.+...+..++....+ .
T Consensus 31 l~~y~~~~~gl~~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (448)
T PRK09848 31 LLSYYTDVAGVGAAAA--GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSK 108 (448)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchH
Confidence 4567888889999888 9999999999999999999999996 767644 556555554444432111 2
Q ss_pred HHHHHHHHHHHhhhccccccchhhhhhccCC-cccchhhhHHHHHH-----HHHHHHHHHHhhcccCCC-CCchHHHHHH
Q 009099 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISP-TEIRGALGSVNQLF-----ICVGILAALVAGLPLAGN-PLWWRTMFGL 266 (543)
Q Consensus 194 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~G~~~~~~~~~~l~~~-~~~wr~~f~~ 266 (543)
.+.+++..++.+++.+...++..++..+... +++|.+..++-..+ ..+|..++|+++...... ..+|.....+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~ 188 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIV 188 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 2334555677788888888777777776654 46788776655443 335566666666543211 0122222223
Q ss_pred hHHHHHHHHH-HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 267 AAIPSILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 267 ~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
.+++.++..+ .....+|+++. +.++ +.-+..++++++++.+....+
T Consensus 189 ~~v~~~~~~~~~~~~~~e~~~~---~~~~------------------------------~~~~~~~~~l~~n~~f~~~~~ 235 (448)
T PRK09848 189 LAIAGMVLYFICFKSTRENVVR---IVAQ------------------------------PSLKISLQTLKRNRPLFMLCI 235 (448)
T ss_pred HHHHHHHHHHHHHcCcEeccCC---CccC------------------------------CCHHHHHHHHhCCchHHHHHH
Confidence 3333333222 22233554220 0000 001123456788888776665
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHH-cCCCchhH-H-HHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYSTSVFRS-VGIESDVA-A-SALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLL 422 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 422 (543)
..++..... .......+++.++ .+.+.... . .....++.+++.++.+++.||+++|+.+..+..+.+++.+.+
T Consensus 236 ~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~ 311 (448)
T PRK09848 236 GALCVLIST----FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLF 311 (448)
T ss_pred HHHHHHHHH----HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 555444432 2223334433332 34433322 2 222245677788999999999999999999888777776665
Q ss_pred HHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChh-------hhhHHHHHHHHHHHHHHHHHHHhhHH
Q 009099 423 SLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASR-------IRAKAVALSLGMHWISNFVIGLYFLS 495 (543)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~g~~~~~~~~g~ 495 (543)
.+. +..+.+.......+.+.+.+.. .+...++..|..|.+ ..|...|+.+....+|..+++.+.+.
T Consensus 312 ~~~------~~~~~~~~~~~~~l~g~G~~~~-~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 312 FWV------SVWSLPVALVALAIASIGQGVT-MTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHc------CchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432 1112222333334444444332 344455666776543 45999999999999999999999999
Q ss_pred HHHhhccc
Q 009099 496 VVNKFGIS 503 (543)
Q Consensus 496 ~~~~~g~~ 503 (543)
+.+..||.
T Consensus 385 ~l~~~G~~ 392 (448)
T PRK09848 385 ILGLSGYI 392 (448)
T ss_pred HHHHcCCC
Confidence 99887763
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.82 E-value=2.2e-18 Score=162.26 Aligned_cols=275 Identities=15% Similarity=0.106 Sum_probs=184.3
Q ss_pred HHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCC-----------
Q 009099 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP----------- 257 (543)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~----------- 257 (543)
+...+|+.++++-++.|.|.+...+.++.++++..+++++.+.+++.+..+++|.+++|++++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 456789999999999999999999999999999999999999999999999999999999998765211
Q ss_pred ----CchHHHHHHhHHHHHHHHHHhccc--CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccch
Q 009099 258 ----LWWRTMFGLAAIPSILLALGMGLS--PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGW 331 (543)
Q Consensus 258 ----~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (543)
..|+++|++.+++.++..+.+.+. ||.++ + +.++..+ ++....
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~----~-~~~~~~~--------------------------~~~~~~ 133 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE----A-DVARVSS--------------------------GDTTQK 133 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc----c-ccccccc--------------------------ccccch
Confidence 369999997777665555444443 44321 0 0000000 000011
Q ss_pred hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH---cCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChh
Q 009099 332 FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS---VGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKN 406 (543)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~ 406 (543)
+++++++..+...+..+++... ......|.+.++.+ .+.++... .......+.++|+++++++.||+++|+
T Consensus 134 ~~~~~~~~~~l~~~~~f~yvg~----e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~ 209 (310)
T TIGR01272 134 TSAFQFTHLVLGALGIFVYVGA----EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR 209 (310)
T ss_pred hhHHhhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 2344455555444444444433 44445555555543 36655433 566677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHH
Q 009099 407 LLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISN 486 (543)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 486 (543)
.+..+..+.+++.+++... +.........+++.+.+ ...|...+...+..|++ .+++.++. ....+|+
T Consensus 210 ~l~~~~~l~~~~~~l~~~~---------~~~~~~~~~~l~g~~~s-~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg 277 (310)
T TIGR01272 210 YLAFNAFLAVLLSIGAALT---------HGYVAMWFVLALGLFNS-IMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGG 277 (310)
T ss_pred HHHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcc
Confidence 8887776666665444321 11222233334443333 34555555666777754 66777775 6788999
Q ss_pred HHHHHhhHHHHHhhccccchhhhh
Q 009099 487 FVIGLYFLSVVNKFGISTVYLGFA 510 (543)
Q Consensus 487 ~~~~~~~g~~~~~~g~~~~~~~~~ 510 (543)
++.|.+.|.+.|..|.+..+++..
T Consensus 278 ~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 278 AIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred hHHHHHHHHHHHhccchHHHHHHH
Confidence 999999999999999877776433
No 113
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.80 E-value=3.8e-17 Score=154.64 Aligned_cols=397 Identities=17% Similarity=0.119 Sum_probs=247.8
Q ss_pred hhhHHHHHHHcC----CCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-cccchhhhhhHHHHHHHHHHHHhh--hHHH
Q 009099 124 NGALEYLAKDLG----IAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAAGAFLCATAQ--SVQT 196 (543)
Q Consensus 124 ~~~~~~i~~~~~----~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~--~~~~ 196 (543)
.++.-++..+++ .++++. .-+.++|..-.-+..+++|+++||+ |+|+.++.|.++..+|.++.+... +...
T Consensus 42 aiL~~Yl~~~~~~gLg~~~~~A--~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~g 119 (498)
T COG3104 42 AILILYLYYQLGDGLGFDETHA--TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGG 119 (498)
T ss_pred HHHHHHHHHhccccCCcChHhh--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccH
Confidence 446667777777 888877 7778888777778899999999996 999999999999999999999884 7889
Q ss_pred HHHHHHHHhhhccccccchhhhhhccCCccc--chhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHH
Q 009099 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEI--RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (543)
Q Consensus 197 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 274 (543)
++++-++.++|.|..-+....+++|.+|+++ |-..++++.++.++|.+++|++.+++.++ .||...|.+.++-..+.
T Consensus 120 l~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~-~g~~~gF~~aavGm~~g 198 (498)
T COG3104 120 LYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN-YGWHVGFGLAAVGMIIG 198 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998643 57889999999999999999999999877 89999998888777666
Q ss_pred HHHhcccCCC---------hhHHHhcCChHHHHHHHHHH--------hCchhhHHHHHHH----HH--hccCCCCcccch
Q 009099 275 ALGMGLSPES---------PRWLFQQGKKSEAEKSIQTL--------YGKERVSEVMLDL----TN--AGQGSAEPEAGW 331 (543)
Q Consensus 275 ~~~~~~~~e~---------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~----~~--~~~~~~~~~~~~ 331 (543)
++..++.+.. +..+..+............. ...+..+...... .. -.+..+.++..
T Consensus 199 l~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~- 277 (498)
T COG3104 199 LVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF- 277 (498)
T ss_pred HHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-
Confidence 5555443321 11110000000000000000 0000000000000 00 00000001100
Q ss_pred hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc--CCCch-hHHHHHHHHHHHHHHHHHHHhhhccCCh---
Q 009099 332 FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSV--GIESD-VAASALVGAANVFGTAVASSLMDRQGRK--- 405 (543)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~--- 405 (543)
.+.-|-.....+++...+++..+-...+.+..|.....+.. |++-. .....+..+.-++..++..++..+.+++
T Consensus 278 ~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ 357 (498)
T COG3104 278 DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQ 357 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCC
Confidence 11111122233344444444444445555666655544322 22222 2234444555556666666655553322
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHH
Q 009099 406 ----NLLTFSFTGMAASMLLLSLSFTWKVL-APYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLG 480 (543)
Q Consensus 406 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 480 (543)
.-+.++..++..+++++.....+... ....+.++++...++.........|+...++....|+...+..+++...
T Consensus 358 ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfL 437 (498)
T COG3104 358 PSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFL 437 (498)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 22445566666666666655333322 2223344555555555555667788888899999999999999999998
Q ss_pred HHHHHHHHHHHhhHH------HHHhhccccchhhhhHHHHHHHHhhheec
Q 009099 481 MHWISNFVIGLYFLS------VVNKFGISTVYLGFATVCLLAVLYIAVNV 524 (543)
Q Consensus 481 ~~~~g~~~~~~~~g~------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 524 (543)
....+..++..+.+. ..+.......|+.++...++..++.....
T Consensus 438 t~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 438 TVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred HHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 888888888777763 33445556677777777666655544433
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=9.1e-17 Score=148.58 Aligned_cols=353 Identities=15% Similarity=0.112 Sum_probs=230.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhh-hhhHHHHHHHHHHHHhhh--HH-HHHHHHHHHhhhccccccc
Q 009099 139 NTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ-LDAVPLAAGAFLCATAQS--VQ-TMIIGRVLAGIGIGISSAI 214 (543)
Q Consensus 139 ~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~~~~--~~-~l~~~r~l~G~~~g~~~~~ 214 (543)
.+...+...++..+..++..|+.|.++|+.|+||... +...+..++..+..++++ ++ ..++...+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 3345689999999999999999999999999766554 445555555666666654 44 4555568888898888899
Q ss_pred hhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhh--cccC---------------CCCCchHHHHHHhHHHHHHHHHH
Q 009099 215 VPLYISEISPTEIRGALGSVNQLFICVGILAALVAG--LPLA---------------GNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 215 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~l~---------------~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
..+++.+..++++-++..++-.....+|..+.-+.. ..+. .....-|..+.+.++.-++..+-
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 999999999998777776665555555544333221 1111 02245788898888888776664
Q ss_pred hcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhh
Q 009099 278 MGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLA 356 (543)
Q Consensus 278 ~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 356 (543)
.++ .++.++- ....++......+++ +.+++++.+.+.....+++..++.-.
T Consensus 216 m~~~v~~~~~~--~~~~~~~l~~g~k~L-----------------------~~t~k~i~~~~~i~~FLiA~~~~~DG--- 267 (438)
T COG2270 216 MILNVHDAEKI--SSPPPTALRNGFKEL-----------------------KSTFKEIRGRKNLVLFLIARFFYIDG--- 267 (438)
T ss_pred HHhcccccccc--cccchHHHHHHHHHH-----------------------HHHHHHHhcccchHHHHHHHHHHHhh---
Confidence 444 4554431 001111222222221 23456666666666666555544332
Q ss_pred hhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 357 GINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 357 ~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
.+.+......+-. .+|++.... ......+.+++|+++.|++.||+|.|+++..+.++..+.++...+..
T Consensus 268 -v~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~------- 339 (438)
T COG2270 268 -VNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE------- 339 (438)
T ss_pred -HHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc-------
Confidence 3333334444433 678887755 45566789999999999999999999998888877777666655431
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcc-ccchhhhhHH
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGI-STVYLGFATV 512 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~-~~~~~~~~~~ 512 (543)
......+..++++.. ..+.....-++..+..|+++.++.+|+++..+.....+||...+.+.+.+|- +..+....++
T Consensus 340 -~~~~f~i~gll~g~s-~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vl 417 (438)
T COG2270 340 -GELDFWILGLLVGTS-LGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVL 417 (438)
T ss_pred -ccHHHHHHHHHHHHh-cchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHH
Confidence 112222222333333 3345667777999999999999999999999999999999999999998873 4445555555
Q ss_pred HHHHHHhhheecccCCCC
Q 009099 513 CLLAVLYIAVNVVETKGR 530 (543)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~ 530 (543)
..++.++ +...|..+++
T Consensus 418 l~iGl~~-L~~v~~~~~~ 434 (438)
T COG2270 418 LLIGLLL-LLRVKVPGRR 434 (438)
T ss_pred HHhhHhh-EEeecCCCCc
Confidence 5555543 4445544443
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.80 E-value=6.4e-17 Score=154.72 Aligned_cols=337 Identities=18% Similarity=0.164 Sum_probs=229.6
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh----hccc-chhhhhhHHHHHHHHHHHHhhh------H
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGRT-RTFQLDAVPLAAGAFLCATAQS------V 194 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~~~~~~~~~~i~~~~~~~~~~------~ 194 (543)
++-++.+.+|++.... |.+..+--+--++..|+.|.++|| +||| +.++.+.+.+++.+.++-.+++ .
T Consensus 35 Ll~fYTdv~Gis~~~a--G~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~ 112 (467)
T COG2211 35 LLFFYTDVFGLSAALA--GTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKL 112 (467)
T ss_pred HHHHHhcccCCcHHHH--HHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcch
Confidence 4456677789998888 999888888899999999999994 7865 5667777999999988888763 4
Q ss_pred HHHHHHHHHHhhhccccccchhhhhhccCC-cccchhhhHHHHHHHHHHHHHHHHhhc----ccCCC--CCchHHHHHHh
Q 009099 195 QTMIIGRVLAGIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGL----PLAGN--PLWWRTMFGLA 267 (543)
Q Consensus 195 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~----~l~~~--~~~wr~~f~~~ 267 (543)
...++...+.+++......+-.++..+..+ ++||.+..++-..+.++|..+...+.. .+.+. ..||+..-++.
T Consensus 113 ~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~ 192 (467)
T COG2211 113 IYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVL 192 (467)
T ss_pred HHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHH
Confidence 556777899999999888888889888876 688999999988888888544333332 22222 46899888888
Q ss_pred HHHHHHHHHHhcc-cCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHH
Q 009099 268 AIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVG 346 (543)
Q Consensus 268 ~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 346 (543)
++++++..+..++ ..|.+.. ....++ ..+.+.+..+..+++|+.+....+.
T Consensus 193 ~vi~~i~~l~~~~~v~ER~~~---~~~~~~-------------------------~~~~~~~~~~~~~~~Nrp~~~~l~~ 244 (467)
T COG2211 193 GVIGVILLLFCFFNVKERVVE---TQPTKT-------------------------GVKLKLKDSFLLIFKNRPLLLLLLM 244 (467)
T ss_pred HHHHHHHHHHHHHHhhcccCc---cccCcc-------------------------cccccHHHHHHHHHccchHHHHHHH
Confidence 8888776665544 3443320 000000 0001112223457788887776664
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHH
Q 009099 347 AALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSL 424 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 424 (543)
..+.............+|..+. +|.+.... .......+.+++.++..++.+|+|+|++...+.++.+++.+++.+
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~y~---lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f 321 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVTYV---LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYF 321 (467)
T ss_pred HHHHHHHHHHHhhhhheeEEEE---cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHh
Confidence 4444443222223333333332 23333322 334445566666899999999999999999999999988888877
Q ss_pred HHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccC-------hhhhhHHHHHHHHHHHHHHHHHHHhhHHHH
Q 009099 425 SFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFA-------SRIRAKAVALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
.. ..+....++..++.+.+.+ ...++.+++++|..+ .+..|...|.+..+.-+|.+++..+.|++.
T Consensus 322 ~~------~~~~~l~~~~~~i~~~g~~-~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 322 TP------AGSVVLIVVALIIAGVGTG-IANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred hc------CcchHHHHHHHHHHHHHhh-ccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 52 1122333333344334433 456788888888753 555688999999999999999999999999
Q ss_pred Hhhcc
Q 009099 498 NKFGI 502 (543)
Q Consensus 498 ~~~g~ 502 (543)
+..||
T Consensus 395 ~~~Gy 399 (467)
T COG2211 395 GAIGY 399 (467)
T ss_pred HHcCC
Confidence 98875
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.79 E-value=2.4e-18 Score=164.68 Aligned_cols=392 Identities=15% Similarity=0.151 Sum_probs=231.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH--cCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcc-cchhhhhhH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKD--LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR-TRTFQLDAV 179 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~~~~~~~~ 179 (543)
|..+.+..+..++.....+++.+..-...++ .+.+.+.. |++.++..++.+++++.+|+.+.|.+. |+.++.|.+
T Consensus 33 wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ff--G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 33 WRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFF--GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred hHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchh--hHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 4455566667777777777766644344445 45555555 999999999999999999999999997 899999999
Q ss_pred HHHHHHHHH-HHh---h-hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 180 PLAAGAFLC-ATA---Q-SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 180 ~~~i~~~~~-~~~---~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
+..+++++. ++. + ..+.++++|++.|+|.| ......+|+++....++|.++++....+..+|.++||.++..+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 999999988 332 3 67889999999999977 66788899999999999999999999988888888888876554
Q ss_pred CCC-Cc-----------hHHHHHHhHHHHHHHHHHh-cccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhc
Q 009099 255 GNP-LW-----------WRTMFGLAAIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAG 321 (543)
Q Consensus 255 ~~~-~~-----------wr~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (543)
.-. .| +-.+-|+.+++.++.++.. +++.|.++...+++.+++..+ +.+.
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~------------------~~~~ 251 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEE------------------KSDI 251 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhh------------------ccch
Confidence 210 11 2334466677776655443 445665542211111111000 0000
Q ss_pred cCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH---HHHHHHHHHHHHH-HHHHH
Q 009099 322 QGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA---ASALVGAANVFGT-AVASS 397 (543)
Q Consensus 322 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~g~ 397 (543)
+ +.-..+..+...+++....+...+.....-..+.+.....++...... ......+.+++.. +...+
T Consensus 252 ~---------~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~ 322 (488)
T KOG2325|consen 252 E---------KVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLY 322 (488)
T ss_pred h---------hhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHH
Confidence 0 000112333444444444444443333334444444444455544432 2222222222222 22222
Q ss_pred hhh---ccCChhHHHHHHHHHHHHHHHHHHHHhhc--cccc--------------------ccchhHHHHHHHHHHHhhc
Q 009099 398 LMD---RQGRKNLLTFSFTGMAASMLLLSLSFTWK--VLAP--------------------YSGTLAVLGTVLYVLSFSL 452 (543)
Q Consensus 398 l~d---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------------~~~~~~~~~~~~~~~~~~~ 452 (543)
..- ++.+|+.+..++........+........ .... ......+.....+.++.+.
T Consensus 323 ~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~ 402 (488)
T KOG2325|consen 323 IFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAF 402 (488)
T ss_pred HHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheecccc
Confidence 222 33445555554333333333322211100 0000 0011111111111122211
Q ss_pred C-cccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheec
Q 009099 453 G-AGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNV 524 (543)
Q Consensus 453 ~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 524 (543)
- ......++-+|...++.++++.|++......+..++|.+........|+++.+.+.++..++...+...+.
T Consensus 403 P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~ 475 (488)
T KOG2325|consen 403 PFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFL 475 (488)
T ss_pred ccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12223446678888999999999999999999999999999999999998888777766666555444433
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.71 E-value=2.7e-15 Score=149.82 Aligned_cols=305 Identities=15% Similarity=0.173 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHH
Q 009099 104 PFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (543)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 183 (543)
.++.++++..+..++..+.+...+..+.+.|+++.++. |++.+.|-++..+...+..+..-|.-|-+.+-+|++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~s--G~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQS--GLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcc--eeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 34555677778888888888999999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHh--------------------h---------------------------h----HH-HHHHHHHHHhhhcccc
Q 009099 184 GAFLCATA--------------------Q---------------------------S----VQ-TMIIGRVLAGIGIGIS 211 (543)
Q Consensus 184 ~~~~~~~~--------------------~---------------------------~----~~-~l~~~r~l~G~~~g~~ 211 (543)
+++++++- + + .+ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99998762 0 0 12 4677889999999999
Q ss_pred ccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCC------------------CchHHHHHHhHHHHHH
Q 009099 212 SAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP------------------LWWRTMFGLAAIPSIL 273 (543)
Q Consensus 212 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~------------------~~wr~~f~~~~~~~~~ 273 (543)
++....|+-|...+++-+..+|+......+|.++|.++++++...+ .-|..-|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998764210 1277777788888888
Q ss_pred HHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHH
Q 009099 274 LALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQ 353 (543)
Q Consensus 274 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 353 (543)
..+.++++|.+.+...++ +..+..+..+...+..+.+.. ..+..++-....+++++++.+....++..+...
T Consensus 335 ~a~p~f~fPk~lp~~~~~-~~~~~~~~~k~~~~~~~~~~~------~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~- 406 (735)
T KOG3626|consen 335 SAVPLFFFPKELPKSQKR-KRARDLHVLKTESGGAKSDKT------FGKKIKDFPKSIKRLLSNPIFMLVVLASVIESL- 406 (735)
T ss_pred HHHHHHhCcccCcccccc-chhhhhcccccccccccCCcc------hhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHH-
Confidence 888888887664411110 000000000000000000000 000000112345667777766665555444443
Q ss_pred HhhhhHHHHHHHHHHHHH-cCCCchhH--HH-HHHHHHHHHHHHHHHHhhhccCC--hhHHHHHHHHHHHHHHH
Q 009099 354 QLAGINAVVYYSTSVFRS-VGIESDVA--AS-ALVGAANVFGTAVASSLMDRQGR--KNLLTFSFTGMAASMLL 421 (543)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~-~~~~~~~~~~~~~~g~l~d~~g~--~~~~~~~~~~~~~~~~~ 421 (543)
.+.....|+|.+++. +|.++..+ +. .+...+..+|.+++|++.+|+.. |....+..+...+.++.
T Consensus 407 ---~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 407 ---AITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred ---HHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 467777788887765 67766655 22 22334566788999999998753 44444444444433333
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.70 E-value=7.2e-15 Score=136.68 Aligned_cols=330 Identities=16% Similarity=0.080 Sum_probs=216.2
Q ss_pred HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhc-----ccchhhh-hhHHHHHHHHHHHHh-----h------
Q 009099 130 LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG-----RTRTFQL-DAVPLAAGAFLCATA-----Q------ 192 (543)
Q Consensus 130 i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~~~~-~~~~~~i~~~~~~~~-----~------ 192 (543)
|..|++++..-. +.+.++..+.. ...+.+|+.||+.+ ||..+++ |.++...+..+..++ .
T Consensus 6 MIvEL~vpA~lv--~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGVPAWLV--ALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhccHHHHH--HHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 567888887777 88888887764 56999999999999 8876655 555555555554442 2
Q ss_pred --h-HH--HHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHh
Q 009099 193 --S-VQ--TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLA 267 (543)
Q Consensus 193 --~-~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~ 267 (543)
. .+ ...+...+.|+|.+...+...+++.|..++++|+++.++......+|.+++.++.+.+.+....-|..-.+.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~ 162 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQ 162 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 1 12 244556888999999999999999999999999999999999999999999999888776533333333332
Q ss_pred --HHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH
Q 009099 268 --AIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV 345 (543)
Q Consensus 268 --~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (543)
+++.+++.++..+-.|.+.....+. .+++++.-...+++++.++..+++++
T Consensus 163 ~~a~i~~~l~~ia~wg~E~r~~~~~~~---------------------------~~~~~~~f~~a~~~~~~~~~a~~f~~ 215 (403)
T PF03209_consen 163 GVALIALLLNLIALWGQEPRRSRRAAA---------------------------AERPRPPFREAWRQVWASPQARRFFV 215 (403)
T ss_pred HHHHHHHHHHHHHHHhcccCCcccccC---------------------------CCCCCccHHHHHHHHHhCCChhHHHH
Confidence 2223322233333233221100000 00111112234556666777777666
Q ss_pred HHHHHHHHHhhhhHHHHHHH-HHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhh-ccCChhHHHHHHHHHHHHHHH
Q 009099 346 GAALFLFQQLAGINAVVYYS-TSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMD-RQGRKNLLTFSFTGMAASMLL 421 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~ 421 (543)
..++..+.. +.--..+ |+--+-+|++.... ++...+.+.++|..+.|++.. |.++++...++....++++.+
T Consensus 216 fl~l~t~a~----~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l 291 (403)
T PF03209_consen 216 FLFLGTLAF----FMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL 291 (403)
T ss_pred HHHHHHHHH----HhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Confidence 555544432 2222222 22223356666544 777788888899888888777 677888888888888888777
Q ss_pred HHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 422 LSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
+....... +.+......++++.+.+........ .+.+..+++..|..+|.....+.+...++..+.|.+.|.
T Consensus 292 ii~a~~~~-----~~~~~~~~~~l~G~g~G~f~vgals-~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 292 IILAGPLG-----SPWLFRPGVFLLGLGNGLFTVGALS-LMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHhcc-----cchHHHHHHHHHHHhhhHHHHHHHH-HHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76653321 2345555555665555543333333 455777778899999999999999999999999988874
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.67 E-value=8.6e-16 Score=155.39 Aligned_cols=178 Identities=14% Similarity=0.097 Sum_probs=134.9
Q ss_pred hHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHH---HHHhhhHHHHHHHH
Q 009099 126 ALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL---CATAQSVQTMIIGR 201 (543)
Q Consensus 126 ~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~---~~~~~~~~~l~~~r 201 (543)
..|. +.+++|.+..+. ++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+++++
T Consensus 272 ~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 272 YMPSYLSHNLHYSEDHG--VLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 4454 456788887766 78888889999999999999999999999988877654443332 22345677888899
Q ss_pred HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
++.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+...+|+..+++..+++++.++..+++
T Consensus 350 ~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 350 LMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 99998877777777888899999999999999754444555667777777776543468888777777777766677778
Q ss_pred CCChhHHHhc-----CChHHHHHHHHHHh
Q 009099 282 PESPRWLFQQ-----GKKSEAEKSIQTLY 305 (543)
Q Consensus 282 ~e~~~~~~~~-----~~~~~~~~~~~~~~ 305 (543)
||+|+++.++ ++.+++.+.+.+++
T Consensus 430 pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 430 KETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred ccccCCCCCCccccccchhhHHHHhhccc
Confidence 9999987654 66777777777765
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.61 E-value=6e-17 Score=162.07 Aligned_cols=382 Identities=14% Similarity=0.143 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH
Q 009099 109 ACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 188 (543)
+++..+......+.+...+..+.+.|+++..+. |++.+.|-++..+..++..++.+|..|-|.+-+|.++++++++++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~--G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQS--GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 344455556777778889999999999999999 999999999999999999999999888889999999999999887
Q ss_pred HHh----h----------------------------------------------hHHHHHHHHHHHhhhccccccchhhh
Q 009099 189 ATA----Q----------------------------------------------SVQTMIIGRVLAGIGIGISSAIVPLY 218 (543)
Q Consensus 189 ~~~----~----------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~ 218 (543)
++- . -+..+++++++.|+|....++...+|
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 651 0 02447889999999999999999999
Q ss_pred hhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCC---------------------CchHHHHHHhHHHHHHHHHH
Q 009099 219 ISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP---------------------LWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 219 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~~~~~ 277 (543)
+-|..++++-+..+|+..+...+|.++|.++++.+...+ ..|-.-|++.+++.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998765310 11555566666666666666
Q ss_pred hcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHH---HhccCCCCcccchhhhhccchhHHHHHHHHHHHHHH
Q 009099 278 MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLT---NAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQ 354 (543)
Q Consensus 278 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 354 (543)
++++|+.-+...+..+.++..+ ++. ++...+...+.+ ...+..++-....+++++|+.+....++......
T Consensus 246 l~~FPk~lp~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~-- 319 (539)
T PF03137_consen 246 LFFFPKKLPGTSERQEEKESSE--RKE--EDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF-- 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCCccCCCcccccchhhhhh--cch--hhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH--
Confidence 6666655332100000000000 000 000000000000 0001112223456677777776665555544443
Q ss_pred hhhhHHHHHHHHHHHHH-cCCCchhH--H-HHHHHHHHHHHHHHHHHhhhccC--ChhHHHHHHHHHHHHHHHHHHHHh-
Q 009099 355 LAGINAVVYYSTSVFRS-VGIESDVA--A-SALVGAANVFGTAVASSLMDRQG--RKNLLTFSFTGMAASMLLLSLSFT- 427 (543)
Q Consensus 355 ~~~~~~~~~~~~~~~~~-~~~~~~~~--~-~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~~- 427 (543)
....+..|.|.+++. ++.++..+ . ..+...+.++|.+++|++.+|++ .|+.+....+...+..+.+...+.
T Consensus 320 --~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~ 397 (539)
T PF03137_consen 320 --IVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFL 397 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --HHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHee
Confidence 366777777777764 56555433 2 22233467789999999999975 344444444443333332111000
Q ss_pred ----------hccc--------------------------------ccc--cchhHH-HHHHHHHHHhhcCccccccccc
Q 009099 428 ----------WKVL--------------------------------APY--SGTLAV-LGTVLYVLSFSLGAGPVPALLL 462 (543)
Q Consensus 428 ----------~~~~--------------------------------~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 462 (543)
.... ... ...... +..++..+.......|... .+
T Consensus 398 ~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~-i~ 476 (539)
T PF03137_consen 398 GCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTL-IT 476 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchhe-ee
Confidence 0000 000 011112 2222222222233344444 45
Q ss_pred ccccChhhhhHHHHHHHHHHHH-HHHHHHHhhHHHHHhhc
Q 009099 463 PEIFASRIRAKAVALSLGMHWI-SNFVIGLYFLSVVNKFG 501 (543)
Q Consensus 463 ~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~~~~~~g 501 (543)
-..+|+++|+.|.|+...+.++ |.+=+|.++|.+.|..-
T Consensus 477 LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 477 LRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ----------------------------------------
T ss_pred eccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 5788999999999999987765 56779999999999753
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.57 E-value=7.2e-15 Score=121.94 Aligned_cols=134 Identities=25% Similarity=0.316 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcc
Q 009099 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTE 226 (543)
Q Consensus 147 ~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 226 (543)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 227 IRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 227 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
+|++.+++......+|..+++.+.+.+.+. .+|++.|++.++..++..+..+++
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQF-LGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-cchHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999988765 789999999888777665544443
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.56 E-value=3.1e-14 Score=140.62 Aligned_cols=159 Identities=14% Similarity=0.097 Sum_probs=128.7
Q ss_pred hHHHHHHHcCCCc--------chhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh----h
Q 009099 126 ALEYLAKDLGIAE--------NTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ----S 193 (543)
Q Consensus 126 ~~~~i~~~~~~s~--------~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~----~ 193 (543)
..+...++.|.+. +.. +...++..++..++.++.|+++||+|+|+++.++.++.+++..+..... +
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~--g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 230 FGNGFLHEFGRNPEFADSFVVKNA--SIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred hHHHHHHHhcccccccchhhhhhH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 4455455666443 444 8999999999999999999999999999999999999988877666632 3
Q ss_pred HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHH-HHHHHHHHHHHHhhcccCCCC-----CchHHHHHHh
Q 009099 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNP-----LWWRTMFGLA 267 (543)
Q Consensus 194 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~-----~~wr~~f~~~ 267 (543)
++.+++.+++.|++.+...+....++.|++|+++|++++++.+ ...++|..+||+++|.+.+.. .||+..|++.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 4667788999999999888888899999999999999999997 678899999999999887652 4699999988
Q ss_pred HHHHHHHHHHh-cccCCChh
Q 009099 268 AIPSILLALGM-GLSPESPR 286 (543)
Q Consensus 268 ~~~~~~~~~~~-~~~~e~~~ 286 (543)
+++.++..++. ++++|+.+
T Consensus 388 ~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHhCCccc
Confidence 88877655544 44566543
No 123
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.55 E-value=2e-13 Score=134.34 Aligned_cols=154 Identities=18% Similarity=0.162 Sum_probs=127.0
Q ss_pred hHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 009099 126 ALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (543)
Q Consensus 126 ~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 204 (543)
..| ++++++|.+..+. +++.+...++..++.+++|+++||+|||+.+..+.....+......+.++.+.+++.+++.
T Consensus 238 ~~p~~l~~~~~~~~~~~--g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 238 NMPLFIINELHLPEKLA--GVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 344 5667889988877 8888888888888999999999999999988877766666555556678888888899998
Q ss_pred hhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCC
Q 009099 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPE 283 (543)
Q Consensus 205 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 283 (543)
+++.+...+....+..|.+|+ +|++++++++....+|..+++.+++.+.+. .+|+..|++.+++.++..+..++.||
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI-WNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 888877777777888899885 599999999999999999999999998876 78999999888888777766666554
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=1.7e-13 Score=141.65 Aligned_cols=140 Identities=15% Similarity=0.051 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCC
Q 009099 145 WIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISP 224 (543)
Q Consensus 145 ~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 224 (543)
+...+..++..++.++.|+++||+|||+++++++++.+++.++.+++++...+++++++.|++.++.++...++++|++|
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44556678889999999999999999999999999999999999999988888999999999888888999999999999
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCCChh
Q 009099 225 TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (543)
Q Consensus 225 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~ 286 (543)
.++|++++|+..+...+|.+++|++++.+.. .+...+|++.+++.++.+++.+++||+..
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~--~~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVG--ITKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999999999987764 34567788888777777777777788653
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.53 E-value=4.5e-14 Score=140.35 Aligned_cols=143 Identities=13% Similarity=0.040 Sum_probs=123.2
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhcccccc
Q 009099 134 LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSA 213 (543)
Q Consensus 134 ~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 213 (543)
.+.+..+. |++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+
T Consensus 257 ~~~~~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 257 PEQGTRVF--GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred cCcchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 35555556 9999999999999999999999999999999999999999989999999999999999999999888778
Q ss_pred chhhhhhccCCcccchhhhHH-HHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 214 IVPLYISEISPTEIRGALGSV-NQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 214 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
....++.+.+|++.|+...+. ++....+|.++++.+.+++.+. .||+..|++.+++.++..+..+
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-IGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-hCchHHHHHHHHHHHHHHHHHH
Confidence 888899999999988877655 6677889999999999999876 7899999988887766544433
No 126
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.52 E-value=1.5e-13 Score=135.28 Aligned_cols=354 Identities=17% Similarity=0.157 Sum_probs=203.2
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh---c--ccchhhhhhHHHHHHHHHHHHh----hhH
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF---G--RTRTFQLDAVPLAAGAFLCATA----QSV 194 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~---G--rr~~~~~~~~~~~i~~~~~~~~----~~~ 194 (543)
.+..+.+++++|+++++. ..+.+...+...+ -+++|.++|.+ | ||+.++++.++..++.+.++.. .+.
T Consensus 10 ~~~~~~l~~~l~ls~~~~--~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQL--QRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 347788999999999998 8888888887765 67899999976 3 4555666777666655555553 356
Q ss_pred HHHHHHHHHHhhhccccccchhhhhhccCCc--ccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 195 QTMIIGRVLAGIGIGISSAIVPLYISEISPT--EIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 195 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
....++-++..+|......++-+++.|...+ ++||...+.......+|.+++..++|.+.+. .++++.|.+.+++..
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-~~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-FGPQGVFLISAALPL 165 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-CCCeEEehHHHHHHH
Confidence 6677777888889988889999999988743 3367888888888999999999999998876 789999988887776
Q ss_pred HHHHHhcccCCChhHHHhcCChHHH-HHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHH-HHHHH
Q 009099 273 LLALGMGLSPESPRWLFQQGKKSEA-EKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSV-GAALF 350 (543)
Q Consensus 273 ~~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 350 (543)
+..+..+++.|+.+. ..+.+.... .+....... .. ++....+++.++.+..+...+ ..++.
T Consensus 166 l~~~~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~~--~~--------------~~~~~~l~~~~~~~~i~~~~~~~~~~~ 228 (433)
T PF03092_consen 166 LMLIVALFLLEERKV-RPADEVFSFGKEEVPCLFG--SF--------------REQLSELWRALQQRAIWQPILFFIFFF 228 (433)
T ss_pred HHHHHHHHhhhhccc-cccchhhcccccccchhhH--HH--------------HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 665554444332110 000000000 000000000 00 001122344555555444333 11111
Q ss_pred HHHHhhhhHH-HHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHH-HHH
Q 009099 351 LFQQLAGINA-VVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLS-LSF 426 (543)
Q Consensus 351 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~-~~~ 426 (543)
....... .. ..++........++++... ...+..++.++|..+..+...+..-|+++....++..+..+.-. +..
T Consensus 229 ~~~~~~~-~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~ 307 (433)
T PF03092_consen 229 NLPPSIS-SASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVT 307 (433)
T ss_pred HhccCCC-CccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEE
Confidence 1111000 01 1111111111111333322 33444455566666665555555666666555444333222111 100
Q ss_pred hhcc-c-ccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 009099 427 TWKV-L-APYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG 501 (543)
Q Consensus 427 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g 501 (543)
.++. . -+.. +..+.-..+........+.|... +++++.|+..-|+.+++..++.|+|..++..+...+.+..+
T Consensus 308 ~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~lv-l~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 308 RWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSLV-LAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred EEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHHH-HHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0000 0 0111 22222223333333333444444 68899999999999999999999999999999988888766
No 127
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.50 E-value=9.8e-13 Score=128.46 Aligned_cols=357 Identities=16% Similarity=0.144 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHH----HHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSL----LAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~----~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
+.....+-.+..++......+..+.....++.+.... .+...... .+...+..+..|.++||+|||..+.+....
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 3444455555555555555556666666665443322 13444444 677788999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhhhc--cccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009099 181 LAAGAFLCATAQSVQTMIIGRVLAGIGI--GISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (543)
Q Consensus 181 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~--g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 258 (543)
..+..++..+.. +|.++ +.|+.. +..+....++++|....++|....|+....+..+..++|.+++.+... .
T Consensus 102 ~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~-~ 175 (463)
T KOG2816|consen 102 TILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF-L 175 (463)
T ss_pred HHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-c
Confidence 888888777766 43333 444433 345677888999999999999999999999999999999999998765 7
Q ss_pred chHHHHHHhHHHHHHHHH-HhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhc-
Q 009099 259 WWRTMFGLAAIPSILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFS- 336 (543)
Q Consensus 259 ~wr~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 336 (543)
+.-..|++..+..++..+ ...++||+... +.+.+ ....+....... .......+....+
T Consensus 176 ~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 236 (463)
T KOG2816|consen 176 GIALVFLIAAASGILSLLYMLLFLPESLQE---KERSD---ATLRELTPGSLD-------------SSHVADAFQSLTKV 236 (463)
T ss_pred CchHHHHHHHHHHHHHHHHHhhccccccCc---ccccc---ccccccCCCccc-------------chhhhhhhhhhccc
Confidence 888888888887777555 44556877542 11110 000000000000 0000011111111
Q ss_pred --cchhHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHH-HhhhccCChhHHHH
Q 009099 337 --SRYWKVVSVGAALFLFQQLAGIN-AVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVAS-SLMDRQGRKNLLTF 410 (543)
Q Consensus 337 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~ 410 (543)
.+....+.+...+.......... ...+|+. ..++++.... ..........++.++.. .+...++.|+.+..
T Consensus 237 ~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~---~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l 313 (463)
T KOG2816|consen 237 GPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLK---AKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL 313 (463)
T ss_pred CCCccchHHHHHHHHHHHHHhcCceeEEEEEEe---eecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH
Confidence 11111111111111111111111 1111111 2245655544 45555666777776665 77778898888888
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHH
Q 009099 411 SFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIG 490 (543)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 490 (543)
+.....+..+..++.. ..|...... .+ ..+.....+...+.+....+++.+|++.++...+..+.+.++|
T Consensus 314 Gl~~~~~~~~~~af~~--------~~w~~~~~~-v~-~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~ 383 (463)
T KOG2816|consen 314 GLLSEFLQLLLFAFAT--------ETWMMFAAG-VV-VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSP 383 (463)
T ss_pred HHHHHHHHHHHHHHhc--------cchhhhHHH-HH-HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhH
Confidence 8888888888888752 222222222 22 2223344556666788888899999999999999999999999
Q ss_pred HhhHHHHHhh
Q 009099 491 LYFLSVVNKF 500 (543)
Q Consensus 491 ~~~g~~~~~~ 500 (543)
.+.+.++..+
T Consensus 384 ~~~~~i~~~t 393 (463)
T KOG2816|consen 384 ALYGNIFALT 393 (463)
T ss_pred HHHHHHHHHH
Confidence 9999887543
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.50 E-value=2.9e-13 Score=134.15 Aligned_cols=154 Identities=19% Similarity=0.158 Sum_probs=130.7
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 205 (543)
..|.+.++.|.+..+. +++.+.+.++..++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+.+.-++.|
T Consensus 242 ~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (406)
T PRK11551 242 WLPSLLVGQGLSRSQA--GLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAG 319 (406)
T ss_pred HHHHHHHhCCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 4677778889988888 99999999999999999999999999999998877777777777777888888888888899
Q ss_pred hhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 206 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
++.+...+...+++.|.+|+++|++++|+.+....+|..++|.+++.+.+...+|...+++.....++..+..+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 320 LFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9888788888899999999999999999999999999999999999988765567777776666665555544443
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.49 E-value=3.2e-13 Score=132.50 Aligned_cols=146 Identities=15% Similarity=0.041 Sum_probs=125.5
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhH--HHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSV--QTMIIGRVL 203 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l 203 (543)
..+.+.++++.+..+. +++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+.++. ..+++..++
T Consensus 227 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFL--VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 4455667888887777 999999999999999999999999999999999999998888887777643 334566788
Q ss_pred HhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHH
Q 009099 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 274 (543)
.|++.+...+....++.|.+|+++|+++.|+......+|..++|.+.+.+.+. .||++.|++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-IGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-hchhhHHHHHHHHHHHh
Confidence 88888888888888999999999999999999999999999999999998866 78999998888776654
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.48 E-value=7e-13 Score=131.04 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=128.3
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 205 (543)
..+.+.++.|. +.. ++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|
T Consensus 238 ~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 313 (399)
T PRK05122 238 FITLYYAARGW--DGA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHccc--ccc--hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34444455565 334 67778889999999999999999999999999999988888888888889888889999999
Q ss_pred hhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCC
Q 009099 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPE 283 (543)
Q Consensus 206 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 283 (543)
++.+..++.....+.|.+|+++|++++++++....+|..+++.+.+.+.+. .||++.|++.++..++..+..+++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 314 FGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-FGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999988888888888999999999999999999999998888888888765 78999999988877776665555443
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.48 E-value=1.2e-12 Score=127.02 Aligned_cols=163 Identities=24% Similarity=0.347 Sum_probs=143.3
Q ss_pred HHHHHHHHhhhhHHHHHHHc-CCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccc-hhhhhhHHHHHHHHHHHHhh
Q 009099 115 LFGYHLGVVNGALEYLAKDL-GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTR-TFQLDAVPLAAGAFLCATAQ 192 (543)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~-~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~-~~~~~~~~~~i~~~~~~~~~ 192 (543)
.............|.+.++. |.+..+. ++..+...++..++.++.|++.||+|||+ .+..+..+..++.++..+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 186 LLSFGYYGLLTYLPLYLQEVLGLSAAEA--GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHhHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 33333444445566665554 8888887 99999999999999999999999999999 99999999999999999999
Q ss_pred hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 193 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
+.+.+++..++.|++.+...+....++.|..|+++|++.+++......+|..+++.+.+.+.+. .+|++.+++.+++.+
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-~~~~~~~~~~~~~~~ 342 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-GGYGGVFLILAALAL 342 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998865 799999999999888
Q ss_pred HHHHHhcc
Q 009099 273 LLALGMGL 280 (543)
Q Consensus 273 ~~~~~~~~ 280 (543)
+..+..++
T Consensus 343 i~~i~~~~ 350 (352)
T cd06174 343 LAALLLLL 350 (352)
T ss_pred HHHHHhee
Confidence 77666544
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.46 E-value=2.2e-12 Score=126.44 Aligned_cols=151 Identities=22% Similarity=0.240 Sum_probs=126.9
Q ss_pred HHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhh
Q 009099 128 EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIG 207 (543)
Q Consensus 128 ~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 207 (543)
.++.+++|.++.+. +++.+.......++.++.|++.||+|||+++.++.++..+...+..+.++.+.+++.+++.|++
T Consensus 224 ~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 301 (375)
T TIGR00899 224 LLIIHELGLPDKLA--GLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIF 301 (375)
T ss_pred HHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567889988887 8888888777788899999999999999999888777666666666778888888899999999
Q ss_pred ccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccC
Q 009099 208 IGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSP 282 (543)
Q Consensus 208 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 282 (543)
.+...+....++.|..|++ +++++++++....+|..++|.+++.+.+. .||+..|++.++..++..+...+++
T Consensus 302 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAER-WSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHheec
Confidence 8888888888889988764 67999999999999999999999988765 7899999998888777666655544
No 133
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.45 E-value=1.1e-11 Score=113.83 Aligned_cols=257 Identities=18% Similarity=0.134 Sum_probs=158.6
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHH
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 203 (543)
+|..-.+-+++|.++.++ +.+...-+....+..++.|.++||+|||+.-+..+++.+++++ +-..++++.++++|++
T Consensus 54 GpY~Y~LY~~yg~~~~qI--a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvl 130 (354)
T PF05631_consen 54 GPYLYALYESYGFSEHQI--AILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVL 130 (354)
T ss_pred cchhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHH
Confidence 444445557899999999 9999999999999999999999999999999999999998885 4556899999999999
Q ss_pred Hhhhccccccchhhhh-hcc----CCcccchhhhHHHH-HHHHHHHHHHHHhhcccCCC-CCchHHHHHHhHHHHHHHHH
Q 009099 204 AGIGIGISSAIVPLYI-SEI----SPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGN-PLWWRTMFGLAAIPSILLAL 276 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~-~~~wr~~f~~~~~~~~~~~~ 276 (543)
.|++.+..+.+--+++ .|+ +|++..+..++... ...++-.+++.+++.++.+. ..|-..+|....++.++..+
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 9999999888877664 443 22232233333222 22233344445555554432 12347788777766666555
Q ss_pred Hhc-ccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHh
Q 009099 277 GMG-LSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQL 355 (543)
Q Consensus 277 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 355 (543)
++. ..+|+.... .+..+..+..+ ..++.++++++.. +......+...
T Consensus 211 ~I~~~W~ENyg~~---~~~~~~~~~~~--------------------------~a~~~i~~d~ril---~LG~~qslFE~ 258 (354)
T PF05631_consen 211 LILKTWPENYGDT---SSSSSLSGSFR--------------------------EAWRAILSDPRIL---LLGLIQSLFEG 258 (354)
T ss_pred HHHhcccccCCCc---ccccchHHHHH--------------------------HHHHHHHcCchhH---HHHHHHHHHHH
Confidence 443 346654310 01111111000 1122334444433 33344445555
Q ss_pred hhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-cCChhHHHHHHHHH
Q 009099 356 AGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDR-QGRKNLLTFSFTGM 415 (543)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~ 415 (543)
..+..+..|.|.+..+...-+.+.++..+.++.++|+.+..++..+ ......+...+.+.
T Consensus 259 smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~a 319 (354)
T PF05631_consen 259 SMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVA 319 (354)
T ss_pred HHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 6677777778877532222344666777778888888888665544 33334343333333
No 134
>PRK12382 putative transporter; Provisional
Probab=99.44 E-value=2.9e-12 Score=126.27 Aligned_cols=149 Identities=16% Similarity=0.167 Sum_probs=127.2
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 205 (543)
..+...++.+.+ +. ++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++.|
T Consensus 238 ~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 238 FVSLYFASKGWA--MA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHhcCCc--hh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 444444556654 34 66777888888999999999999999999999999999998888888888888889999999
Q ss_pred hhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 206 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
++.+...+.....+.|.+++++|++++++++....+|..++|.+.+.+.+. .||++.|++.++..++..+..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-FGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHH
Confidence 999988888888889999999999999999999999999999999998876 7899999998887776555443
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.42 E-value=3.8e-12 Score=124.77 Aligned_cols=147 Identities=11% Similarity=0.003 Sum_probs=129.5
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 205 (543)
..|...+++|.+..+. |++.+...++..++.++.+++.||+|+|+.+.++.+..++..++.+++++.+.+++.+++.|
T Consensus 227 ~~~~~l~~~g~s~~~~--g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g 304 (382)
T TIGR00902 227 FSAIYWQAAGISASAT--GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHC 304 (382)
T ss_pred HHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 4455556799999888 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccchhhhhhccCCcccchhhhHHHH-HHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 206 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
+..+...+....++.+. |+++|+++.++++ ...++|..+++.++|++.+. .|+ ..|++.++++++..++
T Consensus 305 ~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~-~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 305 GTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT-LGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccH-HHHHHHHHHHHHHHHH
Confidence 99999999999999998 9888999999986 57789999999999999977 576 5677777766654443
No 136
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.40 E-value=7.3e-12 Score=126.17 Aligned_cols=154 Identities=18% Similarity=0.101 Sum_probs=116.1
Q ss_pred hhhHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHH--HHHhhhHHHHHHH
Q 009099 124 NGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL--CATAQSVQTMIIG 200 (543)
Q Consensus 124 ~~~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~--~~~~~~~~~l~~~ 200 (543)
....| ++++++|.+..+. ++..+.+.++..++.+++|+++||+|||+.++....+..++..+ ....++.+.+.++
T Consensus 278 ~~~~p~yl~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (467)
T PRK09556 278 DNWSPVYAFQELGFSKEDA--INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLAS 355 (467)
T ss_pred HHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 33455 5667899998888 99999999999999999999999999998876655444443322 2334567677788
Q ss_pred HHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHH-HHHHHHHhhcccCCC-----------CCchHHHHHHhH
Q 009099 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICV-GILAALVAGLPLAGN-----------PLWWRTMFGLAA 268 (543)
Q Consensus 201 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~~~~~l~~~-----------~~~wr~~f~~~~ 268 (543)
+++.|++.............|.+|+++|+.+.|+.+....+ |..++|.+.|.+.+. ..+|+..|++.+
T Consensus 356 ~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~ 435 (467)
T PRK09556 356 LFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALD 435 (467)
T ss_pred HHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHH
Confidence 88888654433333345677999999999999999988886 778889888888871 267999998887
Q ss_pred HHHHHHHHHhc
Q 009099 269 IPSILLALGMG 279 (543)
Q Consensus 269 ~~~~~~~~~~~ 279 (543)
+..++..+..+
T Consensus 436 ~~~~~~~~~~~ 446 (467)
T PRK09556 436 IAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHH
Confidence 77766554443
No 137
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=9.8e-12 Score=116.95 Aligned_cols=172 Identities=20% Similarity=0.140 Sum_probs=141.8
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHH
Q 009099 345 VGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLL 422 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 422 (543)
+...+..+......+...-.+|.+.++++.+.... ....+..+..++.++...+.||+.||++++....+..++.++.
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~ 95 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS 95 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Confidence 33344444444557777888899999999988755 6777889999999999999999999999999999999999998
Q ss_pred HHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhcc
Q 009099 423 SLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGI 502 (543)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~ 502 (543)
.+.. +....+++-++.+...+ .++++...+..++.|+++|+++++++.+...++..+|.++..++-|.+||
T Consensus 96 alAp--------~f~~Ll~aR~~~g~a~G-~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 96 ALAP--------SFAVLLLARALAGLAHG-VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHhc--------cHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 8862 22344444444444443 34566777899999999999999999999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHhhheecc
Q 009099 503 STVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
+.+|++.+++.++..+..+..+|
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999888888888
No 138
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.40 E-value=1.9e-12 Score=129.55 Aligned_cols=149 Identities=15% Similarity=0.146 Sum_probs=123.5
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh--cccchhhh--hhHHHHHHHHHHHHhhhHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF--GRTRTFQL--DAVPLAAGAFLCATAQSVQTMIIGR 201 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~--Grr~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~r 201 (543)
.+|.+.+++|.+..+. +++.++..++..+++++.|+++||. ++|+...+ +.++.+++.+++.+.++++.+++.+
T Consensus 263 ~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~ 340 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEA--AFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 4566667789988888 9999999999999999999999984 34433333 3344455556667788999999999
Q ss_pred HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHH
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL 276 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 276 (543)
++.|++.+...+...+++.|.+|++++++++++++....+|..+||.+++.+.+...+|++.|++.+++.++..+
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999998889999999999999999999999999999999999999999987645799999998887665544
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.40 E-value=2.4e-12 Score=127.78 Aligned_cols=156 Identities=20% Similarity=0.173 Sum_probs=128.4
Q ss_pred hhhhHHHHHHHcCCCcchh--hHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHH
Q 009099 123 VNGALEYLAKDLGIAENTV--LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIG 200 (543)
Q Consensus 123 ~~~~~~~i~~~~~~s~~~~--~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 200 (543)
..+..+...++.+.+..+. ..+.+.+++.++..++.+++|+++||+|||+.+..+.++..++.+...+.++.+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3445555545443332221 23667777888888999999999999999999999998888888888888889999999
Q ss_pred HHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 201 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
+++.|++.+...+.....+.+..++++|++.+++......+|..+||.+++.+.+. .+|++.|++.+++.++..+..+
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 318 RFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-YGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999898888889999999999999999999999999999999998866 7899999999888877665543
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.39 E-value=7.9e-12 Score=123.48 Aligned_cols=153 Identities=18% Similarity=0.162 Sum_probs=111.0
Q ss_pred HhhhhHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhh-hhhHHH-------HHHHHHHHHhh
Q 009099 122 VVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ-LDAVPL-------AAGAFLCATAQ 192 (543)
Q Consensus 122 ~~~~~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~-------~i~~~~~~~~~ 192 (543)
......| ++.+++|.+..+. +++.+...++..++.++.|+++||+|||+... ...... .+........+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEA--GFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN 310 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch
Confidence 3344445 4556788888887 99999999999999999999999999996211 111111 11111112223
Q ss_pred hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc-hHHHHHHhHHHH
Q 009099 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW-WRTMFGLAAIPS 271 (543)
Q Consensus 193 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-wr~~f~~~~~~~ 271 (543)
+.+..+...++.+.+.+ ..+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+. .+ |++.|++.++..
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~-~g~~~~~~~~~~~~~ 388 (399)
T TIGR00893 311 IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT-TGSFAGALMVVAALA 388 (399)
T ss_pred hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC-CCchhHHHHHHHHHH
Confidence 44444444455555544 7888999999999999999999999999999999999999999876 56 999998888777
Q ss_pred HHHHHHh
Q 009099 272 ILLALGM 278 (543)
Q Consensus 272 ~~~~~~~ 278 (543)
++..+..
T Consensus 389 ~~~~~~~ 395 (399)
T TIGR00893 389 LIGALSY 395 (399)
T ss_pred HHHHHHH
Confidence 6655443
No 141
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.39 E-value=2.1e-11 Score=120.60 Aligned_cols=176 Identities=11% Similarity=-0.004 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHH
Q 009099 344 SVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLL 421 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 421 (543)
.+..++.++..+.-...+.+..+.+.++++.+.... ......++..++.++.|++.||+|||+.+..+.++..++.++
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 89 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTA 89 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 333333444444445566666777778888877755 556677888899999999999999999999998888888877
Q ss_pred HHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH---
Q 009099 422 LSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN--- 498 (543)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~--- 498 (543)
..+.. +.....+.-++.+.+.+. ..+....++.|.+|+++|++++++.+....+|..+++.+.+.+.+
T Consensus 90 ~~~~~--------~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 90 TMFAT--------GPESLYLLRILVGIAEAG-FLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHhc--------CHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 76641 223334444444444432 345555678999999999999999999999999999999998875
Q ss_pred ---hhccccchhhhhHHHHHHHHhhheecccCC
Q 009099 499 ---KFGISTVYLGFATVCLLAVLYIAVNVVETK 528 (543)
Q Consensus 499 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (543)
..||+..|.+.++..++..++.+++.+|++
T Consensus 161 ~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 161 LMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 358999999988777766666666666654
No 142
>PRK10054 putative transporter; Provisional
Probab=99.38 E-value=2.1e-11 Score=119.90 Aligned_cols=159 Identities=18% Similarity=0.131 Sum_probs=111.2
Q ss_pred hHHHHHHH-HHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 358 INAVVYYS-TSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 358 ~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
......+. +++.+++|.+.... ......++.+++.++.|+++||+|||+.+..+.++..++.+++.+..
T Consensus 23 ~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~-------- 94 (395)
T PRK10054 23 RGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN-------- 94 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh--------
Confidence 33334344 44445678877654 55556678888999999999999999999888877777766665531
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHH
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCL 514 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 514 (543)
+.+..++...+.+.+.. ...+....+..|..|++.|+++.|+.+...++|.+++|.+.+.+.+ .||+..|.+.+++.+
T Consensus 95 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 95 NVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSA 172 (395)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHH
Confidence 11222222223332222 2344556677899999999999999999999999999999998875 689999988877777
Q ss_pred HHHHhhheeccc
Q 009099 515 LAVLYIAVNVVE 526 (543)
Q Consensus 515 ~~~~~~~~~~~~ 526 (543)
+..++..+..++
T Consensus 173 i~~i~~~~~~~~ 184 (395)
T PRK10054 173 FPLVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHHHhc
Confidence 665544443433
No 143
>TIGR00895 2A0115 benzoate transport.
Probab=99.37 E-value=1.5e-11 Score=121.50 Aligned_cols=163 Identities=22% Similarity=0.199 Sum_probs=120.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 356 AGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
........+.|.+.++++.+.... ......++.+++.++.|+++||+|||+.+..+..+..++.+++.+.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-------- 102 (398)
T TIGR00895 31 YDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA-------- 102 (398)
T ss_pred HHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc--------
Confidence 334556667788888888876644 5556678889999999999999999999998888777777666543
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHH
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVC 513 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 513 (543)
.+.+..++..++.+.+.+ ...+....++.|.+|++.|++++++.+....+|..+++.+.+.+.+..||+..+.+.+++.
T Consensus 103 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 181 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAP 181 (398)
T ss_pred cchHHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHH
Confidence 122233333333333333 3445666688999999999999999999999999999999999999999999988887666
Q ss_pred HHHHHhhheecccC
Q 009099 514 LLAVLYIAVNVVET 527 (543)
Q Consensus 514 ~~~~~~~~~~~~~~ 527 (543)
++..++.+.+.+++
T Consensus 182 ~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 182 LLLLLLLMRFLPES 195 (398)
T ss_pred HHHHHHHHHhCCCC
Confidence 65555555555544
No 144
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.37 E-value=2.8e-11 Score=118.91 Aligned_cols=157 Identities=18% Similarity=0.204 Sum_probs=118.5
Q ss_pred HHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhH
Q 009099 362 VYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLA 439 (543)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (543)
....|.+.++++.++... ......++..++.++.|++.||+|||+.+..+..+.+++.++..+.. +.+..
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--------~~~~l 111 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--------SFSLL 111 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--------hHHHH
Confidence 334666778888877644 44566788888999999999999999999999999888777765531 22333
Q ss_pred HHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHh
Q 009099 440 VLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLY 519 (543)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 519 (543)
++.-.+.+.+.+. ..+....++.|.+|+++|+.++++.....+++..++|.+.+.+.+..||+..|++.+++.+++.+.
T Consensus 112 ~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 112 LIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred HHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 4444444444433 345566678899999999999999999999999999999999999999999998887776665544
Q ss_pred hheecccC
Q 009099 520 IAVNVVET 527 (543)
Q Consensus 520 ~~~~~~~~ 527 (543)
.....|+.
T Consensus 191 ~~~~~p~~ 198 (394)
T PRK10213 191 IIKSLPSL 198 (394)
T ss_pred HHHHCCCC
Confidence 44334543
No 145
>PRK09952 shikimate transporter; Provisional
Probab=99.37 E-value=1e-11 Score=123.91 Aligned_cols=157 Identities=18% Similarity=0.113 Sum_probs=115.1
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH---h-hhHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT---A-QSVQTMIIGR 201 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~-~~~~~l~~~r 201 (543)
..+++.+++|.+.... ..+..+..+...++.+++|+++||+|||++++.+.++..++.+.+.. . ++.+.+++..
T Consensus 273 ~~~y~~~~~g~s~~~~--~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 273 ALNYSTQNLGLPRELF--LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 3345667788887655 55566666777888899999999999999988887766555433322 2 2344445566
Q ss_pred HHHhhhccccccchhhhhhccCCcccchhhhHHHH-HHHHHHHHHHHHhhcccCCCC-CchHHHHHHhHHHHHHHHHHhc
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNP-LWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
++.|++.+...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+.. .+|+..+...++..++..+..+
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 77788888778888899999999999988888854 445588889999998886632 4588888887777777666655
Q ss_pred ccCCC
Q 009099 280 LSPES 284 (543)
Q Consensus 280 ~~~e~ 284 (543)
.++|+
T Consensus 431 ~~~~~ 435 (438)
T PRK09952 431 LMKDN 435 (438)
T ss_pred Hcccc
Confidence 55553
No 146
>PRK03545 putative arabinose transporter; Provisional
Probab=99.37 E-value=1.6e-11 Score=120.92 Aligned_cols=149 Identities=13% Similarity=0.105 Sum_probs=120.9
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH-HHHHHhhhHHHHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA-FLCATAQSVQTMIIGRVLA 204 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~r~l~ 204 (543)
..|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||++. .+..+..++. .+....++.+.++++.++.
T Consensus 228 ~~~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 228 IEPFVQQVAGLSENFA--TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHhcCCCccHH--HHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 4556667789988888 9999999999999999999999999988754 4444444443 3345567888888899999
Q ss_pred hhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 205 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
|++.+...+.....+.+..| ++|+++++++.....+|..+||++++.+.+. .|++..|++.+++.++..+...
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH-LGLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChhHHHHHHHHHHHHHHHHHH
Confidence 99987777777778888776 5789999999999999999999999999877 8999999999888776555443
No 147
>PRK03699 putative transporter; Provisional
Probab=99.37 E-value=9.5e-12 Score=122.55 Aligned_cols=153 Identities=13% Similarity=0.067 Sum_probs=126.2
Q ss_pred hhHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHH
Q 009099 125 GALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (543)
Q Consensus 125 ~~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 203 (543)
...| ++.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+.+.....+..+...+....++.+.+.+..++
T Consensus 226 ~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK03699 226 SWVPEYAQKKFGMSLEDA--GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILG 303 (394)
T ss_pred HHHHHHHHHHcCCChHHh--hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 3445 4457789998888 999999999999999999999999999999988888777777777777888777778889
Q ss_pred HhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
.|++.+..++...++..+..+. ++++..+.......+|..++|.+.+++.+. .||+..+++.+++.++..+....+
T Consensus 304 ~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 304 LGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAH-FGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCchhhhhhhHHHHHHHHHHHHHH
Confidence 9998888888877777777764 467888888888899999999999999876 789999998888777665554444
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.36 E-value=2.4e-11 Score=119.53 Aligned_cols=158 Identities=15% Similarity=0.097 Sum_probs=121.7
Q ss_pred hhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh-hHHHHHHHHHH
Q 009099 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ-SVQTMIIGRVL 203 (543)
Q Consensus 125 ~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l 203 (543)
...|.+.+++|.+..+. |+..+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ +...+ .-++
T Consensus 226 ~~lp~~l~~~g~s~~~a--g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l 301 (393)
T PRK09705 226 AWLPAFYIEIGASAQYS--GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMV 301 (393)
T ss_pred HHHHHHHHHcCCChhhh--hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHH
Confidence 34555556789998888 9999999999999999999999999999999888877777766554333 22222 2346
Q ss_pred HhhhccccccchhhhhhccCC-cccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH-hccc
Q 009099 204 AGIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG-MGLS 281 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~ 281 (543)
.|++.+...+.......+.++ +++|++.+++.+....++..++|.+.+++.+...+|...|++.++..++..+. ..+.
T Consensus 302 ~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 302 CGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 688888777877767777775 57789999999999999999999999999877456888888887777665544 3444
Q ss_pred CCChh
Q 009099 282 PESPR 286 (543)
Q Consensus 282 ~e~~~ 286 (543)
||++.
T Consensus 382 ~~~~~ 386 (393)
T PRK09705 382 PARFP 386 (393)
T ss_pred ccccc
Confidence 66654
No 149
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.36 E-value=1.2e-11 Score=121.17 Aligned_cols=149 Identities=17% Similarity=0.180 Sum_probs=122.7
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHh
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 205 (543)
.+|.+.++.|.+.++. +++.+.+.++..+++++.|++.||+|+|+++..+..+.+++.+... . ...+....++.|
T Consensus 222 ~lp~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 222 LMPLYLNHQGMSDASI--GFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 4676777788888877 9999999999999999999999999999999888888777665443 2 234456778888
Q ss_pred hhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcc
Q 009099 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL 280 (543)
Q Consensus 206 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 280 (543)
++.....|...+.+.|..|+++++.+.+......++|..+||.+++++.++ .+|++.|.+.+.+.++..+..++
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-YSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHh
Confidence 887778888999999999988888888888888999999999999999876 78999999888877766555443
No 150
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.36 E-value=2.3e-11 Score=119.69 Aligned_cols=162 Identities=15% Similarity=0.108 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYS 435 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (543)
........|.+.++++.+.... ......++..++.++.|++.||+|||+.+..+..+..++.+.+.... +
T Consensus 21 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--------~ 92 (385)
T TIGR00710 21 IDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN--------N 92 (385)
T ss_pred HHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--------c
Confidence 3444445677778888876644 56667788899999999999999999999998888888777766531 2
Q ss_pred chhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHH
Q 009099 436 GTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLL 515 (543)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 515 (543)
.+...+..++.+.+.+ ...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|+..+.+.+++.++
T Consensus 93 ~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 171 (385)
T TIGR00710 93 IETLLVLRFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGIL 171 (385)
T ss_pred HHHHHHHHHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 2223333333333332 233455568889999999999999999999999999999999999999999999888877777
Q ss_pred HHHhhheecccCC
Q 009099 516 AVLYIAVNVVETK 528 (543)
Q Consensus 516 ~~~~~~~~~~~~~ 528 (543)
..++.++..||++
T Consensus 172 ~~~~~~~~~~~~~ 184 (385)
T TIGR00710 172 LSALIFFILPETL 184 (385)
T ss_pred HHHHHHHhCCCCC
Confidence 6666555555544
No 151
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.35 E-value=5.1e-12 Score=124.74 Aligned_cols=147 Identities=19% Similarity=0.108 Sum_probs=114.5
Q ss_pred hhhHHHH-HHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH--HHHHH--hhhHHHHH
Q 009099 124 NGALEYL-AKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA--FLCAT--AQSVQTMI 198 (543)
Q Consensus 124 ~~~~~~i-~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~--~~~~~--~~~~~~l~ 198 (543)
....|.+ ++++|.+..+. +++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+ .++.+.++
T Consensus 239 ~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (394)
T TIGR00883 239 TTYLPTYLTQTLGLSANSA--LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFF 316 (394)
T ss_pred HHHHHHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 3445544 47788888887 999999999999999999999999999998776555444433 22222 25677777
Q ss_pred HHHHHHhhhccccccchhhhhhccCCcccchhhhHH-HHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSV-NQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 199 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
+..++.|++.+...+...+++.|.+|+++|++++++ ...+..+|..++|.+++++.+....|++.++...+..+
T Consensus 317 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 317 FLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 888999999888899999999999999999999998 45666788889999999988763338887766655443
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.35 E-value=3.7e-11 Score=119.86 Aligned_cols=158 Identities=15% Similarity=0.106 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 009099 359 NAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSG 436 (543)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (543)
.....+.+.+.++++.+.... ......++..++.++.|++.||+|+|+.+..+.++..++.+++.+.. +.
T Consensus 40 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~~ 111 (434)
T PRK11663 40 KSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS--------SL 111 (434)
T ss_pred hhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh--------HH
Confidence 355667788888888887654 55667788899999999999999999999999888888877666531 11
Q ss_pred hhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHH
Q 009099 437 TLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLA 516 (543)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 516 (543)
+...+..++.+.+.+. ..+....++.|.+|+++|++++++.+...++|..++|.+.+.+.+..||+..|.+.+++.++.
T Consensus 112 ~~l~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 112 WAFALLWVLNAFFQGW-GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHc-cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 2222222333333333 234555688899999999999999999999999999999999999999999998887766555
Q ss_pred HHhhheecc
Q 009099 517 VLYIAVNVV 525 (543)
Q Consensus 517 ~~~~~~~~~ 525 (543)
.++..+..+
T Consensus 191 ~~~~~~~~~ 199 (434)
T PRK11663 191 GLFLCWRLR 199 (434)
T ss_pred HHHHHHHcC
Confidence 443333333
No 153
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=6.3e-12 Score=124.60 Aligned_cols=138 Identities=25% Similarity=0.236 Sum_probs=114.1
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH-HHHHhhhHHHHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF-LCATAQSVQTMIIGRVLA 204 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~l~~~r~l~ 204 (543)
..+++.+++|.+..+. +++.+.+.++..++.++.|++.||+|||+.+..+.++.++..+ +....++.+.+.+..++.
T Consensus 261 ~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (405)
T TIGR00891 261 LPTYLKADLGLSPHTV--ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQ 338 (405)
T ss_pred hHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 3445667789998888 9999999999999999999999999999998888776543332 334456777777777888
Q ss_pred hhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCc-hHHHHHH
Q 009099 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW-WRTMFGL 266 (543)
Q Consensus 205 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-wr~~f~~ 266 (543)
|++.+...+....++.|.+|+++|++++|+.+....+|..++|++++.+.+. .| |+..+..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~g~~~~~~~~ 400 (405)
T TIGR00891 339 QMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR-LDEYGTALAS 400 (405)
T ss_pred HHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHh
Confidence 8777777788888999999999999999999999999999999999999876 55 7766654
No 154
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.33 E-value=1.6e-11 Score=124.69 Aligned_cols=161 Identities=13% Similarity=0.024 Sum_probs=124.0
Q ss_pred HhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh-----h----
Q 009099 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-----Q---- 192 (543)
Q Consensus 122 ~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-----~---- 192 (543)
......|.+.+++|.+..+. ++....+.++..++.+++|+++||+|||+.+.++.++.+++.++.++. +
T Consensus 302 ~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (481)
T TIGR00879 302 AIMYYSPTIFENAGVSTDHA--FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSK 379 (481)
T ss_pred ehHHHHHHHHHHcCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Confidence 33446688888999988777 899999999999999999999999999999999988888877766621 1
Q ss_pred --hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHH
Q 009099 193 --SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP 270 (543)
Q Consensus 193 --~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~ 270 (543)
+...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.+. .+|++.|++.+++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~-~~~~~~f~~~~~~ 458 (481)
T TIGR00879 380 SSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES-IGVGGVFIFFGGL 458 (481)
T ss_pred chhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccceehhHHHH
Confidence 2333333333333333334466677889999999999999999999999999999998888765 7899999998888
Q ss_pred HHHHHHHhc-ccCCCh
Q 009099 271 SILLALGMG-LSPESP 285 (543)
Q Consensus 271 ~~~~~~~~~-~~~e~~ 285 (543)
+++.++..+ +.||++
T Consensus 459 ~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 459 NVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHheecccCC
Confidence 777665544 446543
No 155
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.32 E-value=2.1e-11 Score=124.05 Aligned_cols=163 Identities=13% Similarity=0.055 Sum_probs=124.1
Q ss_pred hhhHHHHHHHHHHHHHcCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 356 AGINAVVYYSTSVFRSVGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
..........|.+.++++.+... .......++.+++.++.|++.||+|||+.+..+..+..++.+++...
T Consensus 16 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------- 87 (485)
T TIGR00711 16 LDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-------- 87 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc--------
Confidence 33556667788888888877653 36677788999999999999999999999999988888887776543
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHH
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVC 513 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 513 (543)
.+....++..++.+.+.+ ...+....++.|.+|++.|+++.++......+|..++|.+.+.+.++.||++.|++.+.+.
T Consensus 88 ~~~~~l~~~~~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~ 166 (485)
T TIGR00711 88 PNLELMIIFRVIQGFGGG-PLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIG 166 (485)
T ss_pred CCHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHH
Confidence 122333333333333332 3445666688999999999999999999999999999999999999999999999887777
Q ss_pred HHHHHhhheecccC
Q 009099 514 LLAVLYIAVNVVET 527 (543)
Q Consensus 514 ~~~~~~~~~~~~~~ 527 (543)
++..++..+..+++
T Consensus 167 ~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 167 IIVVVVAFFILPRD 180 (485)
T ss_pred HHHHHHHHHHcCCc
Confidence 66665555555543
No 156
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.32 E-value=4.2e-11 Score=121.38 Aligned_cols=175 Identities=14% Similarity=0.034 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchh--HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHH
Q 009099 344 SVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDV--AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLL 421 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 421 (543)
+....+..+....-.+.+..-.|.+.++++.+... .....+.++...+.+..|+++||+|||+.+..+..+..++.++
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~ 87 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLA 87 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 33344444444444566677788888888876543 3556667777888899999999999999999999998888888
Q ss_pred HHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccc-cChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 009099 422 LSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEI-FASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF 500 (543)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 500 (543)
+.+. .+.+..++.-.+.+.+.+. ..+.....+.+. .|+++|++++|+......+|..++|.+.|.+.++.
T Consensus 88 ~~~a--------~~~~~li~~r~l~G~g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 88 AAFS--------PTASWLIATRALLAIGAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHHc--------CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 7764 1233344444445544443 333333344444 47789999999999999999999999999999999
Q ss_pred ccccchhhhhHHHHHHHHhhheecccC
Q 009099 501 GISTVYLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 501 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
||++.|++...+.++..++.+++.|+.
T Consensus 159 gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 159 YWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999988877777666655555554
No 157
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.31 E-value=4.6e-11 Score=117.78 Aligned_cols=164 Identities=21% Similarity=0.200 Sum_probs=120.0
Q ss_pred hhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 356 AGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
.+........|.+.++.+.+.... ......++..++.++.|+++||+|||+.+..+..+..++.+++....
T Consensus 17 ~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~------- 89 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE------- 89 (392)
T ss_pred HHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC-------
Confidence 334455567788888888877644 55566778888999999999999999999998888877777665431
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHH
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVC 513 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 513 (543)
+.+...+..++.+.+.+ ...+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..||+..+.+.+++.
T Consensus 90 -~~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~ 167 (392)
T PRK10473 90 -TSSLFLAGRFLQGIGAG-CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMG 167 (392)
T ss_pred -cHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHH
Confidence 12222333333333322 2234455688899999999999999999999999999999998888889999888888777
Q ss_pred HHHHHhhheecccCC
Q 009099 514 LLAVLYIAVNVVETK 528 (543)
Q Consensus 514 ~~~~~~~~~~~~~~~ 528 (543)
++..++.....+|++
T Consensus 168 ~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 168 ILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHcCCCC
Confidence 776665555555543
No 158
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.31 E-value=1.6e-10 Score=109.38 Aligned_cols=366 Identities=14% Similarity=0.084 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHH
Q 009099 105 FVGVACLGAILFGYHLGVVNGALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (543)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 183 (543)
...++|+..|...+-- .-+.+.|++.+. .|++.+++. .-+.-...-.+....++...+.|..|.|++++++.+...+
T Consensus 6 ~~~llc~~gf~~~frP-sEPfl~~yL~~~~kn~T~~qv~-~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~ 83 (412)
T PF01770_consen 6 ITLLLCLFGFFKEFRP-SEPFLTPYLTGPDKNFTEEQVN-NEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYII 83 (412)
T ss_pred HHHHHHHHHHHHhcCC-CCccchHHHcCCccCCCHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3444455555543311 123355566654 788877762 4566666777778889999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC-CCCchHH
Q 009099 184 GAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG-NPLWWRT 262 (543)
Q Consensus 184 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-~~~~wr~ 262 (543)
...+.-+.++...+-+..++-|++.+. ..+-.+++-...++++-.++.+...+...+|..++.++|-.+.. .....+.
T Consensus 84 t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~ 162 (412)
T PF01770_consen 84 TWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQ 162 (412)
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999999874 67777888888898888899999888888888888887766654 2356777
Q ss_pred HHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHH-HHhCchhhHHHHHHHHH-hccCCCCccc-------chhh
Q 009099 263 MFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQ-TLYGKERVSEVMLDLTN-AGQGSAEPEA-------GWFD 333 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~ 333 (543)
.+++......+.++..+++|..++...-+++.....+..+ +....++..+...+.++ ....+...+. .+++
T Consensus 163 L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 242 (412)
T PF01770_consen 163 LNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKS 242 (412)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHH
Confidence 7777766666666677777766543222211111000000 00000000000000000 0000001111 1223
Q ss_pred hhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCC-Cch----hHHHHHHHHHHHHHHHHHHHhhhccCChhHH
Q 009099 334 LFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGI-ESD----VAASALVGAANVFGTAVASSLMDRQGRKNLL 408 (543)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 408 (543)
..+++... -..+++....+++..+..|...+.++... +.. +..-....+.+.++.+..|++..++.+..-+
T Consensus 243 ~y~~~~ll----~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l 318 (412)
T PF01770_consen 243 CYSNPRLL----LWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGEL 318 (412)
T ss_pred HhcCchHH----HHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHH
Confidence 33333322 22344445555677888888877777611 111 2344445566677788888886666554434
Q ss_pred HHHHHHH--HHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHH
Q 009099 409 TFSFTGM--AASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISN 486 (543)
Q Consensus 409 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 486 (543)
..+..-. +..++++... .+.+......+++...+..... +...-++.....+.-|..+|+.+++..+-.
T Consensus 319 ~l~~~S~l~a~~L~lm~~t--------~~Iwv~Y~~yIif~~~y~fliT-iA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 319 ALGVFSLLQAGLLFLMSFT--------GNIWVCYAGYIIFRSLYMFLIT-IASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 3333322 2223333222 1334444444555555443222 222233333444555666666655444433
No 159
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.31 E-value=3.1e-11 Score=119.98 Aligned_cols=158 Identities=15% Similarity=0.078 Sum_probs=132.4
Q ss_pred hhHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHH
Q 009099 125 GALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (543)
Q Consensus 125 ~~~~~i~~~-~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 203 (543)
...|.+.++ +|.+.... |++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++.++.++.+.+.++.++
T Consensus 244 ~~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 244 VLYPALADEVWQMGAAQI--GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HhhHHHHHhccCCChhHh--HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 345655555 89988888 999999999999999999999999888888888888888888888888888888889999
Q ss_pred HhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHH-HHhcccC
Q 009099 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA-LGMGLSP 282 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~ 282 (543)
.|++.+...+...+++.|..|++.|+++++++.....+|..+|+.+.+.+.+. .|++..+++.++..++.. +....++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM-MTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99998877777788999999999999999999999999999999999999876 788888887776665544 3444445
Q ss_pred CCh
Q 009099 283 ESP 285 (543)
Q Consensus 283 e~~ 285 (543)
|.+
T Consensus 401 ~~~ 403 (417)
T PRK10489 401 ELR 403 (417)
T ss_pred ccc
Confidence 543
No 160
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.30 E-value=2.1e-10 Score=115.51 Aligned_cols=157 Identities=12% Similarity=0.062 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYS 435 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (543)
......+.+.+.++++.+.... ......++..++.++.|+++||+|||+.+..+.++.+++.++..+.. +
T Consensus 52 ~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--------s 123 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS--------S 123 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc--------C
Confidence 3445556777788888877654 44556677888999999999999999999888877777766665531 1
Q ss_pred chhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH---------hhccccch
Q 009099 436 GTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN---------KFGISTVY 506 (543)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~---------~~g~~~~~ 506 (543)
....++..++.+.+.+ ...+ ...++.|.+|+++||.++|+.+...++|+.+++.+.+.+.. ..||+..|
T Consensus 124 ~~~l~~~r~l~G~~~~-~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f 201 (476)
T PLN00028 124 ATGFIAVRFFIGFSLA-TFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAF 201 (476)
T ss_pred HHHHHHHHHHHHHHHH-hhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHH
Confidence 2222333333343333 2222 23367899999999999999998888888888776655432 14799999
Q ss_pred hhhhHHHHHHHHhhheec
Q 009099 507 LGFATVCLLAVLYIAVNV 524 (543)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~ 524 (543)
.+.+++.++..++.+++.
T Consensus 202 ~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 202 FVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 988888776665555443
No 161
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.29 E-value=9.4e-11 Score=115.90 Aligned_cols=155 Identities=16% Similarity=0.110 Sum_probs=114.7
Q ss_pred HHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHH
Q 009099 365 STSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLG 442 (543)
Q Consensus 365 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (543)
+|.+.++++.+.... ....+.++..++.++.|+++||+|||+.+..+..+..++.++.... .+....++.
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--------~~~~~l~~~ 110 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT--------TSMTQFLIA 110 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc--------CCHHHHHHH
Confidence 445556677766544 5566678888999999999999999999999888877777766553 122333444
Q ss_pred HHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhhe
Q 009099 443 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
-++.+.+.+ ...+....++.|.+|++++++++++.+....++..++|.+.+.+.+..||+..|++.+++.++..+..++
T Consensus 111 r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 111 RFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 444444332 2233445578899999999999999999999999999999999988889999999988887777665555
Q ss_pred ecccCC
Q 009099 523 NVVETK 528 (543)
Q Consensus 523 ~~~~~~ 528 (543)
..||++
T Consensus 190 ~lp~~~ 195 (413)
T PRK15403 190 AMPETV 195 (413)
T ss_pred hCCCCc
Confidence 556543
No 162
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.29 E-value=8.4e-11 Score=116.10 Aligned_cols=152 Identities=16% Similarity=0.103 Sum_probs=117.9
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhh-hhhHHHHHHHHHHHH-----hhhHHHH
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ-LDAVPLAAGAFLCAT-----AQSVQTM 197 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~-----~~~~~~l 197 (543)
....|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+.+. .+.+..+++.+...+ .++.+.+
T Consensus 242 ~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 319 (402)
T TIGR00897 242 AVFLPMFVAELGFSTSEW--LQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVA 319 (402)
T ss_pred HHHHHHHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHH
Confidence 345677778899998887 89999999999999999999999999988764 333444444333332 2466777
Q ss_pred HHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 198 IIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 198 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
++..++.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+. .||+..|++.++..++..+.
T Consensus 320 ~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 320 LIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-FGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHH
Confidence 7888899988876544 4456677655 5799999999999999999999999999876 78999999998887766555
Q ss_pred hcc
Q 009099 278 MGL 280 (543)
Q Consensus 278 ~~~ 280 (543)
..+
T Consensus 397 ~~~ 399 (402)
T TIGR00897 397 TAF 399 (402)
T ss_pred HHH
Confidence 444
No 163
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.29 E-value=4.2e-11 Score=122.08 Aligned_cols=145 Identities=20% Similarity=0.100 Sum_probs=113.9
Q ss_pred hhHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh--hhHHHHHHHH
Q 009099 125 GALEYLA-KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA--QSVQTMIIGR 201 (543)
Q Consensus 125 ~~~~~i~-~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~l~~~r 201 (543)
..+|.+. +++|.+..+. +++.+.+.++..++.++.|+++||+|||+++..+.++..+..++.... .+.+.+.+..
T Consensus 296 ~~lp~~l~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTV--ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 3556555 6899998888 999999999999999999999999999999888877766665544333 3444454555
Q ss_pred HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
++.++......+....++.|.+|+++|++++++......+|..+||++++.+.+. .||+..+.+.+....
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~-~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR-LDLGTALASLSFSLT 443 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc-CChHHHHHHHHHHHH
Confidence 5554444445566778899999999999999999999999999999999999876 789988866554443
No 164
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=3.2e-11 Score=112.07 Aligned_cols=177 Identities=12% Similarity=0.048 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASM 419 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 419 (543)
.++++.++.....+..--.+..-.|.+.++.+++..+. +.+...+..-++.++.|.++||.+.|..+..++++.++..
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~n 108 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVN 108 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHH
Confidence 33444444444444445556666788888877877755 6677788899999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhh--HHHH
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYF--LSVV 497 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~--g~~~ 497 (543)
+++.+.. +.....+...+-+.+.+.++.|..- .+..-+|+++||+..++.|+..|+|+.+.|++. +.+.
T Consensus 109 il~Gfs~--------s~~~~~~l~~lng~fQg~Gwpp~~~-~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 109 ILFGFSP--------SLFLFAVLWVLNGWFQGMGWPPCAR-TITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHhhhh--------HHHHHHHHHHHHHHHhcCCCcHHHH-HHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 9998752 2233344445555556666666655 778999999999999999999999999999999 8999
Q ss_pred HhhccccchhhhhHHHHHHHHhhheecccC
Q 009099 498 NKFGISTVYLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 498 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
++.+|+..|++-++++++..++.++..+++
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999988888777766654
No 165
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.29 E-value=1.5e-10 Score=117.44 Aligned_cols=159 Identities=18% Similarity=0.076 Sum_probs=117.5
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh--hH-H-HHHH
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SV-Q-TMII 199 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~-~-~l~~ 199 (543)
....|.+.+++|.+.... .+......+...++.++.|+++||+|||++++.+.++.+++.++++... +. + ....
T Consensus 291 ~~~~p~i~~~~g~~~~~~--~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIA--LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 345688888899887766 6777778888899999999999999999999999999998887766432 21 1 2223
Q ss_pred HHHHHhhhccc-cccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhc------ccCCCCCchHHHHHHhHHHHH
Q 009099 200 GRVLAGIGIGI-SSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL------PLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 200 ~r~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~------~l~~~~~~wr~~f~~~~~~~~ 272 (543)
+.++.+++.+. ..+....++.|.+|+++|++++++......+|.++++.+.+ ++.+. .+|++.|++.+++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH-FHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh-ccCccHHHHHHHHHH
Confidence 34444444443 23667889999999999999999999998888887755543 33333 788989988887777
Q ss_pred HHHHHhcc-cCCCh
Q 009099 273 LLALGMGL-SPESP 285 (543)
Q Consensus 273 ~~~~~~~~-~~e~~ 285 (543)
+.++..++ .||++
T Consensus 448 ~~~~~~~~~~~e~~ 461 (479)
T PRK10077 448 LAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHhccccCC
Confidence 66555443 46654
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.29 E-value=7.8e-11 Score=115.54 Aligned_cols=161 Identities=17% Similarity=0.123 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 009099 359 NAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSG 436 (543)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (543)
.......|.+.+++|.+.... ......++..++.++.|++.||+|||+.+..+..+.+++.+++.+. .+.
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~--------~~~ 91 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS--------SSY 91 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh--------CcH
Confidence 445556677778888876644 6677788999999999999999999999999998888888777654 122
Q ss_pred hhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHH
Q 009099 437 TLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLA 516 (543)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 516 (543)
+..++..++.+.+.+. ..+....++.+.+|+++|+.++++......++..++|.+.+.+.+..||++.|.+.+++.++.
T Consensus 92 ~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 170 (382)
T PRK10091 92 LMLAIGRLVSGFPHGA-FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAV 170 (382)
T ss_pred HHHHHHHHHHHhhhHH-HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHH
Confidence 3333334444433332 233444567888998889999999999999999999999999999999999999888877666
Q ss_pred HHhhheecccCC
Q 009099 517 VLYIAVNVVETK 528 (543)
Q Consensus 517 ~~~~~~~~~~~~ 528 (543)
.+..++..|+.+
T Consensus 171 ~~~~~~~lp~~~ 182 (382)
T PRK10091 171 LASIYFWVPDIR 182 (382)
T ss_pred HHHHHHhCCCCC
Confidence 555555556543
No 167
>PRK10504 putative transporter; Provisional
Probab=99.28 E-value=1.4e-10 Score=117.22 Aligned_cols=161 Identities=14% Similarity=0.020 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 357 GINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
....+..+.|.+.+++|.+.... ......++..++.++.|+++||+|||+.+..+..+..++.+++.+. .
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--------~ 96 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS--------G 96 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh--------C
Confidence 34556667888888888887654 4455667778899999999999999999988877777766655442 1
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHH
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCL 514 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 514 (543)
+.+..++..++.+.+.+. ..+....++.|.+|++.|+++.|+.+...++|..++|.+.|.+.+..||++.|.+...+..
T Consensus 97 ~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 97 TLNELLLARVLQGVGGAM-MVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred CHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 223333334444444332 3455566788999999999999999999999999999999999999999999988777766
Q ss_pred HHHHhhheeccc
Q 009099 515 LAVLYIAVNVVE 526 (543)
Q Consensus 515 ~~~~~~~~~~~~ 526 (543)
+..++.....++
T Consensus 176 l~~~~~~~~~~~ 187 (471)
T PRK10504 176 IGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHhCCC
Confidence 666555544443
No 168
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.28 E-value=3.6e-11 Score=116.71 Aligned_cols=158 Identities=16% Similarity=0.166 Sum_probs=118.3
Q ss_pred hHHHHHHHH-HHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 358 INAVVYYST-SVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 358 ~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
........+ .+.++++.+.... ......++..++.++.|+++||+|||+.+..+.++.+++.++..+. .
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------~ 83 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--------S 83 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--------h
Confidence 334444555 5666777766644 5666778899999999999999999999999998888885555432 1
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHH
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCL 514 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 514 (543)
+.+..++..++.+.+.+ ...+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+|+..|++.+++.+
T Consensus 84 ~~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~ 162 (352)
T PF07690_consen 84 NFWLLLIARFLLGIGSG-FFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSL 162 (352)
T ss_dssp CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHH
T ss_pred hHHHHhhhccccccccc-cccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhh
Confidence 22334444444444433 34556666899999999999999999999999999999999999988999999999999888
Q ss_pred HHHHhhheec
Q 009099 515 LAVLYIAVNV 524 (543)
Q Consensus 515 ~~~~~~~~~~ 524 (543)
+..++...+.
T Consensus 163 ~~~il~~~~~ 172 (352)
T PF07690_consen 163 IAAILFILFL 172 (352)
T ss_dssp HHHHHHHCCC
T ss_pred hhhhhHhhhh
Confidence 8876533333
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.28 E-value=1.4e-10 Score=114.88 Aligned_cols=178 Identities=16% Similarity=0.126 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHH
Q 009099 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASM 419 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 419 (543)
...+...+..+........+....+.+.++++.+.... ......++..++.++.|+++||+|||+.+..+..+..++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~ 92 (406)
T PRK15402 13 LFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTC 92 (406)
T ss_pred HHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 33333333333333333434444566677888876644 5566778888999999999999999999998887777777
Q ss_pred HHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 420 LLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
+.+.... +.+..++..++.+.+.+ ...+....++.|.+|++.++++.++......++..++|.+.+.+.+.
T Consensus 93 ~~~~~~~--------~~~~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 163 (406)
T PRK15402 93 LAILLAQ--------SIEQFTLLRFLQGIGLC-FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV 163 (406)
T ss_pred HHHHHHc--------cHHHHHHHHHHHHhHhh-hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6665531 12223333333333332 22345556778999999999999999988889999999999999998
Q ss_pred hccccchhhhhHHHHHHHHhhheecccCC
Q 009099 500 FGISTVYLGFATVCLLAVLYIAVNVVETK 528 (543)
Q Consensus 500 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (543)
.+|+..+++.+++.+++.+..++..|+++
T Consensus 164 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 164 LPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999998888887776665555556543
No 170
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=2.9e-10 Score=114.75 Aligned_cols=155 Identities=12% Similarity=0.145 Sum_probs=118.5
Q ss_pred hHHHHHHHcCCCcchhhHHHHHH-HHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH---HHh-hhHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVS-SLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---ATA-QSVQTMIIG 200 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s-~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~l~~~ 200 (543)
..|++.+++|.+.++. +++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.
T Consensus 245 ~~~~l~~~~G~s~~~~--g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~ 322 (491)
T PRK11010 245 TTTFLIRGVGFDAGEV--GLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAA 322 (491)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 4566677899999888 99874 5568999999999999999999988777666555544332 333 455555556
Q ss_pred HHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcc
Q 009099 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL 280 (543)
Q Consensus 201 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 280 (543)
-++..++.|...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+. .||+..|.+.++.+++..+...+
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-~G~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-HGWPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHH
Confidence 66655555555566778888999999899999999999999988887788888876 78999999888888776666555
Q ss_pred cCC
Q 009099 281 SPE 283 (543)
Q Consensus 281 ~~e 283 (543)
+++
T Consensus 402 ~~~ 404 (491)
T PRK11010 402 CRQ 404 (491)
T ss_pred HHh
Confidence 443
No 171
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.27 E-value=2.1e-10 Score=113.21 Aligned_cols=180 Identities=16% Similarity=0.107 Sum_probs=121.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHH
Q 009099 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMA 416 (543)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 416 (543)
.++..++.........+. ........|.+.++++.+.... ......++..++.++.|+++||+|||+.+..+..+..
T Consensus 6 ~~~~l~~~~~~~~~~~~~-~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~ 84 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMA-QTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFI 84 (394)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 334444443333333222 2333334566777888877644 5566778889999999999999999999998888777
Q ss_pred HHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHH
Q 009099 417 ASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSV 496 (543)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 496 (543)
++.+...... +.+..++..++.+.+.+. ..+....+..|.++.+.++.+.+..+....++..++|.+.+.+
T Consensus 85 ~~~~~~~~~~--------~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 155 (394)
T PRK11652 85 LGTLVALFAH--------SLTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLL 155 (394)
T ss_pred HHHHHHHHHc--------cHHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776655431 122233333333333221 2334444677888888899999999999999999999999999
Q ss_pred HHhhccccchhhhhHHHHHHHHhhheecccCC
Q 009099 497 VNKFGISTVYLGFATVCLLAVLYIAVNVVETK 528 (543)
Q Consensus 497 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (543)
.+..||+..|.+.+++.++..++..++.+|++
T Consensus 156 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 156 TTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99899999998877766655544444455543
No 172
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.27 E-value=1.4e-10 Score=113.17 Aligned_cols=159 Identities=14% Similarity=-0.019 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccch
Q 009099 360 AVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGT 437 (543)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (543)
......|.+..+.+.+.... ......++.+++.++.|+++||+|||+.+..+..+..++.+++.+..... ..+.+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 93 (365)
T TIGR00900 17 ITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG---GLNIW 93 (365)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC---CCcHH
Confidence 33344455556666665543 55667788889999999999999999999988887777766665542110 01223
Q ss_pred hHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHH
Q 009099 438 LAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAV 517 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 517 (543)
...+...+.+.+.+ ...+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..||+..|++.++..++..
T Consensus 94 ~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 172 (365)
T TIGR00900 94 QVYVLAGILAIAQA-FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISA 172 (365)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33333444443333 23455666889999999999999999999999999999999999999999999888777666655
Q ss_pred Hhhhe
Q 009099 518 LYIAV 522 (543)
Q Consensus 518 ~~~~~ 522 (543)
++.+.
T Consensus 173 ~~~~~ 177 (365)
T TIGR00900 173 LLIVS 177 (365)
T ss_pred HHHHh
Confidence 44433
No 173
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.27 E-value=2.2e-10 Score=112.81 Aligned_cols=157 Identities=15% Similarity=0.081 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccch
Q 009099 360 AVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGT 437 (543)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (543)
..++...++.++.|.+.... ......+...+..++.|+++||+|||+.+..+..+.+++.+.+... .+.+
T Consensus 29 ~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--------~~~~ 100 (400)
T PRK11646 29 VFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA--------HEPW 100 (400)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--------ccHH
Confidence 33444444456678776655 4444567777778999999999999999999998888888777653 1223
Q ss_pred hHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHH
Q 009099 438 LAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAV 517 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 517 (543)
...+...+.+.+.+ ...+...+++.|..|+++|++++|+.+...++|..++|.+.+.+. ..||+..|++.+++.++..
T Consensus 101 ~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~ 178 (400)
T PRK11646 101 LLWLSCILSGLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAA 178 (400)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 33333333333332 234455567889999999999999999999999999999999998 6789998888777766655
Q ss_pred Hhhheeccc
Q 009099 518 LYIAVNVVE 526 (543)
Q Consensus 518 ~~~~~~~~~ 526 (543)
++..++.++
T Consensus 179 i~~~~~~~~ 187 (400)
T PRK11646 179 AFNAWLLPA 187 (400)
T ss_pred HHHHHhCCc
Confidence 544444444
No 174
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.26 E-value=5.8e-11 Score=120.78 Aligned_cols=162 Identities=18% Similarity=0.095 Sum_probs=109.7
Q ss_pred hhHHHHHHHcCCCcchhh---------HHH-HHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhh-
Q 009099 125 GALEYLAKDLGIAENTVL---------QGW-IVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS- 193 (543)
Q Consensus 125 ~~~~~i~~~~~~s~~~~~---------~g~-~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~- 193 (543)
...|.+.++.|.+..... ... ...+..++..++.++.++++||+|||++++++..+.+++.++.++..+
T Consensus 309 ~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~ 388 (502)
T TIGR00887 309 LNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH 388 (502)
T ss_pred cccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 346777788887654320 001 233444566678889999999999999998888888777666554321
Q ss_pred ---HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCC---------CchH
Q 009099 194 ---VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP---------LWWR 261 (543)
Q Consensus 194 ---~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---------~~wr 261 (543)
...+...-+...++..+..+....+.+|.+|.+.|++++++.+....+|.++++.+.+.+.+.. .++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 468 (502)
T TIGR00887 389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMG 468 (502)
T ss_pred cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccch
Confidence 1111111111222222344566677899999999999999999999999999999888876531 3456
Q ss_pred HHHHHhHHHHHHHHHHhcccCCChh
Q 009099 262 TMFGLAAIPSILLALGMGLSPESPR 286 (543)
Q Consensus 262 ~~f~~~~~~~~~~~~~~~~~~e~~~ 286 (543)
..|++.++..++..+..+++||++.
T Consensus 469 ~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 469 HVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHHHHHHheEeccCCC
Confidence 6777777777766666667788754
No 175
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.26 E-value=9.5e-12 Score=116.67 Aligned_cols=180 Identities=12% Similarity=0.053 Sum_probs=137.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHH
Q 009099 348 ALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLS 425 (543)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 425 (543)
++....+..--+.+..-.+.+.+.++.++. +.+.....++..+.++++|++.||++|++++.+|..+..++.++..+.
T Consensus 39 ~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs 118 (493)
T KOG1330|consen 39 CLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS 118 (493)
T ss_pred HHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH
Confidence 333333333344444445555555565555 447777888999999999999999999999999999999998888876
Q ss_pred HhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc-ccc
Q 009099 426 FTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG-IST 504 (543)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g-~~~ 504 (543)
. ..|..++.-.+.+.|-. .+.++...+++|.+|..+|++++++++....+|..+|-.+.+.+.+..+ |++
T Consensus 119 ~--------~Fwq~~l~R~~vGiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 119 N--------HFWQVLLCRGFVGIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred H--------HHHHHHHHHHHhccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 2 22334444445444443 4677778899999999999999999999999999998888877777777 999
Q ss_pred chhhhhHHHHHHHHhhheecccCCCCCHHHHH
Q 009099 505 VYLGFATVCLLAVLYIAVNVVETKGRSLEEIE 536 (543)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (543)
.|...+++.+++.++..++.+|++++..+|.+
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~ 221 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVD 221 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccc
Confidence 99999999999999888888887765554443
No 176
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.26 E-value=1.3e-10 Score=114.08 Aligned_cols=144 Identities=15% Similarity=0.058 Sum_probs=120.0
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhh
Q 009099 127 LEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGI 206 (543)
Q Consensus 127 ~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 206 (543)
.|...+|.|.+..+. |.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|+
T Consensus 228 ~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 228 SAIYWQAAGYSASTI--GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 344446789988787 999999999999999999999999999999999999999988888889999999999999999
Q ss_pred hccccccchhhhhhccCCcccchhhhHHHH-HHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHH
Q 009099 207 GIGISSAIVPLYISEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (543)
Q Consensus 207 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 275 (543)
+.+...+....++.+. +++++++..++.. ...++|..+||.++|.+.+. .|+ ..|+..+++.++.+
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~-~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH-LGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccH-HHHHHHHHHHHHHH
Confidence 9998888888888887 5556788888876 55677889999999999876 566 46666666555443
No 177
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.25 E-value=2.9e-10 Score=112.37 Aligned_cols=155 Identities=11% Similarity=0.075 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhcc-CChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 358 INAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQ-GRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 358 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
++.+..+++.++. ++|++.... ..........++.+++|+++||+ |||+.+.++.++..++.+++....
T Consensus 25 ~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~------- 97 (493)
T PRK15462 25 FYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE------- 97 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh-------
Confidence 4445555555543 467776644 45556677788899999999998 999999999998888876654320
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChh--hhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhH
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASR--IRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFAT 511 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~ 511 (543)
.......+...+...+.+. ..+...+++.|.+|++ .|.++.++.+...++|+.++|.+.+.+.+..||+..|.+.++
T Consensus 98 ~~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 98 IHPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred cchhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 0111122222233333222 2344556889999875 699999999999999999999999999999999999988766
Q ss_pred HHHHHHHhh
Q 009099 512 VCLLAVLYI 520 (543)
Q Consensus 512 ~~~~~~~~~ 520 (543)
..+++.+..
T Consensus 177 gm~l~li~~ 185 (493)
T PRK15462 177 GMIAGLVIF 185 (493)
T ss_pred HHHHHHHHH
Confidence 555554443
No 178
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=8.2e-11 Score=116.08 Aligned_cols=140 Identities=8% Similarity=0.067 Sum_probs=117.2
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccc
Q 009099 135 GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAI 214 (543)
Q Consensus 135 ~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 214 (543)
+.+.... |++.++..+...++.++.|++.||+|+|+.+.++.++.++...+...+++.+.+++.+++.|++.......
T Consensus 250 ~~~~~~~--g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVF--GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 3344445 88899988999999999999999999999999999999998888788899999999999999998766666
Q ss_pred hhhhhhccCCcccchhhhHH-HHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 215 VPLYISEISPTEIRGALGSV-NQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 215 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
...+..+..+++.++...+. .+....+|..++++++|++.+. .||+..|.+.++..++..+.
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-IGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 66677787888777776665 5678899999999999999876 79999999988887665543
No 179
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.24 E-value=2.2e-10 Score=110.92 Aligned_cols=161 Identities=12% Similarity=0.011 Sum_probs=113.4
Q ss_pred hHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYS 435 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (543)
........|.+.++++.+.... ......++..++.+..|+++||+|||+++.........+....... .+
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--------~~ 78 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP--------FN 78 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh--------cc
Confidence 3445566777778888887754 5555678888999999999999999887655443333332211110 12
Q ss_pred chhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHH
Q 009099 436 GTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLL 515 (543)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 515 (543)
....++.-++.+.+.+. .........|.+|+++|++++++.+....+|..+++.+.+.+.+..||+..|.+.+++.++
T Consensus 79 ~~~l~~~R~l~G~g~~~--~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~ 156 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF--LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAA 156 (368)
T ss_pred HHHHHHHHHHHHhHhHH--HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 23344444444444332 2233335578899999999999999999999999999999999999999999998888777
Q ss_pred HHHhhheecccCC
Q 009099 516 AVLYIAVNVVETK 528 (543)
Q Consensus 516 ~~~~~~~~~~~~~ 528 (543)
..++.++..||.+
T Consensus 157 ~~~~~~~~lp~~p 169 (368)
T TIGR00903 157 GIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHcCCCC
Confidence 7666666666643
No 180
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.23 E-value=1.7e-10 Score=115.79 Aligned_cols=152 Identities=16% Similarity=0.090 Sum_probs=104.2
Q ss_pred hhHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh--cccchh-hhhhHHHHHHHHHHHH--hhhHHHHH
Q 009099 125 GALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF--GRTRTF-QLDAVPLAAGAFLCAT--AQSVQTMI 198 (543)
Q Consensus 125 ~~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~--Grr~~~-~~~~~~~~i~~~~~~~--~~~~~~l~ 198 (543)
..+|. +++++|.+..+. +++...+.++..++.++.|+++||+ |||+.. +....+..++.++..+ ..+.+.++
T Consensus 274 ~~~P~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 351 (452)
T PRK11273 274 DWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDM 351 (452)
T ss_pred HHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHH
Confidence 35555 445578887777 8999999999999999999999999 455432 2222333333332222 23444455
Q ss_pred HHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHH-HHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGIL-AALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 199 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
++.++.|.+..........+..|.+|+++||+++|+.+....+|.. ++|.+.+.+.+. .||+..|++.++.+++.++.
T Consensus 352 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~-~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 352 ACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-FGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-hcchHHHHHHHHHHHHHHHH
Confidence 5555566543332233345677999999999999999888778754 578888888876 68999999888777665554
Q ss_pred hc
Q 009099 278 MG 279 (543)
Q Consensus 278 ~~ 279 (543)
..
T Consensus 431 ~~ 432 (452)
T PRK11273 431 LI 432 (452)
T ss_pred HH
Confidence 43
No 181
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.23 E-value=2.2e-10 Score=113.55 Aligned_cols=169 Identities=14% Similarity=0.020 Sum_probs=141.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhccc--chhhhhhHHHHHHHHHHHH
Q 009099 113 AILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRT--RTFQLDAVPLAAGAFLCAT 190 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~ 190 (543)
.+.++. .++......+..+++|++..+. ..+.-+..+..++|.+++|++.||+|.| ++++++++++.+..+...+
T Consensus 292 l~~dg~-~ti~~~~~i~a~~~lg~s~~~l--~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 292 LYSDGV-NTIISFAGIYATEVLGMSTTQL--IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLF 368 (477)
T ss_pred HHHHHH-HHHHHHHHHHHHHhcCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHH
Confidence 334444 3344556667777999999988 7888888888999999999999999999 8988888888666665555
Q ss_pred --------hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 191 --------AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 191 --------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
.++-+.+.+.-++.|++.|..++...++.++..|+++.+..+|++....-....+||++.+.+.+...+-|+
T Consensus 369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~ 448 (477)
T PF11700_consen 369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRY 448 (477)
T ss_pred HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 578888999999999999999999999999999999999999999999999999999999999877566899
Q ss_pred HHHHhHHHHHHHHHHhcccCCC
Q 009099 263 MFGLAAIPSILLALGMGLSPES 284 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~~e~ 284 (543)
.+....++.++.++++++++.+
T Consensus 449 g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 449 GFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHHHHHHHHHHhhccch
Confidence 8888887777777666665443
No 182
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.22 E-value=3.7e-10 Score=112.72 Aligned_cols=146 Identities=16% Similarity=0.225 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 357 GINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
......+..+.+.++.+.++... ......++..++.++.|+++||+|||+.+..+..+.+++.++..+..
T Consensus 33 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-------- 104 (426)
T PRK12307 33 DFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS-------- 104 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh--------
Confidence 34455556677777888876644 55667788899999999999999999999999988888887766641
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhH
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFAT 511 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~ 511 (543)
+.+..++.-++.+.+.+ ...+....++.|.+|+++|+++.++......+|.++++.+.+.+.+..+|+..|++...
T Consensus 105 ~~~~l~~~r~l~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 105 GVIMLTLSRFIVGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHHHHHHHHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 22333444444444333 23445555788999999999999999999999999999999988888899998876443
No 183
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.22 E-value=3.2e-10 Score=113.83 Aligned_cols=154 Identities=14% Similarity=0.098 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHH---cCCCchhH--HHHHHHHHHHHHHHHHHHhhhc-cCChhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009099 358 INAVVYYSTSVFRS---VGIESDVA--ASALVGAANVFGTAVASSLMDR-QGRKNLLTFSFTGMAASMLLLSLSFTWKVL 431 (543)
Q Consensus 358 ~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (543)
++....+++.++++ +|.+.... ......++..++.+++|+++|| +|||+.+..+..+.+++.+++.+..
T Consensus 26 ~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~----- 100 (475)
T TIGR00924 26 YYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI----- 100 (475)
T ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 45555556666544 57765544 5666778889999999999999 8999999999999888887776531
Q ss_pred ccccchhHHHHHHHHHHHhhcCcccccccccccccChhh---hhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhh
Q 009099 432 APYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRI---RAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLG 508 (543)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~ 508 (543)
+.+...+...+.+.+.+ ...+....++.+.+|++. |+++.++.+...++|.+++|.+.+.+.++.||+..|.+
T Consensus 101 ---~~~~~~~~~~l~g~g~g-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~ 176 (475)
T TIGR00924 101 ---YPDLIFYGLGTIAVGSG-LFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNL 176 (475)
T ss_pred ---cHhHHHHHHHHHHhccc-cccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 11223333333333322 234555667888887653 88899999999999999999999999999999999988
Q ss_pred hhHHHHHHHHhh
Q 009099 509 FATVCLLAVLYI 520 (543)
Q Consensus 509 ~~~~~~~~~~~~ 520 (543)
.++.++++.++.
T Consensus 177 ~~~~~~~~~l~~ 188 (475)
T TIGR00924 177 AAVGMVIGLLTF 188 (475)
T ss_pred HHHHHHHHHHHH
Confidence 776655554443
No 184
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.22 E-value=7.4e-11 Score=115.76 Aligned_cols=161 Identities=12% Similarity=0.059 Sum_probs=119.2
Q ss_pred hHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYS 435 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (543)
........|.+.++++.+.... ......++..++.++.|+++||+|||+.+..+..+..++.+++.+.. +
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~ 82 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST--------S 82 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh--------h
Confidence 4455556677777778876644 56677888899999999999999999999999888888887776641 2
Q ss_pred chhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHH-hhHHHHHhhccccchhhhhHHHH
Q 009099 436 GTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGL-YFLSVVNKFGISTVYLGFATVCL 514 (543)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~-~~g~~~~~~g~~~~~~~~~~~~~ 514 (543)
.+..++..++.+.+.+ ...+....++.|.+|+++|+++.++.+....+|..++|. +.+.+.+..+|+..|++.+++.+
T Consensus 83 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 83 LWVMAALWALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred HHHHHHHHHHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 2333333333333333 345566668899999999999999999999999999994 66666677889998888887777
Q ss_pred HHHHhhheecccC
Q 009099 515 LAVLYIAVNVVET 527 (543)
Q Consensus 515 ~~~~~~~~~~~~~ 527 (543)
+..++.+++.++.
T Consensus 162 ~~~~~~~~~~~~~ 174 (379)
T TIGR00881 162 IVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHheeeCCC
Confidence 6666555555543
No 185
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.21 E-value=4.6e-10 Score=112.75 Aligned_cols=152 Identities=14% Similarity=0.108 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhc-cCChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDR-QGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
|........++.++++.+.... ....+.....+..+++|+++|| +|||+++..+.++..++.+.+.+...
T Consensus 31 y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~------- 103 (489)
T PRK10207 31 YGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLL------- 103 (489)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 3333334444445677776654 3334445555666789999999 99999999999999998888776411
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChh--hhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHH
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASR--IRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATV 512 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~ 512 (543)
......+...+.+.+.+ ...+...+++.|.+|++ +|+.++++.+...++|.+++|.+.|.+.++.||++.|++.++.
T Consensus 104 ~~~ll~~~~~l~~ig~g-~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 104 KPDLIFIALGTIAVGNG-LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred chhHHHHHHHHHHhccc-cccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH
Confidence 11112233333333332 24455567899999877 4577999999999999999999999999999999999886554
Q ss_pred HHHHH
Q 009099 513 CLLAV 517 (543)
Q Consensus 513 ~~~~~ 517 (543)
.+++.
T Consensus 183 ~~~~~ 187 (489)
T PRK10207 183 LIIAL 187 (489)
T ss_pred HHHHH
Confidence 44433
No 186
>PRK11043 putative transporter; Provisional
Probab=99.21 E-value=6.3e-10 Score=110.06 Aligned_cols=152 Identities=16% Similarity=0.137 Sum_probs=109.8
Q ss_pred HHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHH
Q 009099 365 STSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLG 442 (543)
Q Consensus 365 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (543)
.+.+.++++.+.... ......++..++.++.|+++||+|||+.+..+..+..++.++..+.. +.+..++.
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~ 100 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--------SAAQLLVL 100 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--------CHHHHHHH
Confidence 344567778776654 55667788899999999999999999999988877777776665431 22223333
Q ss_pred HHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhhe
Q 009099 443 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
.++.+.+.+. ..+....++.|.+|++.++...+..+....++..++|.+.+.+.+..||+..|.+.+++.++..++.+.
T Consensus 101 ~~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 101 RFVQAVGVCS-AAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHhhhHH-HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 3333333221 223334567889999889999999999999999999999999999999999988887777766655544
Q ss_pred ecc
Q 009099 523 NVV 525 (543)
Q Consensus 523 ~~~ 525 (543)
..+
T Consensus 180 ~~~ 182 (401)
T PRK11043 180 LKP 182 (401)
T ss_pred cCC
Confidence 433
No 187
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.20 E-value=2.6e-10 Score=111.90 Aligned_cols=157 Identities=13% Similarity=0.091 Sum_probs=117.4
Q ss_pred HHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhH
Q 009099 362 VYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLA 439 (543)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (543)
....+.+.++++.+.... ......++..++.++.|++.||+|||+.+..+..+..++.+.+.+.. +.+..
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~ 82 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--------TIDQL 82 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--------cHHHH
Confidence 344566667778876644 55667788899999999999999999999999888888877776541 12233
Q ss_pred HHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHh
Q 009099 440 VLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLY 519 (543)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 519 (543)
.+..++.+.+.+ ...+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..||+..|.+.+++.++..++
T Consensus 83 ~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 83 IYMRFLHGLAAA-AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 333333333333 2334455678899999999999999999999999999999999999999999998888777776665
Q ss_pred hheecccC
Q 009099 520 IAVNVVET 527 (543)
Q Consensus 520 ~~~~~~~~ 527 (543)
..+..+|+
T Consensus 162 ~~~~~~~~ 169 (377)
T PRK11102 162 VFFFIPET 169 (377)
T ss_pred HHHhCCcc
Confidence 55555543
No 188
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.19 E-value=7.4e-10 Score=111.89 Aligned_cols=152 Identities=16% Similarity=0.107 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHH-HHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhc-cCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 358 INAVVYYSTSVF-RSVGIESDVA--ASALVGAANVFGTAVASSLMDR-QGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 358 ~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
++.+..+++.++ +++|.+.... .............+++|+++|| +|||+.+..+..+..++.+++.+...
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~------ 110 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGH------ 110 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 334444444444 6678877654 2222333333445689999999 59999999999888888776665310
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhh--hhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhH
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRI--RAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFAT 511 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~ 511 (543)
......+...+.+.+.+. ..+....++.|.+|++. +..+.++.+...++|..++|.+.|++.+..||+..|.+.++
T Consensus 111 -~~~~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i 188 (500)
T PRK09584 111 -DAGIVYMGMATIAVGNGL-FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV 188 (500)
T ss_pred -cHHHHHHHHHHHHHhhhc-ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 112222333334433332 34455567889987543 45688899999999999999999999999999999988776
Q ss_pred HHHHHH
Q 009099 512 VCLLAV 517 (543)
Q Consensus 512 ~~~~~~ 517 (543)
..+++.
T Consensus 189 ~~~i~~ 194 (500)
T PRK09584 189 GMLITV 194 (500)
T ss_pred HHHHHH
Confidence 555444
No 189
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.18 E-value=3.6e-10 Score=113.21 Aligned_cols=151 Identities=23% Similarity=0.208 Sum_probs=134.4
Q ss_pred hhhHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHH
Q 009099 124 NGALEYLA-KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRV 202 (543)
Q Consensus 124 ~~~~~~i~-~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~ 202 (543)
..++|.+. +++|.+...+ |++.+++.+|..++.++.+++.+|+++++++..+.++++++.+..+++++.+..+++.+
T Consensus 238 ~aLlPl~a~~~l~~~a~~y--Gll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~ 315 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGY--GLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALF 315 (524)
T ss_pred HHhhhHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 34677665 5689888888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 203 LAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 203 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
+.|++.........+.+.+..|++.||++++++.+....+..+|.++.|.+.+. .|-+..+.+.++..++..++
T Consensus 316 l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~-~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 316 LAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH-FGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHH
Confidence 999999988888889999999999999999999999999999999999999876 78888888777655554443
No 190
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.18 E-value=1.6e-08 Score=97.66 Aligned_cols=315 Identities=17% Similarity=0.080 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcc
Q 009099 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTE 226 (543)
Q Consensus 147 ~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 226 (543)
.++.+..+.+++++.+.+.|+.|+|+.++++...+....+..-+ +|-+.++++-.+.|+|.+..+..-..++++..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77778888899999999999999999999999998887766555 45667889999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhcccCCC-------CCchH--------------HHHHHhHHHHHHHHHHhcccCCCh
Q 009099 227 IRGALGSVNQLFICVGILAALVAGLPLAGN-------PLWWR--------------TMFGLAAIPSILLALGMGLSPESP 285 (543)
Q Consensus 227 ~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-------~~~wr--------------~~f~~~~~~~~~~~~~~~~~~e~~ 285 (543)
.+.+..++..+....+.++|..+-..+... ..+-+ ..+.+...+..+..+...+.|.+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 999999998888888888886655443211 01111 111111111112222223333321
Q ss_pred hHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHH
Q 009099 286 RWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYS 365 (543)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (543)
.....+..+....+.++ ...+++++++...+........+. ...+...|.
T Consensus 215 ~~~~~~~~~~~~~~~l~---------------------------~~~~l~~~~~ml~L~~~f~~tG~~---~Sf~~~iyp 264 (461)
T KOG3098|consen 215 VVNCKSSSETSFSELLK---------------------------LTFKLLKTPKMLLLFPFFFYTGLE---TSFWISIYP 264 (461)
T ss_pred hhhhhhhccccHHHHHH---------------------------HHHHHhcCHhHHHHHHHHHHHHHH---HHHHHhccc
Confidence 10000000000011000 112233344333333222222221 122223333
Q ss_pred HHHHH--HcCCCchhH---HHHHHHHHHHHHHHHHHHhhhc---cCChhHHHHHHHHHHHHHHHHHHHHhhcc-ccc---
Q 009099 366 TSVFR--SVGIESDVA---ASALVGAANVFGTAVASSLMDR---QGRKNLLTFSFTGMAASMLLLSLSFTWKV-LAP--- 433 (543)
Q Consensus 366 ~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~d~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 433 (543)
..+.- ..+.+.... .....+++.+++....+.+.+| +|+++.+.++..+..+++++.......+. ..+
T Consensus 265 t~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~ 344 (461)
T KOG3098|consen 265 TCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDS 344 (461)
T ss_pred hhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcc
Confidence 22221 223322222 4455677788888888888766 67788888888777777766655433221 001
Q ss_pred ------ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhH
Q 009099 434 ------YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFL 494 (543)
Q Consensus 434 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 494 (543)
......++...+.+.+-. .+....+.++.+.+| +.|..+.++.-.-..++..++-....
T Consensus 345 ~~~~~~~~~~~~~ii~~l~G~~D~-~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 345 PPLLFTPSYYLALIIGFLLGFGDA-CFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred cccccccchhHHHHHHHHHhhHHH-HHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 011122232333333322 344455557888885 56888888888888887766555444
No 191
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.18 E-value=2.3e-10 Score=114.34 Aligned_cols=160 Identities=16% Similarity=0.067 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchh
Q 009099 361 VVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTL 438 (543)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (543)
.....|.+.+ .+.+.... ......++..++.++.|+++||+|||+.+..+.++.+++.+++...... ..+...
T Consensus 46 ~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 120 (438)
T TIGR00712 46 FALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----TSSIAI 120 (438)
T ss_pred HHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc----cchHHH
Confidence 3444555544 57766644 5566778889999999999999999999888887777776665432110 001112
Q ss_pred HHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH-hhccccchhhhhHHHHHHH
Q 009099 439 AVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN-KFGISTVYLGFATVCLLAV 517 (543)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~ 517 (543)
..+..++.+.+.+.. .+.....+.|.+|+++|++++|+.+...++++.+++.+.+...+ ..+|+..|++.+++.++..
T Consensus 121 l~~~~~l~g~~~g~~-~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 121 MFVLLFLNGWFQGMG-WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVA 199 (438)
T ss_pred HHHHHHHHHHHhhcc-hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 222233334333332 33344467789999999999999999999999999988876554 4689999998888877766
Q ss_pred Hhhheeccc
Q 009099 518 LYIAVNVVE 526 (543)
Q Consensus 518 ~~~~~~~~~ 526 (543)
++.+++.+|
T Consensus 200 ~~~~~~~~~ 208 (438)
T TIGR00712 200 LFAFAMMRD 208 (438)
T ss_pred HHHHHhccC
Confidence 555555554
No 192
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.17 E-value=1.3e-09 Score=106.41 Aligned_cols=157 Identities=17% Similarity=0.144 Sum_probs=108.3
Q ss_pred hhHHHHHHHHH-HHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 357 GINAVVYYSTS-VFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 357 ~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
.......+.|. +.++++.+.... ......++.+++.++.|+++||+|||+.+..+.++..++.+++.+...
T Consensus 16 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~------ 89 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ------ 89 (366)
T ss_pred HHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh------
Confidence 34556666674 667788887754 566678889999999999999999999999999888888877765420
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh----------hccc
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK----------FGIS 503 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~----------~g~~ 503 (543)
+.+..++..++.+.+. +..+....++.|.+|+++|+.+.++.....++|..+++.+.+.+... .+|+
T Consensus 90 -~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~ 166 (366)
T TIGR00886 90 -SYSVLLLLRLFIGIAG--GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWG 166 (366)
T ss_pred -hHHHHHHHHHHHHHhc--hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 1222333333333332 22333455788999999999999999988888888888777766653 3688
Q ss_pred cch-hhhhHHHHHHHHhhhe
Q 009099 504 TVY-LGFATVCLLAVLYIAV 522 (543)
Q Consensus 504 ~~~-~~~~~~~~~~~~~~~~ 522 (543)
+.+ +..+++..+..++.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~ 186 (366)
T TIGR00886 167 WAFVIVPAGILLLPALLIFF 186 (366)
T ss_pred chhHHHHHHHHHHHHHHHHH
Confidence 887 4334444443333333
No 193
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.17 E-value=4.1e-09 Score=93.97 Aligned_cols=174 Identities=16% Similarity=0.058 Sum_probs=127.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
|..+......+...+. ...++..-|.+++.+|.++++. ..+.++-.+|..+ +++.|.+.|++|++.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l--~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSGT-TYTFSAYSPQLKSRLGYSQSQL--NTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcCc-ccchhhhhHHHHHHhCCCHHHH--HHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHH
Confidence 4444444444444443 3445667899999999999998 9999999999876 5889999999999999999999999
Q ss_pred HHHHHHHHh-------hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC
Q 009099 183 AGAFLCATA-------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (543)
Q Consensus 183 i~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 255 (543)
+|..+...+ .++|.+.+..++.|.+.+....++.....+.||. +||.+.|+.-...+++..+-..+...+.+
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 998877654 4678888888888888877777777777889985 59999999999999986655444444433
Q ss_pred CCCchHHHHHHhHHHHHHHHHHhcccC
Q 009099 256 NPLWWRTMFGLAAIPSILLALGMGLSP 282 (543)
Q Consensus 256 ~~~~wr~~f~~~~~~~~~~~~~~~~~~ 282 (543)
. ..-+..+.+...+.++.++..++++
T Consensus 157 ~-~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 157 D-DPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred C-ChHHHHHHHHHHHHHHHHHHhhhee
Confidence 3 3334444444444444444444543
No 194
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2.5e-10 Score=113.82 Aligned_cols=173 Identities=20% Similarity=0.191 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhc--ccchhhhhhHHHHHHH
Q 009099 108 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG--RTRTFQLDAVPLAAGA 185 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~ 185 (543)
...+...+..+........+|...++++.+..+. +.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.
T Consensus 302 ~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~a--a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 302 LLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDA--AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhh--HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 3344455555555666668899999999999998 99999999999999999999999998 5567788888889999
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHH
Q 009099 186 FLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFG 265 (543)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~ 265 (543)
+.+.++++++.++..-.+.|++.|........++.|..+.++-..+.|+.....+++.++||.+++.+.+...+|...|+
T Consensus 380 ~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~ 459 (509)
T KOG2504|consen 380 LFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFY 459 (509)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehh
Confidence 99999999999999999999999988888888999999999999999999999999999999999999888667999999
Q ss_pred HhHHHHHHHHHHhcccC
Q 009099 266 LAAIPSILLALGMGLSP 282 (543)
Q Consensus 266 ~~~~~~~~~~~~~~~~~ 282 (543)
..++..++..+..++.+
T Consensus 460 ~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 460 FCGLCFLLSAVLLLILR 476 (509)
T ss_pred hcChHHHHHHHHHHHhH
Confidence 99998888777666655
No 195
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.14 E-value=5.5e-10 Score=112.71 Aligned_cols=148 Identities=10% Similarity=0.028 Sum_probs=108.1
Q ss_pred cCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHH
Q 009099 372 VGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLS 449 (543)
Q Consensus 372 ~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (543)
++.+.... ......++.+++.++.|++.||+|+|+.+..+.++..++.++..+... ......++.-++.+.+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG------GGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH------cCchHHHHHHHHHHHh
Confidence 34444433 566677889999999999999999999999888777777666543211 0122333333333333
Q ss_pred hhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh-ccccchhhhhHHHHHHHHhhheeccc
Q 009099 450 FSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF-GISTVYLGFATVCLLAVLYIAVNVVE 526 (543)
Q Consensus 450 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (543)
.+ ...+....++.|.+|+++|++++|+.+....+|.++++.+.+.+.+.. ||+..|.+.+++.++..++.+.+.++
T Consensus 145 ~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 145 QG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred cc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 33 345566668999999999999999999999999999999999999884 99999999888777666555544443
No 196
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.14 E-value=5e-10 Score=92.56 Aligned_cols=134 Identities=19% Similarity=0.166 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccc
Q 009099 384 VGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLP 463 (543)
Q Consensus 384 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (543)
..++.+++.++.+++.||++||+.+..+..+..++.+.+... .+.+.......+.+.+.+ ...+....++.
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~ 77 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--------SNITVLIIARFLQGFGAA-FALVAGAALIA 77 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHH-HHHHhHHHHHH
Confidence 456788899999999999999999988887777776665543 122233333333333333 23455666788
Q ss_pred cccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheeccc
Q 009099 464 EIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVE 526 (543)
Q Consensus 464 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (543)
|..|+++|+++.++.+....++..++|.+.+.+.+..+++..+.+.+.+.++..+..+...+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999998888888888887777776666555443
No 197
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.13 E-value=8.5e-10 Score=110.07 Aligned_cols=153 Identities=16% Similarity=0.043 Sum_probs=97.6
Q ss_pred hHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH--H--hhhHHHHHHH
Q 009099 126 ALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA--T--AQSVQTMIIG 200 (543)
Q Consensus 126 ~~~-~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--~--~~~~~~l~~~ 200 (543)
.+| ++.+++|.+..+. ++..++..++..+++++.|+++||+|||+++.++.++.++..+... . .++....+..
T Consensus 265 ~lp~~l~~~~g~s~~~~--~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (432)
T PRK10406 265 YMQKYLVNTAGMHANVA--SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGL 342 (432)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 344 4556789887777 8888888888889999999999999999988776665444332221 1 1233322222
Q ss_pred HHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHH-HHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICV-GILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 201 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
-++.+++.+...+....++.|++|++.|+.++|+.+....+ .....|.+.+.+. ....|...++..++..++..+..+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHH
Confidence 22222333333445667889999999999999998765443 2334677766553 323466666666555555555444
Q ss_pred cc
Q 009099 280 LS 281 (543)
Q Consensus 280 ~~ 281 (543)
++
T Consensus 422 ~l 423 (432)
T PRK10406 422 ML 423 (432)
T ss_pred Hh
Confidence 44
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=99.12 E-value=2.1e-10 Score=117.19 Aligned_cols=139 Identities=19% Similarity=0.100 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhH--HHHHHHHHHHhhhccccccchhhhhhcc
Q 009099 145 WIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSV--QTMIIGRVLAGIGIGISSAIVPLYISEI 222 (543)
Q Consensus 145 ~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 222 (543)
+...+..+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34445566677888999999999999999999999999988888777644 4555566777777777788888999999
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCCChh
Q 009099 223 SPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (543)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~ 286 (543)
+|++.|+.++|+.+....+|.+++|.+.+ +. . .++...+++.++..++..+..+++||+..
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-E-KWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-H-HHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 99999999999999999999999999988 43 2 56777888888888777777778888653
No 199
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.12 E-value=7.8e-09 Score=101.20 Aligned_cols=162 Identities=10% Similarity=0.062 Sum_probs=103.5
Q ss_pred HHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccch
Q 009099 361 VVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGT 437 (543)
Q Consensus 361 ~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (543)
.....+.+.+ +++++..+. ...+..++..+.++..|++.||+|.|+++.++.++..+..+.+.+.... ...+..
T Consensus 53 ~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~---~~~s~~ 129 (462)
T PRK15034 53 FSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN---PNTPFG 129 (462)
T ss_pred HHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc---cCCCHH
Confidence 3333444433 578877655 5555677788889999999999999999999988888777766653110 001223
Q ss_pred hHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHH-----Hhhc-----------
Q 009099 438 LAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVV-----NKFG----------- 501 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~-----~~~g----------- 501 (543)
..++..++.+.+ .+..+.....+++.+|+++||+++|+....+++|..+++.+...+. +..|
T Consensus 130 ~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~ 207 (462)
T PRK15034 130 IFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSV 207 (462)
T ss_pred HHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccch
Confidence 334444444443 2244455557889999999999999997777777766555444322 3333
Q ss_pred --cccchhhhhHHHHHHHHhhheecccC
Q 009099 502 --ISTVYLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 502 --~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
++.+.++...+.++..++.+++.++.
T Consensus 208 ~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 208 MSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44455566666666666666555543
No 200
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=1.2e-09 Score=101.84 Aligned_cols=179 Identities=15% Similarity=0.061 Sum_probs=146.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH
Q 009099 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (543)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 182 (543)
-.+.++..-..+.++.+.. +.....+-+.++|++..+. ..+.-.-.+..+++++++|++.||+|.|+++.+++++..
T Consensus 253 ~i~~FLiA~~~~~DGv~ti-l~~~~~fg~~~~gls~~~l--ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTI-LAMGGVFGAADLGLSSTEL--LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred chHHHHHHHHHHHhhHHHH-HHHHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence 3444455555566666443 3444455566999999888 888888888889999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHH
Q 009099 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (543)
Q Consensus 183 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~ 262 (543)
+.++..-+...-..+.++-.+.|.+.|+.+..+.++..+..|+++-++.+|+++...-.+..+||.+.+.+.+.+..-|.
T Consensus 330 ~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~ 409 (438)
T COG2270 330 IAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRA 409 (438)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhh
Confidence 98888777766666777778999999999999999999999999999999999999999999999999988876667788
Q ss_pred HHHHhHHHHHHHHHHhcccCCC
Q 009099 263 MFGLAAIPSILLALGMGLSPES 284 (543)
Q Consensus 263 ~f~~~~~~~~~~~~~~~~~~e~ 284 (543)
-+....++..+..+..+.+|+.
T Consensus 410 g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 410 GVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHHhhHhhEEeecCC
Confidence 8877777776666666666654
No 201
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.11 E-value=1.6e-09 Score=106.75 Aligned_cols=149 Identities=18% Similarity=0.077 Sum_probs=112.6
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHH-HHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH------hhhHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLA-GATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT------AQSVQTMI 198 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~------~~~~~~l~ 198 (543)
..+.+.+|.|.+.++. |++...... ...++.++.|++.||+|+|+.+..+.++.++..+.... .++...++
T Consensus 230 ~~~~~l~~~G~s~~~i--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWI--GRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 3444556689999888 998888764 66677899999999999999988877766443332221 12334445
Q ss_pred HHHHHHhhhccccccchhhhhhccCCc-ccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 199 IGRVLAGIGIGISSAIVPLYISEISPT-EIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 199 ~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
...++.+++.+...+.....+.+..++ +++++.+++.+...++|..++|.++|.+.+. .||+..|++.+++.++..+.
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-FGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHH
Confidence 555666777777777777787777776 7789999999999999999999999999876 78999998887766665443
No 202
>PRK15075 citrate-proton symporter; Provisional
Probab=99.10 E-value=2e-09 Score=107.49 Aligned_cols=134 Identities=15% Similarity=0.025 Sum_probs=95.6
Q ss_pred hhhHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHH-HHH---HhhhHHHHH
Q 009099 124 NGALEYLA-KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF-LCA---TAQSVQTMI 198 (543)
Q Consensus 124 ~~~~~~i~-~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~---~~~~~~~l~ 198 (543)
....|.+. +.+|.+..+. ++....+.++..++.+++|+++||+|||++++.+.++..+... ... ..+++..+.
T Consensus 258 ~~~~p~~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15075 258 TVYTPTFGKTVLHLSAADS--LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML 335 (434)
T ss_pred HHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 34455544 4589988877 8888889999999999999999999999988776554433221 111 123444455
Q ss_pred HHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHH-HHHHHHHHHHHhhcccCCCCCch
Q 009099 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQL-FICVGILAALVAGLPLAGNPLWW 260 (543)
Q Consensus 199 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~~~~~~~~l~~~~~~w 260 (543)
+..++.|++.+...+....++.|.+|+++|+.++++... +..++..++|.+.+++.+. .|+
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~-~g~ 397 (434)
T PRK15075 336 AVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV-TGD 397 (434)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh-cCC
Confidence 556666777776666677889999999999999998544 4445566788888888765 454
No 203
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.09 E-value=1.7e-09 Score=121.99 Aligned_cols=145 Identities=23% Similarity=0.298 Sum_probs=123.6
Q ss_pred hHHHHHHHcCCCcc-hhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 009099 126 ALEYLAKDLGIAEN-TVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (543)
Q Consensus 126 ~~~~i~~~~~~s~~-~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 204 (543)
..+++.+++|.+.. .. +++.+.+.++..++++++|+++||+++|+++.++.++.+++.++..+..+.+.++++.++.
T Consensus 255 ~~~~~~~~~g~s~~~~~--g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQV--QYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLF 332 (1146)
T ss_pred hHHHHHHHhCCCcHHHH--HHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 44566677899887 77 9999999999999999999999999999999999999988888888888999999999999
Q ss_pred hhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 205 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
|++.+...+...+++.+.+|+++||+++++.+....+|.++++.+++.+.....++...|++.+.+.+
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 99999988889999999999999999999999999999888888877664322456666666555443
No 204
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.08 E-value=2.7e-09 Score=100.71 Aligned_cols=138 Identities=16% Similarity=0.133 Sum_probs=108.5
Q ss_pred hHHHHHH--HcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHH
Q 009099 126 ALEYLAK--DLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (543)
Q Consensus 126 ~~~~i~~--~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 203 (543)
...++.+ .+|.++++. ++..+.+..++.++.++.+++.||+|+|+++.++.++..++.++....++... ..+-++
T Consensus 163 ~~~yl~~~~~~g~s~~~a--~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l 239 (310)
T TIGR01272 163 LVNFLSDPHALGLPEDQA--AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLA 239 (310)
T ss_pred HHHHHHhcccCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHH
Confidence 4444543 368888888 99999999999999999999999999999998888888887766666554433 345668
Q ss_pred HhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHH
Q 009099 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAI 269 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~ 269 (543)
.|++.+..+|...+...+.++++ .+.+.++. ....+|..+.|.+.|.+.+. .|.+..|++..+
T Consensus 240 ~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~-~g~~~a~~v~~~ 302 (310)
T TIGR01272 240 LGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC-LGIQLAFALPVP 302 (310)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh-ccchHHHHHHHH
Confidence 99999999999999999988765 45666665 45668889999988888776 678888874443
No 205
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.07 E-value=4.4e-09 Score=98.22 Aligned_cols=160 Identities=14% Similarity=0.040 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 009099 359 NAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSG 436 (543)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (543)
..+....+.+.+++++++.+. +..+..+.+.+.++..|++.||+|.|++...+.++..+-++.+.+..... +.
T Consensus 31 ~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~-----~~ 105 (417)
T COG2223 31 TLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP-----ST 105 (417)
T ss_pred HHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC-----ch
Confidence 344444455557788888866 56667788999999999999999999999999999888888888764321 11
Q ss_pred hhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc---cccchhhhhHHH
Q 009099 437 TLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG---ISTVYLGFATVC 513 (543)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g---~~~~~~~~~~~~ 513 (543)
+..++..++.+. ..+...+...+++..+|++++|.++|+.. .+|+|..+...+...+....| |+....+.....
T Consensus 106 ~~ll~~gll~G~--~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l 182 (417)
T COG2223 106 WQLLVIGLLLGL--AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVAL 182 (417)
T ss_pred HHHHHHHHHHhc--ccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 233333333333 33344555568999999999999999999 999999999999988888888 888888888888
Q ss_pred HHHHHhhheeccc
Q 009099 514 LLAVLYIAVNVVE 526 (543)
Q Consensus 514 ~~~~~~~~~~~~~ 526 (543)
++..+..++..++
T Consensus 183 ~v~~v~~~~~~~d 195 (417)
T COG2223 183 AIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHhCC
Confidence 8877777776554
No 206
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.07 E-value=9.1e-10 Score=110.33 Aligned_cols=117 Identities=18% Similarity=0.217 Sum_probs=98.4
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhccccccch
Q 009099 137 AENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIGISSAIV 215 (543)
Q Consensus 137 s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~ 215 (543)
+.... +++.++..++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+..
T Consensus 255 ~~~~~--~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (437)
T TIGR00792 255 DPELF--SYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLV 332 (437)
T ss_pred ChHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444 788888899999999999999999999999999998888887777665 466777788889999999888888
Q ss_pred hhhhhccCC-------cccchhhhHHHHHHHHHHHHHHHHhhcccCC
Q 009099 216 PLYISEISP-------TEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (543)
Q Consensus 216 ~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 255 (543)
.++++|..+ ++++|.++++.+....+|..+++.+.+.+.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 333 WALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889888865 4556999999999999999999988887654
No 207
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.05 E-value=7.7e-09 Score=101.94 Aligned_cols=157 Identities=10% Similarity=0.047 Sum_probs=112.9
Q ss_pred hHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYS 435 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (543)
........|.+.++++.+.... ......++..++.+..|++.||+|||+.+..+..+.+++.+++...... .+
T Consensus 19 ~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~-----~~ 93 (410)
T TIGR00885 19 NDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI-----MN 93 (410)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh-----cc
Confidence 3455566778888888887654 5666788999999999999999999999999999988888776443110 12
Q ss_pred chhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh----------------
Q 009099 436 GTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK---------------- 499 (543)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~---------------- 499 (543)
.+..++..++.+.+.+.. .+....++.+..|++++++..++.+...++|..++|.+.+.+...
T Consensus 94 ~~~~l~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~ 172 (410)
T TIGR00885 94 YTLFLVGLFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPE 172 (410)
T ss_pred HHHHHHHHHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHH
Confidence 233344444444444432 233344677888989999999999999999999999998877532
Q ss_pred ----------hccccchhhhhHHHHHHHHhh
Q 009099 500 ----------FGISTVYLGFATVCLLAVLYI 520 (543)
Q Consensus 500 ----------~g~~~~~~~~~~~~~~~~~~~ 520 (543)
.+|+.+|.+.+++.++..++.
T Consensus 173 ~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 173 ELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888888777666554443
No 208
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.03 E-value=2.7e-09 Score=103.60 Aligned_cols=134 Identities=16% Similarity=0.047 Sum_probs=105.0
Q ss_pred hhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-cccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHH
Q 009099 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (543)
Q Consensus 125 ~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 203 (543)
...|.+.++.|.+..+. +.+.+.+.++..++.++.|++.||+ +||+.+..+.++.+++.+++.+.++.+... .-++
T Consensus 218 ~~lp~~~~~~g~~~~~~--g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 294 (355)
T TIGR00896 218 GWLPAILISHGASAATA--GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALV 294 (355)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHH
Confidence 35676667789988888 9999999999999999999999999 566677778888888777777665433332 4567
Q ss_pred HhhhccccccchhhhhhccCC-cccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchH
Q 009099 204 AGIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr 261 (543)
.|++.+..++.....+.+..+ +++++...++.+....+|..++|.+.+++.+...+|.
T Consensus 295 ~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 295 LGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 899999888887777765554 5667888999888888899999999998876544443
No 209
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.03 E-value=3.5e-09 Score=119.06 Aligned_cols=145 Identities=14% Similarity=0.067 Sum_probs=119.9
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh---------------
Q 009099 127 LEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA--------------- 191 (543)
Q Consensus 127 ~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--------------- 191 (543)
.+++.+.+|.+.... |++.+.+.++..+++++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 249 p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 249 PLLAKETLGGDENVA--TLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HHHHHHHcCCchHHH--HHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 344556689988888 999999999999999999999999988887777777776666555543
Q ss_pred -----hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHH
Q 009099 192 -----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (543)
Q Consensus 192 -----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~ 266 (543)
++.+.++++.++.|++.+...+...+++.+.+|++.||+++|+.+....+|..+++++.+.+.+...++...+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~ 406 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILF 406 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 677888889999999999999999999999999999999999999999999999999988876443567777766
Q ss_pred hHHHHHH
Q 009099 267 AAIPSIL 273 (543)
Q Consensus 267 ~~~~~~~ 273 (543)
.+++.++
T Consensus 407 ~~~~~~~ 413 (1140)
T PRK06814 407 IALANLI 413 (1140)
T ss_pred HHHHHHH
Confidence 6554443
No 210
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.03 E-value=3.6e-09 Score=105.87 Aligned_cols=177 Identities=14% Similarity=0.091 Sum_probs=119.4
Q ss_pred cchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH-HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHH
Q 009099 337 SRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA-ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGM 415 (543)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 415 (543)
++++...+...++.....+........-++.+..+.|-++... ......++..++.++.|+++|.+|||..++.+.++.
T Consensus 39 s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~ 118 (599)
T PF06609_consen 39 SPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLG 118 (599)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Confidence 3444444444444443333333333444566777777766543 556667788888999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHH
Q 009099 416 AASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLS 495 (543)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 495 (543)
.++.++.+.+ .+....+.+..+.+.+.+ ........++|..|.+.|+.+.++.....-....+++.+...
T Consensus 119 vvG~Iv~atA--------~~~~~~iag~~l~GvgaG--~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~ 188 (599)
T PF06609_consen 119 VVGSIVCATA--------QNMNTFIAGMVLYGVGAG--VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQL 188 (599)
T ss_pred HhHHHHhhcC--------CcHHHHHHHHHHHHHhhH--HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHH
Confidence 9999988764 233445555666555533 333444568999999999888877765554555566777666
Q ss_pred HHHhhccccchhhhhHHHHHHHHhhhee
Q 009099 496 VVNKFGISTVYLGFATVCLLAVLYIAVN 523 (543)
Q Consensus 496 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 523 (543)
+..+.+|++.|++.+++..++.+..+++
T Consensus 189 ~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 189 FAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred hccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 6666789999998888777666554443
No 211
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.01 E-value=6.9e-09 Score=97.47 Aligned_cols=134 Identities=19% Similarity=0.249 Sum_probs=99.2
Q ss_pred HHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhh----hhcccchhhhh-hHHHHHHHHHHHHhh
Q 009099 118 YHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGRTRTFQLD-AVPLAAGAFLCATAQ 192 (543)
Q Consensus 118 ~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~~~~~-~~~~~i~~~~~~~~~ 192 (543)
+.+..-....+.+.+++|++..-. +.+--+--+...+.+|+.|..+| ||||||.++.. .+...++.++.+++.
T Consensus 46 f~wA~elsy~tPyl~~lGvphk~~--S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aa 123 (498)
T KOG0637|consen 46 FGWALELSYLTPYLQSLGVPHKWS--SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAA 123 (498)
T ss_pred HHHHHHhccccHHHHHcCCCcccc--cccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHh
Confidence 333333446667778889887766 77777777777889999999999 58988877654 444556666777765
Q ss_pred hHHH-----------------HHHHHHHHhhhccccccchhhhhhccCCcccchh-hhHHHHHHHHHHHHHHHHhhccc
Q 009099 193 SVQT-----------------MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGA-LGSVNQLFICVGILAALVAGLPL 253 (543)
Q Consensus 193 ~~~~-----------------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~~~~~~~~l 253 (543)
++.. ++++.-+.=++.-....++-+++.|...++++.+ +++++.....+|..+|..++.+.
T Consensus 124 Dig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 124 DIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 5443 3344444445555778889999999998877777 99999999999999999888754
No 212
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.01 E-value=9e-07 Score=85.85 Aligned_cols=372 Identities=15% Similarity=-0.017 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHH
Q 009099 108 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL 187 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 187 (543)
.++...++...+.-+.....+.+..+..-+ +-...+...-.-.+...++++..|.+.||..|.++...+.+.--++..+
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~-sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~ 84 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFPG-SLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAA 84 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHH
Confidence 346666777666777777777776666321 1111133333344556678888999999999999887776654333222
Q ss_pred HH------Hh--h----hHHHHHHHH---HHHhhhcccc-ccchhhhhhccC------CcccchhhhHHHHHHHHHHHHH
Q 009099 188 CA------TA--Q----SVQTMIIGR---VLAGIGIGIS-SAIVPLYISEIS------PTEIRGALGSVNQLFICVGILA 245 (543)
Q Consensus 188 ~~------~~--~----~~~~l~~~r---~l~G~~~g~~-~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~ 245 (543)
++ +. + +-+....+. .+.|.-.-.. .....++=.||. +++.+.+.++...-.-.+.-++
T Consensus 85 s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckll 164 (432)
T PF06963_consen 85 SCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLL 164 (432)
T ss_pred HHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHH
Confidence 21 11 1 112222222 2222211111 111122223453 2344467777777777888999
Q ss_pred HHHhhcccCCCCCchHHHHHHhHHHHHHHHHH-hcc---c-CCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHh
Q 009099 246 ALVAGLPLAGNPLWWRTMFGLAAIPSILLALG-MGL---S-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNA 320 (543)
Q Consensus 246 ~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~---~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (543)
+|++.|.+... .+.+....+.++..++..+. .++ + ...|. +..+++.++........ .....+......+..
T Consensus 165 aPl~vG~l~t~-~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~-L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 241 (432)
T PF06963_consen 165 APLFVGLLMTF-ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPA-LAVKKRSSESESSSDEE-SSSESSSDPSILKRL 241 (432)
T ss_pred HHHHHHHHhhc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-hcCCCCCcccccccccc-ccccccchhhHHHHH
Confidence 99999998765 67777777777777664432 111 1 22222 22222211111100000 000000000000000
Q ss_pred ccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHh
Q 009099 321 GQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSL 398 (543)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l 398 (543)
.+.-.+....|+..++.+.+...+-...+++- ..+ +......+....|+++... .-....+.++.+.++.+++
T Consensus 242 ~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLs----f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l 316 (432)
T PF06963_consen 242 WNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLS----FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWL 316 (432)
T ss_pred HHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-Hhc----CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001123455666666655543333333322 222 2233334445568887744 4456677889999999999
Q ss_pred hhccCChhHHHHHHHHHHHHHHHHHHHHhhcccc--cccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHH
Q 009099 399 MDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLA--PYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVA 476 (543)
Q Consensus 399 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 476 (543)
.+|+|..+.-.++......++.+..........+ ..+....+.++.+.-.|.- ++-....-+++|..|+++||...|
T Consensus 317 ~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW-~fDL~~~qi~Qe~V~~~~Rg~v~g 395 (432)
T PF06963_consen 317 MKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLW-SFDLAVTQIMQENVPESERGAVSG 395 (432)
T ss_pred HHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHH-hhhHHHHHhhcccCCHHHhhHHHH
Confidence 9999998888888777666655555443332211 1111122222222222211 122223337889999999999999
Q ss_pred HHHHHHHHHHHHH
Q 009099 477 LSLGMHWISNFVI 489 (543)
Q Consensus 477 ~~~~~~~~g~~~~ 489 (543)
+-+...++...+.
T Consensus 396 vq~sl~~lf~ll~ 408 (432)
T PF06963_consen 396 VQNSLQSLFELLS 408 (432)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887554
No 213
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.01 E-value=5.4e-09 Score=103.34 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=105.0
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHH-HHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH---HHh-hhHHHHHHHH
Q 009099 127 LEYLAKDLGIAENTVLQGWIVSSLL-AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---ATA-QSVQTMIIGR 201 (543)
Q Consensus 127 ~~~i~~~~~~s~~~~~~g~~~s~~~-l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~l~~~r 201 (543)
.+.+.+++|.+.++. +++.+... ++..++.+++|++.||+|+|+.+..+.++..+..+.. ++. ++.+.++++-
T Consensus 233 ~~~l~~~~G~~~~~~--g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 233 TTFLIRGAGFSAGEV--GIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 456777899998888 88886654 5688999999999999999998877777666554433 344 4556555554
Q ss_pred ----HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 202 ----VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 202 ----~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
++.|++.+...+....++.+.+|.+++ ++.....++|..+++.++|.+.+. .||+..|.+.++++++..++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~-~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEA-YGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHH
Confidence 345566666677777777777776544 455555567776566678888776 89999999988888776555
Q ss_pred hc
Q 009099 278 MG 279 (543)
Q Consensus 278 ~~ 279 (543)
.+
T Consensus 386 ~~ 387 (402)
T PRK11902 386 LW 387 (402)
T ss_pred HH
Confidence 43
No 214
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.00 E-value=2.1e-09 Score=97.76 Aligned_cols=130 Identities=18% Similarity=0.163 Sum_probs=99.5
Q ss_pred HHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhh
Q 009099 153 GATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALG 232 (543)
Q Consensus 153 ~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~ 232 (543)
.-.-|.++.+++.||+|||+.+..+.+++++..++...+.+-..+.+.-|..-++..+.+.+++.|..|.+|..-|+...
T Consensus 393 aefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgv 472 (528)
T KOG0253|consen 393 AEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGV 472 (528)
T ss_pred hhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcch
Confidence 34467789999999999999999999999999988877755444444444444455666778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCCCh
Q 009099 233 SVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESP 285 (543)
Q Consensus 233 ~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 285 (543)
|.-....-+|.++.|+++ ... + ..-..+..+.+...++..+...++|-++
T Consensus 473 GtcSsmaRIggI~~p~iA-~~~-e-~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 473 GTCSSMARIGGIFSPVIA-MRA-E-LSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhHHhhhhhhhhHHH-HHh-c-cceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999999999999999998 222 2 2334455566677777777777776443
No 215
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.99 E-value=8.4e-10 Score=105.40 Aligned_cols=155 Identities=17% Similarity=0.180 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHHHcCCCch--hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 009099 358 INAVVYYSTSVFRSVGIESD--VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYS 435 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (543)
...+.+++--.+++.+.... +......-.+.++.-++.+++.+|+|+-+++..++....+=++.+... .+
T Consensus 387 ~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--------~n 458 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--------QN 458 (618)
T ss_pred HHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--------cC
Confidence 33444444444566554333 224455567788888999999999999999988887777766666654 13
Q ss_pred chhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHH-HHHHHHHHHhhHHHHHhhccccchhhhhHHHH
Q 009099 436 GTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMH-WISNFVIGLYFLSVVNKFGISTVYLGFATVCL 514 (543)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 514 (543)
+|..+..-++-+......+..+. +|+....||+.+.++.++..... .+|-.+|+++.|.+.+.+|.+..|.++++.++
T Consensus 459 ~W~vLPieilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl 537 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACL 537 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHH
Confidence 34444444555555554444344 48999999999999999987764 57888999999999999999999998888877
Q ss_pred HHHHhhh
Q 009099 515 LAVLYIA 521 (543)
Q Consensus 515 ~~~~~~~ 521 (543)
+..++..
T Consensus 538 ~~l~~~~ 544 (618)
T KOG3762|consen 538 VTLALFI 544 (618)
T ss_pred HHHHHHH
Confidence 7665443
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.4e-08 Score=99.00 Aligned_cols=161 Identities=18% Similarity=0.125 Sum_probs=116.3
Q ss_pred HhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh---hhHH---
Q 009099 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---QSVQ--- 195 (543)
Q Consensus 122 ~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---~~~~--- 195 (543)
........+-++-|++..+. .++.........+..+++..+.||+|||+.++.++.+..+..+++... .+..
T Consensus 288 ai~~Yst~i~~~aG~~~~~a--~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (485)
T KOG0569|consen 288 AIFFYSTSIFKTAGFTPEEA--QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSW 365 (485)
T ss_pred eeHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33445567788889998888 888888899999999999999999999999999999999988777654 2221
Q ss_pred ---HHHHHHHHHhhhccc-cccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHH
Q 009099 196 ---TMIIGRVLAGIGIGI-SSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (543)
Q Consensus 196 ---~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 271 (543)
..+++.++..++.+. .-|...-+.+|.+|++.|+.++++.....-+...+-...-..+.+. .|= +.|.+..+++
T Consensus 366 ~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~-~g~-~~filF~i~~ 443 (485)
T KOG0569|consen 366 LSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV-IGP-YVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc-hhhHHHHHHH
Confidence 123333333333322 3567788899999999999999998888777766655555444433 332 6777777777
Q ss_pred HHHHH-HhcccCCChh
Q 009099 272 ILLAL-GMGLSPESPR 286 (543)
Q Consensus 272 ~~~~~-~~~~~~e~~~ 286 (543)
++..+ .+..+||++.
T Consensus 444 ~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 444 AIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHhCcccCC
Confidence 66555 4555799864
No 217
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.97 E-value=1.3e-08 Score=98.85 Aligned_cols=161 Identities=16% Similarity=0.083 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHcCCCchhHHHHH-HHHHHHHHHHHHHHhhhcc-----CChhHH-HHHHHHHHHHHHHHHHHHhhcccc
Q 009099 360 AVVYYSTSVFRSVGIESDVAASAL-VGAANVFGTAVASSLMDRQ-----GRKNLL-TFSFTGMAASMLLLSLSFTWKVLA 432 (543)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~-----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 432 (543)
....-.|.+.++.|.+........ ..+...+ .++.|+++||+ ||||.+ +.+.++.++....+.+..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~------ 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV------ 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC------
Confidence 344456777788888887663222 2333333 88999999997 788864 455555555544444321
Q ss_pred cccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc--------ccc
Q 009099 433 PYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG--------IST 504 (543)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g--------~~~ 504 (543)
+....+.+....+..........+...+++.|.+|+++|+.+.++.....++|.++++.+.+.+.+..| |+.
T Consensus 79 ~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 79 PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 111122222222222222333345556688999999999999999999999999999999999988888 999
Q ss_pred chhhhhHHHHHHHHhhheecccC
Q 009099 505 VYLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
.|++.+++.++..++.++..+|+
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC
Confidence 99888887776655544444554
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.97 E-value=1.6e-07 Score=96.53 Aligned_cols=154 Identities=19% Similarity=0.198 Sum_probs=123.6
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhh-hcccchhhhhhHHHHHHHHHHHHhhh--------H
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQS--------V 194 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~--------~ 194 (543)
..+.-++.+.+|.+.+.. ..+...+....-+..+++|+++|+ +|+++.++++.++..++.++.+++.. .
T Consensus 8 aiLvlYl~~~lg~~~~~A--~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~ 85 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTS--TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHD 85 (654)
T ss_pred HHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHH
Confidence 345667777889988877 788888888888999999999996 69999999999999999888776421 2
Q ss_pred HHHHHHHHHHhhhccccccchhhhhhccCCccc---chhhhHHHHHHHHHHHHHHHHhhcccCCC------CCchHHHHH
Q 009099 195 QTMIIGRVLAGIGIGISSAIVPLYISEISPTEI---RGALGSVNQLFICVGILAALVAGLPLAGN------PLWWRTMFG 265 (543)
Q Consensus 195 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~l~~~------~~~wr~~f~ 265 (543)
...+++-.+..+|.|+.-+...+...|.+++++ |...+.++..+.++|.++++.+..++.+. ..+|...|.
T Consensus 86 ~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~ 165 (654)
T TIGR00926 86 LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFG 165 (654)
T ss_pred HHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Confidence 336677788899999999999999999997643 56788888999999999998888777522 247999999
Q ss_pred HhHHHHHHHHHHhc
Q 009099 266 LAAIPSILLALGMG 279 (543)
Q Consensus 266 ~~~~~~~~~~~~~~ 279 (543)
+.++..++..+...
T Consensus 166 i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 166 VPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888877665543
No 219
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.97 E-value=3.4e-08 Score=97.06 Aligned_cols=141 Identities=14% Similarity=0.036 Sum_probs=111.4
Q ss_pred HHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhh
Q 009099 128 EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIG 207 (543)
Q Consensus 128 ~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 207 (543)
+++++.+|.++.+. |++.+.+.++..+++++.+++.||+++|+++..+. +.++..++.++.++++.+++..++.|++
T Consensus 230 ~~~~~~lg~s~~~~--G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 306 (393)
T PRK11195 230 AWAPVALGITLNQP--AYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGAL 306 (393)
T ss_pred HHHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45667789998888 99999999999999999999999999998888775 4455555666778888788888899999
Q ss_pred ccccccchhhhhhccCCccc-chhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHH
Q 009099 208 IGISSAIVPLYISEISPTEI-RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (543)
Q Consensus 208 ~g~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 271 (543)
.+...+...+.+.+..|++. +|++.++.+....+|..++..+.+.+......++..|...+.+.
T Consensus 307 ~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (393)
T PRK11195 307 GGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLV 371 (393)
T ss_pred hhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99888888888888766554 69999999999999999998888866432233444444454443
No 220
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.95 E-value=8.2e-09 Score=106.83 Aligned_cols=177 Identities=12% Similarity=-0.006 Sum_probs=120.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHH
Q 009099 345 VGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLL 422 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 422 (543)
+...+..+...........-++.+.++++++.... +.....++..++.++.+++.||.+||+.+.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 33333444443334455555667777777776644 5666778889999999999999999999999999999999888
Q ss_pred HHHHhhccc-----------------------c-----------------c--c-cchhHHHHHHHHHHHhhcCcccccc
Q 009099 423 SLSFTWKVL-----------------------A-----------------P--Y-SGTLAVLGTVLYVLSFSLGAGPVPA 459 (543)
Q Consensus 423 ~~~~~~~~~-----------------------~-----------------~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (543)
++....... . . . .....+++-++.+.+. ....+...
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~-~~~~~~~~ 194 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA-TPIFPLGI 194 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC-CcchhcCc
Confidence 765321000 0 0 0 0112223333333333 23456677
Q ss_pred cccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh----------------------ccccchhhhhHHHHHHH
Q 009099 460 LLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF----------------------GISTVYLGFATVCLLAV 517 (543)
Q Consensus 460 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~----------------------g~~~~~~~~~~~~~~~~ 517 (543)
+++.|.+|++.|+.+.|+.+....+|..+|+.+.+.+.+.+ +|+..|++.+++.++.+
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999887643 14445666666666655
Q ss_pred Hhhhe
Q 009099 518 LYIAV 522 (543)
Q Consensus 518 ~~~~~ 522 (543)
+..++
T Consensus 275 v~l~~ 279 (633)
T TIGR00805 275 IPFFF 279 (633)
T ss_pred HHHHh
Confidence 44433
No 221
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=2.3e-08 Score=97.26 Aligned_cols=156 Identities=19% Similarity=0.265 Sum_probs=120.4
Q ss_pred HHhhhhHHHHHHHcC-CCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh-hhHHHHH
Q 009099 121 GVVNGALEYLAKDLG-IAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-QSVQTMI 198 (543)
Q Consensus 121 ~~~~~~~~~i~~~~~-~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~l~ 198 (543)
..+....+...++.| .+.+.. +.+.++..+.-.+.-.+.+++..|+|.|+++.++.+.+++=..+.++. ++.+...
T Consensus 224 ~~~~~f~~~yl~~~gg~~~~~~--g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~ 301 (400)
T PF03825_consen 224 AAYYTFFSIYLQELGGYSGSTI--GILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIV 301 (400)
T ss_pred HHHHHHHHHHHHHcccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 333334555566776 566666 777777778888888999999999999999999999999988888887 5554433
Q ss_pred H----HHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHH-HHHHHHHHHHhhcccCCCC-----CchHHHHHHhH
Q 009099 199 I----GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLPLAGNP-----LWWRTMFGLAA 268 (543)
Q Consensus 199 ~----~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~~~~~~~~l~~~~-----~~wr~~f~~~~ 268 (543)
+ ...++|+..+..+.+...++.+..|++.|+++.+++.+. .++|..+|.+++|++.+.. ..|...+.+.+
T Consensus 302 ~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a 381 (400)
T PF03825_consen 302 ALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFA 381 (400)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHH
Confidence 3 345699999999999999999999999999999998764 6899999999999998651 23555666666
Q ss_pred HHHHHHHHHh
Q 009099 269 IPSILLALGM 278 (543)
Q Consensus 269 ~~~~~~~~~~ 278 (543)
+..++..+++
T Consensus 382 ~~~~~~~~~f 391 (400)
T PF03825_consen 382 VMALVILVLF 391 (400)
T ss_pred HHHHHHHHHH
Confidence 6555544433
No 222
>PRK10133 L-fucose transporter; Provisional
Probab=98.94 E-value=5.6e-08 Score=96.78 Aligned_cols=136 Identities=10% Similarity=-0.029 Sum_probs=97.5
Q ss_pred hhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 009099 356 AGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP 433 (543)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (543)
........+.|.+.++++.+.... ......++..++.++.|++.||+|||+.+..+..+.+++.+++..... .
T Consensus 40 ~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~-----a 114 (438)
T PRK10133 40 VANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-----I 114 (438)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh-----c
Confidence 335667777888888888887655 556678899999999999999999999999999999988877532211 0
Q ss_pred ccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHH
Q 009099 434 YSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
.+....++..++.+.+.+.. .+....++.|..|++.++..+++.+....+|..+++.+.+.+.
T Consensus 115 ~~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 115 MNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233444445555554433 3333446667777776667899999999999999998876544
No 223
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.94 E-value=1.9e-09 Score=99.26 Aligned_cols=144 Identities=18% Similarity=0.134 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccc
Q 009099 378 VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPV 457 (543)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (543)
+.++....+..++..++.|.+.||+|+|..+++|+.++....+++++.. +.+..+++-.+=+.+... ....
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--------sy~~l~vAR~LQgvgsA~-~~ts 179 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--------SYPMLFVARSLQGVGSAF-ADTS 179 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--------hhHHHHHHHHHhhhhHHH-HHhh
Confidence 4467777889999999999999999999999999999999998888752 233445555555555443 3344
Q ss_pred cccccccccChhh-hhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccCCCC
Q 009099 458 PALLLPEIFASRI-RAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGR 530 (543)
Q Consensus 458 ~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (543)
..+++++.+|.+. |++++|+...+..+|-.+||++.|.+++..|++.+|+++++++++...+.++.++.++.+
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 5558889998765 699999999999999999999999999999999999999999999888776666544433
No 224
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.92 E-value=1.6e-09 Score=103.34 Aligned_cols=137 Identities=14% Similarity=0.108 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhcc
Q 009099 143 QGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEI 222 (543)
Q Consensus 143 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 222 (543)
.|.+.++..+.-++...+..++.+|+|.|+.++++..++++=-++++++++.+.+.+.+.+.|+-.+........++++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhhHHH-HHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcc
Q 009099 223 SPTEIRGALGSVN-QLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL 280 (543)
Q Consensus 223 ~~~~~r~~~~~~~-~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 280 (543)
+|++..++...+. +...++|..+.+.++|.+.|+ .|.+.+|++.+.+.+...+...+
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~-~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR-IGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh-cCcHHHHHHHHHHHHHHHHHhee
Confidence 9998777777664 677889999999999999877 89999999988887765554443
No 225
>PTZ00207 hypothetical protein; Provisional
Probab=98.92 E-value=7.5e-08 Score=97.16 Aligned_cols=165 Identities=16% Similarity=0.122 Sum_probs=104.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCchhHHHHH-HHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 356 AGINAVVYYSTSVFRSVGIESDVAASAL-VGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
+..+.+..+.+.+.++++++........ .+.......++.|++.||+|+|+++.++.++..++.+++++...... ..
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i--~~ 118 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI--EG 118 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc--cC
Confidence 3345666778888888898877652211 22223345567899999999999999999999999988877522100 01
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHH
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCL 514 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 514 (543)
+.+...+..++.+.+.+. ..+.....+.+.+| ++||.+.|+......+|+++.+.+...+.. .++...|++.+++.+
T Consensus 119 s~~~l~l~r~l~G~G~~~-~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~ 195 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCML-FDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFAL 195 (591)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 222233333333333322 22223335667787 669999999999999999875555555443 345667777777766
Q ss_pred HHHHhhheecc
Q 009099 515 LAVLYIAVNVV 525 (543)
Q Consensus 515 ~~~~~~~~~~~ 525 (543)
+..++.+.+.+
T Consensus 196 vv~ll~~~~vr 206 (591)
T PTZ00207 196 VVGILAIVFMR 206 (591)
T ss_pred HHHHHHHhhee
Confidence 66555555443
No 226
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.91 E-value=8.1e-08 Score=92.54 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHHHcCCCchh-H--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDV-A--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
=...++-.+++.+++|++... . .......+..+..+.+|+++||+|.|+++..+.+...+..+++.+..
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~-------- 113 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT-------- 113 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--------
Confidence 455666677777889988877 3 66777788999999999999999999999999988888888887751
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccc
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTV 505 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~ 505 (543)
+.....+.-++++.+-+... ....++...+|+++|+++.|+.+....+|.++++++.+. ...+||+..
T Consensus 114 Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y 181 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISY 181 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhH
Confidence 22334444555555555444 555688999999999999999999999999999999999 556776654
No 227
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.91 E-value=9.4e-06 Score=79.83 Aligned_cols=266 Identities=9% Similarity=0.008 Sum_probs=153.0
Q ss_pred hHHHHHHHcCCC-----cchhhHHHHHHHHHHHHHHH-HHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh----h---
Q 009099 126 ALEYLAKDLGIA-----ENTVLQGWIVSSLLAGATVG-SFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA----Q--- 192 (543)
Q Consensus 126 ~~~~i~~~~~~s-----~~~~~~g~~~s~~~l~~~i~-~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----~--- 192 (543)
++-.+++.+.++ .+.+ .++-+...+...+. .++.+++++|++|++++-+....+....+++++. +
T Consensus 25 iLR~lKD~lvv~~~~~gae~i--~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~ 102 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEII--PFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLL 102 (472)
T ss_pred HHHhhhhheeecccCCchhhH--HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhc
Confidence 566777777663 2345 88888887776666 8999999999999999988888877777666654 1
Q ss_pred ------------------------hHHHHHHHHHHHhhhcccccc-chhhhhhccCCcccchhhhHHHHHHHHHHHHHHH
Q 009099 193 ------------------------SVQTMIIGRVLAGIGIGISSA-IVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (543)
Q Consensus 193 ------------------------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 247 (543)
+.|...+..+...+....... .-..++.|.++.+|-.|..++++.+.++|.++++
T Consensus 103 ~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg 182 (472)
T TIGR00769 103 HPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSG 182 (472)
T ss_pred CCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444444554444444 5667899999999999999999999999999999
Q ss_pred HhhcccC-------CCCCchH----HHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHH
Q 009099 248 VAGLPLA-------GNPLWWR----TMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLD 316 (543)
Q Consensus 248 ~~~~~l~-------~~~~~wr----~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (543)
.+..++. .....|. +.+.+.++.+++...+..++.+.. ..+.+.... + .
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~---~~~~~~~~~---------------~--~ 242 (472)
T TIGR00769 183 RTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV---LTDPRSYNP---------------A--L 242 (472)
T ss_pred HHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCccccch---------------h--h
Confidence 8877765 2223453 233333333333333332221110 000000000 0 0
Q ss_pred HHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH------HHHHHHHHHHH
Q 009099 317 LTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVA------ASALVGAANVF 390 (543)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 390 (543)
.+++++.+..-.++++.++++|..+.+.+...++.......+ ..|-... ++...++... .....++..++
T Consensus 243 ~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve---~~~k~~v-~~~~p~~~~~~~f~g~~~~~~gi~tl~ 318 (472)
T TIGR00769 243 KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVE---VTWKSKL-KAQYPSPNEYSAFMGDFSTWTGVVSVT 318 (472)
T ss_pred ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH---HHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000001111123456677888877766655555444322211 1122222 2222233211 23344566666
Q ss_pred HHHHHHHhhhccCChhHHHHHHHHHHH
Q 009099 391 GTAVASSLMDRQGRKNLLTFSFTGMAA 417 (543)
Q Consensus 391 ~~~~~g~l~d~~g~~~~~~~~~~~~~~ 417 (543)
..++.+++.+|+|-+....+.-++..+
T Consensus 319 ~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 319 MMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 677779999999987766665554444
No 228
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.89 E-value=9.5e-08 Score=94.32 Aligned_cols=179 Identities=15% Similarity=0.069 Sum_probs=112.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhh----ccCChhHHHHH-HHHHHHHHH
Q 009099 348 ALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMD----RQGRKNLLTFS-FTGMAASML 420 (543)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~-~~~~~~~~~ 420 (543)
......++. +.....+.+.+++.+|.+.... ......+.+++..++.|+++| |+|||+.++.. ....+++++
T Consensus 11 ~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ 89 (477)
T TIGR01301 11 SVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVI 89 (477)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 333333443 4555556666778888877644 556667888999999999999 59999988765 444445555
Q ss_pred HHHHHHhhcc-----ccccc-c---hhHHHHHHHHHHHhhcCcccccccccccccChhhh--hHHHHHHHHHHHHHHHHH
Q 009099 421 LLSLSFTWKV-----LAPYS-G---TLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIR--AKAVALSLGMHWISNFVI 489 (543)
Q Consensus 421 ~~~~~~~~~~-----~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~g~~~~~~~~g~~~~ 489 (543)
++.+...... ..... . ...++...+.-........| ..+++.|..|+++| +.+.++.+...++|+.++
T Consensus 90 ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p-~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg 168 (477)
T TIGR01301 90 LIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGP-CRAFLADLTGGDARRTRIANAYFSFFMAIGNVLG 168 (477)
T ss_pred HHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5544211100 00000 0 11122222222222222233 45589999998755 689999999999999999
Q ss_pred HHhhHHH--HHhh-------------ccccchhhhhHHHHHHHHhhheecccCC
Q 009099 490 GLYFLSV--VNKF-------------GISTVYLGFATVCLLAVLYIAVNVVETK 528 (543)
Q Consensus 490 ~~~~g~~--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (543)
+.+.+.. .+.. +++..|.+.+++.+++.++..+..+|..
T Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 169 YAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 9888764 2222 3456788888888888888888877754
No 229
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.89 E-value=7.7e-09 Score=94.73 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccc
Q 009099 380 ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPA 459 (543)
Q Consensus 380 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (543)
....+.+...+.++..|.++||+|||.++..|.+..++..++.+.. ... ..+...=+.++..-+...+..
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S---------~~F-~afv~aR~l~Gi~kgnl~v~r 142 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS---------RNF-AAFVLARFLGGIFKGNLSVIR 142 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH---------HHH-HHHHHHHHhhhhccCchHHHH
Confidence 5566788999999999999999999999999999888877777664 122 222222334444455666777
Q ss_pred cccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 460 LLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 460 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
++++|++++++|+.+++.+++...+|.++||.+.|++..
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 899999999999999999999999999999999999887
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.88 E-value=3e-08 Score=94.40 Aligned_cols=158 Identities=28% Similarity=0.448 Sum_probs=126.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHcCCCc--chhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh
Q 009099 114 ILFGYHLGVVNGALEYLAKDLGIAE--NTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA 191 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~~~~s~--~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 191 (543)
+....+........+.+..+++.+. ... ++..+.+.++..+++++.|.++||+|||+.+..+.....++.+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTLSLSSGRLLY--GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA 89 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHcCCCchhHHH--HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence 3333556666678888888887665 356 999999999999999999999999999988888887766667777777
Q ss_pred hh--HHHHHHHHHHHhhhccccccchhhhhhccCCc-ccchhhhHHHHH-HHHHHHHHHHHhhcccCCC-CCchHHHHHH
Q 009099 192 QS--VQTMIIGRVLAGIGIGISSAIVPLYISEISPT-EIRGALGSVNQL-FICVGILAALVAGLPLAGN-PLWWRTMFGL 266 (543)
Q Consensus 192 ~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~~~~~~~~l~~~-~~~wr~~f~~ 266 (543)
.+ .+.+++.|+++|++.+...+...+++.|++++ ++|+...+.... ...+|..+++.+++.+... ..+||+.|.+
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 76 99999999999999999999999999999998 678888888888 5778888888776665432 3579997766
Q ss_pred hHHHHHH
Q 009099 267 AAIPSIL 273 (543)
Q Consensus 267 ~~~~~~~ 273 (543)
.......
T Consensus 170 ~~~~~~~ 176 (338)
T COG0477 170 AALLGLL 176 (338)
T ss_pred HHHHHHH
Confidence 6655543
No 231
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.85 E-value=5.8e-08 Score=96.80 Aligned_cols=138 Identities=25% Similarity=0.253 Sum_probs=112.8
Q ss_pred HHHHHHHHHhhhhHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh
Q 009099 114 ILFGYHLGVVNGALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ 192 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 192 (543)
+.............+++.++ +|.+ +.. +++..++.++..++.+++++++||+|+|+.+..+.++.+++.++..+.+
T Consensus 235 ~~~~~~~~~~~~~~~y~~~~vl~~~-~~~--~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 235 FLQWLAFALMNTFLPYYFTYVLGNE-GLI--SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHhhhhhhhhHHHHHHHHHhcCc-hhh--HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence 33334444445566666665 4444 555 8888999999999999999999999999999999999999999988886
Q ss_pred --hHHHHHHHHHHHhhhccccccchhhhhhccCCcc-------cchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 193 --SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTE-------IRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 193 --~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
|.+.+++.-++.|++.+...+...++++|..+.+ +.|..++......-+|..+++.+.+.+.
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988742 2388888888888888888887766553
No 232
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.84 E-value=8.7e-07 Score=81.26 Aligned_cols=139 Identities=16% Similarity=0.129 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhh-----hhcccchhh-hhhHHHHHH
Q 009099 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD-----KFGRTRTFQ-LDAVPLAAG 184 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~d-----r~Grr~~~~-~~~~~~~i~ 184 (543)
+...+.+...+... .+|.+.+.-|+|.++. +...-+ +.-+ .--++|.++.| |+||||.-+ -+..+.+..
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~--a~fS~a-y~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~ 112 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ--AIFSFA-YWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLF 112 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcCCCcchhhh--hhhhhh-hhHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHH
Confidence 34456666677766 8999998888888776 433322 2222 23467999999 999988543 355555554
Q ss_pred HHHHHHh-----------hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhccc
Q 009099 185 AFLCATA-----------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (543)
Q Consensus 185 ~~~~~~~-----------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 253 (543)
+.+.+.. ++...+....++.-+.++.--.+.-.+.-....+++.|.+......+...|..++..+.-.+
T Consensus 113 mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 113 MLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred HHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEe
Confidence 4444432 34444545556666777766677777888888899999999998888888888876665444
Q ss_pred C
Q 009099 254 A 254 (543)
Q Consensus 254 ~ 254 (543)
.
T Consensus 193 ~ 193 (510)
T KOG3574|consen 193 E 193 (510)
T ss_pred c
Confidence 3
No 233
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.82 E-value=5.8e-08 Score=84.40 Aligned_cols=357 Identities=18% Similarity=0.151 Sum_probs=185.0
Q ss_pred HhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHH
Q 009099 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGR 201 (543)
Q Consensus 122 ~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r 201 (543)
..+|.+-++-++++....++ |.+.-+-+....++..+.|.++|+-|||+.-+.-++...+++ +.-.++.|-.++++|
T Consensus 55 LQgPYvYyLYstYgFgkG~I--gqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR 131 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDI--GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGR 131 (454)
T ss_pred hcCceeeeeehhcCccCCcc--ceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehh
Confidence 33556667778888888888 888888888888889999999999999997655444444332 233468899999999
Q ss_pred HHHhhhccccccchhhh-hhccCCcccchhh-------hHHHH-HHHHHHHHHHHHhhcccCCC-CCchHHHHHHhHHHH
Q 009099 202 VLAGIGIGISSAIVPLY-ISEISPTEIRGAL-------GSVNQ-LFICVGILAALVAGLPLAGN-PLWWRTMFGLAAIPS 271 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~-i~~~~~~~~r~~~-------~~~~~-~~~~~G~~~~~~~~~~l~~~-~~~wr~~f~~~~~~~ 271 (543)
.+.|+..+..+.+--++ +.|.-.+ |+.- ++-.. .+..+-.+++.+.+..+.+. ..|--.+|-..+.+.
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHnek--r~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfL 209 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHNEK--RGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFL 209 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhc--cCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHH
Confidence 99999999888876665 4555422 3211 11111 12222233444444443321 133334444333322
Q ss_pred HHH-HHHhcccCCChhHHHhcCChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHH
Q 009099 272 ILL-ALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALF 350 (543)
Q Consensus 272 ~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (543)
.+. ++.+- .|-..-+++.+.++.+...... ...+..+++ ..+++ .+.
T Consensus 210 aigmAvil~------~W~ENygdps~~kdlltqf~ga-----------------------a~aiaSD~k--i~LLG-~iq 257 (454)
T KOG4332|consen 210 AIGMAVILS------SWSENYGDPSENKDLLTQFKGA-----------------------ARAIASDEK--IALLG-AIQ 257 (454)
T ss_pred HHHHHHHHh------hhhhccCChhhhHHHHHHhhHh-----------------------HHHHhcchH--HHHHH-HHH
Confidence 222 22221 1222223333333322221110 011111211 11222 222
Q ss_pred HHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCCh--hHHHHHHHHHHHHHHHHHHHHhh
Q 009099 351 LFQQLAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRK--NLLTFSFTGMAASMLLLSLSFTW 428 (543)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ 428 (543)
.......+..+..|.|.+-.+-.--+.+..+..+.+..++|+-+..++..|-..| ..+.+.+.+.++.+.+.......
T Consensus 258 sLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~v 337 (454)
T KOG4332|consen 258 SLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSV 337 (454)
T ss_pred HHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 2333333444444555432111112334556666677788887777777664433 44555555554444444333322
Q ss_pred cccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH--hhccccch
Q 009099 429 KVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN--KFGISTVY 506 (543)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~--~~g~~~~~ 506 (543)
.+ ...+...-+++.+++-.+.+..+ |...-+-.+..|.+.|++.+-.+..--++...++-+.. -.+ ..+.+..|
T Consensus 338 sP-~kes~~~s~i~F~~~E~cvGlfw-PSimkmRsqyIPEearstimNfFRvPLnifvClvLynl--h~~~~p~~tr~mf 413 (454)
T KOG4332|consen 338 SP-SKESPSESLIGFCLFEACVGLFW-PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL--HVDAFPTTTRNMF 413 (454)
T ss_pred CC-CcCCchHHHHHHHHHHHHHhhcc-hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec--ccccCccccchhh
Confidence 21 22333444566666666665544 44444677888999888766655544443333321110 011 23445677
Q ss_pred hhhhHHHHHHHHh
Q 009099 507 LGFATVCLLAVLY 519 (543)
Q Consensus 507 ~~~~~~~~~~~~~ 519 (543)
.++.+...++.+.
T Consensus 414 ~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 414 GICSAFLFVASIL 426 (454)
T ss_pred hhhHHHHHHHHHH
Confidence 7777776666543
No 234
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.81 E-value=1.4e-07 Score=82.89 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=101.3
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH-HHHHHhhhHHHHHHHHHHHh
Q 009099 127 LEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA-FLCATAQSVQTMIIGRVLAG 205 (543)
Q Consensus 127 ~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~r~l~G 205 (543)
....++.||+|.... +.+.+....-.++.+++.|.++|++|++...+.+..+..+.. ....| +++.=+++..++|
T Consensus 288 ~~fF~~rfGlS~~~a--~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lG 363 (459)
T KOG4686|consen 288 PMFFQKRFGLSAVSA--GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLG 363 (459)
T ss_pred HHHHHHhhCCChhhc--cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHh
Confidence 346788999999888 899998888889999999999999999988877666555443 22222 3334446677788
Q ss_pred hhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009099 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (543)
Q Consensus 206 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 258 (543)
+..+.........++...|+++.|++.|..+...++|..+.|++++.+.+...
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 88766555556677788899999999999999999999999999999987633
No 235
>PRK09848 glucuronide transporter; Provisional
Probab=98.78 E-value=5.8e-08 Score=97.45 Aligned_cols=127 Identities=14% Similarity=0.107 Sum_probs=98.6
Q ss_pred hHHHH-HHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh--hHHHHHHHHH
Q 009099 126 ALEYL-AKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGRV 202 (543)
Q Consensus 126 ~~~~i-~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~ 202 (543)
..|++ ++.+|.+.... ++......++..++.++++++.||+|+|+++.++.++..++.++..+.+ +++.+++..+
T Consensus 250 ~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 327 (448)
T PRK09848 250 SSLFYVRYVLNDTGLFT--VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALA 327 (448)
T ss_pred hheeeEeeecCChHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 44443 34466554333 4444445677888999999999999999999999999888887777653 6777777888
Q ss_pred HHhhhccccccchhhhhhccCCcc-------cchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 203 LAGIGIGISSAIVPLYISEISPTE-------IRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 203 l~G~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
+.|+|.+...+...++..|..+.+ ++|..+++.+....+|..+++.+.+.+.
T Consensus 328 l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 328 IASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888754 3488899999999999988888776653
No 236
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.76 E-value=5.2e-07 Score=85.81 Aligned_cols=133 Identities=16% Similarity=0.033 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccC
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 223 (543)
+.+.-+-.+...+.-+.+.++.+|+.-+.=.....+++.++.++.+++++.+.=+++-++.+++.|........+. ..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-HFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH-Hhc
Confidence 3455555666677777888889988755545666678888899999999999988899999999888777777664 455
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 224 PTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 224 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
++ ...+-+..+.+.++++|+..-..+......-|..+++...+.++..+..+++
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 53 3567777788878888877655554322445777777776665555544443
No 237
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.73 E-value=1e-07 Score=91.43 Aligned_cols=181 Identities=14% Similarity=0.100 Sum_probs=123.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-HcCCCchhH--HHHHHHHHHHHHHHHHHHhhhc-cCChhHHHHHHH
Q 009099 338 RYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR-SVGIESDVA--ASALVGAANVFGTAVASSLMDR-QGRKNLLTFSFT 413 (543)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~ 413 (543)
+.++.++..=..--+.+++.-..+.+|+.+-.. .+|+++..+ .+..+..-.-+..+++||++|| +|+|+.+..+.+
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 333333333333344444444455555444332 134766655 3344444445577899999999 699999999999
Q ss_pred HHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChh--hhhHHHHHHHHHHHHHHHHHHH
Q 009099 414 GMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASR--IRAKAVALSLGMHWISNFVIGL 491 (543)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~ 491 (543)
+++++.+++.... ........+.+.++..+.+ ..=+....++.|++|++ +|-.++++.+...++|+.++|.
T Consensus 101 l~~iGh~~L~~~~------~~~~~gl~i~L~~I~iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~ 173 (498)
T COG3104 101 LMAIGHLVLAISS------VSGPGGLYIGLALIIVGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPI 173 (498)
T ss_pred HHHHHHHHHhccc------cccccHHHHHHHHHHhccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHH
Confidence 9999999998742 0122344455555554443 34456666889998744 3677899999999999999999
Q ss_pred hhHHHHHhhccccchhhhhHHHHHHHHhhheecc
Q 009099 492 YFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 492 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
+.+++.+..||...|...++-..++.+..++..+
T Consensus 174 i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 174 ITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999988888888776665543
No 238
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.73 E-value=8.4e-07 Score=81.43 Aligned_cols=156 Identities=17% Similarity=0.063 Sum_probs=122.9
Q ss_pred HhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-cccchhhhhhHHHHHHHHHHHHhhhHHHHHHH
Q 009099 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAAGAFLCATAQSVQTMIIG 200 (543)
Q Consensus 122 ~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 200 (543)
....-+|.+..|-|+|..+. |++.+...+......+....+.+|. .+|+..+...+++.++.+.+.+.+....++.
T Consensus 226 ~~~~WLP~ili~~G~sa~~a--G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw- 302 (395)
T COG2807 226 IVIGWLPAILIDRGLSAAEA--GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW- 302 (395)
T ss_pred HHHHHHHHHHHHcCCCHHHh--hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-
Confidence 33447899999999999999 9999999999999999999999976 4777778888888888888878765544444
Q ss_pred HHHHhhhccccccchhhhhhccCCcccc-hhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 201 RVLAGIGIGISSAIVPLYISEISPTEIR-GALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 201 r~l~G~~~g~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
-+++|+|.|..++.+..++.+..+..++ ++..++.+....+=...||.+.|++.|...+|+..++..+...++..+.-+
T Consensus 303 ~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 303 ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 4999999999999999999988775543 444444444444445678999999988888999999888877776665543
Q ss_pred c
Q 009099 280 L 280 (543)
Q Consensus 280 ~ 280 (543)
.
T Consensus 383 ~ 383 (395)
T COG2807 383 R 383 (395)
T ss_pred h
Confidence 3
No 239
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.71 E-value=3.1e-07 Score=90.67 Aligned_cols=141 Identities=14% Similarity=0.068 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCccccc
Q 009099 379 AASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVP 458 (543)
Q Consensus 379 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (543)
........+.+++.+.+|++.||+|.|+++..+.++.+++.++....... ..+..++.-++-|.+.+. ..|..
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~------~~~~~~~~R~lqGl~~g~-~~pa~ 149 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI------GFYLLLVLRFLQGLGQGV-LFPAI 149 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh------cchhhHHHHHHhHHHHhH-HHhhh
Confidence 35667789999999999999999999999999999999988888876442 223344445555555543 34555
Q ss_pred ccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh-hccccchhhhhHHHHHHHHhhheeccc
Q 009099 459 ALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK-FGISTVYLGFATVCLLAVLYIAVNVVE 526 (543)
Q Consensus 459 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (543)
..+..+-.|+++|++..++.....++|.+++-++.|.+.+. .||+..|.+.+++.++..++.+++..+
T Consensus 150 ~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 150 GSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred hceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 55888999999999999999999999999999999999998 999999999999998887766655543
No 240
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.67 E-value=2e-07 Score=94.10 Aligned_cols=129 Identities=12% Similarity=0.022 Sum_probs=96.3
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH-----hhhHHHHH
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT-----AQSVQTMI 198 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~~l~ 198 (543)
....+++.+....+.+.. +++.++..++..++.+++++++||+|+|+.+.++.++..++.+...+ ..+.+.++
T Consensus 251 ~~~~~y~~~y~~~~~~~~--~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (473)
T PRK10429 251 NGFAIYYFTYVIGDADLF--PYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIV 328 (473)
T ss_pred hhheeeEEEEECCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHH
Confidence 334445544443344444 77777777888999999999999999999999888877766655432 34567777
Q ss_pred HHHHHHhhhccccccchhhhhhccCCc-------ccchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 199 IGRVLAGIGIGISSAIVPLYISEISPT-------EIRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 199 ~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
+.-++.|++.+...+...++++|..+. ++.|..++......-+|..+++.+.+++.
T Consensus 329 i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 329 IAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778889999998888888999988652 22366888888888888888887776654
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.67 E-value=6.6e-08 Score=92.77 Aligned_cols=164 Identities=19% Similarity=0.163 Sum_probs=138.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhh
Q 009099 114 ILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS 193 (543)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 193 (543)
+..+...+.+...+=.-.||++..+.-. |........|-.+.-++.+++.+++|+-+++.+++.+..+=.+..++.+|
T Consensus 381 v~mG~g~~lv~tFLfWHled~~~~~~Lf--Gv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n 458 (618)
T KOG3762|consen 381 VVMGAGVGLVFTFLFWHLEDLGGIKTLF--GVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN 458 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcceee--eehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC
Confidence 3334434433334445567788666666 88888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHH-HHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 194 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
.|..+...+++|+..+..+.++.+|+++..|++.|..+.++.... .++|-.+|.++||.+... .|=|..|.+.++.++
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~-fg~~ttf~~~giAcl 537 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER-FGARTTFRIFGIACL 537 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee-ehhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987654 678889999999998876 788999999988887
Q ss_pred HHHHHhcc
Q 009099 273 LLALGMGL 280 (543)
Q Consensus 273 ~~~~~~~~ 280 (543)
+.++....
T Consensus 538 ~~l~~~~~ 545 (618)
T KOG3762|consen 538 VTLALFIS 545 (618)
T ss_pred HHHHHHHH
Confidence 76655444
No 242
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.66 E-value=1e-07 Score=68.35 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=74.7
Q ss_pred HHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHH
Q 009099 116 FGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQ 195 (543)
Q Consensus 116 ~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 195 (543)
.++.+..+.|++|.+++|.++|.++. |++.+..++||.+|.+...++.++..+++.+..+++...+..+.+++.++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~a--g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQA--GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 45667788999999999999999999 9999999999999999999999998899999999999999999999998887
Q ss_pred HHH
Q 009099 196 TMI 198 (543)
Q Consensus 196 ~l~ 198 (543)
.+.
T Consensus 82 ~w~ 84 (85)
T PF06779_consen 82 LWS 84 (85)
T ss_pred HHh
Confidence 653
No 243
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.65 E-value=2.8e-07 Score=94.41 Aligned_cols=135 Identities=19% Similarity=0.146 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccc
Q 009099 380 ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPA 459 (543)
Q Consensus 380 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (543)
...+..++..+|.++.|.++||+|||++++.+.++..++.++.++. .....+...=++.+.+..+...+..
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a---------~~~~~~~~~Rfl~G~~~~~~~~~~~ 193 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA---------PNYWMFLIFRFLSGFFGSGPLTVGF 193 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh---------CcHHHHHHHHHHHHhhccchhHHhH
Confidence 5566778999999999999999999999999999999998777775 2233333333333334445566677
Q ss_pred cccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccC
Q 009099 460 LLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 460 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
.+..|.++++.|+.+..+ ......++.+++.+.+++.. +|++.+++.....++..++ +++.+|.
T Consensus 194 ~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 194 GLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred hhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 788999999999999999 88888899999999998887 7888888877777766555 4444444
No 244
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.4e-06 Score=81.23 Aligned_cols=158 Identities=11% Similarity=0.001 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 009099 359 NAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSG 436 (543)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (543)
.......|.+.+.++.+.... .......+..+..+..+++.+|+|+|+.++.++.+++++++++.-.... ...
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~-----~~y 104 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS-----KSY 104 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh-----hhH
Confidence 344455666666677766654 4555667788899999999999999999999999999999998643221 112
Q ss_pred hhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh-----------------
Q 009099 437 TLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK----------------- 499 (543)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~----------------- 499 (543)
...+.++++.+.+.+. .-...+.++..+.+++....-+.+...+..+|++++|.+.+.+..+
T Consensus 105 ~~FL~~lFila~Gi~~-LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~ 183 (422)
T COG0738 105 GFFLVALFILASGIGL-LETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGA 183 (422)
T ss_pred HHHHHHHHHHHhhhHH-HHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHH
Confidence 2233333333333332 2334445888888888888899999999999999999999998873
Q ss_pred --hccccchhhhhHHHHHHHHhhhe
Q 009099 500 --FGISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 500 --~g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
..++.++...+..+++..+....
T Consensus 184 ~~~~v~~pYl~~~~~lvll~v~~~~ 208 (422)
T COG0738 184 DASSVQFPYLILAGLLVLLAVLILL 208 (422)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 12566777777776666555443
No 245
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.62 E-value=6.8e-07 Score=80.97 Aligned_cols=368 Identities=14% Similarity=0.087 Sum_probs=208.8
Q ss_pred HcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccc
Q 009099 133 DLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISS 212 (543)
Q Consensus 133 ~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 212 (543)
+.|++.++.. .-+.-...-.+.+.-.+.=.+.|-.--|++++.-.+...+.-.+.-+.++.+.+=+.-++.|...+ ..
T Consensus 35 ~~NlT~~~l~-~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aE 112 (433)
T KOG3810|consen 35 DKNLTEDQLT-NEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AE 112 (433)
T ss_pred CCCccHHHHh-cccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HH
Confidence 4455554441 222233334445555677788999999999998888888888888899999999999999999876 55
Q ss_pred cchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC-CCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhc
Q 009099 213 AIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN-PLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQ 291 (543)
Q Consensus 213 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~-~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 291 (543)
.+-++++-+..+++++.++.+...+..-.|...|..++-.+... ..++...-.+......+..+..+++|..++....+
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~ 192 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH 192 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence 67788999999999999999999888888888887777666532 23455555555555555566677777666543333
Q ss_pred CChHHHHHHHHHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 009099 292 GKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS 371 (543)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (543)
+++++.. ..+....+. +....+... ..-..-...+.+..+++.... ..+++....+++..+.+|...+-++
T Consensus 193 ~~~~~~~--v~~~e~~~~-~~~~~~~l~--~~~~~l~~~l~~~y~np~ll~----WSlWwAl~scg~~QV~nY~Q~LW~~ 263 (433)
T KOG3810|consen 193 RLEDKIS--VGDLEEMNP-QASYMSYLR--GAFVLLWRDLQECYSNPRLLK----WSLWWALASCGYYQVTNYTQILWKE 263 (433)
T ss_pred cccccce--eccchhcCc-cchhhHHHH--HHHHHHHHHHHHHhcCchhhh----hHHHHHHhhchhHHHHHHHHHHHHh
Confidence 2222111 000000000 000000000 000000112223334443222 2334444455677888888887777
Q ss_pred cCCCchhH----HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 009099 372 VGIESDVA----ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYV 447 (543)
Q Consensus 372 ~~~~~~~~----~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (543)
...++... .=.+..+.++++.+..|++.-.+.|..-+.++..-...+.+++... ...+.++..+...++.
T Consensus 264 ~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~------~t~~Iw~~Ya~yvlfr 337 (433)
T KOG3810|consen 264 VAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA------QTQHIWVCYAGYVLFR 337 (433)
T ss_pred hCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh------cccceehhhhhHHHHH
Confidence 65333322 2233456677788888888777666533333222222222222221 1124556666666666
Q ss_pred HHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc-----------cccchhhhhHHHHHH
Q 009099 448 LSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG-----------ISTVYLGFATVCLLA 516 (543)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g-----------~~~~~~~~~~~~~~~ 516 (543)
..+......... -+++....+.-|..+|+..++.-+-..+-..+ +.|..| |..-|.+.+++.++.
T Consensus 338 ~~y~l~itiA~~-~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~ 413 (433)
T KOG3810|consen 338 VIYQLTITIATF-QIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIG 413 (433)
T ss_pred hhHhhhhhHHHH-HHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHH
Confidence 666654433333 44555566778888888877655544433332 334333 334567777777777
Q ss_pred HHhhh
Q 009099 517 VLYIA 521 (543)
Q Consensus 517 ~~~~~ 521 (543)
..+.+
T Consensus 414 ~~~~~ 418 (433)
T KOG3810|consen 414 FGIEY 418 (433)
T ss_pred HHHHH
Confidence 66543
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.61 E-value=8.8e-07 Score=90.35 Aligned_cols=139 Identities=18% Similarity=0.160 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccc
Q 009099 378 VAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPV 457 (543)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (543)
........++..++.++.|+++|++|||+.++.+.++..++.++..++. +.....++-++.+.+.+... .+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--------~~~~l~~GR~l~G~g~G~~~-~~ 162 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--------SWYQLIVGRILTGLGVGGAS-VL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhccchhhhh-hc
Confidence 3566777899999999999999999999999999999999999998862 34556666667666665444 34
Q ss_pred cccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh--ccccchhhhhHHHHHHHHhhheecccC
Q 009099 458 PALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF--GISTVYLGFATVCLLAVLYIAVNVVET 527 (543)
Q Consensus 458 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (543)
...+.+|..|++.||...+..+....+|..++ .+.+...++. +|+..+.+..+.+++..+. .++.||.
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 44589999999999999999999999777776 6666666554 7887777777777666665 5556654
No 247
>PRK09669 putative symporter YagG; Provisional
Probab=98.61 E-value=5.9e-07 Score=90.07 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH--hhhHHHHHHHHHHHhhhccccccchhhhhhc
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT--AQSVQTMIIGRVLAGIGIGISSAIVPLYISE 221 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 221 (543)
+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56666777888888999999999999999998888776654443333 3577778888899999999999999999998
Q ss_pred cCCc-------ccchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 222 ISPT-------EIRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 222 ~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
..+. ++.|..++.......+|..+|+.+++.+.
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8752 22366778888888889888888877654
No 248
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.59 E-value=9.7e-07 Score=87.48 Aligned_cols=141 Identities=14% Similarity=0.027 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccc
Q 009099 380 ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPA 459 (543)
Q Consensus 380 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (543)
....+.++.+++.+.++.+.||++..+.+....+...+..++.... ++.+..++.-++.+.+- .+..|...
T Consensus 86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~--------~s~~~~ialr~llGl~e-s~~wP~~~ 156 (495)
T KOG2533|consen 86 LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV--------HSFPGLIALRFLLGLFE-SGGWPGVV 156 (495)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHh-cccchHHH
Confidence 6677889999999999999999996555544443333333222221 12233344444444444 45555666
Q ss_pred cccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH------hhccccchhhhhHHHHHHHHhhheecccCCC
Q 009099 460 LLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN------KFGISTVYLGFATVCLLAVLYIAVNVVETKG 529 (543)
Q Consensus 460 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (543)
.++...+.+++|+..+|+.++..++|+++|+.+...+.. ..||++.|++-+++.++..++.++++|+...
T Consensus 157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 689999999999999999999999999999999888643 4579999999999999998888888876543
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.56 E-value=1.4e-06 Score=81.98 Aligned_cols=151 Identities=17% Similarity=0.153 Sum_probs=125.3
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhh-hhcccchhhhhhHHHHHHHHHHH---HhhhHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD-KFGRTRTFQLDAVPLAAGAFLCA---TAQSVQTMIIGR 201 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~---~~~~~~~l~~~r 201 (543)
+-|+=.+-||++..+. ..+.+....|..++....|++.. |.++++...+++.+..++..+.. ...+.+.+...-
T Consensus 231 LEPygg~Vfgmsv~eT--T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~ 308 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGET--TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGV 308 (403)
T ss_pred cCCchhHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 5566677899999999 99999999999999999999888 67888888888888777765543 447888899999
Q ss_pred HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC---------CCCchHHHHHHhHHHHH
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG---------NPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~---------~~~~wr~~f~~~~~~~~ 272 (543)
++.|++.|.......+.+.+...+++.|.++|.+.....++..++..+++.+.| ...+|-..|.+.++..+
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~ 388 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLL 388 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999989999999999999988888888876543 23567888888877776
Q ss_pred HHHHHh
Q 009099 273 LLALGM 278 (543)
Q Consensus 273 ~~~~~~ 278 (543)
+.+++.
T Consensus 389 ~a~~ll 394 (403)
T PF03209_consen 389 AALVLL 394 (403)
T ss_pred HHHHHH
Confidence 655544
No 250
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.56 E-value=8e-07 Score=79.43 Aligned_cols=143 Identities=16% Similarity=0.099 Sum_probs=97.8
Q ss_pred HHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 009099 352 FQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWK 429 (543)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (543)
....+..+.+..|.+.+.+.++++..+. ......++..+ .++.|.+.|++|++.++.++.+...++..++.......
T Consensus 12 ~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 12 QLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred HHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3344556788899999999999988876 33444556555 48889999999999999999999999998887654321
Q ss_pred ccccccchhHHHHHHHHHHHhhcCc-ccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 009099 430 VLAPYSGTLAVLGTVLYVLSFSLGA-GPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK 499 (543)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 499 (543)
. + ....+....+.+..+.+..+ .........+.+|. .||++.|+.-....+++.+...+...+.+.
T Consensus 91 i--~-~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 91 I--P-SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred c--C-ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 1 1 12223333333333333222 22222234477885 699999999999999998888887776655
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.50 E-value=3.2e-07 Score=86.51 Aligned_cols=179 Identities=15% Similarity=0.055 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhH------HHHHHHH-HHHHHHHHHhhHhhhhhhcccchhhhh
Q 009099 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQ------GWIVSSL-LAGATVGSFTGGSLADKFGRTRTFQLD 177 (543)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~------g~~~s~~-~l~~~i~~~~~g~l~dr~Grr~~~~~~ 177 (543)
.+...+...|+........+.....+.+++++.+.+... .....+. .+++..+-.+...+.|++|||++.+.+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G 384 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG 384 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh
Confidence 344556666766666666666778888888876555411 1111111 223333666778899999999999999
Q ss_pred hHHHHHHHHHHHHhhhH----HHHHH----HHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHh
Q 009099 178 AVPLAAGAFLCATAQSV----QTMII----GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVA 249 (543)
Q Consensus 178 ~~~~~i~~~~~~~~~~~----~~l~~----~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~ 249 (543)
.+++++..+..+...|. ..+++ ..++.-+| .......+-+|.||.+-|+..-|+..+..-.|.++|...
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~ 461 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFG 461 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHH
Confidence 99999999999888661 11222 23333333 334556677999999999999999999999999999988
Q ss_pred hcccCCC----CCchHHHHHHhHHHHHHHHHHhcccCCChh
Q 009099 250 GLPLAGN----PLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (543)
Q Consensus 250 ~~~l~~~----~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~ 286 (543)
-.++.++ ..+.|+.|++.+..+++..+..+++||+..
T Consensus 462 F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 462 FLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 8888761 278999999999999998888888998865
No 252
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.50 E-value=2.5e-07 Score=92.84 Aligned_cols=123 Identities=9% Similarity=0.037 Sum_probs=107.0
Q ss_pred HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh----------hhHHHHHHHH
Q 009099 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA----------QSVQTMIIGR 201 (543)
Q Consensus 132 ~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~l~~~r 201 (543)
+.+|.++... |.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-
T Consensus 281 ~~lG~s~~~~--G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPGGPSFS--GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCCCcchh--hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 5689999998 999999999999999999999999999999999999999887554311 3444555667
Q ss_pred HHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCC
Q 009099 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN 256 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 256 (543)
++.+++.+..+.+...++.+..|+++++...++.....++|..+++.+++.+.+.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999988887653
No 253
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.48 E-value=9.8e-05 Score=74.85 Aligned_cols=156 Identities=18% Similarity=0.163 Sum_probs=122.0
Q ss_pred HHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhh-cccchhhhhhHHHHHHHHHHHHhhh------
Q 009099 121 GVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAAGAFLCATAQS------ 193 (543)
Q Consensus 121 ~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~------ 193 (543)
+....++.++.++++.+.... .-..+.+.-...+..+++++++|-| ||-+.+.++.++..++.++..++..
T Consensus 55 g~~~nlv~ylt~~~~~~~~~a--a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGGA--ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred cchhHHHHHHHHHhccchHHH--HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 344668889999999888766 8888888888889999999999965 8889999998888888655544321
Q ss_pred -------------------HHHHHHHHHHHhhhccccccchhhhhhccCC---cccc---hhhhHHHHHHHHHHHHHHHH
Q 009099 194 -------------------VQTMIIGRVLAGIGIGISSAIVPLYISEISP---TEIR---GALGSVNQLFICVGILAALV 248 (543)
Q Consensus 194 -------------------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~~~r---~~~~~~~~~~~~~G~~~~~~ 248 (543)
...++.+.-+..+|.|+.-+...++-+|-++ ++++ ...+.++....++|..++..
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 1246666778888999999999999999998 3222 36788888899999999888
Q ss_pred hhcccCCCCCchHHHHHHhHHHHHHHHHHhc
Q 009099 249 AGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (543)
Q Consensus 249 ~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 279 (543)
+..+.-++ .+|.+-|.+..+..++.+++++
T Consensus 213 ~~vyiq~~-~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 213 VLVYIQDN-VGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHhhhhc-ccceeeccHHHHHHHHHHHHHH
Confidence 88777655 8999999888877766554433
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.38 E-value=1.1e-05 Score=66.46 Aligned_cols=109 Identities=13% Similarity=0.102 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccC
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 223 (543)
-.-.++.+....+++++.+.+.+++|.|+.+++|.+.+.+-... -+-++.+.++.+-++.|++.+..+++...++.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 44566677777888899999999999999999999998865443 35678889999999999999999999999999999
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHhhccc
Q 009099 224 PTEIRGALGSVNQLFICVGILAALVAGLPL 253 (543)
Q Consensus 224 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 253 (543)
++++|++..+++......+.++|.++...+
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888888888887765443
No 255
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.38 E-value=5.8e-09 Score=104.98 Aligned_cols=156 Identities=16% Similarity=0.090 Sum_probs=100.2
Q ss_pred hhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH--H--h-hh-----H
Q 009099 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA--T--A-QS-----V 194 (543)
Q Consensus 125 ~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--~--~-~~-----~ 194 (543)
...+.+.++.+.+.. . +......+...++.++...+.||+|||++++.+.++.+++.+..+ . . ++ +
T Consensus 274 ~~~~~i~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (451)
T PF00083_consen 274 YYSPSIFENAGISNS-F---LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSI 349 (451)
T ss_pred ccccccccccccccc-c---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 355677777777765 2 112222334445666777999999999999999999888887764 1 1 11 2
Q ss_pred HHHHHHHHHHhhhcc-ccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHH
Q 009099 195 QTMIIGRVLAGIGIG-ISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (543)
Q Consensus 195 ~~l~~~r~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 273 (543)
..+. +-.+..++.+ +..+....+..|.+|.+.|+++.++......++..+++.+...+.+. .+-...+++.+..+++
T Consensus 350 ~~i~-~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 350 LSIV-FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-LGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccce-eeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccchhhHHHHHH
Confidence 2222 2222222222 34456668889999999999999999998888888888877766654 3313344444444444
Q ss_pred -HHHHhcccCCChh
Q 009099 274 -LALGMGLSPESPR 286 (543)
Q Consensus 274 -~~~~~~~~~e~~~ 286 (543)
..+..+++||+..
T Consensus 428 ~~i~~~~~lpET~g 441 (451)
T PF00083_consen 428 AIIFVYFFLPETKG 441 (451)
T ss_pred HHhheeEEEeeCCC
Confidence 4455666799864
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.37 E-value=1e-05 Score=79.76 Aligned_cols=136 Identities=21% Similarity=0.176 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCccccccccccc
Q 009099 385 GAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPE 464 (543)
Q Consensus 385 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (543)
++..++..+..|.++||+|||..+........+..+.+.+.. ++.++ ..-..+..........++++|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~----------~~~~~--~~~l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG----------YWFFL--LLGLSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH----------HHHhh--hcccccchhhhhhhhhhheee
Confidence 577788899999999999999999888888777777776631 22222 111122222344556668999
Q ss_pred ccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecccCCCCCH
Q 009099 465 IFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVVETKGRSL 532 (543)
Q Consensus 465 ~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (543)
....+.|....|+.+.....+..++|.+.+.+....|+..+|.+..+..++..+....+.||+..++.
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~ 207 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE 207 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc
Confidence 99999999999999999999999999999999999999999999999999998888888888755443
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.35 E-value=3.5e-05 Score=71.56 Aligned_cols=158 Identities=19% Similarity=0.147 Sum_probs=99.9
Q ss_pred HHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHH
Q 009099 364 YSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVL 441 (543)
Q Consensus 364 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (543)
|.-.++++.|++..+. .+....+...+...+.|.++||+|||+.-+...++..++++.-... +....++
T Consensus 56 Y~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~---------~~~~L~~ 126 (354)
T PF05631_consen 56 YLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSS---------NYPVLLL 126 (354)
T ss_pred hhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhcc---------ccHHHHH
Confidence 3334456788876655 4555556777888899999999999998888888888877654331 2344444
Q ss_pred HHHHHHHHhhcCcccccccccccc----cChhhhhHHHHHHHHH-HHHHHHHHHHhhHHHHHhhcc--ccchhhhhHHHH
Q 009099 442 GTVLYVLSFSLGAGPVPALLLPEI----FASRIRAKAVALSLGM-HWISNFVIGLYFLSVVNKFGI--STVYLGFATVCL 514 (543)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~~~~~~g~--~~~~~~~~~~~~ 514 (543)
+-++-+...+......=..++.|. +|++..+...+..... +.+-++++..+...+.+..+. ..+|....++++
T Consensus 127 GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~ 206 (354)
T PF05631_consen 127 GRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLA 206 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHH
Confidence 445544444433333322244444 4666666666655533 344455555666666776654 678888888888
Q ss_pred HHHHhhheecccCCCC
Q 009099 515 LAVLYIAVNVVETKGR 530 (543)
Q Consensus 515 ~~~~~~~~~~~~~~~~ 530 (543)
++.+++....+|..+.
T Consensus 207 ~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 207 VAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHhcccccCCC
Confidence 8887777666766543
No 258
>PRK11462 putative transporter; Provisional
Probab=98.24 E-value=3.8e-05 Score=77.12 Aligned_cols=126 Identities=13% Similarity=0.045 Sum_probs=78.7
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh--hHHHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGRVL 203 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l 203 (543)
...++.+...-+++.. +++.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+ +.+.+++.-++
T Consensus 250 ~~~y~~~y~~g~~~~~--~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 327 (460)
T PRK11462 250 AMMYYVTWILGTPEVF--VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFV 327 (460)
T ss_pred HhhhhhhhhcCChHHH--HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 4444444443333334 6778888899999999999999999999987765555544444433332 23334455566
Q ss_pred HhhhccccccchhhhhhccCCc-------ccchhhhHHHHHHHHHHHHHHHHhhccc
Q 009099 204 AGIGIGISSAIVPLYISEISPT-------EIRGALGSVNQLFICVGILAALVAGLPL 253 (543)
Q Consensus 204 ~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~l 253 (543)
.|++.+...+...+++.|..+. ++.|..++......-+|..+++.+++++
T Consensus 328 ~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 328 IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7877776666666677766552 2225555666666666666666555443
No 259
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.24 E-value=1.4e-05 Score=77.70 Aligned_cols=128 Identities=20% Similarity=0.266 Sum_probs=96.6
Q ss_pred hhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhh--hHHHHHHHH
Q 009099 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGR 201 (543)
Q Consensus 124 ~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r 201 (543)
+....+.. +++++..+....+.......+..++.+++.++++|+|+|+++.++.++..++.++..+.+ +.+.+++..
T Consensus 256 ~s~~~yy~-~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~ 334 (467)
T COG2211 256 GSIMVYYV-TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVAL 334 (467)
T ss_pred hhhhheeE-EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHH
Confidence 33444433 234444444447788888888888899999999999999999999999999999888875 788888999
Q ss_pred HHHhhhccccccchhhhhhccCCc------ccc-hhhhHHHHHHHHHHHHHHHHhhcc
Q 009099 202 VLAGIGIGISSAIVPLYISEISPT------EIR-GALGSVNQLFICVGILAALVAGLP 252 (543)
Q Consensus 202 ~l~G~~~g~~~~~~~~~i~~~~~~------~~r-~~~~~~~~~~~~~G~~~~~~~~~~ 252 (543)
++.+++.+...+...++++|..+- ++| |...+......=+|..++..+.++
T Consensus 335 ~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 335 IIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred HHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888876643 222 666666666666666666544444
No 260
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.21 E-value=4.5e-05 Score=78.77 Aligned_cols=156 Identities=13% Similarity=0.109 Sum_probs=100.1
Q ss_pred HHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhc-cCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHH
Q 009099 366 TSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDR-QGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLG 442 (543)
Q Consensus 366 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (543)
.++.+.++++.... .........-+..+++|+++|+ +|+++.+.++.++..++.+++.+...............+++
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 33334467666544 3334444555677889999997 79999999999998888887776422111000011122333
Q ss_pred HHHHHHHhhcCcccccccccccccChh---hhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh-------ccccchhhhhHH
Q 009099 443 TVLYVLSFSLGAGPVPALLLPEIFASR---IRAKAVALSLGMHWISNFVIGLYFLSVVNKF-------GISTVYLGFATV 512 (543)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~-------g~~~~~~~~~~~ 512 (543)
+.+..+|.+ +.-+...+...|.++++ .+-....+++...++|+.+++.+.+++.+.. +|...|.+.+++
T Consensus 92 LaLia~G~G-giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~ 170 (654)
T TIGR00926 92 LALIALGTG-GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAIL 170 (654)
T ss_pred HHHHHhhcc-ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHH
Confidence 333333333 34455555777777643 4678899999999999999999999887543 476777777777
Q ss_pred HHHHHHhhhe
Q 009099 513 CLLAVLYIAV 522 (543)
Q Consensus 513 ~~~~~~~~~~ 522 (543)
.+++.++...
T Consensus 171 m~ia~lvf~~ 180 (654)
T TIGR00926 171 MILALIVFMA 180 (654)
T ss_pred HHHHHHHHHH
Confidence 7777665543
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.14 E-value=1.2e-05 Score=57.35 Aligned_cols=68 Identities=22% Similarity=0.260 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH
Q 009099 112 GAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (543)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 181 (543)
..+......+.+.|.+|...++.|++..++ |.+.++..+...++++++|.++||+++++..+....++
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~i--Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQLGLSPSQI--GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 345555556677778888888899999999 99999999999999999999999999998877765544
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.09 E-value=4.3e-05 Score=73.51 Aligned_cols=142 Identities=12% Similarity=0.087 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHH--cCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhh-----hhcccchhhh-hhHH
Q 009099 109 ACLGAILFGYHLGVVNGALEYLAKD--LGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD-----KFGRTRTFQL-DAVP 180 (543)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~d-----r~Grr~~~~~-~~~~ 180 (543)
+.+..++.+...+.....+|.+.++ -+++.++. |.. |.-..-+.+ -++|.++.| |+||||.-++ .-.+
T Consensus 5 L~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~--~~f-Sla~~PfSl-KlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 5 LVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQ--AIF-SLASYPFSL-KLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred HHHHHHHcCcccccccccchhhhccccCCCChhHh--eee-eeeechhHH-HHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 3455667777777755688998888 67887776 432 222222221 345666666 8999986543 2233
Q ss_pred HHHHHHHHHHhh------------------------hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHH
Q 009099 181 LAAGAFLCATAQ------------------------SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQ 236 (543)
Q Consensus 181 ~~i~~~~~~~~~------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~ 236 (543)
.++..+..+... +...+....++.=+-++.--.++-.+.-....+++++.|..-..
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 333333332211 11123333334444445444555666667778888999999999
Q ss_pred HHHHHHHHHHHHhhcccC
Q 009099 237 LFICVGILAALVAGLPLA 254 (543)
Q Consensus 237 ~~~~~G~~~~~~~~~~l~ 254 (543)
.+.+.|..++..+.-.+.
T Consensus 161 vG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLALN 178 (544)
T ss_pred hHhhhhHHHHHHHHHhhC
Confidence 999999888877655544
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.09 E-value=0.00095 Score=64.43 Aligned_cols=142 Identities=12% Similarity=0.020 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHcCCC---cchhhHHHHHHHHHH-HHHHHHHhhHhhhhhhcccchhhhhhHHHHH
Q 009099 108 VACLGAILFGYHLGVVNGALEYLAKDLGIA---ENTVLQGWIVSSLLA-GATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s---~~~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 183 (543)
.+.+..++..++.+ .+-.+.+.+.++ ++.+ .++-+...+ +..+..++.+++.+++.+++++-+.+..+..
T Consensus 31 pl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I--~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~ 104 (509)
T COG3202 31 PLALLFFCILFNYN----LLRSLKDSLVVTRQGAESI--SFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLG 104 (509)
T ss_pred HHHHHHHHHHHHHH----HHHHhhhheEeecCcchhh--HHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 33444444444444 556667777554 3344 777777777 7778889999999999999999888888888
Q ss_pred HHHHHHHh---------hh-----------------------HHHHHHHHHHHhhhcccccc-chhhhhhccCCcccchh
Q 009099 184 GAFLCATA---------QS-----------------------VQTMIIGRVLAGIGIGISSA-IVPLYISEISPTEIRGA 230 (543)
Q Consensus 184 ~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~ 230 (543)
..+++++. ++ .|...+...+.=+-...... .-.....|.+..+|-.|
T Consensus 105 fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakR 184 (509)
T COG3202 105 FFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKR 184 (509)
T ss_pred HHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhh
Confidence 77777764 11 02222222222222222222 23345678888888899
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccCC
Q 009099 231 LGSVNQLFICVGILAALVAGLPLAG 255 (543)
Q Consensus 231 ~~~~~~~~~~~G~~~~~~~~~~l~~ 255 (543)
..++++.+.+++..++..+..++..
T Consensus 185 Fy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 185 FYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998888887765
No 264
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.09 E-value=0.00099 Score=63.27 Aligned_cols=110 Identities=13% Similarity=-0.055 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH---HHHHHHH
Q 009099 113 AILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA---AGAFLCA 189 (543)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~---i~~~~~~ 189 (543)
.+..-..+..+..+.++..+++-.+.. . ......+.+...+...+...+--+..-|.-..++..++. +..+.+.
T Consensus 27 GiG~LlpWN~fiTa~~y~~~~~~~~~~-~--~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~ 103 (406)
T KOG1479|consen 27 GIGTLLPWNMFITASDYYYYRFPGYHN-S--KNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLD 103 (406)
T ss_pred hcccccchHhhhccHHHHHhhcCCCch-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444566667788888888755444 2 344455554444444444444444432222222222211 1112222
Q ss_pred Hh---------hhHHHHHHHHHHHhhhccccccchhhhhhccCCcc
Q 009099 190 TA---------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTE 226 (543)
Q Consensus 190 ~~---------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 226 (543)
++ ..++..++.-.+.+++.|......+...++. |++
T Consensus 104 ~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ 148 (406)
T KOG1479|consen 104 LALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSE 148 (406)
T ss_pred HHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHH
Confidence 22 3466666777888888887777766665554 544
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.03 E-value=0.00042 Score=68.28 Aligned_cols=111 Identities=15% Similarity=0.069 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCh-hHHHHHHHHHHHHHHHHHHHHhhcc--cc--cccchhHHHHHHHHHHHhhcCc
Q 009099 380 ASALVGAANVFGTAVASSLMDRQGRK-NLLTFSFTGMAASMLLLSLSFTWKV--LA--PYSGTLAVLGTVLYVLSFSLGA 454 (543)
Q Consensus 380 ~~~~~~~~~~~~~~~~g~l~d~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~ 454 (543)
....+.++..+|+.+..+.. .-++| +.+.+..+.=.+...++.++..... .+ -.+.+..++..++++..-+. .
T Consensus 312 ~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy-~ 389 (437)
T TIGR00939 312 CFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY-L 389 (437)
T ss_pred HHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH-H
Confidence 56677899999998665432 11222 1333333333333333333322110 00 01223333333333333322 2
Q ss_pred ccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHh
Q 009099 455 GPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLY 492 (543)
Q Consensus 455 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 492 (543)
......+..+..++++|..+-.++...-.+|-.+|..+
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444567788888888888888888888887777654
No 266
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.91 E-value=0.0025 Score=63.43 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=75.0
Q ss_pred HHHHHHHHH-HHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh---------h---------------------
Q 009099 144 GWIVSSLLA-GATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---------Q--------------------- 192 (543)
Q Consensus 144 g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---------~--------------------- 192 (543)
..+-....+ ...+...+..++++++++.+++-+....+.....+.++. +
T Consensus 61 ~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~ 140 (491)
T PF03219_consen 61 PFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAM 140 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHH
Confidence 555444444 445667789999999999999887777776666666553 1
Q ss_pred -hHHHHHHHHHHHhhhcccccc-chhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC
Q 009099 193 -SVQTMIIGRVLAGIGIGISSA-IVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (543)
Q Consensus 193 -~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 255 (543)
+.|.+.+..+..-+-.....+ .-..+..|.++.+|-.+..++++.+.++|.++++.+..++..
T Consensus 141 ~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 141 FRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222222222222222 245677899999999999999999999999988887777655
No 267
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.90 E-value=0.00014 Score=70.98 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=86.7
Q ss_pred chhhhhhHHHHHHHHHHHHh---hh------HHHHHHHHHHHhhhccccccchhhhhhccCCcc---cchhhhHHHHHHH
Q 009099 172 RTFQLDAVPLAAGAFLCATA---QS------VQTMIIGRVLAGIGIGISSAIVPLYISEISPTE---IRGALGSVNQLFI 239 (543)
Q Consensus 172 ~~~~~~~~~~~i~~~~~~~~---~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 239 (543)
|.++++.++..+|.++..++ .+ .+.++++-++.++|.|+.-+....+.+|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45678888888888874443 22 267889999999999999999999999999876 3467888999999
Q ss_pred HHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcc
Q 009099 240 CVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL 280 (543)
Q Consensus 240 ~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 280 (543)
++|..++..+.+++.++ .+|.+.|.+.++..++..+.++.
T Consensus 82 n~G~~~~~~~~~~i~~~-~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQN-YGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHC-S-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccc-cchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999999998866 89999999998888776655444
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.88 E-value=0.00011 Score=71.83 Aligned_cols=147 Identities=13% Similarity=0.014 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCC-hhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCccc
Q 009099 378 VAASALVGAANVFGTAVASSLMDRQGR-KNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGP 456 (543)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (543)
+.......++..++.++.|+...|.++ |+.++.+.++++++.++....... + +....+....=+..|.+.+...
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~---~--~~~~y~mL~~R~l~Gvg~~n~a 148 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYV---P--NGVKYLMLVARILTGVGVGNFA 148 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhc---c--cchHHHHHHHHHHcCcCcccHH
Confidence 445566788999999999999999886 888999999999999888433221 1 1122233333333344444555
Q ss_pred ccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHh--h-----------ccccchhhhhHHHHHHHHhhhee
Q 009099 457 VPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNK--F-----------GISTVYLGFATVCLLAVLYIAVN 523 (543)
Q Consensus 457 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~--~-----------g~~~~~~~~~~~~~~~~~~~~~~ 523 (543)
..-.|+++..-.+.|.++++..+....+|.++||.+...+... . -|..+-++.+++.++..++...+
T Consensus 149 ~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~ 228 (488)
T KOG2325|consen 149 VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFF 228 (488)
T ss_pred HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhh
Confidence 6667888877777899999988888888888887654333211 1 14456777788888887777777
Q ss_pred cccCCC
Q 009099 524 VVETKG 529 (543)
Q Consensus 524 ~~~~~~ 529 (543)
.+|.++
T Consensus 229 f~E~~~ 234 (488)
T KOG2325|consen 229 FKEVYR 234 (488)
T ss_pred eeeccc
Confidence 766543
No 269
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.57 E-value=0.0032 Score=51.98 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccc
Q 009099 380 ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPA 459 (543)
Q Consensus 380 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (543)
...+......+..++.+.+.+++|.|+.+.++.+...+-....... +.+..+....+.+.+.+..+....
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~---------~~~~l~~~s~l~G~~~a~lW~aqg- 111 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP---------NSYTLYPASALLGFGAALLWTAQG- 111 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHhhhhHHhhHhhh-
Confidence 4455556677788889999999999999999887777655554432 234455556666666665444433
Q ss_pred cccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHH
Q 009099 460 LLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 460 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
.++.+...++.+++..++...+.+.+.++|..+.-.+.
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47778888889999999999999988888877655543
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.56 E-value=0.0011 Score=65.70 Aligned_cols=155 Identities=19% Similarity=0.178 Sum_probs=94.1
Q ss_pred HHHHHHcCCCchhHHH-HHHHHHHHHHHHHHHHhhhcc-----CChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhH
Q 009099 366 TSVFRSVGIESDVAAS-ALVGAANVFGTAVASSLMDRQ-----GRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLA 439 (543)
Q Consensus 366 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (543)
+.+.++++.++..... ......--...++.|.++|-+ .||..++++.++..++.+.++..... ..+....
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~----~~s~~~~ 89 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS----ESSAAIA 89 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc----cchhhhH
Confidence 3445668888776522 111122234567899999985 34555566666655555544442110 1112222
Q ss_pred HHHHHHHHHHhhcCccccccccccccc---ChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHH
Q 009099 440 VLGTVLYVLSFSLGAGPVPALLLPEIF---ASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLA 516 (543)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 516 (543)
.+..++...+... .-.+.-+++.|.. |.+ +|...+....+..+|++++..+.|.+.+..+++..|.+.+.+..+.
T Consensus 90 ~~~l~la~~g~a~-~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 90 VVLLFLASFGYAF-ADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred HHHHHHHHHHHHH-HHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 2333333333322 1223333455554 444 7888899999999999999999999999999999998888877777
Q ss_pred HHhhheeccc
Q 009099 517 VLYIAVNVVE 526 (543)
Q Consensus 517 ~~~~~~~~~~ 526 (543)
.+..++..+|
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 6655555555
No 271
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.54 E-value=0.0014 Score=62.64 Aligned_cols=160 Identities=16% Similarity=0.026 Sum_probs=95.2
Q ss_pred chhHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHH
Q 009099 338 RYWKVVSVGAALFLFQQ---LAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTG 414 (543)
Q Consensus 338 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 414 (543)
++.|.+++...+..+.+ +..|..+..+...++. ..+...+...++.+..++..+.+.|+.||+|-|...+++..+
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg--s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~l 118 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG--SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVL 118 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc--chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHH
Confidence 34444444444433322 3334455555544433 222334477778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhH
Q 009099 415 MAASMLLLSLSFTWKVLAPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFL 494 (543)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 494 (543)
..++..+=.........+...-.....+-.+......... .+..-+..-.+|+++|++|..+..+...+|.+++..+-.
T Consensus 119 n~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim-~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 119 NGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFIL-GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhh-ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 9888877655433211111011122333333333322211 121213344578999999999999988899888877666
Q ss_pred HHHHhh
Q 009099 495 SVVNKF 500 (543)
Q Consensus 495 ~~~~~~ 500 (543)
.+..+.
T Consensus 198 ilV~~~ 203 (480)
T KOG2563|consen 198 ILVPSS 203 (480)
T ss_pred eecCCC
Confidence 555443
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.53 E-value=0.00087 Score=64.25 Aligned_cols=106 Identities=21% Similarity=0.135 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHH-----HHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhh
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA-----AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLY 218 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~-----i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 218 (543)
.+...+|.+|..++.--...+ |+ |++.+.+.+-.. +.....-+.++.|.+++.-+..|+..|..++.....
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~ 359 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYR 359 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 777888887766664432221 33 444433333222 222233456899999999999999999999999999
Q ss_pred hhccCCcccchhhhHHHHHHHHHHHHHHHHhhccc
Q 009099 219 ISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (543)
Q Consensus 219 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 253 (543)
+.|-.++++|..++|....+.++|..++.+++.++
T Consensus 360 I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 360 ISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888665
No 273
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.51 E-value=0.00099 Score=58.89 Aligned_cols=243 Identities=9% Similarity=0.031 Sum_probs=109.4
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhcccCC----CCCchHHHHHHhHHHHHHHHHHhcccCCChhHHHhcCChHHHHHHH
Q 009099 226 EIRGALGSVNQLFICVGILAALVAGLPLAG----NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSI 301 (543)
Q Consensus 226 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~----~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 301 (543)
++|+....+...+.++|.++..+.-..-.+ ....|++.+.+.+++.++-+++..++-.+-+.. .++++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~-~~~~k~~----- 75 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIY-SPKEKQE----- 75 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-Ccccccc-----
Confidence 557777778888888887765443211101 124599999998888776655554442110000 0000000
Q ss_pred HHHhCchhhHHHHHHHHHhccCCCCcccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCC------
Q 009099 302 QTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIE------ 375 (543)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 375 (543)
+.+.+.+++.+.++.+|++.-|...+.......... ......+...+....+.+
T Consensus 76 ------------------k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~V--~p~t~~~~~~~~~~s~~ni~~~~~ 135 (267)
T PF07672_consen 76 ------------------KENSTLSKKPSYKSILKEKETWKWILIYGIWLVVVV--FPFTPSWFNILIWISPANIKSVVS 135 (267)
T ss_pred ------------------cccccccccchHHHHHccchHHHHHHHHHHHheeEE--EeccchhHhHhhhcCccccccccc
Confidence 001122344677888888887776655554433211 111122222222221110
Q ss_pred chh-----H-HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHh-hcccccccchhHHHHHHHHHH
Q 009099 376 SDV-----A-ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFT-WKVLAPYSGTLAVLGTVLYVL 448 (543)
Q Consensus 376 ~~~-----~-~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 448 (543)
... . ...+...+.++|.+..|...+..-+||..+...+.+.+.+.++..... .................++.+
T Consensus 136 ~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G 215 (267)
T PF07672_consen 136 GGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAG 215 (267)
T ss_pred ccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 111 1 222233444455566666666533344333333222222222221111 111111111222333333444
Q ss_pred HhhcCcccccccccccc--cChhhhhHHHHHHHHHHHHHHHHHHHhhH
Q 009099 449 SFSLGAGPVPALLLPEI--FASRIRAKAVALSLGMHWISNFVIGLYFL 494 (543)
Q Consensus 449 ~~~~~~~~~~~~~~~~~--~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 494 (543)
.+..+..++...+..|. ..|++.|.-.|+.-.++++.-.+.-.+..
T Consensus 216 ~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S 263 (267)
T PF07672_consen 216 FFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILS 263 (267)
T ss_pred HHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555544333333 23555677777777666666555544443
No 274
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.37 E-value=0.0019 Score=46.11 Aligned_cols=64 Identities=13% Similarity=0.214 Sum_probs=50.4
Q ss_pred HHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHH
Q 009099 351 LFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTG 414 (543)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 414 (543)
.+..++....+.-|.+.++++.|++.... ...+..+..+++.++.|.++||.++++.......+
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34444556777888888888899988755 66777889999999999999999998877665443
No 275
>PRK03612 spermidine synthase; Provisional
Probab=97.27 E-value=0.0098 Score=60.27 Aligned_cols=143 Identities=16% Similarity=0.071 Sum_probs=82.1
Q ss_pred HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH--HH-HHHHHH----HHhhhH-HHHHHH
Q 009099 129 YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP--LA-AGAFLC----ATAQSV-QTMIIG 200 (543)
Q Consensus 129 ~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~--~~-i~~~~~----~~~~~~-~~l~~~ 200 (543)
.+.--+|-+.... +.+.++|++|.++|+.+++++.++.-++.. .+-+.+ .+ ++..+. ++...+ ..++..
T Consensus 40 ~l~~~~G~s~~~~--~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~ 116 (521)
T PRK03612 40 LASYLLGDSVTQF--STVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVL 116 (521)
T ss_pred HHHHHhCchHHHH--HHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567776666 999999999999999999988744333322 111111 11 111111 111111 122334
Q ss_pred HHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHH
Q 009099 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (543)
Q Consensus 201 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 275 (543)
-++.|+..|+..|....+..+... ++-+...|-......+|.++|.++.+++.-...|-....++.+.+.+++.
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 456778888887777766654332 22456677777888888888888877655333554444445555554444
No 276
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.72 E-value=0.0075 Score=58.89 Aligned_cols=119 Identities=14% Similarity=0.023 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHHHHhhcCcccccccccccccChh---hhhHHHHHHHHH
Q 009099 406 NLLTFSFTGMAASMLLLSLSFTWKVL-APYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASR---IRAKAVALSLGM 481 (543)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~ 481 (543)
|+++++.++..+|.+++.+....... .........+++.++..|.+ +.=+....+..|.++++ .+.+....++..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G-~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTG-GIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHH-CCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccc-cccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 56778888888998887666443322 11122344555555555544 34455556788888654 567788889999
Q ss_pred HHHHHHHHHHhhHHHHHhhccccchhhhhHHHHHHHHhhheecc
Q 009099 482 HWISNFVIGLYFLSVVNKFGISTVYLGFATVCLLAVLYIAVNVV 525 (543)
Q Consensus 482 ~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 525 (543)
.++|..++..+.+++.++.||...|.+.++..+++.+..+...+
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999998888888776655443
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.55 E-value=0.11 Score=51.54 Aligned_cols=109 Identities=7% Similarity=-0.133 Sum_probs=71.1
Q ss_pred HHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccc--cc--------------c------chhHHHHHHHHH
Q 009099 390 FGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLA--PY--------------S------GTLAVLGTVLYV 447 (543)
Q Consensus 390 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------~------~~~~~~~~~~~~ 447 (543)
+..++-+++++|++|++............++++.+........ +. . ..+......+..
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~ 138 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMA 138 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHH
Confidence 3367789999999999988777666666665555543211100 00 0 011111222222
Q ss_pred HHhhcCccc-ccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 448 LSFSLGAGP-VPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 448 ~~~~~~~~~-~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
-.++....+ +.+.+++|.+..++..+-.++....+++|..+++.+...+.+
T Consensus 139 elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 139 ELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223322333 677789999999999999999999999999999998888763
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.55 E-value=0.00049 Score=64.96 Aligned_cols=111 Identities=14% Similarity=0.024 Sum_probs=2.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcc---cc--cccchhHHHHHHHHHHHhhcCc
Q 009099 380 ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKV---LA--PYSGTLAVLGTVLYVLSFSLGA 454 (543)
Q Consensus 380 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~ 454 (543)
.+..+.++..+|+.+.++..-+..+++.+.+..+.-.+...++..+...+. .+ -.+.++.++..+++ ++..|+
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~--g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLF--GFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHH--HHccch
Confidence 456678999999998887532212333333333333333333333211100 00 01122223333333 333333
Q ss_pred -ccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHh
Q 009099 455 -GPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLY 492 (543)
Q Consensus 455 -~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 492 (543)
......+..+..++++|..+-.++...-.+|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555577788888888887777777777777666654
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.26 E-value=0.00088 Score=68.02 Aligned_cols=149 Identities=13% Similarity=-0.012 Sum_probs=0.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHH
Q 009099 349 LFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSF 426 (543)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 426 (543)
+..+.+......+..-++.+-+.++++.... +....-++.++..++..++.+|..|-+.+-.+.++++++.+++++..
T Consensus 10 ~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPh 89 (539)
T PF03137_consen 10 LLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPH 89 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccH
Confidence 3333334444455555666667777776644 66667788888889999999998888888899999999998887653
Q ss_pred hhcccc--------------------------------------cccchhHHHHHHHHHHHhh---cCcccccccccccc
Q 009099 427 TWKVLA--------------------------------------PYSGTLAVLGTVLYVLSFS---LGAGPVPALLLPEI 465 (543)
Q Consensus 427 ~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 465 (543)
+....- ...........++.....+ ....++..+|+.|.
T Consensus 90 f~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDn 169 (539)
T PF03137_consen 90 FLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDN 169 (539)
T ss_dssp --------------------------------------------------------------SSS---------------
T ss_pred hhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccc
Confidence 321100 0000111111111111122 22456777899999
Q ss_pred cChhhhhHHHHHHHHHHHHHHHHHHHhhHHHH
Q 009099 466 FASRIRAKAVALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 466 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
++++..+...|+..+...+|-++|=.+.+...
T Consensus 170 v~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 170 VSKKNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp --------------------------------
T ss_pred cccccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 99999999999999998888877766665544
No 280
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.19 E-value=0.15 Score=50.05 Aligned_cols=138 Identities=19% Similarity=0.167 Sum_probs=96.0
Q ss_pred HHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHH---h
Q 009099 115 LFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT---A 191 (543)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~ 191 (543)
+-+++.-.+..........-|+++..+ |..-+.-.+....+.+.+.++.+|+|..|.=++++..-.++..++.. .
T Consensus 269 lLY~TVLsf~~lmt~yl~~~G~s~~~i--gi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~ 346 (432)
T PF06963_consen 269 LLYFTVLSFGGLMTAYLKSQGYSPSVI--GIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWA 346 (432)
T ss_pred HHHHHHhcCcHHHHHHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhc
Confidence 333333334445555555559999888 99999999999999999999999999888777776654443333322 1
Q ss_pred ---h----hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 192 ---Q----SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 192 ---~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
+ +...++.+-++.=+|.=+.-....-++.|..|+++||...|......++--++...++-.+.
T Consensus 347 ~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 347 PGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2 23333333344444444456667788999999999999999999998888777777665443
No 281
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.06 E-value=0.15 Score=50.23 Aligned_cols=101 Identities=19% Similarity=0.176 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhhHhhhh---hhcccchhhhhhHHHHHHHHHHHHh------------------hhHHHHHHHHHHHhhhc
Q 009099 150 LLAGATVGSFTGGSLAD---KFGRTRTFQLDAVPLAAGAFLCATA------------------QSVQTMIIGRVLAGIGI 208 (543)
Q Consensus 150 ~~l~~~i~~~~~g~l~d---r~Grr~~~~~~~~~~~i~~~~~~~~------------------~~~~~l~~~r~l~G~~~ 208 (543)
-.+|..+++.+.+.+++ ++||++.+.++.++..++.++.-.. +++...++.-++.|++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 34444455555666664 5789999999888888877766543 24566777789999999
Q ss_pred cccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhc
Q 009099 209 GISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL 251 (543)
Q Consensus 209 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 251 (543)
+......+.++.+.. +++|..+.++...-..++..++.....
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999 566888988888888887776554443
No 282
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.03 E-value=0.25 Score=46.26 Aligned_cols=142 Identities=22% Similarity=0.166 Sum_probs=81.9
Q ss_pred HHHHHHHHHHcCCCc----hhHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccch
Q 009099 362 VYYSTSVFRSVGIES----DVAASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGT 437 (543)
Q Consensus 362 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (543)
....+.+....+... .........+...++.++.|.+.||.|||+.+..+.....++.+...+... ....
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 95 (338)
T COG0477 22 SPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------VGLA 95 (338)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------chHH
Confidence 334444444444433 234555566777777799999999999997777666553343333322210 0112
Q ss_pred hHHHHHHHHHHHhhcCcccccccccccccCh-hhhhHHHHHHHH-HHHHHHHHHHHhhHHHHHh--hccccchhhhh
Q 009099 438 LAVLGTVLYVLSFSLGAGPVPALLLPEIFAS-RIRAKAVALSLG-MHWISNFVIGLYFLSVVNK--FGISTVYLGFA 510 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~g~~~~~~~~g~~~~~--~g~~~~~~~~~ 510 (543)
.........+.+.+ ...+....++.|..|. +.++...+.... ...++..+++.+.+.+... .+|+..+....
T Consensus 96 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (338)
T COG0477 96 LLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAA 171 (338)
T ss_pred HHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 22222222222222 3445666688888887 568888888888 5777888888776666554 34555444333
No 283
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.86 E-value=0.07 Score=55.16 Aligned_cols=179 Identities=12% Similarity=0.015 Sum_probs=110.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHH
Q 009099 347 AALFLFQQLAGINAVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSL 424 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 424 (543)
..+..+.+......+..-+..+-+.++++.... +....-++..+...+..+...|..|-+++-++.++++++.+++++
T Consensus 102 l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~al 181 (735)
T KOG3626|consen 102 LSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFAL 181 (735)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhC
Confidence 333333333333444455555555666665543 444456777788888889999999989999999999999998887
Q ss_pred HHhhcc--------------cc--------------------------cccc--hhHHHHHHHHHHH-hhcCcccccccc
Q 009099 425 SFTWKV--------------LA--------------------------PYSG--TLAVLGTVLYVLS-FSLGAGPVPALL 461 (543)
Q Consensus 425 ~~~~~~--------------~~--------------------------~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~ 461 (543)
.-.... .. .... .+.++.+.-+..| ......++..+|
T Consensus 182 PHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisY 261 (735)
T KOG3626|consen 182 PHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISY 261 (735)
T ss_pred hHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcc
Confidence 521100 00 0111 1212222222222 222346677779
Q ss_pred cccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhh------------------c-cccchhhhhHHHHHHHHhhhe
Q 009099 462 LPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKF------------------G-ISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 462 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~------------------g-~~~~~~~~~~~~~~~~~~~~~ 522 (543)
+.|...++..+...|+.+++..+|-++|=.+.+.....+ | |...|++.+.+.++..+..++
T Consensus 262 iDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 262 IDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred ccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998999999999998888888766666655321 1 333466666677776665555
Q ss_pred ecc
Q 009099 523 NVV 525 (543)
Q Consensus 523 ~~~ 525 (543)
+-+
T Consensus 342 fPk 344 (735)
T KOG3626|consen 342 FPK 344 (735)
T ss_pred Ccc
Confidence 433
No 284
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.80 E-value=1.6 Score=40.49 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=52.7
Q ss_pred HHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccC
Q 009099 151 LAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (543)
Q Consensus 151 ~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 223 (543)
.+......++.+.+..++|-|+.++++....... +..=+=+.+..++-.-...|++.+..+..--+++++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3444455666668999999999998877665542 22223377888999999999999999887777776543
No 285
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.72 E-value=0.099 Score=51.79 Aligned_cols=60 Identities=18% Similarity=0.217 Sum_probs=51.9
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhc
Q 009099 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL 251 (543)
Q Consensus 192 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 251 (543)
++-+..++..++.|+..|-....+..+..+..+++||..+..+...+..+|..+|..++-
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777788999999999999999999999999999999999999888888888877653
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.20 E-value=0.44 Score=46.18 Aligned_cols=148 Identities=12% Similarity=0.010 Sum_probs=90.3
Q ss_pred HHHHHHHHHH-cCCCchhHH---HHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccch
Q 009099 362 VYYSTSVFRS-VGIESDVAA---SALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGT 437 (543)
Q Consensus 362 ~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (543)
++..+++.+. .+++..... +-...-..++.-+....+.|..+.|.+++++.+...+...++.+. .+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--------~sv~ 95 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--------TSVL 95 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--------CcHH
Confidence 3444555443 677666552 222233455566778889999999999998887777777776654 1223
Q ss_pred hHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc--cccchhhhhHHHHH
Q 009099 438 LAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG--ISTVYLGFATVCLL 515 (543)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g--~~~~~~~~~~~~~~ 515 (543)
...+.-++++...+. -...++|+=...|+++.-++.+......-+|.+++..++-.+....+ +.....+..+...+
T Consensus 96 ~mq~~q~~yg~~~a~--evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~ 173 (412)
T PF01770_consen 96 AMQLMQFFYGLATAA--EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSL 173 (412)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 334444444444432 23344455566688888899999999888888888777666665333 33343443333344
Q ss_pred HHHh
Q 009099 516 AVLY 519 (543)
Q Consensus 516 ~~~~ 519 (543)
+.++
T Consensus 174 a~~~ 177 (412)
T PF01770_consen 174 ALLI 177 (412)
T ss_pred HHHH
Confidence 4443
No 287
>PRK03612 spermidine synthase; Provisional
Probab=95.19 E-value=0.42 Score=48.62 Aligned_cols=48 Identities=25% Similarity=0.305 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHH-hhccccchhhhhHHHHHHHH
Q 009099 471 RAKAVALSLGMHWISNFVIGLYFLSVVN-KFGISTVYLGFATVCLLAVL 518 (543)
Q Consensus 471 ~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~~ 518 (543)
.+...|-.+....+|+++|+.+.+.+.- ..|......+.+.+.+++++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 5677888999999999999999888754 67766555555555544443
No 288
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.19 E-value=0.97 Score=46.45 Aligned_cols=161 Identities=16% Similarity=0.082 Sum_probs=96.7
Q ss_pred HHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhc-cCChhHHHHHHHHHHHHHHHHHHHHhhccccc-----
Q 009099 362 VYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDR-QGRKNLLTFSFTGMAASMLLLSLSFTWKVLAP----- 433 (543)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 433 (543)
.....++...++.....+ .............+++++++|- .||.+++.++.++..++++++..........+
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 333444444444444433 3333344455667889999996 68888888888888888777665543321110
Q ss_pred --c-------c-chhHHHHHHHHHHH-hhcCcccccccccccccC----hhhhh--HHHHHHHHHHHHHHHHHHHhhHHH
Q 009099 434 --Y-------S-GTLAVLGTVLYVLS-FSLGAGPVPALLLPEIFA----SRIRA--KAVALSLGMHWISNFVIGLYFLSV 496 (543)
Q Consensus 434 --~-------~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p----~~~~~--~~~g~~~~~~~~g~~~~~~~~g~~ 496 (543)
. . ....++...+.... ...+.-+....+-+|.++ .+.+. .-+...+...++|..++-.+..++
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 0 0 01112222222222 122334555556777776 22233 566677777888888888888888
Q ss_pred HHhhccccchhhhhHHHHHHHHhhhe
Q 009099 497 VNKFGISTVYLGFATVCLLAVLYIAV 522 (543)
Q Consensus 497 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 522 (543)
.+..||...|.+..++.+++.++.+.
T Consensus 218 q~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 218 QDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred hhcccceeeccHHHHHHHHHHHHHHc
Confidence 88899999999888888777665543
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.99 E-value=0.79 Score=33.22 Aligned_cols=66 Identities=17% Similarity=0.086 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHH
Q 009099 360 AVVYYSTSVFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLS 425 (543)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 425 (543)
.....+|.+.++.+++.... ......++.++|.+...++.++.++++.+..+.+...+..+.+.+.
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788888888877755 6677889999999999999999888888888888888888887764
No 290
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.74 E-value=0.16 Score=49.05 Aligned_cols=130 Identities=12% Similarity=-0.086 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccC
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 223 (543)
.|-..++.+...+.+....++.||+|-|+.+..+...+.++..+.+..++.+....-+-..|+-.+.....-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 45666777777799999999999999888888888888898888898888888888888888655555444444443321
Q ss_pred C---------------------c--ccchhhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHH
Q 009099 224 P---------------------T--EIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (543)
Q Consensus 224 ~---------------------~--~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 273 (543)
. . ..+|...|+.+....+-.++..+..|.+.+...+=+.+-...++++++
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 1 1 123566677777777776666665566555434445444454444443
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.30 E-value=0.32 Score=43.45 Aligned_cols=154 Identities=16% Similarity=0.117 Sum_probs=68.9
Q ss_pred HHHHcCCCchhH--HHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHH
Q 009099 368 VFRSVGIESDVA--ASALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKVLAPYSGTLAVLGTVL 445 (543)
Q Consensus 368 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (543)
+++.+++..... ++.......++...+.|-++||.|||+.-+.-.+...++++.= ..+. .-..+++-.+
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK-------hSpq--YkVLmVGR~L 133 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK-------HSPQ--YKVLMVGRVL 133 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh-------cCCc--eEEEeehhhh
Confidence 334455544433 2222223445556677889999999986543333333322211 1111 1122222222
Q ss_pred HHHHhhcCccccccccccccc-----ChhhhhHHHHHHH-HHHHHHHHHHHHhhHHHHHhhccc--cchhhhhHHHHHHH
Q 009099 446 YVLSFSLGAGPVPALLLPEIF-----ASRIRAKAVALSL-GMHWISNFVIGLYFLSVVNKFGIS--TVYLGFATVCLLAV 517 (543)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~~~~~~g~~--~~~~~~~~~~~~~~ 517 (543)
-+..-+..+...-..++.|.. |++-.....+=.. ....+-++++......+.|..+.. .+|-..+.+..++.
T Consensus 134 GGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm 213 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM 213 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH
Confidence 222222222222222555543 3333333333222 223345566666666777776644 45555444455554
Q ss_pred HhhheecccCCCC
Q 009099 518 LYIAVNVVETKGR 530 (543)
Q Consensus 518 ~~~~~~~~~~~~~ 530 (543)
.+.+.-..|..++
T Consensus 214 Avil~~W~ENygd 226 (454)
T KOG4332|consen 214 AVILSSWSENYGD 226 (454)
T ss_pred HHHHhhhhhccCC
Confidence 4444434444433
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.28 E-value=0.079 Score=50.07 Aligned_cols=107 Identities=21% Similarity=0.200 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhhHhhhhh-hcccchhhh--hhHHHHHHHHHHH----------HhhhHHHHHHHHHHHhhhccccc
Q 009099 146 IVSSLLAGATVGSFTGGSLADK-FGRTRTFQL--DAVPLAAGAFLCA----------TAQSVQTMIIGRVLAGIGIGISS 212 (543)
Q Consensus 146 ~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~--~~~~~~i~~~~~~----------~~~~~~~l~~~r~l~G~~~g~~~ 212 (543)
+..+|.++=.+|..+.++.-=+ -.+|++.+. .-+++.-..++|- +.+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556777777777766653211 134444432 1222222222331 23456777888999999999999
Q ss_pred cchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcc
Q 009099 213 AIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLP 252 (543)
Q Consensus 213 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 252 (543)
..++.+..+..++++|..+..+......+|..+|..++..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888888888888877766543
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.73 E-value=25 Score=35.61 Aligned_cols=112 Identities=13% Similarity=0.006 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhc--cccccc--------------c------hhHHHHHH
Q 009099 387 ANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWK--VLAPYS--------------G------TLAVLGTV 444 (543)
Q Consensus 387 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------------~------~~~~~~~~ 444 (543)
+.++...+-.++++++++.++.............++++..... ...++. . .|......
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 3445566788999999999887766666655555555442211 000000 0 00000111
Q ss_pred HHHHHhhcCc-ccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 445 LYVLSFSLGA-GPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 445 ~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
+..-.++... .-..+.+++|.++.++..+-.++.....++|.++++.+...+.+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111122112 22467789999999999999999999999999999998888776
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=89.17 E-value=19 Score=35.88 Aligned_cols=112 Identities=12% Similarity=-0.073 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHhhcc--ccc-----------cc-c---------hhHHHHH
Q 009099 387 ANVFGTAVASSLMDRQGRKNLLTFSFTGMAASMLLLSLSFTWKV--LAP-----------YS-G---------TLAVLGT 443 (543)
Q Consensus 387 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------~~-~---------~~~~~~~ 443 (543)
++++..++-.++.+++.+.++...........++++++...... .++ .. . .|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 45666778888999999988877766666666666655433110 000 00 0 0111111
Q ss_pred HHHHHHhhcC-cccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 009099 444 VLYVLSFSLG-AGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVN 498 (543)
Q Consensus 444 ~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 498 (543)
.+..=..+.. ..-+.+..++|....++..+-+++.+...+++..+++.+..++..
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1211112211 223455678899999999999999999999999999888887765
No 295
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=87.45 E-value=19 Score=31.59 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHhhHhhh---hhhcccchhhhhhHHHHHHH
Q 009099 145 WIVSSLLAGATVGSFTGGSLA---DKFGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 145 ~~~s~~~l~~~i~~~~~g~l~---dr~Grr~~~~~~~~~~~i~~ 185 (543)
+......+++.+|..+.+.+. ++..+|+.....+++-.+..
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll 93 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILL 93 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 334445555666666666662 33444444444444444333
No 296
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=87.28 E-value=6.2 Score=37.53 Aligned_cols=162 Identities=14% Similarity=0.008 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 189 (543)
+++.++.....-+..........+++-+. ....+.-.-+-.....+..++.|...|+..|+|++...+++--++..+++
T Consensus 33 y~gy~lt~wgdR~W~F~VsL~M~~L~gns-l~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vag 111 (503)
T KOG2601|consen 33 YLGYFLTTWGDRMWEFSVSLFMILLGGNS-LLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAG 111 (503)
T ss_pred hHHHHHhHhhHhHHHHHHHHHHHHHcCce-ehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHH
Confidence 44444444444444555555555554321 11112222222334456677888899999999988777665433332222
Q ss_pred ------Hh------hhHHHHHHHHHHHhhhccc--cccch--hhhhhccC----Ccccchh---hhHHHHHHHHHHHHHH
Q 009099 190 ------TA------QSVQTMIIGRVLAGIGIGI--SSAIV--PLYISEIS----PTEIRGA---LGSVNQLFICVGILAA 246 (543)
Q Consensus 190 ------~~------~~~~~l~~~r~l~G~~~g~--~~~~~--~~~i~~~~----~~~~r~~---~~~~~~~~~~~G~~~~ 246 (543)
+. .++..+..+-++.-.-.+. ....+ ..+-.||. ..+.+.. +.+.....-..-.++.
T Consensus 112 glvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~La 191 (503)
T KOG2601|consen 112 GLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLA 191 (503)
T ss_pred HHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchh
Confidence 22 2455554444333222111 11111 11223443 2233333 3344445555667888
Q ss_pred HHhhcccCCCCCchHHHHHHhHHHHHH
Q 009099 247 LVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (543)
Q Consensus 247 ~~~~~~l~~~~~~wr~~f~~~~~~~~~ 273 (543)
|++.|.+... .+-|..-.+.++.+++
T Consensus 192 pv~tg~Iitf-vsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 192 PVITGLIITF-VSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhccccee-echhhhhhhhHHHHHH
Confidence 8888887754 5556544444444444
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.20 E-value=1.4 Score=40.52 Aligned_cols=105 Identities=15% Similarity=0.069 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccc------hhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhh
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTR------TFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPL 217 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~------~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 217 (543)
-|....|-+|..+. +=+-|+=+-+ ++..-.+++.+...+..+.+++|..++.-+..|+-.|..++...-
T Consensus 291 RwyqvlYQlGVFiS-----RSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~ 365 (409)
T KOG3880|consen 291 RWYQVLYQLGVFIS-----RSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFH 365 (409)
T ss_pred hhhheeeeeeEEEE-----eccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHH
Confidence 68888887764332 2222222211 222333444555566778899999999999999998988888888
Q ss_pred hhhccCCcccchhhhHHHHHHHHHHHHHHHHhhccc
Q 009099 218 YISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (543)
Q Consensus 218 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l 253 (543)
-+.+-.++++|-.+|+...++-.+|..++.+++-.+
T Consensus 366 ~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 366 NIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 888888889999999999999999999988887665
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=86.89 E-value=0.87 Score=41.75 Aligned_cols=133 Identities=17% Similarity=0.063 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhhccC
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 223 (543)
|.+.-+-.+-..+..+....+.||+---.=..+..++.+.+.++.+++++.++-+.+-.+..++.|.....-.++-+.+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y- 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY- 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC-
Confidence 4455555556666777778888886432223444566677778889999999988888888888776655555443332
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHhhcccCC-CCCchHHHHHHhHHHHHHHHHHhccc
Q 009099 224 PTEIRGALGSVNQLFICVGILAALVAGLPLAG-NPLWWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 224 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~-~~~~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
++ ...+-+..+.+..+++|..--..+.+ ....-|.+.++...+-++.+...+++
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhe
Confidence 22 22333444444444444433333433 23556777777665555555554444
No 299
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=86.61 E-value=7.6 Score=37.16 Aligned_cols=47 Identities=13% Similarity=0.076 Sum_probs=24.2
Q ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhh-----ccCChhHHHH
Q 009099 364 YSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMD-----RQGRKNLLTF 410 (543)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~g~~~~~~~ 410 (543)
-.|.+++..+.+-......-+..--.--.++...+.| |+||||..++
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceee
Confidence 6777777555443322111111111222445566666 9999886554
No 300
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=83.20 E-value=48 Score=32.36 Aligned_cols=14 Identities=14% Similarity=0.323 Sum_probs=7.6
Q ss_pred ccccChhhhhHHHH
Q 009099 463 PEIFASRIRAKAVA 476 (543)
Q Consensus 463 ~~~~p~~~~~~~~g 476 (543)
...+|+++....++
T Consensus 142 a~~~P~~ytqavm~ 155 (406)
T KOG1479|consen 142 AGLFPSEYTQAVMS 155 (406)
T ss_pred hhcCCHHHHHHHHh
Confidence 34467776554443
No 301
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=82.30 E-value=3.8 Score=36.87 Aligned_cols=101 Identities=16% Similarity=0.063 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhh-cccchhh----hhhHHHHHHHHHHHH-h----hhHHHHHHHHHHHhhhcccccc
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQ----LDAVPLAAGAFLCAT-A----QSVQTMIIGRVLAGIGIGISSA 213 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~----~~~~~~~i~~~~~~~-~----~~~~~l~~~r~l~G~~~g~~~~ 213 (543)
....-++..|+.+|....|.++..- -||+.+. .+++++.+..++... . .++..+++.-|+.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 5556677788888888889988754 4555433 233444444433211 1 2466677778888887644444
Q ss_pred chhhhhhccCCcccchhhhHHHHHHHHHHHHH
Q 009099 214 IVPLYISEISPTEIRGALGSVNQLFICVGILA 245 (543)
Q Consensus 214 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 245 (543)
+... +.+-++...+-+..-.++..+++|.+.
T Consensus 224 ViL~-lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILN-LPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhc-ChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 4333 333333333334444455566666543
No 302
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=81.78 E-value=27 Score=33.03 Aligned_cols=94 Identities=21% Similarity=0.154 Sum_probs=60.9
Q ss_pred hHHHHHHHcC-CCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH-------HHHHHHHHH--hhhHH
Q 009099 126 ALEYLAKDLG-IAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL-------AAGAFLCAT--AQSVQ 195 (543)
Q Consensus 126 ~~~~i~~~~~-~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~-------~i~~~~~~~--~~~~~ 195 (543)
.+..++..++ -.--+. +.+.+.|...+.+|+...-++.|.--.-+.+..-+++. .+..+.+++ .++-+
T Consensus 29 al~tLatyLlG~~Ilq~--S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~ 106 (508)
T COG4262 29 ALGTLATYLLGGGILQT--SLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRL 106 (508)
T ss_pred HHHHHHHHhcCCceeeh--HHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHH
Confidence 5555666653 333444 99999999999999999888877543332222211111 111112221 25677
Q ss_pred HHHHHHHHHhhhccccccchhhhhhc
Q 009099 196 TMIIGRVLAGIGIGISSAIVPLYISE 221 (543)
Q Consensus 196 ~l~~~r~l~G~~~g~~~~~~~~~i~~ 221 (543)
.+++.-++.|.-.|...|..+.++..
T Consensus 107 Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 107 VLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 88888999999999999999888776
No 303
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=79.45 E-value=9.4 Score=36.05 Aligned_cols=121 Identities=16% Similarity=0.195 Sum_probs=86.2
Q ss_pred HHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccc--hhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhhcc
Q 009099 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTR--TFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIG 209 (543)
Q Consensus 132 ~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~--~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g 209 (543)
++..-.+.....|..-++..+..+++.+..|.+.-++.|.. .+.++.+.-+...++++..+++|..+++.++.+.-..
T Consensus 262 ~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~ 341 (433)
T KOG3810|consen 262 KEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQ 341 (433)
T ss_pred HhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHh
Confidence 33333334445588888888999999999999998887763 4444555555556677788999999999988888878
Q ss_pred ccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccCC
Q 009099 210 ISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (543)
Q Consensus 210 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 255 (543)
...+.+..-+++....+.-|..+|+.... +.++-.++.....+
T Consensus 342 l~itiA~~~iA~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 342 LTITIATFQIARNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred hhhhHHHHHHHHhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 88888888888888877778888877643 33444444444443
No 304
>COG3619 Predicted membrane protein [Function unknown]
Probab=77.20 E-value=52 Score=29.16 Aligned_cols=102 Identities=9% Similarity=0.060 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcc-cc
Q 009099 102 VLPFVGVACLGAILFGYHLGVVNGALE--------YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR-TR 172 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~ 172 (543)
..+.+.+...+.+.+.+.....+-... .+.-++. ..+...........+.+.++......+..|..| ..
T Consensus 10 l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~--~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~ 87 (226)
T COG3619 10 LRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELA--EGDAALAVLLLLPILAFVLGVAAAELISRRATRSFI 87 (226)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHh--cChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 344555666677788776633332222 2222222 223333667777777777776655555555554 12
Q ss_pred -h-hhhhhHHHHHHHHHHHHh----hhHHHHHHHHHHHh
Q 009099 173 -T-FQLDAVPLAAGAFLCATA----QSVQTMIIGRVLAG 205 (543)
Q Consensus 173 -~-~~~~~~~~~i~~~~~~~~----~~~~~l~~~r~l~G 205 (543)
. ...+.++..+.....++. ++....+..-+.+|
T Consensus 88 ~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg 126 (226)
T COG3619 88 PVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMG 126 (226)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 1 222333333333334432 35555555555555
No 305
>PRK10263 DNA translocase FtsK; Provisional
Probab=76.57 E-value=12 Score=41.89 Aligned_cols=19 Identities=21% Similarity=0.184 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHhhhccC
Q 009099 385 GAANVFGTAVASSLMDRQG 403 (543)
Q Consensus 385 ~~~~~~~~~~~g~l~d~~g 403 (543)
+.++.+|..+...+..-+|
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3455555555555555555
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.84 E-value=14 Score=27.84 Aligned_cols=40 Identities=23% Similarity=0.126 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhh-cccchhhhhhHHHHH
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAA 183 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i 183 (543)
+.-.+.=+++..+.....||+.||| |-++..++..++.+.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 4445555566666677889999997 556655554444443
No 307
>COG4769 Predicted membrane protein [Function unknown]
Probab=68.93 E-value=12 Score=30.56 Aligned_cols=52 Identities=13% Similarity=0.011 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHhhh
Q 009099 150 LLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIG 207 (543)
Q Consensus 150 ~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~ 207 (543)
+.+..++.+...-++..++|+|.+-.+|... .-++.+|..++++.+++.|-.
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcc
Confidence 3444556677788889999999987666544 346789999999999987643
No 308
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=67.77 E-value=94 Score=28.00 Aligned_cols=33 Identities=3% Similarity=-0.124 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 386 AANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 386 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
++..+..+-+-+++.|+..|++.+.+..+..+.
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 334444444556777888777776665554443
No 309
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=67.39 E-value=1.6 Score=38.90 Aligned_cols=62 Identities=13% Similarity=0.199 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhh---------hhhhcccchh
Q 009099 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSL---------ADKFGRTRTF 174 (543)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l---------~dr~Grr~~~ 174 (543)
.+.+.+....+..-..+-...++.|+++... ..+.-+--+.-++..++.|.. .||+|||+..
T Consensus 24 vGHmlNDitAScWFTYlllfltqiglsp~~~--AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQIGLSPSSR--AMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHhcCCcchh--HHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3444444444433333334456678887777 666666666667777777644 4699998754
No 310
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=67.26 E-value=26 Score=35.04 Aligned_cols=58 Identities=19% Similarity=0.105 Sum_probs=43.1
Q ss_pred HHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 197 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
+++..++.-+..-..+++..+.-++..+|.--|+.|.+.+...++|+-....+.-++.
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lV 465 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLV 465 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 3344577777777788888899999999998899999999998887554444433333
No 311
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=65.06 E-value=20 Score=29.30 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHH
Q 009099 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILA 245 (543)
Q Consensus 192 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 245 (543)
+++..++..-.+.|+|.- ...+.+++.-.++++.|..+|+-.+--+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 455556666666665532 346667777778887899999998888887654
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=64.40 E-value=1.4e+02 Score=28.65 Aligned_cols=23 Identities=13% Similarity=0.262 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHH
Q 009099 475 VALSLGMHWISNFVIGLYFLSVV 497 (543)
Q Consensus 475 ~g~~~~~~~~g~~~~~~~~g~~~ 497 (543)
.+.....-++|+..+......+.
T Consensus 141 ~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 141 GSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred hhhhhhhHhhhhhhHHHHHHHHH
Confidence 33444446777776666665543
No 313
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=64.12 E-value=1.3e+02 Score=28.34 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=10.4
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 009099 102 VLPFVGVACLGAILFGYHLG 121 (543)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~ 121 (543)
.+.+++.+++=.+.+++..+
T Consensus 173 ~~~l~~~~~~Hs~~eGl~ig 192 (317)
T PF02535_consen 173 ALILLIALSIHSFFEGLAIG 192 (317)
T ss_pred HHHHHHHHHhhcchhhhhhh
Confidence 44455555555566655443
No 314
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=63.81 E-value=24 Score=28.90 Aligned_cols=33 Identities=3% Similarity=-0.103 Sum_probs=24.3
Q ss_pred cccccccccccChhhhhHHHHHHHHHHHHHHHH
Q 009099 456 PVPALLLPEIFASRIRAKAVALSLGMHWISNFV 488 (543)
Q Consensus 456 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 488 (543)
.+.|-+++....++..|+..|+-.+-.|++.+.
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345556666677787899999998888877644
No 315
>PRK02237 hypothetical protein; Provisional
Probab=60.86 E-value=38 Score=25.68 Aligned_cols=48 Identities=17% Similarity=0.000 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA 191 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 191 (543)
|=+.++|.-.+.+.++++++..|+.-+-+.=.+|..+..++..++-+.
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 888899999999999999999999988777777777777776655444
No 316
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=57.71 E-value=1.5e+02 Score=30.50 Aligned_cols=26 Identities=23% Similarity=0.226 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCh
Q 009099 380 ASALVGAANVFGTAVASSLMDRQGRK 405 (543)
Q Consensus 380 ~~~~~~~~~~~~~~~~g~l~d~~g~~ 405 (543)
......+.+.+++..++++-..++.+
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 34445566677777777777766653
No 317
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=54.43 E-value=1.7e+02 Score=26.61 Aligned_cols=23 Identities=0% Similarity=-0.178 Sum_probs=12.4
Q ss_pred chHHHHHHhHHHHHHHHHHhccc
Q 009099 259 WWRTMFGLAAIPSILLALGMGLS 281 (543)
Q Consensus 259 ~wr~~f~~~~~~~~~~~~~~~~~ 281 (543)
...+.-++..++.++....+.++
T Consensus 113 ~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 113 SSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred chhHHHHHHHHHHHHHHHheeee
Confidence 34555555555555555555554
No 318
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.50 E-value=41 Score=25.42 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=29.7
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 009099 467 ASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFG 501 (543)
Q Consensus 467 p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g 501 (543)
.++.++.+.++-...-.+++++.....|++.|++-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34567888888888899999999999999999864
No 319
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=51.26 E-value=2.4e+02 Score=27.44 Aligned_cols=47 Identities=13% Similarity=0.091 Sum_probs=31.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHHH
Q 009099 469 RIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCLL 515 (543)
Q Consensus 469 ~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 515 (543)
.......+.....-..-..+.|.+.|.+....+.+.....+++..++
T Consensus 171 s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 171 SVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred HHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 33344445555566667889999999998887776665555555554
No 320
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=47.90 E-value=1.8e+02 Score=27.75 Aligned_cols=17 Identities=12% Similarity=0.268 Sum_probs=7.7
Q ss_pred HHHHHHHHHHhhhccCC
Q 009099 388 NVFGTAVASSLMDRQGR 404 (543)
Q Consensus 388 ~~~~~~~~g~l~d~~g~ 404 (543)
..+....-=++.++..+
T Consensus 180 ya~~nV~~E~~v~~~~~ 196 (334)
T PF06027_consen 180 YAVSNVLEEKLVKKAPR 196 (334)
T ss_pred HHHHHHHHHHhcccCCH
Confidence 33344444455555443
No 321
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=45.47 E-value=1.4e+02 Score=32.78 Aligned_cols=34 Identities=18% Similarity=0.045 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHcCCCcchh
Q 009099 108 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTV 141 (543)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~ 141 (543)
++++...+.......+.+.+..|.+.+++++..+
T Consensus 464 liy~Fv~LaIv~dDyFVPSLe~IAekLgLSE~VA 497 (1096)
T TIGR00927 464 MMYVFVALAIVCDEYFVPALGVITDKLQISEDVA 497 (1096)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhCCcHhhh
Confidence 3333344445555667788889999999987666
No 322
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=44.64 E-value=77 Score=27.09 Aligned_cols=26 Identities=27% Similarity=0.427 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhcccc
Q 009099 147 VSSLLAGATVGSFTGGSLADKFGRTR 172 (543)
Q Consensus 147 ~s~~~l~~~i~~~~~g~l~dr~Grr~ 172 (543)
+.-|.+++.++..+.|++.||..+|+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~~ 113 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKRN 113 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhccc
Confidence 44578889999999999999998633
No 323
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=42.67 E-value=40 Score=25.50 Aligned_cols=48 Identities=21% Similarity=0.075 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHh
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA 191 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 191 (543)
|=+.++|.-.+.+.++++++..|+.-+-+.=.+|..+..++..++.+.
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 888899999999999999999999988887778877777776655443
No 324
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=42.50 E-value=2.7e+02 Score=30.76 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=38.2
Q ss_pred hHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH
Q 009099 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 126 ~~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 188 (543)
....+...+|++.+.. |+.+ ..+|..+.-++....+-|-|.-.+.+...+..-+..++.
T Consensus 955 ~at~IG~vlGIse~Vm--GlTf--LA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIll 1013 (1096)
T TIGR00927 955 WAHQVGETIGISEEIM--GLTI--LAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITV 1013 (1096)
T ss_pred HHHHhhhhcCCChhhh--hhhh--hhhhcccHHHHHHHHHHHccCCcceeeeccccchheeee
Confidence 4556667788887665 5443 344777777778888778787666666655555555443
No 325
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=40.77 E-value=66 Score=26.41 Aligned_cols=38 Identities=24% Similarity=0.400 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHH
Q 009099 148 SSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 148 s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 185 (543)
.-|.+|+.+...+.|++.+|..+++......+...++.
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~ 97 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGL 97 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence 35788888999999999999988753333333333333
No 326
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=38.82 E-value=1.8e+02 Score=27.12 Aligned_cols=57 Identities=16% Similarity=0.034 Sum_probs=33.9
Q ss_pred HHHHHHHHhhhccccccchhhhhhccCCcccchhhhHHHHHHHHHHHHHHHHhhcccC
Q 009099 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (543)
Q Consensus 197 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~l~ 254 (543)
--..|.+.|+-. ..+.++++++.-.||++++--..--...+.+++..+-+++|-.+.
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888765 355778889999999654422222223333444555566665543
No 327
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=38.44 E-value=3.5e+02 Score=27.26 Aligned_cols=16 Identities=19% Similarity=-0.122 Sum_probs=12.1
Q ss_pred HHHhhhHHHHHHHHHH
Q 009099 188 CATAQSVQTMIIGRVL 203 (543)
Q Consensus 188 ~~~~~~~~~l~~~r~l 203 (543)
+-+.-+||.|++.|++
T Consensus 175 fl~~~syWLFY~vrIl 190 (505)
T PF06638_consen 175 FLFLFSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHHHHHhhheee
Confidence 3345689999999876
No 328
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=37.35 E-value=5.8e+02 Score=27.81 Aligned_cols=35 Identities=14% Similarity=0.035 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHH
Q 009099 236 QLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (543)
Q Consensus 236 ~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 271 (543)
..+..++.++..+++.++... .+|...+++.++++
T Consensus 107 ~~~M~lT~livAL~a~~Li~G-L~~~~ALLLGAILA 141 (810)
T TIGR00844 107 VPVMTSGWLVIALFVWILVPG-LNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHhhhc
Confidence 333445555555554444222 56776666665554
No 329
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=33.41 E-value=1.5e+02 Score=19.70 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhcccCCC
Q 009099 238 FICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPES 284 (543)
Q Consensus 238 ~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 284 (543)
+..+|.+++.+.+..... ..++.....+..+.+++..++...+|++
T Consensus 10 s~il~~vvgyI~ssL~~~-~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGV-TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHHhCC-CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344566666555544433 3667777666666666655555444443
No 330
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=33.39 E-value=1.4e+02 Score=19.41 Aligned_cols=38 Identities=29% Similarity=0.317 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhhHhhhhh-hcccchhhhhhHHHHHHH
Q 009099 148 SSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGA 185 (543)
Q Consensus 148 s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~ 185 (543)
...+....+.....|+..|+ ++.++...+..++.++..
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~ 45 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAA 45 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 34444555566677777775 577666555555544433
No 331
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=33.35 E-value=4.1e+02 Score=25.58 Aligned_cols=15 Identities=20% Similarity=0.135 Sum_probs=11.8
Q ss_pred HhhhHHHHHHHHHHH
Q 009099 190 TAQSVQTMIIGRVLA 204 (543)
Q Consensus 190 ~~~~~~~l~~~r~l~ 204 (543)
+.-.||.+++.|++.
T Consensus 201 ~~fayWLFYiVri~~ 215 (531)
T KOG3814|consen 201 IVFAYWLFYIVRILD 215 (531)
T ss_pred HHHHHHHHHhhhhhc
Confidence 345789999999876
No 332
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=32.55 E-value=1.5e+02 Score=24.33 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 009099 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (543)
Q Consensus 147 ~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 204 (543)
.-.+.++..+.+...-.+..|..||+.-.++.. ++-+.++|..|++++.++.
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giS------i~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGIS------IAGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 356677778888888888899988776655543 3446678888888887653
No 333
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=32.55 E-value=6e+02 Score=26.56 Aligned_cols=12 Identities=33% Similarity=0.611 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHH
Q 009099 410 FSFTGMAASMLL 421 (543)
Q Consensus 410 ~~~~~~~~~~~~ 421 (543)
.+.++.+.+..+
T Consensus 367 ~G~~ll~~~~~l 378 (571)
T PRK00293 367 FGFVLLALPVFL 378 (571)
T ss_pred HHHHHHHHHHHH
Confidence 344444444443
No 334
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=31.58 E-value=4.7e+02 Score=25.06 Aligned_cols=106 Identities=14% Similarity=0.074 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHH---HHHHHHHHHhhhHHHHHHHHHHHhhhccccccchhhhhh
Q 009099 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL---AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYIS 220 (543)
Q Consensus 144 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~---~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 220 (543)
|....+..+...+ .++.+++.+.+|.-+.+..+.++. +--.+...+++|......+-.+.|.-.|....-...+.-
T Consensus 50 GI~~laP~la~~l-~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaL 128 (354)
T PF04346_consen 50 GIMALAPVLAAFL-SPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVAL 128 (354)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhh
Confidence 4455555555444 567888899999999888877764 333456677777777777767777666655443333333
Q ss_pred ccCCcccc-hhhhHHHHHH--HHHHHHHHHHhh
Q 009099 221 EISPTEIR-GALGSVNQLF--ICVGILAALVAG 250 (543)
Q Consensus 221 ~~~~~~~r-~~~~~~~~~~--~~~G~~~~~~~~ 250 (543)
...++++| -.+.|+.... ..+|.+++.++.
T Consensus 129 gii~k~D~~y~a~Gil~GiitIPiG~~vggl~~ 161 (354)
T PF04346_consen 129 GIIEKEDHKYLAKGILAGIITIPIGCFVGGLIA 161 (354)
T ss_pred hhcChhhhHHHHHHHHHHHhhhCHHHHHHHHHH
Confidence 33344433 4555544332 234444444443
No 335
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=29.99 E-value=1.6e+02 Score=21.56 Aligned_cols=41 Identities=24% Similarity=0.163 Sum_probs=28.1
Q ss_pred HHHHHHhhHhhhhhhcc-------cchhhhhhHHHHHHHHHHHHhhhH
Q 009099 154 ATVGSFTGGSLADKFGR-------TRTFQLDAVPLAAGAFLCATAQSV 194 (543)
Q Consensus 154 ~~i~~~~~g~l~dr~Gr-------r~~~~~~~~~~~i~~~~~~~~~~~ 194 (543)
...+.+.++++.+|.-+ ++.+..+.++...+.+++++.+|.
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 33445666777776654 677777777777788887776654
No 336
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=29.75 E-value=4.5e+02 Score=24.21 Aligned_cols=166 Identities=12% Similarity=0.009 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhhhccC---ChhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 009099 358 INAVVYYSTSVFRSVGIESDVAASALVGAANVFGTAVASSLMDRQG---RKNLLTFSFTGMAASMLLLSLSFTWKVLAPY 434 (543)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (543)
..........++++..-...........+.-++|..+..+-.++-. .++-..-+.....++.+.+..+...+.....
T Consensus 83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~ 162 (269)
T PF06800_consen 83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAFHV 162 (269)
T ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Q ss_pred cchhHHHHHHHHHHHhhcCcccccccccccccChhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHhhccccchhhhhHHHH
Q 009099 435 SGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVNKFGISTVYLGFATVCL 514 (543)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 514 (543)
+.+-.++-..+-....+..+.... .-.-.-....++...|+...+.++...+.. +..|....|.+.=...+
T Consensus 163 ~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~k~~~~nil~G~~w~ignl~~~is~-------~~~G~a~af~lSQ~~vv 233 (269)
T PF06800_consen 163 SGWSAFLPQAIGMLIGAFIFNLFS--KKPFFEKKSWKNILTGLIWGIGNLFYLISA-------QKNGVATAFTLSQLGVV 233 (269)
T ss_pred ChhHhHHHHHHHHHHHHHHHhhcc--cccccccchHHhhHHHHHHHHHHHHHHHhH-------HhccchhhhhHHhHHHH
Q ss_pred HHHHhhheecccCCCCCH
Q 009099 515 LAVLYIAVNVVETKGRSL 532 (543)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~ 532 (543)
++.+.-.++++|+|.++.
T Consensus 234 IStlgGI~il~E~Kt~ke 251 (269)
T PF06800_consen 234 ISTLGGIFILKEKKTKKE 251 (269)
T ss_pred HHHhhhheEEEecCchhh
No 337
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=28.44 E-value=5.4e+02 Score=24.71 Aligned_cols=33 Identities=9% Similarity=-0.007 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhhhccCChhHHHHHHHHH
Q 009099 383 LVGAANVFGTAVASSLMDRQGRKNLLTFSFTGM 415 (543)
Q Consensus 383 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 415 (543)
.....-+...++.+.+.+++|-|+++.++....
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y 98 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPY 98 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334555566677779999999999887654443
No 338
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=28.27 E-value=2.5e+02 Score=27.84 Aligned_cols=48 Identities=17% Similarity=0.339 Sum_probs=27.4
Q ss_pred HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHH
Q 009099 129 YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (543)
Q Consensus 129 ~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 180 (543)
.+-+.+|+++... | .++...|..+=-++...+..|-|---+.+.+.+.
T Consensus 449 ~iGeT~gIp~eIM--G--LTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiG 496 (588)
T KOG1307|consen 449 IIGETLGIPDEIM--G--LTILAAGTSIPDLITSVIVARKGLGDMAVSSSIG 496 (588)
T ss_pred HcccccCCCHHHh--h--hhhhhcCCchHHhhHhhhhcccccccceeecccc
Confidence 3445566665444 3 3455556666667777777777665554444443
No 339
>PRK14231 camphor resistance protein CrcB; Provisional
Probab=28.01 E-value=3.1e+02 Score=21.86 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHhhccc
Q 009099 237 LFICVGILAALVAGLPL 253 (543)
Q Consensus 237 ~~~~~G~~~~~~~~~~l 253 (543)
.+..+|.+.=..+...+
T Consensus 8 lGG~~Ga~~Ry~l~~~~ 24 (129)
T PRK14231 8 VFGALGGMCRYAMNLWL 24 (129)
T ss_pred HhHHHHHHHHHHHHHHh
Confidence 34444444444444333
No 340
>COG1422 Predicted membrane protein [Function unknown]
Probab=28.00 E-value=4e+02 Score=23.08 Aligned_cols=27 Identities=11% Similarity=-0.025 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhcccCCCCCchHHHHHHhHHHHH
Q 009099 240 CVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (543)
Q Consensus 240 ~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 272 (543)
.+..+++|++.. .+..+..++.+++..
T Consensus 32 ~ln~~f~P~i~~------~~p~lvilV~avi~g 58 (201)
T COG1422 32 ALNVVFGPLLSP------LPPHLVILVAAVITG 58 (201)
T ss_pred HHHHHHhhhccc------cccHHHHHHHHHHHH
Confidence 344455555543 234444555554443
No 341
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=27.47 E-value=5.2e+02 Score=24.26 Aligned_cols=94 Identities=11% Similarity=-0.080 Sum_probs=58.4
Q ss_pred HHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHHH-H-hhhHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhh
Q 009099 155 TVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA-T-AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALG 232 (543)
Q Consensus 155 ~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~ 232 (543)
.+..-+++.++||-|.-.+-+=|+.+.+..+.... + ..+.|.=++.-.+.|. ......++++.....++--...
T Consensus 21 LllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl~~a~l~g~----l~~ll~a~~ti~l~~nqiisG~ 96 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGLLAAALVGA----LFGLLHAFLTIKLRANQIISGL 96 (304)
T ss_pred HHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHH----HHHHHHHHHHHhhccccchhHH
Confidence 34555788999999998887777777665543222 2 3455554444444444 4445566777777677666666
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 009099 233 SVNQLFICVGILAALVAGLP 252 (543)
Q Consensus 233 ~~~~~~~~~G~~~~~~~~~~ 252 (543)
++...+.++...++....+.
T Consensus 97 alnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 97 ALNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 66666666776666555443
No 342
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=26.29 E-value=4e+02 Score=22.46 Aligned_cols=44 Identities=18% Similarity=0.150 Sum_probs=25.6
Q ss_pred HhhhhHHHHHHHc-CCC----cchhhHHHHHHHHHHHHHHHHHhhHhhh
Q 009099 122 VVNGALEYLAKDL-GIA----ENTVLQGWIVSSLLAGATVGSFTGGSLA 165 (543)
Q Consensus 122 ~~~~~~~~i~~~~-~~s----~~~~~~g~~~s~~~l~~~i~~~~~g~l~ 165 (543)
.+-|-.|++..|+ |++ .......|......+..+..+.+.|..+
T Consensus 37 lF~PNApY~lTDliHL~~~~~~~~~~~~W~~~~~l~~~~~~gll~G~~S 85 (168)
T PF07099_consen 37 LFLPNAPYMLTDLIHLSFNGIYRQNPPIWFDFLLLLSFALFGLLLGFLS 85 (168)
T ss_pred HHcCCchHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778887775 454 2221225666666666666666666443
No 343
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=25.85 E-value=5.8e+02 Score=24.79 Aligned_cols=13 Identities=8% Similarity=0.064 Sum_probs=6.2
Q ss_pred hhhhhhccCCccc
Q 009099 215 VPLYISEISPTEI 227 (543)
Q Consensus 215 ~~~~i~~~~~~~~ 227 (543)
...++++.+..++
T Consensus 351 ~~~~~a~~~~~~~ 363 (385)
T PF03547_consen 351 NSFVIASLYGLDE 363 (385)
T ss_pred HHHHHHHHhCCCH
Confidence 3344555555443
No 344
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=25.42 E-value=1.3e+02 Score=28.91 Aligned_cols=14 Identities=7% Similarity=0.271 Sum_probs=10.1
Q ss_pred hhhhcccchhhhhh
Q 009099 165 ADKFGRTRTFQLDA 178 (543)
Q Consensus 165 ~dr~Grr~~~~~~~ 178 (543)
.||+.-.|++...+
T Consensus 208 ~e~ft~sKllav~~ 221 (416)
T KOG2765|consen 208 VERFTLSKLLAVFV 221 (416)
T ss_pred cchhhHHHHHHHHH
Confidence 89998888765443
No 345
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=25.15 E-value=3.5e+02 Score=22.81 Aligned_cols=25 Identities=16% Similarity=0.193 Sum_probs=11.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHH
Q 009099 372 VGIESDVAASALVGAANVFGTAVAS 396 (543)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~g 396 (543)
+|+++...+.+....++.+|-++++
T Consensus 72 ~GlDP~~~~g~~t~a~g~lG~L~GP 96 (173)
T PF08566_consen 72 MGLDPFMVYGLATLACGALGWLVGP 96 (173)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHhcc
Confidence 3666655443333333444443333
No 346
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=24.84 E-value=2.8e+02 Score=24.03 Aligned_cols=30 Identities=13% Similarity=-0.098 Sum_probs=22.6
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhcccCC
Q 009099 226 EIRGALGSVNQLFICVGILAALVAGLPLAG 255 (543)
Q Consensus 226 ~~r~~~~~~~~~~~~~G~~~~~~~~~~l~~ 255 (543)
++.+++.++...+..+|.++|.++..++..
T Consensus 137 ~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 137 RKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 334788888888888888888888777643
No 347
>COG2119 Predicted membrane protein [Function unknown]
Probab=24.79 E-value=4.4e+02 Score=22.53 Aligned_cols=37 Identities=8% Similarity=-0.079 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHH
Q 009099 382 ALVGAANVFGTAVASSLMDRQGRKNLLTFSFTGMAAS 418 (543)
Q Consensus 382 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 418 (543)
....++..++.+.+.++++|+..|.+...+.++..+.
T Consensus 141 lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~f 177 (190)
T COG2119 141 LGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIF 177 (190)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 3345677888889999999999998877665544433
No 348
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=24.72 E-value=2.7e+02 Score=25.81 Aligned_cols=35 Identities=14% Similarity=0.046 Sum_probs=19.8
Q ss_pred hhhhHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhcc
Q 009099 175 QLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIG 209 (543)
Q Consensus 175 ~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~g 209 (543)
+.+++++++++++..+. ++.|.+.+.-++.+++.+
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 44555555666555554 455555555566666654
No 349
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=24.67 E-value=1.3e+03 Score=27.76 Aligned_cols=18 Identities=6% Similarity=0.038 Sum_probs=10.6
Q ss_pred CchHHHHHHhHHHHHHHH
Q 009099 258 LWWRTMFGLAAIPSILLA 275 (543)
Q Consensus 258 ~~wr~~f~~~~~~~~~~~ 275 (543)
.+|+..+.+.+++.++.+
T Consensus 195 ~sw~Lalv~l~~~pl~~~ 212 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYI 212 (1466)
T ss_pred HhHHHHHHHHHHHHHHHH
Confidence 568887766555444333
No 350
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.30 E-value=1.3e+02 Score=26.66 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=49.7
Q ss_pred hHhhhhhhccc-----ch---hhhhhHHHHHH-HHHHHHhhhH--HHHHHHHHHHhhhccccccchhhhhhccCCcccch
Q 009099 161 GGSLADKFGRT-----RT---FQLDAVPLAAG-AFLCATAQSV--QTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRG 229 (543)
Q Consensus 161 ~g~l~dr~Grr-----~~---~~~~~~~~~i~-~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~ 229 (543)
.+.++||||-+ -+ +++|.++-++. +++.++..++ ..=...-.-.|+|.|.++.++..-+.+.+|. ...
T Consensus 127 laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P~-~a~ 205 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYPE-MAD 205 (241)
T ss_pred eeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCcc-hHH
Confidence 46788999853 33 34444333322 2222222211 1223344567888888888888888888874 355
Q ss_pred hhhHHHHHHHHHHHHHHHHhh
Q 009099 230 ALGSVNQLFICVGILAALVAG 250 (543)
Q Consensus 230 ~~~~~~~~~~~~G~~~~~~~~ 250 (543)
...++-.+...+..+.|-.+.
T Consensus 206 ~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 206 QILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 566665555555555554443
No 351
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.20 E-value=3.2e+02 Score=20.67 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=10.3
Q ss_pred HhhHhhhh-hhcccchhhhhhHHHH
Q 009099 159 FTGGSLAD-KFGRTRTFQLDAVPLA 182 (543)
Q Consensus 159 ~~~g~l~d-r~Grr~~~~~~~~~~~ 182 (543)
.+.|...| +||-++.+.+.+++.+
T Consensus 60 ~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 60 VAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 34444444 3454444443333333
No 352
>COG1288 Predicted membrane protein [Function unknown]
Probab=23.99 E-value=4e+02 Score=26.42 Aligned_cols=37 Identities=5% Similarity=-0.206 Sum_probs=21.4
Q ss_pred HHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHH
Q 009099 241 VGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (543)
Q Consensus 241 ~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 277 (543)
.+..++.-+++.-.....+||...|+...+..+..+.
T Consensus 199 F~~~IAq~iAGip~~sG~~~Riv~~v~~~~~~i~y~~ 235 (481)
T COG1288 199 FATVIAQNIAGIPFLSGMGLRIVVWVVFTLISIIYVY 235 (481)
T ss_pred hHHHHHhhhcCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 3344444444432223378999999887766555444
No 353
>COG2119 Predicted membrane protein [Function unknown]
Probab=23.87 E-value=4.6e+02 Score=22.43 Aligned_cols=59 Identities=15% Similarity=0.083 Sum_probs=38.0
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHH
Q 009099 127 LEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL 187 (543)
Q Consensus 127 ~~~i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 187 (543)
.-.+..+++...... .|.. ....++..++-+.+.++++|+..|++-.++.+++.+..+.
T Consensus 122 TIaLaA~~~~~~~V~-~Gt~-lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~ 180 (190)
T COG2119 122 TIALAADYHSPWAVF-AGTT-LGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALV 180 (190)
T ss_pred HHHHhhcCCCceeee-hhhH-HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 334556666533222 1322 2344566677788999999999999988888777665543
No 354
>PTZ00370 STEVOR; Provisional
Probab=23.01 E-value=82 Score=28.79 Aligned_cols=21 Identities=10% Similarity=-0.048 Sum_probs=8.9
Q ss_pred HhhheecccCCCCCHHHHHHh
Q 009099 518 LYIAVNVVETKGRSLEEIERA 538 (543)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~ 538 (543)
++..++++++|+.-..|-++.
T Consensus 273 ilYiwlyrrRK~swkhe~kkh 293 (296)
T PTZ00370 273 ILYIWLYRRRKNSWKHECKKH 293 (296)
T ss_pred HHHHHHHHhhcchhHHHHHhh
Confidence 333344444444434444443
No 355
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.88 E-value=41 Score=26.88 Aligned_cols=16 Identities=38% Similarity=0.289 Sum_probs=7.9
Q ss_pred HHHHHHhHHHHHHHHH
Q 009099 261 RTMFGLAAIPSILLAL 276 (543)
Q Consensus 261 r~~f~~~~~~~~~~~~ 276 (543)
||+++++.++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4566555554444333
No 356
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=22.02 E-value=1.6e+02 Score=24.77 Aligned_cols=34 Identities=18% Similarity=0.122 Sum_probs=19.0
Q ss_pred HHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhh
Q 009099 131 AKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSL 164 (543)
Q Consensus 131 ~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l 164 (543)
+.-+|+++-.....-..++-.+|+.+|..++..+
T Consensus 69 ~~I~GlDP~~~~g~~t~a~g~lG~L~GP~~G~~v 102 (173)
T PF08566_consen 69 QQIMGLDPFMVYGLATLACGALGWLVGPSLGNQV 102 (173)
T ss_pred ccccCcCHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 3445777655544555555666666655554443
No 357
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=21.11 E-value=2.4e+02 Score=25.00 Aligned_cols=71 Identities=20% Similarity=0.020 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHHhHHHHHHHHHHhccc--CCChhHHHhcCChHHHHHHHHHH
Q 009099 230 ALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS--PESPRWLFQQGKKSEAEKSIQTL 304 (543)
Q Consensus 230 ~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~ 304 (543)
....++..+..++.++..++.+++. ++.|.+.+.+++..+++.++.|- -|...+...++.+-.+...++.+
T Consensus 25 p~l~~~ml~a~l~~~~v~v~ig~l~----~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~l 97 (224)
T PF13829_consen 25 PKLPWLMLGAFLGPIAVFVLIGLLF----GSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNL 97 (224)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhh
Confidence 4455555555555554444444543 24455666666655444443332 22222333444444454455544
No 358
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=20.67 E-value=8.7e+02 Score=24.40 Aligned_cols=118 Identities=15% Similarity=0.207 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHhhhhHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHhhHhhhhhhcccchhhhhhHHHHHHHHHH
Q 009099 110 CLGAILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (543)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 188 (543)
.+-..+..+...+ ..|. +..++|++.++. ..+.+.-.+...++.++.-....+.|-|-....+.....++-+..
T Consensus 22 glQH~lamfg~~V---~VPlivg~a~~l~~~~~--~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~ 96 (451)
T COG2233 22 GLQHLLAMFGATV---LVPLLVGLALGLSAEDT--AYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIA 96 (451)
T ss_pred HHHHHHHHHhcch---HhhHHhccCCCCCHHHH--HHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHH
Confidence 4445555444444 3333 346789998888 999999999999998887775555776777677666666665554
Q ss_pred HHhh---hHHHHHHHHHHHhhhccccccchhhhhhccCCcccchhhh
Q 009099 189 ATAQ---SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALG 232 (543)
Q Consensus 189 ~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~ 232 (543)
.... .....+-+-+..|+..-...+.....+.+.+||---|...
T Consensus 97 ~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 97 IGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred HHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEe
Confidence 4432 3566666666666655433332222778888887665443
Done!