Query 009110
Match_columns 543
No_of_seqs 368 out of 2212
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 19:03:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vv5_A MSCS, small-conductance 100.0 7.3E-45 2.5E-49 370.1 29.7 243 197-458 36-279 (286)
2 3udc_A Small-conductance mecha 100.0 1.1E-42 3.7E-47 354.0 35.3 217 228-459 61-279 (285)
3 2e6z_A Transcription elongatio 80.3 1.9 6.6E-05 32.5 4.3 46 294-341 6-56 (59)
4 1nz9_A Transcription antitermi 73.2 9.6 0.00033 28.2 6.4 26 294-320 3-30 (58)
5 2do3_A Transcription elongatio 73.1 8.9 0.0003 29.9 6.2 43 293-336 15-59 (69)
6 3udc_A Small-conductance mecha 60.5 34 0.0012 33.5 9.4 91 198-289 27-118 (285)
7 3mlq_E Transcription-repair co 42.7 35 0.0012 26.4 4.9 44 295-342 2-53 (71)
8 3cnr_A Type IV fimbriae assemb 42.4 26 0.00088 30.0 4.4 20 286-305 32-51 (117)
9 3exz_A MAOC-like dehydratase; 37.8 85 0.0029 27.3 7.4 16 289-304 85-100 (154)
10 3p8b_B Transcription antitermi 35.6 26 0.0009 31.0 3.6 27 294-321 90-118 (152)
11 3h0l_B Aspartyl/glutamyl-tRNA( 35.3 3.6E+02 0.012 28.5 12.7 147 286-448 90-245 (478)
12 1iq6_A (R)-hydratase, (R)-spec 32.3 1.3E+02 0.0045 24.7 7.5 26 286-318 78-103 (134)
13 2jvv_A Transcription antitermi 31.8 33 0.0011 31.2 3.6 27 293-320 125-153 (181)
14 4b6m_A Tubulin-specific chaper 30.5 45 0.0016 26.9 3.7 25 294-320 4-28 (84)
15 3ip4_B Aspartyl/glutamyl-tRNA( 29.4 5E+02 0.017 27.5 12.6 151 285-452 87-246 (483)
16 2vv5_A MSCS, small-conductance 28.6 4.1E+02 0.014 25.7 13.2 28 108-135 30-57 (286)
17 1q6w_A Monoamine oxidase regul 28.3 2.2E+02 0.0076 24.5 8.5 20 285-304 96-115 (161)
18 1txq_A Dynactin 1; protein com 24.1 65 0.0022 26.4 3.7 27 293-321 10-36 (93)
19 4hpv_A S-adenosylmethionine sy 23.6 3.6E+02 0.012 27.9 9.8 79 359-443 164-251 (407)
20 2k4k_A GSP13, general stress p 23.4 1.8E+02 0.0062 24.8 6.7 43 294-346 3-45 (130)
21 1whl_A Cylindromatosis tumor s 22.6 83 0.0028 25.8 4.1 28 294-321 6-35 (95)
22 1vq8_Q 50S ribosomal protein L 21.8 98 0.0034 25.5 4.3 34 294-328 32-76 (96)
23 2coy_A Dynactin-1; microtubule 21.4 76 0.0026 26.9 3.7 26 294-321 32-57 (112)
24 4e3e_A MAOC domain protein deh 21.4 2.4E+02 0.0083 28.2 8.3 16 289-304 92-107 (352)
No 1
>2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane struc membrane protein, membrane; 3.45A {Escherichia coli} SCOP: b.38.1.3 d.58.43.1 f.34.1.1 PDB: 2oau_A
Probab=100.00 E-value=7.3e-45 Score=370.09 Aligned_cols=243 Identities=18% Similarity=0.250 Sum_probs=221.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHh
Q 009110 197 TVLAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLA 276 (543)
Q Consensus 197 ~il~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~i~~l~~i~~~iv~vi~~~~~L~~lgi~~~~lla~~Gi~glalgfA 276 (543)
++++++|++.+++..+.+.+.++.+ .+.+..+++.+++++++++++++++|+.+|+++++++|++|++|+++|||
T Consensus 36 ~i~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~~i~~i~~~~~l~~~gi~~~~l~a~~g~~g~aig~a 110 (286)
T 2vv5_A 36 AIIIVGLIIARMISNAVNRLMISRK-----IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLA 110 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-----SCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 4557788888888776655444433 12345788999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhheeeeecCCccCCcEEEEeecCcceEEEEEEEcceeEEEEEeCCCcEEEEeCcccccCeEEEccCCCceE
Q 009110 277 GREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWR 356 (543)
Q Consensus 277 aq~~l~N~~aGi~I~~~rpfrVGD~I~i~i~g~~~~G~VeeIgl~sTT~ir~~d~~~v~IPNs~l~~~~I~N~sr~~~~r 356 (543)
+|++++|++||++|+++|||++||||++ +|.+|+|++|++++ |++|++||+.++|||+.+.+++|+|||+++.++
T Consensus 111 ~q~~l~n~~sGi~i~~~~pf~vGD~I~i----~g~~G~V~~I~l~~-T~i~t~dg~~v~IPNs~l~~~~i~N~s~~~~~r 185 (286)
T 2vv5_A 111 LQGSLSNLAAGVLLVMFRPFRAGEYVDL----GGVAGTVLSVQIFS-TTMRTADGKIIVIPNGKIIAGNIINFSREPVRR 185 (286)
T ss_dssp HTHHHHHHHHHHHHHTTCSSCTTCEEES----SSCEEEEEEECSSE-EEEECTTSCEEEEEHHHHHTSCEEESSSSSEEE
T ss_pred HHHHHHHHHhhhHHHhcCCccCCCEEEE----CCEEEEEEEEEeEE-EEEEeCCCCEEEechHHHhhCceEECCCCCcEE
Confidence 9999999999999999999999999998 78999999999999 999999999999999999999999999998889
Q ss_pred EEEEEEecc-CCHHHHHHHHHHHHHHHHcCCCccccccccEEEEEeeCCCCCeEEEEEEEEEecCChhhHHHHHHHHHHH
Q 009110 357 IKTYLAISH-LDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLNILVSCFVKTSRFEEYLCVKEAILLD 435 (543)
Q Consensus 357 i~~~l~v~y-td~e~v~~l~~~l~e~l~~~p~i~~~~~~p~v~v~~~~~~~~~l~i~V~~~v~~~~~~~~~~ir~~i~~~ 435 (543)
++++++++| +|+++++++ ++++++++|.+.+++. |.+.+.+++ ++++++++++|+++. +++++|++++++
T Consensus 186 ~~~~v~v~y~~d~~~v~~~---l~~~~~~~~~vl~~p~-p~v~v~~~~--~~~i~~~v~~~~~~~---~~~~~~~~l~~~ 256 (286)
T 2vv5_A 186 NEFIIGVAYDSDIDQVKQI---LTNIIQSEDRILKDRE-MTVRLNELG--ASSINFVVRVWSNSG---DLQNVYWDVLER 256 (286)
T ss_dssp EEEEEEECTTSCHHHHHHH---HHHHHHHCTTBCTTSC-EEEEEEEEC--SSSEEEEEEEEEETT---THHHHHHHHHHH
T ss_pred EEEEEEEcCCCCHHHHHHH---HHHHHHhCcccccCCC-CEEEEEEec--CCeEEEEEEEEEccc---hHHHHHHHHHHH
Confidence 999999999 899999988 8899999999887764 799999998 789999999999974 578999999999
Q ss_pred HHHHHHHCCCccCCCceEEEEec
Q 009110 436 LLHVISHHRARMATPIRTVQKIY 458 (543)
Q Consensus 436 i~~~l~~~gI~ia~P~~~v~~~~ 458 (543)
+++.|+++||++|||+++++...
T Consensus 257 i~~~~~~~gI~ip~P~~~v~~~~ 279 (286)
T 2vv5_A 257 IKREFDAAGISFPYPQMDVNFKR 279 (286)
T ss_dssp HHHHHHHHTCCCCCCEEEEEEEC
T ss_pred HHHHHHHCCCcCCCCceEEEecc
Confidence 99999999999999999999865
No 2
>3udc_A Small-conductance mechanosensitive channel, C-TER peptide from small-conductance...; membrane protein; 3.35A {Thermoanaerobacter tengcongensis} PDB: 3t9n_A*
Probab=100.00 E-value=1.1e-42 Score=353.99 Aligned_cols=217 Identities=17% Similarity=0.263 Sum_probs=192.9
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhchhhhhhhhhheeeeecCCccCCcEEEEeec
Q 009110 228 RNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQ 307 (543)
Q Consensus 228 ~~~~i~~l~~i~~~iv~vi~~~~~L~~lgi~~~~lla~~Gi~glalgfAaq~~l~N~~aGi~I~~~rpfrVGD~I~i~i~ 307 (543)
..++.+++++++++++++++++++|+.+|++.++++|++|++|+++|||+|++++|++||++|+++|||++||||++
T Consensus 61 ~~tl~~~~~~~~~~~i~~~~~~~~l~~~g~~~~~l~a~~g~~g~aig~a~q~~l~n~~~Gi~i~~~~pf~vGD~I~i--- 137 (285)
T 3udc_A 61 IDTLTSLTKNAVRYIIYFLAGASILKLFNIDMTSLLAVAGIGSLAIGFGAQNLVKDMISGFFIIFEDQFSVGDYVTI--- 137 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTSCCTTCEEEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCCCEEEE---
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEEEcceeEEEEEeCCCcEEEEeCcccccCeEEEccCCCceEEEEEEEecc-CCHHHHHHHHHHHHHHHH-cC
Q 009110 308 GYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISH-LDVHKVNSIVADMRKVLA-KN 385 (543)
Q Consensus 308 g~~~~G~VeeIgl~sTT~ir~~d~~~v~IPNs~l~~~~I~N~sr~~~~ri~~~l~v~y-td~e~v~~l~~~l~e~l~-~~ 385 (543)
+|.+|+|++|++++ |++|++||+.++|||+.+ +.++|||++. .+..++++++| +|.++++++++++.+.+. .+
T Consensus 138 -~~~~G~V~~I~l~~-T~i~t~d~~~v~iPN~~l--~~i~N~s~~~-~~~~~~v~v~~~~d~~~v~~~l~~i~~~~~~~~ 212 (285)
T 3udc_A 138 -NGISGTVEEIGLRV-TKIRGFSDGLHIIPNGEI--KMVTNLTKDS-MMAVVNIAFPIDEDVDKIIEGLQEICEEVKKSR 212 (285)
T ss_dssp -TTEEEEEEEECSSE-EEEEETTTEEEEEEGGGC--SCEEECSSSC-EEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHC
T ss_pred -CCEEEEEEEeeeeE-EEEecCCCCEEEeccccc--ccccccCCCC-ceEEEEEeeecCCCHHHHHHHHHHHHHHHHhcc
Confidence 78999999999999 999999999999999999 4699999865 45568999999 899999988665544443 34
Q ss_pred CCccccccccEEEEEeeCCCCCeEEEEEEEEEecCChhhHHHHHHHHHHHHHHHHHHCCCccCCCceEEEEecC
Q 009110 386 PQVEQQRLHRRVFLENINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYS 459 (543)
Q Consensus 386 p~i~~~~~~p~v~v~~~~~~~~~l~i~V~~~v~~~~~~~~~~ir~~i~~~i~~~l~~~gI~ia~P~~~v~~~~~ 459 (543)
+...+++ |.+.+.+++ |+++++++++|+++. +++++|+++++++++.|+++||++|||+|++|+...
T Consensus 213 ~~~~~~~--~~v~~~~~~--~s~i~~~v~~~~~~~---~~~~~~~~l~~~I~~~f~~~gI~ipfP~~~v~~~~~ 279 (285)
T 3udc_A 213 DDLIEGP--TVLGITDMQ--DSKLVIMVYAKTQPM---QKWAVERDIRYRVKKMFDQKNISFPYPQMDVNFKRV 279 (285)
T ss_dssp SSBSSCC--EEEEEEEEE--TTEEEEEEEEEESTT---CHHHHHHHHHHHHHHHHHHTTCCCCCCCCEEEEEEC
T ss_pred cccccCc--ccccccccC--CCEEEEEEEEEECcc---hHHHHHHHHHHHHHHHHHHCCCcCcCCCEEEEeCcC
Confidence 4433333 578899999 889999999999864 578999999999999999999999999999999763
No 3
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.32 E-value=1.9 Score=32.46 Aligned_cols=46 Identities=13% Similarity=0.245 Sum_probs=30.7
Q ss_pred CCccCCcEEEEeecC--cceEEEEEEEcceeEEEEEeC---CCcEEEEeCccc
Q 009110 294 QPFVINEWIQTKIQG--YEVSGTVEHVGWWSPTIIRGD---DREAVHIPNHKF 341 (543)
Q Consensus 294 rpfrVGD~I~i~i~g--~~~~G~VeeIgl~sTT~ir~~---d~~~v~IPNs~l 341 (543)
-.|.+||.|+| ++| .|..|.|+++.--. .++.-. =.+.+-+|++++
T Consensus 6 ~~f~~GD~V~V-~~Gpf~g~~G~V~evd~e~-v~V~v~~fg~~tpvel~~~qv 56 (59)
T 2e6z_A 6 SGFQPGDNVEV-CEGELINLQGKILSVDGNK-ITIMPKHEDLKDMLEFPAQEL 56 (59)
T ss_dssp SSCCTTSEEEE-CSSTTTTCEEEECCCBTTE-EEEEECCSSCCSCEEEETTTE
T ss_pred ccCCCCCEEEE-eecCCCCCEEEEEEEeCCE-EEEEEEecCCCceEEEcHHHE
Confidence 36999999999 454 36899999998643 444431 134566666654
No 4
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=73.19 E-value=9.6 Score=28.17 Aligned_cols=26 Identities=19% Similarity=0.378 Sum_probs=21.1
Q ss_pred CCccCCcEEEEeecC--cceEEEEEEEcc
Q 009110 294 QPFVINEWIQTKIQG--YEVSGTVEHVGW 320 (543)
Q Consensus 294 rpfrVGD~I~i~i~g--~~~~G~VeeIgl 320 (543)
-+|++||.|++ ++| .|.+|.|++++.
T Consensus 3 ~~~~~Gd~V~V-~~Gpf~g~~g~v~~v~~ 30 (58)
T 1nz9_A 3 VAFREGDQVRV-VSGPFADFTGTVTEINP 30 (58)
T ss_dssp CSCCTTCEEEE-CSGGGTTCEEEEEEEET
T ss_pred cccCCCCEEEE-eecCCCCcEEEEEEEcC
Confidence 36899999998 554 268999999975
No 5
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=73.08 E-value=8.9 Score=29.89 Aligned_cols=43 Identities=12% Similarity=0.149 Sum_probs=28.4
Q ss_pred cCCccCCcEEEEeecC--cceEEEEEEEcceeEEEEEeCCCcEEEE
Q 009110 293 TQPFVINEWIQTKIQG--YEVSGTVEHVGWWSPTIIRGDDREAVHI 336 (543)
Q Consensus 293 ~rpfrVGD~I~i~i~g--~~~~G~VeeIgl~sTT~ir~~d~~~v~I 336 (543)
.+-|++||.|.+ ++| .|..|.|.++.=-..|.+-+..++-+.|
T Consensus 15 rK~F~~GDHVkV-i~G~~~getGlVV~v~~d~v~v~SD~t~~Ei~V 59 (69)
T 2do3_A 15 RKYFKMGDHVKV-IAGRFEGDTGLIVRVEENFVILFSDLTMHELKV 59 (69)
T ss_dssp CSSCCTTCEEEE-SSSTTTTCEEEEEEECSSCEEEEESSSCSEEEE
T ss_pred eeeccCCCeEEE-eccEEcCceEEEEEEeCCEEEEEeCCCCCEEEE
Confidence 478999999998 665 3678999888643324444444444433
No 6
>3udc_A Small-conductance mechanosensitive channel, C-TER peptide from small-conductance...; membrane protein; 3.35A {Thermoanaerobacter tengcongensis} PDB: 3t9n_A*
Probab=60.46 E-value=34 Score=33.53 Aligned_cols=91 Identities=8% Similarity=-0.057 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhhhhchHHHHHHHHH-HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHh
Q 009110 198 VLAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFAGKAVY-TAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLA 276 (543)
Q Consensus 198 il~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~i~~l~~i~~-~iv~vi~~~~~L~~lgi~~~~lla~~Gi~glalgfA 276 (543)
+++++|+..++.+.+.+.+.+..............+.+.++++ ++-+++.++.++..++.=-.. ++++-+++.++|+|
T Consensus 27 ~lii~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~~~~~i~~~~~~~~l~~~g~~-~~~l~a~~g~~g~a 105 (285)
T 3udc_A 27 ILIIAFIGIKFADFLIYRFYKLYSKSKIQLPQRKIDTLTSLTKNAVRYIIYFLAGASILKLFNID-MTSLLAVAGIGSLA 105 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHH
Confidence 3344444445444444333332221111222333555566554 445555556666666532223 34455555568899
Q ss_pred chhhhhhhhhhee
Q 009110 277 GREIFTNFLSSVM 289 (543)
Q Consensus 277 aq~~l~N~~aGi~ 289 (543)
..=.+++.++.++
T Consensus 106 ig~a~q~~l~n~~ 118 (285)
T 3udc_A 106 IGFGAQNLVKDMI 118 (285)
T ss_dssp HHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9888899998874
No 7
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=42.66 E-value=35 Score=26.43 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=17.7
Q ss_pred CccCCcEEEEeecCcceEEEEEEEcc--------eeEEEEEeCCCcEEEEeCcccc
Q 009110 295 PFVINEWIQTKIQGYEVSGTVEHVGW--------WSPTIIRGDDREAVHIPNHKFT 342 (543)
Q Consensus 295 pfrVGD~I~i~i~g~~~~G~VeeIgl--------~sTT~ir~~d~~~v~IPNs~l~ 342 (543)
||++||+|.- ...| -|+++.|.- -+ -.++=.++..++||-.++.
T Consensus 2 ~l~~GD~VVh--~~hG-iG~~~gi~~~~v~g~~~ey-~~l~y~~~~~l~VPv~~~~ 53 (71)
T 3mlq_E 2 PHMPGDYLIH--PEHG-VGQYLGLETREVLGVKRDY-LVLRYKGEGKLYLPVEQLP 53 (71)
T ss_dssp -----------------CEEEEEEEEEEETTEEEEE-EEEEETTTEEEEEESSSCC
T ss_pred cCCCCCEEEE--CCCe-eEEEeEEEEEEeCCeeEEE-EEEEECCCCEEEEEhhhhc
Confidence 7999999985 2122 255554432 23 3455557778888888764
No 8
>3cnr_A Type IV fimbriae assembly protein; PILZ, xanthomonas citri, type IV pilus assembly, unknown function; HET: MSE; 1.90A {Xanthomonas axonopodis PV} PDB: 3dsg_A
Probab=42.45 E-value=26 Score=30.00 Aligned_cols=20 Identities=0% Similarity=0.239 Sum_probs=18.0
Q ss_pred hheeeeecCCccCCcEEEEe
Q 009110 286 SSVMIHATQPFVINEWIQTK 305 (543)
Q Consensus 286 aGi~I~~~rpfrVGD~I~i~ 305 (543)
||++|-.++|+++||.|.+.
T Consensus 32 GGlFI~T~~~~~~G~~V~l~ 51 (117)
T 3cnr_A 32 GGIFVPTPKRYMLGDEVFLL 51 (117)
T ss_dssp CEEEEECCSCCCTTCEEEEE
T ss_pred CeEEEeeCCccCCCCEEEEE
Confidence 67999999999999988874
No 9
>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}
Probab=37.76 E-value=85 Score=27.33 Aligned_cols=16 Identities=6% Similarity=0.032 Sum_probs=14.2
Q ss_pred eeeecCCccCCcEEEE
Q 009110 289 MIHATQPFVINEWIQT 304 (543)
Q Consensus 289 ~I~~~rpfrVGD~I~i 304 (543)
-+-+.+|..+||.+.+
T Consensus 85 ~~rF~~PV~~GD~L~~ 100 (154)
T 3exz_A 85 ELSWPNPTRPGDELHV 100 (154)
T ss_dssp EEECSSCCCTTCEEEE
T ss_pred EEEEcCCCCCCCEEEE
Confidence 5778999999999986
No 10
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D
Probab=35.62 E-value=26 Score=31.00 Aligned_cols=27 Identities=11% Similarity=0.097 Sum_probs=21.5
Q ss_pred CCccCCcEEEEeecC--cceEEEEEEEcce
Q 009110 294 QPFVINEWIQTKIQG--YEVSGTVEHVGWW 321 (543)
Q Consensus 294 rpfrVGD~I~i~i~g--~~~~G~VeeIgl~ 321 (543)
..|++||+|++ ++| .|..|.|++++-.
T Consensus 90 ~~~~~Gd~VrI-~~Gpf~g~~g~V~~vd~~ 118 (152)
T 3p8b_B 90 SGLEPGDLVEV-IAGPFKGQKAKVVKIDES 118 (152)
T ss_dssp TTCCTTCEEEE-CSSTTTTCEEEEEEEETT
T ss_pred ccCCCCCEEEE-eeecCCCCEEEEEEEeCC
Confidence 46999999998 444 3688999999753
No 11
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=35.32 E-value=3.6e+02 Score=28.54 Aligned_cols=147 Identities=11% Similarity=0.160 Sum_probs=92.6
Q ss_pred hheeee-ecCCccCCcEEEEeecCcceEEEEEEEcceeEEEEEeCCCcEEEEeCcccccCeEEEccCCCceEEEEEEEec
Q 009110 286 SSVMIH-ATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAIS 364 (543)
Q Consensus 286 aGi~I~-~~rpfrVGD~I~i~i~g~~~~G~VeeIgl~sTT~ir~~d~~~v~IPNs~l~~~~I~N~sr~~~~ri~~~l~v~ 364 (543)
.|.+|- ++.|+-.|=+|.+..++ |...+|++.. ..++-+.|+.++-+ +.....+.|.+---+++.=.=+
T Consensus 90 kgYQITQ~~~Pia~~G~l~i~~~~----g~~k~I~I~r-ihlEEDagK~~h~~-----~~slvD~NRaGvPLiEIVTePd 159 (478)
T 3h0l_B 90 KGYQISQYEKPLATNGWVELNLPN----GEKKKVRIRR-LHIEEDAGKNIHEG-----DKTLVDLNRAGTPLMEIVTEPD 159 (478)
T ss_dssp TSEEEEESSSCSEEEEEEEEECTT----SCEEEEEEEE-EEEEECCCEEEEET-----TEEEEECSSTTCEEEEEEECTT
T ss_pred cccchhccccCeecCCEEEEEecC----CceEEEeeEE-EEecccccccccCC-----CceEEecCCCCCceEEEecCCC
Confidence 688887 67899999999984332 4457899998 99999999999872 3466778888765555433334
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCCcccccc--ccEE----EEEeeCCCCCeEEEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 009110 365 HLDVHKVNSIVADMRKVLAKNPQVEQQRL--HRRV----FLENINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLH 438 (543)
Q Consensus 365 ytd~e~v~~l~~~l~e~l~~~p~i~~~~~--~p~v----~v~~~~~~~~~l~i~V~~~v~~~~~~~~~~ir~~i~~~i~~ 438 (543)
..+.+++++.+++++.+++...-.+.+.. .-|| .+...|.. .+--++-+++.+ .+..++..+..++.+
T Consensus 160 ~~s~eeA~a~~~~L~~ilr~lgvsd~~meeGslR~DvNVSvr~~g~~----~~GtRvEiKNln--S~~~v~~AI~yEi~R 233 (478)
T 3h0l_B 160 IRTPEEARLFLEKLRNIMRYAGVSKADMEKGQLRCDINVSIRPKGSK----EFGTRVEIKNVN--SFRFVQKALEYEIER 233 (478)
T ss_dssp BCSHHHHHHHHHHHHHHHHHHTSCCCCGGGTSEEEEEEEEEEETTCC----SCCCCEEEECCC--SHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCccccccCceEeeeeEEeccCCCC----CCcceEEEeccc--cHHHHHHHHHHHHHH
Confidence 57999999999999998886543232111 0122 22222211 122345556543 456666666666655
Q ss_pred HHH--HCCCccC
Q 009110 439 VIS--HHRARMA 448 (543)
Q Consensus 439 ~l~--~~gI~ia 448 (543)
..+ +.|-++.
T Consensus 234 Q~~~le~Gg~V~ 245 (478)
T 3h0l_B 234 QINVVEEGGEVV 245 (478)
T ss_dssp HHHHHHTTCCCC
T ss_pred HHHHHHcCCCee
Confidence 432 3554543
No 12
>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4
Probab=32.28 E-value=1.3e+02 Score=24.74 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=19.8
Q ss_pred hheeeeecCCccCCcEEEEeecCcceEEEEEEE
Q 009110 286 SSVMIHATQPFVINEWIQTKIQGYEVSGTVEHV 318 (543)
Q Consensus 286 aGi~I~~~rpfrVGD~I~i~i~g~~~~G~VeeI 318 (543)
++.-+-+.+|..+||.+.+ .++|.++
T Consensus 78 ~~~~~rf~~Pv~~Gd~l~~-------~~~v~~~ 103 (134)
T 1iq6_A 78 LGQSLSFKLPVFVGDEVTA-------EVEVTAL 103 (134)
T ss_dssp EEEEEEECSCCBTTCEEEE-------EEEEEEE
T ss_pred EEEEEEEcCCCCCCCEEEE-------EEEEEEE
Confidence 4566788999999999986 4566554
No 13
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=31.82 E-value=33 Score=31.25 Aligned_cols=27 Identities=26% Similarity=0.442 Sum_probs=21.7
Q ss_pred cCCccCCcEEEEeecC--cceEEEEEEEcc
Q 009110 293 TQPFVINEWIQTKIQG--YEVSGTVEHVGW 320 (543)
Q Consensus 293 ~rpfrVGD~I~i~i~g--~~~~G~VeeIgl 320 (543)
.-+|.+||.|+| ++| .|..|+|++++-
T Consensus 125 ~~~~~~Gd~V~V-~~GPf~g~~G~v~~v~~ 153 (181)
T 2jvv_A 125 KTLFEPGEMVRV-NDGPFADFNGVVEEVDY 153 (181)
T ss_dssp CCCCCTTEEEEE-CSSTTTTEEEEEEEEET
T ss_pred cccCCCCCEEEE-eccCCCCcEEEEEEEeC
Confidence 347999999999 554 378999999963
No 14
>4b6m_A Tubulin-specific chaperone, putative; structural protein; 1.59A {Trypanosoma brucei}
Probab=30.46 E-value=45 Score=26.86 Aligned_cols=25 Identities=16% Similarity=0.227 Sum_probs=19.0
Q ss_pred CCccCCcEEEEeecCcceEEEEEEEcc
Q 009110 294 QPFVINEWIQTKIQGYEVSGTVEHVGW 320 (543)
Q Consensus 294 rpfrVGD~I~i~i~g~~~~G~VeeIgl 320 (543)
+.++|||+|++ .+++..|+|.-||-
T Consensus 4 ~~i~vG~Rv~v--~~~~~~G~VryvG~ 28 (84)
T 4b6m_A 4 ETIHVGDRCLC--RPGDRLGSVRFVGR 28 (84)
T ss_dssp -CCCTTCEEEE--TTTTEEEEEEEEEE
T ss_pred cCcccCCEEEE--cCCCeEEEEEEEec
Confidence 45899999997 43467899988873
No 15
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=29.37 E-value=5e+02 Score=27.47 Aligned_cols=151 Identities=12% Similarity=0.124 Sum_probs=94.6
Q ss_pred hhheeee-ecCCccCCcEEEEeecCcceEEEEEEEcceeEEEEEeCCCcEEEEeCcccccCeEEEccCCCceEEEEEEEe
Q 009110 285 LSSVMIH-ATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAI 363 (543)
Q Consensus 285 ~aGi~I~-~~rpfrVGD~I~i~i~g~~~~G~VeeIgl~sTT~ir~~d~~~v~IPNs~l~~~~I~N~sr~~~~ri~~~l~v 363 (543)
=.|.+|- ++.|+-.|=+|.+..+ |.-.+|++.. ..++-+.|+.+.-.+ .....+.|.+---+.+.=.=
T Consensus 87 PkgYQITQ~~~Pia~~G~l~i~~~-----~~~k~I~I~r-ihlEEDagK~~h~~~-----~slvD~NRaGvPLiEIVTeP 155 (483)
T 3ip4_B 87 PKAYQISQFDQPIGENGYIDIEVD-----GETKRIGITR-LHMEEDAGKSTHKGE-----YSLVDLNRQGTPLIEIVSEP 155 (483)
T ss_dssp TTSEEEECSSSCSEEEEEEEECSS-----SSCEEEEEEE-EEEEECCCEEEEETT-----EEEEECTTTTCEEEEEEECS
T ss_pred CcCccccccccCeecCCEEEEEec-----CceEEEeEEE-EeecchhhhhccCCC-----ceEEecCCCCCceEEEecCC
Confidence 3688887 6789999999998322 2236799988 999999999998643 46678888876555554444
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCCcccccc--ccEE----EEEeeCCCCCeEEEEEEEEEecCChhhHHHHHHHHHHHHH
Q 009110 364 SHLDVHKVNSIVADMRKVLAKNPQVEQQRL--HRRV----FLENINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLL 437 (543)
Q Consensus 364 ~ytd~e~v~~l~~~l~e~l~~~p~i~~~~~--~p~v----~v~~~~~~~~~l~i~V~~~v~~~~~~~~~~ir~~i~~~i~ 437 (543)
+..+.+++++.+++++.+++...-.+.+.. .-|| .+...|.. .+--++-+++.+ .+..++..+..++.
T Consensus 156 d~~s~eeA~a~~~~L~~ilr~lgvsd~~meeGslR~DvNVSvr~~g~~----~~GtRvEiKNln--S~~~v~~AI~yEi~ 229 (483)
T 3ip4_B 156 DIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQE----KFGTKAELKNLN--SFNYVRKGLEYEEK 229 (483)
T ss_dssp CBCSHHHHHHHHHHHHHHHHHHTSCCCCGGGTSEEEEEEEEEEETTSC----CCCCEEEEECCC--SHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCCCcccCceEeeeeEeecCCCCC----CCcceEEEeccc--CHHHHHHHHHHHHH
Confidence 457999999999999999886542222111 0122 22222211 122355566553 35666666666665
Q ss_pred HHHH--HCCCccCCCce
Q 009110 438 HVIS--HHRARMATPIR 452 (543)
Q Consensus 438 ~~l~--~~gI~ia~P~~ 452 (543)
+..+ +.|-++.-++|
T Consensus 230 RQ~~~le~Gg~v~qETR 246 (483)
T 3ip4_B 230 RQEEELLNGGEIGQETR 246 (483)
T ss_dssp HHHHHHHHTCCCCEEEE
T ss_pred HHHHHHHcCCcEeccce
Confidence 5433 35555544444
No 16
>2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane struc membrane protein, membrane; 3.45A {Escherichia coli} SCOP: b.38.1.3 d.58.43.1 f.34.1.1 PDB: 2oau_A
Probab=28.59 E-value=4.1e+02 Score=25.65 Aligned_cols=28 Identities=7% Similarity=0.093 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009110 108 RLIPAAALVAFAAWGLVPLVRLGRTIFL 135 (543)
Q Consensus 108 ~ll~al~i~~~a~~~~~~l~~~~~~~~~ 135 (543)
+++.+++++++++++.+++.+.+.+.+.
T Consensus 30 ~i~~~~~i~~i~~~~~~~~~~~~~~~~~ 57 (286)
T 2vv5_A 30 NIVAALAIIIVGLIIARMISNAVNRLMI 57 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666665555555544443
No 17
>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4
Probab=28.34 E-value=2.2e+02 Score=24.50 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=17.2
Q ss_pred hhheeeeecCCccCCcEEEE
Q 009110 285 LSSVMIHATQPFVINEWIQT 304 (543)
Q Consensus 285 ~aGi~I~~~rpfrVGD~I~i 304 (543)
..|+-+-+.+|..+||.+.+
T Consensus 96 ~~~~~~rF~~PV~~Gd~l~~ 115 (161)
T 1q6w_A 96 FGIKDVRFLRPVFIGDTIAA 115 (161)
T ss_dssp EEEEEEEECSCCBTTCEEEE
T ss_pred ceeEEEEEecCCCCCCEEEE
Confidence 56677889999999999986
No 18
>1txq_A Dynactin 1; protein complex, structural protein/protein binding complex; 1.80A {Homo sapiens} SCOP: b.34.10.1 PDB: 2hqh_A 2hkq_B 2hkn_A 2pzo_A 3e2u_A 2hl5_C 2hl3_A 3tq7_P
Probab=24.08 E-value=65 Score=26.37 Aligned_cols=27 Identities=26% Similarity=0.364 Sum_probs=20.3
Q ss_pred cCCccCCcEEEEeecCcceEEEEEEEcce
Q 009110 293 TQPFVINEWIQTKIQGYEVSGTVEHVGWW 321 (543)
Q Consensus 293 ~rpfrVGD~I~i~i~g~~~~G~VeeIgl~ 321 (543)
.+.+++||+|++ .+.+..|+|.-||-.
T Consensus 10 ~~~~~vG~rv~v--~~~~~~GtVryvG~~ 36 (93)
T 1txq_A 10 ARPLRVGSRVEV--IGKGHRGTVAYVGAT 36 (93)
T ss_dssp -CCCCTTCEEEE--TTTCCEEEEEEEECC
T ss_pred cccCCCCCEEEE--CCCCeEEEEEEeeec
Confidence 357999999997 333578999888864
No 19
>4hpv_A S-adenosylmethionine synthase; structural genomics, PSI-biology; 2.21A {Sulfolobus solfataricus P2}
Probab=23.58 E-value=3.6e+02 Score=27.85 Aligned_cols=79 Identities=15% Similarity=0.304 Sum_probs=55.9
Q ss_pred EEEEeccCCHHHHHHHHHHHHHHHHc------CCCccccccccEEEEEeeCCCCCeEEEEEEEEEecC---ChhhHHHHH
Q 009110 359 TYLAISHLDVHKVNSIVADMRKVLAK------NPQVEQQRLHRRVFLENINPESQSLNILVSCFVKTS---RFEEYLCVK 429 (543)
Q Consensus 359 ~~l~v~ytd~e~v~~l~~~l~e~l~~------~p~i~~~~~~p~v~v~~~~~~~~~l~i~V~~~v~~~---~~~~~~~ir 429 (543)
+.++|.|.|....++++-++++.|.+ +|.+=.+ +.+-.+-. +..++++|-+-.-+. +-++|.+.+
T Consensus 164 TS~gVGyAPlS~~E~~Vl~~E~~Lns~~~k~~~P~~GeD-----IKVMG~R~-g~~i~LTvA~a~v~r~v~~~~~Y~~~K 237 (407)
T 4hpv_A 164 TSFGVGFAPLTKLEKLVYETERHLNSKQFKAKLPEVGED-----IKVMGLRR-GNEVDLTIAMATISELIEDVNHYINVK 237 (407)
T ss_dssp CCEEEEEESCCHHHHHHHHHHHHHHSHHHHHHCTTEEEE-----EEEEEEEE-TTEEEEEEEEEEEGGGCCSHHHHHHHH
T ss_pred cCceeccCCCCHHHHHHHHHHHHhcchhhhhhCcccCCc-----eEEEEEee-CCeEEEEEEhhhhhhhhCCHHHHHHHH
Confidence 57888998888888888888888865 4554332 23333321 446777776665543 667999999
Q ss_pred HHHHHHHHHHHHHC
Q 009110 430 EAILLDLLHVISHH 443 (543)
Q Consensus 430 ~~i~~~i~~~l~~~ 443 (543)
+++.+.+.+...+.
T Consensus 238 ~~v~~~v~~~a~~~ 251 (407)
T 4hpv_A 238 EQVRNQILDLASKI 251 (407)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987753
No 20
>2k4k_A GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=23.39 E-value=1.8e+02 Score=24.76 Aligned_cols=43 Identities=14% Similarity=0.170 Sum_probs=31.1
Q ss_pred CCccCCcEEEEeecCcceEEEEEEEcceeEEEEEeCCCcEEEEeCcccccCeE
Q 009110 294 QPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVV 346 (543)
Q Consensus 294 rpfrVGD~I~i~i~g~~~~G~VeeIgl~sTT~ir~~d~~~v~IPNs~l~~~~I 346 (543)
..+++||.+. |+|..|.=.- ..++..++..=.||.+.+....+
T Consensus 3 ~~~~vG~iv~---------G~V~~i~~~G-~FV~l~~~~~Glihisel~~~~~ 45 (130)
T 2k4k_A 3 AKFEVGSVYT---------GKVTGLQAYG-AFVALDEETQGLVHISEVTHGFV 45 (130)
T ss_dssp CCCCTTCEEE---------EEEEEEETTE-EEEEEETTEEEEEEGGGTSSSCC
T ss_pred CcCCCCCEEE---------EEEEEEeCCe-EEEEECCCcEEEEEHHHCCcccc
Confidence 3578888653 7888886665 67777778888888888875443
No 21
>1whl_A Cylindromatosis tumor suppressor CYLD; deubiquitinating enzyme, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=22.63 E-value=83 Score=25.76 Aligned_cols=28 Identities=11% Similarity=0.120 Sum_probs=20.8
Q ss_pred CCccCCcEEEEeecCc--ceEEEEEEEcce
Q 009110 294 QPFVINEWIQTKIQGY--EVSGTVEHVGWW 321 (543)
Q Consensus 294 rpfrVGD~I~i~i~g~--~~~G~VeeIgl~ 321 (543)
..++|||+|++..+++ +..|+|.-||-.
T Consensus 6 ~~~~VG~rV~V~~~~~~~~~~GtVryvG~v 35 (95)
T 1whl_A 6 SGIDVGCPVKVQLRSGEEKFPGVVRFRGPL 35 (95)
T ss_dssp CCCCSSCEEEEECSSSSCEEEEEEEEECCC
T ss_pred ccCcCCCEEEEecCCCccceeEEEEEeCcc
Confidence 4699999999832332 478999988864
No 22
>1vq8_Q 50S ribosomal protein L21E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_Q* 1vq5_Q* 1vq6_Q* 1vq7_Q* 1s72_Q* 1vq9_Q* 1vqk_Q* 1vql_Q* 1vqm_Q* 1vqn_Q* 1vqo_Q* 1vqp_Q* 1yhq_Q* 1yi2_Q* 1yij_Q* 1yit_Q* 1yj9_Q* 1yjn_Q* 1yjw_Q* 2otj_Q* ...
Probab=21.82 E-value=98 Score=25.53 Aligned_cols=34 Identities=24% Similarity=0.071 Sum_probs=25.0
Q ss_pred CCccCCcEEEEeecCc-----------ceEEEEEEEcceeEEEEEe
Q 009110 294 QPFVINEWIQTKIQGY-----------EVSGTVEHVGWWSPTIIRG 328 (543)
Q Consensus 294 rpfrVGD~I~i~i~g~-----------~~~G~VeeIgl~sTT~ir~ 328 (543)
+-|++||.|.|++++. |-.|+|..++=++ ..+..
T Consensus 32 ~~yk~Gd~VdIk~~~svqKGmPhk~yHGkTG~V~~v~~~A-vgV~V 76 (96)
T 1vq8_Q 32 EEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDA-YKVDI 76 (96)
T ss_dssp CCCCTTCEEEECCCTTCCSSCCCGGGTTCEEEEEEEETTE-EEEEE
T ss_pred HHcCCCCEEEEEecCCccCCCCcccCCCCCeEEEeECCCE-EEEEE
Confidence 5699999999976542 3478898887777 55544
No 23
>2coy_A Dynactin-1; microtubule binding, cytoskeleton associated protein, P150- glued, DAP-150, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=21.39 E-value=76 Score=26.93 Aligned_cols=26 Identities=27% Similarity=0.371 Sum_probs=20.2
Q ss_pred CCccCCcEEEEeecCcceEEEEEEEcce
Q 009110 294 QPFVINEWIQTKIQGYEVSGTVEHVGWW 321 (543)
Q Consensus 294 rpfrVGD~I~i~i~g~~~~G~VeeIgl~ 321 (543)
+.++|||+|++ .+.+..|+|.-||-.
T Consensus 32 ~~l~VG~RV~V--~~~g~~GtVRyvG~v 57 (112)
T 2coy_A 32 RPLRVGSRVEV--IGKGHRGTVAYVGAT 57 (112)
T ss_dssp CCCCTTCEEEE--TTTCCEEEEEEEECC
T ss_pred ccCCCCCEEEE--CCCCeEEEEEEeeec
Confidence 57999999998 333578999888854
No 24
>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}
Probab=21.37 E-value=2.4e+02 Score=28.21 Aligned_cols=16 Identities=6% Similarity=-0.232 Sum_probs=14.0
Q ss_pred eeeecCCccCCcEEEE
Q 009110 289 MIHATQPFVINEWIQT 304 (543)
Q Consensus 289 ~I~~~rpfrVGD~I~i 304 (543)
-+-+.+|..+||.+.+
T Consensus 92 ~~rF~~PV~~GDtL~~ 107 (352)
T 4e3e_A 92 GGRFGAVVYPGDTLST 107 (352)
T ss_dssp EEEECSCCCTTCEEEE
T ss_pred eEEEcCCcCCCCEEEE
Confidence 4678999999999986
Done!