Query 009109
Match_columns 543
No_of_seqs 332 out of 1942
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 19:01:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 7E-108 2E-112 869.7 49.2 467 19-502 6-483 (490)
2 3iwj_A Putative aminoaldehyde 100.0 5E-103 2E-107 837.8 51.0 470 19-502 7-489 (503)
3 4f3x_A Putative aldehyde dehyd 100.0 5E-103 2E-107 835.7 46.7 478 6-501 13-496 (498)
4 3rh9_A Succinate-semialdehyde 100.0 9E-103 3E-107 834.5 47.6 467 18-502 10-484 (506)
5 3ifg_A Succinate-semialdehyde 100.0 6E-103 2E-107 833.1 45.2 465 19-500 12-482 (484)
6 3ed6_A Betaine aldehyde dehydr 100.0 3E-102 9E-107 833.5 49.1 467 19-502 32-510 (520)
7 3ek1_A Aldehyde dehydrogenase; 100.0 1E-102 4E-107 833.1 43.9 466 19-502 32-502 (504)
8 3u4j_A NAD-dependent aldehyde 100.0 7E-102 2E-106 831.6 49.4 468 18-502 21-498 (528)
9 3i44_A Aldehyde dehydrogenase; 100.0 1E-101 4E-106 825.0 49.8 465 15-499 21-495 (497)
10 2o2p_A Formyltetrahydrofolate 100.0 5E-102 2E-106 830.6 46.0 468 20-501 37-516 (517)
11 3r31_A BADH, betaine aldehyde 100.0 4E-102 1E-106 831.4 44.0 468 16-503 11-489 (517)
12 3k2w_A Betaine-aldehyde dehydr 100.0 6E-102 2E-106 828.5 45.2 468 18-502 11-488 (497)
13 3qan_A 1-pyrroline-5-carboxyla 100.0 1E-101 5E-106 831.1 48.0 468 18-502 36-516 (538)
14 3prl_A NADP-dependent glyceral 100.0 1E-101 4E-106 826.4 47.1 466 19-502 11-483 (505)
15 4e4g_A Methylmalonate-semialde 100.0 1E-101 3E-106 829.1 46.7 476 7-502 18-505 (521)
16 1wnd_A Putative betaine aldehy 100.0 2E-101 6E-106 823.0 48.3 465 20-501 24-494 (495)
17 1a4s_A ALDH, betaine aldehyde 100.0 3E-101 1E-105 823.6 49.3 466 19-502 19-496 (503)
18 1o04_A Aldehyde dehydrogenase, 100.0 8E-102 3E-106 826.8 44.5 465 20-501 20-494 (500)
19 1bxs_A Aldehyde dehydrogenase; 100.0 2E-101 8E-106 823.4 47.2 465 20-501 21-495 (501)
20 3b4w_A Aldehyde dehydrogenase; 100.0 2E-101 5E-106 824.3 44.3 464 20-501 9-481 (495)
21 2imp_A Lactaldehyde dehydrogen 100.0 7E-101 3E-105 818.0 48.2 466 19-501 6-478 (479)
22 3sza_A Aldehyde dehydrogenase, 100.0 1E-100 4E-105 812.0 49.7 451 64-520 15-468 (469)
23 3jz4_A Succinate-semialdehyde 100.0 9E-101 3E-105 817.6 48.3 466 19-501 9-480 (481)
24 2d4e_A 5-carboxymethyl-2-hydro 100.0 1E-100 3E-105 822.0 47.9 466 19-502 26-505 (515)
25 2j6l_A Aldehyde dehydrogenase 100.0 4E-100 1E-104 815.5 47.8 478 4-501 10-498 (500)
26 3pqa_A Lactaldehyde dehydrogen 100.0 3E-100 1E-104 811.9 45.3 454 22-502 2-464 (486)
27 3r64_A NAD dependent benzaldeh 100.0 6E-100 2E-104 815.4 47.6 465 20-502 13-485 (508)
28 2ve5_A BADH, betaine aldehyde 100.0 9E-100 3E-104 812.6 48.3 467 19-502 6-483 (490)
29 3ros_A NAD-dependent aldehyde 100.0 8E-100 3E-104 808.1 47.0 457 46-512 6-468 (484)
30 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.6E-99 6E-104 813.4 49.6 467 19-501 37-515 (516)
31 2w8n_A Succinate-semialdehyde 100.0 8E-100 3E-104 810.2 44.0 463 20-501 13-485 (487)
32 4dng_A Uncharacterized aldehyd 100.0 1.7E-99 6E-104 809.3 46.4 467 19-502 6-478 (485)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 8E-100 3E-104 812.1 43.8 472 19-511 18-500 (501)
34 3ty7_A Putative aldehyde dehyd 100.0 1.5E-99 5E-104 808.3 41.5 461 18-500 6-475 (478)
35 1euh_A NADP dependent non phos 100.0 4.3E-99 1E-103 803.6 44.5 458 21-501 6-473 (475)
36 1t90_A MMSDH, probable methylm 100.0 1.3E-98 4E-103 801.4 44.7 466 20-502 6-480 (486)
37 3lns_A Benzaldehyde dehydrogen 100.0 1.6E-97 5E-102 787.9 49.3 448 46-501 8-456 (457)
38 4h7n_A Aldehyde dehydrogenase; 100.0 1.8E-97 6E-102 791.0 45.2 459 46-511 8-472 (474)
39 3etf_A Putative succinate-semi 100.0 5.7E-97 2E-101 785.9 47.6 449 45-502 8-461 (462)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 3E-97 1E-101 798.6 44.8 477 18-512 62-560 (563)
41 3ju8_A Succinylglutamic semial 100.0 5.7E-94 2E-98 766.4 51.1 458 20-502 6-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 2.1E-94 7.3E-99 816.3 46.5 468 18-502 530-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 9.5E-94 3.3E-98 772.4 40.2 466 20-502 8-519 (534)
44 3v4c_A Aldehyde dehydrogenase 100.0 1.5E-91 5E-96 754.5 41.8 467 7-499 18-515 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 2.2E-88 7.4E-93 726.8 40.9 445 32-499 3-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 1.2E-87 4.1E-92 759.6 46.1 434 62-502 545-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 2.4E-82 8.1E-87 670.4 23.8 417 47-519 10-447 (463)
48 1vlu_A Gamma-glutamyl phosphat 100.0 4.8E-81 1.6E-85 661.3 24.3 405 68-516 15-449 (468)
49 3k9d_A LMO1179 protein, aldehy 100.0 4.4E-79 1.5E-83 647.9 31.9 412 62-501 7-448 (464)
50 4ghk_A Gamma-glutamyl phosphat 100.0 9.2E-77 3.2E-81 626.2 31.1 389 66-502 25-439 (444)
51 3my7_A Alcohol dehydrogenase/a 100.0 1.7E-76 5.9E-81 626.0 31.5 405 62-502 2-444 (452)
52 1o20_A Gamma-glutamyl phosphat 100.0 1.6E-76 5.4E-81 621.5 27.1 389 64-502 11-422 (427)
53 4gic_A HDH, histidinol dehydro 97.4 0.12 4E-06 52.3 26.5 258 159-499 119-400 (423)
54 1kae_A HDH, histidinol dehydro 96.3 1.1 3.8E-05 45.3 26.7 281 135-499 87-393 (434)
55 3v42_A Folliculin; tumor suppr 47.4 21 0.00073 32.8 4.9 66 187-257 21-86 (226)
56 1b93_A Protein (methylglyoxal 45.0 36 0.0012 29.2 5.7 114 171-307 12-135 (152)
57 1s7i_A Hypothetical protein PA 43.0 39 0.0013 27.8 5.5 70 357-431 32-108 (124)
58 2fiu_A Conserved hypothetical 37.7 53 0.0018 25.7 5.3 22 409-430 55-76 (99)
59 2xw6_A MGS, methylglyoxal synt 37.6 17 0.00056 30.6 2.3 79 190-275 24-111 (134)
60 3fgh_A Transcription factor A, 34.3 88 0.003 22.1 5.7 36 75-110 29-64 (67)
61 2yvq_A Carbamoyl-phosphate syn 33.2 53 0.0018 27.7 5.0 60 217-276 61-132 (143)
62 2co9_A Thymus high mobility gr 29.3 1.7E+02 0.0057 22.8 7.0 44 76-119 49-92 (102)
63 1vmd_A MGS, methylglyoxal synt 28.7 44 0.0015 29.4 3.7 121 164-307 20-151 (178)
64 3v4g_A Arginine repressor; vib 28.4 2.8E+02 0.0096 24.3 8.8 37 195-234 115-152 (180)
65 2eqz_A High mobility group pro 26.2 1.3E+02 0.0044 22.6 5.6 36 75-110 48-83 (86)
66 3lo3_A Uncharacterized conserv 24.2 2.3E+02 0.0079 21.6 6.9 23 408-430 53-75 (94)
67 1v63_A Nucleolar transcription 23.7 1.5E+02 0.0052 23.1 5.8 39 76-114 38-76 (101)
68 1use_A VAsp, vasodilator-stimu 23.4 87 0.003 20.7 3.4 27 92-118 14-40 (45)
69 2ioj_A Hypothetical protein AF 23.2 49 0.0017 27.5 2.9 47 226-272 53-101 (139)
70 2ec4_A FAS-associated factor 1 22.7 43 0.0015 29.5 2.5 48 403-450 25-76 (178)
71 1hry_A Human SRY; DNA, DNA-bin 20.4 1.7E+02 0.0058 21.1 5.2 32 76-107 36-67 (76)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.6e-108 Score=869.70 Aligned_cols=467 Identities=24% Similarity=0.346 Sum_probs=437.0
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
+.|||||| +|+++.+|++++++ ||+||++++++ +.++.+|+++||++|++||+.|+++|+.+|.++|+++
T Consensus 6 ~~kl~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~ 75 (490)
T 2wme_A 6 EQKLYIGG-RYVEASSGATFETI--------NPANGEVLAKV-QRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRA 75 (490)
T ss_dssp CBCEECSS-SEECCSSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCcEEECC-eeeCCCCCCEEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 47899999 99999999999988 88899999766 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|++|+++|++++++|+|||+.+++..|+..+++.++++++..+++.... . +...+...+++++|+|||++|+|
T Consensus 76 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~-~---~~~~~~~~~~~~~P~GVv~~I~P 151 (490)
T 2wme_A 76 VDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ-I---PLRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEE-E---EEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcc-c---cccCCcceeEEecceeEEEEecc
Confidence 9999999999999999999999999986679999999999999887643321 1 12234567889999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|++|+ ||+|+||||+
T Consensus 152 wNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~ 231 (490)
T 2wme_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred ccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECCh
Confidence 99999999999999999999999999999999999999999999 99999999999 678999999997 9999999999
Q ss_pred HHHHHHHH-HHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109 256 RVGRIVMA-AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (543)
Q Consensus 256 ~~g~~i~~-~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 334 (543)
.+|+.+++ .+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus 232 ~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 310 (490)
T 2wme_A 232 STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERV 310 (490)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHH
Confidence 99998876 556789999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCccccccccc
Q 009109 335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFG 407 (543)
Q Consensus 335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (543)
+++++|||.+ ++++||++++.+++++.++|+++.. ++++++||... .+|+|++|||+.+++++|++++||+||
T Consensus 311 ~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFG 390 (490)
T 2wme_A 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFG 390 (490)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCS
T ss_pred HhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccC
Confidence 9999999987 7799999999999999999999875 67999999763 258999999999999999999999999
Q ss_pred ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109 408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487 (543)
Q Consensus 408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~ 487 (543)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 391 PVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~ 468 (490)
T 2wme_A 391 PVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLT 468 (490)
T ss_dssp SEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHH
T ss_pred CEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHH
Confidence 99999999999999999999999999999999999999999999999999998653 5678999999999999999999
Q ss_pred HHHHhhhceEEEEec
Q 009109 488 SFDAFSHKKAVLYRS 502 (543)
Q Consensus 488 ~~~~~~~~k~v~~~~ 502 (543)
|+++||+.|+|+++.
T Consensus 469 gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 469 TLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHHhhceeEEEEEC
Confidence 999999999999875
No 2
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=5.5e-103 Score=837.85 Aligned_cols=470 Identities=27% Similarity=0.391 Sum_probs=439.6
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh-----hhcCCCHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-----SRKTKSYEWRMS 93 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~ 93 (543)
..++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+ .|+.++..+|.+
T Consensus 7 ~~~~~i~g-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~ 76 (503)
T 3iwj_A 7 TRQLFING-DWKAPVLNKRIPVI--------NPATQNIIGDI-PAATKEDVDVAVAAAKTALTRNKGADWATASGAVRAR 76 (503)
T ss_dssp CCCEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHH
T ss_pred CCceeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHH
Confidence 36799999 99999888888887 88899999766 99999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEE
Q 009109 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (543)
Q Consensus 94 iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 173 (543)
+|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..++++.+...........+...+++++|+|||
T Consensus 77 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 155 (503)
T 3iwj_A 77 YLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVV 155 (503)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceE
Confidence 999999999999999999999999999999975 9999999999999998887654322111112345678999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEE
Q 009109 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (543)
Q Consensus 174 ~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ 250 (543)
++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+
T Consensus 156 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~ 235 (503)
T 3iwj_A 156 GLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVA 235 (503)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEE
T ss_pred EEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 567899999996 99999
Q ss_pred EeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHH
Q 009109 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (543)
Q Consensus 251 ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l 330 (543)
||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|
T Consensus 236 FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 314 (503)
T 3iwj_A 236 FTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRI 314 (503)
T ss_dssp EESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHH
T ss_pred EECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC---CCCceeeceEeeCCCCCCccccccc
Q 009109 331 RNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEI 405 (543)
Q Consensus 331 ~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~ 405 (543)
+++++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+
T Consensus 315 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 394 (503)
T 3iwj_A 315 VKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEV 394 (503)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCC
T ss_pred HHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCcee
Confidence 99999999999987 6799999999999999999999875 67999999764 4799999999999999999999999
Q ss_pred ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcch
Q 009109 406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485 (543)
Q Consensus 406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g 485 (543)
||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|
T Consensus 395 FGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G 472 (503)
T 3iwj_A 395 FGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELG 472 (503)
T ss_dssp CSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSH
T ss_pred eCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcch
Confidence 9999999999999999999999999999999999999999999999999999998753 56889999999999999999
Q ss_pred HHHHHHhhhceEEEEec
Q 009109 486 KFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 486 ~~~~~~~~~~k~v~~~~ 502 (543)
.+|+++|++.|+|+++.
T Consensus 473 ~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 473 EWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp HHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhhCeEEEEEeC
Confidence 99999999999998875
No 3
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=4.8e-103 Score=835.74 Aligned_cols=478 Identities=20% Similarity=0.312 Sum_probs=437.2
Q ss_pred cchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcC
Q 009109 6 VRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKT 85 (543)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~ 85 (543)
.+.|+-.+.++. ..++|||| +|+.+.++ +++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.
T Consensus 13 ~~~~~~~~~~~~-~~~~~I~G-~~~~~~~~-~~~v~--------nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~w~~ 80 (498)
T 4f3x_A 13 LGTENLYFQSMM-DTQLLIGS-RFEAGTEA-EEHIL--------NPRTGAGIIDL-AEASHAQIDAAVDAAERAFVGWSQ 80 (498)
T ss_dssp ----------CC-CCCEEETT-EEECCCSC-EEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCccchhhhhcc-ccCeeECC-EEeeCCCC-eEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhcc
Confidence 345555555553 35899999 99998777 88888 88899999766 999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceE
Q 009109 86 KSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI 165 (543)
Q Consensus 86 ~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (543)
+++.+|.++|++++++|+++.++|++++++|+|||..++...|+..+++.++++++.++++.... .. ....+...++
T Consensus 81 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~-~~--~~~~~~~~~~ 157 (498)
T 4f3x_A 81 TTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPA-AG--EYLPGHTSMI 157 (498)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC-BE--EEETTEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcc-cc--CCcccccceE
Confidence 99999999999999999999999999999999999999933699999999999999887754322 11 1123456789
Q ss_pred EeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhC
Q 009109 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQ 244 (543)
Q Consensus 166 ~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~ 244 (543)
+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|+||+|+| +.+.+++|++|
T Consensus 158 ~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~ 237 (498)
T 4f3x_A 158 RRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINH 237 (498)
T ss_dssp EEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTC
T ss_pred EEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 66799999999
Q ss_pred C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcH
Q 009109 245 K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA 323 (543)
Q Consensus 245 ~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~ 323 (543)
+ ||+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|
T Consensus 238 p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~ 316 (498)
T 4f3x_A 238 PKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIY 316 (498)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEEEEETTTH
T ss_pred CCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceEEecHHHH
Confidence 6 999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CC-EEEECcccC-CCCceeeceEeeCCCCCCc
Q 009109 324 PKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SD-KIVYGGQRD-EKQLKIAPTILLDVPDDST 399 (543)
Q Consensus 324 ~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~-~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~ 399 (543)
|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.+ ++ ++++||... ..|+|++|||+.+++++|+
T Consensus 317 d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~ 396 (498)
T 4f3x_A 317 EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDE 396 (498)
T ss_dssp HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCCh
Confidence 999999999999999999976 6799999999999999999999865 67 999999763 4799999999999999999
Q ss_pred ccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCC
Q 009109 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479 (543)
Q Consensus 400 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG 479 (543)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.+ .+.+||||+|.||
T Consensus 397 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG 474 (498)
T 4f3x_A 397 IVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML--TNEMPHGGIKQSG 474 (498)
T ss_dssp HHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCSGGGE
T ss_pred hhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999998764 4899999999999
Q ss_pred CCCcchHHHHHHhhhceEEEEe
Q 009109 480 MGSYHGKFSFDAFSHKKAVLYR 501 (543)
Q Consensus 480 ~G~~~g~~~~~~~~~~k~v~~~ 501 (543)
+|+++|.+++++|++.|+|+++
T Consensus 475 ~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 475 YGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp ECCBSHHHHHHHTEEEEEEEEE
T ss_pred cCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999874
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=8.6e-103 Score=834.46 Aligned_cols=467 Identities=22% Similarity=0.331 Sum_probs=438.9
Q ss_pred cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (543)
Q Consensus 18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~ 97 (543)
...++|||| +|+.+.++++++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 10 ~~~~~~I~G-~~~~~~~~~~~~v~--------~P~tg~~i~~v-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 79 (506)
T 3rh9_A 10 ENLTGYIGG-RWKDSAGGATFDVY--------NPATGSVIAKV-PSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLED 79 (506)
T ss_dssp SCCSEEETT-EEECCCTTCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHH
T ss_pred cccCeeECC-EEeeCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 346899999 99999888888888 88899999765 999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEe-ecceEEEEE
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS-EPLGVVLVI 176 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i 176 (543)
++++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.+.. .+. ..+...++++ +|+|||++|
T Consensus 80 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVV~~I 154 (506)
T 3rh9_A 80 IRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHT-IPE---KPKDCTWTVHYRPVGVTGLI 154 (506)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEE-CSC---CGGGCEEEEEEEECCSEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccc---CCCceeeEeecccceEEEEE
Confidence 9999999999999999999999999998 599999999999999999875432 111 1344678888 999999999
Q ss_pred cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|||
T Consensus 155 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTG 234 (506)
T 3rh9_A 155 VPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTG 234 (506)
T ss_dssp CCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 668899999997 99999999
Q ss_pred ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (543)
Q Consensus 254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 333 (543)
|+++|+.|++++++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus 235 S~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 313 (506)
T 3rh9_A 235 STEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAER 313 (506)
T ss_dssp CHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CC-CCceeeceEeeCCCCCCcccccccccce
Q 009109 334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DE-KQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (543)
Q Consensus 334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (543)
++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. +. .|+|++|||+.+++++|++++||+||||
T Consensus 314 ~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 393 (506)
T 3rh9_A 314 VNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPL 393 (506)
T ss_dssp HHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSE
T ss_pred HHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcE
Confidence 99999999987 6799999999999999999999875 6799999975 33 7999999999999999999999999999
Q ss_pred eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489 (543)
Q Consensus 410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~ 489 (543)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ..+.+||||+|.||+|+++|.+|+
T Consensus 394 l~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl 471 (506)
T 3rh9_A 394 VPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGL 471 (506)
T ss_dssp EEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHH
Confidence 999999999999999999999999999999999999999999999999999875 457899999999999999999999
Q ss_pred HHhhhceEEEEec
Q 009109 490 DAFSHKKAVLYRS 502 (543)
Q Consensus 490 ~~~~~~k~v~~~~ 502 (543)
++|++.|+|+++.
T Consensus 472 ~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 472 FEFVEAQTVPRGF 484 (506)
T ss_dssp TTTEEEEEEEEC-
T ss_pred HHhcceEEEEEcC
Confidence 9999999998864
No 5
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.7e-103 Score=833.11 Aligned_cols=465 Identities=23% Similarity=0.354 Sum_probs=434.9
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++++++++ ||.||++++++ +.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus 12 ~~~~~I~G-~~~~~~~~~~~~v~--------~P~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 81 (484)
T 3ifg_A 12 RHQAYIGG-EWQAADSDATFEVF--------DPATGESLGTV-PKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRW 81 (484)
T ss_dssp CCSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred ccceeECC-EEeeCCCCCEEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 46799999 99998888888888 88899999766 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|++++++|++++++|+|||..+++. |+..+++.+++++...+++.... . .....+...+++++|+|||++|+|
T Consensus 82 a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~-~--~~~~~~~~~~~~~~P~GVv~~I~P 157 (484)
T 3ifg_A 82 FDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDT-L--PTPDANKRIVVVKEPIGVCAAITP 157 (484)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEE-E--CCSSTTEEEEEEEEECSSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCcc-c--cccCCCceeEEEecCCcEEEEECC
Confidence 9999999999999999999999999985 99999999999998776643211 1 111134567899999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus 158 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~ 237 (484)
T 3ifg_A 158 WNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGST 237 (484)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred CcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999999 567899999996 9999999999
Q ss_pred HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (543)
Q Consensus 256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 335 (543)
++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus 238 ~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 316 (484)
T 3ifg_A 238 AVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVS 316 (484)
T ss_dssp HHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeee
Q 009109 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (543)
Q Consensus 336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 412 (543)
++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|
T Consensus 317 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 396 (484)
T 3ifg_A 317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPL 396 (484)
T ss_dssp TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEE
T ss_pred hccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEE
Confidence 999999986 6799999999999999999999875 67999999764 37999999999999999999999999999999
Q ss_pred eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109 413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492 (543)
Q Consensus 413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~ 492 (543)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.. ...+.+||||+|.||+|+++|.+|+++|
T Consensus 397 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~ 474 (484)
T 3ifg_A 397 FRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDY 474 (484)
T ss_dssp EEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC--CCCSSSCBCCEETTEECCBSTTTTTGGG
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999864 3578999999999999999999999999
Q ss_pred hhceEEEE
Q 009109 493 SHKKAVLY 500 (543)
Q Consensus 493 ~~~k~v~~ 500 (543)
++.|+|++
T Consensus 475 ~~~k~v~~ 482 (484)
T 3ifg_A 475 VVIKYLCV 482 (484)
T ss_dssp EEEEEEEE
T ss_pred hceEEEEE
Confidence 99999876
No 6
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.5e-102 Score=833.49 Aligned_cols=467 Identities=22% Similarity=0.355 Sum_probs=438.5
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQIQ 96 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~--~~w~~~~~~~R~~iL~ 96 (543)
..++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++|| +.|+.++..+|.++|+
T Consensus 32 ~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~ 101 (520)
T 3ed6_A 32 SQRQYIDG-EWVESANKNTRDII--------NPYNQEVIFTV-SEGTKEDAERAILAARRAFESGEWSQETAETRGKKVR 101 (520)
T ss_dssp CCSEEETT-EEECCTTCCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHH
T ss_pred CCceEECC-EEecCCCCCEEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHH
Confidence 45799999 99999888888888 88899999766 9999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (543)
Q Consensus 97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i 176 (543)
+++++|++++++|++++++|+|||+.+++. |+..+++.+++++..++++.+.. .. ....+...+++++|+|||++|
T Consensus 102 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~-~~--~~~~~~~~~~~~~P~GVV~~I 177 (520)
T 3ed6_A 102 AIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEM-ID--SPIPDTESKIVKEPVGVVTQI 177 (520)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEE-EC--CSSTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCee-cc--cCCCCCcccccccCccEEEEE
Confidence 999999999999999999999999999985 99999999999999887754321 11 111345678999999999999
Q ss_pred cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+|||
T Consensus 178 ~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTG 257 (520)
T 3ed6_A 178 TPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTG 257 (520)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 678999999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (543)
Q Consensus 254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 333 (543)
|+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus 258 S~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 336 (520)
T 3ed6_A 258 GIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDR 336 (520)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccc
Q 009109 334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF 406 (543)
Q Consensus 334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (543)
++++++|||.+ .+++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+|
T Consensus 337 ~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiF 416 (520)
T 3ed6_A 337 VKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVF 416 (520)
T ss_dssp HTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCcee
Confidence 99999999986 6799999999999999999999875 57999999764 46999999999999999999999999
Q ss_pred cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchH
Q 009109 407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK 486 (543)
Q Consensus 407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~ 486 (543)
|||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.
T Consensus 417 GPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~ 494 (520)
T 3ed6_A 417 GPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGK 494 (520)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHH
T ss_pred CcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchH
Confidence 9999999999999999999999999999999999999999999999999999998763 68899999999999999999
Q ss_pred HHHHHhhhceEEEEec
Q 009109 487 FSFDAFSHKKAVLYRS 502 (543)
Q Consensus 487 ~~~~~~~~~k~v~~~~ 502 (543)
+|+++|++.|+|+++.
T Consensus 495 ~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 495 EGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHHTTEEEEEEEEES
T ss_pred HHHHHhhceEEEEEcC
Confidence 9999999999998864
No 7
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.2e-102 Score=833.05 Aligned_cols=466 Identities=21% Similarity=0.348 Sum_probs=435.4
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++++++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.+++.+|.++|+++
T Consensus 32 ~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~ 101 (504)
T 3ek1_A 32 KSQCLVNG-RWIDAADGTTIKVT--------NPADGSVIGTV-PSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKW 101 (504)
T ss_dssp CSSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccCeEECC-EEeeCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHH
Confidence 35799999 99999888888888 88899999765 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|++++++|++++++|+|||..+++. |+..+++.+++++...+++.... . .....+...+++++|+|||++|+|
T Consensus 102 a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~-~--~~~~~~~~~~~~~~P~GVV~~I~P 177 (504)
T 3ek1_A 102 FDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDT-I--PAPQNGQRLTVIRQPVGVTAAITP 177 (504)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEE-E--CCSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-c--ccccccccceeeccCceEEEEECC
Confidence 9999999999999999999999999985 99999999999998776642211 1 111224567899999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus 178 wN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~ 257 (504)
T 3ek1_A 178 WNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGST 257 (504)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999998 567899999996 9999999999
Q ss_pred HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (543)
Q Consensus 256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 335 (543)
++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus 258 ~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 336 (504)
T 3ek1_A 258 EVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336 (504)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (543)
Q Consensus 336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 413 (543)
++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 337 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 415 (504)
T 3ek1_A 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLF 415 (504)
T ss_dssp TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEE
T ss_pred hcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEE
Confidence 999999986 6799999999999999999999875 6799999976 468999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109 414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493 (543)
Q Consensus 414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~ 493 (543)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++|+
T Consensus 416 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t 493 (504)
T 3ek1_A 416 AFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYL 493 (504)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGE
T ss_pred EeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998763 5688999999999999999999999999
Q ss_pred hceEEEEec
Q 009109 494 HKKAVLYRS 502 (543)
Q Consensus 494 ~~k~v~~~~ 502 (543)
+.|+|++..
T Consensus 494 ~~K~v~~~~ 502 (504)
T 3ek1_A 494 ETKYICSAY 502 (504)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEEec
Confidence 999998753
No 8
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.7e-102 Score=831.62 Aligned_cols=468 Identities=24% Similarity=0.368 Sum_probs=439.6
Q ss_pred cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHH
Q 009109 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQ 94 (543)
Q Consensus 18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~--~~w~~~~~~~R~~i 94 (543)
...++|||| +|+.+.++++++++ ||.| |++++.+ +.++.+|+++|+++|++|| ..|+.++..+|.++
T Consensus 21 ~~~~~~I~G-~~~~~~~~~~~~v~--------nP~t~g~~i~~~-~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~ 90 (528)
T 3u4j_A 21 SRYQMLVDG-KSVDAASGSTIDRV--------SPGHAGEVVGTW-PEASADDVRKAVAAARKAFDAGPWPRMSGAERSRL 90 (528)
T ss_dssp CBCCEEETT-EEECCTTCCEEEEE--------CTTSTTCEEEEE-ECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHH
T ss_pred cccceeECC-EEecCCCCCEEEEe--------CCCCCCcEEEEE-eCCCHHHHHHHHHHHHHhccccccccCCHHHHHHH
Confidence 456899999 99999888888888 8889 9999766 9999999999999999999 88999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEE
Q 009109 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (543)
Q Consensus 95 L~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 174 (543)
|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.++++.... .+ ....+...+++++|+|||+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GVV~ 166 (528)
T 3u4j_A 91 MFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQT-HN--NIGDDRLGLVLREPVGVVG 166 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-EC--CSCTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCee-ec--cCCCCceeEEEeccceEEE
Confidence 9999999999999999999999999999995 699999999999999988865321 11 1113456789999999999
Q ss_pred EEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEE
Q 009109 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (543)
Q Consensus 175 ~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~f 251 (543)
+|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|
T Consensus 167 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~F 246 (528)
T 3u4j_A 167 IITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAF 246 (528)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEE
T ss_pred EECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 778999999996 999999
Q ss_pred eCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (543)
Q Consensus 252 tGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~ 331 (543)
|||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+
T Consensus 247 TGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 325 (528)
T 3u4j_A 247 TGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLL 325 (528)
T ss_dssp ESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC--CCceeeceEeeCCCCCCccccccccc
Q 009109 332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFG 407 (543)
Q Consensus 332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (543)
++++++++|||.+ ++++||++++.+++++.++++++.+ |+++++||.... .|+|++|||+.+++++|++++||+||
T Consensus 326 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 405 (528)
T 3u4j_A 326 DISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFG 405 (528)
T ss_dssp HHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCS
T ss_pred HHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeec
Confidence 9999999999987 6799999999999999999999875 679999997644 79999999999999999999999999
Q ss_pred ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109 408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487 (543)
Q Consensus 408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~ 487 (543)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 406 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~ 483 (528)
T 3u4j_A 406 PVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRY 483 (528)
T ss_dssp SEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTH
T ss_pred cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHH
Confidence 99999999999999999999999999999999999999999999999999999864 4789999999999999999999
Q ss_pred HHHHhhhceEEEEec
Q 009109 488 SFDAFSHKKAVLYRS 502 (543)
Q Consensus 488 ~~~~~~~~k~v~~~~ 502 (543)
|+++|++.|+|+++.
T Consensus 484 gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 484 GFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHHTEEEEEEEEES
T ss_pred HHHHhhceEEEEEeC
Confidence 999999999998865
No 9
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.1e-101 Score=824.97 Aligned_cols=465 Identities=22% Similarity=0.330 Sum_probs=433.9
Q ss_pred ccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 009109 15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ 94 (543)
Q Consensus 15 ~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~i 94 (543)
+|....++|||| +|+.+.++++++++ ||+||++++.+ +.++.+|+++|+++|++||+.|+.+++.+|.++
T Consensus 21 ~m~~~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 90 (497)
T 3i44_A 21 SMLNKRKFYING-LWDDPSTPHDLYVI--------DPSTEEACAVI-SLGSTRDADKAINAAKKAFQTWKTTSPHERLGF 90 (497)
T ss_dssp -CEEECCEEETT-EEECCSSCCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccccccCeeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 555678999999 99999888888888 88899999765 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEE-eecceEE
Q 009109 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII-SEPLGVV 173 (543)
Q Consensus 95 L~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv 173 (543)
|++++++|+++.++|++++++|+|||+.+++..|+..+++.++++++.+..+...... ..+...++. ++|+|||
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv 165 (497)
T 3i44_A 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVV 165 (497)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEE
Confidence 9999999999999999999999999999998459999999999999988775432110 013456778 9999999
Q ss_pred EEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEE
Q 009109 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (543)
Q Consensus 174 ~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ 250 (543)
++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+
T Consensus 166 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~ 245 (497)
T 3i44_A 166 GLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMIS 245 (497)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 678999999996 99999
Q ss_pred EeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHH
Q 009109 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (543)
Q Consensus 251 ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l 330 (543)
||||+++|+.|++.+++++||+++|||||||+||++||| +.|++.+++++| .|+||.|++++|||||+++||+|+++|
T Consensus 246 FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (497)
T 3i44_A 246 FTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTA 323 (497)
T ss_dssp EESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHH
T ss_pred EeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 999999999999 999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcc-cCC---CCceeeceEeeCCCCCCcccccc
Q 009109 331 RNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQ-RDE---KQLKIAPTILLDVPDDSTIMKEE 404 (543)
Q Consensus 331 ~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~-~~~---~g~~~~Ptvl~~~~~~~~~~~~E 404 (543)
+++++++++|||.+ ++++||++++.+++++.++|+++.+ ++++++||. .+. .|+|++|||+.+++++|++++||
T Consensus 324 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 403 (497)
T 3i44_A 324 KDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREE 403 (497)
T ss_dssp HHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCc
Confidence 99999999999987 6799999999999999999999865 679999994 332 69999999999999999999999
Q ss_pred cccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcc
Q 009109 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH 484 (543)
Q Consensus 405 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~ 484 (543)
+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. . ...+.+||||+|.||+|+++
T Consensus 404 iFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~ 480 (497)
T 3i44_A 404 IFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREG 480 (497)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBS
T ss_pred ccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccc
Confidence 99999999999999999999999999999999999999999999999999999994 2 35688999999999999999
Q ss_pred hHHHHHHhhhceEEE
Q 009109 485 GKFSFDAFSHKKAVL 499 (543)
Q Consensus 485 g~~~~~~~~~~k~v~ 499 (543)
|.+++++|++.|+|+
T Consensus 481 G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 481 GLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHTTEEEEEES
T ss_pred hHHHHHHhcceeEEE
Confidence 999999999999985
No 10
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=5.1e-102 Score=830.55 Aligned_cols=468 Identities=21% Similarity=0.317 Sum_probs=434.7
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS 97 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~ 97 (543)
.++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+ .|+.+++.+|.++|++
T Consensus 37 ~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~ 106 (517)
T 2o2p_A 37 YQLFIGG-EFVDAEGSKTYNTI--------NPTDGSVICQV-SLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYR 106 (517)
T ss_dssp CSEEETT-EEECCGGGCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHH
T ss_pred CCeEECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHH
Confidence 4689999 99988777777777 88899999666 99999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCC-cceEEeecceEEEEE
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPS-SAEIISEPLGVVLVI 176 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~GVv~~i 176 (543)
++++|+++.++|++++++|+|||+.+++..|+..+++.++++++.++++.+.. .+......+. ..++.++|+|||++|
T Consensus 107 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I 185 (517)
T 2o2p_A 107 LADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIV 185 (517)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEE
Confidence 99999999999999999999999999974599999999999999888765422 1111000122 568999999999999
Q ss_pred cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|||
T Consensus 186 ~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTG 265 (517)
T 2o2p_A 186 IPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265 (517)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 567899999996 99999999
Q ss_pred ChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109 254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (543)
Q Consensus 254 S~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~ 332 (543)
|+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus 266 S~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 344 (517)
T 2o2p_A 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVE 344 (517)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccce
Q 009109 333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (543)
Q Consensus 333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (543)
+++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.... .|+|++|||+.+++++|++++||+||||
T Consensus 345 ~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 424 (517)
T 2o2p_A 345 EVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPI 424 (517)
T ss_dssp HHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred HHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccE
Confidence 999999999976 6899999999999999999999865 679999997643 6999999999999999999999999999
Q ss_pred eeeeccCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109 410 LPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487 (543)
Q Consensus 410 l~v~~~~~--~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~ 487 (543)
++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 425 l~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~ 502 (517)
T 2o2p_A 425 MIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEA 502 (517)
T ss_dssp EEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHH
T ss_pred EEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHH
Confidence 99999999 9999999999999999999999999999999999999999998754 4678999999999999999999
Q ss_pred HHHHhhhceEEEEe
Q 009109 488 SFDAFSHKKAVLYR 501 (543)
Q Consensus 488 ~~~~~~~~k~v~~~ 501 (543)
++++|++.|+|+++
T Consensus 503 ~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 503 ALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHHhCCceEEEee
Confidence 99999999999764
No 11
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4e-102 Score=831.38 Aligned_cols=468 Identities=24% Similarity=0.338 Sum_probs=437.2
Q ss_pred cccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 009109 16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI 95 (543)
Q Consensus 16 ~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL 95 (543)
+....++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus 11 ~~~~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 80 (517)
T 3r31_A 11 AQPKASHFIDG-DYVEDNTGTPFESI--------FPATGEMIAKL-HAATPAIVERAIASAKRAQKEWAAMSPMARGRIL 80 (517)
T ss_dssp TCCSSSEEETT-EEECCTTSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred cccccCeeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 44557899999 99999888888888 88899999766 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh---hcCCCcccccCcCCCCcceEEeecceE
Q 009109 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISEPLGV 172 (543)
Q Consensus 96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GV 172 (543)
++++++|++++++|++++++|+|||..++ |+..+++.++++++..+. |........ ..+. .+++++|+||
T Consensus 81 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GV 153 (517)
T 3r31_A 81 KRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGV 153 (517)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccE
Confidence 99999999999999999999999999988 999999999999998876 333332211 1234 8899999999
Q ss_pred EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEE
Q 009109 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKIL 250 (543)
Q Consensus 173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ 250 (543)
|++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ ||+|+
T Consensus 154 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~ 233 (517)
T 3r31_A 154 CVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVS 233 (517)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEe
Confidence 99999999999999999999999999999999999999999999999999 99999999999888999999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHH
Q 009109 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (543)
Q Consensus 251 ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l 330 (543)
||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|
T Consensus 234 FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 312 (517)
T 3r31_A 234 LTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENL 312 (517)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcc-cC---CCCceeeceEeeCCCCCCcccccc
Q 009109 331 RNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQ-RD---EKQLKIAPTILLDVPDDSTIMKEE 404 (543)
Q Consensus 331 ~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~-~~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (543)
+++++++++|||.+ ++++||++++.+++++.++|+++.+ ++++++||. .+ ..|+|++|||+.+++++|++++||
T Consensus 313 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 392 (517)
T 3r31_A 313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREE 392 (517)
T ss_dssp HHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSC
T ss_pred HHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccce
Confidence 99999999999987 6799999999999999999999875 679999993 11 368999999999999999999999
Q ss_pred cccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcc
Q 009109 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH 484 (543)
Q Consensus 405 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~ 484 (543)
+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++
T Consensus 393 iFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~ 470 (517)
T 3r31_A 393 IFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGREN 470 (517)
T ss_dssp CSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBS
T ss_pred eeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999764 5789999999999999999
Q ss_pred hHHHHHHhhhceEEEEecC
Q 009109 485 GKFSFDAFSHKKAVLYRSF 503 (543)
Q Consensus 485 g~~~~~~~~~~k~v~~~~~ 503 (543)
|.+|+++|++.|+|+++..
T Consensus 471 G~~gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 471 SAAALEHYSELKTVYVSTG 489 (517)
T ss_dssp TGGGGGGSEEEEEEEECCC
T ss_pred hHHHHHHhhceEEEEEcCC
Confidence 9999999999999988653
No 12
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=6.2e-102 Score=828.51 Aligned_cols=468 Identities=22% Similarity=0.322 Sum_probs=437.6
Q ss_pred cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (543)
Q Consensus 18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~ 97 (543)
...++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 11 ~~~~~~I~G-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 80 (497)
T 3k2w_A 11 KNKVNFIGG-QYVPSNESDTIDIL--------SPSTGKVIGEI-PAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRT 80 (497)
T ss_dssp CTTCEEETT-EEECCSSCCEEEEE--------CSSSCSEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred cccceeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 446899999 99999888888888 88899999766 999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 177 (543)
++++|+++.++|++++++|+|||..+++ .|+..+++.+++++..++++.+... . ....+...++.++|+|||++|+
T Consensus 81 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVV~~I~ 156 (497)
T 3k2w_A 81 FANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-P--SDNQDEKIYIHKVPRGVVVGIT 156 (497)
T ss_dssp HHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-E--CSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-c--cCCCCcceeEEEcCCceEEEEC
Confidence 9999999999999999999999999998 4999999999999998887754321 1 1123456788999999999999
Q ss_pred CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (543)
Q Consensus 178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS 254 (543)
|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||
T Consensus 157 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS 236 (497)
T 3k2w_A 157 AWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGS 236 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999999 99999999999 668999999997 999999999
Q ss_pred hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (543)
Q Consensus 255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 334 (543)
+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus 237 ~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (497)
T 3k2w_A 237 TVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315 (497)
T ss_dssp HHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc--C-C--CCceeeceEeeCCCCCCccccccccc
Q 009109 335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR--D-E--KQLKIAPTILLDVPDDSTIMKEEIFG 407 (543)
Q Consensus 335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~--~-~--~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (543)
+++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. . . .|+|++|||+.+++++|++++||+||
T Consensus 316 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 395 (497)
T 3k2w_A 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFG 395 (497)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccC
Confidence 9999999987 6799999999999999999999865 6899999973 2 2 68999999999999999999999999
Q ss_pred ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109 408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487 (543)
Q Consensus 408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~ 487 (543)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+
T Consensus 396 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~ 473 (497)
T 3k2w_A 396 PILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKF 473 (497)
T ss_dssp SEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHH
T ss_pred cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHH
Confidence 999999999999999999999999999999999999999999999999999998764 488999999999999999999
Q ss_pred HHHHhhhceEEEEec
Q 009109 488 SFDAFSHKKAVLYRS 502 (543)
Q Consensus 488 ~~~~~~~~k~v~~~~ 502 (543)
|+++|++.|+|+++.
T Consensus 474 gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 474 GLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHHhcceEEEEEEc
Confidence 999999999998865
No 13
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.3e-101 Score=831.07 Aligned_cols=468 Identities=20% Similarity=0.319 Sum_probs=436.9
Q ss_pred cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (543)
Q Consensus 18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~ 96 (543)
...++|||| +|+. ++.+++++ ||.| |++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|+
T Consensus 36 ~~~~~~I~G-~~~~--~~~~~~~~--------nP~t~~~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 103 (538)
T 3qan_A 36 KEYPLIING-ERVT--TEDKIQSW--------NPARKDQLVGSV-SKANQDLAEKAIQSADEAFQTWRNVNPEERANILV 103 (538)
T ss_dssp EEECEEETT-EEEC--CSSEEEEE--------CSSSTTCEEEEE-ECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred cccceeECC-EEec--CCCeEEEE--------CCCCCCcEEEEE-cCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHH
Confidence 356899999 9998 66777777 8889 9999766 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (543)
Q Consensus 97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i 176 (543)
+++++|++++++|++++++|+|||..+++. |+..+++.++++++.+.++..++.... ..+...+++++|+|||++|
T Consensus 104 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I 179 (538)
T 3qan_A 104 KAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTI 179 (538)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEE
Confidence 999999999999999999999999999986 999999999999998666665543321 1245678999999999999
Q ss_pred cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+|||
T Consensus 180 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTG 259 (538)
T 3qan_A 180 SPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTG 259 (538)
T ss_dssp CCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEES
T ss_pred CCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999998 99999999999 677899999996 99999999
Q ss_pred ChHHHHHHHHHHhcc------cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHH
Q 009109 254 SPRVGRIVMAAAAKH------LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI 327 (543)
Q Consensus 254 S~~~g~~i~~~a~~~------~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~ 327 (543)
|+++|+.|++.++++ +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+
T Consensus 260 S~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~ 338 (538)
T 3qan_A 260 SKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVL 338 (538)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHH
T ss_pred CHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHH
Confidence 999999999999998 9999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCC-CCceeeceEeeCCCCCCccccccc
Q 009109 328 DSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEI 405 (543)
Q Consensus 328 ~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~ 405 (543)
++|+++++++++|||.+ ++++||++++.+++++.++++++.+.+++++||..+. .|+|++|||+.+++++|++++||+
T Consensus 339 ~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 418 (538)
T 3qan_A 339 EKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEI 418 (538)
T ss_dssp HHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCC
T ss_pred HHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCc
Confidence 99999999999999986 7799999999999999999999876449999998754 799999999999999999999999
Q ss_pred ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-Ccc
Q 009109 406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYH 484 (543)
Q Consensus 406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~ 484 (543)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+| +++
T Consensus 419 FGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (538)
T 3qan_A 419 FGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498 (538)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred CCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence 9999999999999999999999999999999999999999999999999999995444345789999999999999 999
Q ss_pred hHHHHHHhhhceEEEEec
Q 009109 485 GKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 485 g~~~~~~~~~~k~v~~~~ 502 (543)
|.+|+++|++.|+|+++.
T Consensus 499 G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 499 GPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp STTTGGGGEEEEEEEEEC
T ss_pred cHHHHHHhhCeEEEEEec
Confidence 999999999999998864
No 14
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.1e-101 Score=826.44 Aligned_cols=466 Identities=24% Similarity=0.367 Sum_probs=435.1
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus 11 ~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 80 (505)
T 3prl_A 11 NANILRNG-EWVESRTGERISIS--------APASGVALGSI-PALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAW 80 (505)
T ss_dssp ECCEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred ccCeeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 35899999 99999888888888 88899999765 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCC---CCcceEEeecceEEEE
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY---PSSAEIISEPLGVVLV 175 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~ 175 (543)
+++|+++.++|++++++|+|||..+++. |+..+++.++++++.++++.+.. ........ +...+++++|+|||++
T Consensus 81 a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~ 158 (505)
T 3prl_A 81 ADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLA 158 (505)
T ss_dssp HHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEE
Confidence 9999999999999999999999999985 99999999999999988865432 11110000 3456889999999999
Q ss_pred EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT 252 (543)
Q Consensus 176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft 252 (543)
|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|+|+||
T Consensus 159 I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FT 238 (505)
T 3prl_A 159 ISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFT 238 (505)
T ss_dssp EECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEE
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEe
Confidence 99999999999999999999999999999999999999999999998 99999999999 578899999996 9999999
Q ss_pred CChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (543)
Q Consensus 253 GS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~ 332 (543)
||+++|+.|++.++ +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus 239 GS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 315 (505)
T 3prl_A 239 GGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKE 315 (505)
T ss_dssp SCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHH
Confidence 99999999999888 9999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceee
Q 009109 333 ELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (543)
Q Consensus 333 ~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 411 (543)
+++++++|||.+++++||++++.+++++.++++++.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 316 ~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 393 (505)
T 3prl_A 316 LVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLP 393 (505)
T ss_dssp HHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred HHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEE
Confidence 9999999999877799999999999999999999875 6799999974 689999999999999999999999999999
Q ss_pred eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109 412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA 491 (543)
Q Consensus 412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~ 491 (543)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++
T Consensus 394 V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~~PFGG~k~SG~Gr~~g~~~~~~ 472 (505)
T 3prl_A 394 IIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTE-RGPDHFPFLGVKKSGLGVQGIKPSLLS 472 (505)
T ss_dssp EEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCC-SCSTTSCBCCEETTEESCBSHHHHHHH
T ss_pred EEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCC-CCCCCCCcCCcCcCCCCcCccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875 356889999999999999999999999
Q ss_pred hhhceEEEEec
Q 009109 492 FSHKKAVLYRS 502 (543)
Q Consensus 492 ~~~~k~v~~~~ 502 (543)
|++.|+|+++.
T Consensus 473 f~~~k~v~~~~ 483 (505)
T 3prl_A 473 MTRERVTVLNL 483 (505)
T ss_dssp TEEEEEEEEEC
T ss_pred hhceEEEEEeC
Confidence 99999998864
No 15
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.9e-102 Score=829.05 Aligned_cols=476 Identities=21% Similarity=0.273 Sum_probs=435.8
Q ss_pred chhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 009109 7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (543)
Q Consensus 7 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~ 86 (543)
.|+|+.+ ...++|||| +|+.+.++++++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.+
T Consensus 18 ~~~~s~m----~~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~ 83 (521)
T 4e4g_A 18 LYFQSMM----YELGHFIDG-KRVAGTSGRVSNIF--------NPATGEVQGTV-ALASDADLAAAVESAKAAQPKWAAT 83 (521)
T ss_dssp ------C----EEECEEETT-EEECCSSSCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred hhHhhhh----hccCeeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccC
Confidence 4555533 345899999 99999888888888 88899999766 9999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEE
Q 009109 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII 166 (543)
Q Consensus 87 ~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (543)
+..+|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++..+. ....... ....+...+++
T Consensus 84 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~-~~~~~~~--~~~~~~~~~~~ 159 (521)
T 4e4g_A 84 NPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHL-QKSEFTE--GAGPGIDMYSI 159 (521)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHH-TCEEEEE--EEETTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHH-hcCcccc--cCCCCcceeEE
Confidence 9999999999999999999999999999999999999984 999999999999886554 3322111 11123457889
Q ss_pred eecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC
Q 009109 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK 245 (543)
Q Consensus 167 ~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~ 245 (543)
++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+.+|++|+
T Consensus 160 ~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p 239 (521)
T 4e4g_A 160 RQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHP 239 (521)
T ss_dssp EEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCT
T ss_pred EcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999888889999996
Q ss_pred -CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCC-cH
Q 009109 246 -WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FA 323 (543)
Q Consensus 246 -v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~-i~ 323 (543)
||+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++ +|
T Consensus 240 ~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~ 318 (521)
T 4e4g_A 240 DIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAVPVGEETA 318 (521)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHH
T ss_pred CcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEEEeCchHH
Confidence 999999999999999999999999999999999999999999999999999999999 999999999999999999 99
Q ss_pred HHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCC
Q 009109 324 PKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPD 396 (543)
Q Consensus 324 ~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~ 396 (543)
|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++.+ ++++++||... ..|+|++|||+.++++
T Consensus 319 d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~ 398 (521)
T 4e4g_A 319 NRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTP 398 (521)
T ss_dssp HHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCT
T ss_pred HHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCC
Confidence 999999999999999999976 6799999999999999999999865 67999999642 4689999999999999
Q ss_pred CCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCC
Q 009109 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG 476 (543)
Q Consensus 397 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~ 476 (543)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|
T Consensus 399 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k 477 (521)
T 4e4g_A 399 DMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWK 477 (521)
T ss_dssp TSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEE
T ss_pred CCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999998764 345789999999
Q ss_pred CCCCC--CcchHHHHHHhhhceEEEEec
Q 009109 477 ESGMG--SYHGKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 477 ~SG~G--~~~g~~~~~~~~~~k~v~~~~ 502 (543)
.||+| +++|.+|+++|++.|+|+++.
T Consensus 478 ~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 478 SSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp TTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred cCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999 799999999999999998754
No 16
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.8e-101 Score=823.00 Aligned_cols=465 Identities=23% Similarity=0.351 Sum_probs=433.5
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a 99 (543)
.++|||| +|+.+.+ .+++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++
T Consensus 24 ~~~~i~G-~~~~~~~-~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 92 (495)
T 1wnd_A 24 HKLLING-ELVSGEG-EKQPVY--------NPATGDVLLEI-AEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLA 92 (495)
T ss_dssp CCEEETT-EEECCCS-CEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cCeEECC-EEecCCC-CeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 4689999 9998755 677777 88899999766 99999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (543)
Q Consensus 100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~ 179 (543)
++|++++++|++++++|+|||..+++..|+..+++.++++++.++++.+.. .+. ...+...++.++|+|||++|+||
T Consensus 93 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVV~~I~Pw 169 (495)
T 1wnd_A 93 DVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA-AGE--YLEGHTSMIRRDPLGVVASIAPW 169 (495)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC-BEE--EETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccC--CCCCceeEEeeecCCeEEEECCC
Confidence 999999999999999999999999974499999999999999888764322 111 11233568899999999999999
Q ss_pred chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV 257 (543)
Q Consensus 180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~ 257 (543)
|||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|+||+|+| +.+.+.+|++|+ ||+|+||||+++
T Consensus 170 N~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~ 249 (495)
T 1wnd_A 170 NYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT 249 (495)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHH
T ss_pred cchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999999999999999 678899999997 999999999999
Q ss_pred HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (543)
Q Consensus 258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l 337 (543)
|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++
T Consensus 250 G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 328 (495)
T 1wnd_A 250 GEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATL 328 (495)
T ss_dssp HHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-C-CEEEECcc-cCCCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109 338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQ-RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (543)
Q Consensus 338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~-~~v~~gg~-~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 413 (543)
++|||.+ ++++|||+++.+++++.++++++.+ | +++++||. .++.|+|++|||+.+++++|++++||+||||++|+
T Consensus 329 ~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 408 (495)
T 1wnd_A 329 KSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVT 408 (495)
T ss_dssp CBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred cCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEE
Confidence 9999987 7899999999999999999999865 5 79999997 54469999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109 414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493 (543)
Q Consensus 414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~ 493 (543)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|+
T Consensus 409 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~ 486 (495)
T 1wnd_A 409 PFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYT 486 (495)
T ss_dssp EECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTE
T ss_pred EeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998754 4688999999999999999999999999
Q ss_pred hceEEEEe
Q 009109 494 HKKAVLYR 501 (543)
Q Consensus 494 ~~k~v~~~ 501 (543)
+.|+|+++
T Consensus 487 ~~k~v~~~ 494 (495)
T 1wnd_A 487 VVRHVMVK 494 (495)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEec
Confidence 99999763
No 17
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=3e-101 Score=823.64 Aligned_cols=466 Identities=23% Similarity=0.347 Sum_probs=435.5
Q ss_pred ccceeeecceecccCCccc-ccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHIS-FPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~-~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~ 97 (543)
..++|||| +|+.+.++.+ ++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 19 ~~~~~i~g-~~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 88 (503)
T 1a4s_A 19 DDLNYWGG-RRIKSKDGATTEPVF--------EPATGRVLCQM-VPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLE 88 (503)
T ss_dssp SCCEEETT-EEECCCTTCCCEEEE--------CTTTCCEEEEE-CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCceEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 35689999 9999877777 7777 88899999766 999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 177 (543)
++++|+++.++|++++++|+|||+.++. .|+..+++.++++++.++++.+. ..... .+...++.++|+|||++|+
T Consensus 89 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~ 163 (503)
T 1a4s_A 89 AARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQ-HIQLP---GGAFAYTRREPLGVCAGIL 163 (503)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEE-EEECG---GGCEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-cccCC---CCceeEEEEecCceEEEEC
Confidence 9999999999999999999999999997 49999999999999998886542 11111 2345688999999999999
Q ss_pred CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ +|+|+||||+
T Consensus 164 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~ 243 (503)
T 1a4s_A 164 AWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCH
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCH
Confidence 999999999999999999999999999999999999999999999 99999999999338899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (543)
Q Consensus 256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 335 (543)
.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus 244 ~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 322 (503)
T 1a4s_A 244 PTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322 (503)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-------CCCceeeceEeeCCCCCCcccccccc
Q 009109 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-------EKQLKIAPTILLDVPDDSTIMKEEIF 406 (543)
Q Consensus 336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (543)
++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+|
T Consensus 323 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 402 (503)
T 1a4s_A 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF 402 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhcccc
Confidence 999999987 7899999999999999999999864 67999999764 35899999999999999999999999
Q ss_pred cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchH
Q 009109 407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK 486 (543)
Q Consensus 407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~ 486 (543)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.
T Consensus 403 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~ 480 (503)
T 1a4s_A 403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQ 480 (503)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTT
T ss_pred CceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchH
Confidence 999999999999999999999999999999999999999999999999999998765 467899999999999999999
Q ss_pred HHHHHhhhceEEEEec
Q 009109 487 FSFDAFSHKKAVLYRS 502 (543)
Q Consensus 487 ~~~~~~~~~k~v~~~~ 502 (543)
+++++|++.|+|+++.
T Consensus 481 ~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 481 ATVDYYSQLKTVIVEM 496 (503)
T ss_dssp GGGGGSEEEEEEEECC
T ss_pred HHHHHhcCceEEEEcc
Confidence 9999999999998753
No 18
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=7.8e-102 Score=826.78 Aligned_cols=465 Identities=25% Similarity=0.370 Sum_probs=435.6
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQ 96 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~---~w~~~~~~~R~~iL~ 96 (543)
.++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+ .|+.++..+|.++|+
T Consensus 20 ~~~~i~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~ 89 (500)
T 1o04_A 20 NQIFINN-EWHDAVSRKTFPTV--------NPSTGEVICQV-AEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLN 89 (500)
T ss_dssp CSEEETT-EEECCTTCCEEEEE--------ETTTTEEEEEE-ECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHH
T ss_pred cCeeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHH
Confidence 3689999 99998777777777 88899999666 99999999999999999999 899999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (543)
Q Consensus 97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i 176 (543)
+++++|++++++|++++++|+|||..++...|+..+++.++++++.+++|.+.. ... ..+...+++++|+|||++|
T Consensus 90 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I 165 (500)
T 1o04_A 90 RLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPI---DGDFFSYTRHEPVGVCGQI 165 (500)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECC---SSSEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eec---CCCceEEEEEecCCcEEEE
Confidence 999999999999999999999999998865699999999999999988875432 111 1234568899999999999
Q ss_pred cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.+..|++|+ ||+|+|||
T Consensus 166 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTG 245 (500)
T 1o04_A 166 IPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 245 (500)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEES
T ss_pred CCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 778899999997 99999999
Q ss_pred ChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109 254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (543)
Q Consensus 254 S~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~ 332 (543)
|+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus 246 S~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 324 (500)
T 1o04_A 246 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVA 324 (500)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccce
Q 009109 333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (543)
Q Consensus 333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (543)
+++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||
T Consensus 325 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 404 (500)
T 1o04_A 325 RAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPV 404 (500)
T ss_dssp HHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceE
Confidence 999999999987 6799999999999999999999865 67999999764 36899999999999999999999999999
Q ss_pred eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489 (543)
Q Consensus 410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~ 489 (543)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++
T Consensus 405 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl 482 (500)
T 1o04_A 405 MQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGL 482 (500)
T ss_dssp EEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGG
T ss_pred EEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHH
Confidence 999999999999999999999999999999999999999999999999998764 457899999999999999999999
Q ss_pred HHhhhceEEEEe
Q 009109 490 DAFSHKKAVLYR 501 (543)
Q Consensus 490 ~~~~~~k~v~~~ 501 (543)
++|++.|+|.++
T Consensus 483 ~~f~~~K~v~~~ 494 (500)
T 1o04_A 483 QAYTEVKTVTVK 494 (500)
T ss_dssp GGGEEEEEEEEE
T ss_pred HHhcceEEEEEe
Confidence 999999999875
No 19
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=2.2e-101 Score=823.42 Aligned_cols=465 Identities=25% Similarity=0.363 Sum_probs=435.7
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQ 96 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~---~w~~~~~~~R~~iL~ 96 (543)
.++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+ .|+.++..+|.++|+
T Consensus 21 ~~~~i~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~ 90 (501)
T 1bxs_A 21 TKIFINN-EWHSSVSGKKFPVF--------NPATEEKLCEV-EEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLN 90 (501)
T ss_dssp CSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHH
T ss_pred cCeeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHH
Confidence 4689999 99998777777777 88899999666 99999999999999999999 899999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (543)
Q Consensus 97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i 176 (543)
+++++|++++++|++++++|+|||+.++...|+..+++.++++++.+++|.+.. ... ..+...+++++|+|||++|
T Consensus 91 ~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I 166 (501)
T 1bxs_A 91 KLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQI 166 (501)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe-eec---cCCcceeEEecCCceEEEE
Confidence 999999999999999999999999998866699999999999999998876532 111 2234568999999999999
Q ss_pred cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|||
T Consensus 167 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTG 246 (501)
T 1bxs_A 167 IPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 246 (501)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 778899999997 99999999
Q ss_pred ChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109 254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (543)
Q Consensus 254 S~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~ 332 (543)
|+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus 247 S~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 325 (501)
T 1bxs_A 247 STEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVE 325 (501)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccce
Q 009109 333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (543)
Q Consensus 333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (543)
+++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||
T Consensus 326 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 405 (501)
T 1bxs_A 326 RAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPV 405 (501)
T ss_dssp HHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccce
Confidence 999999999987 6799999999999999999999865 67999999764 46899999999999999999999999999
Q ss_pred eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489 (543)
Q Consensus 410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~ 489 (543)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++
T Consensus 406 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l 483 (501)
T 1bxs_A 406 QQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGF 483 (501)
T ss_dssp EEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHH
T ss_pred EEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHH
Confidence 999999999999999999999999999999999999999999999999998754 457899999999999999999999
Q ss_pred HHhhhceEEEEe
Q 009109 490 DAFSHKKAVLYR 501 (543)
Q Consensus 490 ~~~~~~k~v~~~ 501 (543)
++|++.|+|.++
T Consensus 484 ~~f~~~K~v~~~ 495 (501)
T 1bxs_A 484 HEYTEVKTVTIK 495 (501)
T ss_dssp HTTEEEEEEEEE
T ss_pred HHhhCeeEEEEc
Confidence 999999999875
No 20
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-101 Score=824.32 Aligned_cols=464 Identities=25% Similarity=0.373 Sum_probs=434.6
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS 97 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~ 97 (543)
.++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+ .|+.+++.+|.++|++
T Consensus 9 ~~~~i~G-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~ 78 (495)
T 3b4w_A 9 DKLFIGG-KWTKPSTSDVIEVR--------CPATGEYVGKV-PMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAA 78 (495)
T ss_dssp SSEEETT-EEECCSSCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHH
T ss_pred cceeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHH
Confidence 4689999 99998777777777 88899999666 99999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 177 (543)
++++|++++++|++++++|+|||..+++..|+..+++.++++++.++++.+.. .+ ...+...++.++|+|||++|+
T Consensus 79 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~ 154 (495)
T 3b4w_A 79 AVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TR---TGSYGQSIVSREPVGVVGAIV 154 (495)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EE---EETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-cc---CCCCceEEEEEccCceEEEEC
Confidence 99999999999999999999999999974599999999999999888875432 11 112335689999999999999
Q ss_pred CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+.+|++|+ ||+|+||||+
T Consensus 155 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~ 234 (495)
T 3b4w_A 155 AWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSS 234 (495)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCH
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCH
Confidence 999999999999999999999999999999999999999999999 99999999999778899999996 9999999999
Q ss_pred HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (543)
Q Consensus 256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 335 (543)
++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus 235 ~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (495)
T 3b4w_A 235 AVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT 313 (495)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC---CCceeeceEeeCCCCCCccccccccccee
Q 009109 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (543)
Q Consensus 336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 410 (543)
++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.... .|+|++|||+.+++++|++++||+||||+
T Consensus 314 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 393 (495)
T 3b4w_A 314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVL 393 (495)
T ss_dssp HSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred hcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceE
Confidence 999999977 7799999999999999999999875 579999997643 68999999999999999999999999999
Q ss_pred eeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHH
Q 009109 411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFD 490 (543)
Q Consensus 411 ~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~ 490 (543)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|.+|++
T Consensus 394 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~ 470 (495)
T 3b4w_A 394 AIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVE 470 (495)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHH
T ss_pred EEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999874 4578999999999999999999999
Q ss_pred HhhhceEEEEe
Q 009109 491 AFSHKKAVLYR 501 (543)
Q Consensus 491 ~~~~~k~v~~~ 501 (543)
+|++.|+|+++
T Consensus 471 ~~~~~k~v~~~ 481 (495)
T 3b4w_A 471 HFTQQKSVLLP 481 (495)
T ss_dssp TTEEEEEEECC
T ss_pred HhcceeEEEEc
Confidence 99999999875
No 21
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.5e-101 Score=818.00 Aligned_cols=466 Identities=22% Similarity=0.348 Sum_probs=434.7
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|+++
T Consensus 6 ~~~~~i~g-~~~~~~~~~~~~v~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 75 (479)
T 2imp_A 6 QHPMYIDG-QFVTWRGDAWIDVV--------NPATEAVISRI-PDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKI 75 (479)
T ss_dssp ECCEEETT-EEECCCCSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 35689999 99988777777777 88899999766 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.+... +. ...+...++.++|+|||++|+|
T Consensus 76 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~I~P 151 (479)
T 2imp_A 76 SAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QS--DRPGENILLFKRALGVTTGILP 151 (479)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CC--SSTTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-cc--CCCCceeEEEEeccceEEEECC
Confidence 999999999999999999999999998 5999999999999988777654321 11 1123456899999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ +|+|+||||+
T Consensus 152 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~ 231 (479)
T 2imp_A 152 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 231 (479)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999 99999999999 456899999995 9999999999
Q ss_pred HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (543)
Q Consensus 256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 335 (543)
++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus 232 ~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 310 (479)
T 2imp_A 232 SAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQ 310 (479)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhcCCCCCC--CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceee
Q 009109 336 EFFGKNPME--SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (543)
Q Consensus 336 ~l~~g~~~~--~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 411 (543)
++++|||.+ ++++|||+++.+++++.++++++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++
T Consensus 311 ~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~ 390 (479)
T 2imp_A 311 AVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLP 390 (479)
T ss_dssp TCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEE
T ss_pred hcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEE
Confidence 999999986 6799999999999999999999865 6799999976 33689999999999999999999999999999
Q ss_pred eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109 412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA 491 (543)
Q Consensus 412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~ 491 (543)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++
T Consensus 391 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~ 468 (479)
T 2imp_A 391 VVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHE 468 (479)
T ss_dssp EEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHT
T ss_pred EEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764 5789999999999999999999999
Q ss_pred hhhceEEEEe
Q 009109 492 FSHKKAVLYR 501 (543)
Q Consensus 492 ~~~~k~v~~~ 501 (543)
|++.|+|+++
T Consensus 469 ~~~~k~v~~~ 478 (479)
T 2imp_A 469 YLQTQVVYLQ 478 (479)
T ss_dssp TEEEEEEEEE
T ss_pred hcCeeEEEec
Confidence 9999999764
No 22
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.3e-100 Score=812.00 Aligned_cols=451 Identities=44% Similarity=0.786 Sum_probs=417.1
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 009109 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143 (543)
Q Consensus 64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~ 143 (543)
.+.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++++.+
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999999999997679999999999999999
Q ss_pred hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhc
Q 009109 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223 (543)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~al 223 (543)
++|..+..........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al 174 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhC
Confidence 98876554332222234568899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcc
Q 009109 224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303 (543)
Q Consensus 224 P~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~ 303 (543)
|+|+||+|+|+.+.+..|+.|++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|
T Consensus 175 P~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~- 253 (469)
T 3sza_A 175 DKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF- 253 (469)
T ss_dssp CTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-
T ss_pred CcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-
Confidence 9999999999877788888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK 382 (543)
Q Consensus 304 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~-~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~ 382 (543)
.|+||.|++++|||||+++||+|+++|+++++++. |+|. +++++||++++.+++++.+++ +++++++||..+..
T Consensus 254 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~ 328 (469)
T 3sza_A 254 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAA 328 (469)
T ss_dssp GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETT
T ss_pred hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCC
Confidence 99999999999999999999999999999999985 6554 478999999999999999999 47899999987778
Q ss_pred CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCc
Q 009109 383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI 462 (543)
Q Consensus 383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~ 462 (543)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.
T Consensus 329 g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~ 408 (469)
T 3sza_A 329 TRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVI 408 (469)
T ss_dssp TTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSS
T ss_pred CceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCC--CCCcCCCCChHHHH
Q 009109 463 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGD--STTRYPPYTAEKQK 520 (543)
Q Consensus 463 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 520 (543)
.+...+.+||||+|.||+|+++|.+|+++||+.|+|++++.+.+ .+++||||+.+|.+
T Consensus 409 ~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 409 VHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp GGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 66677899999999999999999999999999999999876544 67999999987765
No 23
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=9.4e-101 Score=817.63 Aligned_cols=466 Identities=22% Similarity=0.347 Sum_probs=435.7
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++++++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++.++|.++|+++
T Consensus 9 ~~~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 78 (481)
T 3jz4_A 9 RQQALING-EWLDANNGEAIDVT--------NPANGDKLGSV-PKMGADETRAAIDAANRALPAWRALTAKERATILRNW 78 (481)
T ss_dssp CCSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHH
Confidence 36799999 99999888888888 88899999766 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|+++.++|++++++|+|||..+++. |+..+++.+++++....+..... . +....+...+++++|+|||++|+|
T Consensus 79 a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~~P~GVv~~I~P 154 (481)
T 3jz4_A 79 FNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDT-I--PGHQADKRLIVIKQPIGVTAAITP 154 (481)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEE-E--CCSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-c--cccCCCceEEEEEcCccEEEEECC
Confidence 9999999999999999999999999985 99999999999988766532211 1 111234567899999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus 155 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~ 234 (481)
T 3jz4_A 155 WNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGST 234 (481)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999999 678999999996 9999999999
Q ss_pred HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (543)
Q Consensus 256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 335 (543)
++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus 235 ~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (481)
T 3jz4_A 235 EIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMS 313 (481)
T ss_dssp HHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (543)
Q Consensus 336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 412 (543)
++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|
T Consensus 314 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 393 (481)
T 3jz4_A 314 KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPL 393 (481)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred hccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEE
Confidence 999999976 6799999999999999999999875 6799999976 446899999999999999999999999999999
Q ss_pred eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109 413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492 (543)
Q Consensus 413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~ 492 (543)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|
T Consensus 394 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~ 471 (481)
T 3jz4_A 394 FRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDY 471 (481)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHh
Confidence 999999999999999999999999999999999999999999999999765 568899999999999999999999999
Q ss_pred hhceEEEEe
Q 009109 493 SHKKAVLYR 501 (543)
Q Consensus 493 ~~~k~v~~~ 501 (543)
++.|+|++.
T Consensus 472 t~~k~v~~~ 480 (481)
T 3jz4_A 472 LEIKYMCIG 480 (481)
T ss_dssp EEEEEEEEE
T ss_pred hceeEEEEe
Confidence 999999864
No 24
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=9.6e-101 Score=821.98 Aligned_cols=466 Identities=23% Similarity=0.353 Sum_probs=435.2
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++.+++++ ||.||++++++ +.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus 26 ~~~~~i~G-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 95 (515)
T 2d4e_A 26 PALHFIAG-EFVPSESGETFPSL--------DPATNEVLGVA-ARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRI 95 (515)
T ss_dssp CBCEEETT-EEECCTTCCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccCeeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 35789999 99998777777777 88899999766 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.+.. .+. ...+...+++++|+|||++|+|
T Consensus 96 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVv~~I~P 171 (515)
T 2d4e_A 96 AELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDR-TFP--VDRDWLYYTVRVPAGPVGIITP 171 (515)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEE-ECC--BTTTEEEEEEEEECCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccc--CCCCceeEEEEecCCceEEECC
Confidence 999999999999999999999999998 699999999999999888765321 111 1123456889999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus 172 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~ 251 (515)
T 2d4e_A 172 WNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGET 251 (515)
T ss_dssp SSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred CCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcH
Confidence 99999999999999999999999999999999999999999999 99999999999 567899999995 9999999999
Q ss_pred HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (543)
Q Consensus 256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 335 (543)
.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus 252 ~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 330 (515)
T 2d4e_A 252 ETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERAR 330 (515)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC---------CCceeeceEeeCCCCCCcccccc
Q 009109 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE---------KQLKIAPTILLDVPDDSTIMKEE 404 (543)
Q Consensus 336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---------~g~~~~Ptvl~~~~~~~~~~~~E 404 (543)
++++|||.+ ++++||++++.+++++.++|+++.+ ++++++||..+. .|+|++|||+.+ +++|++++||
T Consensus 331 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eE 409 (515)
T 2d4e_A 331 AIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEE 409 (515)
T ss_dssp HCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSC
T ss_pred hcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhcc
Confidence 999999987 5899999999999999999999865 679999997643 699999999999 9999999999
Q ss_pred cccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcc
Q 009109 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH 484 (543)
Q Consensus 405 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~ 484 (543)
+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++
T Consensus 410 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~ 487 (515)
T 2d4e_A 410 IFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREG 487 (515)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBS
T ss_pred ccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999998754 5688999999999999999
Q ss_pred hHHHHHHhhhceEEEEec
Q 009109 485 GKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 485 g~~~~~~~~~~k~v~~~~ 502 (543)
|.+|+++|++.|+|+++.
T Consensus 488 G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 488 GTYALDFYTDLKTIALPL 505 (515)
T ss_dssp HHHHHHHHEEEEEEEEES
T ss_pred hHHHHHHhCceeEEEEcC
Confidence 999999999999998864
No 25
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.6e-100 Score=815.49 Aligned_cols=478 Identities=17% Similarity=0.242 Sum_probs=438.8
Q ss_pred cccchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhh
Q 009109 4 PSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSR 83 (543)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w 83 (543)
+.+.+|+. ++.....++|||| +|+. ++.+++++ ||.||++++.+ +.++.+|+++++++|++||+.|
T Consensus 10 ~~~~~~~~--~~~~~~~~~~i~g-~~~~--~~~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w 75 (500)
T 2j6l_A 10 PQYAWLKE--LGLREENEGVYNG-SWGG--RGEVITTY--------CPANNEPIARV-RQASVADYEETVKKAREAWKIW 75 (500)
T ss_dssp GGGGGGGG--GTCCSEEECEESS-SEEC--CSCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHh--cCCCCCCCceECC-EEec--CCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHh
Confidence 56778888 6677999999999 9994 56667766 88899999765 9999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcc
Q 009109 84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSA 163 (543)
Q Consensus 84 ~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (543)
+.++..+|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.++++.+.. .. ....+...
T Consensus 76 ~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~--~~~~~~~~ 151 (500)
T 2j6l_A 76 ADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPI-LP--SERSGHAL 151 (500)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBE-EC--CSSTTEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cc--ccCCCcee
Confidence 999999999999999999999999999999999999999996 599999999999998877653321 11 11122345
Q ss_pred eEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhh----h-cCCCceEeecCChHHH
Q 009109 164 EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED----Y-VDNSAVRVVEGAVAET 238 (543)
Q Consensus 164 ~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----a-lP~gvv~vv~g~~~~~ 238 (543)
+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+ + +|+|+||+|+|+.+.+
T Consensus 152 ~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g 231 (500)
T 2j6l_A 152 IEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIG 231 (500)
T ss_dssp EEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHH
T ss_pred EEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHH
Confidence 7889999999999999999999999999999999999999999999999999988765 4 9999999999987889
Q ss_pred HHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEE
Q 009109 239 SALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317 (543)
Q Consensus 239 ~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~ 317 (543)
+.|++|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 232 ~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl 310 (500)
T 2j6l_A 232 TAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARRLF 310 (500)
T ss_dssp HHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEE
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcEEE
Confidence 9999996 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCC
Q 009109 318 TTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDV 394 (543)
Q Consensus 318 V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~ 394 (543)
||+++||+|+++|+++++++++|||.+ ++++|||+++.+++++.++++++.+ ++++++||.. +..|+|++|||+.++
T Consensus 311 V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v 390 (500)
T 2j6l_A 311 IHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGL 390 (500)
T ss_dssp EETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESC
T ss_pred EcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECC
Confidence 999999999999999999999999987 7799999999999999999999875 6799999976 346899999999999
Q ss_pred CCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHH--hhccceeEEECCCcccCCCCCCCc
Q 009109 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFV--QNISAGGIVFNDTIVHTTVSSLPF 472 (543)
Q Consensus 395 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~~pf 472 (543)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ +++++|+|+||++.. ...+.+||
T Consensus 391 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~-~~~~~~Pf 469 (500)
T 2j6l_A 391 GHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTS-GAEIGGAF 469 (500)
T ss_dssp CTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTT-CCCTTSEE
T ss_pred CCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCc-cCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999 779999999998754 34578999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109 473 GGVGESGMGSYHGKFSFDAFSHKKAVLYR 501 (543)
Q Consensus 473 GG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 501 (543)
||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 470 GG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 470 GGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp CCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred CCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999874
No 26
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3e-100 Score=811.88 Aligned_cols=454 Identities=26% Similarity=0.428 Sum_probs=418.9
Q ss_pred eeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 009109 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM 101 (543)
Q Consensus 22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~ 101 (543)
+|||| +|+.+ ++ ++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++++
T Consensus 2 ~~I~G-~~~~~--~~-~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 68 (486)
T 3pqa_A 2 MFIDG-KWINR--ED-MDVI--------NPYSLEVIKKI-PALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQ 68 (486)
T ss_dssp --------CCC--CC-EEEE--------CTTTCCEEEEE-CCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHH
T ss_pred eeECC-EEecC--CC-eEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Confidence 69999 99986 44 7777 88899999765 9999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCch
Q 009109 102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181 (543)
Q Consensus 102 l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~ 181 (543)
|+++.++|++++++|+|||..+++. |+..+++.++++++.+++|.+.. .. ..+...+++++|+|||++|+||||
T Consensus 69 l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~-~~----~~~~~~~~~~~P~GVv~~I~PwN~ 142 (486)
T 3pqa_A 69 IKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEV-IP----SDDRLIFTRREPVGIVGAITPFNF 142 (486)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEE-EC----CTTEEEEEEEEECSEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCce-ec----CCCceeEEEEccccEEEEECCCch
Confidence 9999999999999999999999984 99999999999999998875432 11 124567899999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-----cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (543)
Q Consensus 182 P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-----lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS 254 (543)
|+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||
T Consensus 143 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS 222 (486)
T 3pqa_A 143 PLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGS 222 (486)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECC
Confidence 99999999999999999999999999999999999999988 99999999999 556799999996 999999999
Q ss_pred hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (543)
Q Consensus 255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 334 (543)
+++|+.|++.++ +||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++++
T Consensus 223 ~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 299 (486)
T 3pqa_A 223 SKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKA 299 (486)
T ss_dssp HHHHHHHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999887 8999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109 335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (543)
Q Consensus 335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 412 (543)
+++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. .|+|++|||+ +++++|++++||+||||++|
T Consensus 300 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v 376 (486)
T 3pqa_A 300 KVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPI 376 (486)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEE
T ss_pred HhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEE
Confidence 9999999976 6799999999999999999999875 6799999965 5899999999 99999999999999999999
Q ss_pred eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109 413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492 (543)
Q Consensus 413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~ 492 (543)
++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|
T Consensus 377 ~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f 454 (486)
T 3pqa_A 377 IRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEM 454 (486)
T ss_dssp EEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHT
T ss_pred EEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHh
Confidence 99999 9999999999999999999999999999999999999999998763 345899999999999999999999999
Q ss_pred hhceEEEEec
Q 009109 493 SHKKAVLYRS 502 (543)
Q Consensus 493 ~~~k~v~~~~ 502 (543)
++.|+|+++.
T Consensus 455 ~~~k~v~~~~ 464 (486)
T 3pqa_A 455 SNIKTIIISK 464 (486)
T ss_dssp EEEEEEEEEC
T ss_pred hceEEEEEcC
Confidence 9999998865
No 27
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.9e-100 Score=815.36 Aligned_cols=465 Identities=22% Similarity=0.356 Sum_probs=417.8
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a 99 (543)
.++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus 13 ~~~~I~G-~~~~~~~~~~~~~~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 82 (508)
T 3r64_A 13 TKHLIGG-QWVEGNSDRISTNI--------NPYDDSVIAES-KQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAA 82 (508)
T ss_dssp TSEEETT-EEECCCSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cceeECC-EEecCCCCCEEEeE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 4799999 99999888888888 88899999766 99999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (543)
Q Consensus 100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~ 179 (543)
++|+++.++|++++++|+|||..+++. |+..+++.++++++..+.+.+ ..+. ....+...+++++|+|||++|+||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~--~~~~-~~~~~~~~~~~~~P~GVv~~I~Pw 158 (508)
T 3r64_A 83 ELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG--RISP-SNTPGKENRVYRVAKGVVGVISPW 158 (508)
T ss_dssp HHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE--EEEC-CSSTTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC--cccc-cCCCCceeEEEEecceEEEEECCC
Confidence 999999999999999999999999986 999999999999876655322 1111 111235678999999999999999
Q ss_pred chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHH-HHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
|||+.+.++++++||++||+||+|||+.+|+++ .++++++.++ +|+|+||+|+| +.+.+++|++|+ +|+|+||||+
T Consensus 159 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~ 238 (508)
T 3r64_A 159 NFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGST 238 (508)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCH
T ss_pred cchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCH
Confidence 999999999999999999999999999999999 9999999999 99999999999 578999999996 9999999999
Q ss_pred HHHHHHHHHHhc--ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109 256 RVGRIVMAAAAK--HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (543)
Q Consensus 256 ~~g~~i~~~a~~--~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 333 (543)
++|+.|++.+++ ++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++
T Consensus 239 ~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 317 (508)
T 3r64_A 239 PVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEA 317 (508)
T ss_dssp HHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHH
Confidence 999999999998 99999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceee
Q 009109 334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (543)
Q Consensus 334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 411 (543)
++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 318 ~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 395 (508)
T 3r64_A 318 VKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLIS 395 (508)
T ss_dssp HHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred HHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEE
Confidence 99999999986 6799999999999999999999875 5799999976 689999999999999999999999999999
Q ss_pred eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109 412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA 491 (543)
Q Consensus 412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~ 491 (543)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++
T Consensus 396 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ 474 (508)
T 3r64_A 396 VLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEE 474 (508)
T ss_dssp EEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHH
T ss_pred EEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764 57889999999999999999999999
Q ss_pred hhhceEEEEec
Q 009109 492 FSHKKAVLYRS 502 (543)
Q Consensus 492 ~~~~k~v~~~~ 502 (543)
|++.|+|+++.
T Consensus 475 ft~~k~v~~~~ 485 (508)
T 3r64_A 475 FTTDRWIGIKR 485 (508)
T ss_dssp TEEEEEEEEEC
T ss_pred hhceEEEEEec
Confidence 99999998875
No 28
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=8.9e-100 Score=812.57 Aligned_cols=467 Identities=24% Similarity=0.347 Sum_probs=437.7
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|+++
T Consensus 6 ~~~~~I~G-~~~~~~~~~~~~~~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 75 (490)
T 2ve5_A 6 EQKLYIGG-RYVEASSGATFETI--------NPANGEVLAKV-QRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRA 75 (490)
T ss_dssp CBCEECSS-SEECCSSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred cCCeeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 35799999 99999888888888 88899999766 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|+++.++|++++++|+|||..+++..|+..+++.++++++.++++... ... ...+...+++++|+|||++|+|
T Consensus 76 a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVv~~I~p 151 (490)
T 2ve5_A 76 VDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-QIP---LRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEE-EEE---EETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCc-ccc---CCCCceeeEeeccccEEEEECC
Confidence 999999999999999999999999997559999999999999988765322 111 1234567899999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~ 255 (543)
||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|+.|+ ||+|+||||+
T Consensus 152 wN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~ 231 (490)
T 2ve5_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCc
Confidence 99999999999999999999999999999999999999999999 99999999999 778999999997 9999999999
Q ss_pred HHHHHHHHHH-hcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109 256 RVGRIVMAAA-AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (543)
Q Consensus 256 ~~g~~i~~~a-~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 334 (543)
++|+.|++.+ ++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus 232 ~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 310 (490)
T 2ve5_A 232 STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERV 310 (490)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCccccccccc
Q 009109 335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFG 407 (543)
Q Consensus 335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (543)
+++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||
T Consensus 311 ~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 390 (490)
T 2ve5_A 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFG 390 (490)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeC
Confidence 9999999976 6799999999999999999999875 67999999762 368999999999999999999999999
Q ss_pred ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109 408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487 (543)
Q Consensus 408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~ 487 (543)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 391 Pvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~pfGG~k~SG~G~~~G~~ 468 (490)
T 2ve5_A 391 PVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLT 468 (490)
T ss_dssp SEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHH
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCCCCCCCCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999764 4688999999999999999999
Q ss_pred HHHHhhhceEEEEec
Q 009109 488 SFDAFSHKKAVLYRS 502 (543)
Q Consensus 488 ~~~~~~~~k~v~~~~ 502 (543)
++++|++.|+|+++.
T Consensus 469 ~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 469 TLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHHhheeEEEEEcc
Confidence 999999999998864
No 29
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=8.3e-100 Score=808.06 Aligned_cols=457 Identities=22% Similarity=0.331 Sum_probs=423.6
Q ss_pred cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (543)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~ 125 (543)
+.+.||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++
T Consensus 6 ~~~~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 6 YQSVNPYTNEAFASY-DNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CEEEETTTTEEEEEC-CCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred cceeCCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 455699999999765 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (543)
Q Consensus 126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps 205 (543)
.|+..+++.++++++.+++|.+..... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 599999999999999999987654321 134578999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEeecCCh-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282 (543)
Q Consensus 206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~ 282 (543)
+.+|+++.+|++++.++ +|+|+||+|+|+. +.++ |++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+
T Consensus 160 ~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 160 HNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238 (484)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEE
T ss_pred CCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcc
Confidence 99999999999999999 9999999999954 5567 99996 9999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA 361 (543)
Q Consensus 283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~ 361 (543)
||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.
T Consensus 239 iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~ 317 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLE 317 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999999999999999999986 67999999999999999
Q ss_pred HHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC
Q 009109 362 SLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD 439 (543)
Q Consensus 362 ~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~ 439 (543)
++|+++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 397 (484)
T 3ros_A 318 AQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS 397 (484)
T ss_dssp HHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECS
T ss_pred HHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECC
Confidence 99999875 6799999975 357999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCCCCCcCC
Q 009109 440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYP 512 (543)
Q Consensus 440 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~ 512 (543)
|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.......+.|.
T Consensus 398 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~~ 468 (484)
T 3ros_A 398 DIDRAKKVSAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKNNQAENLYF 468 (484)
T ss_dssp CHHHHHHHHHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGGGC-------
T ss_pred CHHHHHHHHHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCCCChhhhhee
Confidence 999999999999999999999653 57899999999999999999999999999999998764444444453
No 30
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.6e-99 Score=813.44 Aligned_cols=467 Identities=21% Similarity=0.328 Sum_probs=432.8
Q ss_pred ccceeeecceecccCCcccccccccCccccccCC-chhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~ 97 (543)
..++|||| +|+.+ +.+++++ ||. ||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 37 ~~~~~i~G-~~~~~--~~~~~~~--------nP~~t~~~i~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~ 104 (516)
T 1uzb_A 37 HYPLYIGG-EWVDT--KERMVSL--------NPSAPSEVVGTT-AKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLK 104 (516)
T ss_dssp EECEEETT-EEECC--SSEEEEE--------ETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred ccceeECC-EEecC--CCeEEEE--------CCCCCCcEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 34789999 99964 4566666 888 69999766 999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 177 (543)
++++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.++... . ....+...++.++|+|||++|+
T Consensus 105 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~P~GVv~~I~ 181 (516)
T 1uzb_A 105 AAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVE-V-VPYPGEDNESFYVPLGAGVVIA 181 (516)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCC-C-CCCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc-c-cCCCCceEEEEEeccceEEEEC
Confidence 9999999999999999999999999998 59999999999999999988764321 0 1112345688999999999999
Q ss_pred CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (543)
Q Consensus 178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS 254 (543)
|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.+.+|++|+ ||+|+||||
T Consensus 182 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS 261 (516)
T 1uzb_A 182 PWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGS 261 (516)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCC
Confidence 999999999999999999999999999999999999999999999 99999999999 678899999997 999999999
Q ss_pred hHHHHHHHHHHh------cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHH
Q 009109 255 PRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID 328 (543)
Q Consensus 255 ~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 328 (543)
+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|++
T Consensus 262 ~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~ 340 (516)
T 1uzb_A 262 LEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp HHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHH
Confidence 999999999998 789999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECccc-CCCCceeeceEeeCCCCCCccccccccc
Q 009109 329 SLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFG 407 (543)
Q Consensus 329 ~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (543)
+|+++++++++|||++++++|||+++.+++++.++++++.+.+++++||.. +..|+|++|||+.+++++|++++||+||
T Consensus 341 ~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 420 (516)
T 1uzb_A 341 RVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFG 420 (516)
T ss_dssp HHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCS
T ss_pred HHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccC
Confidence 999999999999994378999999999999999999998776689999976 3469999999999999999999999999
Q ss_pred ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cchH
Q 009109 408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGK 486 (543)
Q Consensus 408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~ 486 (543)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+...+.+||||+|.||+|+ .+|.
T Consensus 421 PVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~ 500 (516)
T 1uzb_A 421 PVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGAL 500 (516)
T ss_dssp SEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSH
T ss_pred ceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchH
Confidence 999999999999999999999999999999999999999999999999999997766667889999999999995 6889
Q ss_pred HHHHHhhhceEEEEe
Q 009109 487 FSFDAFSHKKAVLYR 501 (543)
Q Consensus 487 ~~~~~~~~~k~v~~~ 501 (543)
+++++|++.|+|+++
T Consensus 501 ~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 501 DYLRLFLEMKAVAER 515 (516)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHHcCCeeEEEec
Confidence 999999999999763
No 31
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=8.1e-100 Score=810.24 Aligned_cols=463 Identities=24% Similarity=0.383 Sum_probs=431.6
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a 99 (543)
.++|||| +|+.+. .+++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus 13 ~~~~i~g-~~~~~~--~~~~~~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 80 (487)
T 2w8n_A 13 TDSFVGG-RWLPAA--ATFPVQ--------DPASGAALGMV-ADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWY 80 (487)
T ss_dssp CSEEETT-EEECCS--CEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cCeeECC-EEecCC--CeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 5789999 999774 566666 88899999666 99999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (543)
Q Consensus 100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~ 179 (543)
++|++++++|++++++|+|||..+++. |+..+++.++++++.++++.. +.... ...+...+++++|+|||++|+||
T Consensus 81 ~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~Pw 156 (487)
T 2w8n_A 81 NLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPW 156 (487)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecceEEEEECCC
Confidence 999999999999999999999999985 999999999999998877432 21111 12345678999999999999999
Q ss_pred chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeec---C-ChHHHHHHHhCC-CCEEEEeC
Q 009109 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVE---G-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~---g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
|||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+ | +.+.++.|++|+ +|+|+|||
T Consensus 157 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTG 236 (487)
T 2w8n_A 157 NFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG 236 (487)
T ss_dssp SSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEE
T ss_pred cchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeC
Confidence 9999999999999999999999999999999999999999999 9999999999 8 677899999997 99999999
Q ss_pred ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (543)
Q Consensus 254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 333 (543)
|+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus 237 S~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 315 (487)
T 2w8n_A 237 STTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEA 315 (487)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCc-eeeceEeeCCCCCCcccccccccce
Q 009109 334 LKE-FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQL-KIAPTILLDVPDDSTIMKEEIFGPL 409 (543)
Q Consensus 334 ~~~-l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (543)
+++ +++|||.+ ++++||++++.+++++.++++++.+ ++++++||..+..|+ |++|||+.+++++|++++||+||||
T Consensus 316 ~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPV 395 (487)
T 2w8n_A 316 MKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPL 395 (487)
T ss_dssp HHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSE
T ss_pred HHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccce
Confidence 999 99999986 6799999999999999999999875 579999998755688 9999999999999999999999999
Q ss_pred eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489 (543)
Q Consensus 410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~ 489 (543)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+|+
T Consensus 396 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l 473 (487)
T 2w8n_A 396 APVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGI 473 (487)
T ss_dssp EEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGG
T ss_pred EEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHH
Confidence 9999999999999999999999999999999999999999999999999998763 46799999999999999999999
Q ss_pred HHhhhceEEEEe
Q 009109 490 DAFSHKKAVLYR 501 (543)
Q Consensus 490 ~~~~~~k~v~~~ 501 (543)
++|++.|+|+.+
T Consensus 474 ~~f~~~k~v~~~ 485 (487)
T 2w8n_A 474 DEYLELKYVCYG 485 (487)
T ss_dssp GGGEEEEEEEEC
T ss_pred HHhcCccEEEEe
Confidence 999999999864
No 32
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-99 Score=809.32 Aligned_cols=467 Identities=21% Similarity=0.325 Sum_probs=412.8
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~ 98 (543)
..++|||| +|+.+.++++++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|+++
T Consensus 6 ~~~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 75 (485)
T 4dng_A 6 LNKSFING-KWTGGESGRTEDIL--------NPYDQSVITTA-SLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKA 75 (485)
T ss_dssp CCSEEETT-EEECCSSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 45799999 99999888888888 88899999766 9999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (543)
+++|+++.++|++++++|+|||+.+++. |+..+++.++++++..+.. .+..... ....+...+++++|+|||++|+|
T Consensus 76 a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~-~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~P 152 (485)
T 4dng_A 76 RGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGEL-GGVKEVP-SDIEGKTNKIYRLPLGVISSISP 152 (485)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGC-SCEECCC-CSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHh-CCeeccc-cCCCCceEEEEEecceEEEEECC
Confidence 9999999999999999999999999986 9999999999999987653 2222111 11223567899999999999999
Q ss_pred CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHH-HHHHHHHhhh-cCCCceEeecCC-hHHHHHHHhCC-CCEEEEeCC
Q 009109 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGS 254 (543)
Q Consensus 179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~a-lP~gvv~vv~g~-~~~~~~L~~~~-v~~v~ftGS 254 (543)
||||+.+.++++++||++||+||+|||+.+|+++ .++++++.++ +|+|+||+|+|+ .+.++.|++|+ +|+|+||||
T Consensus 153 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS 232 (485)
T 4dng_A 153 FNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGS 232 (485)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEEC
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECC
Confidence 9999999999999999999999999999999999 9999999999 999999999995 45899999996 999999999
Q ss_pred hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (543)
Q Consensus 255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 334 (543)
+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++++
T Consensus 233 ~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 311 (485)
T 4dng_A 233 TAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARV 311 (485)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109 335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (543)
Q Consensus 335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 412 (543)
+++++|+|.+ .+++||++++.+++++.++++++.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|
T Consensus 312 ~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v 389 (485)
T 4dng_A 312 KQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATI 389 (485)
T ss_dssp HHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEE
T ss_pred HhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEE
Confidence 9999999986 6799999999999999999999875 6799999976 6899999999999999999999999999999
Q ss_pred eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109 413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492 (543)
Q Consensus 413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~ 492 (543)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|++||.+++++|
T Consensus 390 ~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~ 468 (485)
T 4dng_A 390 IKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEF 468 (485)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHH
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998754 578899999999999999999999999
Q ss_pred hhceEEEEec
Q 009109 493 SHKKAVLYRS 502 (543)
Q Consensus 493 ~~~k~v~~~~ 502 (543)
++.|+|+++.
T Consensus 469 t~~k~v~~~~ 478 (485)
T 4dng_A 469 TVTKWISIQK 478 (485)
T ss_dssp EEEEEEEEEC
T ss_pred hceEEEEEec
Confidence 9999998864
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=8.4e-100 Score=812.08 Aligned_cols=472 Identities=21% Similarity=0.355 Sum_probs=433.0
Q ss_pred ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHH
Q 009109 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRKTKSYEWRMSQIQS 97 (543)
Q Consensus 19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~-~w~~~~~~~R~~iL~~ 97 (543)
..++|||| +|+.+. .+++++ ||.||++++.+ +.++.+|+++|+++|++||+ .|+.++..+|.++|++
T Consensus 18 ~~~~~i~g-~~~~~~--~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~ 85 (501)
T 1uxt_A 18 VYPSYLAG-EWGGSG--QEIEVK--------SPIDLATIAKV-ISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRK 85 (501)
T ss_dssp EECEECSS-SEECCS--CEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHH
T ss_pred ccceeECC-EEecCC--CeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence 45799999 999873 566666 88899999666 99999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCC--CCcceEEeecceEEEE
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY--PSSAEIISEPLGVVLV 175 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~ 175 (543)
++++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.. +..+...... +...+++++|+|||++
T Consensus 86 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 163 (501)
T 1uxt_A 86 AADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAA 163 (501)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEE
Confidence 9999999999999999999999999998 5999999999999988887643 2111110011 2256899999999999
Q ss_pred EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeC
Q 009109 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftG 253 (543)
|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ +|+|+|||
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTG 243 (501)
T 1uxt_A 164 ITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG 243 (501)
T ss_dssp ECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEES
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeC
Confidence 99999999999999999999999999999999999999999999999 99999999999558899999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (543)
Q Consensus 254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 333 (543)
|+++|+.|++.++ +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus 244 S~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 320 (501)
T 1uxt_A 244 STEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320 (501)
T ss_dssp CHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHH
Confidence 9999999999888 9999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCC-ceeeceEeeCCC---CCCccccccccc
Q 009109 334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQ-LKIAPTILLDVP---DDSTIMKEEIFG 407 (543)
Q Consensus 334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fg 407 (543)
++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. .| +|++|||+.+++ ++|++++||+||
T Consensus 321 ~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFG 398 (501)
T 1uxt_A 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFA 398 (501)
T ss_dssp HHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCS
T ss_pred HHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccC
Confidence 99999999986 7899999999999999999999875 5699999976 68 999999999999 999999999999
Q ss_pred ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109 408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487 (543)
Q Consensus 408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~ 487 (543)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++ +...+.+||||+|.||+|+++|.+
T Consensus 399 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~ 477 (501)
T 1uxt_A 399 PVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGY 477 (501)
T ss_dssp SEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTT
T ss_pred ceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHH
Confidence 9999999999999999999999999999999999999999999999999999874 346788999999999999999999
Q ss_pred HHHHhhhceEEEEecCCCCCCCcC
Q 009109 488 SFDAFSHKKAVLYRSFNGDSTTRY 511 (543)
Q Consensus 488 ~~~~~~~~k~v~~~~~~~~~~~~~ 511 (543)
++++|++.|+|+++. .....++|
T Consensus 478 ~l~~f~~~k~v~~~~-~~~~~~~~ 500 (501)
T 1uxt_A 478 AVEAVTAYKTIVFNY-KGKGVWKY 500 (501)
T ss_dssp THHHHEEEEEEEEEC-TTSSSSSC
T ss_pred HHHHhCceeEEEEec-CCCccccc
Confidence 999999999998864 23445554
No 34
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-99 Score=808.31 Aligned_cols=461 Identities=24% Similarity=0.408 Sum_probs=411.7
Q ss_pred cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (543)
Q Consensus 18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~ 97 (543)
...++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus 6 ~~~~~~i~G-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 75 (478)
T 3ty7_A 6 DYTKQYING-EWVESNSNETIEVI--------NPATEEVIGKV-AKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDK 75 (478)
T ss_dssp ECCEEEETT-EEEECSSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred hhhhheECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 457899999 99999888888888 88899999766 999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (543)
Q Consensus 98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 177 (543)
++++|+++.++|++++++|+|||..+++..|+..+++.++++++.++++.... .+...+++++|+|||++|+
T Consensus 76 ~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~ 147 (478)
T 3ty7_A 76 IVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLIT 147 (478)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEEC
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEEC
Confidence 99999999999999999999999999955699999999999999988865422 1245788999999999999
Q ss_pred CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (543)
Q Consensus 178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS 254 (543)
|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||
T Consensus 148 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS 227 (478)
T 3ty7_A 148 PWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGS 227 (478)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSC
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999999 99999999999 668999999996 999999999
Q ss_pred hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (543)
Q Consensus 255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 334 (543)
+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus 228 ~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 306 (478)
T 3ty7_A 228 GPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQF 306 (478)
T ss_dssp HHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-C---CCCceeeceEeeCCCCCCcccccccccc
Q 009109 335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-D---EKQLKIAPTILLDVPDDSTIMKEEIFGP 408 (543)
Q Consensus 335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 408 (543)
+++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. + ..|+|++|||+.+++++|++++||+|||
T Consensus 307 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGP 386 (478)
T 3ty7_A 307 SQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGP 386 (478)
T ss_dssp HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECc
Confidence 9999999987 6799999999999999999999864 7899999943 2 3689999999999999999999999999
Q ss_pred eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109 409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS 488 (543)
Q Consensus 409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~ 488 (543)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ . ...+.+||||+|.||+|+++|.+|
T Consensus 387 vl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~ 463 (478)
T 3ty7_A 387 VMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYG 463 (478)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C--C----------------------C
T ss_pred eeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHH
Confidence 9999999999999999999999999999999999999999999999999998 2 356789999999999999999999
Q ss_pred HHHhhhceEEEE
Q 009109 489 FDAFSHKKAVLY 500 (543)
Q Consensus 489 ~~~~~~~k~v~~ 500 (543)
+++||+.|+|+.
T Consensus 464 l~~~t~~k~v~~ 475 (478)
T 3ty7_A 464 IEEFLEVKSIAG 475 (478)
T ss_dssp CGGGEEEEEEET
T ss_pred HHHhcCeEEEEE
Confidence 999999999873
No 35
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.3e-99 Score=803.61 Aligned_cols=458 Identities=23% Similarity=0.380 Sum_probs=427.3
Q ss_pred ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (543)
Q Consensus 21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~ 100 (543)
++|||| +|+.+.+ +++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|+++++
T Consensus 6 ~~~i~g-~~~~~~~--~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 73 (475)
T 1euh_A 6 KNYVNG-EWKLSEN--EIKIY--------EPASGAELGSV-PAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVAD 73 (475)
T ss_dssp CEEETT-EEECCSS--EEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred ceeECC-EEecCCC--ceEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Confidence 689999 9998744 66666 88899999766 999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCC----Ccc-eEEeecceEEEE
Q 009109 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYP----SSA-EIISEPLGVVLV 175 (543)
Q Consensus 101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~ 175 (543)
+|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.+.. .... ..+ ... ++.++|+|||++
T Consensus 74 ~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~ 149 (475)
T 1euh_A 74 ILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLA 149 (475)
T ss_dssp HHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEE
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEE
Confidence 9999999999999999999999997 599999999999999888765432 1111 123 355 899999999999
Q ss_pred EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCC-hHHHHHHHhCC-CCEEEEe
Q 009109 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYT 252 (543)
Q Consensus 176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~-~~~~~~L~~~~-v~~v~ft 252 (543)
|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|++|+ +|+|+||
T Consensus 150 I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fT 229 (475)
T 1euh_A 150 ISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFT 229 (475)
T ss_dssp ECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred ECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999 999999999995 56899999996 9999999
Q ss_pred CChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (543)
Q Consensus 253 GS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~ 332 (543)
||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus 230 GS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 306 (475)
T 1euh_A 230 GSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIRE 306 (475)
T ss_dssp SCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHH
Confidence 99999999999887 8999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceee
Q 009109 333 ELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (543)
Q Consensus 333 ~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 411 (543)
+++++++|||.+++++||++++.+++++.++++++.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 307 ~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~ 384 (475)
T 1euh_A 307 KVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLP 384 (475)
T ss_dssp HHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred HHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEE
Confidence 9999999999888899999999999999999999865 5799999876 589999999999999999999999999999
Q ss_pred eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECC-CcccCCCCCCCcccCCCCCCCCcchHHHHH
Q 009109 412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND-TIVHTTVSSLPFGGVGESGMGSYHGKFSFD 490 (543)
Q Consensus 412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~ 490 (543)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ +.. ..+.+||||+|.||+|+++|.+|++
T Consensus 385 v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~ 462 (475)
T 1euh_A 385 IIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR--GTDNFPFLGAKKSGAGIQGVKYSIE 462 (475)
T ss_dssp EEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCC--CSTTSCBCCEETTEESCBSHHHHHH
T ss_pred EEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCC--CCCCCCcCCCCCCCcCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999998 654 2678999999999999999999999
Q ss_pred HhhhceEEEEe
Q 009109 491 AFSHKKAVLYR 501 (543)
Q Consensus 491 ~~~~~k~v~~~ 501 (543)
+|++.|+|+++
T Consensus 463 ~~~~~k~v~~~ 473 (475)
T 1euh_A 463 AMTTVKSVVFD 473 (475)
T ss_dssp HTEEEEEEEEE
T ss_pred HhCCeeEEEEe
Confidence 99999999874
No 36
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-98 Score=801.45 Aligned_cols=466 Identities=22% Similarity=0.310 Sum_probs=430.7
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a 99 (543)
.++|||| +|+.+.++.+++++ ||.||++++.+ +.++.+|+++|+++|++||+.|+.+|..+|.++|++++
T Consensus 6 ~~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 75 (486)
T 1t90_A 6 LKNYING-EWVESKTDQYEDVV--------NPATKEVLCQV-PISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQ 75 (486)
T ss_dssp CCEEETT-EEECCSCSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cceeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 4689999 99988777778777 88899999666 99999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (543)
Q Consensus 100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~ 179 (543)
++|++++++|++++++|+|||..++. .|+..+++.+++++...+. ..++.... ...+...+++++|+|||++|+||
T Consensus 76 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~-~~g~~~~~--~~~~~~~~~~~~P~GVV~~I~Pw 151 (486)
T 1t90_A 76 QLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSL-MMGDSLAS--IATDVEAANYRYPIGVVGGIAPF 151 (486)
T ss_dssp HHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHH-HCEEEEEE--EETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH-hcCccccc--CCCCceeEEEecccCEEEEECCC
Confidence 99999999999999999999999997 5999999999998865443 33222111 11234568899999999999999
Q ss_pred chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHH
Q 009109 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV 257 (543)
Q Consensus 180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~ 257 (543)
|||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+..|++|+ +|+|+||||+++
T Consensus 152 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~ 231 (486)
T 1t90_A 152 NFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPV 231 (486)
T ss_dssp SCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHH
T ss_pred chhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999999 99999999999878899999997 999999999999
Q ss_pred HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCE-EEEeCCcHHHHHHHHHHHHHh
Q 009109 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY-IITTKDFAPKLIDSLRNELKE 336 (543)
Q Consensus 258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~ 336 (543)
|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++| ||||++ ||+|+++|++++++
T Consensus 232 g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~ 309 (486)
T 1t90_A 232 GEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVAD 309 (486)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 999999999999 999999 99999999999999
Q ss_pred hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC--CCCceeeceEeeCCCCCCcccccccccceeee
Q 009109 337 FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (543)
Q Consensus 337 l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 412 (543)
+++|+|.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|
T Consensus 310 ~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v 389 (486)
T 1t90_A 310 IKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSV 389 (486)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred cccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEE
Confidence 99999976 6799999999999999999998864 67999999742 36899999999999999999999999999999
Q ss_pred eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC--CcchHHHHH
Q 009109 413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSFD 490 (543)
Q Consensus 413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~ 490 (543)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ...+.+||||+|.||+| +++|.+|++
T Consensus 390 ~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~g~~g~~ 468 (486)
T 1t90_A 390 IRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVP-APMAFFPFSGWKSSFFGTLHANGKDSVD 468 (486)
T ss_dssp EEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCCTTSCCCCEETTEESSSCSSHHHHHH
T ss_pred EEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCCcCCCCcCCCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999999998643 34578999999999999 899999999
Q ss_pred HhhhceEEEEec
Q 009109 491 AFSHKKAVLYRS 502 (543)
Q Consensus 491 ~~~~~k~v~~~~ 502 (543)
+|++.|+|+.+.
T Consensus 469 ~~~~~k~v~~~~ 480 (486)
T 1t90_A 469 FYTRKKVVTARY 480 (486)
T ss_dssp HTEEEEEEEEEC
T ss_pred HhhceEEEEEec
Confidence 999999998764
No 37
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.6e-97 Score=787.87 Aligned_cols=448 Identities=33% Similarity=0.589 Sum_probs=409.7
Q ss_pred cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (543)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~ 125 (543)
....||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++
T Consensus 8 ~~~~~~~~~~~i~~v-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 86 (457)
T 3lns_A 8 HHHSSGHIDDDDKHM-NYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD 86 (457)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccccCCCCCCeeeec-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 445699999999766 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (543)
Q Consensus 126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps 205 (543)
..|+..+++.++++++.+++|.+++.........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 166 (457)
T 3lns_A 87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS 166 (457)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 66999999999999999999887543332222234578899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhhcCCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109 206 EIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (543)
Q Consensus 206 ~~~p~~~~~l~~~l~~alP~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~ 285 (543)
+.+|+++.++++++.+++|+|+||+|+|+.+.+.+|+++++|+|+||||+++|+.|++.+++++||+++|||||||+||+
T Consensus 167 ~~tp~t~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~ 246 (457)
T 3lns_A 167 ETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVL 246 (457)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEEC
T ss_pred CCChHHHHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeEC
Confidence 99999999999999999999999999998889999998679999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009109 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365 (543)
Q Consensus 286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~ 365 (543)
+|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||++++.+++++.++++
T Consensus 247 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~ 321 (457)
T 3lns_A 247 PDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLE 321 (457)
T ss_dssp TTCCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999988 5556 9999999999999999999
Q ss_pred hhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHc-CCCCcEEEEecCCHHHH
Q 009109 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS-KPKPLAAYFFSDDEQMK 444 (543)
Q Consensus 366 ~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~i~t~d~~~~ 444 (543)
++. +++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+.+
T Consensus 322 ~a~--~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a 399 (457)
T 3lns_A 322 ATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVA 399 (457)
T ss_dssp HCC--SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHH
T ss_pred hcC--CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHH
Confidence 863 699999987667999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109 445 KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501 (543)
Q Consensus 445 ~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 501 (543)
+++++++++|+|+||+++.+...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 400 ~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 400 KGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999987666678999999999999999999999999999999864
No 38
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.8e-97 Score=790.96 Aligned_cols=459 Identities=24% Similarity=0.307 Sum_probs=424.1
Q ss_pred cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (543)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~ 125 (543)
+.++||+||++++.+ +.++.+|+++||++|++||+.|++++.++|.++|++++++|++|+++|++++++|+||+..+ .
T Consensus 8 ~~v~nP~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-~ 85 (474)
T 4h7n_A 8 IEVRNPRTGKFDYVI-IPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT-V 85 (474)
T ss_dssp EEEECTTTCSEEEEE-CCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH-H
T ss_pred EeeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-H
Confidence 444499999999665 99999999999999999999999999999999999999999999999999999999998544 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (543)
Q Consensus 126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps 205 (543)
.|+..+++.+++++....++......... .........++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 86 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 86 -LEIDSFLASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred -HHHHHHHHHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 49999999999999988887765433221 123345678899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284 (543)
Q Consensus 206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV 284 (543)
+.+|.++..+.+++.++ +|+|++|+++|+.+.+..|+.| +|+|+||||+.+|+.|++.+++++||+++|||||||+||
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV 241 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIV 241 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCcccc
Confidence 99999999999999998 9999999999999999999977 999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 009109 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASL 363 (543)
Q Consensus 285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~ 363 (543)
++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+.+++.++
T Consensus 242 ~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 320 (474)
T 4h7n_A 242 LESANLELATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDH 320 (474)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999999999999999987 6799999999999999999
Q ss_pred HHhhhc-CCEEEECcccC--CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109 364 LDEDKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD 440 (543)
Q Consensus 364 i~~a~~-~~~v~~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d 440 (543)
++++.+ ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 321 i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 400 (474)
T 4h7n_A 321 ILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGS 400 (474)
T ss_dssp HHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSS
T ss_pred HHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCC
Confidence 999876 56888998764 468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhceEEEEecCCCCCCCcC
Q 009109 441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511 (543)
Q Consensus 441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~ 511 (543)
.++++++++++++|+|+||+.+.+...+.+||||+|.||+| +++|.+|+++|++.|+|+++......+++|
T Consensus 401 ~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 401 EDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp HHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred HHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99999999999999999999888777889999999999998 889999999999999999987544444444
No 39
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=5.7e-97 Score=785.91 Aligned_cols=449 Identities=22% Similarity=0.361 Sum_probs=423.1
Q ss_pred ccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchh
Q 009109 45 SFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (543)
Q Consensus 45 ~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea 124 (543)
++.+.||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..++
T Consensus 8 ~~~~~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 86 (462)
T 3etf_A 8 QALSVNPATGQTLAAM-PWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA 86 (462)
T ss_dssp CSEEECTTTCCEEEEC-CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred ccceECCCCCCEEEEe-cCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 3555599999999766 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeC
Q 009109 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 204 (543)
Q Consensus 125 ~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKp 204 (543)
+. |+..+++.++++++..+++..... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 87 ~~-ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 87 RA-EVTKSAALCDWYAEHGPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HH-HHHHHHHHHHHHHHhHHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 84 999999999999999888765431 1122446789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109 205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282 (543)
Q Consensus 205 s~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~ 282 (543)
|+.+|.++.++++++.++ +|+|+||+|+|+.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~ 241 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPF 241 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCcc
Confidence 999999999999999998 99999999999888899999996 9999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA 361 (543)
Q Consensus 283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~ 361 (543)
||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.
T Consensus 242 iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~ 320 (462)
T 3etf_A 242 IVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELH 320 (462)
T ss_dssp EECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999999999999999999976 67999999999999999
Q ss_pred HHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC
Q 009109 362 SLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD 439 (543)
Q Consensus 362 ~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~ 439 (543)
++++++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 321 ~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~ 400 (462)
T 3etf_A 321 QQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTA 400 (462)
T ss_dssp HHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECS
T ss_pred HHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECC
Confidence 99999875 6799999975 457999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEec
Q 009109 440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 440 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 502 (543)
|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 401 d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 401 DDTLAAEMAARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CHHHHHHHHHHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999999999999999999764 5688999999999999999999999999999998764
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=3e-97 Score=798.65 Aligned_cols=477 Identities=18% Similarity=0.214 Sum_probs=433.3
Q ss_pred cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (543)
Q Consensus 18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~ 96 (543)
...++|||| +|+.+.+ ++.++ ||.| |++++.+ +.++.+|+++||++|++||+.|+.++..+|.++|+
T Consensus 62 ~~~~~~I~G-~~~~~~~--~~~~~--------~P~~~~~~i~~~-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~ 129 (563)
T 4e3x_A 62 EAIPCVVGD-EEVWTSD--IQYQL--------SPFNHAHKVAKF-CYADKALLNRAIDAALAARKEWDLKPMADRAQVFL 129 (563)
T ss_dssp EECCEEETT-EEECCSC--EEEEE--------ETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred ccCCeEECC-EEeecCC--ceeee--------CCCCCCcEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 356799999 9998643 34444 7887 7888666 99999999999999999999999999999999999
Q ss_pred HHHHHHHHh-HHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109 97 SIANMIEEK-EEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV 175 (543)
Q Consensus 97 ~~a~~l~~~-~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 175 (543)
+++++|+++ +++|++++++|+|||..+++..|+..+++.++++++.++++...+.... ..+...++++.|+|||++
T Consensus 130 ~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~ 206 (563)
T 4e3x_A 130 KAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAA 206 (563)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEE
T ss_pred HHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEE
Confidence 999999999 9999999999999999999863499999999999999998866442211 112335667778899999
Q ss_pred EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT 252 (543)
Q Consensus 176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft 252 (543)
|+|||||+....+++++|| +||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||
T Consensus 207 I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FT 285 (563)
T 4e3x_A 207 ISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFT 285 (563)
T ss_dssp ECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEE
T ss_pred ECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEE
Confidence 9999999999999999999 599999999999999999999999999 99999999999 566899999996 9999999
Q ss_pred CChHHHHHHHHHHhcccCc------EEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHH
Q 009109 253 GSPRVGRIVMAAAAKHLTP------VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326 (543)
Q Consensus 253 GS~~~g~~i~~~a~~~~~~------~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f 326 (543)
||+++|+.|++.++++++| +++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|
T Consensus 286 GSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f 364 (563)
T 4e3x_A 286 GSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQI 364 (563)
T ss_dssp SCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHH
T ss_pred CCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHH
Confidence 9999999999999999885 9999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCC-CC-CCcccccCCHHHHHHHHHHHHhhhc--CCEEEECcccC-CCCceeeceEeeCCCCCCccc
Q 009109 327 IDSLRNELKEFFGKNP-ME-SKDLSRIVNPFHFARLASLLDEDKV--SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIM 401 (543)
Q Consensus 327 ~~~l~~~~~~l~~g~~-~~-~~~~gpli~~~~~~~~~~~i~~a~~--~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~ 401 (543)
+++|+++++++++||| .+ ++++||++++.+++++.++|+++++ ++++++||..+ ..|+|++|||+.+++++|+++
T Consensus 365 ~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~ 444 (563)
T 4e3x_A 365 KGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIM 444 (563)
T ss_dssp HHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGG
T ss_pred HHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhh
Confidence 9999999999999999 66 7799999999999999999999873 56999999764 479999999999999999999
Q ss_pred ccccccceeeeeccCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--ceeEEECCCcccCCCCCCCcccCC
Q 009109 402 KEEIFGPLLPIVTVEK--IEDSFDVI-KSKPKPLAAYFFSDDEQMKKEFVQNIS--AGGIVFNDTIVHTTVSSLPFGGVG 476 (543)
Q Consensus 402 ~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~i~t~d~~~~~~~~~~l~--~G~v~iN~~~~~~~~~~~pfGG~~ 476 (543)
+||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+++...+.+||||+|
T Consensus 445 ~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k 524 (563)
T 4e3x_A 445 KEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGAR 524 (563)
T ss_dssp TSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEE
T ss_pred cCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCcc
Confidence 9999999999999997 79999999 789999999999999999999999975 999999998776667889999999
Q ss_pred CCCCC-CcchHHHHHHhhhceEEEEecCCCCCCCcCC
Q 009109 477 ESGMG-SYHGKFSFDAFSHKKAVLYRSFNGDSTTRYP 512 (543)
Q Consensus 477 ~SG~G-~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~ 512 (543)
.||+| +.+|.+++++|++.|+|..+ +..+.+++||
T Consensus 525 ~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~yp 560 (563)
T 4e3x_A 525 ASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRYS 560 (563)
T ss_dssp TTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSCT
T ss_pred ccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccCC
Confidence 99998 89999999999999999875 4445566664
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.7e-94 Score=766.44 Aligned_cols=458 Identities=21% Similarity=0.320 Sum_probs=423.5
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a 99 (543)
.++|||| +|+.+. +.+++++ ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus 6 ~~~~I~G-~~~~~~-~~~~~~~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 74 (490)
T 3ju8_A 6 STHYIAG-QWLAGQ-GETLESL--------DPVGQGVVWSG-RGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFA 74 (490)
T ss_dssp CCEEETT-EEECCC-SCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cCceECC-EEecCC-CCeEEEE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 4899999 999874 4556666 88899999666 99999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (543)
Q Consensus 100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~ 179 (543)
++|++++++|++++++|+|||..+++ .|+..+++.++++++..+.+.+..... ..+...+++++|+|||++|+||
T Consensus 75 ~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~Pw 149 (490)
T 3ju8_A 75 ATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPY 149 (490)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCC
Confidence 99999999999999999999999998 599999999999999888765443211 1234567789999999999999
Q ss_pred chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHH
Q 009109 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV 257 (543)
Q Consensus 180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~ 257 (543)
|||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+++|++|+ +|+|+||||+++
T Consensus 150 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~ 229 (490)
T 3ju8_A 150 NFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRT 229 (490)
T ss_dssp SSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHH
T ss_pred cchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence 9999999999999999999999999999999999999999999 99999999999888999999996 999999999999
Q ss_pred HHHHHHHHhcccCcE-EEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCc-HHHHHHHHHHHHH
Q 009109 258 GRIVMAAAAKHLTPV-ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDSLRNELK 335 (543)
Q Consensus 258 g~~i~~~a~~~~~~~-~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~ 335 (543)
|+.|++.++++++|+ ++|+|||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++ ||+|+++|+++++
T Consensus 230 g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~ 308 (490)
T 3ju8_A 230 GNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSA 308 (490)
T ss_dssp HHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHH
Confidence 999999999999998 899999999999999999999999999999 9999999999999999996 9999999999999
Q ss_pred hhcCCC-CCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceee
Q 009109 336 EFFGKN-PME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (543)
Q Consensus 336 ~l~~g~-~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 411 (543)
++++|+ |.+ .+++||++++.+++++.++++++.+ ++++++||.. +..|+|++|||+. ++++|++++||+||||++
T Consensus 309 ~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~ 387 (490)
T 3ju8_A 309 TLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQ 387 (490)
T ss_dssp HCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEE
T ss_pred hccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEE
Confidence 999998 776 6799999999999999999999865 6799999865 3479999999999 999999999999999999
Q ss_pred eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109 412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA 491 (543)
Q Consensus 412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~ 491 (543)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|.||++ ++++
T Consensus 388 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~ 460 (490)
T 3ju8_A 388 VIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAPFGGIGASGNH------RPSA 460 (490)
T ss_dssp EEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS-CCCTTSEECCCGGGBSS------CCEE
T ss_pred EEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC-CCCCCCCcCCccccchh------HHHh
Confidence 9999999999999999999999999999999999999999999999999875 34578999999999975 4788
Q ss_pred hhhceEEEEec
Q 009109 492 FSHKKAVLYRS 502 (543)
Q Consensus 492 ~~~~k~v~~~~ 502 (543)
|++.|+|++..
T Consensus 461 ~~~~k~v~~~~ 471 (490)
T 3ju8_A 461 YYAADYCAYPV 471 (490)
T ss_dssp TTHHHHHEEEE
T ss_pred hheeEEEEEec
Confidence 99999887764
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2.1e-94 Score=816.31 Aligned_cols=468 Identities=18% Similarity=0.272 Sum_probs=435.8
Q ss_pred cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (543)
Q Consensus 18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~ 96 (543)
...++|||| +|+.+ +.+++++ ||.| |++++.+ +.++.+|+++|+++|++||+.|+.+|+.+|.++|+
T Consensus 530 ~~~~~~I~G-~~~~~--~~~~~v~--------nPa~~~~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~ 597 (1026)
T 4f9i_A 530 KTYPLFING-KEVRT--NDLIPTV--------NPNKPSEVLGQI-CQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLL 597 (1026)
T ss_dssp EEECEEETT-EEECC--SCEEEEE--------ETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cccCceECC-EEecC--CCcEEEe--------CCCCCCceEEEE-eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence 456799999 99864 5566666 7777 8888666 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (543)
Q Consensus 97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i 176 (543)
+++++|++++++|++++++|+|||..++.. |+..+++.+++++..++++........ ..+...++.++|+|||++|
T Consensus 598 ~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I 673 (1026)
T 4f9i_A 598 KAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVI 673 (1026)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEe
Confidence 999999999999999999999999999985 999999999999999988765432211 2345678899999999999
Q ss_pred cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (543)
Q Consensus 177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG 253 (543)
+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+|||
T Consensus 674 ~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTG 753 (1026)
T 4f9i_A 674 APWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTG 753 (1026)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCC
Confidence 9999999999999999999999999999999999999999999999 99999999999 567899999997 99999999
Q ss_pred ChHHHHHHHHHHh------cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHH
Q 009109 254 SPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI 327 (543)
Q Consensus 254 S~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~ 327 (543)
|+++|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++|+| .|+||.|++++|||||++++|+|+
T Consensus 754 St~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~ 832 (1026)
T 4f9i_A 754 SMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFI 832 (1026)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHH
T ss_pred CHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHH
Confidence 9999999999988 578999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC-CceeeceEeeCCCCCCccccccc
Q 009109 328 DSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK-QLKIAPTILLDVPDDSTIMKEEI 405 (543)
Q Consensus 328 ~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~-g~~~~Ptvl~~~~~~~~~~~~E~ 405 (543)
++|+++++++++|+|.+ ++++||+|++.+++++.++|+++++.+++++||..+.. |+|++|||+.+++++|++++||+
T Consensus 833 ~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEi 912 (1026)
T 4f9i_A 833 ERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEI 912 (1026)
T ss_dssp HHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCcee
Confidence 99999999999999987 67999999999999999999998875699999987555 99999999999999999999999
Q ss_pred ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cc
Q 009109 406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YH 484 (543)
Q Consensus 406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~ 484 (543)
||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+
T Consensus 913 FGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~g 992 (1026)
T 4f9i_A 913 FGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992 (1026)
T ss_dssp CSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBT
T ss_pred cCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999998877677899999999999995 57
Q ss_pred hHHHHHHhhhceEEEEec
Q 009109 485 GKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 485 g~~~~~~~~~~k~v~~~~ 502 (543)
|++++++|++.|+|.+..
T Consensus 993 G~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 993 GPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp STTTGGGGEEEEEEEEEC
T ss_pred CHHHHHHhceEEEEEEec
Confidence 899999999999998864
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=9.5e-94 Score=772.43 Aligned_cols=466 Identities=16% Similarity=0.230 Sum_probs=415.0
Q ss_pred cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHH
Q 009109 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSI 98 (543)
Q Consensus 20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A-~~~w~~~~~~~R~~iL~~~ 98 (543)
.++|||| +|+.+.+ .+++++ ||.||++++.+ +.++ +|+++|+++|++| |+.|+.++..+|.++|+++
T Consensus 8 ~~~~i~G-~~~~~~~-~~~~v~--------nP~tg~~i~~~-~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~ 75 (534)
T 2y53_A 8 LKNHVAG-QWIAGTG-AGITLT--------DPVTGVALVRV-SSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADI 75 (534)
T ss_dssp CCEEETT-EEECCSS-SCEEEE--------CTTTCCEEEEE-CCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred hhhEECC-EEecCCC-CeEEEE--------CCCCCCEEEEE-eCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHH
Confidence 4689999 9998754 356666 88899999776 7777 8999999999999 5999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCc---ccc-cCcCCCC-cceEEeecc-eE
Q 009109 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEK---AKT-SLTTYPS-SAEIISEPL-GV 172 (543)
Q Consensus 99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~-~~~~~~~P~-GV 172 (543)
+++|++++++|++++++|+|||..+++. |+..+++.+++++..++++..... ... .....+. ..++.++|+ ||
T Consensus 76 a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GV 154 (534)
T 2y53_A 76 VKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGV 154 (534)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSC
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCE
Confidence 9999999999999999999999999985 999999999999988766432111 000 1111111 357889997 99
Q ss_pred EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh--cCCCceEeecCChHHHHHHHhC--CCCE
Q 009109 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ--KWDK 248 (543)
Q Consensus 173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a--lP~gvv~vv~g~~~~~~~L~~~--~v~~ 248 (543)
|++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+|+.. .+.++ .+|+
T Consensus 155 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~ 231 (534)
T 2y53_A 155 ALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDV 231 (534)
T ss_dssp EEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCE
T ss_pred EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCE
Confidence 99999999999999999999999999999999999999999999999997 59999999998432 24443 4999
Q ss_pred EEEeCChHHHHHHHHHHh--cccCcEEEecCCCCcEEEcCCC-----CHHHHHHHHHHhhcccCCCCccccCCEEEEeCC
Q 009109 249 ILYTGSPRVGRIVMAAAA--KHLTPVILELGGKSPAVVDSTI-----NLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (543)
Q Consensus 249 v~ftGS~~~g~~i~~~a~--~~~~~~~lelgG~~p~iV~~da-----Dl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~ 321 (543)
|+||||+++|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++| .|+||.|++++|||||++
T Consensus 232 V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~ 310 (534)
T 2y53_A 232 VSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEA 310 (534)
T ss_dssp EEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGG
T ss_pred EEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEecc
Confidence 999999999999998875 8999999999999999999999 99999999999999 999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC-------CCCceeeceEeeC
Q 009109 322 FAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-------EKQLKIAPTILLD 393 (543)
Q Consensus 322 i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~-------~~g~~~~Ptvl~~ 393 (543)
+||+|+++|+++++++++|||.+ ++++|||+++.+++++.++|+++.+++++++||... ..|+|++|||+.+
T Consensus 311 i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~ 390 (534)
T 2y53_A 311 ALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVV 390 (534)
T ss_dssp GHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEEC
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEe
Confidence 99999999999999999999987 779999999999999999999986678999998642 3589999999999
Q ss_pred CCCC--CcccccccccceeeeeccC---CH-----HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--cceeEEECCC
Q 009109 394 VPDD--STIMKEEIFGPLLPIVTVE---KI-----EDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI--SAGGIVFNDT 461 (543)
Q Consensus 394 ~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l--~~G~v~iN~~ 461 (543)
++++ |++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++
T Consensus 391 v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~ 470 (534)
T 2y53_A 391 NDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISP 470 (534)
T ss_dssp SCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECG
T ss_pred cCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCC
Confidence 9977 6899999999999999999 99 999999999999999999999999999999999 8999999987
Q ss_pred ccc-------CCCCCCCcccCCCCCCCCc-chHHHHHHhhhceEEEEec
Q 009109 462 IVH-------TTVSSLPFGGVGESGMGSY-HGKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 462 ~~~-------~~~~~~pfGG~~~SG~G~~-~g~~~~~~~~~~k~v~~~~ 502 (543)
..+ ...+.+||||+|.||+|++ +|.+++++|++.|++...+
T Consensus 471 ~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 471 SVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp GGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred cccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 531 2357899999999999999 6999999999999988654
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-91 Score=754.45 Aligned_cols=467 Identities=18% Similarity=0.206 Sum_probs=413.9
Q ss_pred chhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 009109 7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (543)
Q Consensus 7 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~ 86 (543)
.|||..+. +-...++|||| +|+.+.+ + .||.||++++..++.++.+|+++|+++|++||+.|+.+
T Consensus 18 ~~~~~~~~-~~~~~~~~I~G-~~~~~~~-----v--------~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~ 82 (528)
T 3v4c_A 18 LYFQSMMI-FTPKGKHLVAG-EWLDGAG-----T--------FASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYS 82 (528)
T ss_dssp -----CCS-CCCCCCEEETT-EEECCSS-----E--------EECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhh-cccccCceECC-EEecCCC-----c--------cCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 57777554 44556899999 9998743 4 48999999973449999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh--hcCCCcccccC---cCCCC
Q 009109 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--WTKPEKAKTSL---TTYPS 161 (543)
Q Consensus 87 ~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~--~~~~~~~~~~~---~~~~~ 161 (543)
+..+|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.+++ |.......... ...+.
T Consensus 83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (528)
T 3v4c_A 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQ 161 (528)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCC
Confidence 999999999999999999999999999999999999997 4999999999999999887 44332110000 01223
Q ss_pred cceEEeecceEEEEEcCCchhhhhhh--hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh----hh-cCCCceEeecC-
Q 009109 162 SAEIISEPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG- 233 (543)
Q Consensus 162 ~~~~~~~P~GVv~~i~p~N~P~~~~~--~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~a-lP~gvv~vv~g- 233 (543)
..+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|+++.++++++. ++ +|+|+||+|+|
T Consensus 162 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~ 241 (528)
T 3v4c_A 162 EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGG 241 (528)
T ss_dssp CEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCC
T ss_pred cceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCC
Confidence 56889999999999999999999865 899999999999999999999999999999765 46 99999999999
Q ss_pred ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhccc--CcEEEecCCCCcEEEcCCC---CHHHHHHHHHHhhcccCCC
Q 009109 234 AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL--TPVILELGGKSPAVVDSTI---NLQVTTRRIIAGKWMANNG 307 (543)
Q Consensus 234 ~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~da---Dl~~aa~~iv~~~~~~~~G 307 (543)
+.+.+++|++|+ ||+|+||||+++|+.|++.+++++ ||+++|+|||||+||++|| |++.|++.+++++| .|+|
T Consensus 242 ~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~G 320 (528)
T 3v4c_A 242 SRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGAG 320 (528)
T ss_dssp CHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGG
T ss_pred CHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCC
Confidence 678999999996 999999999999999999999999 9999999999999999999 88999999999999 9999
Q ss_pred CccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCcee
Q 009109 308 QACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKI 386 (543)
Q Consensus 308 q~C~a~~~v~V~~~-i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~ 386 (543)
|.|++++|||||++ +||+|+++|++++++++.+ +.+||++++.+.+++.++++ .+++++++||.. .|+|+
T Consensus 321 Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~ 391 (528)
T 3v4c_A 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRDA 391 (528)
T ss_dssp CCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTEE
T ss_pred CccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCcee
Confidence 99999999999998 9999999999999988643 56999999888888888874 256799999975 79999
Q ss_pred eceEeeCCCCC---CcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHhhcc--ceeEEEC
Q 009109 387 APTILLDVPDD---STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD--DEQMKKEFVQNIS--AGGIVFN 459 (543)
Q Consensus 387 ~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~--d~~~~~~~~~~l~--~G~v~iN 459 (543)
+|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|+|+||
T Consensus 392 ~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN 471 (528)
T 3v4c_A 392 SPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVN 471 (528)
T ss_dssp CCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEES
T ss_pred ccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEc
Confidence 99999988887 899999999999999999999999999999999999999999 8999999999998 9999999
Q ss_pred CCccc-CCCCCCCccc-CCCCCCCCcc--hHHHHHHhhhceEEE
Q 009109 460 DTIVH-TTVSSLPFGG-VGESGMGSYH--GKFSFDAFSHKKAVL 499 (543)
Q Consensus 460 ~~~~~-~~~~~~pfGG-~~~SG~G~~~--g~~~~~~~~~~k~v~ 499 (543)
+++++ ...+.+|||| +|.||+|+++ |.+|+++|++.|++.
T Consensus 472 ~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 472 GFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp SCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence 97653 3468899999 9999999986 999999999999753
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.2e-88 Score=726.85 Aligned_cols=445 Identities=19% Similarity=0.225 Sum_probs=397.1
Q ss_pred cCCcccccccccCccccccCCchhhh-hhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009109 32 NQTHISFPYLSLTSFSCRCSATMAAE-EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII 110 (543)
Q Consensus 32 ~~~~~~~~~~~p~~~~~~~p~tg~~~-~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela 110 (543)
+.++.+++++ ||.||+++ +.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~--------nP~tg~~i~~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 73 (510)
T 1ez0_A 3 PQTDNVFYAT--------NAFTGEALPLAF-PVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDII 73 (510)
T ss_dssp --CCCEEEEE--------CTTTSSEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCeEEeE--------CCCCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3455556665 88899999 566 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh--hcCCCcccc-cCc-CCC-CcceEEeecceEEEEEcCCchhhhh
Q 009109 111 EAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--WTKPEKAKT-SLT-TYP-SSAEIISEPLGVVLVISTWNYPFLL 185 (543)
Q Consensus 111 ~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~-~~~-~~~~~~~~P~GVv~~i~p~N~P~~~ 185 (543)
+++++|+|||..++. .|+..+++.++++++.+++ |.+...... +.. ..+ ...+++++|+|||++|+|||||+.+
T Consensus 74 ~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 152 (510)
T 1ez0_A 74 ARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAF 152 (510)
T ss_dssp HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTT
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhh
Confidence 999999999999886 4999999999999999886 554221100 000 011 1357899999999999999999998
Q ss_pred hh--hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh----hh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChH
Q 009109 186 SL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPR 256 (543)
Q Consensus 186 ~~--~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~ 256 (543)
.+ +++++||++||+||+|||+.+|+++.++++++. ++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||++
T Consensus 153 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~ 232 (510)
T 1ez0_A 153 SAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVG 232 (510)
T ss_dssp STTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHH
T ss_pred hhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHH
Confidence 54 999999999999999999999999999999984 45 89999999999 678899999997 99999999999
Q ss_pred HHHHHHHHHhccc--CcEEEecCCCCcEEEcCCCCHH--HHHHHHHHhhcccCCCCccccCCEEEEeCC-cHHHHHHHHH
Q 009109 257 VGRIVMAAAAKHL--TPVILELGGKSPAVVDSTINLQ--VTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLR 331 (543)
Q Consensus 257 ~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~daDl~--~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~ 331 (543)
+|+.|++.+++++ ||+++|||||||+||++|||++ .|++.+++++| +|+||.|++++|||||++ +||+|+++|+
T Consensus 233 ~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~ 311 (510)
T 1ez0_A 233 GGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQ 311 (510)
T ss_dssp HHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHH
Confidence 9999999999986 9999999999999999999999 99999999999 999999999999999999 9999999999
Q ss_pred HHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc--CCEEEECcccCCCCceeeceEeeCCCCC---Ccccccccc
Q 009109 332 NELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV--SDKIVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIF 406 (543)
Q Consensus 332 ~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~--~~~v~~gg~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~f 406 (543)
+++++++ .||++++.+.+++.++++++.+ ++++++||. .|+|++|||+.+++++ |++++||+|
T Consensus 312 ~~~~~~~---------~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiF 379 (510)
T 1ez0_A 312 SLIRQQS---------PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIF 379 (510)
T ss_dssp HHHHHCC---------CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCC
T ss_pred HHHHhcC---------CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCcc
Confidence 9999987 3688899999999999988863 569999997 3999999999988777 999999999
Q ss_pred cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCH--HHHHHHHhhc--cceeEEECCCcccC-CCCCCCccc-CCCCCC
Q 009109 407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE--QMKKEFVQNI--SAGGIVFNDTIVHT-TVSSLPFGG-VGESGM 480 (543)
Q Consensus 407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~--~~~~~~~~~l--~~G~v~iN~~~~~~-~~~~~pfGG-~~~SG~ 480 (543)
|||++|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++..+. ..+.+|||| .|.||.
T Consensus 380 GPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~ 459 (510)
T 1ez0_A 380 GPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTH 459 (510)
T ss_dssp SSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSC
T ss_pred CCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999987 7899999999 79999999876432 356899999 788999
Q ss_pred CCc--chHHHHHHhhhceEEE
Q 009109 481 GSY--HGKFSFDAFSHKKAVL 499 (543)
Q Consensus 481 G~~--~g~~~~~~~~~~k~v~ 499 (543)
|+. +|.+|+++|++.|++.
T Consensus 460 g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 460 SASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCCccHHHHHHhheEEEEc
Confidence 854 8999999999988764
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.2e-87 Score=759.58 Aligned_cols=434 Identities=22% Similarity=0.353 Sum_probs=404.7
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHH
Q 009109 62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 141 (543)
Q Consensus 62 ~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~ 141 (543)
+.++.+|+++|+++|++||+.|+.+|+.+|.++|++++++|+++.++|++++++|+|||+.++. .|+..+++.+++++.
T Consensus 545 ~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 545 ADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHHH
Confidence 7799999999999999999999999999999999999999999999999999999999999997 499999999999999
Q ss_pred HHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhh
Q 009109 142 ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED 221 (543)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~ 221 (543)
..+++.+.... . ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 624 ~a~~~~g~~~~-~-~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~e 701 (1001)
T 3haz_A 624 QGRKLFGSETA-M-PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHE 701 (1001)
T ss_dssp HHHHHHSSCEE-C-CCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHhhcCcccc-c-cCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHH
Confidence 98887543211 1 112345678899999999999999999999999999999999999999999999999999999999
Q ss_pred h-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcc---cCcEEEecCCCCcEEEcCCCCHHHHHHH
Q 009109 222 Y-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTRR 296 (543)
Q Consensus 222 a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~daDl~~aa~~ 296 (543)
+ +|+|+||+|+|+.+.+..|++|+ ||+|+||||+++|+.|++.++++ ++|+++|+|||||+||++|||++.|++.
T Consensus 702 AGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~ 781 (1001)
T 3haz_A 702 AGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADD 781 (1001)
T ss_dssp HTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred hCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHH
Confidence 9 99999999999554499999997 99999999999999999998864 8999999999999999999999999999
Q ss_pred HHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEE
Q 009109 297 IIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVY 375 (543)
Q Consensus 297 iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~ 375 (543)
+++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|.+ ++++||++++.+.+++.++|+++.+++++ +
T Consensus 782 iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v-~ 859 (1001)
T 3haz_A 782 VVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL-H 859 (1001)
T ss_dssp HHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-E
T ss_pred HHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-e
Confidence 999999 99999999999999999999999999999999999999976 78999999999999999999998776688 9
Q ss_pred CcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccc
Q 009109 376 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453 (543)
Q Consensus 376 gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~ 453 (543)
||..+..|+|++|||+.+ +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+.++++++++++
T Consensus 860 gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~a 937 (1001)
T 3haz_A 860 FAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV 937 (1001)
T ss_dssp EECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCC
T ss_pred ccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCe
Confidence 988777799999999975 6788999999999999999996 799999999999999999999999999999999999
Q ss_pred eeEEECCCcccCCCCCCCcccCCCCCCCC-cchHHHHHHhhhceEEEEec
Q 009109 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 454 G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~~~~~k~v~~~~ 502 (543)
|+|+||+++.+...+.+||||+|.||+|+ .+|++++++|++.|+|+++.
T Consensus 938 G~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 938 GNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp SEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred eeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999998876667789999999999994 67899999999999998865
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-82 Score=670.44 Aligned_cols=417 Identities=20% Similarity=0.216 Sum_probs=336.0
Q ss_pred ccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CC
Q 009109 47 SCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL-------SK 119 (543)
Q Consensus 47 ~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~et-------Gk 119 (543)
-|+||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+ ||
T Consensus 10 ~~~~P~tg~~~~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk 88 (463)
T 2h5g_A 10 GVDLGTENLYFQSM-VKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred CCcCCCCCCEEEEe-cCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence 35699999999777 99999999999999999999999999999999999999999999999999999999 69
Q ss_pred Ccc----hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhh
Q 009109 120 PPF----ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195 (543)
Q Consensus 120 ~~~----ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALa 195 (543)
|+. ++. .|+..+++.++++++.++++.+.. ........+...++.++|+|||++|+||| |.... +++++||+
T Consensus 89 ~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 89 PLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred chhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 987 465 599999999999998888776543 11110012335688999999999999777 77666 89999999
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHhhhc----CCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccC
Q 009109 196 AGNAVVLKPSEIAPATSSLLAKLLEDYV----DNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLT 270 (543)
Q Consensus 196 aGN~VVlKps~~~p~~~~~l~~~l~~al----P~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~ 270 (543)
+||+||+|||+.+|+++.+|++++.+++ |+|+||+|+|+.+.++.|+.|+ ||+|+||||+.+|+.|++.++ +|
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999985 5999999999667899999997 999999999999999999888 89
Q ss_pred cEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccc
Q 009109 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 350 (543)
Q Consensus 271 ~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gp 350 (543)
|+++|||||||+||++|||++.|++.+++++| .| ||.|++++|||||+++|| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hH
Confidence 99999999999999999999999999999999 98 999999999999999998 23
Q ss_pred cCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCC
Q 009109 351 IVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429 (543)
Q Consensus 351 li~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 429 (543)
+ +++ +++++.+ +++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|+++
T Consensus 297 ~-----~~~---~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~ 360 (463)
T 2h5g_A 297 L-----FDQ---IIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYG 360 (463)
T ss_dssp H-----HHH---HHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHC
T ss_pred H-----HHH---HHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCC
Confidence 2 222 3555543 56887554433335443 57899999999999999999999999999999999
Q ss_pred CCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhceEEEEecCCC
Q 009109 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SY--HGKFSFDAFSHKKAVLYRSFNG 505 (543)
Q Consensus 430 ~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~~~~~~~~k~v~~~~~~~ 505 (543)
+||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| ++ +|.+|+++|++.|+|.++.
T Consensus 361 ~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~--- 435 (463)
T 2h5g_A 361 SSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK--- 435 (463)
T ss_dssp CSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS---
T ss_pred CCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC---
Confidence 9999999999999999999999999999998765 3678999999999999 76 8999999999999998864
Q ss_pred CCCCcCCCCChHHH
Q 009109 506 DSTTRYPPYTAEKQ 519 (543)
Q Consensus 506 ~~~~~~~p~~~~~~ 519 (543)
...+ |||+..|.
T Consensus 436 -~~~r-~~y~~~~~ 447 (463)
T 2h5g_A 436 -DHVV-SDFSEHGS 447 (463)
T ss_dssp -SCCG-GGGSTTSS
T ss_pred -Cccc-CCccccch
Confidence 2344 78886543
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.8e-81 Score=661.31 Aligned_cols=405 Identities=18% Similarity=0.224 Sum_probs=327.6
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc----chhhHHHHHH-HHHHHHHHHHH
Q 009109 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFISEISM-TKSSCKLALKE 142 (543)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~----~ea~~~Ev~~-~~~~l~~~~~~ 142 (543)
.+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||. .++...|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998 8886569999 99999999999
Q ss_pred HhhhcCCCc--ccc-cCc--CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHH
Q 009109 143 LKYWTKPEK--AKT-SLT--TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 217 (543)
Q Consensus 143 ~~~~~~~~~--~~~-~~~--~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 217 (543)
++++..... ... +.. ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 988864321 011 100 11335688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHh----h----h-cCCCceEeecCCh-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109 218 LLE----D----Y-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (543)
Q Consensus 218 ~l~----~----a-lP~gvv~vv~g~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 286 (543)
++. + + +|+|+||+|+ +. +.++.|+.|+ ||+|+||||+++|+.|++.+ +||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 54 6789999997 99999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 009109 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 363 (543)
Q Consensus 287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~---g~~~~~~~~gpli~~~~~~~~~~~ 363 (543)
|||++.|++.+++++| +|+| .|++++|||||+++ |+|+++|+++++++++ |||.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999986 66521 344
Q ss_pred -HHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009109 364 -LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ 442 (543)
Q Consensus 364 -i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~ 442 (543)
++++. ++++||+ | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 55544 3566775 4 789997 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceeEEECCCcccCCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhceEEEEecCCCCCCCcCCCCCh
Q 009109 443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFG-----GVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTA 516 (543)
Q Consensus 443 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~p~~~ 516 (543)
.++++++++++|+|+||++.. ..+.+||| |+|.||+|++ |.+|+++|++.|+|..+. ...+ |||+.
T Consensus 379 ~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~----~~~r-~py~~ 449 (468)
T 1vlu_A 379 NAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD----GQVA-SDYLG 449 (468)
T ss_dssp HHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECS----SCCS-CCC--
T ss_pred HHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC----CCcC-ccccc
Confidence 999999999999999998775 35788999 9999999999 999999999999998764 2445 89983
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=4.4e-79 Score=647.91 Aligned_cols=412 Identities=16% Similarity=0.212 Sum_probs=362.2
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHH
Q 009109 62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 141 (543)
Q Consensus 62 ~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~ 141 (543)
+.++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+||+..+++..+...+++.+.
T Consensus 7 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~---- 82 (464)
T 3k9d_A 7 DLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY---- 82 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH----
Confidence 3468899999999999999999999999999999999999999999999999999999999886545444444333
Q ss_pred HHhhhcCCCcc-cccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHH--
Q 009109 142 ELKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-- 218 (543)
Q Consensus 142 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~-- 218 (543)
.|++.... .......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 83 ---~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~ 159 (464)
T 3k9d_A 83 ---NYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159 (464)
T ss_dssp ---HHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred ---HhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence 33322211 111112355678899999999999999999999999999999999999999999999999886654
Q ss_pred --Hhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecC-CCCcEEEcCCCCHHH
Q 009109 219 --LEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG-GKSPAVVDSTINLQV 292 (543)
Q Consensus 219 --l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelg-G~~p~iV~~daDl~~ 292 (543)
+.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+. +++++++++||+ +|+| ||+|+||++|||++.
T Consensus 160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5677 99999999999 688999999997 99999999997 466778899999 7888 999999999999999
Q ss_pred HHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH-------HhhcCCCCC--CCCcccccCCHHHHHHHHHH
Q 009109 293 TTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-------KEFFGKNPM--ESKDLSRIVNPFHFARLASL 363 (543)
Q Consensus 293 aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~l~~g~~~--~~~~~gpli~~~~~~~~~~~ 363 (543)
|++.+++++| +|+||.|++++|||||+++||+|+++|+++. +.+++|+|. +++++||+++.++++++.++
T Consensus 235 Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 235 AVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999985 456677774 36789999999999999999
Q ss_pred HHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHH----HHHHcCCCCcEEEEec
Q 009109 364 LDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSF----DVIKSKPKPLAAYFFS 438 (543)
Q Consensus 364 i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~i~t 438 (543)
++.+.. ++++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||++||||
T Consensus 314 ~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t 379 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379 (464)
T ss_dssp TTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred hhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 988764 6799998853 567788865 89999999999999999997 7999999999999999
Q ss_pred CCHHHHHHHHhhccceeEEECCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109 439 DDEQMKKEFVQNISAGGIVFNDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501 (543)
Q Consensus 439 ~d~~~~~~~~~~l~~G~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 501 (543)
+|.+.++++++++++|+|+||+++.+ ...+.+|||| +.+|.|+++|..|+++|++.|+|...
T Consensus 380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999998764 2578999999 78999999999999999999999764
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=9.2e-77 Score=626.22 Aligned_cols=389 Identities=18% Similarity=0.240 Sum_probs=326.4
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc----chhhHH-------HHHHHHH
Q 009109 66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFIS-------EISMTKS 134 (543)
Q Consensus 66 ~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~----~ea~~~-------Ev~~~~~ 134 (543)
.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+||+. .++... |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 466532 6778888
Q ss_pred HHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHH
Q 009109 135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214 (543)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~ 214 (543)
.+++++...+. . ....+......+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 88877664332 1 11111100113456789999999999999998 8 6889999999999999999999999999999
Q ss_pred HHHHH----hhh-cCCCceEeecC-ChH-HHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109 215 LAKLL----EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (543)
Q Consensus 215 l~~~l----~~a-lP~gvv~vv~g-~~~-~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 286 (543)
+++++ .++ +|+|+||+|+| +.+ .+..|..|+ ||+|+||||+.+|+.+++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 567 99999999998 554 677777786 99999999999999998876 699999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 009109 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 363 (543)
Q Consensus 287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~---g~~~~~~~~gpli~~~~~~~~~~~ 363 (543)
|||++.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++++ |||. ..++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHHH
Confidence 9999999999999999 9999 9999999999999999999999999999987 6541 2456
Q ss_pred HHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 009109 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQM 443 (543)
Q Consensus 364 i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~ 443 (543)
++++.. | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 665431 2 12 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC----CcchHHHHHHhhhceEEEEec
Q 009109 444 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG----SYHGKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 444 ~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~v~~~~ 502 (543)
++++++++++|+|+||+++. ..+.+||||.+.||+| +++|.+|+++||+.|+|++..
T Consensus 379 a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 379 AMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999875 3578999999999998 688999999999999998764
No 51
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.7e-76 Score=626.04 Aligned_cols=405 Identities=16% Similarity=0.212 Sum_probs=331.9
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHH
Q 009109 62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 141 (543)
Q Consensus 62 ~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~ 141 (543)
+.++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+|||..+++..|+..+.+.+.
T Consensus 2 ~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~---- 77 (452)
T 3my7_A 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY---- 77 (452)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----
Confidence 5689999999999999999999999999999999999999999999999999999999999997656666655552
Q ss_pred HHhhhcCCCccc-ccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh
Q 009109 142 ELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220 (543)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~ 220 (543)
+++...... ......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 78 ---~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~ 154 (452)
T 3my7_A 78 ---NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVL 154 (452)
T ss_dssp ---HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred ---HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHH
Confidence 122221111 1111223456889999999999999999999999999999999999999999999999999888876
Q ss_pred ----hh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHH
Q 009109 221 ----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293 (543)
Q Consensus 221 ----~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~a 293 (543)
++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+.+ .+++++++||+++|+|||||+||++|||++.|
T Consensus 155 ~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 155 DAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 56 99999999999 778999999996 999999999985 45677889999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCE
Q 009109 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDK 372 (543)
Q Consensus 294 a~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 372 (543)
++.+++++| +|+||.|+++++||||+++||+|+++|+++ +||++++.+.+++.++++++.. +++
T Consensus 231 a~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999 999999999999999999999999999875 4899999999999999986543 445
Q ss_pred EEECcccC----CCCceeeceE-------eeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCC----CCcEEEEe
Q 009109 373 IVYGGQRD----EKQLKIAPTI-------LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP----KPLAAYFF 437 (543)
Q Consensus 373 v~~gg~~~----~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~i~ 437 (543)
+ +||... ..|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 5 476542 3589999997 778999999876 89999999999999999999999974 99999999
Q ss_pred cCCHHHHHH---HHhhccceeEEECCCcccCCCCCCCcccCCC-----------CCCCCcchHHHHHHhhhceEEEEec
Q 009109 438 SDDEQMKKE---FVQNISAGGIVFNDTIVHTTVSSLPFGGVGE-----------SGMGSYHGKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 438 t~d~~~~~~---~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~-----------SG~G~~~g~~~~~~~~~~k~v~~~~ 502 (543)
|+|.+.+++ +++++++|+|+||++.. |||+|. -|+|.++|...-++.+..+.+++++
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~--------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~ 444 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTT--------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKT 444 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC------------------------------------CCCCCGGGGEEEEE
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCC--------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeE
Confidence 999877777 99999999999998754 665553 2778887776555555555554443
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.6e-76 Score=621.46 Aligned_cols=389 Identities=17% Similarity=0.268 Sum_probs=335.5
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc----chhhH-------HHHHHH
Q 009109 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMT 132 (543)
Q Consensus 64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~----~ea~~-------~Ev~~~ 132 (543)
-..+++++++++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+||+. .++.. .|+..+
T Consensus 11 ~~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 11 HHMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 3456899999999999999999999999999999999999999999999999999985 56542 488899
Q ss_pred HHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHH
Q 009109 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212 (543)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~ 212 (543)
++.++++++..+. . ...........+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++
T Consensus 91 ~~~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 91 IKACETVIGLKDP-V-GEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHhcccc-c-CccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 9999888764432 1 11111000012344688999999999999886 478999999999999999999999999999
Q ss_pred HHHHHHHh----hh-cCCCceEeecC-Ch-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109 213 SLLAKLLE----DY-VDNSAVRVVEG-AV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284 (543)
Q Consensus 213 ~~l~~~l~----~a-lP~gvv~vv~g-~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV 284 (543)
.++++++. ++ +|+|+||+|+| +. +.++.|..|+ +|+|+||||+++|+.|++.+ +||+++|||||||+||
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEE
Confidence 99999998 55 89999999998 54 4677777786 99999999999999999887 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 009109 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL 364 (543)
Q Consensus 285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i 364 (543)
++|||++.|++.+++++| .|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred eCCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 999999999999999999 9999 99999999999999999999999999987531
Q ss_pred HhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 009109 365 DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMK 444 (543)
Q Consensus 365 ~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~ 444 (543)
++||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+
T Consensus 298 ---------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 362 (427)
T 1o20_A 298 ---------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNA 362 (427)
T ss_dssp ---------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHH
T ss_pred ---------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHH
Confidence 1233221 12 34 885 345789999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC----CcchHHHHHHhhhceEEEEec
Q 009109 445 KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG----SYHGKFSFDAFSHKKAVLYRS 502 (543)
Q Consensus 445 ~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~v~~~~ 502 (543)
+++++++++|+|+||++.. ..+.+||||.|.||+| +++|.+|+++|++.|+|.+..
T Consensus 363 ~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 363 KKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 9999999999999998765 4678999999999997 467999999999999998764
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.38 E-value=0.12 Score=52.26 Aligned_cols=258 Identities=17% Similarity=0.206 Sum_probs=144.4
Q ss_pred CCCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHhhcCCEE--EEeCCCCChHHH--HHHHHHHhhhcCCCceEee
Q 009109 159 YPSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAV--VLKPSEIAPATS--SLLAKLLEDYVDNSAVRVV 231 (543)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~N---~P~~~~~~~~~~ALaaGN~V--VlKps~~~p~~~--~~l~~~l~~alP~gvv~vv 231 (543)
.|.....++.|+--|++..|.- ||- +.+..++||-.+|+.= +.-|.+...... ...+.++ |+=.+.
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~------Gv~eIy 191 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYIS------GVDRVF 191 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHH------TCCEEE
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhc------CCcEEE
Confidence 3445667899999999999944 664 4455688999999873 333433211111 1112222 333333
Q ss_pred c-CChHHHHHHHh---C--CCCEEEEeCChHHHHHHHHHHhcccCcEEEe-cCCCCcEEE--cCCCCHHHHHHHHHHhhc
Q 009109 232 E-GAVAETSALLE---Q--KWDKILYTGSPRVGRIVMAAAAKHLTPVILE-LGGKSPAVV--DSTINLQVTTRRIIAGKW 302 (543)
Q Consensus 232 ~-g~~~~~~~L~~---~--~v~~v~ftGS~~~g~~i~~~a~~~~~~~~le-lgG~~p~iV--~~daDl~~aa~~iv~~~~ 302 (543)
. |+.....+|.- . +||.|+=.|..-+...=..-.. .|-.. ..|.+=+.| +++||.+..+..++.-+=
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE 267 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE 267 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence 3 45555556652 2 3999998887654322111111 12111 234443333 567999999999887765
Q ss_pred ccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK 382 (543)
Q Consensus 303 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~ 382 (543)
.+. ..+.++|..+ ++|.+++.+++.+....-| ..+...+-+++
T Consensus 268 -Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~l~-------------r~~i~~~sl~~---------------- 310 (423)
T 4gic_A 268 -HDE-----DAQAILISPD--AAHLEAVQASIERLLPGME-------------RAEVIRTSLER---------------- 310 (423)
T ss_dssp -TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGGCT-------------THHHHHHHHHH----------------
T ss_pred -cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhhCc-------------cHHHHHHHHhc----------------
Confidence 222 2235667666 5666666666655431111 11111111210
Q ss_pred CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-ceeEEECCC
Q 009109 383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS-AGGIVFNDT 461 (543)
Q Consensus 383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~-~G~v~iN~~ 461 (543)
+| .++.++|++|+++++|..--- -.-|.++|+. .+..+++ +|.|++..+
T Consensus 311 -----------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG~~ 360 (423)
T 4gic_A 311 -----------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMGRY 360 (423)
T ss_dssp -----------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC--
T ss_pred -----------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecCCC
Confidence 11 244569999999999985322 4677888875 4666665 899999875
Q ss_pred ccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109 462 IVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499 (543)
Q Consensus 462 ~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~ 499 (543)
+.- ..++-+|- +|+.|+.+..+...|...-++.
T Consensus 361 tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 361 TAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp --------------CCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred CchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeEE
Confidence 421 12222333 4667777777888888776654
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.30 E-value=1.1 Score=45.26 Aligned_cols=281 Identities=17% Similarity=0.192 Sum_probs=156.9
Q ss_pred HHHHHHHHHhhhcCCCcccc-cC-cCCCCcceEEeecceEEEEEcCC---chhhhhhhhHHHHHhhcCCEEEEe--CCCC
Q 009109 135 SCKLALKELKYWTKPEKAKT-SL-TTYPSSAEIISEPLGVVLVISTW---NYPFLLSLDPVIGAIAAGNAVVLK--PSEI 207 (543)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~P~GVv~~i~p~---N~P~~~~~~~~~~ALaaGN~VVlK--ps~~ 207 (543)
.|+...++++.+-..+.... .. ...|.....++.|+--|++..|. -|| ++.+..++||-.+|+.=|+- |+.-
T Consensus 87 ai~~A~~nI~~fH~~Q~~~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i 165 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPI 165 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCC
Confidence 34444555555444442221 11 11234455678999999999996 466 45555688999999876544 4322
Q ss_pred ChHHHHHHHHHHhhhcCCCceEeec-CChHHHHHHH---hC--CCCEEEEeCChHHHH--HHHHHHhcccCcEEE-ecCC
Q 009109 208 APATSSLLAKLLEDYVDNSAVRVVE-GAVAETSALL---EQ--KWDKILYTGSPRVGR--IVMAAAAKHLTPVIL-ELGG 278 (543)
Q Consensus 208 ~p~~~~~l~~~l~~alP~gvv~vv~-g~~~~~~~L~---~~--~v~~v~ftGS~~~g~--~i~~~a~~~~~~~~l-elgG 278 (543)
.|.+ ...+.+ .|+=.+.. |+.....+|. .. +||.|+=.|..-+.. ++... ..+ .|-. -..|
T Consensus 166 ~p~i-L~AA~l------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~--~~G-~VgIDm~AG 235 (434)
T 1kae_A 166 ADEI-LYAAQL------CGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ--RLD-GAAIDMPAG 235 (434)
T ss_dssp CHHH-HHHHHH------TTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH--CTT-SCEESCCCC
T ss_pred CHHH-HHHHHH------cCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh--hcC-ccccCCCCC
Confidence 2222 111122 13323332 4555555555 22 399999888764432 22111 111 1211 1244
Q ss_pred CCcEEE--cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHH
Q 009109 279 KSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFH 356 (543)
Q Consensus 279 ~~p~iV--~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~ 356 (543)
.+=+.| +++||.+..+..++.-+= .+. ..+.++|..+ +++.+++.+++++....-| .
T Consensus 236 PSEilViAD~tAnp~~vAaDLLsQAE-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp-------------r 294 (434)
T 1kae_A 236 PSEVLVIADSGATPDFVASDLLSQAE-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAELP-------------R 294 (434)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT-------------T
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHhc-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------h
Confidence 553333 567999999999887765 222 2345666665 5566666666555431111 0
Q ss_pred HHHHHHHHHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEE
Q 009109 357 FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF 436 (543)
Q Consensus 357 ~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i 436 (543)
.+ .+.++. ..- .++.++|++||++++|..--= -.-|
T Consensus 295 ~~----ia~~sl--------------------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel 330 (434)
T 1kae_A 295 AE----TARQAL--------------------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLII 330 (434)
T ss_dssp HH----HHHHHH--------------------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEE
T ss_pred HH----HHHHHH--------------------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhh
Confidence 11 111111 112 356679999999999985333 4678
Q ss_pred ecCCHHHHHHHHhhcc-ceeEEECCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109 437 FSDDEQMKKEFVQNIS-AGGIVFNDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499 (543)
Q Consensus 437 ~t~d~~~~~~~~~~l~-~G~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~ 499 (543)
.++|+. .+..+++ +|.|++..++.- ..++-+|-+ |+.|+.+..+++.|...-++.
T Consensus 331 ~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 331 QTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp ESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred hhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 898874 4556654 799999975421 234445554 456777777788888876654
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=47.44 E-value=21 Score=32.80 Aligned_cols=66 Identities=11% Similarity=0.092 Sum_probs=45.1
Q ss_pred hhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecCChHHHHHHHhCCCCEEEEeCChHH
Q 009109 187 LDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRV 257 (543)
Q Consensus 187 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~ 257 (543)
+..++-.+.+||-||++.+. +.....+..++...||.|++++++.+.+ +.-....+.+.++.+...
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~---Y~~~~~cnilgls~~v~i 86 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQ---YEEAYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESS---CCCTTTCSEEEECTTCCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchh---hcchhheeeecCCCCccc
Confidence 44677788899999999875 4455556777888899999999865322 111123677777665443
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=45.05 E-value=36 Score=29.24 Aligned_cols=114 Identities=14% Similarity=0.122 Sum_probs=72.7
Q ss_pred eEEEEEcCCch-hhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeec-C-ChHHHHHHHhCCCC
Q 009109 171 GVVLVISTWNY-PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE-G-AVAETSALLEQKWD 247 (543)
Q Consensus 171 GVv~~i~p~N~-P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~-g-~~~~~~~L~~~~v~ 247 (543)
|.|+++..-+- +-...+.+-...+.+|-.++-- .-|+..|.+. ..++-..++-++ | ++..++.+.+..||
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa~~L~e~--~Gl~v~~v~k~~eGG~p~I~d~I~~geId 84 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTGNLISRA--TGMNVNAMLSGPMGGDQQVGALISEGKID 84 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHHHHHHHH--HCCCCEEECCGGGTHHHHHHHHHHTTCCC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHHHHHHHH--hCceeEEEEecCCCCCchHHHHHHCCCcc
Confidence 66666655444 4444455556667778887763 3345444331 128766665443 2 34456655555799
Q ss_pred EEEEeCC-------hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCC
Q 009109 248 KILYTGS-------PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNG 307 (543)
Q Consensus 248 ~v~ftGS-------~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~G 307 (543)
+|+||=+ ..-+..|.+.|..+..|+.--+ ..++.++.+.+ ++..
T Consensus 85 lVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~-~~~~ 135 (152)
T 1b93_A 85 VLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPH-FNDA 135 (152)
T ss_dssp EEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGG-GGSC
T ss_pred EEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 9999866 4578889999999989887543 45667777776 5554
No 57
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=43.02 E-value=39 Score=27.81 Aligned_cols=70 Identities=6% Similarity=0.103 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhcCCEEEECcccC--CCCceee-----ceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCC
Q 009109 357 FARLASLLDEDKVSDKIVYGGQRD--EKQLKIA-----PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429 (543)
Q Consensus 357 ~~~~~~~i~~a~~~~~v~~gg~~~--~~g~~~~-----Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 429 (543)
.+...++.++..+.+.++.|+... ..+..++ |+|..+.-.+ ..|..|= +.|+.++|+|||++++.+.+
T Consensus 32 ~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~~~P 106 (124)
T 1s7i_A 32 VDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAAKIP 106 (124)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHHhCC
Confidence 445556666555556666554331 1222222 3444333222 3366654 45778999999999999876
Q ss_pred CC
Q 009109 430 KP 431 (543)
Q Consensus 430 ~g 431 (543)
+.
T Consensus 107 ~~ 108 (124)
T 1s7i_A 107 PG 108 (124)
T ss_dssp GG
T ss_pred cc
Confidence 53
No 58
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=37.74 E-value=53 Score=25.74 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=18.7
Q ss_pred eeeeeccCCHHHHHHHHHcCCC
Q 009109 409 LLPIVTVEKIEDSFDVIKSKPK 430 (543)
Q Consensus 409 vl~v~~~~~~~eai~~~n~~~~ 430 (543)
-+.|+.|+|.+.|.++.|+-+|
T Consensus 55 ~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHHH
T ss_pred eEEEEECCCHHHHHHHHcCHHH
Confidence 6789999999999999986543
No 59
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=37.62 E-value=17 Score=30.63 Aligned_cols=79 Identities=9% Similarity=0.036 Sum_probs=49.3
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeec-C-ChHHHHHHHhCCCCEEEEeCC-------hHHHHH
Q 009109 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE-G-AVAETSALLEQKWDKILYTGS-------PRVGRI 260 (543)
Q Consensus 190 ~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~-g-~~~~~~~L~~~~v~~v~ftGS-------~~~g~~ 260 (543)
-...+..|-.++- |.-|+..|.+. ..++-..++-++ + ++..++.+.+..||+|+||=+ ..-+..
T Consensus 24 ~~~~ll~Gf~l~A-----T~gTa~~L~e~--~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~ 96 (134)
T 2xw6_A 24 RHREVLARFPLVA-----TGTTGRRIEEA--TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQA 96 (134)
T ss_dssp HTHHHHTTSCEEE-----CHHHHHHHHHH--HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHH
T ss_pred HHHHHhCCCEEEE-----ccHHHHHHHHh--hCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccchHHH
Confidence 3334445665554 33444444331 127776666565 5 455666666567999999876 335678
Q ss_pred HHHHHhcccCcEEEe
Q 009109 261 VMAAAAKHLTPVILE 275 (543)
Q Consensus 261 i~~~a~~~~~~~~le 275 (543)
|.+.|..+..|+.--
T Consensus 97 IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 97 LLRVCDVHGVPLATN 111 (134)
T ss_dssp HHHHHHHHTCCEECS
T ss_pred HHHHHHHcCCCeEcC
Confidence 889888888887753
No 60
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=34.30 E-value=88 Score=22.12 Aligned_cols=36 Identities=17% Similarity=0.022 Sum_probs=27.5
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009109 75 ELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII 110 (543)
Q Consensus 75 aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela 110 (543)
.++.....|..+|..+|..+.......-++...++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667789999999999998877776666665554
No 61
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=33.20 E-value=53 Score=27.66 Aligned_cols=60 Identities=10% Similarity=0.102 Sum_probs=42.1
Q ss_pred HHHhhh-cCCCceEeecC--C----hHHHHHHHhCCCCEEEEeCCh-----HHHHHHHHHHhcccCcEEEec
Q 009109 217 KLLEDY-VDNSAVRVVEG--A----VAETSALLEQKWDKILYTGSP-----RVGRIVMAAAAKHLTPVILEL 276 (543)
Q Consensus 217 ~~l~~a-lP~gvv~vv~g--~----~~~~~~L~~~~v~~v~ftGS~-----~~g~~i~~~a~~~~~~~~lel 276 (543)
+.|++. +|-..|+-++. + +...+.+.+..||+|++|=+. .-+..|.+.|..+..|++..+
T Consensus 61 ~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 61 DWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 344555 88777766653 2 445666655679999998654 368889999999999987654
No 62
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.27 E-value=1.7e+02 Score=22.80 Aligned_cols=44 Identities=9% Similarity=-0.113 Sum_probs=32.1
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 009109 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSK 119 (543)
Q Consensus 76 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk 119 (543)
++.....|+.++.++|..+.......-+++..++........-+
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~~ 92 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSK 92 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34455679999999999998888877777777776655444433
No 63
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=28.71 E-value=44 Score=29.42 Aligned_cols=121 Identities=14% Similarity=0.025 Sum_probs=76.5
Q ss_pred eEEeecc-eEEEEEcCCch-hhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeec-C-ChHHHH
Q 009109 164 EIISEPL-GVVLVISTWNY-PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE-G-AVAETS 239 (543)
Q Consensus 164 ~~~~~P~-GVv~~i~p~N~-P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~-g-~~~~~~ 239 (543)
.+..-|. |.|+++..-+- +-...+.+-...+.+|-.++- |.-|+..|.+. ..+|-..++-++ | ++..++
T Consensus 20 ~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e~--~Gl~v~~v~k~~eGG~pqI~d 92 (178)
T 1vmd_A 20 YKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQEK--LGLKVHRLKSGPLGGDQQIGA 92 (178)
T ss_dssp EEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHHH--HCCCCEECSCGGGTHHHHHHH
T ss_pred eeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHHH--hCceeEEEeecCCCCCchHHH
Confidence 3344454 76776665554 444555566667778888775 44555444431 127766555443 2 344556
Q ss_pred HHHhCCCCEEEEeCC-------hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCC
Q 009109 240 ALLEQKWDKILYTGS-------PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNG 307 (543)
Q Consensus 240 ~L~~~~v~~v~ftGS-------~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~G 307 (543)
.+.+..||+|+||=+ ..-+..|.+.|.....|+..-+ ..++.++.+.+ ++..
T Consensus 93 ~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail-~~~~ 151 (178)
T 1vmd_A 93 MIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPL-MNDV 151 (178)
T ss_dssp HHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGG-GGSC
T ss_pred HHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 555557999999866 3457889999999989887533 45677778877 5553
No 64
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=28.40 E-value=2.8e+02 Score=24.30 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=30.1
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCC
Q 009109 195 AAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA 234 (543)
Q Consensus 195 aaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~ 234 (543)
.+||-+|+|-.|-+ +..++.++... +|++++-.|.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 47999999976554 77788888887 888899888774
No 65
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.17 E-value=1.3e+02 Score=22.56 Aligned_cols=36 Identities=11% Similarity=-0.140 Sum_probs=27.5
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009109 75 ELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII 110 (543)
Q Consensus 75 aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela 110 (543)
.++.....|+.++.+++..+.......-++...++.
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 48 FSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566789999999999988887776666666554
No 66
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=24.23 E-value=2.3e+02 Score=21.65 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=19.4
Q ss_pred ceeeeeccCCHHHHHHHHHcCCC
Q 009109 408 PLLPIVTVEKIEDSFDVIKSKPK 430 (543)
Q Consensus 408 Pvl~v~~~~~~~eai~~~n~~~~ 430 (543)
..+.|+.|+|.+.|.++.|+-.|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 46789999999999999987543
No 67
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=23.72 E-value=1.5e+02 Score=23.05 Aligned_cols=39 Identities=3% Similarity=-0.164 Sum_probs=31.6
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 009109 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIH 114 (543)
Q Consensus 76 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~ 114 (543)
++.....|+.++..++..+..+....-+.+..++.....
T Consensus 38 sK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 38 MVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566678899999999999998888877777777776544
No 68
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=23.36 E-value=87 Score=20.68 Aligned_cols=27 Identities=26% Similarity=0.460 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 009109 92 MSQIQSIANMIEEKEEEIIEAIHKDLS 118 (543)
Q Consensus 92 ~~iL~~~a~~l~~~~~ela~~~~~etG 118 (543)
.++|..+...|.+-+++|++++..|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999998887754
No 69
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=23.17 E-value=49 Score=27.54 Aligned_cols=47 Identities=23% Similarity=0.250 Sum_probs=32.2
Q ss_pred CceEeecCChH-HHHHHHh-CCCCEEEEeCChHHHHHHHHHHhcccCcE
Q 009109 226 SAVRVVEGAVA-ETSALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTPV 272 (543)
Q Consensus 226 gvv~vv~g~~~-~~~~L~~-~~v~~v~ftGS~~~g~~i~~~a~~~~~~~ 272 (543)
|.+++++|+.+ .-...++ .++..|++||+......+.+.|.+...|+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ipv 101 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVPV 101 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCCE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCeE
Confidence 56888878544 3334444 45889999998887777877776655554
No 70
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.68 E-value=43 Score=29.49 Aligned_cols=48 Identities=21% Similarity=0.416 Sum_probs=36.5
Q ss_pred cccccceeeeeccCCHHHHHHHH----HcCCCCcEEEEecCCHHHHHHHHhh
Q 009109 403 EEIFGPLLPIVTVEKIEDSFDVI----KSKPKPLAAYFFSDDEQMKKEFVQN 450 (543)
Q Consensus 403 ~E~fgPvl~v~~~~~~~eai~~~----n~~~~gl~a~i~t~d~~~~~~~~~~ 450 (543)
||-||+..+..--.++++|++.+ .+...-|-.++++.+......|.+.
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~ 76 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQ 76 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHH
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHH
Confidence 35567766666668899999999 7778889999999875555555544
No 71
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=20.42 E-value=1.7e+02 Score=21.08 Aligned_cols=32 Identities=9% Similarity=-0.068 Sum_probs=22.5
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q 009109 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEE 107 (543)
Q Consensus 76 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 107 (543)
++.....|+.++.++|..+..+....-+.+..
T Consensus 36 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~ 67 (76)
T 1hry_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHRE 67 (76)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34455679999999998887766665544433
Done!