Query 009103
Match_columns 543
No_of_seqs 195 out of 1693
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 20:27:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009103.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009103hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1292 Xanthine/uracil transp 100.0 5.8E-90 1.3E-94 715.6 34.5 500 37-542 1-509 (510)
2 COG2233 UraA Xanthine/uracil p 100.0 2.6E-77 5.7E-82 629.7 36.0 410 36-501 4-436 (451)
3 PRK11412 putative uracil/xanth 100.0 1E-72 2.2E-77 602.1 43.0 402 48-501 8-430 (433)
4 TIGR03616 RutG pyrimidine util 100.0 1E-66 2.2E-71 558.6 42.5 403 34-501 16-428 (429)
5 PRK10720 uracil transporter; P 100.0 1.7E-66 3.8E-71 557.0 41.2 389 36-500 2-407 (428)
6 TIGR00801 ncs2 uracil-xanthine 100.0 2.5E-64 5.4E-69 539.4 40.8 392 44-497 1-415 (415)
7 TIGR03173 pbuX xanthine permea 100.0 7.3E-64 1.6E-68 535.1 40.4 388 54-499 1-406 (406)
8 PF00860 Xan_ur_permease: Perm 100.0 1.5E-60 3.3E-65 506.8 27.7 370 48-451 1-385 (389)
9 COG2252 Xanthine/uracil/vitami 100.0 3.7E-35 8E-40 308.1 30.5 384 33-499 4-412 (436)
10 TIGR00843 benE benzoate transp 99.9 2E-23 4.3E-28 219.1 31.6 315 49-421 22-349 (395)
11 COG0659 SUL1 Sulfate permease 99.9 2.1E-22 4.5E-27 221.9 34.8 317 47-424 21-370 (554)
12 PF03594 BenE: Benzoate membra 99.9 5.8E-20 1.3E-24 190.0 31.3 313 49-419 6-331 (378)
13 TIGR00815 sulP high affinity s 99.9 4.6E-19 1E-23 197.3 35.5 321 47-413 14-369 (563)
14 PRK11660 putative transporter; 99.9 5.9E-19 1.3E-23 196.6 35.3 318 46-413 28-389 (568)
15 COG3135 BenE Uncharacterized p 99.8 3.5E-18 7.5E-23 173.2 28.8 314 49-420 21-347 (402)
16 PF00916 Sulfate_transp: Sulfa 99.5 4.4E-14 9.5E-19 143.7 12.0 240 162-429 1-274 (280)
17 KOG0236 Sulfate/bicarbonate/ox 99.5 2.9E-12 6.3E-17 144.7 27.1 315 64-415 91-440 (665)
18 TIGR00834 ae anion exchange pr 98.5 0.00017 3.6E-09 83.6 32.9 313 87-428 403-799 (900)
19 KOG1172 Na+-independent Cl/HCO 98.5 0.00011 2.4E-09 83.4 29.5 344 56-427 364-774 (876)
20 PF11840 DUF3360: Protein of u 97.7 0.013 2.8E-07 61.2 22.6 341 34-430 52-418 (492)
21 PF00955 HCO3_cotransp: HCO3- 96.9 0.00093 2E-08 73.5 4.3 185 228-428 277-480 (510)
22 COG0659 SUL1 Sulfate permease 79.3 59 0.0013 36.8 15.7 120 299-430 25-155 (554)
23 TIGR00843 benE benzoate transp 79.3 42 0.0009 36.3 13.8 140 73-248 247-393 (395)
24 TIGR00815 sulP high affinity s 79.0 27 0.00058 39.5 13.0 117 299-426 18-150 (563)
25 PRK11660 putative transporter; 74.9 69 0.0015 36.3 14.8 115 299-425 33-155 (568)
26 PF13792 Sulfate_tra_GLY: Sulf 73.8 8.3 0.00018 32.3 5.4 59 46-117 15-75 (84)
27 PF03594 BenE: Benzoate membra 66.9 28 0.00061 37.2 8.8 115 293-411 2-127 (378)
28 PLN00028 nitrate transmembrane 55.6 3.1E+02 0.0066 29.9 15.5 38 73-110 63-104 (476)
29 COG1457 CodB Purine-cytosine p 50.3 3.9E+02 0.0084 29.5 26.1 63 310-376 242-307 (442)
30 PRK11412 putative uracil/xanth 47.8 3.3E+02 0.0072 29.8 13.4 77 86-184 276-352 (433)
31 TIGR03173 pbuX xanthine permea 47.6 3.9E+02 0.0084 28.7 15.8 76 86-183 254-329 (406)
32 TIGR00801 ncs2 uracil-xanthine 46.4 2.4E+02 0.0051 30.6 12.0 76 87-184 271-346 (415)
33 PF00860 Xan_ur_permease: Perm 43.8 3.5E+02 0.0075 28.9 12.7 96 71-189 254-350 (389)
34 COG4129 Predicted membrane pro 37.7 3.9E+02 0.0084 28.3 11.5 78 88-186 14-91 (332)
35 KOG4085 Uncharacterized conser 32.8 1.7E+02 0.0036 27.2 6.7 44 371-418 29-72 (175)
36 TIGR00834 ae anion exchange pr 29.7 9.5E+02 0.021 29.0 14.0 187 294-499 367-615 (900)
37 TIGR00822 EII-Sor PTS system, 27.6 3.1E+02 0.0067 28.1 8.5 39 392-431 164-202 (265)
38 KOG2675 Adenylate cyclase-asso 25.0 46 0.00099 36.1 2.0 16 4-19 231-246 (480)
39 KOG1924 RhoA GTPase effector D 23.7 72 0.0016 37.2 3.3 17 33-49 614-633 (1102)
40 PF05977 MFS_3: Transmembrane 23.5 1.1E+03 0.023 26.5 16.1 127 43-184 216-345 (524)
41 PRK11663 regulatory protein Uh 22.7 5.4E+02 0.012 27.3 10.0 39 65-104 43-81 (434)
42 PRK10720 uracil transporter; P 22.6 5.6E+02 0.012 27.9 10.0 47 377-423 92-141 (428)
43 KOG1292 Xanthine/uracil transp 22.0 4.5E+02 0.0097 29.3 8.8 146 84-252 304-464 (510)
44 PRK10739 putative antibiotic t 21.0 3.2E+02 0.0069 26.6 6.9 39 156-197 147-192 (197)
No 1
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=5.8e-90 Score=715.56 Aligned_cols=500 Identities=55% Similarity=1.001 Sum_probs=471.8
Q ss_pred cceecCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhh-HHHHHHHHHHHHHHHHHHHHhcCCcceEeccc
Q 009103 37 LQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDK-GRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPS 115 (543)
Q Consensus 37 ~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~-~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gps 115 (543)
+.|+++|.|||...+++|+||++.|++.++++|.+++.+++.+++|. +.+||+++|++||.|++|++||.|||+++|+|
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 36999999999999999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhcCCCCCCCcc----chhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHH
Q 009103 116 AAFTLPVLSIINDYNDGSFTSEH----DRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGL 191 (543)
Q Consensus 116 f~~i~~~~~i~~~~g~~~~~~~~----~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l 191 (543)
|+|+++..++.....+.+..+++ ++|...+++++||.++++++++++|++|+.+++.|++.|+.+.+.++++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 99999999998765566644433 37999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccccchhhhHHHHHHHHHHHHHH--hhhhcc--cchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCccccccc
Q 009103 192 FMRGFPLLGNCVEIGLPMLVLLVICQQY--LKRLHP--KAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSC 267 (543)
Q Consensus 192 ~~~~~~~~~~~~~i~l~~l~l~i~l~~~--~~~~~~--~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~ 267 (543)
+..+.+.++.||.+++..+++++++++| .++... .+++.++++++++++.+.|++|.++...+.|+.++..++.++
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~ 240 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC 240 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence 9999999999999999999999999999 433222 235678999999999999999999999999988777889999
Q ss_pred ccCccccCCCCCccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHH
Q 009103 268 RTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLV 347 (543)
Q Consensus 268 ~vd~~~~v~~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~il 347 (543)
|+|-+..++++||+.+|+|++||.|+||.+....++...++.++||+|++.+++|.+.++.++++.+|||+..||+++++
T Consensus 241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL 320 (510)
T KOG1292|consen 241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLL 320 (510)
T ss_pred cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHH
Confidence 99998878899999999999999999999999999999999999999999999999998888889999999999999999
Q ss_pred hhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhh
Q 009103 348 EGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQF 427 (543)
Q Consensus 348 sglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~ 427 (543)
+|+||+..++|.++||+|+++.||+.||++.+++|.++++++++.||++++++||.|++||++++.|+++...|+++++.
T Consensus 321 ~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf 400 (510)
T KOG1292|consen 321 AGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQF 400 (510)
T ss_pred HHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccchhhhhHHHhhhhhhHhhhhccccCCCCCccccCccccchhhHhccchhHHHHHHHHHHhhhcCCCCCcccc
Q 009103 428 ANNNSMRNIYILGLSLFLGISIPQYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVAMIVGTVLDNTLDARDTVADR 507 (543)
Q Consensus 428 ~~~~~~rn~~Ivg~sl~~Gl~~P~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g~l~aiiLn~~~~~~~~~~~~ 507 (543)
+|+|+.||.+|+|+|+++|+.+|++|+++ .+|++|..+|++++++.++++.+.+|+++|++||++.++. +||||
T Consensus 401 ~dlns~RNl~IlG~Sif~gLsip~yF~~~-----~~~v~Tg~~~~d~ilnvll~~~m~Vggi~A~~LDnt~~ga-tr~~R 474 (510)
T KOG1292|consen 401 VDLNSSRNLFILGFSIFLGLSIPQYFEQY-----PGPVHTGNGWFDDILNVLLSSRMLVGGILAFILDNTLPGA-TREQR 474 (510)
T ss_pred eccccccchhhhhHHHHHhccHHHHHHhC-----CCccccCcHHHHHHHHHHhhHHHHHHHHHhhhccccCCCC-ChHhc
Confidence 99999999999999999999999999985 4579999999999999999999999999999999999954 89999
Q ss_pred CCCcccccCCCCCCCCCCcccCCCccccccCCCCC
Q 009103 508 GLPWWKPFQHRKGDSRNDEFYSFPLRINEYIPTRF 542 (543)
Q Consensus 508 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (543)
|++||+++++.+.|.|+||+|+||+++||+||...
T Consensus 475 G~~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~~~ 509 (510)
T KOG1292|consen 475 GLRWWDKFETFNGDVRNEEFYSLPFNLNRFFPRIP 509 (510)
T ss_pred CCcchhccccccCCccccccccCcHHHHhhcccCC
Confidence 99999999999999999999999999999999753
No 2
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.6e-77 Score=629.74 Aligned_cols=410 Identities=30% Similarity=0.501 Sum_probs=381.0
Q ss_pred ccceecCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHH----hcCCcceE
Q 009103 36 QLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTL----FGTRLPTV 111 (543)
Q Consensus 36 ~~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~----~G~rlPiv 111 (543)
+.....|||+|+.|.+++|+||+++|+++++++|++++.+.+++++|+++++|+++++||++|++|.+ +|.|+|++
T Consensus 4 ~~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~ 83 (451)
T COG2233 4 LIYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSY 83 (451)
T ss_pred cccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCee
Confidence 34455778889999999999999999999999999999999999999999999999999999999997 56799999
Q ss_pred eccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHH-HHhhhcCccchHHHHHHHHHH
Q 009103 112 MGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWG-NLARFFSPIVIVPFVCVVGLG 190 (543)
Q Consensus 112 ~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~-~l~~~~Pp~V~G~~l~lIGl~ 190 (543)
+|+||+++.++.++.++++ ++.+.++|+++++|+++++++.. ++ |++|+|||+|+|.++++||++
T Consensus 84 lG~sFafi~p~i~~~~~~g------------~~~~~~~G~ii~ag~~~~li~~~--~~~~l~rlfPPvVtG~Vi~~IGls 149 (451)
T COG2233 84 LGSSFAFVAPMIAIGGTTG------------DGIAALLGGIIAAGLVYFLISPI--VKIRLARLFPPVVTGPVVLVIGLS 149 (451)
T ss_pred EechHHHHHHHHHHHhccC------------CchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCceEEeEeeeehhh
Confidence 9999999999988876543 45899999999999999999975 46 999999999999999999999
Q ss_pred HHHhhhcccc--------------chhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCC
Q 009103 191 LFMRGFPLLG--------------NCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAY 256 (543)
Q Consensus 191 l~~~~~~~~~--------------~~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~ 256 (543)
|++.+++++. .++.+++.+++.+++++++.|+ ++|+.++|+|+++||++++++|.
T Consensus 150 L~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~g-------~~~~i~ILiGlv~G~~la~~~G~---- 218 (451)
T COG2233 150 LAPVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIILLINRFGKG-------FLRRIPILIGLVVGYLLALFMGM---- 218 (451)
T ss_pred hHHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHHHHhCC----
Confidence 9999987653 1467888999988888888764 68899999999999999999983
Q ss_pred CCCCcccccccccCccccCCCCCccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCc
Q 009103 257 NNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSR 336 (543)
Q Consensus 257 ~~~~~~~~~~~~vd~~~~v~~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r 336 (543)
+|++. +.++||+++|.+++||+ +|||.++++++++++++++|++|++.|++++++++..++++++|
T Consensus 219 ------------vdf~~-v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~r 284 (451)
T COG2233 219 ------------VDFSG-VAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRR 284 (451)
T ss_pred ------------cCccc-cccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCccccc
Confidence 57776 88999999999999999 99999999999999999999999999999999987766799999
Q ss_pred chhhhchHHHHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHH
Q 009103 337 SIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGI 416 (543)
Q Consensus 337 ~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~ 416 (543)
++++||++++++|+||++|.|||+ ||+|+++.||++||++...++++++++|++||+++++++||.||+||+.+++||+
T Consensus 285 g~~aDGlat~iag~fg~~p~Ttfa-qNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~ 363 (451)
T COG2233 285 GLLADGLATLIAGLFGGFPNTTFA-QNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGM 363 (451)
T ss_pred ceeeccHHHHHHHhcCCCCCCchh-hceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhHhhccCCCcc-cchhhhhHHHhhhhh---hHhhhhccccCCCCCccccCccccchhhHhccchhHHHHHHHH
Q 009103 417 VAAVGITFIQFANNNSMR-NIYILGLSLFLGISI---PQYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVAMIVGT 492 (543)
Q Consensus 417 i~~~Gi~~l~~~~~~~~r-n~~Ivg~sl~~Gl~~---P~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g~l~ai 492 (543)
+..+|+|++.+.|+|++| |.+|+++++.+|++. |+++.+ +|++++.+++||+++|+++|+
T Consensus 364 Ia~sGir~l~~~~~~~~~~Nl~IvAvsl~~Gig~~~~p~~~~~----------------~p~~~~~l~~sGia~g~i~AI 427 (451)
T COG2233 364 IAASGIRILIRNKVDRSRRNLLIVAVSLGLGIGVGAVPEVFLQ----------------LPAWLRPLLSSGIALGTLTAI 427 (451)
T ss_pred HHHHHHHHHHhcccccCccceeeehHHHHhCcchhcCchhhhh----------------CcHHHHHHHhccHHHHHHHHH
Confidence 999999999999999756 999999999999994 888887 799999999999999999999
Q ss_pred HHhhhcCCC
Q 009103 493 VLDNTLDAR 501 (543)
Q Consensus 493 iLn~~~~~~ 501 (543)
+||+++|++
T Consensus 428 vLNlll~~~ 436 (451)
T COG2233 428 VLNLLLPGE 436 (451)
T ss_pred HHHHhcccc
Confidence 999999964
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=1e-72 Score=602.08 Aligned_cols=402 Identities=21% Similarity=0.322 Sum_probs=353.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHh
Q 009103 48 PQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIIN 127 (543)
Q Consensus 48 ~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~ 127 (543)
++++++|+||+++|+++++++|+++++++|+|++|+.+++|++++++||+|++|+.+|+|||++||+||+++++++++..
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~ 87 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITL 87 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999988863
Q ss_pred hcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhccccc------
Q 009103 128 DYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGN------ 201 (543)
Q Consensus 128 ~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~~------ 201 (543)
.....+ . .+...++..+|+++++|++++++|++++++|++|+|||+|+|+++++||++|++.+++++.+
T Consensus 88 ~~~~~g--~---~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~ 162 (433)
T PRK11412 88 GEASRG--T---PINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIA 162 (433)
T ss_pred cccccC--c---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCc
Confidence 211000 0 00112334455799999999999999999999999999999999999999999998875421
Q ss_pred ---------hhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHH-HHHhhcCCCCCCcccccccccCc
Q 009103 202 ---------CVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAA-ILTAAGAYNNVPEQTKLSCRTDR 271 (543)
Q Consensus 202 ---------~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~-~lg~~~~~~~~~~~~~~~~~vd~ 271 (543)
++.+++.++++++.++++.| +++|++++|+|+++||+++. .++. |+
T Consensus 163 ~~~~~~~~~~~~~a~~~l~~il~~~~~~~-------g~~~~~svLiGiv~G~v~a~~~~g~-----------------d~ 218 (433)
T PRK11412 163 DPNGKIQLPPFGLSVAVMCLVLAMIIFLP-------QRIARYSLLVGTIVGWILWAFCFPS-----------------SH 218 (433)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHHHhCC-----------------Cc
Confidence 23466666666666666654 56899999999999999865 4431 44
Q ss_pred cccCCCCCccccCccccccccc-cchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhh
Q 009103 272 SYLLSSAPWIKVPYPFQWGTPI-FRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGI 350 (543)
Q Consensus 272 ~~~v~~a~~~~~P~~~~fg~P~-f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsgl 350 (543)
+. +.+++|. +++||.|. ||+.+++++++++++.+.|++||+.|+++..+++.+++++++|++.+||++|+++|+
T Consensus 219 ~~-v~~a~w~----~~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~lagl 293 (433)
T PRK11412 219 SL-SGELHWQ----WFPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVP 293 (433)
T ss_pred ch-hccCCce----eecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHh
Confidence 43 5678884 34589995 999999999999999999999999999999887655578999999999999999999
Q ss_pred cCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhhccC
Q 009103 351 FGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQFANN 430 (543)
Q Consensus 351 fG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~~~~ 430 (543)
||+.|+|+|+ ||+|+++.||++||+++.++|+++++++|+||+++++++||.||+||+++++|+++..+|+|+++++|+
T Consensus 294 fg~~p~tt~s-qNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~~~~~ 372 (433)
T PRK11412 294 LAVIPFSPFV-SSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQQITF 372 (433)
T ss_pred cCCCCCCchh-hhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhhhHHHhhhhh---h-HhhhhccccCCCCCccccCccccchhhHhccchhHHHHHHHHHHhhhcCCC
Q 009103 431 NSMRNIYILGLSLFLGISI---P-QYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVAMIVGTVLDNTLDAR 501 (543)
Q Consensus 431 ~~~rn~~Ivg~sl~~Gl~~---P-~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g~l~aiiLn~~~~~~ 501 (543)
| +||.+|+|+++.+|++. | +++++ +|++++.+++||+++|+++|++||+++|+|
T Consensus 373 ~-~rn~~ivg~sl~~Glg~~~~p~~~~~~----------------~P~~~~~~l~sgi~~g~l~AilLn~~~~~~ 430 (433)
T PRK11412 373 T-ARNIYRLALPLFVGIFLMALPPVYLQD----------------LPLTLRPLLSNGLLVGILLAVLMENLIPWE 430 (433)
T ss_pred C-cccchhhHHHHHHHhhHHhCCHHHHHH----------------ChHHHHHHHcCcHHHHHHHHHHHHhhcCcc
Confidence 8 69999999999999996 6 58777 799999999999999999999999999963
No 4
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=1e-66 Score=558.62 Aligned_cols=403 Identities=23% Similarity=0.366 Sum_probs=348.9
Q ss_pred ccccceecCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHH-HhcCCcceEe
Q 009103 34 LQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQT-LFGTRLPTVM 112 (543)
Q Consensus 34 ~~~~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~-~~G~rlPiv~ 112 (543)
.++..|++|||||+++++++|+||+++|+++++++|+++ |+|++ ++++++|++|++|+ .+|+|+|+++
T Consensus 16 ~~~~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plil----gl~~~-------~tl~~sGi~TllQ~~~~G~rlP~v~ 84 (429)
T TIGR03616 16 LEHHPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLM----GFDPN-------LTILMSGIGTLLFFLITGGRVPSYL 84 (429)
T ss_pred CcCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCHh-------HHHHHHHHHHHHHHHHhCCCceeEE
Confidence 455789999999999999999999999999999999996 67864 67999999999997 4799999999
Q ss_pred ccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhH---HHHhhhcCccchHHHHHHHHH
Q 009103 113 GPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAW---GNLARFFSPIVIVPFVCVVGL 189 (543)
Q Consensus 113 Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~---~~l~~~~Pp~V~G~~l~lIGl 189 (543)
|+||+|++++..+... .. .+. .+++++++|+++++|++++++++++++ +|++|+|||+|+|.++++||+
T Consensus 85 G~sf~f~~~~~~~~~~-~~--~~~-----~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGl 156 (429)
T TIGR03616 85 GSSAAFVGAVIAATGY-NG--QGT-----NPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGL 156 (429)
T ss_pred cCcHHHHHHHHHHHhh-cc--cCC-----cchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHH
Confidence 9999999988765321 10 000 146899999999999999999998655 899999999999999999999
Q ss_pred HHHHhhhccccc----hhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCccccc
Q 009103 190 GLFMRGFPLLGN----CVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKL 265 (543)
Q Consensus 190 ~l~~~~~~~~~~----~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~ 265 (543)
++++.++++.+. +| .++.+++.++++.++.|+ ++|++++|+|+++||++|+.++.. +. .
T Consensus 157 sL~~vg~~~~~~~~~~~~-~al~tl~~i~l~~l~~~~-------~l~~~avLiGivvG~iva~~l~~~--~g-------~ 219 (429)
T TIGR03616 157 NLAPIAVKSVSASGFDSW-MAVLTILCIGAVAVFTRG-------MLQRLLILVGLIAAYLAYFILTNV--FG-------L 219 (429)
T ss_pred HHHHHHHHhccccccccH-HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhh--cC-------C
Confidence 999999886542 33 466776666666666654 588999999999999999886421 10 0
Q ss_pred ccccCccccCCCCCccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHH
Q 009103 266 SCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGM 345 (543)
Q Consensus 266 ~~~vd~~~~v~~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ 345 (543)
.+++|++. +.+++|+++| +|+.|+||+++++.+++.+++.++|++|++.++++..+++. +++++|++.+||++|
T Consensus 220 ~~~vd~s~-v~~a~~~~lP---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~~--~~~i~r~l~adGl~t 293 (429)
T TIGR03616 220 GKAVDFSP-ISQAAWFGLP---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTGRNL--DPYMGRAFVGDGLAT 293 (429)
T ss_pred CccccCcc-cccCccccCC---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCC--CchhccchhhhhHHH
Confidence 12467764 6789999999 57788999999999999999999999999999999987543 346999999999999
Q ss_pred HHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhH
Q 009103 346 LVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFI 425 (543)
Q Consensus 346 ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l 425 (543)
+++|++|+.|.|+|+ ||+|+++.||++||+++..+++++++++++||++++++.||.||+||+++++|+++..+|+|++
T Consensus 294 ~~agl~g~~p~tt~~-en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~l 372 (429)
T TIGR03616 294 MLSGSVGGTGVTTYA-ENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARIW 372 (429)
T ss_pred HHHHhcCCCCCccee-eeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred --hhccCCCcccchhhhhHHHhhhhhhHhhhhccccCCCCCccccCccccchhhHhccchhHHHHHHHHHHhhhcCCC
Q 009103 426 --QFANNNSMRNIYILGLSLFLGISIPQYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVAMIVGTVLDNTLDAR 501 (543)
Q Consensus 426 --~~~~~~~~rn~~Ivg~sl~~Gl~~P~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g~l~aiiLn~~~~~~ 501 (543)
++.|+|++||.+|+|+|+.+|++.- +..++.++.||+++|+++|++||+++|++
T Consensus 373 ~~~~~d~~~~rn~~ivg~sl~~g~g~~----------------------~~~~~~~~~s~i~~~~~~ai~Ln~~l~~~ 428 (429)
T TIGR03616 373 VQNKVDLTQNGNLIMVAVTLVLGAGDF----------------------ALTIGAFTLGGIGTATFGAIVLNALLNRD 428 (429)
T ss_pred HhccCCcCccceeehhHHHHHHHhHHH----------------------HHHHHHHhhCcHHHHHHHHHHHHHhcCCC
Confidence 6788987889999999999999751 23467889999999999999999999953
No 5
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=1.7e-66 Score=556.96 Aligned_cols=389 Identities=25% Similarity=0.405 Sum_probs=344.8
Q ss_pred ccceecCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhc-CCcceEecc
Q 009103 36 QLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFG-TRLPTVMGP 114 (543)
Q Consensus 36 ~~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G-~rlPiv~Gp 114 (543)
+..|++|||||+++++++|+||+++|+++++++|+++ |+|++ .++++||++|++|++.+ .|+|+++|+
T Consensus 2 ~~~~~~~~~~p~~~~~~lglQhvl~m~~~~i~~Pli~----gl~~~-------~~l~~sGi~TliQ~~~~g~rlP~~~G~ 70 (428)
T PRK10720 2 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILF----HINPA-------TVLLFNGIGTLLYLFICKGKIPAYLGS 70 (428)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCHH-------HHHHHHHHHHHHHHHhccCccceEEeC
Confidence 5679999999999999999999999999999999986 78874 37899999999999864 699999999
Q ss_pred chhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhh--hh-HHHHhhhcCccchHHHHHHHHHHH
Q 009103 115 SAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYS--GA-WGNLARFFSPIVIVPFVCVVGLGL 191 (543)
Q Consensus 115 sf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~--gl-~~~l~~~~Pp~V~G~~l~lIGl~l 191 (543)
||+|++++..+.. ++|++++|+++++|+++++++++ |+ ++|++|+|||.|+|.++++||+++
T Consensus 71 sfa~i~~~~~~~~---------------~~~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L 135 (428)
T PRK10720 71 SFAFISPVLLLLP---------------LGYEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLEL 135 (428)
T ss_pred cHHHHHHHHHHHH---------------ccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHh
Confidence 9999998877642 36999999999999999999997 22 679999999999999999999999
Q ss_pred HHhhhcccc-----------chhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 009103 192 FMRGFPLLG-----------NCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVP 260 (543)
Q Consensus 192 ~~~~~~~~~-----------~~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~ 260 (543)
.+.++++.+ .++.+++.+++++++++++.|+ ++|++++++|+++||++++.+|.
T Consensus 136 ~~~~~~~~g~~~~~~~~~~~~~~~lalv~l~iil~~~~~~kg-------~~~~~~iLigIvvG~ila~~lG~-------- 200 (428)
T PRK10720 136 AGVAAGMAGLLPAEGQTPDSKTIIISMVTLAVTVLGSVLFRG-------FLAIIPILIGVLVGYALSFAMGM-------- 200 (428)
T ss_pred HHHHHhhccccCCCCcccchHHHHHHHHHHHHHHHHHHHhcc-------HHHHhHHHHHHHHHHHHHHHhcC--------
Confidence 999876532 1466788887777666656544 57899999999999999998874
Q ss_pred cccccccccCccccCCCCCccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhh
Q 009103 261 EQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGL 340 (543)
Q Consensus 261 ~~~~~~~~vd~~~~v~~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~ 340 (543)
+|++. +.+++|+++|. |+.|+||+..++.+++.+++.++|++|++.++++..+++..+++++||++.+
T Consensus 201 --------~d~~~-v~~a~~~~lP~---~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~a 268 (428)
T PRK10720 201 --------VDTTP-IIEAHWFALPT---FYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFA 268 (428)
T ss_pred --------CCHHH-hhcCccccCCC---CCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhh
Confidence 34442 66788999994 5678999999999999999999999999999999887654456789999999
Q ss_pred hchHHHHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 009103 341 QGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAV 420 (543)
Q Consensus 341 dGl~~ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~ 420 (543)
||++|+++|+||++|+|+|+ ||+|+++.||++||+++.++++++++++|+||++++++.||.||+||+.+++|+++..+
T Consensus 269 dGlatii~glfG~~p~tty~-en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~ 347 (428)
T PRK10720 269 NGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGAS 347 (428)
T ss_pred hhHHHHHHHhcCCCCccccc-cccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhH--hhccCCCcccchhhhhHHHhhhhhhHhhhhccccCCCCCccccCccccchhhHhccchhHHHHHHHHHHhhhc
Q 009103 421 GITFI--QFANNNSMRNIYILGLSLFLGISIPQYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVAMIVGTVLDNTL 498 (543)
Q Consensus 421 Gi~~l--~~~~~~~~rn~~Ivg~sl~~Gl~~P~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g~l~aiiLn~~~ 498 (543)
|+|.+ ++.|++++||.+|+|+++.+|++... .+ ++.++.+|+..|+++|++||+++
T Consensus 348 Gi~~l~~~~~~~~~~~n~~i~~~~l~~g~~~~~--------------------~~--~~~~~~~gi~~g~~~ai~Lnlll 405 (428)
T PRK10720 348 GIRVLIESKVDYNKAQNLILTSVILIIGVSGAK--------------------VN--IGAAELKGMALATIVGIGLSLIF 405 (428)
T ss_pred HHHHHHHccCCCCcccchhHHHHHHHHHHHHHH--------------------HH--HHHHhcCcHHHHHHHHHHHHHHh
Confidence 99999 78899888899999999999998532 11 56788899999999999999999
Q ss_pred CC
Q 009103 499 DA 500 (543)
Q Consensus 499 ~~ 500 (543)
+.
T Consensus 406 ~~ 407 (428)
T PRK10720 406 KL 407 (428)
T ss_pred cc
Confidence 95
No 6
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=2.5e-64 Score=539.39 Aligned_cols=392 Identities=29% Similarity=0.485 Sum_probs=353.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCC---cceEeccchhhHH
Q 009103 44 NPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTR---LPTVMGPSAAFTL 120 (543)
Q Consensus 44 ~pp~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~r---lPiv~Gpsf~~i~ 120 (543)
|||+++++++|+||+++|+++++++|++++.+. +|++|+++++|++++++|++|++|+++.++ +|.++|++|++++
T Consensus 1 ~~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~ 79 (415)
T TIGR00801 1 RPPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVS 79 (415)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHH
Confidence 689999999999999999999999999999999 999999999999999999999999986433 6999999999999
Q ss_pred HHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhh--h-hHHHHhhhcCccchHHHHHHHHHHHHHhhhc
Q 009103 121 PVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYS--G-AWGNLARFFSPIVIVPFVCVVGLGLFMRGFP 197 (543)
Q Consensus 121 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~--g-l~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~ 197 (543)
+...+..+ ++|++++|+++++|+++++++++ + .++|++|+|||.|+|.++++||+++++.+++
T Consensus 80 ~~~~~~~~--------------~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~ 145 (415)
T TIGR00801 80 PMIAIGSG--------------LGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVK 145 (415)
T ss_pred HHHHHHhc--------------cCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHH
Confidence 87665432 56999999999999999999985 3 4679999999999999999999999999887
Q ss_pred ccc--------------chhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCccc
Q 009103 198 LLG--------------NCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQT 263 (543)
Q Consensus 198 ~~~--------------~~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~ 263 (543)
+++ .++.+++.++++++++.++.|+ ++|++++++++++||++++.+|.
T Consensus 146 ~~~g~~~~~~~~~~~~~~~~~vg~~~l~~~vl~~~~~~g-------~~~~~aiLigiv~g~i~a~~lg~----------- 207 (415)
T TIGR00801 146 MAAGGEAAMSSATYGSLENLGVAFVVLALIILLNRFGKG-------FLKSISILIGILVGYILALFMGI----------- 207 (415)
T ss_pred HhccCCCcccccccCchhhHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHHHcCC-----------
Confidence 642 1256777887777777666654 57899999999999999998874
Q ss_pred ccccccCccccCCCCCccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhch
Q 009103 264 KLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGI 343 (543)
Q Consensus 264 ~~~~~vd~~~~v~~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl 343 (543)
+|+++ +.++||+++|.+++|| |+||+..+..++++++++++|++|+++++++.+++++++++++||++.+||+
T Consensus 208 -----~~~~~-v~~~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl 280 (415)
T TIGR00801 208 -----VDFSP-VIDAPWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGL 280 (415)
T ss_pred -----ccchh-hccCcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhH
Confidence 34443 5678999999888888 7999999999999999999999999999999998765446889999999999
Q ss_pred HHHHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhH
Q 009103 344 GMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGIT 423 (543)
Q Consensus 344 ~~ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~ 423 (543)
+|+++|+||++|.++|+ ||+|+++.||++||++..++++++++++++||++++++.||.||+||+++++|+++..+|+|
T Consensus 281 ~~i~aglfG~~p~t~~s-en~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~ 359 (415)
T TIGR00801 281 ATLLAGLFGGFPNTTFA-QNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGIR 359 (415)
T ss_pred HHHHHHhcCCCCCcchh-hhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhccCCCcccchhhhhHHHhhhhh---hHhhhhccccCCCCCccccCccccchhhHhccchhHHHHHHHHHHhhh
Q 009103 424 FIQFANNNSMRNIYILGLSLFLGISI---PQYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVAMIVGTVLDNT 497 (543)
Q Consensus 424 ~l~~~~~~~~rn~~Ivg~sl~~Gl~~---P~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g~l~aiiLn~~ 497 (543)
.+++.|+|++||.+|+|+|+.+|+++ |+++++ +| +++||+++|+++|++||++
T Consensus 360 ~l~~~~~~~~r~~~i~~~s~~~g~~~~~~p~~~~~----------------~p-----~~~~g~~~g~~~ai~Ln~~ 415 (415)
T TIGR00801 360 ILIRNKLDNRRNRNIIAASVGLGLGVTGVPDIFGN----------------FP-----LLLSGIALAGIVAILLNLI 415 (415)
T ss_pred HHHhCccCcccceehHHHHHHHHHHHhccHHHHhh----------------Cc-----hhcccHHHHHHHHHHHhcC
Confidence 99999998789999999999999997 888765 56 7899999999999999974
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=7.3e-64 Score=535.06 Aligned_cols=388 Identities=30% Similarity=0.494 Sum_probs=350.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHH----HhcCCcceEeccchhhHHHHHHHHhhc
Q 009103 54 AFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQT----LFGTRLPTVMGPSAAFTLPVLSIINDY 129 (543)
Q Consensus 54 GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~----~~G~rlPiv~Gpsf~~i~~~~~i~~~~ 129 (543)
|+||+++|+++++++|++++++.|+|++|+..+++++++++|++|++|+ .+|+|+|+++|||+++++++..+..+
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~- 79 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAG- 79 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhh-
Confidence 6899999999999999999999999999999999999999999999997 46899999999999999877665422
Q ss_pred CCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhcccc---------
Q 009103 130 NDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLG--------- 200 (543)
Q Consensus 130 g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~--------- 200 (543)
++|++++|+++++|+++++++ ++++|++|+|||.|+|.++++||+++.+.++++..
T Consensus 80 -------------~~~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~ 144 (406)
T TIGR03173 80 -------------GGLGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFG 144 (406)
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCccccc
Confidence 579999999999999999999 47899999999999999999999999998876542
Q ss_pred --chhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCccccCCCC
Q 009103 201 --NCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSA 278 (543)
Q Consensus 201 --~~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd~~~~v~~a 278 (543)
+++.+++.++++++++.++.| +++|++++|+++++||++++.+|. +|++. +.++
T Consensus 145 ~~~~~~l~l~~l~~~il~~~~~~-------~~~~~~aiLi~ivvg~iva~~~g~----------------~~~~~-i~~~ 200 (406)
T TIGR03173 145 SPQNLGLALLTLVIILLLNRFGK-------GFLRSIAVLLGLVVGTIVAAALGM----------------VDFSG-VAEA 200 (406)
T ss_pred chHHHHHHHHHHHHHHHHHHHhh-------hHHHHhHHHHHHHHHHHHHHHhcC----------------CCchh-hccC
Confidence 235677777776666555444 457899999999999999998874 24432 5667
Q ss_pred CccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccc
Q 009103 279 PWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTT 358 (543)
Q Consensus 279 ~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt 358 (543)
+|+++|.+++|++|+||+..+..++.+++++++|++|+++++++..+++. +++++||++.+||++|+++|+||++|.|+
T Consensus 201 ~~~~~P~~~~~~~P~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~-~~~~~~~~l~~~Gi~~i~aglfG~~p~t~ 279 (406)
T TIGR03173 201 PWFALPTPFHFGAPTFDLVAILTMIIVYLVSMVETTGDFLALGEITGRPI-TEKDLAGGLRADGLGSALGGLFNTFPYTS 279 (406)
T ss_pred CeeeCCCCCcCCCCeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CchhccchHHhccHHHHHHHHhCCCCCcc
Confidence 89999988889999999999999999999999999999999999987543 46789999999999999999999999999
Q ss_pred cccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhhccCCCcccchh
Q 009103 359 ASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQFANNNSMRNIYI 438 (543)
Q Consensus 359 ~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~~~~~~~rn~~I 438 (543)
|+ ||+|+++.||++||++..++++++++++++||++++++.||.||+||+++++|+++..+|+|.+++.|+||+||.+|
T Consensus 280 ~~-~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~~rn~~i 358 (406)
T TIGR03173 280 FS-QNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDRRRNLLI 358 (406)
T ss_pred hh-hhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccCcceehh
Confidence 98 99999999999999999999999999999999999999999999999999999999999999999999998779999
Q ss_pred hhhHHHhhhhh---hHhhhhccccCCCCCccccCccccchhhHhccchhHHHHHHHHHHhhhcC
Q 009103 439 LGLSLFLGISI---PQYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVAMIVGTVLDNTLD 499 (543)
Q Consensus 439 vg~sl~~Gl~~---P~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g~l~aiiLn~~~~ 499 (543)
+|+++.+|++. |+++++ +|+.++++++||+++|+++|++||+++|
T Consensus 359 ~g~~~~~g~~~~~~p~~~~~----------------~p~~~~~~~~~~~~~g~~~ai~l~~~~p 406 (406)
T TIGR03173 359 VAVSLGLGLGPTVVPEFFSQ----------------LPAWAQTLFSSGIAVGAISAILLNLLFN 406 (406)
T ss_pred hHHHHHHHHHHHhhHHHHHH----------------ChHHHHHHHhCcHHHHHHHHHHHHhhcC
Confidence 99999999974 988877 7999999999999999999999999986
No 8
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=1.5e-60 Score=506.81 Aligned_cols=370 Identities=34% Similarity=0.556 Sum_probs=281.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHH-hcCCcceEeccchhhHHHHHHHH
Q 009103 48 PQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTL-FGTRLPTVMGPSAAFTLPVLSII 126 (543)
Q Consensus 48 ~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~-~G~rlPiv~Gpsf~~i~~~~~i~ 126 (543)
+|++++|+||+++|+++++++|.++++++|+ ++|+..+++++++++|++|++|++ +|+|+|+++|+|+.++.......
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~ 79 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGL-DADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVI 79 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhccc
Confidence 5899999999999999999999999999899 778889999999999999999999 89999999999999887322221
Q ss_pred hhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhccccch----
Q 009103 127 NDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNC---- 202 (543)
Q Consensus 127 ~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~~~---- 202 (543)
.. ++.+.++|++++|+++++|+++++++++++++|++|+|||.|.|.++++||+++.+.++++....
T Consensus 80 g~---------~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~ 150 (389)
T PF00860_consen 80 GM---------AESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNP 150 (389)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---B
T ss_pred cc---------ccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccc
Confidence 11 02234789999999999999999999999999999999999999999999999999988765422
Q ss_pred ----------hhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCcc
Q 009103 203 ----------VEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRS 272 (543)
Q Consensus 203 ----------~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd~~ 272 (543)
..++..+++..+.++.+. ++++|++++++|+++||++++.+|.. |++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ailigi~~g~i~~~~~g~~----------------~~~ 207 (389)
T PF00860_consen 151 DGLLVGDGKNLGLAVLTLLFILLLSLFL-------KGFLRKGAILIGIIAGWIVAAILGVV----------------DFS 207 (389)
T ss_dssp TT-B---HHHHHHHHHHHHHHHHHHHSS-------STTTTTHHHHHHHHHHHHHHHHHHHT----------------TSS
T ss_pred cccccccccccccccccchhhhhhhhhh-------hhhcccccchhhhhhhhhhhhccccc----------------ccC
Confidence 233444444444444443 45688999999999999999999843 443
Q ss_pred ccCCCCCccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcC
Q 009103 273 YLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 352 (543)
Q Consensus 273 ~~v~~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG 352 (543)
+.+.++||+.+|++++|++|+||+.+++.++.+++++++|++||+.++++..+++++++++++|++.+||++|+++|+||
T Consensus 208 ~~~~~~~~~~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G 287 (389)
T PF00860_consen 208 PSVSSAPWFSLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFG 287 (389)
T ss_dssp H-HHHS-SS--------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhc
Confidence 22567899999999999999999999999999999999999999999999999777668999999999999999999999
Q ss_pred CCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhhccCCC
Q 009103 353 SVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQFANNNS 432 (543)
Q Consensus 353 ~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~~~~~~ 432 (543)
+.|.|+|+ ||+|+++.||++||++...+++++++++++||++++++.||.+|+||++++++|+++++|+|.+++.|+||
T Consensus 288 ~~~~t~~~-en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~~ 366 (389)
T PF00860_consen 288 TSPTTTYS-ENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLDS 366 (389)
T ss_dssp ---EEE-H-HHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-S
T ss_pred CCCCcccc-ccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheecccCc
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccchhhhhHHHhhhhhhH
Q 009103 433 MRNIYILGLSLFLGISIPQ 451 (543)
Q Consensus 433 ~rn~~Ivg~sl~~Gl~~P~ 451 (543)
.||.+++++++.+|++++.
T Consensus 367 ~r~~~iv~~~l~~g~~i~~ 385 (389)
T PF00860_consen 367 ARNAFIVGLSLPLGLSIAF 385 (389)
T ss_dssp HHHHHHHHHHHHHHHH---
T ss_pred cccHHHHHHhHHHHHHHhc
Confidence 9999999999999999864
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.7e-35 Score=308.12 Aligned_cols=384 Identities=14% Similarity=0.164 Sum_probs=299.0
Q ss_pred cccccceecCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceE
Q 009103 33 QLQQLQYCIHSNP-PWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTV 111 (543)
Q Consensus 33 ~~~~~~y~~~~~p-p~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv 111 (543)
+.-|++|+++|+. ..++|+++|+++|++|.|.+.++|.+++++ |+| ...+..+|++.++++|++++++ +|+|+.
T Consensus 4 ~~~~~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~a-g~~---~~av~~AT~l~a~~gs~~mgl~-An~P~a 78 (436)
T COG2252 4 GDLDRFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGAA-GMP---VGAVFVATCLAAAIGSIAMGLY-ANLPIA 78 (436)
T ss_pred hHHHHHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHhc-CCC---chhHHHHHHHHHHHHHHHHHHH-HcCchh
Confidence 4457789999998 699999999999999999999999999985 777 4677889999999999999999 899999
Q ss_pred eccch---hhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCc-------cchH
Q 009103 112 MGPSA---AFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSP-------IVIV 181 (543)
Q Consensus 112 ~Gpsf---~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp-------~V~G 181 (543)
++|.. +|.. .+++..++ ..||+++++++++|+++++++++|+|+|++|.+|. ..+|
T Consensus 79 lapgmglnAfFa--ftvv~~~g------------i~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIG 144 (436)
T COG2252 79 LAPGMGLNAFFA--FTVVLGMG------------LSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIG 144 (436)
T ss_pred hcchhhHHHHHH--HHHHHhcC------------CcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHH
Confidence 99983 2222 22343343 57999999999999999999999999999999996 4588
Q ss_pred HHHHHHHHHHHHhhhcc---------ccc-hhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHH
Q 009103 182 PFVCVVGLGLFMRGFPL---------LGN-CVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILT 251 (543)
Q Consensus 182 ~~l~lIGl~l~~~~~~~---------~~~-~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg 251 (543)
.++++||+...+..+.+ +.+ .+.+++.++++++.+ ..|++ +.+++++|+..+++++++|
T Consensus 145 lFia~IgL~~~Givv~~~~tlv~LG~~~~p~vll~i~G~~l~~~L--~~~~i---------~Gaili~i~~~t~~g~~~g 213 (436)
T COG2252 145 LFIALIGLKNAGIVVANPATLVALGDFTSPGVLLAILGLLLIIVL--VSRKI---------KGAILIGILVTTILGIILG 213 (436)
T ss_pred HHHHHHHHhhCCeEEecCcceEEeecCCCchHHHHHHHHHHHHHH--HHhhc---------cHhhhHHHHHHHHHHHHhc
Confidence 88888888755443322 112 356677777776666 45554 7899999999999999998
Q ss_pred hhcCCCCCCcccccccccCccccCCCCCccccCcccccccc--ccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCC--
Q 009103 252 AAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTP--IFRASHVFGMIGAALVTSAESTGTFIAASRFAGAT-- 327 (543)
Q Consensus 252 ~~~~~~~~~~~~~~~~~vd~~~~v~~a~~~~~P~~~~fg~P--~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~-- 327 (543)
.... + .+.....|... |...+.+.. ...++.+..++.+.+++++|++|++.++++.++..
T Consensus 214 ~~~~--------------~-~~~~~~~p~~~-~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~ 277 (436)
T COG2252 214 IDVH--------------F-GGLVGAPPSLS-PIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDK 277 (436)
T ss_pred cccc--------------c-cccccCCCCcc-chhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCC
Confidence 4310 0 00011111100 111122221 11245556778999999999999999999998743
Q ss_pred CCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHH
Q 009103 328 APPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFA 407 (543)
Q Consensus 328 ~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlg 407 (543)
+.+.++.+|.+.+|++++++++++|+.+.|+|. |+...++..|.+.-.+.+++.++++.+.+.| +...+|..+.+
T Consensus 278 ~g~~~~~~~al~~D~v~t~~ga~~GtS~~t~yI-ESaaGva~GgrTGltavv~g~lFl~~lf~~P----l~~~vP~~Ata 352 (436)
T COG2252 278 NGKMPRIGKALLADSVATVVGALFGTSTVTAYI-ESAAGVAAGGRTGLTAVVTGLLFLLSLFFSP----LAALVPGYATA 352 (436)
T ss_pred CCCccccchHHHHhHHHHHHHHhcCCcchhhhh-hcccccccccccccHHHHHHHHHHHHHHHHH----HHHhCcHhhhh
Confidence 333579999999999999999999999999999 9999988888887778888888888876666 99999999999
Q ss_pred HHHHHHHHHHHHHHhHhHhhccCCCcccchhhhhHHHhhhhhhHhhhhccccCCCCCccccCccccchhhHhccchhHHH
Q 009103 408 AIYCVLLGIVAAVGITFIQFANNNSMRNIYILGLSLFLGISIPQYFASKTTEDGHGPVRTGGGWFNDIWNTIFSSPPTVA 487 (543)
Q Consensus 408 g~li~~fg~i~~~Gi~~l~~~~~~~~rn~~Ivg~sl~~Gl~~P~~~~~~~~~~~~~~~~~~~~~lp~~l~~~l~~gi~~g 487 (543)
++++++ |.++. +.++++||+|..+ ++|.++...+ +| +++.+.+|++.|
T Consensus 353 paLi~v-G~lM~---~~v~~id~~d~~e------------a~PaF~tiv~--------------mp--lTySIa~Gia~G 400 (436)
T COG2252 353 PALIIV-GALML---SSVKQIDWSDFTE------------AVPAFLTIVM--------------MP--LTYSIADGIAFG 400 (436)
T ss_pred HHHHHH-HHHHH---hhhccCCchhhhh------------hhHHHHHHHH--------------HH--HHHHHHhhHHHH
Confidence 999985 66665 4566899998766 4688887653 66 899999999999
Q ss_pred HHHHHHHhhhcC
Q 009103 488 MIVGTVLDNTLD 499 (543)
Q Consensus 488 ~l~aiiLn~~~~ 499 (543)
.+.+.+++....
T Consensus 401 fi~y~i~k~~~g 412 (436)
T COG2252 401 FISYVILKVFTG 412 (436)
T ss_pred HHHHHHHHHHhh
Confidence 999999998665
No 10
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.93 E-value=2e-23 Score=219.12 Aligned_cols=315 Identities=18% Similarity=0.222 Sum_probs=234.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhh
Q 009103 49 QALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIIND 128 (543)
Q Consensus 49 ~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~ 128 (543)
..+..|+..+++-+.+.+++-+--+++.|+|++|.++++++.++.+|++|++|+++ +|+|+++++|. .-...+.+. .
T Consensus 22 s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~-~r~Pi~~awSt-PGaAll~~~-~ 98 (395)
T TIGR00843 22 PTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIR-FKTPVLTAWSA-PGAALLVTG-F 98 (395)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCeeeecCc-hHHHHHHHh-c
Confidence 57889999999998888777666667799999999999999999999999999987 79999999993 222222221 1
Q ss_pred cCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhccccchhhhHHH
Q 009103 129 YNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLP 208 (543)
Q Consensus 129 ~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~~~~~i~l~ 208 (543)
.+ .+++++.|+.+++|++.+++|++|+++|++|++|+.+.+.+++-|.+...-..+....+.+.++..
T Consensus 99 ~~------------~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~~~pll~~~ 166 (395)
T TIGR00843 99 PG------------ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALDGLFLICFS 166 (395)
T ss_pred CC------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 11 579999999999999999999999999999999999999998877665544444444444544433
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCccccCCCCCccccCcccc
Q 009103 209 MLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQ 288 (543)
Q Consensus 209 ~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd~~~~v~~a~~~~~P~~~~ 288 (543)
.++..+ ..| |+.+++++++++++|.++++..|.. |..+ +. .+ +..| .
T Consensus 167 mll~~l----~~~-------r~~Pr~avl~aLlvG~iva~~~G~~----------------~~~~-~~-~~-l~~p---~ 213 (395)
T TIGR00843 167 MLLCWL----ASK-------AFAPRYAMIAALICGIAFSFALGDM----------------NPTD-LD-FK-IALP---Q 213 (395)
T ss_pred HHHHHH----HHH-------HhcchHHHHHHHHHHHHHHHHhcCC----------------Cccc-cc-cc-cccc---e
Confidence 322221 222 3456799999999999999888742 1111 11 01 2223 4
Q ss_pred ccccccchhHHHHH-HHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHH
Q 009103 289 WGTPIFRASHVFGM-IGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLL 367 (543)
Q Consensus 289 fg~P~f~~~~i~~~-~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i 367 (543)
|..|+||+...+.. ++.+++++....-.-.++.|..+++. +.|+-+.++|++|+++++||+++ -|...+
T Consensus 214 ~~~P~fs~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~~----p~~~~~~~tGl~sll~ApfGg~~------~nlaai 283 (395)
T TIGR00843 214 FIAPDFSFAHSLNLALPLFLVSLAGQFAPGIAALKAAGYNA----PAKPIIAAAGLAALFAAFAGGIS------IGIAAI 283 (395)
T ss_pred eeCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCCC----CchHHHHHHHHHHHHHhccCCch------hhhhHH
Confidence 66789988776654 58888998887666677778777643 36999999999999999999997 333333
Q ss_pred hhhc---------cCcch-HHHHHHHHHHHHHHh-hhHHHHHHhCCchhHHHH-HHHHHHHHHHHH
Q 009103 368 GLTH---------IGSRR-VVQISTAFMIFFSIF-GKFGAFFASIPLPIFAAI-YCVLLGIVAAVG 421 (543)
Q Consensus 368 ~~Tg---------v~SR~-~~~~ag~~li~l~~~-pk~~~ll~~IP~~Vlgg~-li~~fg~i~~~G 421 (543)
..+= -..|| ..+.+|++.++++++ +.+..+++.+|.+.+..+ -+.+++.+..+=
T Consensus 284 taAic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~~l 349 (395)
T TIGR00843 284 TAAICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAGNI 349 (395)
T ss_pred hHHHhcCcccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 2211 23354 358999999999999 789999999999999885 567778876433
No 11
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.92 E-value=2.1e-22 Score=221.90 Aligned_cols=317 Identities=20% Similarity=0.263 Sum_probs=231.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHH
Q 009103 47 WPQALLLAFQHYIVMLGTTVLISSTLVPL--MGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLS 124 (543)
Q Consensus 47 ~~~~~~~GlQh~l~m~~~~i~vPiila~a--~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~ 124 (543)
++..+++|+.-. .+++|..++.+ .|.|+ .+.++++-++.++.++||.+--.+.||..+....+..
T Consensus 21 l~~Dl~AGltva------~valP~ama~a~~aGv~p-------~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~ 87 (554)
T COG0659 21 LRGDLLAGLTVA------AVALPLAMAFAIAAGVPP-------EAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAA 87 (554)
T ss_pred hHHHHHHHHHHH------HHHhHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHH
Confidence 678999999854 44556666543 78997 6999999999999999987777799998666655444
Q ss_pred HHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhcccc----
Q 009103 125 IINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLG---- 200 (543)
Q Consensus 125 i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~---- 200 (543)
+..+.. .++++.++-+.+++|++++++|++|+ +++.+++|..|+-.++..||+.++..+++.+.
T Consensus 88 ~i~~~~-----------~~g~~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~ 155 (554)
T COG0659 88 VIASLV-----------ETGLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLAS 155 (554)
T ss_pred HHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 443110 16799999999999999999999998 99999999776666888888877666543211
Q ss_pred ------------------c---hhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCC
Q 009103 201 ------------------N---CVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNV 259 (543)
Q Consensus 201 ------------------~---~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~ 259 (543)
. .+.+++.++++++. .++. ..|.++.++++++++.+++.++....
T Consensus 156 ~~~~~~~~~~~l~~~~~~~~~~~~~lg~~~l~il~~----~~~~------~~~~P~~liaiv~~t~i~~~~~~~~~---- 221 (554)
T COG0659 156 KVSGFWAKVSALFTVLLTINLATLLLGLLTLAILLF----LPRL------TPRIPSPLIALVLGTLIVWIFPLDSL---- 221 (554)
T ss_pred cccchHHHHHHHHHhcccccHHHHHHHHHHHHHHHH----ccch------hhhCCcHHHHHHHHHHHHHHhcCCch----
Confidence 0 12334444433332 2322 13467789999999999998864310
Q ss_pred CcccccccccCccccCCCCCccccCcc-ccccccccch----hHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCC
Q 009103 260 PEQTKLSCRTDRSYLLSSAPWIKVPYP-FQWGTPIFRA----SHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVL 334 (543)
Q Consensus 260 ~~~~~~~~~vd~~~~v~~a~~~~~P~~-~~fg~P~f~~----~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~ 334 (543)
+.. +... ++|.. .+|+.|.+++ ..+...+.++++.++|++.+..+.+++.++ +.+.
T Consensus 222 --------~~G--~i~~-----~lp~~~~~~~~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d~ 282 (554)
T COG0659 222 --------RYG--EIPG-----SLPSGLPHFRLPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHDS 282 (554)
T ss_pred --------hcc--cCcc-----cCCcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCC
Confidence 011 0011 11211 1344455554 345556789999999999999999988764 5788
Q ss_pred CcchhhhchHHHHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHH-H
Q 009103 335 SRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCV-L 413 (543)
Q Consensus 335 ~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~-~ 413 (543)
||+++++|++|+++|+||++|.+... .+......+|.+||.+.++++++++++-++ ++.++..||.+++++++++ .
T Consensus 283 nrELiaqGiaNi~sglfgg~p~~g~~-srS~~nv~sGarT~lsgi~~a~~lll~l~~--~~~~~~~IP~a~Laavli~v~ 359 (554)
T COG0659 283 NRELIAQGIANIASGLFGGIPATGSI-SRSAINIKSGARTRLSGIIHAALLLLLLLF--LAPLVSYIPLAALAAVLILVG 359 (554)
T ss_pred CHHHHHhhHHHHHHHHhCCccccchh-HHHHHHHHhCCcChHHHHHHHHHHHHHHHH--HHHHHHhCcHHHHHHHHHHHH
Confidence 99999999999999999999999998 667777789999999999888887766554 6789999999999998875 4
Q ss_pred HHHHHHHHhHh
Q 009103 414 LGIVAAVGITF 424 (543)
Q Consensus 414 fg~i~~~Gi~~ 424 (543)
++++-...++.
T Consensus 360 ~~l~~~~~~~~ 370 (554)
T COG0659 360 WGLLDWSLLKP 370 (554)
T ss_pred HHhccHHHHHH
Confidence 55555544443
No 12
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.88 E-value=5.8e-20 Score=190.04 Aligned_cols=313 Identities=23% Similarity=0.297 Sum_probs=237.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhh
Q 009103 49 QALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIIND 128 (543)
Q Consensus 49 ~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~ 128 (543)
.++..|+-.+++-+.+.+++-+-.+++.|++++|+..++.+..+.+|+.|+..++. +|.|++.++|..... +.+...
T Consensus 6 s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl~-yR~Pi~~AWStPGaA--lL~~~~ 82 (378)
T PF03594_consen 6 SAVSAGFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSLR-YRMPIVTAWSTPGAA--LLATSL 82 (378)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCchhhcchHHHH--HHHHhc
Confidence 57888999999888888777666677799999999999999999999999999986 899999999854332 222221
Q ss_pred cCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhccccchhhhHHH
Q 009103 129 YNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLP 208 (543)
Q Consensus 129 ~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~~~~~i~l~ 208 (543)
.+ ++++++.|+.+++|++.++.|++|+++|+.|.+|+.+...+++-+-+...-..++...+++.+...
T Consensus 83 ~~------------~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGvLl~f~l~~f~a~~~~P~l~~~ 150 (378)
T PF03594_consen 83 PG------------YSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGVLLPFGLAAFTALQADPLLVGP 150 (378)
T ss_pred cC------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 12 679999999999999999999999999999999988888787755554444444555556666555
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCccccCCCCCccccCcccc
Q 009103 209 MLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQ 288 (543)
Q Consensus 209 ~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd~~~~v~~a~~~~~P~~~~ 288 (543)
.++.-++. |+ +.++++++.++++|.++++..|.. +... +. -++..| .
T Consensus 151 ml~~~l~~----~r-------~~pr~av~~al~~g~~~a~~~g~~----------------~~~~-~~--~~~~~p---~ 197 (378)
T PF03594_consen 151 MLAVFLLA----RR-------FSPRYAVLAALVAGVAVAALTGQL----------------HPSA-LQ--LSLAHP---V 197 (378)
T ss_pred HHHHHHHH----HH-------HcchhHHHHHHHHHHHHHHhcCCC----------------Cccc-cc--ccccee---E
Confidence 55444333 22 345789999999999988876532 1111 11 122223 5
Q ss_pred ccccccchhHHHHH-HHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHH
Q 009103 289 WGTPIFRASHVFGM-IGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLL 367 (543)
Q Consensus 289 fg~P~f~~~~i~~~-~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i 367 (543)
|-.|+||+++++.+ ++.+++++......-.++-|..|. ++..|+-+...|+++++.+.||+++ -|.+.+
T Consensus 198 ~~~P~Fs~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY----~~p~~~~~~~tGl~s~l~ApfGg~~------~nlAai 267 (378)
T PF03594_consen 198 FTTPEFSWSALVSLALPLFIVTMASQNLPGIAVLRAAGY----QPPVNPLITVTGLASLLAAPFGGHA------VNLAAI 267 (378)
T ss_pred EECCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHHcCC----CCCchHHHHHHHHHHHHHhhhchhh------hHHHHH
Confidence 67799999998776 589999999888887888777665 3568999999999999999999996 565555
Q ss_pred hhhcc---------CcchH-HHHHHHHHHHHHHh-hhHHHHHHhCCchhHHHH-HHHHHHHHHH
Q 009103 368 GLTHI---------GSRRV-VQISTAFMIFFSIF-GKFGAFFASIPLPIFAAI-YCVLLGIVAA 419 (543)
Q Consensus 368 ~~Tgv---------~SR~~-~~~ag~~li~l~~~-pk~~~ll~~IP~~Vlgg~-li~~fg~i~~ 419 (543)
...-| ..||. .+.+|++.+++|++ +.+..++...|.+.+..+ -+.+++.+..
T Consensus 268 taAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~~ 331 (378)
T PF03594_consen 268 TAAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLGG 331 (378)
T ss_pred HHHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 43222 24664 58999999999999 478899999999998885 4667777654
No 13
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.86 E-value=4.6e-19 Score=197.30 Aligned_cols=321 Identities=19% Similarity=0.173 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHH
Q 009103 47 WPQALLLAFQHYIVMLGTTVLISSTLVPL--MGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLS 124 (543)
Q Consensus 47 ~~~~~~~GlQh~l~m~~~~i~vPiila~a--~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~ 124 (543)
++..+++|+.-.+ +.+|..++.+ .|+++ ...++++.+..++.++||+..-++.||..+....+..
T Consensus 14 l~~Di~aGltv~~------~~iP~~~ayA~laglpp-------~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~ 80 (563)
T TIGR00815 14 FKGDLMAGLTVGI------LLIPQAMAYAILAGLSP-------IYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGS 80 (563)
T ss_pred hhhHHHHHHHHHH------HHHHHHHHHHHHcCCCc-------hhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHH
Confidence 6789999998544 4556666554 68997 5789999999999999998878899998654433344
Q ss_pred HHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhccc-----
Q 009103 125 IINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLL----- 199 (543)
Q Consensus 125 i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~----- 199 (543)
+..+++..+..+ ....+.+....+++|++++++|++|+ +++.+++|..|+..++..+|+.++..+++.+
T Consensus 81 ~v~~~~~~~~~~-----~~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~ 154 (563)
T TIGR00815 81 VIARVGLQYLFD-----CDAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISI 154 (563)
T ss_pred HHHHhcCCCCcc-----cHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 444443211100 02356667889999999999999998 9999999987777788888886654433211
Q ss_pred ------------------cc----hhhhHHHHHHHHHHHHHHhhhhcccchhh--hhhhHHHHHHHHHHHHHHHHHhhcC
Q 009103 200 ------------------GN----CVEIGLPMLVLLVICQQYLKRLHPKAHFI--VERFALLFCIGVVWAFAAILTAAGA 255 (543)
Q Consensus 200 ------------------~~----~~~i~l~~l~l~i~l~~~~~~~~~~~~~~--lr~~aiLigivvG~i~a~~lg~~~~ 255 (543)
.+ +|....+.++.++++ ...|++.++.++. ...+..|+.+++++++.+.++.. .
T Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l-~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~-~ 232 (563)
T TIGR00815 155 FNTRTDTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFL-LYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHK-K 232 (563)
T ss_pred CCCCCChHHHHHHHHHHhhhccccchHHHHHHHHHHHHH-HHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHccC-C
Confidence 00 222112222221111 1234332211111 12356788888888877766321 0
Q ss_pred CCCCCcccccccccCccccCCCCCccccCccccccccccchh----HHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCC
Q 009103 256 YNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRAS----HVFGMIGAALVTSAESTGTFIAASRFAGATAPPA 331 (543)
Q Consensus 256 ~~~~~~~~~~~~~vd~~~~v~~a~~~~~P~~~~fg~P~f~~~----~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~ 331 (543)
+ .++..+.+.. .+| .+..|.+|+. .+...+.++++.++|++...++.++..++ +
T Consensus 233 ~-----------~~~~~g~ip~----g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~----~ 290 (563)
T TIGR00815 233 Q-----------GVSILGHIPS----GLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGY----K 290 (563)
T ss_pred C-----------CeEEEeecCC----CCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----C
Confidence 0 0111111111 112 2334455544 44556789999999999999998887553 4
Q ss_pred CCCCcchhhhchHHHHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHH
Q 009103 332 HVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYC 411 (543)
Q Consensus 332 ~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li 411 (543)
.+.||++.++|++|+++|+||++|.+... ....+...+|.++|.+.++++++++++.++ ++.++..+|.++++++++
T Consensus 291 ~d~n~El~a~G~~N~~~~~fg~~p~~~s~-srs~~~~~~G~~t~~a~i~~~~~~l~~~l~--~~~~l~~iP~~~la~ili 367 (563)
T TIGR00815 291 IDANQELVAQGIANIVGSFFSCYPATGSL-SRTAVNAKAGCRTQLSGVVTAIVVLLVLLV--LTPLFYYIPQAALAAIII 367 (563)
T ss_pred CCCcHHHHHhhHHHHHHHHhCccCCCCcc-hHHHHHHhcCCcchHHHHHHHHHHHHHHHH--HHHHHHhChHHHHHHHHH
Confidence 67899999999999999999999999887 667777789999999999888887776555 567999999999999988
Q ss_pred HH
Q 009103 412 VL 413 (543)
Q Consensus 412 ~~ 413 (543)
++
T Consensus 368 ~~ 369 (563)
T TIGR00815 368 SA 369 (563)
T ss_pred HH
Confidence 63
No 14
>PRK11660 putative transporter; Provisional
Probab=99.86 E-value=5.9e-19 Score=196.58 Aligned_cols=318 Identities=18% Similarity=0.250 Sum_probs=207.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHH
Q 009103 46 PWPQALLLAFQHYIVMLGTTVLISSTLVPL--MGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVL 123 (543)
Q Consensus 46 p~~~~~~~GlQh~l~m~~~~i~vPiila~a--~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~ 123 (543)
.++..+++|++-.+ +.+|..++.+ .|+++ +..++++-+++++.+++|+..-++.||.........
T Consensus 28 ~l~~D~iAGltv~~------~~iPq~mayA~lag~pp-------~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~ 94 (568)
T PRK11660 28 RFTRDLIAGITVGI------IAIPLAMALAIASGVPP-------QYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILY 94 (568)
T ss_pred hhhHHHHHHHHHHH------HHHHHHHHHHHHcCCCh-------HHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHH
Confidence 37789999998654 4455555544 68887 568999999999999999887889999865433222
Q ss_pred HHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhccc----
Q 009103 124 SIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLL---- 199 (543)
Q Consensus 124 ~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~---- 199 (543)
.+..+ ++++.+..+.+++|++++++|++|+ +++.+++|..|+..++..+|+.++..+++..
T Consensus 95 ~~~~~--------------~~~~~~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~ 159 (568)
T PRK11660 95 PVSQQ--------------FGLAGLLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQ 159 (568)
T ss_pred HHHHH--------------hhHHHHHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 22222 3456677789999999999999997 8999999977777787777775544333211
Q ss_pred ----c---------------c-h---hhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCC
Q 009103 200 ----G---------------N-C---VEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAY 256 (543)
Q Consensus 200 ----~---------------~-~---~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~ 256 (543)
. + + ..+++.++++++++ +++. .|.+..++++++++++++.++..+ +
T Consensus 160 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~lll~~----~~~~------~~iP~~li~iiv~t~~~~~~~~~~-~ 228 (568)
T PRK11660 160 MAHVPEHYLEKVGALFQALPTINWGDALIGIVTLGVLILW----PRLK------IRLPGHLPALLAGTAVMGVLNLLG-G 228 (568)
T ss_pred CCCCCccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH----Hhhc------ccCchHHHHHHHHHHHHHHHhccC-C
Confidence 0 0 1 22344444433332 3221 134566888999999888876421 0
Q ss_pred CCCCccccccccc-Ccc-c-cCCC-CCccccCcccccccc-------ccchhH----HHHHHHHHHHHHHHhHhHHHHHH
Q 009103 257 NNVPEQTKLSCRT-DRS-Y-LLSS-APWIKVPYPFQWGTP-------IFRASH----VFGMIGAALVTSAESTGTFIAAS 321 (543)
Q Consensus 257 ~~~~~~~~~~~~v-d~~-~-~v~~-a~~~~~P~~~~fg~P-------~f~~~~----i~~~~~~~lv~~~eslg~~~av~ 321 (543)
+...-+....... |-. . .+.. .|-+.+| +..+ .++++. +...+.+.++..+|++.+..+.+
T Consensus 229 ~v~~vg~~~~~~~~~g~~~~~ip~~~p~~~~p----~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~ 304 (568)
T PRK11660 229 HVATIGSRFHYVLADGSQGNGIPPLLPQFVLP----WNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLD 304 (568)
T ss_pred CceeecccccccccccccccCCCCCCCCCCCC----ccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 000 0 0000 1111112 1111 235443 44566788999999998888887
Q ss_pred hhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhC
Q 009103 322 RFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASI 401 (543)
Q Consensus 322 ~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~I 401 (543)
+..++ +.+.||++.++|++|+++|+||++|.+++. ....+...+|.++|.+.+++++++++.-++ ++.++..|
T Consensus 305 ~~~~~----~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~-srSa~n~~aGarT~la~iv~a~~~ll~ll~--l~~ll~~i 377 (568)
T PRK11660 305 GMTGT----KHSANSELVGQGLGNIVAPFFGGITATAAI-ARSAANVRAGATSPISAVIHALLVLLALLV--LAPLLSYL 377 (568)
T ss_pred HhcCC----CCCCcHHHHHHhHHHHHHHHhCcccccchH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHHH--HHHHHHhC
Confidence 76543 467999999999999999999999999986 555666788999999988777766544322 44599999
Q ss_pred CchhHHHHHHHH
Q 009103 402 PLPIFAAIYCVL 413 (543)
Q Consensus 402 P~~Vlgg~li~~ 413 (543)
|.++++++++++
T Consensus 378 P~~vLa~ili~~ 389 (568)
T PRK11660 378 PLSAMAALLLMV 389 (568)
T ss_pred cHHHHHHHHHHH
Confidence 999999998863
No 15
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=3.5e-18 Score=173.20 Aligned_cols=314 Identities=22% Similarity=0.290 Sum_probs=237.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhh
Q 009103 49 QALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIIND 128 (543)
Q Consensus 49 ~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~ 128 (543)
+++..|++.+++-+++.+++-+--+++.|.+++|++.++.+..+.+|+.|+.-++. +|.|++.++|..... +.+.+.
T Consensus 21 ~~l~ag~va~~vG~~~s~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~-yR~Pv~~aWSTPG~a--ll~asl 97 (402)
T COG3135 21 QTLLAGFVAVLVGYASSLAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLR-YRVPVLTAWSTPGAA--LLVASL 97 (402)
T ss_pred hhhhhhhHHheeccCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-hccceeeeecCccHH--HHHhcc
Confidence 78999999999999888877666677789999999999999999999999999986 899999999854433 222221
Q ss_pred cCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhccccchhhhHHH
Q 009103 129 YNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLP 208 (543)
Q Consensus 129 ~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~~~~~i~l~ 208 (543)
.+ .++.++.|+.+++|.+.++.|.+|.++|+++.+||.+.-.++..|=+...-.+++...++..+.+.
T Consensus 98 ~g------------~s~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGILL~F~l~a~~a~~~~p~l~lp 165 (402)
T COG3135 98 GG------------LSFAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGILLRFGLKAFKALPTQPLLVLP 165 (402)
T ss_pred CC------------CCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccCCChHHHHH
Confidence 22 679999999999999999999999999999999998776676644333333444555556666655
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCccccCCCCCccccCcccc
Q 009103 209 MLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQ 288 (543)
Q Consensus 209 ~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd~~~~v~~a~~~~~P~~~~ 288 (543)
.++..++. |. +-.+++++..+++|..++...|..+ + .+ .....+.| .
T Consensus 166 mv~~~ll~----r~-------f~pr~aV~aalvvgv~va~~~G~~~---~----------~~------~~~~~~~p---~ 212 (402)
T COG3135 166 MVLAYLLA----RV-------FAPRYAVIAALVVGVLVAALLGDLH---T----------AL------VALEISTP---T 212 (402)
T ss_pred HHHHHHHH----HH-------cCchHHHHHHHHHHHHHHHHhCccc---c----------cc------cccccCcc---e
Confidence 55444333 32 2347899999999999999887431 0 11 12223345 5
Q ss_pred ccccccchhHHHHH-HHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHH
Q 009103 289 WGTPIFRASHVFGM-IGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLL 367 (543)
Q Consensus 289 fg~P~f~~~~i~~~-~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i 367 (543)
|-.|+||+.+++.+ ++.+++.|......-.|+-|..|.+ +..+.-+.+.|+.+++++.||++. -|.+.+
T Consensus 213 ~v~P~Fs~~A~l~lalPL~lvtmasQN~pGiAvLka~gY~----pp~~pl~~~TGl~sll~ApfG~~t------~nLaAI 282 (402)
T COG3135 213 WVTPEFSFAAMLSLALPLFLVTMASQNLPGIAVLKAAGYQ----PPPSPLIVATGLASLLSAPFGGHT------VNLAAI 282 (402)
T ss_pred eeCCcccHHHHHHHhHHHHHHHHHhccCccceeehhcCCC----CCCchHHHHhHHHHHHhcccccce------ecHHHH
Confidence 77799999988875 5899999998888878877776653 456788999999999999999985 566555
Q ss_pred hhhccC---------cch-HHHHHHHHHHHHHHh-hhHHHHHHhCCchhHHHH-HHHHHHHHHHH
Q 009103 368 GLTHIG---------SRR-VVQISTAFMIFFSIF-GKFGAFFASIPLPIFAAI-YCVLLGIVAAV 420 (543)
Q Consensus 368 ~~Tgv~---------SR~-~~~~ag~~li~l~~~-pk~~~ll~~IP~~Vlgg~-li~~fg~i~~~ 420 (543)
...-|. .|| +...+|++-++.|+| +.+.+++...|.+.+..+ -+.+.+.+..+
T Consensus 283 tAAic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLALlg~~~~~ 347 (402)
T COG3135 283 TAAICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLALLGTLGNS 347 (402)
T ss_pred HHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHH
Confidence 544332 355 468999999999999 479999999999988774 45556665543
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.53 E-value=4.4e-14 Score=143.72 Aligned_cols=240 Identities=20% Similarity=0.224 Sum_probs=153.2
Q ss_pred HhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhcccc-----------------------c--hh---hhHHHHHHHH
Q 009103 162 LGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLG-----------------------N--CV---EIGLPMLVLL 213 (543)
Q Consensus 162 lg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~-----------------------~--~~---~i~l~~l~l~ 213 (543)
+|++|+ +++.+++|..|+..++..+|+.++..+++.+. + +| .++..+++++
T Consensus 1 lGllrl-G~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 79 (280)
T PF00916_consen 1 LGLLRL-GFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFL 79 (280)
T ss_pred Cccccc-cHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHH
Confidence 367786 99999999888777888888866655443210 0 11 1222222222
Q ss_pred HHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCccccCC-CCCccccCcccccccc
Q 009103 214 VICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLS-SAPWIKVPYPFQWGTP 292 (543)
Q Consensus 214 i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd~~~~v~-~a~~~~~P~~~~fg~P 292 (543)
... ++.++.. +.+...+.+..++.+++++++++...... . .++..+.+. ..|.+.+|. .
T Consensus 80 ~~~-~~~~~~~-~~~~~~~~p~~li~vv~~~~~~~~~~~~~-~-----------~v~~~~~i~~~lp~~~~p~-~----- 139 (280)
T PF00916_consen 80 LII-RLLPKRL-PSRFWPPIPAPLIVVVLGTLLSWLFLLDK-Y-----------GVAIVGEIPSGLPPPSLPS-F----- 139 (280)
T ss_pred hhh-hhhhhhc-cccccccccccceeeehhhhhhhhhhhcc-c-----------cccccccccccCccccCcc-c-----
Confidence 222 1222100 11122345567888888888877664211 0 112111121 123333332 0
Q ss_pred ccch----hHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHh
Q 009103 293 IFRA----SHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLG 368 (543)
Q Consensus 293 ~f~~----~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~ 368 (543)
.+++ ..+...+.++++..+|++.+.+++++..+ ++.+.||+++++|++|+++|+||++|.+... .+..+..
T Consensus 140 ~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~----~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~-srs~~~~ 214 (280)
T PF00916_consen 140 DISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTG----YRIDPNQELIALGLANIVSGLFGGMPGSGSF-SRSAVNY 214 (280)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHhhhhhccccc----ccCCcHHHHHHhhhccccchhhccccccccc-ccchHHH
Confidence 3333 34455678999999999998888877654 3457999999999999999999999999888 6667777
Q ss_pred hhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHH-HHHHHHHHHhHhHhhcc
Q 009103 369 LTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCV-LLGIVAAVGITFIQFAN 429 (543)
Q Consensus 369 ~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~-~fg~i~~~Gi~~l~~~~ 429 (543)
.+|.+||.+.++++++++++-++ ++.++..||.+++++++++ .+.++...-++.+.|.+
T Consensus 215 ~~Ga~t~~s~~~~~~~~l~~l~~--~~~~l~~iP~~~La~ili~~~~~l~~~~~~~~~~~~~ 274 (280)
T PF00916_consen 215 RAGARTRLSGLISALFVLLVLLF--LAPLLAYIPKAVLAAILIVVGISLIDWSSLRRLWRVS 274 (280)
T ss_pred hcCcceeehhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhcCC
Confidence 89999999988888877654433 4569999999999999876 44555555555554433
No 17
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=99.52 E-value=2.9e-12 Score=144.74 Aligned_cols=315 Identities=18% Similarity=0.197 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHh--cCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHH-HHhhcCCCCCCCccch
Q 009103 64 TTVLISSTLVPL--MGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLS-IINDYNDGSFTSEHDR 140 (543)
Q Consensus 64 ~~i~vPiila~a--~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~-i~~~~g~~~~~~~~~~ 140 (543)
+++.+|.-++.+ +|+++ ...++.+-++.++..+||+-.++-.||-. .+..+.. +..+. ..... +...
T Consensus 91 g~l~VPQ~iaYa~la~lpp-------iyGLYssf~~~~iY~~fGtsr~isiG~~a-v~sLmv~~~v~~~-v~~~~-~~~~ 160 (665)
T KOG0236|consen 91 GSLSVPQGLAYALLAGLPP-------IYGLYSSFFPPLIYAIFGTSRHVSIGPFA-VVSLMVGTVVSQV-VLSEA-PSND 160 (665)
T ss_pred eeeecchHHHHHHHcCCCh-------HHHHHHHHHHHHHheeccCCCcccccHHH-HHHHHHHHHHHHH-HhccC-CCcC
Confidence 466778888766 68887 69999999999999999999999888852 2222211 11110 00000 0001
Q ss_pred hhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCc-cchHHHHHHHHHHHHHhh------hcccc-------------
Q 009103 141 FRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSP-IVIVPFVCVVGLGLFMRG------FPLLG------------- 200 (543)
Q Consensus 141 ~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp-~V~G~~l~lIGl~l~~~~------~~~~~------------- 200 (543)
..+.++.+....+++|++|+++|++|+ +++.+++|. ++.| ++...++...-.+ +.+..
T Consensus 161 ~~~~i~va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~G-Ft~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~ 238 (665)
T KOG0236|consen 161 IATTIQVATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSG-FTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVF 238 (665)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhH-hhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeH
Confidence 125688888999999999999999998 999999995 5555 4444444332222 22110
Q ss_pred ----c------hhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccC
Q 009103 201 ----N------CVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTD 270 (543)
Q Consensus 201 ----~------~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd 270 (543)
+ ++.+++..++++.+...+.++..+ .-++.....-++.+++++++++.+.....+.. ..++
T Consensus 239 ~~~~~~~~~~~~~~~~l~~l~~L~~~k~~~~~~~~-k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~--------~~~~ 309 (665)
T KOG0236|consen 239 DLLANLPKTLATLVLSLIFLVVLLLTKELNPKFKK-KLFSVPIPFELIVVIIGTLISYIFRLEGRYGP--------IIVG 309 (665)
T ss_pred HhhhcccccchhhhhHHHHHHHHHHHHHhhhhhcc-cceeecccHHHHHHHHHHHHHHHhccccccCC--------eeec
Confidence 0 133444444433222212222111 11123445689999999999988764321100 0111
Q ss_pred ccccCC-CCCccccCccccccccccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhh
Q 009103 271 RSYLLS-SAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEG 349 (543)
Q Consensus 271 ~~~~v~-~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsg 349 (543)
.+. ..|..++|. +.+....+...+.+.++.++|+++-.++.++.-+ .+-+-||++++-|++|++++
T Consensus 310 ---~i~~g~~~~~lp~------~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~----y~vd~nqELiAlG~~Ni~sS 376 (665)
T KOG0236|consen 310 ---EIPRGFPPPSLPP------LSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHG----YKVDSNQELIALGISNILSS 376 (665)
T ss_pred ---cCCCCCCCCCCCC------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CeeCCChHHHHHHHHHHhhh
Confidence 011 112222221 1222345666888999999999877776666544 34578999999999999999
Q ss_pred hcCCCCccccccchhhHHhhhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHH-HHH
Q 009103 350 IFGSVVGTTASVENVGLLGLTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCV-LLG 415 (543)
Q Consensus 350 lfG~~~~tt~s~en~G~i~~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~-~fg 415 (543)
+|++.|.+... .+..+...+|+.++.+.+..++..++.-+ .++.++..||.++++++.+. +.+
T Consensus 377 ff~~~p~tgs~-sRSav~~~sG~~T~~s~i~~~~~vl~~l~--~l~p~f~~iP~~vLaaIIi~a~~~ 440 (665)
T KOG0236|consen 377 FFGCYPTTGSF-SRSAVNIKSGGRTQVAGIVSAALVLLALL--FLGPLFYYIPKCVLAAIIISALIG 440 (665)
T ss_pred hhceEcccchh-hHHHHHhhcCCcchHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHhhH
Confidence 99999999988 88888889999999886555554433322 25669999999999998775 444
No 18
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.54 E-value=0.00017 Score=83.62 Aligned_cols=313 Identities=17% Similarity=0.191 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcce-Eeccch---hhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHH
Q 009103 87 IQSLLFMSGLNTLLQTLFGTRLPT-VMGPSA---AFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVL 162 (543)
Q Consensus 87 i~~tl~~sGI~Tllq~~~G~rlPi-v~Gpsf---~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~ill 162 (543)
++=++++++++.++.++++.. |+ +.|.+. .|.-.+..++..++. .-++...-..+.++++.+++
T Consensus 403 v~E~Llstai~Giifslf~GQ-PL~IlG~TGPilvF~~~ly~~c~~~~~-----------~yl~~~~WigiW~~~~~~ll 470 (900)
T TIGR00834 403 VSELLISTAVQGVLFALLAAQ-PLLVVGFSGPLLVFEEAFFSFCESNGL-----------EYLVGRVWIGLWLVLLVLLL 470 (900)
T ss_pred HHHHHHHHHHHHHHHhhhcCC-ceEEecCcccHHHHHHHHHHHHhhcCC-----------chHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999644 55 456652 233333333333321 22333444567888899999
Q ss_pred hhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhcccc------------------------------------------
Q 009103 163 GYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLG------------------------------------------ 200 (543)
Q Consensus 163 g~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~~------------------------------------------ 200 (543)
+.+.. ..+.|+++.-.--.+-++|++..+..++..+.
T Consensus 471 a~~~~-s~lvryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (900)
T TIGR00834 471 VATEG-SFLVRYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTL 549 (900)
T ss_pred HHHhH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccccc
Confidence 98886 78899999866555556666644443331100
Q ss_pred ---ch---hhhHHHHHH---HHHHHHHHhhhhcc------cchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCccccc
Q 009103 201 ---NC---VEIGLPMLV---LLVICQQYLKRLHP------KAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKL 265 (543)
Q Consensus 201 ---~~---~~i~l~~l~---l~i~l~~~~~~~~~------~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~ 265 (543)
+| ...++..++ .++.+..++|++.+ +.|+.+.-+++.+++++-+.+.+.++... ..
T Consensus 550 ~~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~v~--~~------- 620 (900)
T TIGR00834 550 GGNNCRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGDTY--TQ------- 620 (900)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhccCc--cc-------
Confidence 00 122332222 23344555555422 12344556889999999888888665211 00
Q ss_pred ccccCccccC---C--CCCccccCccccccccccc-hhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchh
Q 009103 266 SCRTDRSYLL---S--SAPWIKVPYPFQWGTPIFR-ASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIG 339 (543)
Q Consensus 266 ~~~vd~~~~v---~--~a~~~~~P~~~~fg~P~f~-~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~ 339 (543)
..+.+..+ . .-.|+--|.......|.+. +.++++.+.+++.-++|+-=+..-+++- +.+-.+....+=.+.
T Consensus 621 --kl~Vp~~f~pt~p~~R~W~i~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~-e~kLkKgsgyH~Dll 697 (900)
T TIGR00834 621 --KLSVPSGLKVTNPSARGWFIPPLGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKK-ERKLKKGSGFHLDLL 697 (900)
T ss_pred --ccCCCCCcCCCCCCCCCeEEccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCc-cccCCCCcccchHHH
Confidence 11111001 0 1245522210000113232 4567777888888888887544433331 112222334566788
Q ss_pred hhchHHHHhhhcCCCCccccccchhhHHh-h---------------hccC-cchHHHHHHHHHHHHHHhhhHHHHHHhCC
Q 009103 340 LQGIGMLVEGIFGSVVGTTASVENVGLLG-L---------------THIG-SRRVVQISTAFMIFFSIFGKFGAFFASIP 402 (543)
Q Consensus 340 ~dGl~~ilsglfG~~~~tt~s~en~G~i~-~---------------Tgv~-SR~~~~~ag~~li~l~~~pk~~~ll~~IP 402 (543)
.-|+-+.++|++|-...++...++.--+. + .+|. .|...+..+++. .+++ -+..++..||
T Consensus 698 llg~~~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLi-glsv--~~~PvL~~IP 774 (900)
T TIGR00834 698 LVVGMGGVAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLV-GLSI--LMEPILKRIP 774 (900)
T ss_pred HHHHHHHHHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHH-HHHH--HHHHHHhhcc
Confidence 89999999999998766655323332211 1 1222 355555555432 2222 2445899999
Q ss_pred chhHHHHHHHHHHHHHHHHhHhHhhc
Q 009103 403 LPIFAAIYCVLLGIVAAVGITFIQFA 428 (543)
Q Consensus 403 ~~Vlgg~li~~fg~i~~~Gi~~l~~~ 428 (543)
.+|+.|+.+|| |.-...|.|...++
T Consensus 775 ~aVL~GvFlYM-Gv~SL~GnQ~~~Ri 799 (900)
T TIGR00834 775 LAVLFGIFLYM-GVTSLSGIQLFDRL 799 (900)
T ss_pred HHHHHHHHHHH-HHhhcccCHHHHHH
Confidence 99999999995 77788888877654
No 19
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=98.51 E-value=0.00011 Score=83.45 Aligned_cols=344 Identities=13% Similarity=0.150 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccch---hhHHHHHHHHhhcCCC
Q 009103 56 QHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSA---AFTLPVLSIINDYNDG 132 (543)
Q Consensus 56 Qh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf---~~i~~~~~i~~~~g~~ 132 (543)
-..+.++.+++...+..+..++-.. +-..-++=+++...++.++.+++|..--+++|++. .|.-.+.-++..++.
T Consensus 364 a~~lfiYfa~l~P~ItFG~ll~~~T-dg~~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~- 441 (876)
T KOG1172|consen 364 AATLFIYFACLLPAITFGGLLGEAT-DGLIGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGL- 441 (876)
T ss_pred hHHHHHHHHhhhhHhhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCCC-
Confidence 4455555555554444444333222 33444678899999999999999755445666663 233333444444331
Q ss_pred CCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHHHHHHHHhhhc-----------cc--
Q 009103 133 SFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFP-----------LL-- 199 (543)
Q Consensus 133 ~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~-----------~~-- 199 (543)
+-++-..-..+.+.++.++++++.. ..+.++|+...-=.+-++|.+..+..++. +.
T Consensus 442 ----------dyl~~r~wVglW~~~l~illaa~~a-s~lv~~~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~~~~ 510 (876)
T KOG1172|consen 442 ----------DYLAFRAWVGLWTAFLLILLAATNA-SSLVKYITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIEFDS 510 (876)
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Confidence 2234444456788888999998886 88888888754444444444433333322 00
Q ss_pred ------------c--------------chhhhHHHHHHHHHHHHHHhhhhccc------chhhhhhhHHHHHHHHHHHHH
Q 009103 200 ------------G--------------NCVEIGLPMLVLLVICQQYLKRLHPK------AHFIVERFALLFCIGVVWAFA 247 (543)
Q Consensus 200 ------------~--------------~~~~i~l~~l~l~i~l~~~~~~~~~~------~~~~lr~~aiLigivvG~i~a 247 (543)
. ++..++++..+..+.++.++|++.++ .|.++.-+++.+++++-..+.
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~ 590 (876)
T KOG1172|consen 511 KPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLID 590 (876)
T ss_pred cCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHH
Confidence 0 01123333333344556667766332 234455678999999998888
Q ss_pred HHHHhhcCCCCCCcccccccccCccccCCC-CCccccCccccccccccc-hhHHHHHHHHHHHHHHHhHhHHHHHHhhhC
Q 009103 248 AILTAAGAYNNVPEQTKLSCRTDRSYLLSS-APWIKVPYPFQWGTPIFR-ASHVFGMIGAALVTSAESTGTFIAASRFAG 325 (543)
Q Consensus 248 ~~lg~~~~~~~~~~~~~~~~~vd~~~~v~~-a~~~~~P~~~~fg~P~f~-~~~i~~~~~~~lv~~~eslg~~~av~~~~~ 325 (543)
++.+.. .+..- ..+..++..... ..|+-.|.- ..|.+. ..++++.+.+++.-++|+-=+-.-+++. +
T Consensus 591 ~~~~~~--~~~kl-----~vp~~~~~t~~~~rgw~v~~~~---~~P~~~~~~A~ipalll~iLiFmDqqIts~iv~rk-e 659 (876)
T KOG1172|consen 591 YFGGSV--ETPKL-----PVPSVFPPTWPFDRGWFVPPFG---KNPWWYVFAALIPALLLTILIFMDQQITAVIVNRK-E 659 (876)
T ss_pred hhcccc--CCCcc-----ccCcCCCCCCcccCCeeeCCCC---CCCHHHHHHHHHHHHHHHHHHHhcchHHHHHhhcc-c
Confidence 877531 11100 000111111111 245443310 112121 3456666777888888876433323322 1
Q ss_pred CCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHhhh----------------ccC-cchHHHHHHHHHHHH
Q 009103 326 ATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLT----------------HIG-SRRVVQISTAFMIFF 388 (543)
Q Consensus 326 ~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~~T----------------gv~-SR~~~~~ag~~li~l 388 (543)
.+-.+....+=.+..-|+-+.++|++|-...++...++.--+..= +|. .|......+++..
T Consensus 660 ~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvg-- 737 (876)
T KOG1172|consen 660 NKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVG-- 737 (876)
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHH--
Confidence 122223345557899999999999999888777654555433321 122 2444444444333
Q ss_pred HHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhh
Q 009103 389 SIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQF 427 (543)
Q Consensus 389 ~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~ 427 (543)
+.-....++..||.+|+.|+.+|| |.=...|.|..++
T Consensus 738 -ls~~~~pvL~~IP~~VL~GvFlYM-gv~SL~Gnqf~eR 774 (876)
T KOG1172|consen 738 -LSVLLLPVLKLIPMPVLYGVFLYM-GVSSLPGNQFFER 774 (876)
T ss_pred -HHHHHHHHHhhccHHHHHHHHHHH-hhccCCccHHHHH
Confidence 222355689999999999999985 6656666666543
No 20
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=97.67 E-value=0.013 Score=61.22 Aligned_cols=341 Identities=14% Similarity=0.172 Sum_probs=176.4
Q ss_pred ccccceecCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhh------HHHHHHHHHHHHHHHHHHHHhcCC
Q 009103 34 LQQLQYCIHSNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDK------GRVIQSLLFMSGLNTLLQTLFGTR 107 (543)
Q Consensus 34 ~~~~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~------~~li~~tl~~sGI~Tllq~~~G~r 107 (543)
-+|..|+.||--|.. +|.---.+|+++..+ ..++.+|++++-. ..++.+.+|+.-+.+++.- .++
T Consensus 52 ~rD~rfE~ED~vPAl----AgtIGkivMvsAv~a---afA~~lgL~~~Fv~envR~EllI~a~lFvil~Sgfl~P--~an 122 (492)
T PF11840_consen 52 FRDYRFEWEDLVPAL----AGTIGKIVMVSAVAA---AFAAPLGLSPEFVIENVRYELLIAALLFVILFSGFLNP--RAN 122 (492)
T ss_pred CcccccchHHhhHHH----HhhhhHHHHHHHHHH---HHhhccCCChhHhhhhhhhhhhHHHHHHHHHHHhccCc--ccc
Confidence 456667777766543 333333445433221 2334467776422 2333344344333333321 355
Q ss_pred cceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHHHHH
Q 009103 108 LPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVV 187 (543)
Q Consensus 108 lPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l~lI 187 (543)
++=-.||=-..++ .+++ .| +-+.++| ++-|++-++++++|--.|+.++=..-|-|..+...
T Consensus 123 LAGthgPmIpLIp---~iva-aG-------------gHPLalg--ilvg~fGlil~~~kggS~L~~LTs~gv~ggLllyl 183 (492)
T PF11840_consen 123 LAGTHGPMIPLIP---LIVA-AG-------------GHPLALG--ILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYL 183 (492)
T ss_pred ccCCCCCcchhhH---HHHH-cC-------------CCcHHHH--HHHHHHHHHHHHhcchhHHHhhhcCccccceeeee
Confidence 5555566433332 2222 11 2244444 45688999999998888999999988888776666
Q ss_pred HHH----HHHhhhcccc--chhhhHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 009103 188 GLG----LFMRGFPLLG--NCVEIGLPMLVLLVICQQYLKRLHPKAHFIVERFALLFCIGVVWAFAAILTAAGAYNNVPE 261 (543)
Q Consensus 188 Gl~----l~~~~~~~~~--~~~~i~l~~l~l~i~l~~~~~~~~~~~~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~ 261 (543)
|+. .+.+-..+.. +...++.+.+.+.+++-.|+.++. || ..++-++-+++-++++.+|..
T Consensus 184 G~~G~~~qi~kl~~wa~~~~~~~i~fvvi~~tiv~Ya~L~k~~---Kr---WLaIPl~~~~a~~~a~~lGa~-------- 249 (492)
T PF11840_consen 184 GFVGLIGQIKKLFAWANGFDMGYIAFVVIIVTIVLYAYLAKIE---KR---WLAIPLCSILAGVLAFALGAP-------- 249 (492)
T ss_pred hhhhHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---cc---hhhhhHHHHHHHHHHHHcCCC--------
Confidence 652 2222111111 234466666666666666776553 23 456666666666777777752
Q ss_pred ccccccccCcccc-----CCCCCccccCccccccccccchhHHHHHHHHHHHH----HHHhHhHHHHHHhhhCCCCCCC-
Q 009103 262 QTKLSCRTDRSYL-----LSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVT----SAESTGTFIAASRFAGATAPPA- 331 (543)
Q Consensus 262 ~~~~~~~vd~~~~-----v~~a~~~~~P~~~~fg~P~f~~~~i~~~~~~~lv~----~~eslg~~~av~~~~~~~~~~~- 331 (543)
.||... ....=|..=-.-++.|+|.++ ..+..+++++.. .-|.+|+-. -++..- +++++
T Consensus 250 -------f~f~t~pglp~lnP~YWWge~tGw~LglP~~~--hfiav~PFAiLAVaMWSpDflghrv-Fqelny-pk~~~k 318 (492)
T PF11840_consen 250 -------FEFTTEPGLPNLNPMYWWGEETGWQLGLPTLE--HFIAVLPFAILAVAMWSPDFLGHRV-FQELNY-PKETKK 318 (492)
T ss_pred -------ceeecCCCCCCCCCcccccCCcccccCCCcHH--HHHHhccHHHHHHHHhCchHHHHHH-HHHhcC-chhhcc
Confidence 122100 000111111122356677543 333333333322 235555422 344332 21111
Q ss_pred --CCCCcchhhhchHHHHhhhcCCCCccccccchhhHHh-hhccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHH
Q 009103 332 --HVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLG-LTHIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAA 408 (543)
Q Consensus 332 --~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~-~Tgv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg 408 (543)
-+++..+....+=+++++.+|+-..+++. ..-=+-+ ..|.-=+--.+..|+++++.++..-=.- ++ +=.||+--
T Consensus 319 vlMnvDDTm~~~siRQ~vGs~lGGgN~~SsW-gTymIPaaIaKRPIpggAiLtg~~Ci~~av~GyPMd-la-vw~Pvl~v 395 (492)
T PF11840_consen 319 VLMNVDDTMTMCSIRQIVGSILGGGNIASSW-GTYMIPAAIAKRPIPGGAILTGLLCIVAAVWGYPMD-LA-VWPPVLRV 395 (492)
T ss_pred eeecccchhHHHHHHHHHhhcccCCcccccc-hhhhhhHHHhcCCCCchHHHHHHHHHHHHHhcCcch-hh-hcccHHHH
Confidence 26889999999999999999997544433 2211111 1222222235778888888876641001 11 22456666
Q ss_pred HHHH-HHHHHHHHHhHhHhhccC
Q 009103 409 IYCV-LLGIVAAVGITFIQFANN 430 (543)
Q Consensus 409 ~li~-~fg~i~~~Gi~~l~~~~~ 430 (543)
++++ +|--+.-.|+|+.++-+-
T Consensus 396 ALlvGVflPLleAGmqm~r~~k~ 418 (492)
T PF11840_consen 396 ALLVGVFLPLLEAGMQMTRKGKT 418 (492)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCc
Confidence 6655 666667789888875443
No 21
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=96.86 E-value=0.00093 Score=73.55 Aligned_cols=185 Identities=12% Similarity=0.139 Sum_probs=2.1
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCccccCCC-CCccccCccccccccccc-hhHHHHHHHH
Q 009103 228 HFIVERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSS-APWIKVPYPFQWGTPIFR-ASHVFGMIGA 305 (543)
Q Consensus 228 ~~~lr~~aiLigivvG~i~a~~lg~~~~~~~~~~~~~~~~~vd~~~~v~~-a~~~~~P~~~~fg~P~f~-~~~i~~~~~~ 305 (543)
|+.+.-+++.+++++-+.+...++.. .+. . ....++...-.+ -.|+--|. ...|.+. ..++++.+.+
T Consensus 277 R~~isDf~v~iaI~~~~~~~~~~~~~--~~k-L-----~vp~~f~pt~~~~r~W~v~p~---~~~p~w~~~aA~~palll 345 (510)
T PF00955_consen 277 REIISDFGVPIAILIMTLVDYLFGVD--TPK-L-----NVPSSFKPTSPGKRGWFVNPF---GSLPWWAIFAAIIPALLL 345 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhHHhhHHHHHHHHHHHHHHHhccc--ccc-c-----CCCCCCCCCCCCCCCeecCcc---cCCCHHHHHHHHHHHHHH
Confidence 34455678999999888877665521 000 0 000012110111 34553331 1123332 3455556677
Q ss_pred HHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHh----------------h
Q 009103 306 ALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLG----------------L 369 (543)
Q Consensus 306 ~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~----------------~ 369 (543)
++.-++|+-=+..-+++. +.+-.+....+=.+..-|+-+.++|++|-...++...++.-.+. .
T Consensus 346 ~iL~F~DqnIts~ivn~~-e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe~~~i 424 (510)
T PF00955_consen 346 TILFFMDQNITSLIVNRP-ENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGEKPKI 424 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhHhHHHhCCh-hhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCCCCee
Confidence 777777765332222221 11222223455578889999999999997766554323322111 1
Q ss_pred hccC-cchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhhc
Q 009103 370 THIG-SRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQFA 428 (543)
Q Consensus 370 Tgv~-SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~~ 428 (543)
.++. .|.......+ ++|+..-+..++..||.||+.|+.+++ |.-...|.|.++++
T Consensus 425 ~~V~EqRvT~l~~~~---Ligls~~l~pvL~~IP~~VL~GvFlym-G~~sL~gnq~~~Ri 480 (510)
T PF00955_consen 425 VGVREQRVTGLLVHL---LIGLSLFLLPVLKLIPMPVLYGVFLYM-GVTSLSGNQFFERI 480 (510)
T ss_dssp --------------------------------------------------------TTTT
T ss_pred CeEEEecccHHHHHH---HHHHHHHHHHHHHHhhHHHHHHHHHhh-eeeeecCccHHHHH
Confidence 1222 2444444443 233444466689999999999999985 66666666666554
No 22
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=79.34 E-value=59 Score=36.78 Aligned_cols=120 Identities=12% Similarity=0.172 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHh--hhccC---
Q 009103 299 VFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLG--LTHIG--- 373 (543)
Q Consensus 299 i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~--~Tgv~--- 373 (543)
++.-+.++++.+=|+++ .+..+|-+ ...|+.+.=++.++.++||+.+..... ...+... ..-+.
T Consensus 25 l~AGltva~valP~ama----~a~~aGv~------p~~GLyas~i~~~v~alfGgs~~~i~G-Pt~a~~~v~a~~i~~~~ 93 (554)
T COG0659 25 LLAGLTVAAVALPLAMA----FAIAAGVP------PEAGLYASIVAGIIYALFGGSRGLISG-PTGAFAVVLAAVIASLV 93 (554)
T ss_pred HHHHHHHHHHHhHHHHH----HHHHcCCC------HHHHHHHHHHHHHHHHHHcCCccceec-cchhhHHHHHHHHHHHH
Confidence 34456667777777775 34455532 357899999999999999999876443 3222111 11222
Q ss_pred c------chHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhhccC
Q 009103 374 S------RRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQFANN 430 (543)
Q Consensus 374 S------R~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~~~~ 430 (543)
. -.+...+|++.+++|++ |++.++..||.||+-|.+--+--.|+...+..+...+.
T Consensus 94 ~~g~~~~~~~tllaGv~~i~~G~l-RLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~ 155 (554)
T COG0659 94 ETGLALAFLATLLAGVFQILLGLL-RLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLAS 155 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 1 12356889999999876 89999999999999998765545566666665554444
No 23
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=79.27 E-value=42 Score=36.32 Aligned_cols=140 Identities=11% Similarity=0.067 Sum_probs=81.1
Q ss_pred HHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHH
Q 009103 73 VPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSL 152 (543)
Q Consensus 73 a~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~ 152 (543)
.++.|-+.. +...+...|+++++-+.|| ..++..+ -+. .+++. +.+.+ ++ ...=.++.
T Consensus 247 l~aaGy~~p-----~~~~~~~tGl~sll~ApfG-g~~~nla----ait--aAic~--G~~ah-------~d-~~rR~~a~ 304 (395)
T TIGR00843 247 LKAAGYNAP-----AKPIIAAAGLAALFAAFAG-GISIGIA----AIT--AAICM--GKDAH-------ED-KDKRWIAA 304 (395)
T ss_pred HHHcCCCCC-----chHHHHHHHHHHHHHhccC-Cchhhhh----HHh--HHHhc--Ccccc-------cC-cCccchHH
Confidence 344555443 3677889999999999997 3333111 121 11221 11111 11 22334678
Q ss_pred HHHHHHHHHHhhh-hhHHHHhhhcCccchHHHHHHHHHHHHHhhhccc------cchhhhHHHHHHHHHHHHHHhhhhcc
Q 009103 153 IVSSFINIVLGYS-GAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLL------GNCVEIGLPMLVLLVICQQYLKRLHP 225 (543)
Q Consensus 153 lv~Gli~illg~~-gl~~~l~~~~Pp~V~G~~l~lIGl~l~~~~~~~~------~~~~~i~l~~l~l~i~l~~~~~~~~~ 225 (543)
+.+|++++++|++ +.+..+...+|+..+... -|+.|.+.-..++ .++-.-+++++++. ..++
T Consensus 305 i~~Gv~yll~glfag~i~~l~~~~P~~li~~l---aGlAll~~~~~~l~~a~~~~~~r~~a~~tflvt------aSg~-- 373 (395)
T TIGR00843 305 AAAGIFYLLAGLFAGAITALFAALPKELIAAL---AGLALLGAIAGNIKIALHEDQERDAALIAFLAT------ASGL-- 373 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH------HhcC--
Confidence 8999999999998 777888999998765532 3444443322111 12233344554432 2232
Q ss_pred cchhhhhhhHHHHHHHHHHHHHH
Q 009103 226 KAHFIVERFALLFCIGVVWAFAA 248 (543)
Q Consensus 226 ~~~~~lr~~aiLigivvG~i~a~ 248 (543)
.++...+-++|+++|.+..+
T Consensus 374 ---~~~gigaafWgl~~G~~~~~ 393 (395)
T TIGR00843 374 ---HFLGIGSAFWGLCAGGLAYF 393 (395)
T ss_pred ---CcccccHHHHHHHHHHHHHH
Confidence 24568899999999977654
No 24
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=78.98 E-value=27 Score=39.45 Aligned_cols=117 Identities=8% Similarity=0.118 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchh-hHHh-----hhcc
Q 009103 299 VFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENV-GLLG-----LTHI 372 (543)
Q Consensus 299 i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~-G~i~-----~Tgv 372 (543)
++.-+.++++.+-++++ .+..++-+ ..-|+.+.-+..++.++||+.+.......++ ..+. .-+.
T Consensus 18 i~aGltv~~~~iP~~~a----yA~laglp------p~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~ 87 (563)
T TIGR00815 18 LMAGLTVGILLIPQAMA----YAILAGLS------PIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGL 87 (563)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHcCCC------chhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcC
Confidence 34456777777777775 34455532 2457999999999999999998777652222 1111 1111
Q ss_pred Ccc----------hHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHh
Q 009103 373 GSR----------RVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQ 426 (543)
Q Consensus 373 ~SR----------~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~ 426 (543)
... ...+.+|++++++|++ +++.+...||.+|+.|.+.-+.-.++.+.++.+-
T Consensus 88 ~~~~~~~~~~~a~~l~~l~Gi~~~~~g~l-rlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~ 150 (563)
T TIGR00815 88 QYLFDCDAIRLAFTLTLLAGIFQVILGLL-RLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLL 150 (563)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 3457889999999976 7999999999999999877665556655555553
No 25
>PRK11660 putative transporter; Provisional
Probab=74.88 E-value=69 Score=36.26 Aligned_cols=115 Identities=10% Similarity=0.156 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHhhh-------c
Q 009103 299 VFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLGLT-------H 371 (543)
Q Consensus 299 i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~~T-------g 371 (543)
++.-+.+.++.+-|+++ .+..++.+. .-|+.+.-++.++.++||+.+..... ......... +
T Consensus 33 ~iAGltv~~~~iPq~ma----yA~lag~pp------~~GLysa~~~~~vyal~Gss~~~~~G-p~a~~~~~~~~~~~~~~ 101 (568)
T PRK11660 33 LIAGITVGIIAIPLAMA----LAIASGVPP------QYGLYTAAVAGIVIALTGGSRFSVSG-PTAAFVVILYPVSQQFG 101 (568)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHcCCCh------HHHHHHHHHHHHHHHHhcCCCCcccC-hhHHHHHHHHHHHHHhh
Confidence 44556777888888875 344555432 23799999999999999999887765 222211111 1
Q ss_pred cC-cchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhH
Q 009103 372 IG-SRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFI 425 (543)
Q Consensus 372 v~-SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l 425 (543)
.. .-.+.+.+|++.+++|++ +++.+...||.||+.|.+.-+--.++...++.+
T Consensus 102 ~~~~~~~~~l~Gii~~l~gll-rlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~ 155 (568)
T PRK11660 102 LAGLLVATLMSGIILILMGLA-RLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDF 155 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 112356889999999987 588999999999999987654334444444433
No 26
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=73.84 E-value=8.3 Score=32.30 Aligned_cols=59 Identities=24% Similarity=0.301 Sum_probs=46.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchh
Q 009103 46 PWPQALLLAFQHYIVMLGTTVLISSTLVPL--MGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAA 117 (543)
Q Consensus 46 p~~~~~~~GlQh~l~m~~~~i~vPiila~a--~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~ 117 (543)
.+++++++|+.-.+. .+|..++.+ +|+++ +..++++.++.++.++||.+.-++.||+.+
T Consensus 15 ~~~~D~~aGltva~~------~iPq~~a~A~lAg~pp-------~~GLy~a~~~~liyalfG~s~~~~~Gp~a~ 75 (84)
T PF13792_consen 15 NLRGDLLAGLTVALV------AIPQGMAYALLAGVPP-------IYGLYAAIIPPLIYALFGSSRHMIVGPTAA 75 (84)
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHcCCCC-------CeeeHHHHHHHHHHhhccCCCccccChHHH
Confidence 368899999986544 456665544 78897 588899999999999999888888998743
No 27
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=66.86 E-value=28 Score=37.23 Aligned_cols=115 Identities=21% Similarity=0.209 Sum_probs=74.8
Q ss_pred ccchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCc----chhhhchHHHHhhhcCCCCccccccchhhHHh
Q 009103 293 IFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSR----SIGLQGIGMLVEGIFGSVVGTTASVENVGLLG 368 (543)
Q Consensus 293 ~f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r----~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~ 368 (543)
+|+++.+..-+...++...-+..-+....+..+.. +++... -.++.|+.++.-++.==.|..+.. +--|..-
T Consensus 2 d~~~s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s---~~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AW-StPGaAl 77 (378)
T PF03594_consen 2 DFSLSAVSAGFVAVLVGYTGPVAIVLQAAQAAGAS---PAQIASWLFALYLGMGLTSILLSLRYRMPIVTAW-STPGAAL 77 (378)
T ss_pred CCcHHHHHHHHHHHHhhccchHHHHHHHHHHcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhc-chHHHHH
Confidence 45566666666666777766666555555555532 233333 345566677776666666766665 4444433
Q ss_pred hhccCcc-------hHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHH
Q 009103 369 LTHIGSR-------RVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYC 411 (543)
Q Consensus 369 ~Tgv~SR-------~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li 411 (543)
....... -+++.++++++++|+.+.|..++..||.++..+++-
T Consensus 78 L~~~~~~~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLA 127 (378)
T PF03594_consen 78 LATSLPGYSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLA 127 (378)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 3222211 145789999999999999999999999999888753
No 28
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=55.63 E-value=3.1e+02 Score=29.89 Aligned_cols=38 Identities=16% Similarity=0.054 Sum_probs=24.3
Q ss_pred HHhcCCCchhhHHHHHHHHHHHHHHHHHHHH----hcCCcce
Q 009103 73 VPLMGGGHGDKGRVIQSLLFMSGLNTLLQTL----FGTRLPT 110 (543)
Q Consensus 73 a~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~----~G~rlPi 110 (543)
.+..|++..+........++...++.++.+. +|.|..+
T Consensus 63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~ 104 (476)
T PLN00028 63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS 104 (476)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 3447898887766655555566667677653 6766444
No 29
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=50.29 E-value=3.9e+02 Score=29.48 Aligned_cols=63 Identities=16% Similarity=0.163 Sum_probs=30.5
Q ss_pred HHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccc---cccchhhHHhhhccCcch
Q 009103 310 SAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTT---ASVENVGLLGLTHIGSRR 376 (543)
Q Consensus 310 ~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt---~s~en~G~i~~Tgv~SR~ 376 (543)
..+.+|-..|.+. ++++ +..+...++-.-|+-+++.-.+|+..+.+ |+ ...+....+.-.+|+
T Consensus 242 ~~~ilGa~~a~a~--g~~~-~~~~~~~~~G~~g~~~~lil~l~~~ttN~~nlYs-a~ls~~~i~~~l~k~ 307 (442)
T COG1457 242 FMMILGAALAAAA--GNAD-SIADVMLGLGGFGLPAILILVLGTVTTNANNLYS-AGLSFANIIPKLSKV 307 (442)
T ss_pred HHHHHHHHHHHhc--CCCc-hHHHHHHhcccHHHHHHHHHHHHHHhcCcHHHHH-HHHHHHHhhhhhhhH
Confidence 3445565555433 3222 12223333333567777777777765443 34 445555555534443
No 30
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=47.82 E-value=3.3e+02 Score=29.84 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhh
Q 009103 86 VIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYS 165 (543)
Q Consensus 86 li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~ 165 (543)
-+.+++.+-|++|++-+++| ..|. .++.-=..++... +. ..+ -.+..+|++.+++|++
T Consensus 276 ~l~rgi~~dGi~s~laglfg-~~p~---tt~sqNvGvi~~T---gV------~SR---------~v~~~aa~ilillgl~ 333 (433)
T PRK11412 276 RYRRSFVATGFMTLITVPLA-VIPF---SPFVSSIGLLTQT---GD------YRR---------RSFIYGSVMCLLVALI 333 (433)
T ss_pred ccccchhhccHHHHHHHhcC-CCCC---Cchhhhhhhhhhc---CC------chh---------HHHHHHHHHHHHHHHH
Confidence 46789999999999999997 4554 2221111111111 10 011 1256788999999999
Q ss_pred hhHHHHhhhcCccchHHHH
Q 009103 166 GAWGNLARFFSPIVIVPFV 184 (543)
Q Consensus 166 gl~~~l~~~~Pp~V~G~~l 184 (543)
+.+..+...+|..|.|.+.
T Consensus 334 PK~~alia~IP~pVlGg~~ 352 (433)
T PRK11412 334 PALTRLFCSIPLPVSSAVM 352 (433)
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 8889999999977766554
No 31
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=47.56 E-value=3.9e+02 Score=28.71 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhh
Q 009103 86 VIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYS 165 (543)
Q Consensus 86 li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~ 165 (543)
=++..+.+-|+++++-+++| ..|.. ++.--. ......+.. . .-+.+++|++.++++++
T Consensus 254 ~~~~~l~~~Gi~~i~aglfG-~~p~t---~~~~~~---~~~~~tg~~----------s-----r~~~~~~~~~lil~~l~ 311 (406)
T TIGR03173 254 DLAGGLRADGLGSALGGLFN-TFPYT---SFSQNV---GLVQLTGVK----------S-----RYVVAAAGVILVLLGLF 311 (406)
T ss_pred hccchHHhccHHHHHHHHhC-CCCCc---chhhhH---HHHHHhCCC----------c-----hHhHHHHHHHHHHHHHH
Confidence 35788999999999999998 56642 221111 011111110 1 12247788888888888
Q ss_pred hhHHHHhhhcCccchHHH
Q 009103 166 GAWGNLARFFSPIVIVPF 183 (543)
Q Consensus 166 gl~~~l~~~~Pp~V~G~~ 183 (543)
+.+..+...+|..|.|.+
T Consensus 312 ~~~~~l~~~iP~~vlgg~ 329 (406)
T TIGR03173 312 PKLAALVASIPQPVLGGA 329 (406)
T ss_pred HHHHHHHHhCCHHHHHHH
Confidence 777999999998777763
No 32
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=46.42 E-value=2.4e+02 Score=30.60 Aligned_cols=76 Identities=22% Similarity=0.324 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhh
Q 009103 87 IQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSG 166 (543)
Q Consensus 87 i~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~g 166 (543)
++..+++-|+++++-+++| ..|.. + |..- ..+...-+ ...- -+...+|++.+++++++
T Consensus 271 ~~r~l~adGl~~i~aglfG-~~p~t---~--~sen-~g~~~~T~--------------~~sr-~~~~~~a~~~i~~~l~p 328 (415)
T TIGR00801 271 LHRGVLADGLATLLAGLFG-GFPNT---T--FAQN-IGVIALTR--------------VASR-WVIVGAAVILIALGFFP 328 (415)
T ss_pred ccchHHHhhHHHHHHHhcC-CCCCc---c--hhhh-heeeeecC--------------CCch-HHHHHHHHHHHHHHHHH
Confidence 5789999999999999998 46651 1 1110 00111000 0111 15678888999999987
Q ss_pred hHHHHhhhcCccchHHHH
Q 009103 167 AWGNLARFFSPIVIVPFV 184 (543)
Q Consensus 167 l~~~l~~~~Pp~V~G~~l 184 (543)
.+..+...+|..|.|...
T Consensus 329 k~~~l~~~iP~~vlgg~~ 346 (415)
T TIGR00801 329 KIAALITSIPSPVLGGAS 346 (415)
T ss_pred HHHHHHHhCCHHHHHHHH
Confidence 789999999977766544
No 33
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=43.78 E-value=3.5e+02 Score=28.92 Aligned_cols=96 Identities=23% Similarity=0.307 Sum_probs=54.5
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHH
Q 009103 71 TLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQG 150 (543)
Q Consensus 71 ila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~g 150 (543)
.+++..|.+.++ ..-+.+++.+-|++|++-+++|. .|.. .|.--.-.+... +. .+- -
T Consensus 254 a~~~~~~~~~~~-~~~~~r~l~~dg~~~~l~gl~G~-~~~t-----~~~en~g~i~~t-~v-----------~Sr----~ 310 (389)
T PF00860_consen 254 AVARIAGKDDPR-PPRIRRGLLADGLGTILAGLFGT-SPTT-----TYSENAGGIAAT-GV-----------ASR----R 310 (389)
T ss_dssp HHHHHHTS-TCC-CCCHHHHHHHHHHHHHHHHHHT----EE-----E-HHHHHHHHHH-TB-------------H----H
T ss_pred HHHHHhCCCCcc-chhhcccceeeeeeeeechhhcC-CCCc-----cccccchhhhhh-cc-----------ccc----e
Confidence 334445555442 33368999999999999999986 4542 122111111111 10 111 1
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhhhcCccc-hHHHHHHHHH
Q 009103 151 SLIVSSFINIVLGYSGAWGNLARFFSPIV-IVPFVCVVGL 189 (543)
Q Consensus 151 a~lv~Gli~illg~~gl~~~l~~~~Pp~V-~G~~l~lIGl 189 (543)
..+.++++.++++++..+..+...+|..| .|..+.+.|.
T Consensus 311 ~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~ 350 (389)
T PF00860_consen 311 VGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGM 350 (389)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 35778888899999888899999999777 5666666664
No 34
>COG4129 Predicted membrane protein [Function unknown]
Probab=37.67 E-value=3.9e+02 Score=28.28 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhh
Q 009103 88 QSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGA 167 (543)
Q Consensus 88 ~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl 167 (543)
-.|-++.+++.++-.++|+..| .|+.+.+++++-.+ ...+...+++-++|.++-.++-.+++.++|
T Consensus 14 lKt~ia~~La~~ia~~l~~~~~-----~~A~i~AV~~l~~t--------~~~s~~~~~~r~~g~~iG~~~a~l~~~l~g- 79 (332)
T COG4129 14 LKTGLAAGLALLIAHLLGLPQP-----AFAGISAVLCLSPT--------IKRSLKRALQRLLGNALGAILAVLFFLLFG- 79 (332)
T ss_pred HHHHHHHHHHHHHHHHhCCCch-----HHHHHHHhhcccCc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 3555778888888777876654 46656544443211 123344556666666655554444444333
Q ss_pred HHHHhhhcCccchHHHHHH
Q 009103 168 WGNLARFFSPIVIVPFVCV 186 (543)
Q Consensus 168 ~~~l~~~~Pp~V~G~~l~l 186 (543)
..|...|.++++
T Consensus 80 -------~~~~~~~v~~~i 91 (332)
T COG4129 80 -------QNPIAFGVVLLI 91 (332)
T ss_pred -------ccHHHHHHHHHH
Confidence 235555655543
No 35
>KOG4085 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.80 E-value=1.7e+02 Score=27.17 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=33.0
Q ss_pred ccCcchHHHHHHHHHHHHHHhhhHHHHHHhCCchhHHHHHHHHHHHHH
Q 009103 371 HIGSRRVVQISTAFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVA 418 (543)
Q Consensus 371 gv~SR~~~~~ag~~li~l~~~pk~~~ll~~IP~~Vlgg~li~~fg~i~ 418 (543)
+-.+|.+.+.++++.++.|++. .++.=|....++++.++-|.+.
T Consensus 29 r~l~rl~gilgaf~~~~fGvf~----~ITls~~c~vAgvlqm~agfiv 72 (175)
T KOG4085|consen 29 RWLCRLSGILGAFSCAIFGVFN----CITLSPLCIVAGVLQMMAGFIV 72 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh----HHhhhHHHHHHHHHHHHHHHHH
Confidence 3346778888999888888665 7777788888888776666554
No 36
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=29.74 E-value=9.5e+02 Score=29.04 Aligned_cols=187 Identities=9% Similarity=0.088 Sum_probs=105.9
Q ss_pred cchhHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCCCCCcchhhhchHHHHhhhcCCCCccccccchhhHHh-----
Q 009103 294 FRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSVVGTTASVENVGLLG----- 368 (543)
Q Consensus 294 f~~~~i~~~~~~~lv~~~eslg~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilsglfG~~~~tt~s~en~G~i~----- 368 (543)
|+...+.+.+.+++.++.-.+. -+...+++.+..-..+..+++++++.++=++||+=|-+-.. ..|=+.
T Consensus 367 ~~~q~laa~ifiyFA~L~PaIa----FG~ll~~~T~g~~gv~E~Llstai~Giifslf~GQPL~IlG--~TGPilvF~~~ 440 (900)
T TIGR00834 367 LNPQCLAAVIFIYFAALSPAIT----FGGLLGEKTRNMMGVSELLISTAVQGVLFALLAAQPLLVVG--FSGPLLVFEEA 440 (900)
T ss_pred hcchhHHHHHHHHHHHhhHHhh----HHHHHHHhhCCcchHHHHHHHHHHHHHHHhhhcCCceEEec--CcccHHHHHHH
Confidence 6677777777888887766553 33333333333456789999999999999999998765432 122111
Q ss_pred ---hhcc-------CcchHHHHHHHHHHHHHHhh--hHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhhc----cC--
Q 009103 369 ---LTHI-------GSRRVVQISTAFMIFFSIFG--KFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQFA----NN-- 430 (543)
Q Consensus 369 ---~Tgv-------~SR~~~~~ag~~li~l~~~p--k~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~~----~~-- 430 (543)
..+- ..-|+.+++++++++++.+- .+...++--...+.+...-++| +.-+++.+-+. +.
T Consensus 441 ly~~c~~~~~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~lIs~IF---I~eai~~L~~~f~~~~~~~ 517 (900)
T TIGR00834 441 FFSFCESNGLEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSFLISLIF---IYETFSKLIKIFQEHPLQV 517 (900)
T ss_pred HHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCccc
Confidence 0110 01356778888888877664 2333444445555554333222 23444444221 10
Q ss_pred --C-----------------------------------CcccchhhhhHHHhhhhh-hHhhhhccccCCCCCccccCccc
Q 009103 431 --N-----------------------------------SMRNIYILGLSLFLGISI-PQYFASKTTEDGHGPVRTGGGWF 472 (543)
Q Consensus 431 --~-----------------------------------~~rn~~Ivg~sl~~Gl~~-P~~~~~~~~~~~~~~~~~~~~~l 472 (543)
+ ...|....++-+.+|.-. .-++.++. .+..+
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk----------~s~yf 587 (900)
T TIGR00834 518 FYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTFFLAMFLRKFK----------NSRYF 587 (900)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhC----------CCCcC
Confidence 0 002334444444444422 33333321 11247
Q ss_pred cchhhHhccc-hhHHHHHHHHHHhhhcC
Q 009103 473 NDIWNTIFSS-PPTVAMIVGTVLDNTLD 499 (543)
Q Consensus 473 p~~l~~~l~~-gi~~g~l~aiiLn~~~~ 499 (543)
|..++.++++ |+.++.++-..++..++
T Consensus 588 ~~~vR~~isDfgv~iaI~~~t~v~~~~~ 615 (900)
T TIGR00834 588 PGKARRLIGDFGVPISILIMVLVDIFIG 615 (900)
T ss_pred CchhhhhhhhhhHHHHHHHHHHHHHHhc
Confidence 8889999877 78888888888888765
No 37
>TIGR00822 EII-Sor PTS system, mannose/fructose/sorbose family, IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man (PTS splinter group) family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine,N-acetylglucosamine, and other sugars. Other members of this family can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.
Probab=27.61 E-value=3.1e+02 Score=28.06 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=32.8
Q ss_pred hhHHHHHHhCCchhHHHHHHHHHHHHHHHHhHhHhhccCC
Q 009103 392 GKFGAFFASIPLPIFAAIYCVLLGIVAAVGITFIQFANNN 431 (543)
Q Consensus 392 pk~~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~~l~~~~~~ 431 (543)
+.+.+++..||.-++.|..+. -+++=+.|+-++-+.-++
T Consensus 164 ~~v~~il~~iP~~v~~Gl~va-ggmLPAvGfAmLl~~m~~ 202 (265)
T TIGR00822 164 SAVQAMLKAIPEVVTHGLQIA-GGIIVVVGYAMVLRMMFK 202 (265)
T ss_pred HHHHHHHHHCHHHHHHHHHHH-HhhHHHHHHHHHHHHHhh
Confidence 567889999999999998876 588889999988877775
No 38
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=25.03 E-value=46 Score=36.12 Aligned_cols=16 Identities=56% Similarity=1.184 Sum_probs=9.5
Q ss_pred CCCCCCCCCCCCCCCC
Q 009103 4 TAGHHPPPPPQAAPPS 19 (543)
Q Consensus 4 ~~~~~~~~~~~~~~~~ 19 (543)
++|-.|||||+++||.
T Consensus 231 s~~g~PPPPPP~PPp~ 246 (480)
T KOG2675|consen 231 SAPGAPPPPPPAPPPA 246 (480)
T ss_pred cCCCCCCCCCCCCCCc
Confidence 4566666666655554
No 39
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=23.71 E-value=72 Score=37.18 Aligned_cols=17 Identities=12% Similarity=0.149 Sum_probs=10.6
Q ss_pred cccccceecCC---CCChHH
Q 009103 33 QLQQLQYCIHS---NPPWPQ 49 (543)
Q Consensus 33 ~~~~~~y~~~~---~pp~~~ 49 (543)
.+.+..|+++- |.+|.+
T Consensus 614 LkpKK~~k~e~~Mrr~nW~k 633 (1102)
T KOG1924|consen 614 LKPKKVYKPEVPMRRFNWSK 633 (1102)
T ss_pred CCccccCCCCCccccCCccc
Confidence 45667777765 346764
No 40
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=23.45 E-value=1.1e+03 Score=26.48 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=66.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHhcCCcce---EeccchhhH
Q 009103 43 SNPPWPQALLLAFQHYIVMLGTTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPT---VMGPSAAFT 119 (543)
Q Consensus 43 ~~pp~~~~~~~GlQh~l~m~~~~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~G~rlPi---v~Gpsf~~i 119 (543)
++|+.+..+..+.-..+...+.....|++..+..|.++.....+..+.-+.+-+++++...+..|++. +..... ..
T Consensus 216 ~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~-~~ 294 (524)
T PF05977_consen 216 SSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASL-LF 294 (524)
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHH-HH
Confidence 34556655555555544443344456888777788887766666665555566666666655433322 111111 11
Q ss_pred HHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCccchHHHH
Q 009103 120 LPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFV 184 (543)
Q Consensus 120 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg~~gl~~~l~~~~Pp~V~G~~l 184 (543)
...... .+.. .....++.+.++.|......-. .....+.+..|+.+.|=+.
T Consensus 295 a~~~~~---lal~----------~~~~~~~~~l~l~G~~~~~~~~-~~~t~~Q~~~P~~~~GRv~ 345 (524)
T PF05977_consen 295 ALALLL---LALS----------PSFWLALIALFLAGAAWIIANS-SLNTLVQLSVPDWVRGRVF 345 (524)
T ss_pred HHHHHH---Hhcc----------hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHhHHH
Confidence 111111 1110 2233445566677766555432 2345667888887666554
No 41
>PRK11663 regulatory protein UhpC; Provisional
Probab=22.73 E-value=5.4e+02 Score=27.32 Aligned_cols=39 Identities=13% Similarity=0.286 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHh
Q 009103 65 TVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLF 104 (543)
Q Consensus 65 ~i~vPiila~a~Gl~~~~~~~li~~tl~~sGI~Tllq~~~ 104 (543)
....|.+..+ .|++..+...+.+...+..+++.++-+.+
T Consensus 43 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l 81 (434)
T PRK11663 43 NAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIV 81 (434)
T ss_pred HHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 3445666554 79998888777777777777777776653
No 42
>PRK10720 uracil transporter; Provisional
Probab=22.57 E-value=5.6e+02 Score=27.94 Aligned_cols=47 Identities=17% Similarity=0.124 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhh-H--HHHHHhCCchhHHHHHHHHHHHHHHHHhH
Q 009103 377 VVQISTAFMIFFSIFGK-F--GAFFASIPLPIFAAIYCVLLGIVAAVGIT 423 (543)
Q Consensus 377 ~~~~ag~~li~l~~~pk-~--~~ll~~IP~~Vlgg~li~~fg~i~~~Gi~ 423 (543)
...++|++.++++++.+ + ..+...+|..|+|.+...+-=.+.-.+++
T Consensus 92 av~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~ 141 (428)
T PRK10720 92 GFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAG 141 (428)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHh
Confidence 35788888888888753 2 25778999999888776543333334443
No 43
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=22.00 E-value=4.5e+02 Score=29.32 Aligned_cols=146 Identities=18% Similarity=0.203 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcceEeccchhhHHHHHHHHhhcCCCCCCCccchhhccHHHHHHHHHHHHHHHHHHh
Q 009103 84 GRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVLSIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLG 163 (543)
Q Consensus 84 ~~li~~tl~~sGI~Tllq~~~G~rlPiv~Gpsf~~i~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ga~lv~Gli~illg 163 (543)
...+++.+..=|+++++.+++|.. .|.+ ++.-- +. ..+.... .+-+. +=+++.+++++|
T Consensus 304 ~~~inRgi~~eGig~lL~gl~G~g----tG~T-t~~EN---ig-ll~vTKV--------gSRrv----vQ~aa~fmI~~~ 362 (510)
T KOG1292|consen 304 PSVLNRGIGWEGIGSLLAGLFGTG----TGST-TSVEN---IG-LLGVTKV--------GSRRV----VQIAAGFMIFFG 362 (510)
T ss_pred hhhhhhhhhhhhHHHHHHHhhCCC----ccce-eeccc---ee-eEeeeee--------eeeee----hhhhHHHHHHHH
Confidence 677899999999999999999854 1222 01100 00 0000000 01111 346788899999
Q ss_pred hhhhHHHHhhhcCccchHHHH-HHHHHHHHHhhhcccc-------chh-hhHHHHHHHHHHHHHHhhhhc---ccchhhh
Q 009103 164 YSGAWGNLARFFSPIVIVPFV-CVVGLGLFMRGFPLLG-------NCV-EIGLPMLVLLVICQQYLKRLH---PKAHFIV 231 (543)
Q Consensus 164 ~~gl~~~l~~~~Pp~V~G~~l-~lIGl~l~~~~~~~~~-------~~~-~i~l~~l~l~i~l~~~~~~~~---~~~~~~l 231 (543)
.++-++.+...||-.++|.+. ++.|+ ....+++++. .|. .+|+- ++.-+...+|.++.. +.+.+++
T Consensus 363 i~gKFgA~fAsIP~piv~~l~c~~~~m-v~avgLSnLQf~dlns~RNl~IlG~S-if~gLsip~yF~~~~~~v~Tg~~~~ 440 (510)
T KOG1292|consen 363 IFGKFGAFFASIPDPIVGGLLCILFGM-VGAVGLSNLQFVDLNSSRNLFILGFS-IFLGLSIPQYFEQYPGPVHTGNGWF 440 (510)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHH-HHHHhhhhheeeccccccchhhhhHH-HHHhccHHHHHHhCCCccccCcHHH
Confidence 988889999999955555443 22222 2223443321 122 33333 333333445665442 1122222
Q ss_pred hh-hHH--HHHHHHHHHHHHHHHh
Q 009103 232 ER-FAL--LFCIGVVWAFAAILTA 252 (543)
Q Consensus 232 r~-~ai--LigivvG~i~a~~lg~ 252 (543)
.. ..+ -..+.+|-++|.+++-
T Consensus 441 d~ilnvll~~~m~Vggi~A~~LDn 464 (510)
T KOG1292|consen 441 DDILNVLLSSRMLVGGILAFILDN 464 (510)
T ss_pred HHHHHHHhhHHHHHHHHHhhhccc
Confidence 21 233 3447778888888764
No 44
>PRK10739 putative antibiotic transporter; Provisional
Probab=20.96 E-value=3.2e+02 Score=26.59 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=24.0
Q ss_pred HHHHHHHhhhhhHHHHhhhcCcc-------chHHHHHHHHHHHHHhhhc
Q 009103 156 SFINIVLGYSGAWGNLARFFSPI-------VIVPFVCVVGLGLFMRGFP 197 (543)
Q Consensus 156 Gli~illg~~gl~~~l~~~~Pp~-------V~G~~l~lIGl~l~~~~~~ 197 (543)
.+..+.+-. -+++.|++.+. ++|.+++.||++.+-.|+.
T Consensus 147 ~~~~l~l~~---s~~i~~~LG~~g~~vi~RimGllLaaiavq~i~~Gi~ 192 (197)
T PRK10739 147 GGTFVILLQ---SSLFLRLLGEKGVNALERLMGLILVMLSTQMFLDGIR 192 (197)
T ss_pred HHHHHHHHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444433 36777777763 5777777777777665554
Done!