BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009109
(543 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 273/447 (61%), Gaps = 7/447 (1%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
+K R +NS KT+S ++R+ Q++++ M DL K + ++ E++
Sbjct: 7 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 66
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
+KEL W + E + T I SEPLGVVLVI WNYPF L++ P
Sbjct: 67 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 126
Query: 193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
LKPSE++ + LLA L+ Y+D + VV+G V ET+ LL++++D I+YT
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 186
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
GS VG+IVMAAAAKHLTPV LELGGKSP VD +L V RRI GK+M N+GQ C+
Sbjct: 187 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-NSGQTCVA 245
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DYI+ ++++ L+ LK+F+G++ +S+D RI+N HF R+ L+D KV+
Sbjct: 246 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 303
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
+GG D+ IAPTIL+DV S +M+EEIFGP++PIV V +E++ I + KPL
Sbjct: 304 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 361
Query: 433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
A Y FS++E++ K+ + S+GG+ ND IVH TV +LPFGGVG SGMG+YHGK SF+ F
Sbjct: 362 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 421
Query: 493 SHKKAVLYRSFNGDST--TRYPPYTAE 517
SH+++ L +S + RYPP A+
Sbjct: 422 SHRRSCLVKSLLNEEAHKARYPPSPAK 448
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/452 (41%), Positives = 268/452 (59%), Gaps = 7/452 (1%)
Query: 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFIS 127
K + +K R ++S +T+ ++R+ Q++++ + DL K + +
Sbjct: 19 KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 78
Query: 128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSL 187
E+ + +++L W E + + T I SEPLGVVLVI TWNYPF L++
Sbjct: 79 EVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTI 138
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWD 247
P LKPSE++ +SLLA ++ Y+D V+ G V ET+ LL++++D
Sbjct: 139 QPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFD 198
Query: 248 KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNG 307
ILYTGS VG+I+M AAAKHLTPV LELGGKSP VD +L V RRI GK+M N+G
Sbjct: 199 HILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFM-NSG 257
Query: 308 QACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDED 367
Q C+ DYI+ ++++ L+ LKEF+G++ +S+D RI++ HF R+ L++
Sbjct: 258 QTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQ 317
Query: 368 KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS 427
KV+ YGG D IAPTIL DV S +M+EEIFGP+LPIV V +E++ I
Sbjct: 318 KVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQ 373
Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487
+ KPLA Y FS ++++ K+ + S+GG+ ND IVH T+ SLPFGGVG SGMGSYHGK
Sbjct: 374 REKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKK 433
Query: 488 SFDAFSHKKAVLYRSFNGDS--TTRYPPYTAE 517
SF+ FSH+++ L R D RYPP A+
Sbjct: 434 SFETFSHRRSCLVRPLMNDEGLKVRYPPSPAK 465
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 225/453 (49%), Gaps = 16/453 (3%)
Query: 51 SATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXX 110
S + ++K M K SL + + +R T +R ++ +
Sbjct: 12 SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 111 XXXHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170
+DL KP ++EI AL L W P + PS ++ EP
Sbjct: 72 SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPY 131
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230
GV +I +NYP L+L P +KPSE P TS+++ K++ + V V
Sbjct: 132 GVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAV 191
Query: 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
++G E S LL +D I +TGSP VG++VM AAAKHLTPV+LELGGK P +V +L
Sbjct: 192 IQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADL 251
Query: 291 QVTTRRIIAGKWMANNGQACIGVDYI---ITTKD-FAPKLIDSLRNELKEFFGKNPMESK 346
T +++ GK++ N+GQ CI DY+ + KD +L++ ++ EL E
Sbjct: 252 DQTVNQLMFGKFI-NSGQTCIAPDYLYVHYSVKDALLERLVERVKTELPEI--------N 302
Query: 347 DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIF 406
++V RL SLL+ + +++ G Q D + ++ T++ V + +M EE+F
Sbjct: 303 STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELF 360
Query: 407 GPLLPIVTVEKIEDSFD-VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHT 465
GP+LP++ + + + D V K PKPLA Y F D + K + I +G N ++H
Sbjct: 361 GPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHA 420
Query: 466 TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
LPFGG+G SGMG YHG FS+ F+HKK+V
Sbjct: 421 FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 224/453 (49%), Gaps = 16/453 (3%)
Query: 51 SATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXX 110
S + ++K M K SL + + +R T +R ++ +
Sbjct: 12 SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 111 XXXHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170
+DL KP ++EI AL L W P + PS ++ EP
Sbjct: 72 SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPY 131
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230
GV +I +NYP L+L P +KPSE P TS+++ K++ + V V
Sbjct: 132 GVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAV 191
Query: 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
++G E S LL +D I +TGSP VG++VM AAAKHLTPV+LELGGK P +V +L
Sbjct: 192 IQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADL 251
Query: 291 QVTTRRIIAGKWMANNGQACIGVDYI---ITTKD-FAPKLIDSLRNELKEFFGKNPMESK 346
T +++ GK++ N+GQ I DY+ + KD +L++ ++ EL E
Sbjct: 252 DQTVNQLMFGKFI-NSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEI--------N 302
Query: 347 DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIF 406
++V RL SLL+ + +++ G Q D + ++ T++ V + +M EE+F
Sbjct: 303 STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELF 360
Query: 407 GPLLPIVTVEKIEDSFD-VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHT 465
GP+LP++ + + + D V K PKPLA Y F D + K + I +G N ++H
Sbjct: 361 GPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHA 420
Query: 466 TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
LPFGG+G SGMG YHG FS+ F+HKK+V
Sbjct: 421 FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 162/343 (47%), Gaps = 12/343 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
++ EPLGVV +I+ WNYP L+++ LKPSE+A T L ++ + +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ A+ ++ G E L DKI +TGS G +M AAA+ + PV LELGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 282 AVV-DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
VV D NL + + G AN GQ C +I ++ A +D L K
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGI-FANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRDE---KQLKIAPTILLDVP 395
+P+E L +V+ + ++ + K I+ GG+R + K + PTI+ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
I KEE+FGP+L + T + E + ++ L A S D + + F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
I N + T + LP+GG SG G GK+ + F + K V
Sbjct: 459 IWINCS--QPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 161/343 (46%), Gaps = 12/343 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
++ EPLGVV +I+ WNYP L+++ LKPSE+A T L ++ + +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ A+ ++ G E L DKI +TGS G +M AAA+ + PV L LGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 282 AVV-DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
VV D NL + + G AN GQ C +I ++ A +D L K
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGI-FANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRDE---KQLKIAPTILLDVP 395
+P+E L +V+ + ++ + K I+ GG+R + K + PTI+ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
I KEE+FGP+L + T + E + ++ L A S D + + F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
I N + T + LP+GG SG G GK+ + F + K V
Sbjct: 459 IWINCS--QPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 12/362 (3%)
Query: 150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAP 209
+KA SL + I+ EP+GVV +I+ WNYPFL++ LKPSE+A
Sbjct: 132 QKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELAS 191
Query: 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAA 266
T L ++ ++ + + +V G E A L DKI +TGS G +M AA
Sbjct: 192 VTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAA 251
Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
+ + PV LELGGKSP VV ++L + G + NGQ C +I + A +
Sbjct: 252 QLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFF-TNGQICSATSRLIVHESIAVEF 310
Query: 327 IDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK 385
+D L + +P+E L IV+ + ++ + + K + G R + LK
Sbjct: 311 VDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLK 370
Query: 386 ----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
+ PTI+ DV I +EE+FGP+L + T E++ ++ L + S+D
Sbjct: 371 KGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDL 430
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF-SHKKAVLY 500
+ + + + AG + N + P+GG+ SG G G++ + + S K+ Y
Sbjct: 431 ERCERLSKALQAGIVWIN--CAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVTRY 488
Query: 501 RS 502
S
Sbjct: 489 TS 490
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 11/389 (2%)
Query: 118 SKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
S PF+ + +I S + + + +KA +L + ++ +PLGVV +IS
Sbjct: 97 SGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGLIS 156
Query: 178 TWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVA 236
WNYP L++ LKPSE+A T ++ + + + ++ G
Sbjct: 157 PWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGP 216
Query: 237 ETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTT 294
+ A L DKI +TGS G VMA+AA+ + PV LELGGKSP VV +++
Sbjct: 217 DAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDVDIDKVV 276
Query: 295 RRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVN 353
I G + NGQ C ++ + A + +D L K +P E L +++
Sbjct: 277 EWTIFGCFW-TNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVIS 335
Query: 354 PFHFARLASLLDEDKVSDK-IVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPL 409
+ ++ + K I+YGG R E K I PTI+ D+ I KEE+FGP+
Sbjct: 336 KGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPV 395
Query: 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSS 469
L + T +++ + LAA FS+D + + + + G + N +
Sbjct: 396 LCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCS--QPCFVQ 453
Query: 470 LPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
P+GG+ SG G G++ + + K V
Sbjct: 454 APWGGIKRSGFGRELGEWGIQNYLNIKQV 482
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 166/357 (46%), Gaps = 11/357 (3%)
Query: 150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAP 209
+KA SL + ++ EP+GVV +I+ WNYP L++ LKPSE+A
Sbjct: 132 QKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELAS 191
Query: 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAA 266
T L ++ ++ + + ++ G E A L DK+ +TGS G +M AAA
Sbjct: 192 LTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAA 251
Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
+ + PV LELGGKSP VV ++L I G + NGQ C +I + A +
Sbjct: 252 QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFW-TNGQICSATSRLILHESIATEF 310
Query: 327 IDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRDE--- 381
++ + +K +P+E L +V+ + ++ + K I+ GG R E
Sbjct: 311 LNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLK 370
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
K I PTI+ DV + I +EE+FGP+L + T E++ D+ L A S+D
Sbjct: 371 KGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDL 430
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
+ + + AG + N + + P+GGV SG G G++ D + K V
Sbjct: 431 ERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQV 485
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 162/355 (45%), Gaps = 22/355 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGV I WNYPF+++ KPS + P T +LA++ E V
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
V VV+G AET +LL + K+ +TGS G+ VM +AK + V LELGGKSP ++
Sbjct: 214 LVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 285 DSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
L+ R G MAN GQ C + ++ P+ ++ + K +
Sbjct: 273 FKDCELENAVR----GALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGD 328
Query: 342 PM--ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQ---RDEKQLK----IAPTILL 392
P+ E++ I P L + K +++ GG+ + +LK ++P +L
Sbjct: 329 PLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLD 388
Query: 393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS 452
+ DD T +KEEIFGP++ ++ + E+ + LA+ F+ D N+
Sbjct: 389 NCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLE 448
Query: 453 AGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDS 507
AG N + +PFGG SG G +G+ + D +S K V+ + DS
Sbjct: 449 AGTCYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDS 501
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 10/341 (2%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYV 223
++ EP+GVV +I+ WN+PF+++ + LKPSE TS LA+L E +
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 224 DNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ VV G +L + D + +TGS RVG + AA+ + V LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN-ELKEFFGK 340
+V + +L I G + N GQ CI ++ + L + L + K FG
Sbjct: 277 QIVFADADLDAAADGIAYGVYH-NAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR--DEKQLKIAPTILLDVPDD 397
E + ++ H ++ S + S +++ GG+R E L APT+ V D
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPD 395
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+I +EEIFGP+L +T + +++ + + L+A +S + + + ++ I AG
Sbjct: 396 XSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
N I T LP GG +SG+G G++ FD +S K V
Sbjct: 456 INSVIDGT--PELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 169/342 (49%), Gaps = 19/342 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSA 227
EP+G+V I+ +N+P LS PS AP LAK++E+ +
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188
Query: 228 V-----RVVEGA--VAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
V ++ GA V ++ +K + I +TGS +VG ++ A + LELGG +
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVN 246
Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
P +V +L +I G ++ GQ CI V I+ + A K I+ N+ K
Sbjct: 247 PNIVLKDADLNKAVNALIKGSFIYA-GQVCISVGMILVDESIADKFIEMFVNKAKVLNVG 305
Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDD 397
NP++ K D+ +++ H A + E + + K++ GG+RD+ PTIL +V D
Sbjct: 306 NPLDEKTDVGPLISVEH-AEWVEKVVEKAIDEGGKLLLGGKRDKALF--YPTIL-EVDRD 361
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+ + K E F P++PI+ + E+ D+ S L + F++D +F +N+ GG+V
Sbjct: 362 NILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV 420
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
ND+ + ++PFGGV +SG+G K++ + S+ K ++
Sbjct: 421 INDSSLFRQ-DNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 152/339 (44%), Gaps = 11/339 (3%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNS 226
EP+GVV +I+ WNYP L++ LKPSE+A T LA + ++ + +
Sbjct: 167 EPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSG 226
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
+ +V G + A L DK+ +TGS G+ +MA+AA + PV LELGGKSP VV
Sbjct: 227 VLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTLELGGKSPIVV 286
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
+++ + G + NGQ C ++ A K + + K +P+E
Sbjct: 287 FDDVDIDKAVEWTLFGCFW-TNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLE 345
Query: 345 SK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRD---EKQLKIAPTILLDVPDDST 399
L +V+ + ++ + K I+ GG R EK I PTI+ D+
Sbjct: 346 EGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSME 405
Query: 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
I +EE+FGP+L + +++ ++ LA S D + + + I AG I N
Sbjct: 406 IWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVN 465
Query: 460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
+ P+GG SG G G+ D + K V
Sbjct: 466 CS--QPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQV 502
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 204/499 (40%), Gaps = 45/499 (9%)
Query: 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 19 CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79 NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 69 AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
+K +E P T+ +A L+ E V +V G A +
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
+ DK+ +TGS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 236 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
N GQ C +D + ++ K NP +SK + V+ F ++
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAFSHKKAV 498
G G++ A++ K V
Sbjct: 473 SGQELGEYGLQAYTEVKTV 491
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 164/349 (46%), Gaps = 13/349 (3%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLE 220
+ ++I+ EP+GVV I+ WNYP L + +KPSEI P T+ + +L+E
Sbjct: 162 TESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221
Query: 221 DY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
+ + ++ GA +E ++ ++ D + +TG G+ +M AA ++T + LELG
Sbjct: 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
GK+P ++ + ++ + + G + + GQ C I+ K +L + +K+
Sbjct: 282 GKNPNIIFDDADFELAVDQALNGGYF-HAGQVCSAGSRILVQNSIKDKFEQALIDRVKKI 340
Query: 338 FGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQR-DEKQLK----IAPTI 390
N ++ ++ +++ H ++ S +D K I GG+R D LK PT+
Sbjct: 341 KLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTV 400
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
+ + I++EE+FGP++ + E +++ + LA FS D +
Sbjct: 401 ITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANK 460
Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
+ G + ND H + P+GG +SG+G GK + + K +L
Sbjct: 461 LKLGTVWIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 204/499 (40%), Gaps = 45/499 (9%)
Query: 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 19 CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79 NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 69 AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
+K +E P T+ +A L+ E V +V G A +
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
+ DK+ +TGS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 236 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
N GQ C +D + ++ K NP +SK + V+ F ++
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAFSHKKAV 498
G G++ A++ K V
Sbjct: 473 SGRELGEYGLQAYTEVKTV 491
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 204/498 (40%), Gaps = 45/498 (9%)
Query: 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 14 NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 63
Query: 80 YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 64 FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 119
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 120 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 170
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
+K +E P T+ +A L+ E V +V G A + +
Sbjct: 171 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 230
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
DK+ +TGS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 231 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 290
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
N GQ C +D + ++ K NP +SK + V+ F ++
Sbjct: 291 -NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 349
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE+
Sbjct: 350 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 409
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
+ LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 410 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 467
Query: 481 GSYHGKFSFDAFSHKKAV 498
G G++ A++ K V
Sbjct: 468 GRELGEYGLQAYTEVKTV 485
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 203/499 (40%), Gaps = 45/499 (9%)
Query: 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 19 CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79 NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 69 AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
+K +E P T+ +A L+ E V +V G A +
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
+ DK+ + GS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 236 EDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
N GQ C +D + ++ K NP +SK + V+ F ++
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAFSHKKAV 498
G G++ A++ K V
Sbjct: 473 SGRELGEYGLQAYTEVKTV 491
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 205/498 (41%), Gaps = 45/498 (9%)
Query: 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 20 NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80 YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 70 FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
+K +E P T+ +A L+ E V +V G A + +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
DK+ +TGS +GR++ +AA + +L V L+LGGKSP ++ S ++ + +
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
N GQ+C +D + ++ K NP +SK + V+ F ++
Sbjct: 297 -NQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
+ LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAFSHKKAV 498
G G++ A++ K V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 201/493 (40%), Gaps = 45/493 (9%)
Query: 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 19 CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79 NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 69 AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
+K +E P T+ +A L+ E V +V G A +
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
+ DK+ +TGS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 236 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
N GQ C +D + ++ K NP +SK + V+ F ++
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAF 492
G G++ A+
Sbjct: 473 SGRELGEYGLQAY 485
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 11/339 (3%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNS 226
EP+GVV I WN P L+++ LKP+ P T++ LA++ + +
Sbjct: 145 EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEG 204
Query: 227 AVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
+ VV G + AL D +TGS VGR V AA+ L P LELGGKS A++
Sbjct: 205 VLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIIL 264
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME- 344
++L ++ M N GQ C+ I+ + +++ ++ N + P +
Sbjct: 265 EDVDLAAAIPMMVFSGVM-NAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323
Query: 345 SKDLSRIVNPFHFARLASLLDED-KVSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTI 400
+ + +++ R+ + + + ++V GG R E I PT+ DV + TI
Sbjct: 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTI 383
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
+EEIFGP+L I+ + ED+ + LA ++ D + Q I G N
Sbjct: 384 AQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGIN- 442
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
+ PFGG SG+G +G + F+ +K+VL
Sbjct: 443 --WYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 203/498 (40%), Gaps = 45/498 (9%)
Query: 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 20 NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80 YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 70 FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
+K +E P T+ +A L+ E V +V G A + +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
DK+ +TGS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
N GQ +D + ++ K NP +SK + V+ F ++
Sbjct: 297 -NQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
+ LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAFSHKKAV 498
G G++ A++ K V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 23/348 (6%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
++ E +GV +I+ WN+P + LKPSE P + +LA++ + V
Sbjct: 135 VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGV 194
Query: 224 DNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+V G A L + K +TGS G + AAK V LELGGKSP
Sbjct: 195 PKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKSP 254
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAP-KLIDSLRNELKEFFGK 340
+V ++++ + GK + N GQ C T+ P K+ D+ ELKE F +
Sbjct: 255 YIVLDDVDIK-EAAKATTGKVVNNTGQVCTA-----GTRVLVPNKIKDAFLAELKEQFSQ 308
Query: 341 ----NPME-SKDLSRIVNPFHFARLASLLDED-KVSDKIVYGG----QRDEKQLKIAPTI 390
NP E + I++ F ++ + +++ + ++ YGG + EK PTI
Sbjct: 309 VRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTI 368
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
++V + TI +EEIFGP+ ++T ++++ + LA Y D++ + ++
Sbjct: 369 FINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARS 428
Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
I AG + N+ LPFGG +SG+G G + + F K++
Sbjct: 429 IEAGTVEINEA---GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 203/498 (40%), Gaps = 45/498 (9%)
Query: 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 20 NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80 YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 70 FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
+K +E P T+ +A L+ E V +V G A + +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
DK+ +TGS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
N GQ +D + ++ K NP +SK + V+ F ++
Sbjct: 297 -NQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
+ LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAFSHKKAV 498
G G++ A++ K V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 158/348 (45%), Gaps = 26/348 (7%)
Query: 170 LGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
LGV I WN+PF L +KPSE P + AK++++ +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 229 RVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
+V G L K + TGS G +MA AAK++T V LELGGK+PA+V
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK 346
+L++ + I+ + + N+GQ C + + K + ++ L ++ NP E
Sbjct: 263 DADLELAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 347 DLSR--IVNPFHFARLASLLDEDKVSD------KIVYGGQRDE-KQLKIAPTILLDVPDD 397
D++ ++N R+ E KV+ ++ +GG+ E K PT+LLDV +
Sbjct: 322 DIAMGPLINAAALERV-----EQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQE 376
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+IM EE FGP+LP+V + +ED+ + L + ++ + + + ++ G+
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIK-----GLK 431
Query: 458 FNDTIVHTTVSSLPFG---GVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
F +T ++ G G +SG+G GK + + V +S
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 158/348 (45%), Gaps = 26/348 (7%)
Query: 170 LGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
LGV I WN+PF L +KPSE P + AK++++ +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 229 RVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
+V G L K + TGS G +MA AAK++T V LELGGK+PA+V
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMD 262
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK 346
+L++ + I+ + + N+GQ C + + K + ++ L ++ NP E
Sbjct: 263 DADLELAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 347 DLSR--IVNPFHFARLASLLDEDKVSD------KIVYGGQRDE-KQLKIAPTILLDVPDD 397
D++ ++N R+ E KV+ ++ +GG+ E K PT+LLDV +
Sbjct: 322 DIAMGPLINAAALERV-----EQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQE 376
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+IM EE FGP+LP+V + +ED+ + L + ++ + + + ++ G+
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIK-----GLK 431
Query: 458 FNDTIVHTTVSSLPFG---GVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
F +T ++ G G +SG+G GK + + V +S
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 166/400 (41%), Gaps = 28/400 (7%)
Query: 116 DLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----E 168
D KP +++ ++ M LK L+Y W KT P + S E
Sbjct: 108 DNGKPYIISYLVDLDMV-------LKCLRYYAGWADKYHGKT----IPIDGDYFSYTRHE 156
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
P+GV I WN+P L+ +K +E P T+ +A L+ E
Sbjct: 157 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 216
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVV 284
V V+ G A + + DK+ +TGS VG ++ AA K +L V LE+GGKSP ++
Sbjct: 217 VNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNII 276
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
S ++ + + N GQ C +D + ++ K NP +
Sbjct: 277 MSDADMDWAVEQAHFALFF-NQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFD 335
Query: 345 SK-DLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIM 401
S+ + V+ F ++ + K + GG ++ I PT+ D+ D TI
Sbjct: 336 SRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIA 395
Query: 402 KEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDT 461
KEEIFGP++ I+ + +E+ + LAA F+ D Q + AG + N
Sbjct: 396 KEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY 455
Query: 462 IVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
V S PFGG SG G G++ A++ K V R
Sbjct: 456 DVFGAQS--PFGGYKLSGSGRELGEYGLQAYTEVKTVTVR 493
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 200/492 (40%), Gaps = 45/492 (9%)
Query: 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
N+ FI N + + +FP ++ ++ C +E DV+KA +K R
Sbjct: 20 NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80 YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
+ R S+ R+ + +A++ D KP +++ ++ M
Sbjct: 70 FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
LK L+Y W KT P + S EP+GV I WN+P L+
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
+K +E P T+ +A L+ E V +V G A + +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
DK+ +TGS +GR++ +AA + +L V LELGGKSP ++ S ++ + +
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
N GQ +D + ++ K NP +SK + V+ F ++
Sbjct: 297 -NQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
++ K + GG ++ I PT+ DV D TI KEEIFGP++ I+ + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
+ LAA F+ D Q + AG + N V S PFGG SG
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAF 492
G G++ A+
Sbjct: 474 GRELGEYGLQAY 485
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 15/337 (4%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYV 223
+I +P+GV I+ WN+P + LKP+ P ++ LA+L + V
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
VV G+ L K+ +TGS +GR +M AK + V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-KEFFGK 340
+V +L +A K+ N GQ C+ + + + + L+ + K G
Sbjct: 261 FIVFDDADLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGD 319
Query: 341 NPMESKDLSRIVNPFHFARLAS-LLDEDKVSDKIVYGGQRDEKQLKI-APTILLDVPDDS 398
+ +++ A++ + D + ++V GG+ E+ PTIL+DVP ++
Sbjct: 320 GLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANA 379
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP---LAAYFFSDDEQMKKEFVQNISAGG 455
+ KEE FGPL P+ + +D DVI LAAYF++ D + + G
Sbjct: 380 KVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGI 436
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
+ N I+ V+ PFGG+ SG+G K+ + +
Sbjct: 437 VGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 15/340 (4%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
+I +P+GV I+ WN+P + ++P+++ P T+ L L E +
Sbjct: 164 VIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGI 223
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+++V G E A L K+ +TGS VGR++MA A + + LELGG +P
Sbjct: 224 PAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAP 283
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
+V +L + K+ N GQ C+ + I + K + L ++KE N
Sbjct: 284 FIVFDDADLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGN 342
Query: 342 PMESKDLSRIVNPFHFARLASLLD---EDKVSD--KIVYGGQRDEKQLKIAPTILLDVPD 396
E ++ P + + + ED VS K++ GG ++ L P IL V
Sbjct: 343 GTEP---GVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG-KELGGLFFEPGILTGVTS 398
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
D + KEE FGPL P+ + E+ LAAYF++++ + + G +
Sbjct: 399 DMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMV 458
Query: 457 VFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
N ++ V+ PFGGV +SG+G K+ + + K
Sbjct: 459 GHNTGLISNEVA--PFGGVKQSGLGREGSKYGIEEYLETK 496
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 15/337 (4%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYV 223
+I +P+GV I+ WN+P + LKP+ P ++ LA+L + V
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
VV G+ L K+ +TGS +GR +M AK + V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-KEFFGK 340
+V +L +A K+ N GQ C+ + + + + L+ + K G
Sbjct: 261 FIVFDDADLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGD 319
Query: 341 NPMESKDLSRIVNPFHFARLAS-LLDEDKVSDKIVYGGQRDEKQLKI-APTILLDVPDDS 398
+ +++ A++ + D + ++V GG+ E+ PTIL+DVP ++
Sbjct: 320 GLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANA 379
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP---LAAYFFSDDEQMKKEFVQNISAGG 455
+ KEE FGPL P+ + +D DVI LAAYF++ D + + G
Sbjct: 380 KVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGI 436
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
+ N I+ V+ PFGG+ SG+G K+ + +
Sbjct: 437 VGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 26/348 (7%)
Query: 170 LGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
LGV I WN+PF L +KPSE P + AK++++ +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 229 RVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
+V G L K + TGS G +MA AAK++T V LELGGK+PA+V
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK 346
+L++ + I+ + + N+GQ C + + K + ++ L ++ NP E
Sbjct: 263 DADLELAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 347 DLSR--IVNPFHFARLASLLDEDKVSD------KIVYGGQRDE-KQLKIAPTILLDVPDD 397
D++ ++N R+ E KV+ ++ GG+ E K PT+LLDV +
Sbjct: 322 DIAMGPLINAAALERV-----EQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQE 376
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+IM EE FGP+LP+V + +E++ + L + ++ + + + ++ G+
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIK-----GLK 431
Query: 458 FNDTIVHTTVSSLPFG---GVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
F +T ++ G G +SG+G GK + + V +S
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 153/341 (44%), Gaps = 14/341 (4%)
Query: 167 SEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDN 225
SEP+GV I WN+P L+ L +KP+E P T+ + L+ E
Sbjct: 157 SEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPP 216
Query: 226 SAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPA 282
V +V G A + D K+ +TGS VG+++ AA K +L V LELGGKSP
Sbjct: 217 GVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPC 276
Query: 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP 342
+V + +L G + + GQ CI + + + + K++ NP
Sbjct: 277 IVFADADLDNAVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 335
Query: 343 MESKDLSR--IVNPFHFARLASLLDEDKVSDKIVY--GGQRDEKQLKIAPTILLDVPDDS 398
+ + +S+ ++ + ++ L++ K + GG K I PT+ DV DD
Sbjct: 336 L-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDM 394
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
I KEEIFGP+ I+ + ++D + L+A F++D + +G +
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWV 454
Query: 459 NDTIVHTTVSS-LPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
N ++ VS+ PFGG SG G G++ F ++ K V
Sbjct: 455 N---CYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
P +V VIS WN+P LS +KPSEIAP + L L + V
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPLLXALNTVPELRDV 185
Query: 229 RV-VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST 287
+ VEG ET A L D + +TGS GR V AA+ P LELGGK PA+V +
Sbjct: 186 LIFVEGG-GETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLES 244
Query: 288 INLQVTTRRIIAGKWMANNGQACIGVD--YIITTK--DFAPKLID-----SLRNELKEFF 338
NL++ T I+ G + N GQ+C+ ++ Y+ +K +F +LI L L E
Sbjct: 245 ANLELATSAILWGA-VVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDG 303
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE--KQLKIAPTILLDVPD 396
P+ ++ + I+N +LD + I GG+ +E PT+ +V
Sbjct: 304 AIGPIIAEKQAGIIND-------HILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNH 356
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
+ EE FGP+ P+ +E++ + L+A F+ E + + ++AG I
Sbjct: 357 SXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAI 416
Query: 457 VFNDTIVHTTV-----SSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
ND + ++ F G+G GS G F K+A L ++
Sbjct: 417 SINDAALTAXXHEGEKNAFNFSGLG----GSRVGAAGLKRFLRKQAFLIKT 463
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 13/339 (3%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
PLGV + I WNYP ++ KPSE P + +A++L E +
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 228 VRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
V++G +T LL D K+ TGS GR V AAAA HL V +ELGGKSP +V
Sbjct: 210 FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME- 344
+++ + G + ++GQ C + K + +++L+ + +P++
Sbjct: 269 DDADIESAVGGAMLGNFY-SSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDY 327
Query: 345 SKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDE---KQLKIAPTILLDVPDDST 399
+ L +V+ ++ S +++ K I GG + + + PT+ DV DD T
Sbjct: 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMT 387
Query: 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
I +EEIFGP++ ++ + ++ + LA F+ D V + AG + N
Sbjct: 388 IAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWIN 447
Query: 460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
+ +PFGG +SG G + + + +S K V
Sbjct: 448 --TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 185/419 (44%), Gaps = 11/419 (2%)
Query: 87 SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
SY R + + +A++ K+++K +++ +SE+ T A +E L+
Sbjct: 60 SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
+ E + A + EP+G+VL IS +NYP L+ KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
+ LLA+ E + + G +E + Q + I +TGS +G +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A + P++LELGGK A+V +L++T + IIAG + +GQ C V ++ +
Sbjct: 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
A +L++ +R ++ NP + D++ +++ + L+++ + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
L I P + V D + EE FGP+LPI+ V +E++ ++ L A F++D
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
+ + G + N+ T + PF G +SG G K+S +A + K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 23/353 (6%)
Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY 222
A ++ +P+GV VI+ WN+P + +KP+E P ++ LA+L
Sbjct: 140 ALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199
Query: 223 VDNSAVRVV----------EGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPV 272
S V V G T L+ KI +TGS G+I++ AA + V
Sbjct: 200 GIPSGVYNVIPCSRKNAKEVGEAICTDPLV----SKISFTGSTTTGKILLHHAANSVKRV 255
Query: 273 ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332
+ELGG +P +V + N+ +A K+ N GQ C+ + + + + +
Sbjct: 256 SMELGGLAPFIVFDSANVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAE 314
Query: 333 ELKEFF--GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEKQLKI-A 387
+K+ G E ++N ++ ++ D VS +V GG+R +
Sbjct: 315 AMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN-DAVSKGATVVTGGKRHQLGKNFFE 373
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
PT+L +V D EE FGPL P++ + E++ + + LA YF+S D
Sbjct: 374 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 433
Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
+ + G + N+ ++ + PFGGV +SG+G K+ D + K V Y
Sbjct: 434 AEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 484
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGVV I WNYP ++L KPSE+ P T+ LA++ E V +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
V+ G+ E L + +KI +TG G+ VMA+A+ L V +ELGGKSP +
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 284 VDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+ +L + MAN +GQ C + + + + ++
Sbjct: 261 IFPDADLDRAADIAV----MANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLD 393
+P E+ + +V+ H + ++ K +++ GG+R K +APT+ D
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTD 376
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
DD TI++EEIFGP++ I+ + +++ LAA + D + + A
Sbjct: 377 CRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 436
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
GI + +T + + +P GG +SG+G +G + ++ K+V
Sbjct: 437 -GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGVV I WNYP ++L KPSE+ P T+ LA++ E V +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
V+ G+ E L + +KI +TG G+ VMA+A+ L V +ELGGKSP +
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 284 VDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+ +L + MAN +GQ C + + + + ++
Sbjct: 260 IFPDADLDRAADIAV----MANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLD 393
+P E+ + +V+ H + ++ K +++ GG+R K +APT+ D
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTD 375
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
DD TI++EEIFGP++ I+ + +++ LAA + D + + A
Sbjct: 376 CRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 435
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
GI + +T + + +P GG +SG+G +G + ++ K+V
Sbjct: 436 -GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 185/419 (44%), Gaps = 11/419 (2%)
Query: 87 SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
SY R + + +A++ K+++K +++ +SE+ T A +E L+
Sbjct: 60 SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
+ E + A + EP+G+VL IS +NYP L+ KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
+ LLA+ E + + G +E + Q + I ++GS +G +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A + P++LELGGK A+V +L++T + IIAG + +GQ C V ++ +
Sbjct: 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
A +L++ +R ++ NP + D++ +++ + L+++ + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
L I P + V D + EE FGP+LPI+ V +E++ ++ L A F++D
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
+ + G + N+ T + PF G +SG G K+S +A + K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 11/419 (2%)
Query: 87 SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
SY R + + +A++ K+++K +++ +SE+ T A +E L+
Sbjct: 60 SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
+ E + A + EP+G+VL IS +NYP L+ KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
+ LLA+ E + + G +E + Q + I +TGS +G +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A + P++L LGGK A+V +L++T + IIAG + +GQ C V ++ +
Sbjct: 239 GKMAG--MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
A +L++ +R ++ NP + D++ +++ + L+++ + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
L I P + V D + EE FGP+LPI+ V +E++ ++ L A F++D
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
+ + G + N+ T + PF G +SG G K+S +A + K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 154/351 (43%), Gaps = 21/351 (5%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
P GVV+ I+ WN+P L+ LKP++ P ++ L ++ E + +
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 228 VRVVEG---AVAETSALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
+ V+ G V +T L E K++ TGS G+ + +A+++TPV+LELGGK+P V
Sbjct: 208 LNVINGTGSVVGQT--LCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMV 265
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
V +L + G++ AN GQ C V+ + + + +K +PM
Sbjct: 266 VMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324
Query: 344 ES-KDLSRIVNPFHFARLASLLDED-KVSDKIVYGGQRD-----EKQLKIAPTILLDVPD 396
++ + N + ++ E K + GG+ E PT+L+DV
Sbjct: 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQ 384
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
D+ ++ EE FGP+LPIV V +E + + L+AY + + + ++ G +
Sbjct: 385 DNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEV 444
Query: 457 VFNDTI--VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNG 505
N + H + G +SG G GKF + + KK V G
Sbjct: 445 YINRGMGEQHQGFHN----GWKQSGFGGEDGKFGLEQYLEKKTVYINEAEG 491
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 24/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGVV I WNYP ++L KPSE+ P T+ LA++ E V +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
V+ G+ E L + +KI +TG G+ VMA+A+ L V +ELGGKSP +
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 284 V------DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
+ D ++ V +G+ N + I + F K+++ ++ +
Sbjct: 261 IFPDADLDRAADIAVMANFFSSGQVXTNGTRVFI---HRSQQARFEAKVLERVQ---RIR 314
Query: 338 FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTIL 391
G E+ + +V+ H + ++ K +++ GG+R K +APT+
Sbjct: 315 LGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVF 374
Query: 392 LDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI 451
D DD TI++EEIFGP++ I+ + +++ LAA + D + +
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 452 SAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
A GI + +T + + +P GG +SG+G +G + ++ K+V
Sbjct: 435 EA-GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 157/344 (45%), Gaps = 18/344 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGVV I WNYP ++L KPSE+ P T+ LA++ E V +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
V+ G+ E L + +KI +TG G+ VMA+A+ L V +ELGGKSP +
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD---FAPKLIDSLRNELKEFFGK 340
+ +L + + ++ A G I F K+++ ++ + G
Sbjct: 261 IFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQ---RIRLGD 317
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLDV 394
E+ + +V+ H + ++ K +++ GG+R K +APT+ D
Sbjct: 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDC 377
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
DD TI++EEIFGP++ I+ + +++ LAA + D + + A
Sbjct: 378 RDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA- 436
Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
GI + +T + + +P GG +SG+G +G + ++ K+V
Sbjct: 437 GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 148/358 (41%), Gaps = 14/358 (3%)
Query: 146 WTKPEKAKTSLTTYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXX 200
W E + + T P+ ++ EP+GV I+ WN+P +
Sbjct: 120 WFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPI 179
Query: 201 XLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG--AVAETSALLEQKWDKILYTGSPRV 257
+KP+E P ++ +A L E V + VV G T K+ +TGS V
Sbjct: 180 VVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAV 239
Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
GR++MA +A + + LELGG +P +V +L IA K+ NNGQ C+ +
Sbjct: 240 GRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYR-NNGQTCVCTNRFF 298
Query: 318 TTKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLAS-LLDEDKVSDKIVY 375
+ D L + + G+ L ++N ++ S + D ++
Sbjct: 299 VHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMT 358
Query: 376 GGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAA 434
GG+R PT+L V D + KEE FGPL P+ E+ + LAA
Sbjct: 359 GGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAA 418
Query: 435 YFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
Y +S D + + G + N ++ V+ PFGGV +SG+G + D +
Sbjct: 419 YLYSRDIGRVWRVAEALEYGMVGINTGLISNEVA--PFGGVKQSGLGREGSHYGIDDY 474
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGVV I WNYP ++L KPSE+ P T+ LA++ E V +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
V+ G+ E L + +KI +TG G+ VMA+A+ L V + LGGKSP +
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 284 VDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+ +L + MAN +GQ C + + + + ++
Sbjct: 260 IFPDADLDRAADIAV----MANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLD 393
+P E+ + +V+ H + ++ K +++ GG+R K +APT+ D
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTD 375
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
DD TI++EEIFGP++ I+ + +++ LAA + D + + A
Sbjct: 376 CRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 435
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
GI + +T + + +P GG +SG+G +G + ++ K+V
Sbjct: 436 -GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 179/457 (39%), Gaps = 22/457 (4%)
Query: 56 AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHK 115
E ++ + DV+KA +E + +T R I +A++
Sbjct: 50 CEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESI 109
Query: 116 DLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS----EPLG 171
+ K F S M C AL+ W K T P E S EP+G
Sbjct: 110 NAGK----VFASAYLMDLDYCIKALRYCAGWAD----KIQGRTIPVDGEFFSYTRHEPIG 161
Query: 172 VVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRV 230
V +I WN P +L +KP+E P T+ +A L+ E V +
Sbjct: 162 VCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNI 221
Query: 231 VEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDST 287
V G A + D K+ +TGS VG+++ AAAK +L V LELG K+P +V +
Sbjct: 222 VPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFAD 281
Query: 288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SK 346
+L G + N GQ+CI + + + + K++ NP+
Sbjct: 282 ADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGV 340
Query: 347 DLSRIVNPFHFARLASLLDEDKVSDKIVY--GGQRDEKQLKIAPTILLDVPDDSTIMKEE 404
+ +N ++ L++ K + GG K I PT+ +V DD I KEE
Sbjct: 341 NHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEE 400
Query: 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVH 464
IFGP+ I+ + +++ + L A F+ D + AG + N +
Sbjct: 401 IFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAA 460
Query: 465 TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
+ S P GG SG G G++ ++ K V +
Sbjct: 461 SAQS--PAGGFKMSGHGREMGEYGIHEYTEVKTVTMK 495
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 20/332 (6%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
P+GV + IS WN+ + + LKP+ P ++ ++LED +
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVG-RIVMAAAA-----KHLTPVILELGGK 279
+ V G+ AE L K I +TGS VG R+ AA HL VI+E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
VVD +L + I+ + +GQ C + KD ++++ K
Sbjct: 292 DTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350
Query: 340 KNPMESKD-LSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
+P + + +++ F ++ S ++ K +++ GG+ D I PTI+ D+ +
Sbjct: 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD----EQMKKEFVQNISA 453
+ IM+EEIFGP++ + + ++ + L + + EQ K+EF
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREF----HV 466
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
G + FN V PFGG SG S G
Sbjct: 467 GNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 152/353 (43%), Gaps = 23/353 (6%)
Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY 222
A ++ +P+GV VI+ WN+P + +KP+E P ++ LA+L
Sbjct: 140 ALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199
Query: 223 VDNSAVRVV----------EGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPV 272
S V V G T L+ KI +TGS G+I++ AA + V
Sbjct: 200 GIPSGVYNVIPCSRKNAKEVGEAICTDPLV----SKISFTGSTTTGKILLHHAANSVKRV 255
Query: 273 ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332
+ELGG +P +V + N+ +A K+ N GQ + + + + + +
Sbjct: 256 SMELGGLAPFIVFDSANVDQAVAGAMASKFR-NTGQTAVCSNQFLVQRGIHDAFVKAFAE 314
Query: 333 ELKEFF--GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEKQLKI-A 387
+K+ G E ++N ++ ++ D VS +V GG+R +
Sbjct: 315 AMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN-DAVSKGATVVTGGKRHQLGKNFFE 373
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
PT+L +V D EE FGPL P++ + E++ + + LA YF+S D
Sbjct: 374 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 433
Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
+ + G + N+ ++ + PFGGV +SG+G K+ D + K V Y
Sbjct: 434 AEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 484
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 11/419 (2%)
Query: 87 SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
SY R + + +A++ K+++K +++ +SE+ T A +E L+
Sbjct: 60 SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
+ E + A + EP+G+VL IS +NYP L+ KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
+ LLA+ E + + G +E + Q + I +TGS +G +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A + P++LELGGK A+V +L++T + IIAG + +GQ V ++ +
Sbjct: 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRSTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
A +L++ +R ++ NP + D++ +++ + L+++ + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
L I P + V D + EE FGP+LPI+ V +E++ ++ L A F++D
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
+ + G + N+ T + PF G +SG G K+S +A + K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 26/348 (7%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
P G V +I+ WN P +LS LKP+E +P T++ LA++L++ +
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGV 221
Query: 228 VRVVEGAVAET-SALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
+V+G E +AL+ +L TG G+IVM AA HL + ELGGKSPA+V
Sbjct: 222 FNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVF 281
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITT----KDFAPKLIDSLRNELKEFFGKN 341
+ +L+ ++ + + NG+ C ++ +DF K+++ R +
Sbjct: 282 ADADLERALDAVVF-QIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARA----IRVGH 336
Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLK---------IAPTI 390
P++ + ++ +++P H R+ ++ K +++ GG+R + + + PT+
Sbjct: 337 PLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTV 396
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
+ + I +EEIFGP+L + + E++ LAAY F+ D +
Sbjct: 397 FVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALE 455
Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
+ AG + N V + PFGGV SG G ++ D ++ K +
Sbjct: 456 LEAGMVYLNSHNVRHLPT--PFGGVKGSGDRREGGTYALDFYTDLKTI 501
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 12/328 (3%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
P GV +VI WN+ F + LKP+ AP ++ ++LE+ +
Sbjct: 172 PTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGV 231
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGGK 279
V V G+ AE L K I +TGS VG + AAK HL VI E+GGK
Sbjct: 232 VNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGK 291
Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQAC-IGVDYIITTKDFAPKLIDSLRNELKEFF 338
VVD ++++ + I + GQ C G ++ K + L + +
Sbjct: 292 DTVVVDEDCDIELAAQSIFTSAF-GFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKV 350
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDD 397
G+ + +++ F ++ ++ K ++V GG+ D+ K I PTI D+
Sbjct: 351 GEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFADLDPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+ +M+EEIFGP++ V +++ +V + L + + Q G +
Sbjct: 411 ARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHG 485
FN V PFGG SG S G
Sbjct: 471 FNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
EP+GV ++ WNYP ++ +KP+++ P T+ A+L L+ +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
V ++ G+ + L D KI +TGS VG+ +M + A ++ V LELGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + +L + ++ + N G+ CI + + + + + E+++ NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
E N H A L L++ + K +V GG Q PT+ DV D
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
I KEE FG PI+ + + D D + S+ LA+ F+ D K +V +
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
G VF +T T V++ PFGG +SG G G+ + + + K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 158/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
EP+GV ++ WNYP ++ +KP+++ P T+ A+L L+ +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
V ++ G+ + L D KI +TGS VG+ +M + A ++ V L+LGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + +L + ++ + N G+ CI + + + + + E+++ NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
E N H A L L++ + K +V GG Q PT+ DV D
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
I KEE FG PI+ + + D D + S+ LA+ F+ D K +V +
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
G VF +T T V++ PFGG +SG G G+ + + + K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 146/345 (42%), Gaps = 14/345 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
PLG +VI+ WN+P + KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 228 VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTP-------VILELGG 278
V + G E A L + + I +TGS VG + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K+ +VD T + + ++ + GQ C +I T+ +++ + +
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
E+ DL +V+ ++ S ++ K ++V GG+R E + IAPT+ +VP
Sbjct: 351 VGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+ I +EEIFGP+L ++ V+ ++ +V P L +S + + + G +
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF-DAFSHKKAVLYR 501
FN I V PFGG SG + G + F KAV R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 145/345 (42%), Gaps = 14/345 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
PLG +VI+ WN+P + KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 228 VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTP-------VILELGG 278
V + G E A L + + I +TGS VG + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K +VD T + + ++ + GQ C +I T+ +++ + +
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
E+ DL +V+ ++ S ++ K ++V GG+R E + IAPT+ +VP
Sbjct: 351 VGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+ I +EEIFGP+L ++ V+ ++ +V P L +S + + + G +
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF-DAFSHKKAVLYR 501
FN I V PFGG SG + G + F KAV R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 10/341 (2%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
EP+GV I WN+P L+ +KP+E P ++ + L+ E
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 227 AVRVVEGAVAETSALLEQKW--DKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
V ++ G A + DKI +TGS VG+++ AA + +L V LELGGKSP +
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + +L + G + N GQ C I + + + K +P
Sbjct: 276 IFADADLDYAVEQAHQGVFF-NQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPF 334
Query: 344 E-SKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTI 400
+ + + ++ + ++ L+ K+ GG+ K I PT+ +V DD I
Sbjct: 335 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 394
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
KEEIFGP+ I+ + +++ + + L A F++D + AG + N
Sbjct: 395 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN- 453
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
+ + PFGG SG G G+F +S K V +
Sbjct: 454 -CYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVK 493
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
EP+GV ++ WNYP ++ +KP+++ P T+ A+L L+ +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
V ++ G+ + L D KI +TGS VG+ +M + A ++ V L LGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + +L + ++ + N G+ CI + + + + + E+++ NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK-----IVYGGQRDEKQLKIAPTILLDVPDDS 398
E N H A L L++ + K + G Q PT+ DV D
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
I KEE FG PI+ + + D D + S+ LA+ F+ D K +V +
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
G VF +T T V++ PFGG +SG G G+ + + + K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 13/345 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVD 224
I +PLGVV I+ WNYP +++ LKPSEI P T+ LA+L +D
Sbjct: 155 IRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP 214
Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
V ++ G L K + TGS G +++ A + +ELGGK+P
Sbjct: 215 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPV 274
Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+V D+ I V R N GQ C I K L++ L +
Sbjct: 275 IVFDDADIEAVVEGVRTFG---YYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSG 331
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ-RDEKQLKIAPTILLDVPD 396
P ES +L + + H R+ ++E K + K++ GG+ R APT+L
Sbjct: 332 APDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQ 391
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
D I+++E+FGP++ + + E + LA+ ++ D + G
Sbjct: 392 DDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCT 451
Query: 457 VFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
N + VS +P GG SG G + + ++ + V+ +
Sbjct: 452 WVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
EP+GV ++ WNYP ++ +KP+++ P T+ A+L L+ +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
V ++ G+ + L D KI +TGS VG+ +M + A ++ V LELGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + +L + ++ + N G+ I + + + + + E+++ NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
E N H A L L++ + K +V GG Q PT+ DV D
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
I KEE FG PI+ + + D D + S+ LA+ F+ D K +V +
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
G VF +T T V++ PFGG +SG G G+ + + + K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
EP+GV ++ WNYP ++ +KP+++ P T+ A+L L+ +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
V ++ G+ + L D KI +TGS VG+ +M + A ++ V LELGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + +L + ++ + N G+ I + + + + + E+++ NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
E N H A L L++ + K +V GG Q PT+ DV D
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
I KEE FG PI+ + + D D + S+ LA+ F+ D K +V +
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
G VF +T T V++ PFGG +SG G G+ + + + K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 144/345 (41%), Gaps = 14/345 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
PLG +VI+ WN+P + KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 228 VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTP-------VILELGG 278
V + G E A L + + I +TGS VG + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K +VD T + + ++ + + I+T + P L L+ +
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSV 351
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
G E+ DL +V+ ++ S ++ K ++V GG+R E + IAPT+ +VP
Sbjct: 352 GPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
+ I +EEIFGP+L ++ V+ ++ +V P L +S + + + G +
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF-DAFSHKKAVLYR 501
FN I V PFGG SG + G + F KAV R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLA--KLLEDYVDN 225
EPLGVVL IS +NYP L+ KP AT L+ K++E D
Sbjct: 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKP-----ATQGSLSGIKMVEALADA 205
Query: 226 SA----VRVVEG-AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
A ++VV G L+E ++ ++ AK + PV+LELGGK
Sbjct: 206 GAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK-MIPVVLELGGKD 264
Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
PA+V +L++T +I++G + + +GQ C + + A +L+ +++ +++
Sbjct: 265 PAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
+P + D++ +++ A + L+D+ + + G + + L ++PT+L DV +
Sbjct: 324 SPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSPTLLDDVTPAMRV 382
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
EE FGP+LPI+ V+ ++ + L A F+ D +++ G + N
Sbjct: 383 AWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINA 442
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
PF GV +SG+G K S + + ++ +
Sbjct: 443 K-TERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
EP+GV ++ WNYP ++ +KP+++ P T+ A+L L+ +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
V ++ G+ + L D KI +TGS VG+ +M + A ++ V L LGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + +L + ++ + N G+ I + + + + + E+++ NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
E N H A L L++ + K +V GG Q PT+ DV D
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
I KEE FG PI+ + + D D + S+ LA+ F+ D K +V +
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
G VF +T T V++ PFGG +SG G G+ + + + K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 156/395 (39%), Gaps = 19/395 (4%)
Query: 129 ISMTKSSCKLALKELKYWTK--PEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLL 185
+S +K +L + Y+ PE K T L + +A + + GV+ WN+P
Sbjct: 80 LSESKEEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQ 139
Query: 186 SLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLE--DYVDNSAVRVVEGAVAETSALLE 243
+ LK + P +++L AK+++ + S + + + +
Sbjct: 140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIAD 199
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
+ + TGS R G V AA K+L ELGG +V + QV R ++
Sbjct: 200 PRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQVL-RNVLNDART 258
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
N+GQ C II K +++ L+N +P+E+ + P + +
Sbjct: 259 YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEA---DTTLPPXNSEKAKEK 315
Query: 364 LDEDKVSDKIVYGG-------QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE 416
L E +V + I G + D K PTIL D+ D+ + +E+FGP+ + VE
Sbjct: 316 L-EAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVE 374
Query: 417 KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG 476
+ + L + D K+ I G V N + T LPFGG+
Sbjct: 375 DDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWI--TSGELPFGGIK 432
Query: 477 ESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
+SG G AF ++ V+ + N + Y
Sbjct: 433 KSGYGRELSGLGLXAFVNEHLVIDVTKNNQAENLY 467
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 27/358 (7%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY---VD 224
EPLGVV I+ +NYP +++ +KPS P +++ K L D D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 225 NSAVRVVEGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKHLTPVILELGGKSPAV 283
A+ + G AE + + + + +TGS VG R+V K ++ELGG PA+
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
V +L + +I G + + GQ C + ++ + KL++ + L +P
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 344 E-SKDLSRIVNPFHFAR-LASLLDEDKVSDKIVYGGQRDEKQLKIAPT----ILLDVPDD 397
+ + D+ +++P +A++ D + +++ GG+R + PT L++ P D
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR------LGPTYVQPTLVEAPAD 384
Query: 398 S----TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
+ K E+F P+ V V+ ++ + ++ +P L A F D + V+ +
Sbjct: 385 RVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEV 444
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
G I ND H + PFGG +SG+ ++ +A + K +++ ++ G +Y
Sbjct: 445 GAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF-NYKGKGVWKY 500
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSA 227
+ +GVV +I+ WN+P LKPSEIAP ++ L A++L++ S
Sbjct: 160 DAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSG 219
Query: 228 V-RVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
V ++ G A + L D I +TGS R G+ + A+ L V LELGGK ++
Sbjct: 220 VFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANII 279
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN-ELKEFFGKNPM 343
+ ++ R + N+GQ+C ++ + K I + ++ K G
Sbjct: 280 FADADIDALQRGVR--HCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ 337
Query: 344 ESKDLSRIVNPFHFARLASLL----DEDKVSDKIVYGG----QRDEKQLKIAPTILLDVP 395
+ +V+ + ++ L+ DE +V GG E+ + PT+ DV
Sbjct: 338 TGNHIGPVVSKEQYDKIQDLIQSGIDEGAT---LVTGGTGLPMGMERGYYVRPTVFADVK 394
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
I +EEIFGP+L ++ +++ + L Y S D + + +G
Sbjct: 395 PHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGM 454
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
+ N H FGGV SG G + F KA+ Y
Sbjct: 455 VEVNG---HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 16/339 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
PLGV+L I WN+P L LK + + +A++L + + V
Sbjct: 126 PLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 229 RVVEGAVAE--TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
A E + + + + + TGS R G + A A L +LELGG P +V +
Sbjct: 186 YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ES 345
+L++ + +AG++ N GQ C I + A D +P+ E
Sbjct: 246 DADLELAVKAAVAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEE 304
Query: 346 KDLS-----RIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKI-APTILLDVPDDST 399
DL + + H AS+ + +++ GG++ + A T+L DV D T
Sbjct: 305 NDLGPXARFDLRDELHQQVQASVAE----GARLLLGGEKIAGEGNYYAATVLADVTPDXT 360
Query: 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
++E+FGP+ I + + + L+A F+ D+ + E + GG+ N
Sbjct: 361 AFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFIN 420
Query: 460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
+ + + FGGV +SG G F F + + V
Sbjct: 421 G--YSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 161/353 (45%), Gaps = 17/353 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYV---D 224
EPLGVV I+ +NYP +++ +KPS P +++ K L D D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 225 NSAVRVVEGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKHLTPVILELGGKSPAV 283
A+ + G AE + + + + +TGS VG R+V K ++ELGG PA+
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
V +L + +I G + + GQ C + ++ + KL++ + L +P
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 344 E-SKDLSRIVNPFHFAR-LASLLDEDKVSDKIVYGGQRDEKQLKIAPTIL---LDVPDDS 398
+ + D+ +++P +A++ D + +++ GG+R + PT++ D D
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY-VQPTLVEAPADRVKDM 389
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
+ K E+F P+ V V+ ++ + ++ +P L A F D + V+ + G I
Sbjct: 390 VLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYI 449
Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
ND H + PFGG +SG+ ++ +A + K +++ ++ G +Y
Sbjct: 450 NDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF-NYKGKGVWKY 500
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 16/333 (4%)
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLL-AKLLEDY-VDNSAV 228
GVV VIS WN+P LS+ +KP+ P T ++ A++ E+ V +
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 229 RVVEGAVAETS-ALLEQKWDKIL-YTGSPRVGRIV--MAAAAKHLTPVILELGGKSPAVV 284
V GA +E + K++ +TGS VGR V +A + V LELGG +P VV
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK----DFAPKLIDSLRNELKEFFGK 340
+ ++ + G ++ + GQ C+ ++ +I +F K +++++N G
Sbjct: 270 LADADIDAAAQAAAVGAFL-HQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT---GD 325
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
E + ++N + L ++ K V E +L + P + DV D I
Sbjct: 326 PSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEI 384
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
+EEIFGPL+ ++ + + ++ + L+A +S D +F I +G + ND
Sbjct: 385 AREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHIND 444
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
V+ + FGG SG+G ++G ++ + F+
Sbjct: 445 LTVNDEPHVM-FGGSKNSGLGRFNGDWAIEEFT 476
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 160/353 (45%), Gaps = 17/353 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYV---D 224
EPLGVV I+ +NYP +++ +KPS P +++ K L D D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 225 NSAVRVVEGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKHLTPVILELGGKSPAV 283
A+ + G AE + + + + +TGS VG R+V K ++ELGG PA+
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
V +L + +I G + + GQ C + ++ + KL++ + L +P
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 344 E-SKDLSRIVNPFHFAR-LASLLDEDKVSDKIVYGGQRDEKQLKIAPTIL---LDVPDDS 398
+ + D+ +++P +A++ D + +++ GG+R + PT + D D
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY-VQPTFVEAPADRVKDM 389
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
+ K E+F P+ V V+ ++ + ++ +P L A F D + V+ + G I
Sbjct: 390 VLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYI 449
Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
ND H + PFGG +SG+ ++ +A + K +++ ++ G +Y
Sbjct: 450 NDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF-NYKGKGVWKY 500
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 19/352 (5%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
P+GVV I+ +N+P ++ LKPSE P + L +L E +
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 228 VRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
VV GA + +LE K I + GS VG V +++L V G K+ +V +
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN 260
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-FGKNPMES 345
NL+ T I+ G + G+ C+ + + A + + L+ ++ + G +
Sbjct: 261 DANLEDTVTNIV-GAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDG 319
Query: 346 KDLSRIVNPFHFARLASLLDED-KVSDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMK 402
L ++ + R S +++ + ++V G+ + + + PTI +V + TI K
Sbjct: 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWK 379
Query: 403 EEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI 462
+EIF P+L ++ V+ ++++ ++ A F+ + + F +NI AG + N
Sbjct: 380 DEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN-LG 438
Query: 463 VHTTVSSLPFGGVGESGMGSYH--GKFSFDAFSHKKAVLYRSFNGDSTTRYP 512
V ++ PF G S G+ H GK S D ++ KK V T RYP
Sbjct: 439 VPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVV---------TARYP 481
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 11/339 (3%)
Query: 162 SAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLED 221
++ I +P+G+V I+ WNYP KPSE P T+ LA+L+ D
Sbjct: 154 TSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIAD 213
Query: 222 YVDNSAVRVVEGAVAET--SALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
+ V V+ G ET +AL+ K + TG G+ V+AAAAK + LELGG
Sbjct: 214 ILPEGVVNVITGR-GETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLELGG 272
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF- 337
K+P +V +L+ I + N GQ C I KL+ L + +
Sbjct: 273 KAPVIVYGDADLEAVVNGIRTFGYY-NAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIR 331
Query: 338 FGKNPMESKDLSRIVNPFHFARLASLLDE--DKVSDKIVYGGQR-DEKQLKIAPTILLDV 394
+ + ++ +++ R+AS ++ D+ +I GG+ ++ PT++
Sbjct: 332 YNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGA 391
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
+ I++ E+FGP++ + +D+ LA+ ++ D + G
Sbjct: 392 TQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAXRAASRLQYG 451
Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
N T + P GG+ +SG G ++ + ++
Sbjct: 452 CTWINTHFXLT--NEXPHGGIKQSGYGKDXSVYALEDYT 488
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 144/358 (40%), Gaps = 18/358 (5%)
Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXX 195
C + L T PEK K T + P+GV +I WN+P
Sbjct: 120 CAKHISALDSHTIPEKPKDCTWT------VHYRPVGVTGLIVPWNFPIGXIAKKLSAALA 173
Query: 196 XXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWD--KILYT 252
+KP+ P T + + + + V +V G + +L + D + +T
Sbjct: 174 AGCPSVIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFT 233
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
GS VGR ++ A+ + + LELGG +P +V +L+ +IA K+ GQ C+
Sbjct: 234 GSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRG-GGQTCVC 292
Query: 313 VDYIITTKDFAPKLIDSLRNEL-KEFFGKNPMESKDLSRIVNPFHFARLASLLDE--DKV 369
+ I + A L + K G + D+ ++N F ++ L + DK
Sbjct: 293 ANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKG 352
Query: 370 SDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS 427
+ +V G Q E L PT++ V + +EE FGPL+P E+ D
Sbjct: 353 A-SLVAGKQPAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGND 411
Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
LA+Y F+ D + + + G + +N T PFGG SG+G G
Sbjct: 412 TEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGXKASGIGREGG 467
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 151/334 (45%), Gaps = 10/334 (2%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPS-EIAPATSSLLAKLLEDY-VDNS 226
PLGV+ IS +N+P LS+ KP + A + +++AK E +
Sbjct: 143 PLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAG 202
Query: 227 AVRVVEGAVAETS-ALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
+ V+ V E +L +++ +TGS VGR + A + + LELGG +P V
Sbjct: 203 VLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAV 262
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-FGKNPM 343
S ++ I GK++ + GQ C+ ++ II +D + ++ +K+ +G
Sbjct: 263 LSDADVDRAVDAAIFGKFI-HQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLKIAPTILLDVPDDSTIMK 402
+ ++N + ++++ K ++ G+R L P + + ++S I +
Sbjct: 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVL--TPYVFVGADNNSKIAQ 379
Query: 403 EEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI 462
E+F P+ I+ +++ D+ L++ F+ D + ++F I +G ND
Sbjct: 380 TELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQS 439
Query: 463 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
V+ + ++ FGG SG+G + + + F+ K
Sbjct: 440 VNDS-PNIAFGGNKASGVGRFGNPWVVEEFTVTK 472
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 14/324 (4%)
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATS-SLLAKLLEDYVDNSAVR 229
GV + IS WN+P + L KP+E P + +A L E + SA+
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 230 VVEGAVAETSALLEQKWD--KILYTGSPRVGRIV---MAAAAKHLTPVILELGGKSPAVV 284
+V G A L D +++TGS V R + +AA + P+I E GG + +
Sbjct: 711 LVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIA 769
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
D+T + ++ + + GQ C + + +D A ++I+ + +E +P +
Sbjct: 770 DATALPEQVADDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSD 828
Query: 345 -SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKE 403
+ + +++ RL + + K ++ + G E +AP I ++ + E
Sbjct: 829 VATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELT--EAGQLTE 885
Query: 404 EIFGPLLPIVTV--EKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDT 461
E+FGP+L +V E +E I+ L S + + + + G I N
Sbjct: 886 EVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRN 945
Query: 462 IVHTTVSSLPFGGVGESGMGSYHG 485
++ V PFGG G SG G G
Sbjct: 946 MIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 136/348 (39%), Gaps = 14/348 (4%)
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVD 224
I +P+G+ I+ +N+P + LKPSE P+ LA+L +E +
Sbjct: 159 IRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLP 218
Query: 225 NSAVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
+ VV G A+L + + GS + R V AA + G K+ +
Sbjct: 219 AGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXI 278
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYII-TTKDFAPKLIDSLRNELKEF-FGKN 341
+ +L +I G + G+ C + + ++ A +LID L ++ G
Sbjct: 279 IXPDADLDQAANALI-GAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPY 337
Query: 342 PMESKDLSRIVNPFHFARLASLLDED-KVSDKIVYGG-----QRDEKQLKIAPTILLDVP 395
E D +V R+ SL+D + K+V G Q E I + DV
Sbjct: 338 TDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVT 397
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
D I K EIFGP+L +V E++ + ++ D ++F I+ G
Sbjct: 398 PDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGX 457
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSFDAFSHKKAVLYR 501
+ N + ++ FGG S G + HG S ++ K + R
Sbjct: 458 VGVN-VPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 21/332 (6%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSL-LAKLL 219
++A + +P GVV V +N+P L KPSE+ P + L L +
Sbjct: 131 ATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWI 190
Query: 220 EDYVDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVI-LELG 277
+ + + +V+G AL + D + +TGS R G ++ + ++ LE G
Sbjct: 191 QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXG 250
Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
G +P VV+ +L II ++ + GQ C ++ + D+L L
Sbjct: 251 GNNPLVVEEVADLDAAVYTIIQSAFI-SAGQRCTCARRLLVPQG---AWGDALLARLVAV 306
Query: 338 FGKNPMESKDLSRIVNPFHFARLASLLDED--KVSDKIVYGG--------QRDEKQLKIA 387
+ PF A ++ E K + ++ G Q + +
Sbjct: 307 --SATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAALLT 364
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
P I LDV + EE FGPLL ++ + + LAA SD + ++F
Sbjct: 365 PGI-LDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQF 423
Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ AG + +N + SS PFGG+G SG
Sbjct: 424 LVESRAGIVNWNKQLT-GAASSAPFGGIGASG 454
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 20/286 (6%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLK----PSEIAPATSSLLAKLLEDYVD 224
P+G+V +I+ +N+P + K S I+ A + ++AK+LED
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 225 NSAV--RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
A+ GA T+ +++ + + +TGS +VG+ V + +LELGG +
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+ D+ ++L V + A + GQ C + + ++++ L+ +
Sbjct: 277 IAFEDADLSLVVPSALFAA---VGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVG 333
Query: 341 NPMESKDLSRIVNPFHFARLASLL-----DEDKVSDKIVYGGQ-RDEKQLKIAPTILLDV 394
NP D + + P H + S+ + K +VYGG+ D + PTI+ +
Sbjct: 334 NPW---DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGL 390
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD 440
D++I E F P+L + + E+ F + L++ F+ D
Sbjct: 391 GHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD 436
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 143/342 (41%), Gaps = 21/342 (6%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
P+G+V +I+ +N+P + K + P TS + K++ + ++ + +
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 229 ------RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
GA T+ +++ D + +TGS VG++V + +LELGG +
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+V D+ +NL V + + + GQ C ++ + +++ + K+
Sbjct: 275 IVFEDADLNLVVPSAVFAS---VGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIG 331
Query: 341 NPMESKDLSRIVNPFHFAR-----LASLLDEDKVSDKIVYGGQ-RDEKQLKIAPTILLDV 394
+P D S + P H + LA++ + +V GG+ D + PTI+ +
Sbjct: 332 DPW---DPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGL 388
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD-EQMKKEFVQNISA 453
D+ I+ E F P+L ++ + E++F + L++ F+ D ++ + S
Sbjct: 389 AHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSD 448
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHK 495
GIV + FGG +G G G S+ + +
Sbjct: 449 CGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMRR 490
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 127/332 (38%), Gaps = 18/332 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSA 227
EP GV VI+ WN+P +S+ KPS I TS + L+E + +
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGI---TSIIGWHLVELFREAGL 721
Query: 228 VRVV------EGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKH-----LTPVILE 275
V G+V + I +TGS G RI+ AA H + +I E
Sbjct: 722 PEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISE 781
Query: 276 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
+GGK+ ++D +L ++ + GQ C +I K I+ L + K
Sbjct: 782 MGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840
Query: 336 EF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAP-TILLD 393
G + + + + + + + K ++Y + P TI+
Sbjct: 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGG 900
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
+ + I +EEIFGP+L ++ + + + + S L FS + + +
Sbjct: 901 IKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRV 960
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
G + N V PFGG SG+G+ G
Sbjct: 961 GNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
E GGK+ V S+ ++ + + GQ C + K P++ L E
Sbjct: 314 ECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEH 372
Query: 335 KEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
+P E S +++ FAR+ L+ + S I+ GGQ +E + P
Sbjct: 373 SRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPC 432
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
I+ IMKEEIFGP+L + +K ++ ++ S L F+ D+ + +E
Sbjct: 433 IIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQE 492
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + +AG ND + V PFGG SG
Sbjct: 493 ATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
E GGK+ V + +++ + + GQ C + P++ L E
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAF-EYGGQKCSACSRLYVPHSLWPQIKGRLLEEH 375
Query: 335 KEFFGKNPME--SKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
+P E S +++ FAR+ L+ + S I+ GG+ D+ + P
Sbjct: 376 SRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPC 435
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
I+ IMKEEIFGP+L + +K +++ ++ S L FS D+ + +E
Sbjct: 436 IVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQE 495
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + +AG ND + V PFGG SG
Sbjct: 496 ATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
E GGK+ V + +++ + + GQ C + P++ L E
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAF-EYGGQKCSACARLYVPHSLWPQIKGRLLEEH 375
Query: 335 KEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
+P E S +++ FAR+ L+ + S I+ GG+ D+ + P
Sbjct: 376 SRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPC 435
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
I+ IMKEEIFGP+L + +K +++ ++ S L FS D+ + +E
Sbjct: 436 IVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQE 495
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + +AG ND + V PFGG SG
Sbjct: 496 ATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
E GGK+ V + +++ + + GQ C + P++ L E
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAF-EYGGQKCSACLRLYVPHSLWPQIKGRLLEEH 375
Query: 335 KEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
+P E S +++ FAR+ L+ + S I+ GG+ D+ + P
Sbjct: 376 SRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPC 435
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
I+ IMKEEIFGP+L + +K +++ ++ S L FS D+ + +E
Sbjct: 436 IVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQE 495
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
+ + +AG ND + V PFGG SG
Sbjct: 496 ATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense
pdb|1GPE|B Chain B, Glucose Oxidase From Penicillium Amagasakiense
Length = 587
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 21/95 (22%)
Query: 261 VMAAAAKHLTPVILELGGKS-PAVVDST-----------INLQ------VTTRRIIAGKW 302
V+ AA ++P+ILE G +V+D IN+Q V++R AG
Sbjct: 289 VLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQTTTTVSSRASSAG-- 346
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
A GQA ++ T D+AP+ D L +L ++
Sbjct: 347 -AGQGQAVFFANFTETFGDYAPQARDLLNTKLDQW 380
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 245 KWDKILYTGSPRVGRIVMAAAAKHLT----PVILELGGKSPAVVDSTINLQVTTR--RII 298
KWD ++Y+ +P VG V+ + + P ++E G + ++ + T +
Sbjct: 18 KWD-LMYSQNPEVGNEVVPLSVADMEFKNPPELIE--GLKKYLDETVLGYTGPTEEYKKT 74
Query: 299 AGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331
KWM + Q I D+II T P + +++R
Sbjct: 75 VKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVR 107
>pdb|1EOK|A Chain A, Crystal Structure Of Endo-Beta-N-Acetylglucosaminidase F3
pdb|1EOM|A Chain A, Crystal Structure Of The Complex Of
Endo-beta-n-acetylglucosaminidase F3 With A Biantennary
Complex Octasaccharide
Length = 290
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 40 YLSLTSFSCRCSATMAAEEKQMQ---RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96
+L++ S + T A KQ+Q DV +M+ RNN+N + +SY +S+ Q
Sbjct: 162 FLNVISELTKYFGTTAPNNKQLQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANVSRTQ 221
Query: 97 SIAN 100
+ N
Sbjct: 222 LMMN 225
>pdb|2J7N|A Chain A, Structure Of The Rnai Polymerase From Neurospora Crassa
pdb|2J7N|B Chain B, Structure Of The Rnai Polymerase From Neurospora Crassa
pdb|2J7O|A Chain A, Structure Of The Rnai Polymerase From Neurospora Crassa
Length = 1022
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 429 PKPLAAYFFSD---DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY 483
P + A+ ++ D++ K++V + G + D V+ + F G+G +G G Y
Sbjct: 965 PALMTAFMYAGLMPDKKFTKQYVARLEGDGSEYPDPEVYEVLGDDDFDGIGFTGNGDY 1022
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 117/302 (38%), Gaps = 65/302 (21%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLE 220
S+ ++S GV L I+ +N+P + +KP A AT+ L +++
Sbjct: 143 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVA 199
Query: 221 DYVDN-----SAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVI 273
D VD A+ ++ G+ ++ LL+Q +D + +TGS AA P
Sbjct: 200 DVVDAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSADT------AATLRAHPAF 250
Query: 274 LELGGKSPAVVDS-------------TINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
++ G + DS T + + ++ + +GQ C + +
Sbjct: 251 VQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVR-EMTVKSGQKCTAIRRAFVPE 309
Query: 321 DFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIV-YGGQR 379
++++L+ +L + NP R+ SL+ ++ + + R
Sbjct: 310 AALEPVLEALKAKLAKITVGNPRNDA-----------VRMGSLVSREQYENVLAGIAALR 358
Query: 380 DEKQLK------------------IAPTI-LLDVPDDSTIMKE-EIFGPLLPIVTVEKIE 419
+E L +AP + +++ PD++T++ + E+FGP+ +
Sbjct: 359 EEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTT 418
Query: 420 DS 421
D+
Sbjct: 419 DT 420
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 115/293 (39%), Gaps = 65/293 (22%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLE 220
S+ ++S GV L I+ +N+P + +KP A AT+ L +++
Sbjct: 143 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVA 199
Query: 221 DYVDN-----SAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVI 273
D VD A+ ++ G+ ++ LL+Q +D + +TGS AA P
Sbjct: 200 DVVDAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSADT------AATLRAHPAF 250
Query: 274 LELGGKSPAVVDS-------------TINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
++ G + DS T + + ++ + +GQ C + +
Sbjct: 251 VQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVR-EMTVKSGQKCTAIRRAFVPE 309
Query: 321 DFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIV-YGGQR 379
++++L+ +L + NP R+ SL+ ++ + + R
Sbjct: 310 AALEPVLEALKAKLAKITVGNPRNDA-----------VRMGSLVSREQYENVLAGIAALR 358
Query: 380 DEKQLK------------------IAPTI-LLDVPDDSTIMKE-EIFGPLLPI 412
+E L +AP + +++ PD++T++ + E+FGP+ +
Sbjct: 359 EEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 115/293 (39%), Gaps = 65/293 (22%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLE 220
S+ ++S GV L I+ +N+P + +KP A AT+ L +++
Sbjct: 141 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVA 197
Query: 221 DYVDN-----SAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVI 273
D VD A+ ++ G+ ++ LL+Q +D + +TGS AA P
Sbjct: 198 DVVDAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSADT------AATLRAHPAF 248
Query: 274 LELGGKSPAVVDS-------------TINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
++ G + DS T + + ++ + +GQ C + +
Sbjct: 249 VQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVR-EMTVKSGQKCTAIRRAFVPE 307
Query: 321 DFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIV-YGGQR 379
++++L+ +L + NP R+ SL+ ++ + + R
Sbjct: 308 AALEPVLEALKAKLAKITVGNPRNDA-----------VRMGSLVSREQYENVLAGIAALR 356
Query: 380 DEKQLK------------------IAPTI-LLDVPDDSTIMKE-EIFGPLLPI 412
+E L +AP + +++ PD++T++ + E+FGP+ +
Sbjct: 357 EEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 409
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,098,045
Number of Sequences: 62578
Number of extensions: 595703
Number of successful extensions: 1803
Number of sequences better than 100.0: 101
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1452
Number of HSP's gapped (non-prelim): 103
length of query: 543
length of database: 14,973,337
effective HSP length: 104
effective length of query: 439
effective length of database: 8,465,225
effective search space: 3716233775
effective search space used: 3716233775
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)