BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009110
(543 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7W1|MSL3_ARATH Mechanosensitive ion channel protein 3, chloroplastic
OS=Arabidopsis thaliana GN=MSL3 PE=2 SV=1
Length = 678
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/501 (65%), Positives = 403/501 (80%), Gaps = 11/501 (2%)
Query: 7 MQLSQELNIYNKFGCSNLYTTGKGR----LVHINLSSLAMRRDAWGLNLLSHLCGPLNPI 62
+ LS +LN++ S + + G+ L LSS A R+D W L LL L G + P+
Sbjct: 8 LPLSHDLNVHKIHEASGFHNSAAGKNRVYLTRTGLSSCATRQDVWSLQLLESLSGSIVPV 67
Query: 63 STKCNVFICRSVLAPG-GIDIPVLKSAAAAVLTRSYDTLRGNPVILRLIPAAALVAFAAW 121
S++CN F+CRS L+PG G + P+LKS A + TR YD L GNP +++LIPA ++AFA W
Sbjct: 68 SSRCNAFVCRSALSPGNGNEGPILKSTAV-IFTRVYDALGGNPHLVKLIPAVGILAFATW 126
Query: 122 GLVPLVRLGRT-IFLNRTDGSWKRSRTHYILTSYLQPLLLWTGVTLICRELDPLVLPSET 180
GL PL+RL RT +F D + ++S T YI+ SYLQPLLLW+G L+CR LDP+VLPS
Sbjct: 127 GLRPLLRLARTTLFEKGNDANSQKSSTQYIVVSYLQPLLLWSGAILLCRTLDPIVLPSSA 186
Query: 181 SQGVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFAGKAVY 240
Q +KQR+L F RS+STVLAF+ CLSSL+QQ+QKF E N+ D RNMGF+FAGKAVY
Sbjct: 187 GQAIKQRLLIFARSISTVLAFSCCLSSLLQQVQKFFMETNNP--ADTRNMGFSFAGKAVY 244
Query: 241 TAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPFVINE 300
TA WVAA SLFMELLGFSTQ+WLTAGGLGTVLLTLAGREI TNFLSS+MIHAT+PFV+NE
Sbjct: 245 TAAWVAAASLFMELLGFSTQKWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPFVLNE 304
Query: 301 WIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTY 360
WIQTKI GYEVSGTVE VGWWSPTIIRGDDREAVHIPNH+F+VN+VRNL+QKTHWRIKT+
Sbjct: 305 WIQTKIGGYEVSGTVEQVGWWSPTIIRGDDREAVHIPNHQFSVNIVRNLTQKTHWRIKTH 364
Query: 361 LAISHLDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLNILVSCFVKTS 420
LAISHLDV K+N+IVADMRKVL+KNPQ+EQQ++HRRVFLE+I+PE+Q+L IL+SCFVKTS
Sbjct: 365 LAISHLDVSKINNIVADMRKVLSKNPQIEQQKIHRRVFLEDIDPENQALRILISCFVKTS 424
Query: 421 RFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSEPDLENIPFADTIFTHSRAAA 480
RFEEYLCVKEA+LLDLL VI HH AR+ATPIRTVQ++ +E +++ F+D +F ++AA
Sbjct: 425 RFEEYLCVKEAVLLDLLTVIRHHGARLATPIRTVQRMRNEAEVDTAGFSDIVF--NQAAM 482
Query: 481 NRPFLLIEPSYKISSDDKIKA 501
NR ++LIEPSYKI+SDD K+
Sbjct: 483 NRRYMLIEPSYKINSDDNSKS 503
>sp|Q56X46|MSL2_ARATH Mechanosensitive ion channel protein 2, chloroplastic
OS=Arabidopsis thaliana GN=MSL2 PE=2 SV=1
Length = 673
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/512 (62%), Positives = 396/512 (77%), Gaps = 10/512 (1%)
Query: 1 MTCSSTMQLSQELNIYNKFGCSNLYTTGKGRLVHINLSSLAM-----RRDAWGLNLLSHL 55
M T+QLS L + N + R +HI+ L++ + + L ++L
Sbjct: 1 MALYGTLQLSHSLGLCRNQRFCNPENSAMRRRLHISNGPLSLGVPLGQHGFSNILLSNYL 60
Query: 56 CGPLNPISTKCNVFICRSVLAPGGIDIPVLKSAAAAVLTRSYDTLRGNPVILRLIPAAAL 115
P+ + + F C S A G P +K A VLT+S+ ++ P + +L+PA AL
Sbjct: 61 RRPICSVPCRTTAFRCHSFSASGKAIEPAVK-AVTVVLTKSHGLMQQFPFVYKLVPAVAL 119
Query: 116 VAFAAWGLVPLVRLGRTIFLNRTDGSWKRSRTHYILTSYLQPLLLWTGVTLICRELDPLV 175
+ F+ WGLVP R GR I LN+ D WK+S T++++TSY+QPLLLW G ICR LDP+V
Sbjct: 120 LVFSLWGLVPFARQGRNILLNKNDNGWKKSGTYHVMTSYVQPLLLWLGALFICRALDPVV 179
Query: 176 LPSETSQGVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFA 235
LP+E S+ VK R+LNFVRSLSTVLAFAYCLSSLIQQ QK +E ++ +D RNMGF FA
Sbjct: 180 LPTEASKIVKDRLLNFVRSLSTVLAFAYCLSSLIQQTQKLFSET--SNPSDTRNMGFQFA 237
Query: 236 GKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQP 295
GKA+Y+AVWVAAVSLFMELLGFSTQ+WLTAGGLGTVL+TLAGREI TNFLSSVMIHAT+P
Sbjct: 238 GKALYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLITLAGREILTNFLSSVMIHATRP 297
Query: 296 FVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHW 355
FV+NEWIQTKI+GYEVSGTVEHVGWWSPTIIRG+DREA+HIPNHKFTVNVVRNL+QKTHW
Sbjct: 298 FVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAIHIPNHKFTVNVVRNLTQKTHW 357
Query: 356 RIKTYLAISHLDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLNILVSC 415
RIKT+LAISHLDV+K+N+IVADMRKVLAKNP VEQQRLHRRVFLEN+ PE+Q+L+IL+SC
Sbjct: 358 RIKTHLAISHLDVNKINNIVADMRKVLAKNPMVEQQRLHRRVFLENVIPENQALSILISC 417
Query: 416 FVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSEPDLENIPFADTIFTH 475
FVKTS EEYL VKEAILLDLL VISHHRAR+ATPIRT++K+Y+E D+EN PF ++++
Sbjct: 418 FVKTSHHEEYLGVKEAILLDLLRVISHHRARLATPIRTIRKMYTETDVENTPFGESMY-- 475
Query: 476 SRAAANRPFLLIEPSYKISSDDKIKASTRAAR 507
+ RP +LIEP+YKI+ +DK K+ RAA+
Sbjct: 476 GGVTSRRPLMLIEPAYKINGEDKSKSQNRAAK 507
>sp|P0AEB5|YNAI_ECOLI MscS family inner membrane protein YnaI OS=Escherichia coli (strain
K12) GN=ynaI PE=1 SV=1
Length = 343
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 19/246 (7%)
Query: 210 QQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLG 269
QQI+K D T AR M + + + V V L+ E G S LT GG+G
Sbjct: 104 QQIKK------GRDITSARIMS-----RIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIG 152
Query: 270 TVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGD 329
+ + +AG++I +NF S +M++ +PF I +WI++ + E GTV +GW I D
Sbjct: 153 GLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIE--GTVAEIGWRITKITTFD 210
Query: 330 DREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKNPQVE 389
+R +++PN F+ V N + T+ RI T + + + D KV IV +R++L +P ++
Sbjct: 211 NR-PLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAID 269
Query: 390 QQRLHRRVFLENINP-ESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMA 448
Q R+ L N SLNI+V CF KT+ + E+L ++ + L ++ ++ H A A
Sbjct: 270 Q----RQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFA 325
Query: 449 TPIRTV 454
P +T+
Sbjct: 326 FPSQTL 331
>sp|P0AEB6|YNAI_ECO57 MscS family inner membrane protein YnaI OS=Escherichia coli O157:H7
GN=ynaI PE=3 SV=1
Length = 343
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 19/246 (7%)
Query: 210 QQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLG 269
QQI+K D T AR M + + + V V L+ E G S LT GG+G
Sbjct: 104 QQIKK------GRDITSARIMS-----RIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIG 152
Query: 270 TVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGD 329
+ + +AG++I +NF S +M++ +PF I +WI++ + E GTV +GW I D
Sbjct: 153 GLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIE--GTVAEIGWRITKITTFD 210
Query: 330 DREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKNPQVE 389
+R +++PN F+ V N + T+ RI T + + + D KV IV +R++L +P ++
Sbjct: 211 NR-PLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAID 269
Query: 390 QQRLHRRVFLENINP-ESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMA 448
Q R+ L N SLNI+V CF KT+ + E+L ++ + L ++ ++ H A A
Sbjct: 270 Q----RQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFA 325
Query: 449 TPIRTV 454
P +T+
Sbjct: 326 FPSQTL 331
>sp|O66994|Y812_AQUAE Uncharacterized MscS family protein aq_812 OS=Aquifex aeolicus
(strain VF5) GN=aq_812 PE=3 SV=1
Length = 368
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 210 QQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLG 269
+I +F + D A +G +F K + V V + ++ G + L + GL
Sbjct: 126 NKIVEFFVKVGGKDF--AEEVG-DFILKILKAFVVVIVGASLLQEWGVNIGAILASVGLL 182
Query: 270 TVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGD 329
+ ++LA ++ F N LS ++I +P + E ++ K + G+VE +G S T IR
Sbjct: 183 GLAVSLAAKDTFENILSGLIILLDKPVKVGETVKVK----DFMGSVEDIGLRS-TKIRTF 237
Query: 330 DREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISH-LDVHKVNSIVADMRKVLAKNPQV 388
D+ V IPN N V N +++ R++ Y+ + + ++ +I+ ++R++L ++P V
Sbjct: 238 DKSLVTIPNRDIVNNHVENFTRRNKRRVRFYIGVVYSTKREQLENILKEIRELLKEHPGV 297
Query: 389 EQQRLHRRVFLENINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMA 448
+ V+ EN SLNIL+ + T+ +EEYL + E I L ++ ++ + + A
Sbjct: 298 AKDE-KFYVYFENYG--DSSLNILIQYYANTNDYEEYLKIIEDINLKIMEIVEKNGSSFA 354
Query: 449 TPIRTV 454
P R+V
Sbjct: 355 FPSRSV 360
>sp|Q9ZKG7|Y415_HELPJ Uncharacterized MscS family protein jhp_0969 OS=Helicobacter pylori
(strain J99) GN=jhp_0969 PE=3 SV=1
Length = 623
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 233 NFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHA 292
N K VY +++ A+ ++ LGF+ + + G+G + + LA +++ NF +SV++
Sbjct: 363 NLILKVVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLL 422
Query: 293 TQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLS-Q 351
F +WI + G EV GTV +G T IR D + +PN + +RN S +
Sbjct: 423 DNSFSQGDWI---VCG-EVEGTVVEMG-LRRTTIRAFDNALLSVPNSELAGKPIRNWSRR 477
Query: 352 KTHWRIKTYLAISHLDVHKVNSI-VADMRKVLAKNPQV--------EQQRLHRRVFLENI 402
K RIK + +++ + V D++++L +P++ + +R +F ++I
Sbjct: 478 KVGRRIKMEIGLTYSSSQSALQLCVKDIKEMLENHPKIANGADSALQNASDYRYMFKKDI 537
Query: 403 ------------------NPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHR 444
S+NILV CF KT +EE+L VKE ++L ++ ++ H
Sbjct: 538 VSIDDFLGYKNNLFVFLDQFADSSINILVYCFSKTVVWEEWLEVKEDVMLKIMGIVEKHH 597
Query: 445 ARMATPIRTVQKIYSE 460
A P Q +Y E
Sbjct: 598 LSFAFP---SQSLYVE 610
>sp|O25170|Y415_HELPY Uncharacterized MscS family protein HP_0415 OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=HP_0415 PE=3 SV=1
Length = 623
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 233 NFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHA 292
N K VY +++ A+ ++ LGF+ + + G+G + + LA +++ NF +SV++
Sbjct: 363 NLILKVVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLL 422
Query: 293 TQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLS-Q 351
F +WI + G EV GTV +G T IR D + +PN + +RN S +
Sbjct: 423 DNSFSQGDWI---VCG-EVEGTVVEMG-LRRTTIRAFDNALLSVPNSELAGKPIRNWSRR 477
Query: 352 KTHWRIKTYLAISHLDVHKVNSI-VADMRKVLAKNPQV--------EQQRLHRRVFLENI 402
K RIK + +++ + V D++++L +P++ + +R +F ++I
Sbjct: 478 KVGRRIKMEIGLTYSSSQSALQLCVKDIKEMLENHPKIANGADSALQNVSDYRYMFKKDI 537
Query: 403 ------------------NPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHR 444
S+NILV CF KT +EE+L VKE ++L ++ ++ H
Sbjct: 538 VSIDDFLGYKNNLFVFLDQFADSSINILVYCFSKTVVWEEWLEVKEDVMLKIMGIVEKHH 597
Query: 445 ARMATPIRTVQKIYSE 460
A P Q +Y E
Sbjct: 598 LSFAFP---SQSLYVE 610
>sp|Q58543|MSMJL_METJA Large-conductance mechanosensitive channel MscMJLR
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1143
PE=1 SV=1
Length = 361
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 255 LGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGT 314
LG+ + L G+G + + LA + + +N ++ ++I +PF I WI T G SG
Sbjct: 161 LGYDIKTLLAGLGIGGLAVALASQNLVSNLIAGLIILTDKPFKIGNWI-TFSGG---SGI 216
Query: 315 VEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISH-LDVHKVNS 373
VE +G S T IR D + +PN K +++N+ K W++ T + +++ V K+
Sbjct: 217 VEDIGIRS-TKIRATDNSIIVVPNSKLIDEIIQNVPSKNKWKVSTTIGVTYNTPVEKIRK 275
Query: 374 IVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLNILVSCFVKTSRFEEY 425
++ +L ++P VE + + V+ + SLNI V ++K SR+ Y
Sbjct: 276 AEEIIKNILLEHPNVEDEPI--TVYFKEFG--DWSLNIQVVYYIKNSRYNGY 323
>sp|Q8VZL4|MSL1_ARATH Mechanosensitive ion channel protein 1, mitochondrial
OS=Arabidopsis thaliana GN=MSL1 PE=2 SV=1
Length = 497
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 233 NFAG---KAVYTAVWVAAVSLFM-------ELLGFSTQRWLTAGGLGTVLLTLAGREIFT 282
+F G + V T V++V LF E G + Q LT GG+G V A R+I
Sbjct: 271 SFGGLDREKVLTLDKVSSVGLFAIGLMASAEACGVAVQSILTVGGVGGVATAFAARDILG 330
Query: 283 NFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFT 342
N LS + + ++PF + + I+ V G V +G + +++ ++ V +PN F+
Sbjct: 331 NVLSGLSMQFSRPFSMGD----TIKAGSVEGQVIEMGLTTTSLLNA-EKFPVLVPNSLFS 385
Query: 343 VNVVRNLSQKTHWR-IKTYLAISHLDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLEN 401
V+ N S + WR I + + + D+ + I +++++L N +V + +L
Sbjct: 386 SQVIVNKS-RAQWRAIASKIPLQIDDLDMIPQISNEIKEMLRSNTKVFLGKEAPHCYLSR 444
Query: 402 INPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMAT 449
+ E + + C + EE ++ +LL+ + +I H + T
Sbjct: 445 V--EKSFAELTIGCNLIRMGKEELYNTQQEVLLEAVKIIKKHGVSLGT 490
>sp|O07594|YHDY_BACSU Uncharacterized MscS family protein YhdY OS=Bacillus subtilis
(strain 168) GN=yhdY PE=3 SV=1
Length = 371
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 234 FAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHAT 293
F K + + +VS+ + + ++ GLG + LA ++ +NF ++I
Sbjct: 136 FLSKLLRFVIIALSVSVIAQEFNYDVNGFVAGLGLGGLAFALAAKDTISNFFGGIIIITE 195
Query: 294 QPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKT 353
+PF I +W++T V+G+VE + + S T R V +PN ++ + N ++ T
Sbjct: 196 KPFTIGDWVETS----TVTGSVEDITFRS-TRFRTAQGALVTVPNSTLSMEAITNWTRMT 250
Query: 354 HWRIKTYLAISHLD-VHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQS-LNI 411
+I + +S+ + + + +R +L +E + + + + N + + S N+
Sbjct: 251 KRQITFSIHVSYATPIENLERSIHSLRTML-----LEHEGVDNEIIMVNFDTFADSYYNL 305
Query: 412 LVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTV 454
+ + KT+ + E L ++E I ++ ++ + A P + V
Sbjct: 306 FFNFYTKTTVWAENLNIREDINYKIIEILGAEGVQFAYPGQMV 348
>sp|Q57634|MSMJS_METJA Small-conductance mechanosensitive channel MscMJ
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0170
PE=1 SV=1
Length = 350
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 283 NFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFT 342
NF++ ++I +PF + W+ K++G E G VE +G S T IR D + IPN +
Sbjct: 182 NFIAGILILIDKPFSLGHWV--KVKGAE--GIVEEIGIRS-TRIRTFDYTLITIPNSELL 236
Query: 343 VNVVRNLSQKTHWRIKTYLAISH-LDVHKVNSIVADMRKVLAKNP-QVEQQRLHRRVFLE 400
+ + NL+ + R+ + +++ V K+ +++++ +P + R+H R +
Sbjct: 237 DSAIENLTVRDRRRVLMTIGLTYNTPVEKIKRAKEIIKEIVENHPATLPPYRVHFREY-- 294
Query: 401 NINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSE 460
SLN+ V FV+ F+ YL + I L + MA P TV Y E
Sbjct: 295 ----GDWSLNLRVEYFVRNMGFDYYLNAVDEINLKIKEEFEKEGIEMAFPTYTV---YLE 347
Query: 461 PD 462
D
Sbjct: 348 KD 349
>sp|O28726|Y1546_ARCFU Uncharacterized MscS family protein AF_1546 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1546 PE=3 SV=1
Length = 283
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 237 KAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPF 296
K +Y + + A + LG L AGG+ ++L A + + N +S + + + +P
Sbjct: 60 KVIYFGIIIVAFIAVLPALGLDLSGLLVAGGITGIVLGFASQSVVANLVSGIFLISEKPI 119
Query: 297 VINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHK-FTVNV 345
I + Q I G V+G VE V S TIIR D V IPN K FT N+
Sbjct: 120 KIGD--QVNIDG--VAGFVEDVNILS-TIIRTYDGLYVRIPNEKVFTSNI 164
>sp|P42531|Y1270_CORGL Uncharacterized protein Cgl1270/cg1434 OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=Cgl1270 PE=4 SV=2
Length = 491
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 212 IQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVA----AVSLFMELLGFSTQRWLTAGG 267
I++ + A DAD+T + FAG VY A VA AVS M+ GFS
Sbjct: 4 IKRRVESAADADTTKNQ---LAFAGVGVYIAQIVAFFMLAVSA-MQAFGFSLAGAAIPAT 59
Query: 268 LGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIR 327
+ + + L + I +FL+ I + F + +W++ + G V GTV + + T IR
Sbjct: 60 IASAAIGLGAQSIVADFLAGFFILTEKQFGVGDWVRFEGNGIVVEGTVIEITMRA-TKIR 118
Query: 328 GDDREAVHIPNH--KFTVNVVRNLSQKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKN 385
+E V IPN K +N N S R + I L + ++A R A
Sbjct: 119 TIAQETVIIPNSTAKVCINNSNNWS-----RAVVVIPIPMLGSENITDVIA--RSEAATR 171
Query: 386 PQVEQQRLHRRVFLE-NINPESQ 407
+ Q+++ + E +++P ++
Sbjct: 172 RALGQEKIAPEILGELDVHPATE 194
>sp|O52401|MSCS_EDWI9 Small-conductance mechanosensitive channel OS=Edwardsiella ictaluri
(strain 93-146) GN=mscS PE=3 SV=1
Length = 286
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 255 LGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGT 314
LG T + G + + LA + +NF + V++ +PF E + V+GT
Sbjct: 89 LGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGVLLVLFRPFRAGEVVDLG----GVTGT 144
Query: 315 VEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISH-LDVHKVNS 373
V V +S T+ D++ V +PN K + N S++ RI + +++ D+ V
Sbjct: 145 VREVQIFSTTLATADNKVIV-VPNGKIIAGNIINFSREPKRRIDIIVGVAYDADIDVVKR 203
Query: 374 IVADM 378
++ D+
Sbjct: 204 VLGDV 208
>sp|Q89AB5|Y402_BUCBP Uncharacterized MscS family protein bbp_402 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_402 PE=3
SV=1
Length = 281
Score = 39.3 bits (90), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 233 NFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHA 292
NF V + A+ + +G T + G + + LA + +NF + V++
Sbjct: 67 NFLAALVRYIIITFALIASLGCIGVQTTSVIAILGAAGMAIGLALQGSLSNFAAGVLLVI 126
Query: 293 TQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQK 352
+PF E++ + ++SGTV ++ + T R D + V IPN K + N S++
Sbjct: 127 LRPFRTGEYVNLE----KISGTVLNIHVFYTT-FRTLDGKIVVIPNGKIISGNIINYSRE 181
Query: 353 THWRIKTYLAISH-LDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLNI 411
R + + +S+ D+ KV I ++ V+ +V + R V L + P SLN
Sbjct: 182 KARRNEFIIGVSYDSDIDKVIKI---LKNVVKNEKRVLKDR-DIIVGLSELAPS--SLNF 235
Query: 412 LVSCFVKTS 420
+V C+ T
Sbjct: 236 IVRCWSHTD 244
>sp|Q57362|Y195A_HAEIN Uncharacterized MscS family protein HI_0195.1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_0195.1 PE=1 SV=1
Length = 1111
Score = 39.3 bits (90), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 255 LGFSTQRWLTAG---GLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEV 311
+ +S +WL A GLG +EIF NF+S +++ +P + + + EV
Sbjct: 907 MSWSKLQWLFAALSVGLG-----FGMQEIFANFVSGIILLFERPIRVGDVVTIN----EV 957
Query: 312 SGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRN 348
SGTV + + T+I D +E + +PN F V N
Sbjct: 958 SGTVAKIRIRAITLIDFDRKEVI-VPNKSFVTGQVTN 993
>sp|P77338|KEFA_ECOLI Potassium efflux system KefA OS=Escherichia coli (strain K12) GN=kefA
PE=1 SV=1
Length = 1120
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 240 YTAVWVAAVSLFMEL-LGFSTQRWLTAG---GLGTVLLTLAGREIFTNFLSSVMIHATQP 295
Y + V A+++F L + + +WL A GLG L +EIF NF+S ++I +P
Sbjct: 891 YIIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGL-----QEIFGNFVSGLIILFERP 945
Query: 296 FVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLS-QKTH 354
I + + SGTV + + TI D +E + IPN F + N S T
Sbjct: 946 VRIGDTVTIG----SFSGTVSKIRIRATTITDFDRKEVI-IPNKAFVTERLINWSLTDTT 1000
Query: 355 WRIKTYLAISH-LDVHKVNSIVADMRKVLAK 384
R+ L +++ D+ KV RKVL K
Sbjct: 1001 TRLVIRLGVAYGSDLEKV-------RKVLLK 1024
>sp|P79081|ATS1_SCHPO N-acetyltransferase ats1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ats1 PE=2 SV=1
Length = 168
Score = 36.2 bits (82), Expect = 0.73, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 235 AGKAVYT---AVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIH 291
AG A+Y + W + V +++E L Q G G+ LL+ RE S+ I
Sbjct: 67 AGMAIYFLNFSTWTSRVGIYLEDLYVRPQ--FRGKGYGSYLLSYLARE-------SLRIG 117
Query: 292 ATQ-PFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAV 334
+ +V+ +W Q I+ YE +G + VG WS + G++ +A+
Sbjct: 118 GRRLDWVVLDWNQRAIEVYEKAGA-QKVGGWSMMRVTGENLKAL 160
>sp|Q98LB1|SYV_RHILO Valine--tRNA ligase OS=Rhizobium loti (strain MAFF303099) GN=valS
PE=3 SV=1
Length = 927
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 41/109 (37%), Gaps = 14/109 (12%)
Query: 232 FNFAGKAVYTAVWVAAVSLFMELLG---FSTQRWLTAGGLGTVLLTLAGREIFTNFLSSV 288
FN A A Y VW ++ELL T A V L EI+
Sbjct: 676 FNEAAGAAYRFVWNLFCDWYLELLKPVFMGTDEAAKAESRACVAFVL--DEIYK------ 727
Query: 289 MIHATQPFVINE-WIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHI 336
++H PF+ E W QT +G E + H W SP DD A I
Sbjct: 728 LLHPMMPFMTEELWAQTAGEGKERESLLCHAAWPSPDF--EDDEAAADI 774
>sp|Q20EZ8|FTSHL_OLTVI ATP-dependent zinc metalloprotease FtsH homolog OS=Oltmannsiellopsis
viridis GN=ftsH PE=3 SV=1
Length = 2292
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 183 GVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFAGKAVYTA 242
GV QR NF SL + Y LS L+Q K LT + T N + +++
Sbjct: 1776 GVSQREGNFTESLFSE-KVTYTLSQLVQTWPKVLTSSKLKQKTPQYNEVL--SSESLNKK 1832
Query: 243 VWVAAVSLFMELLGFSTQR-WLT----AGGLGTVL-LTLAGREI-FTNFLSSVMIHATQP 295
+WV++ + +S Q+ +LT G G+ L ++++ E+ +LSS +AT P
Sbjct: 1833 IWVSSDTTHP----YSVQKQFLTYVSVKKGFGSTLDVSMSLPELTVEKWLSSDSTYATDP 1888
Query: 296 FVINEWIQTKIQGYEVSGTV 315
F +N + GY SG V
Sbjct: 1889 FTLNRF------GYYQSGKV 1902
>sp|P39285|YJEP_ECOLI Uncharacterized MscS family protein YjeP OS=Escherichia coli
(strain K12) GN=yjeP PE=3 SV=3
Length = 1107
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 257 FSTQRWLTAG-GLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTV 315
+S +WL A G+G L +EIF NF+S ++I +P I + + + +++G+V
Sbjct: 897 WSKLQWLVAALGVG---LGFGLQEIFANFISGLIILFEKPIRIGDTVTIR----DLTGSV 949
Query: 316 EHVGWWSPTIIRGDDREAVHIPNHKF 341
+ + TI D +E + +PN F
Sbjct: 950 TKINTRATTISDWDRKEII-VPNKAF 974
>sp|Q5NXL5|SYV_AROAE Valine--tRNA ligase OS=Aromatoleum aromaticum (strain EbN1) GN=valS
PE=3 SV=1
Length = 948
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 15/155 (9%)
Query: 199 LAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFS 258
L F++ ++ ++Q+ TEA A R+ F+ KAVY VW ++EL
Sbjct: 670 LDFSFADRWIVSKLQR--TEAEVAQHF--RDYRFDLVSKAVYEFVWDEYCDWYVELAKVQ 725
Query: 259 TQRWLTAGGLGTVLLTLAGREIFTNFLSSV--MIHATQPFVINEWIQT--KIQGYEVSGT 314
Q GT A R L +V + H PF+ E QT + G + + +
Sbjct: 726 IQS-------GTEAQQRATRRTLLRVLETVLRLAHPLIPFITEELWQTVAPLAGRKDTDS 778
Query: 315 VEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNL 349
+ + + R D+ I K V RNL
Sbjct: 779 IMLARYPEADLSRLDEASEAKIAELKAIVGTCRNL 813
>sp|Q2VZV0|IF2_MAGSA Translation initiation factor IF-2 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=infB PE=3 SV=1
Length = 872
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 24/175 (13%)
Query: 304 TKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNH-----------KFTVNVVRNLSQK 352
T + E G +H+G + T+ GD + P H K T VV ++
Sbjct: 396 TDVVSGEAGGITQHIGAYQVTMSSGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAAD 455
Query: 353 THWRIKTYLAISHLDVHKVNSIVA--DMRKVLAKNPQVEQQRLHRRVFLENINPESQSLN 410
+T AI H V IVA + K A +V Q+ L + E + + ++
Sbjct: 456 DGIMPQTVEAIRHAKAAGVPIIVAINKIDKPGATPEKVRQELLQHELVTEELGGDVLAIE 515
Query: 411 ILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSEPDLEN 465
+ + + EE + + +A +LDL A P R Q + E +E
Sbjct: 516 VSAKKRLNLEKLEEAILL-QAEILDL----------KANPTRAAQGVVVEAKMEK 559
>sp|Q67E00|DUSTY_XENTR Dual serine/threonine and tyrosine protein kinase OS=Xenopus
tropicalis GN=dstyk PE=2 SV=1
Length = 918
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 169 RELDPLVLPSETSQGVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEAND 221
+++D +V P +SQ V + ++V + +++ +A C L QQ ++ LTE +
Sbjct: 212 QDVDIVVSPCRSSQAVSMTLEDYVDHVQSIVVYAVCEERLSQQDEEELTEIKE 264
>sp|P09180|RL4_DROME 60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2
SV=2
Length = 401
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 415 CFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSEPDLENIPFADTIFT 474
F R V++ I L+ + RA +A RTV K+ ++ +N+ A + F
Sbjct: 312 VFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFA 371
Query: 475 H--SRAAANRPFLL 486
+ ++AAANR LL
Sbjct: 372 NVATKAAANRAKLL 385
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,660,580
Number of Sequences: 539616
Number of extensions: 7378372
Number of successful extensions: 22680
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 22646
Number of HSP's gapped (non-prelim): 34
length of query: 543
length of database: 191,569,459
effective HSP length: 122
effective length of query: 421
effective length of database: 125,736,307
effective search space: 52934985247
effective search space used: 52934985247
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)