Query 009115
Match_columns 543
No_of_seqs 264 out of 2214
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 19:10:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009115.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009115hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 3.4E-90 1.2E-94 743.1 48.0 506 28-538 3-517 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3.1E-86 1.1E-90 710.8 46.3 488 31-534 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 6.9E-82 2.4E-86 682.9 43.7 492 25-535 4-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 1.5E-75 5.2E-80 626.8 38.9 456 31-534 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 5.8E-73 2E-77 609.3 40.4 455 44-533 6-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 8E-69 2.7E-73 581.5 41.8 460 32-533 23-523 (523)
7 2y3s_A TAML; oxidoreductase; H 100.0 8.1E-68 2.8E-72 574.0 43.3 469 31-534 16-528 (530)
8 1zr6_A Glucooligosaccharide ox 100.0 4.4E-68 1.5E-72 573.9 38.7 464 26-539 3-483 (503)
9 2ipi_A Aclacinomycin oxidoredu 100.0 3.2E-67 1.1E-71 569.1 45.4 462 30-534 19-520 (521)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 8.2E-65 2.8E-69 543.7 36.2 439 46-533 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 4.1E-41 1.4E-45 366.5 32.9 226 28-272 30-266 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 6.7E-35 2.3E-39 316.1 34.6 200 70-276 53-263 (524)
13 4bby_A Alkyldihydroxyacetoneph 100.0 7.8E-35 2.7E-39 323.7 22.2 205 71-276 198-409 (658)
14 4feh_A Oxidoreductase DPRE1; a 100.0 1.2E-32 4.2E-37 294.5 32.5 198 70-277 35-238 (481)
15 1wvf_A 4-cresol dehydrogenase 100.0 5.3E-32 1.8E-36 293.8 34.9 199 75-279 53-268 (520)
16 3pm9_A Putative oxidoreductase 100.0 5.8E-33 2E-37 296.9 20.6 205 69-277 42-253 (476)
17 2vfr_A Xylitol oxidase, aldito 100.0 1.2E-31 4E-36 284.0 26.0 175 70-257 12-189 (422)
18 2uuu_A Alkyldihydroxyacetoneph 100.0 6.1E-32 2.1E-36 295.4 20.8 206 71-277 130-340 (584)
19 1e8g_A Vanillyl-alcohol oxidas 100.0 9.7E-29 3.3E-33 270.0 25.1 200 75-279 67-300 (560)
20 2i0k_A Oxidoreductase; MIX alp 100.0 8.1E-30 2.8E-34 278.2 16.0 206 47-263 9-233 (561)
21 3js8_A Cholesterol oxidase; ch 100.0 4E-29 1.4E-33 267.4 15.5 190 54-255 11-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 6.4E-29 2.2E-33 269.7 15.1 200 71-276 39-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.7E-25 5.8E-30 226.6 13.8 162 75-253 51-217 (322)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.2E-24 4.2E-29 221.6 12.4 159 75-251 45-209 (326)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 2.3E-24 7.8E-29 220.5 14.2 165 74-253 26-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 9.3E-23 3.2E-27 208.0 17.9 164 75-253 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 2.3E-21 7.8E-26 191.0 13.4 152 76-252 20-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 1.5E-19 5.1E-24 173.1 8.9 119 138-262 1-125 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 3.1E-06 1.1E-10 84.2 8.4 158 77-252 3-178 (287)
30 1n62_C Carbon monoxide dehydro 97.5 9.7E-05 3.3E-09 73.3 5.8 154 77-251 3-177 (288)
31 2w3s_A Xanthine dehydrogenase; 97.1 0.0002 7E-09 75.5 3.8 154 81-250 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 94.4 0.059 2E-06 53.1 6.7 151 77-249 3-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 94.1 0.044 1.5E-06 54.5 5.1 154 78-250 9-190 (305)
34 3hrd_C Nicotinate dehydrogenas 93.0 0.13 4.6E-06 50.7 6.4 78 79-160 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.6 0.38 1.3E-05 48.1 5.6 75 77-161 4-84 (324)
36 4bby_A Alkyldihydroxyacetoneph 76.6 1.1 3.7E-05 49.3 2.6 29 499-527 625-654 (658)
37 3unc_A Xanthine dehydrogenase/ 73.5 3 0.0001 49.5 5.4 81 78-163 232-313 (1332)
38 1e8g_A Vanillyl-alcohol oxidas 61.2 10 0.00036 40.5 6.2 25 507-531 523-547 (560)
39 3pm9_A Putative oxidoreductase 50.9 6.4 0.00022 41.3 2.3 30 498-527 442-472 (476)
40 2i0k_A Oxidoreductase; MIX alp 45.4 7.8 0.00027 41.6 1.9 22 507-528 533-554 (561)
41 3zyv_A AOH1; oxidoreductase, m 41.5 16 0.00056 43.4 4.0 76 81-164 242-321 (1335)
42 1rzw_A Protein AF2095(GR4); be 39.7 41 0.0014 28.2 5.1 37 77-113 47-84 (123)
43 1f0x_A DLDH, D-lactate dehydro 38.9 14 0.00049 39.6 2.7 27 506-533 536-562 (571)
44 1wn2_A Peptidyl-tRNA hydrolase 35.8 60 0.0021 27.0 5.6 38 76-113 53-91 (121)
45 1xty_A PTH, peptidyl-tRNA hydr 35.4 63 0.0022 26.8 5.6 42 70-113 48-90 (120)
46 2zv3_A PTH, peptidyl-tRNA hydr 34.4 61 0.0021 26.6 5.4 38 76-113 47-85 (115)
47 1rlk_A Hypothetical protein TA 34.2 62 0.0021 26.7 5.4 38 76-113 49-87 (117)
48 3js8_A Cholesterol oxidase; ch 32.4 15 0.00051 39.1 1.5 23 506-528 511-533 (540)
49 2uuu_A Alkyldihydroxyacetoneph 32.0 17 0.00057 39.2 1.9 28 500-527 552-580 (584)
50 1q7s_A BIT1, protein CGI-147; 28.1 94 0.0032 25.5 5.5 36 77-112 50-86 (117)
51 2kxh_B Peptide of FAR upstream 26.2 39 0.0013 20.7 1.9 20 504-523 9-28 (31)
52 2g2c_A Putative molybdenum cof 26.2 1.1E+02 0.0037 26.7 6.0 40 80-119 47-86 (167)
53 1mkz_A Molybdenum cofactor bio 23.1 1.4E+02 0.0048 26.2 6.0 39 80-118 46-85 (172)
54 2crl_A Copper chaperone for su 23.0 1.8E+02 0.0061 22.5 6.2 33 138-170 49-81 (98)
55 3rfq_A Pterin-4-alpha-carbinol 22.4 1.4E+02 0.0049 26.6 6.0 39 80-118 67-105 (185)
56 2pjk_A 178AA long hypothetical 21.3 1.4E+02 0.0049 26.3 5.8 39 80-118 58-97 (178)
57 3fbi_A Mediator of RNA polymer 21.2 33 0.0011 26.6 1.2 16 504-519 23-39 (84)
58 1uuy_A CNX1, molybdopterin bio 21.0 1.6E+02 0.0056 25.5 6.1 40 80-119 48-88 (167)
59 1yht_A DSPB; beta barrel, hydr 20.9 61 0.0021 32.5 3.5 28 86-113 92-121 (367)
60 2is8_A Molybdopterin biosynthe 20.8 1.7E+02 0.0057 25.3 6.0 38 80-117 39-77 (164)
61 2lnd_A De novo designed protei 20.7 1.2E+02 0.0041 23.0 4.2 34 80-113 29-62 (112)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=3.4e-90 Score=743.07 Aligned_cols=506 Identities=53% Similarity=0.968 Sum_probs=433.6
Q ss_pred CcccHHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEE
Q 009115 28 THESFLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRV 107 (543)
Q Consensus 28 ~~~~~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~ 107 (543)
+.++|.+||+........+++.|++|+++.|++++.++.+|.||+......|.+||+|+|++||+++|++|+++++||.+
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 45789999998876667889999999999999998888899999999999999999999999999999999999999999
Q ss_pred eeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcC
Q 009115 108 RSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISG 187 (543)
Q Consensus 108 ~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~g 187 (543)
|||||++.|.+...+ .++++|||++||+|++|++.++|+||+|+++++|+++|.++|.++.+++|.|++|||||+++|
T Consensus 83 rggGh~~~g~~~~~~--~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 83 RSGGHDAEGMSYISQ--VPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp ESSCCCTTCTTTCCS--SSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHT
T ss_pred ECCCcCCCCCccCCC--CCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCC
Confidence 999999998774322 249999999999999999999999999999999999999998789999999999999999999
Q ss_pred CCCCCCccccCchhhheeeEEEEeeCCcEeeccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCch-H
Q 009115 188 GGWGILLRKYGLAADNIVDARMIDVQGRFLDRKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWD-Q 266 (543)
Q Consensus 188 gg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~-~ 266 (543)
||+|+++++||+++|+|+++|||++||++++.+.+|+|||||+||||+|+|||||+++||++|.|+.+..|.+.+.++ +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999844468999999999866899999999999999999888888877654 5
Q ss_pred HHHHHHHHHHHhhhcCCCCceEEEEEeecCCC---CCCCcceEEEEEEEEeCCccCcHhHHhhhccccCCccccccccch
Q 009115 267 IATKLVHRWQHVAHKLPEDLFIMVFLRSLSSG---TEGNRTMEAIFQSLFLGGVEKLLPLMQERFPELGLVKEDCNETSW 343 (543)
Q Consensus 267 ~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~---~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 343 (543)
++.+++.+||++.+++|+++++.+.+...++. ..+...+.+.+.++|+|+.+++.+.|.+.|++++....++.+++|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 57889999999999999999999888753221 112233467888999999999998898888888776677889999
Q ss_pred HHHHHHhhcCCCC-Cc---hhHhhhccCCcccccceeecccccCCCCHHHHHHHHHHHhccCccceeEEEEecCCccCCC
Q 009115 344 IQSIMIFNGFESG-ES---LDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYERLSKVEAEAAQLFFVPYGGKMSEI 419 (543)
Q Consensus 344 ~~~~~~~~~~~~~-~~---~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~p~~~~i~~~~~GGav~~v 419 (543)
++.+.+++++..+ .+ ++.+.++... ...+||.||+|+.+++++++++.+++.+.+.....+.+.++++||+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v 399 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKKEILLDRSAG-KKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEI 399 (518)
T ss_dssp HHHHHHTSSSCCC-----CGGGGGCTTCS-CCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTS
T ss_pred hhhhhhhhcCCccCCccchhhhhccCCcC-cccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCC
Confidence 9988887755432 22 4445555333 34567899999998999999999999887632225788999999999999
Q ss_pred CCCCCCCcccCCCeEEEEEEEeecCCCcchhHHHHHHHHHHHHhcccccCCCCCceeccccCCCcC-CCCCCCcchhhhh
Q 009115 420 SKSAIPFPHRAGNIYEIGHLVLWAEDGIDASQRHINWIRELYSYMTPYVSKNPRAAYINYRDLDIG-TNNEGYTSYKEAS 498 (543)
Q Consensus 420 ~~~ataf~~R~~~~~~v~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~g~YvNy~d~dl~-~~~~~~~~~~~~~ 498 (543)
+.++|||+||++.+|.+++.+.|.++ +.+++..+|++++++.|.|+.++.++++|+||.|.|++ .+..++++|+.++
T Consensus 400 ~~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~ 477 (518)
T 3vte_A 400 SESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQAR 477 (518)
T ss_dssp CTTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHH
T ss_pred CCCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhh
Confidence 99999999998558999999999765 45678899999999999999765567899999998876 3223456777888
Q ss_pred hhhhhhhhhhHHHHHHhhhccCCCCCccCCCCCCCCcccc
Q 009115 499 VWGKKYFNHNFDRLVHVKTSVDPDNFFRNEQSIPPLSSWK 538 (543)
Q Consensus 499 ~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~~~ 538 (543)
.|++.|||+||+||++||+||||+|||+++|||||+++|+
T Consensus 478 ~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~~~ 517 (518)
T 3vte_A 478 IWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPPHH 517 (518)
T ss_dssp HHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCTTC
T ss_pred hHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999998864
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3.1e-86 Score=710.82 Aligned_cols=488 Identities=44% Similarity=0.792 Sum_probs=420.1
Q ss_pred cHHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeC
Q 009115 31 SFLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSG 110 (543)
Q Consensus 31 ~~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~gg 110 (543)
+|.+||+...... ++.|++|+|+.|++++.++.+|.||+....+.|.+|++|+|++||+++|++|+++++||.+|||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4789999876432 7899999999999998788899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCC
Q 009115 111 GHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGW 190 (543)
Q Consensus 111 Gh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~ 190 (543)
|||+.|.+...+ +++++|||++||+|++|+++++|+||+|+++++|+++|.++|.++.+++|.|+++||||+++|||+
T Consensus 78 Gh~~~g~~~~~~--~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~ 155 (495)
T 3fw9_A 78 GHSYEGLSYTSD--TPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGF 155 (495)
T ss_dssp CCCTTCTTSCCS--SCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCC
T ss_pred CcCCCCccccCC--CCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCC
Confidence 999988876543 358999999999999999999999999999999999999997778999999999999999999999
Q ss_pred CCCccccCchhhheeeEEEEeeCCcEeeccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCch-HHHH
Q 009115 191 GILLRKYGLAADNIVDARMIDVQGRFLDRKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWD-QIAT 269 (543)
Q Consensus 191 G~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~-~~~~ 269 (543)
|+++++||+.+|+|++++||++||++++++.+++||||++|||++|+|||||+++||++|+|+.+..+.+.++++ +++.
T Consensus 156 G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~ 235 (495)
T 3fw9_A 156 GMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEAT 235 (495)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHH
T ss_pred cccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHH
Confidence 999999999999999999999999999855568999999999657899999999999999999888888777654 5578
Q ss_pred HHHHHHHHhhhcCCCCceEEEEEeecCCCCCCCcceEEEEEEEEeCCccCcHhHHhhhccccCCccccccccchHHHHHH
Q 009115 270 KLVHRWQHVAHKLPEDLFIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKLLPLMQERFPELGLVKEDCNETSWIQSIMI 349 (543)
Q Consensus 270 ~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (543)
+++..|+++++++|+++++.+..... .....+.+.++|+|+.+++.+.|.+.|+++++...++.+++|++.+.+
T Consensus 236 ~~l~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~ 309 (495)
T 3fw9_A 236 SLLHKWQFVAEELEEDFTLSVLGGAD------EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAY 309 (495)
T ss_dssp HHHHHHHHHHHHSCTTEEEEEEEEEE------TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHH
T ss_pred HHHHHHHHHHhcCChhHeEEEEEcCC------CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHH
Confidence 89999999999999999988775321 123457788999999999988888878888776677889999998877
Q ss_pred hhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHHHHHhccCccceeEEEEecCCccCCCCCCCCCCccc
Q 009115 350 FNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYERLSKVEAEAAQLFFVPYGGKMSEISKSAIPFPHR 429 (543)
Q Consensus 350 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~p~~~~i~~~~~GGav~~v~~~ataf~~R 429 (543)
++++.. ++.+.++.....+.+||.||.|+.+++++++++.+++.+.+.+ ...+.++++||++++++.++|||+||
T Consensus 310 ~~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~--~~~~~~~~~GGa~~~v~~~~TAf~hR 384 (495)
T 3fw9_A 310 LAGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEP--NGFIALNGFGGQMSKISSDFTPFPHR 384 (495)
T ss_dssp HTTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCT--TEEEEEEECCGGGGTSCTTTSSCCCC
T ss_pred Hhcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCC--CcEEEecccCCccccCCCCCCCcccc
Confidence 764332 2334343221013578899999999999999999999887653 56789999999999999999999999
Q ss_pred CCCeEEEEEEEeecCCCcchhHHHHHHHHHHHHhcccccCCCCCceeccccCCCcCCCCC-----CCcchhhhhhhhhhh
Q 009115 430 AGNIYEIGHLVLWAEDGIDASQRHINWIRELYSYMTPYVSKNPRAAYINYRDLDIGTNNE-----GYTSYKEASVWGKKY 504 (543)
Q Consensus 430 ~~~~~~v~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~g~YvNy~d~dl~~~~~-----~~~~~~~~~~~~~~Y 504 (543)
++.+|.+++.+.|.+++++.+++..+|++++++.|.|+.++.++++|+||.|.+++.+.. ++++|+.++.|++.|
T Consensus 385 ~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Y 464 (495)
T 3fw9_A 385 SGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESY 464 (495)
T ss_dssp TTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHH
T ss_pred CccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHH
Confidence 855899999999976433566788999999999999997655678999999988752111 124566677899999
Q ss_pred hhhhHHHHHHhhhccCCCCCccCCCCCCCC
Q 009115 505 FNHNFDRLVHVKTSVDPDNFFRNEQSIPPL 534 (543)
Q Consensus 505 yg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 534 (543)
||+||+||++||+||||+|+|+++|||||+
T Consensus 465 yg~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 465 FLSNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred hHhHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 999999999999999999999999999986
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=6.9e-82 Score=682.93 Aligned_cols=492 Identities=46% Similarity=0.878 Sum_probs=411.7
Q ss_pred ccCCcccHHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCe
Q 009115 25 AADTHESFLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQ 104 (543)
Q Consensus 25 ~~~~~~~~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~ 104 (543)
.++..+++.+||.... .+..|++|+++.|.+.+.++.+|.||+.....+|.+||+|+|++||+++|++|+++++|
T Consensus 4 ~~~~~~~f~~~L~~~~-----~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~ 78 (500)
T 3tsh_A 4 PPAAKEDFLGCLVKEI-----PPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVR 78 (500)
T ss_dssp -----CHHHHHHHHHS-----CGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCE
T ss_pred CcccHHHHHHHHHhhC-----CCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCc
Confidence 4677889999998754 35678999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCcccccc
Q 009115 105 IRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGH 184 (543)
Q Consensus 105 v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~ 184 (543)
|++|||||++.|.+.+....+++++|||++||+|++|++.++++||+|+++++|+++|.++|.++.+++|.|++||+||+
T Consensus 79 ~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~ 158 (500)
T 3tsh_A 79 IRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGN 158 (500)
T ss_dssp EEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHH
T ss_pred EEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCc
Confidence 99999999999877543222469999999999999999999999999999999999999999888899999999999999
Q ss_pred CcCCCCCCCccccCchhhheeeEEEEeeCCcEeeccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCc
Q 009115 185 ISGGGWGILLRKYGLAADNIVDARMIDVQGRFLDRKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPW 264 (543)
Q Consensus 185 ~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~ 264 (543)
++|||+|.++++||+++|+|+++|||++||++++++.+++||||++||||+|+|||||+++||++|+|+.+..+.+.+..
T Consensus 159 ~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~ 238 (500)
T 3tsh_A 159 FAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTV 238 (500)
T ss_dssp HHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEET
T ss_pred cccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCc
Confidence 99999999999999999999999999999999986567899999999887889999999999999999988877777766
Q ss_pred hHHHHHHHHHHHHhhhcCCCCceEEEEEeecCCCCCCCcceEEEEEEEEeCCccCcHhHHhhhccccCCccccccccchH
Q 009115 265 DQIATKLVHRWQHVAHKLPEDLFIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKLLPLMQERFPELGLVKEDCNETSWI 344 (543)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 344 (543)
.+.+.+++..|+.+.+.+|+++...+..... ...+.++|+|+.+++.+.+.+.++.++.....+..++|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (500)
T 3tsh_A 239 SEGAVDIINKWQVVAPQLPADLMIRIIAQGP----------KATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWI 308 (500)
T ss_dssp TTTHHHHHHHHHHHGGGSCTTEEEEEEESSS----------EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHH
T ss_pred HHHHHHHHHHHHHhhhccChhhEEEEEecCC----------CcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhh
Confidence 6667889999999999999998877665322 456678899999888888887777777766677788888
Q ss_pred HHHHHhhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHHHHHhccCccceeEEEEecCCccCCCCCCCC
Q 009115 345 QSIMIFNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYERLSKVEAEAAQLFFVPYGGKMSEISKSAI 424 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~p~~~~i~~~~~GGav~~v~~~at 424 (543)
+...+..........+.+..+... ...+.+.++.++.++++++.++.+++.+... +....+.++++||++++++.++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gga~~~~~~~at 386 (500)
T 3tsh_A 309 QSIPFVHLGHRDALEDDLLNRQNS-FKPFAEYKSDYVYQPFPKTVWEQILNTWLVK-PGAGIMIFDPYGATISATPESAT 386 (500)
T ss_dssp HHHHHHHHCCSSCHHHHHHCCCCC-CCCEEEEEEEEECSCCCHHHHHHHHHTGGGS-TTCCEEEEEECCHHHHHSCTTSS
T ss_pred ccchhhhhcccccccccccccccc-ccchhhhhhhhhcccCcHHHHHHHHHHhhcC-CCceEEEEcccCccccCCCCccC
Confidence 876554322222222333333322 3445566778888889988888888766543 22566778999999999999999
Q ss_pred CCcccCCCeEEEEEEEeecCCCcchhHHHHHHHHHHHHhcccccCCCCCceeccccCCCcCCCCC--CCcchhhhhhhhh
Q 009115 425 PFPHRAGNIYEIGHLVLWAEDGIDASQRHINWIRELYSYMTPYVSKNPRAAYINYRDLDIGTNNE--GYTSYKEASVWGK 502 (543)
Q Consensus 425 af~~R~~~~~~v~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~g~YvNy~d~dl~~~~~--~~~~~~~~~~~~~ 502 (543)
+|+||++.+|.+++...|.++ +.+++..+|++++++.++|+..+.+.++|+||+|.+++..+. ....|...+.|++
T Consensus 387 a~~~R~~~l~~i~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~ 464 (500)
T 3tsh_A 387 PFPHRKGVLFNIQYVNYWFAP--GAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQ 464 (500)
T ss_dssp SCCCCTTCCEEEEEEEEECST--TCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHH
T ss_pred cCcccCCcEEEEEEEEecCCc--chhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHH
Confidence 999999767899999999876 345778999999999999997766778999999998764221 1124555678999
Q ss_pred hhhhhhHHHHHHhhhccCCCCCccCCCCCCCCc
Q 009115 503 KYFNHNFDRLVHVKTSVDPDNFFRNEQSIPPLS 535 (543)
Q Consensus 503 ~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~ 535 (543)
.|||+||+||++||+||||+|+|+++|||||..
T Consensus 465 ~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 465 KYFKGNFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp HHHGGGHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred HhhhHHHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 999999999999999999999999999999975
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.5e-75 Score=626.76 Aligned_cols=456 Identities=24% Similarity=0.444 Sum_probs=373.8
Q ss_pred cHHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeC
Q 009115 31 SFLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSG 110 (543)
Q Consensus 31 ~~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~gg 110 (543)
+|.+||+.... .|+.|+++.|++++. +||.+....|.+|++|+|++||+++|++|+++++||.+|||
T Consensus 2 ~l~~cl~~~~~-------~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 2 AIEACLSAAGV-------PIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp HHHHHHHHTTC-------CBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHhCCC-------cEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 58899998653 479999999998743 57777778999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCeEEEEeccCccEE-EeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCC
Q 009115 111 GHDYEGLSFRTSYNSPFVIIDMINLSSIS-IDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGG 189 (543)
Q Consensus 111 Gh~~~g~~~~~~~~~~givIdl~~~~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg 189 (543)
|||+.+.+.... +++++|||++||+|. +|+++++|+||+|+++++|+++|.++| ++.++.|.|+++||||+++|||
T Consensus 69 Gh~~~g~~~~~~--~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg 145 (473)
T 3rja_A 69 GHSYASFGFGGE--NGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGG 145 (473)
T ss_dssp CCCTTCGGGTSS--SSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCC
T ss_pred CCCCCCCcccCC--CCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCC
Confidence 999986554322 348999999999996 999999999999999999999999997 4788999999999999999999
Q ss_pred CCCCccccCchhhheeeEEEEeeCCcEee-ccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCch-H-
Q 009115 190 WGILLRKYGLAADNIVDARMIDVQGRFLD-RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWD-Q- 266 (543)
Q Consensus 190 ~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~-~- 266 (543)
+|+.+++||+++|+|+++|||++||++++ ++.+++||||++||| +|+|||||+++||++|.|+.+..+.+.+++. .
T Consensus 146 ~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~ 224 (473)
T 3rja_A 146 FGFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGA-GSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKT 224 (473)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHH-GGGTCEEEEEEEECEECCSCEEEEEEECCCCSHH
T ss_pred CCcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCC-CCceEEEEEEEEEEEeCCCceEEEEEEecCccHH
Confidence 99999999999999999999999999998 777899999999999 5899999999999999998888888777764 3
Q ss_pred HHHHHHHHHHHhhh-cCCCCceEEEEEeecCCCCCCCcceEEEEEEEEeCCccCcHhHHhhhccccC-Ccccccc-ccch
Q 009115 267 IATKLVHRWQHVAH-KLPEDLFIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKLLPLMQERFPELG-LVKEDCN-ETSW 343 (543)
Q Consensus 267 ~~~~~~~~~~~~~~-~~p~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~ 343 (543)
++.+++++|+++.. ++|+++++.+.+. . . + .+.+.++|+|+.+++++++++++...+ +...++. +++|
T Consensus 225 ~~~~~~~~~~~~~~~~~p~~l~~~~~~~-~-~---~----~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~ 295 (473)
T 3rja_A 225 SALKGIEAVEDYARWVAPREVNFRIGDY-G-A---G----NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNW 295 (473)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEEES-S-S---S----CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECH
T ss_pred HHHHHHHHHHHHhhhCCChhHEEEEEEc-C-C---C----cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCH
Confidence 47789999999988 8999999888775 2 1 1 256788999999999888887654333 3455677 8999
Q ss_pred HHHHHHhhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHHHHHhccCc----cceeEEEEecCC---cc
Q 009115 344 IQSIMIFNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYERLSKVEA----EAAQLFFVPYGG---KM 416 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~p----~~~~i~~~~~GG---av 416 (543)
++.+.+++... +.+... .. ....++.||.++. ++++++++.+++.+.+..+ ..+.++++++|| ++
T Consensus 296 ~~~~~~~~~~~---~~~~~~---~~-~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai 367 (473)
T 3rja_A 296 IESVLSYSNFD---HVDFIT---PQ-PVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQV 367 (473)
T ss_dssp HHHHHHTSSSS---CCCCSS---CC-CCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGG
T ss_pred HHHHHhhhcCC---Cccccc---CC-CCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhh
Confidence 99876654211 111110 00 1234678888864 6999999999998865322 124578999998 67
Q ss_pred CCCCCCCCCCcccCCCeEEEEEEEeecC-CCcchhHHHHHHHHHHHHhcccccCCCCCceeccccCCCcCCCCCCCcchh
Q 009115 417 SEISKSAIPFPHRAGNIYEIGHLVLWAE-DGIDASQRHINWIRELYSYMTPYVSKNPRAAYINYRDLDIGTNNEGYTSYK 495 (543)
Q Consensus 417 ~~v~~~ataf~~R~~~~~~v~~~~~W~d-~~~~~~~~~~~wi~~~~~~l~p~~~~~~~g~YvNy~d~dl~~~~~~~~~~~ 495 (543)
++++.++|||+||+ .+|.+++.+.|.+ + +.+++..+|++++++.+.+.....+.++|+||+|.+++
T Consensus 368 ~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~---------- 434 (473)
T 3rja_A 368 TKVTNAETAYPHRD-KLWLIQFYDRYDNNQ--TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD---------- 434 (473)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEECTTS--CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC----------
T ss_pred cCCCCCCCccccCC-ccEEEEEEEEeCCCC--ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc----------
Confidence 88899999999999 6899999999953 2 22344567777766666544322245899999998863
Q ss_pred hhhhhhhhhhhhhHHHHHHhhhccCCCCCccCCCCCCCC
Q 009115 496 EASVWGKKYFNHNFDRLVHVKTSVDPDNFFRNEQSIPPL 534 (543)
Q Consensus 496 ~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 534 (543)
.++|++.|||+||+||++||+||||+|+|+++|||+|+
T Consensus 435 -~~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 435 -RDYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp -HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred -chhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 13799999999999999999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=5.8e-73 Score=609.33 Aligned_cols=455 Identities=22% Similarity=0.359 Sum_probs=358.7
Q ss_pred CcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCC
Q 009115 44 TSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSY 123 (543)
Q Consensus 44 ~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~ 123 (543)
.++.+.|+.|+|+.|+++++ .||.+....|.+||+|+|++||+++|++|+++++||++|||||++.+.+....
T Consensus 6 ~s~~~~~~~p~~~~y~~~~~------~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~- 78 (501)
T 3pop_A 6 ASVPPFTVGREDPRYIELSH------SDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR- 78 (501)
T ss_dssp ---CCEEEETTSTTHHHHTC------CSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-
T ss_pred ccCCCceECCCCcchHHHHH------HHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-
Confidence 46788899999999998863 35555568999999999999999999999999999999999999998776542
Q ss_pred CCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHH-hCCCCeecCCCCCCccccccCcCCCCCCCccccCchhh
Q 009115 124 NSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAE-KSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGLAAD 202 (543)
Q Consensus 124 ~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d 202 (543)
++++|||++||+|++|++.++|+||+|+++++|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|
T Consensus 79 --~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D 154 (501)
T 3pop_A 79 --RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVD 154 (501)
T ss_dssp --CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGG
T ss_pred --CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHH
Confidence 489999999999999999999999999999999999974 54 6789999999999999999999999999999999
Q ss_pred heeeEEEEe--eCCc--Eee-c---cCCCccchhheeccCCCCeEEEEEEEEEE----------EecC-CeEEEEEEEcC
Q 009115 203 NIVDARMID--VQGR--FLD-R---KSMGEDLFWAIRGGGGASFGVIVAWKIKL----------VDVP-STVTVFTVRRP 263 (543)
Q Consensus 203 ~v~~~~vV~--~~G~--~~~-~---~~~~~dl~~a~rG~g~g~~Givt~~~lk~----------~p~~-~~~~~~~~~~~ 263 (543)
+|+++|||+ +||+ +++ + +.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+
T Consensus 155 ~v~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~ 234 (501)
T 3pop_A 155 HLHAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFP 234 (501)
T ss_dssp GEEEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEE
T ss_pred hEEEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEc
Confidence 999999999 8899 454 2 35789999999998678999999999999 7654 45666777776
Q ss_pred ch----HHHHHHHHHHHHhhh--cCCCCc--eEEEEEeecCCCCCCCcceEEEEEEEEeCCccCcHhHHhhhccc-----
Q 009115 264 WD----QIATKLVHRWQHVAH--KLPEDL--FIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKLLPLMQERFPE----- 330 (543)
Q Consensus 264 ~~----~~~~~~~~~~~~~~~--~~p~~l--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~----- 330 (543)
+. +.+.++++.|+++.. ..|+++ .+...+...+. ..+ .+.+..+|.|+.+++++++++++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~ 309 (501)
T 3pop_A 235 WAMIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV-SSG----VLQLMVQQDADVDPEGEILARFVASLTEGT 309 (501)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG-GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTS
T ss_pred hhhcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC-CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhcc
Confidence 43 224577888888775 456543 23333322211 011 3456677899988877777765432
Q ss_pred -cCCccccccccchHHHHHHhhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHHHHHhccCc-cceeEE
Q 009115 331 -LGLVKEDCNETSWIQSIMIFNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYERLSKVEA-EAAQLF 408 (543)
Q Consensus 331 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~p-~~~~i~ 408 (543)
+.+... +.+++|++...+.. .+.+.+ . ...+++.||.|+.++++++.++.+++.+....+ ..+.+.
T Consensus 310 g~~p~~~-~~~~~~~~~~~~~~-~~~~~~--~--------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~ 377 (501)
T 3pop_A 310 GVVGIPR-GGVMSWLTGTRYMS-QADCGD--V--------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVM 377 (501)
T ss_dssp SCCCEEE-EEEEEHHHHHHHTC-BCSCGG--G--------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEE
T ss_pred CCCccce-eEEeCHHHHHhhhc-CCCCCc--c--------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEE
Confidence 223333 77889998765432 111100 0 123467899999888999999999998876322 257889
Q ss_pred EEecCCccCCCCCCCCCCcccCCCeEEEEEEEeecCCCcchhHHHHHHHHHHHHhcccccCC------CCCceeccccCC
Q 009115 409 FVPYGGKMSEISKSAIPFPHRAGNIYEIGHLVLWAEDGIDASQRHINWIRELYSYMTPYVSK------NPRAAYINYRDL 482 (543)
Q Consensus 409 ~~~~GGav~~v~~~ataf~~R~~~~~~v~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~------~~~g~YvNy~d~ 482 (543)
++++||++++++.++|||+||+ .+|.+++...|.++ +.++++.+|++++++.+.+...+ .+.++|+||+|.
T Consensus 378 ~~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~ 454 (501)
T 3pop_A 378 FNSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDA 454 (501)
T ss_dssp EEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCG
T ss_pred EEecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCc
Confidence 9999999999999999999999 68999999999765 45678899999999999765421 246899999999
Q ss_pred CcCCCCCCCcchhhhhhhhhhhhhhhHHHHHHhhhccCCCCCccCCCCCCC
Q 009115 483 DIGTNNEGYTSYKEASVWGKKYFNHNFDRLVHVKTSVDPDNFFRNEQSIPP 533 (543)
Q Consensus 483 dl~~~~~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~ 533 (543)
|++..+ .+ +++..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 455 dl~~~~-~~---~~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 455 DLLDPA-RN---RSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp GGGCTT-TC---CSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccccc-cc---cccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 875311 01 123359999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=8e-69 Score=581.47 Aligned_cols=460 Identities=26% Similarity=0.448 Sum_probs=349.4
Q ss_pred HHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCC
Q 009115 32 FLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGG 111 (543)
Q Consensus 32 ~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggG 111 (543)
-.+||... ...|++|+|+.|++++ ...+|.||. ..|.+||+|+|++||+++|++|+++++||.+||||
T Consensus 23 ~~~~l~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 90 (523)
T 2wdx_A 23 GERCLPPA-------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGG 90 (523)
T ss_dssp ---CCCCC-------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred chhhcccC-------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 34888764 4678999999999886 233566664 68999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHH-hCCCCeecCCCCCCccccccCcCCCC
Q 009115 112 HDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAE-KSPNLAFPAGSCPSVGTGGHISGGGW 190 (543)
Q Consensus 112 h~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~ 190 (543)
|++.+.+.... ++++|||++||+|++|++.++|+||+|+++.+|+++|.+ +| +.++.|.|++|||||+++|||+
T Consensus 91 h~~~g~~~~~~---~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 165 (523)
T 2wdx_A 91 HCFEDFVDNPD---VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGY 165 (523)
T ss_dssp CCSSSSSSSTT---CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCC
T ss_pred CCCCCCccCCC---CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCC
Confidence 99998776532 389999999999999999999999999999999999985 75 6788999999999999999999
Q ss_pred CCCccccCchhhheeeEEEEeeC--CcEee---ccC-CCcc--chhheeccCCCCeEEEEEEEEEE-----------Eec
Q 009115 191 GILLRKYGLAADNIVDARMIDVQ--GRFLD---RKS-MGED--LFWAIRGGGGASFGVIVAWKIKL-----------VDV 251 (543)
Q Consensus 191 G~~~~~~G~~~d~v~~~~vV~~~--G~~~~---~~~-~~~d--l~~a~rG~g~g~~Givt~~~lk~-----------~p~ 251 (543)
|+++++||+++|+|+++|||++| |++++ +.. +++| ||||+||||+|+|||||+++||+ +|.
T Consensus 166 g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~ 245 (523)
T 2wdx_A 166 GPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPK 245 (523)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCC
T ss_pred CcccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCC
Confidence 99999999999999999999965 99753 332 5566 99999987678999999999999 998
Q ss_pred CC-eEEEEEEEcCch----HHHHHHHHHHHHhhhc--CCCCc--eEEEEEeecCCCCCCCcceEEEEEEEEeCCccCcHh
Q 009115 252 PS-TVTVFTVRRPWD----QIATKLVHRWQHVAHK--LPEDL--FIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKLLP 322 (543)
Q Consensus 252 ~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~l--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~ 322 (543)
|+ .+..+.+.|+.+ +...++++.|+++... .|++. .+...+...+. ..+...+.+.+..+|.|+.++..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~ 324 (523)
T 2wdx_A 246 PPATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE-VPGMGESGFMMPIQVDATRPDARR 324 (523)
T ss_dssp CCSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC-CTTCTTCSEEEEEEEETTSTTHHH
T ss_pred CcccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC-CCCCcceeEEEEEEEeCCHHHHHH
Confidence 86 466777777653 2246788888888754 56652 23333322211 112111235567788998877766
Q ss_pred HHhhhccc----cC-CccccccccchHHHHHHhhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHHHHH
Q 009115 323 LMQERFPE----LG-LVKEDCNETSWIQSIMIFNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYERL 397 (543)
Q Consensus 323 ~l~~~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~ 397 (543)
.+.+++.. ++ +....+..++|.+....+. . ...+++.++.++.+.++.+.+..+++.+
T Consensus 325 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (523)
T 2wdx_A 325 LLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRG-------------G----RGPASKTKAGYLRKRLTDRQIQAVYENM 387 (523)
T ss_dssp HHHHHHHHHHTTCTTCBCCCCEEEETTSSCCCCC-------------S----SCCEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCccccceeccHHHHHHhhc-------------C----CCCceeeecccccCCCCHHHHHHHHHHH
Confidence 66654322 22 2223344556554211000 0 0113456777877678989999999988
Q ss_pred hccCc-cceeEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEEeecCCCcchhHHHHHHHHHHHHhcc------cccCC
Q 009115 398 SKVEA-EAAQLFFVPYGGKMSEISKSAIPFPHRAGNIYEIGHLVLWAEDGIDASQRHINWIRELYSYMT------PYVSK 470 (543)
Q Consensus 398 ~~~~p-~~~~i~~~~~GGav~~v~~~ataf~~R~~~~~~v~~~~~W~d~~~~~~~~~~~wi~~~~~~l~------p~~~~ 470 (543)
....+ ..+.+.++++||++++++.++|+|+||+ .+|++++...|.++ +.++...+|++++++.+. |+.+.
T Consensus 388 ~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~ 464 (523)
T 2wdx_A 388 THMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPND 464 (523)
T ss_dssp TCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCS
T ss_pred HhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCC
Confidence 75322 2567788999999999999999999999 68999999999865 456788999999999987 32111
Q ss_pred CCCceeccccCCCcCCCCCCCcchhhhhhhhhhhhhhhHHHHHHhhhccCCCCCccCCCCCCC
Q 009115 471 NPRAAYINYRDLDIGTNNEGYTSYKEASVWGKKYFNHNFDRLVHVKTSVDPDNFFRNEQSIPP 533 (543)
Q Consensus 471 ~~~g~YvNy~d~dl~~~~~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~ 533 (543)
...++|+||+|.+++..+ .++++ ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 465 ~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 465 VSDGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp SBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCCcceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 135799999998864210 01111 148999999999999999999999999999999987
No 7
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=8.1e-68 Score=574.03 Aligned_cols=469 Identities=26% Similarity=0.425 Sum_probs=346.2
Q ss_pred cHHHhhcccCCC-CCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEee
Q 009115 31 SFLQCLSLHSEN-STSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRS 109 (543)
Q Consensus 31 ~~~~c~~~~~~~-~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~g 109 (543)
+++.|-...... ..+....|+.|+++.|+++++. +|.|| ...|.+||+|+|++||+++|++|+++++||++||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~Y~~~~~~--~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~g 89 (530)
T 2y3s_A 16 DIPTTENLYFQGSEFMKHIDSVAPGDIRYEDLRRG--ENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRS 89 (530)
T ss_dssp ------------------CCEECTTSTTHHHHTCC--SCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred cchhHHHHHhhhhhccCCceEECCCCccHHHHHhH--hhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 455664443211 1122457899999999988643 35555 5689999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHH-hCCCCeecCCCCCCccccccCcCC
Q 009115 110 GGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAE-KSPNLAFPAGSCPSVGTGGHISGG 188 (543)
Q Consensus 110 gGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~gg 188 (543)
|||++.+.+.... ++++|||++||+|++|++.++|+||+|+++.+|+++|.+ +| +.++.|.|++|||||+++||
T Consensus 90 gGh~~~g~~~~~~---~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gG 164 (530)
T 2y3s_A 90 GGHCYEDFVANSD---VRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGG 164 (530)
T ss_dssp SCCCSSSTTTCTT---CCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTT
T ss_pred CCCCCCCCcccCC---CeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCC
Confidence 9999998765432 389999999999999999999999999999999999985 75 67889999999999999999
Q ss_pred CCCCCccccCchhhheeeEEEEee--CCcEe--e-ccC-CCcc--chhheeccCCCCeEEEEEEEEEE------------
Q 009115 189 GWGILLRKYGLAADNIVDARMIDV--QGRFL--D-RKS-MGED--LFWAIRGGGGASFGVIVAWKIKL------------ 248 (543)
Q Consensus 189 g~G~~~~~~G~~~d~v~~~~vV~~--~G~~~--~-~~~-~~~d--l~~a~rG~g~g~~Givt~~~lk~------------ 248 (543)
|+|+++++||+++|+|+++|||++ +|+++ + +.. +++| ||||+||||+|+|||||+++||+
T Consensus 165 g~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~ 244 (530)
T 2y3s_A 165 GYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRL 244 (530)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGS
T ss_pred CCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccc
Confidence 999999999999999999999995 59974 3 333 5565 99999998678999999999999
Q ss_pred EecCC-eEEEEEEEcCch----HHHHHHHHHHHHhhhc--CCCCc--eEEEEEeecCCCCCCCcceEEEEEEEEeCCccC
Q 009115 249 VDVPS-TVTVFTVRRPWD----QIATKLVHRWQHVAHK--LPEDL--FIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEK 319 (543)
Q Consensus 249 ~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~l--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ 319 (543)
+|.|+ .+..+.+.|+.+ +...++++.|+++... .|++. .+...+...+. ... .+.+...|.|+.++
T Consensus 245 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~g~~~~ 319 (530)
T 2y3s_A 245 LPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS---QSG--ALAMTTQLDATGPD 319 (530)
T ss_dssp SCCCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG---GGS--EEEEEEEEECCSTT
T ss_pred cCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC---CCC--cEEEEEEEeCCHHH
Confidence 99875 455666666542 2345788888887654 45542 23333322211 111 34556678898877
Q ss_pred cHhHHhhhccc----cC-CccccccccchHHHHHHhhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHH
Q 009115 320 LLPLMQERFPE----LG-LVKEDCNETSWIQSIMIFNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIY 394 (543)
Q Consensus 320 ~~~~l~~~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~ 394 (543)
..+++++++.. ++ +....+..++|.+.......... ... ..+++.++.++.+.++++.++.++
T Consensus 320 ~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~--~~r~~~~s~~~~~~~~~~~i~~~~ 387 (530)
T 2y3s_A 320 AEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGD----------GDM--TGRAKIKAAYARRSFDDRQIGTLY 387 (530)
T ss_dssp HHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHCC----------CCC--CSEEEEEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCCC----------Ccc--cccceeeccccccCCCHHHHHHHH
Confidence 76666653321 23 23344566788874332211000 000 123566788887778999999999
Q ss_pred HHHhccC-c-cceeEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEEeecCCCcchhHHHHHHHHHHHHhcccccCC--
Q 009115 395 ERLSKVE-A-EAAQLFFVPYGGKMSEISKSAIPFPHRAGNIYEIGHLVLWAEDGIDASQRHINWIRELYSYMTPYVSK-- 470 (543)
Q Consensus 395 ~~~~~~~-p-~~~~i~~~~~GGav~~v~~~ataf~~R~~~~~~v~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~-- 470 (543)
+.+.... + ..+.+.++++||++++++.++|+|+||+ .+|.+++...|.++ +.++...+|++++++.+.+...+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~l~~~~~g~p 464 (530)
T 2y3s_A 388 TRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDP--AQDPVHVRWIRELYRDVYADTGGVP 464 (530)
T ss_dssp HHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCT--TCHHHHHHHHHHHHHHHTGGGTTSC
T ss_pred HHHHhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCC--cchHHHHHHHHHHHHHHHhhhcCCC
Confidence 9887632 1 2467889999999999999999999999 68999999999875 34577899999999998733211
Q ss_pred ----CCCceeccccCCCcCCCCCCCcchhhhhhhhhhhhhhhHHHHHHhhhccCCCCCccCCCCCCCC
Q 009115 471 ----NPRAAYINYRDLDIGTNNEGYTSYKEASVWGKKYFNHNFDRLVHVKTSVDPDNFFRNEQSIPPL 534 (543)
Q Consensus 471 ----~~~g~YvNy~d~dl~~~~~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 534 (543)
...++|+||+|.+++.++ .++++ ..|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 465 ~~~~~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 465 VPGGAADGAYVNYPDVDLADEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp CTTTTBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cccCCCCceEeCCcCccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 135799999998864211 01111 2499999999999999999999999999999999986
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=4.4e-68 Score=573.92 Aligned_cols=464 Identities=22% Similarity=0.419 Sum_probs=360.9
Q ss_pred cCCcccHHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeE
Q 009115 26 ADTHESFLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQI 105 (543)
Q Consensus 26 ~~~~~~~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v 105 (543)
....+.|+.|++... ..++.|+++.|+... .+|+.+....|.+||+|+|++||+++|++|+++++||
T Consensus 3 ~~~~~~l~~~l~~~~-------~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 69 (503)
T 1zr6_A 3 EAEFNSINACLAAAD-------VEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQI 69 (503)
T ss_dssp CCTTCHHHHHHHHTT-------CEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCE
T ss_pred hHHHHHHHHhhCcCC-------ceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeE
Confidence 345578999998643 246889999998763 3577767789999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccC
Q 009115 106 RVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHI 185 (543)
Q Consensus 106 ~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~ 185 (543)
.+|||||++.+.+.+.. +++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.++.|.|++|||||++
T Consensus 70 ~v~ggGh~~~~~~~~~~--~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~ 145 (503)
T 1zr6_A 70 SAKGGGHSYGSYGFGGE--DGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHV 145 (503)
T ss_dssp EEESSCCCTTCTTTTSS--SSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHH
T ss_pred EEECCCcCCCCCcccCC--CCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhh
Confidence 99999999988665411 24899999999999999 888999999999999999998875 588899999999999999
Q ss_pred cCCCCCCCccccCchhhheeeEEEEeeCCcEee-ccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCc
Q 009115 186 SGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPW 264 (543)
Q Consensus 186 ~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~ 264 (543)
+|||+|+++++||+++|+|+++|||++||++++ ++.+|+||||++|||+ |+|||||+++||++|.|+....+.+.+++
T Consensus 146 ~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~ 224 (503)
T 1zr6_A 146 LGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTW 224 (503)
T ss_dssp HHCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECC
T ss_pred cCCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeC
Confidence 999999999999999999999999999999999 7778999999999995 69999999999999999876666666654
Q ss_pred h-HHHHHHHHHHHHhhhc-CCCCceEEEEEeecCCCCCCCcceEEEEEEEEeCCccCcHhHHhhhccccCC--ccccccc
Q 009115 265 D-QIATKLVHRWQHVAHK-LPEDLFIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKLLPLMQERFPELGL--VKEDCNE 340 (543)
Q Consensus 265 ~-~~~~~~~~~~~~~~~~-~p~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~ 340 (543)
. +.+.++++.|+++... +|++++..+.+... .+.+.++|+|+.+++.+.+++++..++. ....+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~ 294 (503)
T 1zr6_A 225 NRKQHVAGLKALQDWAQNTMPRELSMRLEINAN----------ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVE 294 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCTTBCCEEEEETT----------EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhhcCChhHEEEEEEeCC----------eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceee
Confidence 3 3467888999998876 89988877766431 4566788999988887777765443433 1334556
Q ss_pred cchHHHHHHhhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHHHHHh-ccCc---cceeEEEEecCC--
Q 009115 341 TSWIQSIMIFNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYERLS-KVEA---EAAQLFFVPYGG-- 414 (543)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~-~~~p---~~~~i~~~~~GG-- 414 (543)
.+|.+....+.+ +..... ..... .+..++.++.++++ ++.+.++.+++.+. ...+ ..+.+.++++||
T Consensus 295 ~~~~~~~~~~~~---~~~~~~--~~p~g-~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~ 367 (503)
T 1zr6_A 295 TDWYGQINTYLY---GADLNI--TYNYD-VHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKN 367 (503)
T ss_dssp ECHHHHHTTSCT---TCCSSC--SSCCC-CCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTT
T ss_pred CCHHHHHHHHcC---CCcccc--cCCCC-ccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCch
Confidence 778864432211 000000 00000 12346678888877 88999999999887 5321 124578899999
Q ss_pred -ccCCCCCCCCCCcccCCCeEEEEEEEee-----cCCCcchhHHHHHHHHHHHHhcccccCCCCCceeccccCCCcCCCC
Q 009115 415 -KMSEISKSAIPFPHRAGNIYEIGHLVLW-----AEDGIDASQRHINWIRELYSYMTPYVSKNPRAAYINYRDLDIGTNN 488 (543)
Q Consensus 415 -av~~v~~~ataf~~R~~~~~~v~~~~~W-----~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~g~YvNy~d~dl~~~~ 488 (543)
++++++.++++|+||+ .+|.+++...| .++ +.++...+|++++++.+.........++|+||+|.+++
T Consensus 368 ~av~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~--- 441 (503)
T 1zr6_A 368 SALAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS--PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT--- 441 (503)
T ss_dssp CSGGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT--TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC---
T ss_pred hhhcCCCcccCCccccc-ceeEEEEEeeeccccCCCc--cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc---
Confidence 8888888999999998 68888876776 222 22334456776666655543211123799999998742
Q ss_pred CCCcchhhhhhhhhhhhhhhHHHHHHhhhccCCCCCccCCCCCCCCccccc
Q 009115 489 EGYTSYKEASVWGKKYFNHNFDRLVHVKTSVDPDNFFRNEQSIPPLSSWKK 539 (543)
Q Consensus 489 ~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~~~~ 539 (543)
...|++.|||+||+||++||+||||+|+|+++|+|+|. .|..
T Consensus 442 --------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~-~w~~ 483 (503)
T 1zr6_A 442 --------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPI-AYLE 483 (503)
T ss_dssp --------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC-CC--
T ss_pred --------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCch-hhhh
Confidence 13799999999999999999999999999999999885 5654
No 9
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=3.2e-67 Score=569.14 Aligned_cols=462 Identities=24% Similarity=0.420 Sum_probs=345.4
Q ss_pred ccHHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEee
Q 009115 30 ESFLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRS 109 (543)
Q Consensus 30 ~~~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~g 109 (543)
.+...|+... ...|++|+|+.|++++ ...+|.|| ...|.+||+|+|++||+++|++|+++++||.+||
T Consensus 19 ~~~~~~~~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrg 86 (521)
T 2ipi_A 19 FDGGACGART-------ALVKVDRVDRRYQDLV-TRGFNGRF----RGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRS 86 (521)
T ss_dssp -----------------CCCEEESSSTTHHHHH-TCCSCTTC----CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred ccccccccCC-------CCeEECCCCcchHHHH-hccccccc----cCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 3555777653 3568999999999886 22346666 4689999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHH-HhCCCCeecCCCCCCccccccCcCC
Q 009115 110 GGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIA-EKSPNLAFPAGSCPSVGTGGHISGG 188 (543)
Q Consensus 110 gGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~g~~~~vgigG~~~gg 188 (543)
|||++.+.+.... ++++|||++||+|++|++.++|+||+|+++++|+++|. ++| +.++.|.|++|||||+++||
T Consensus 87 gGh~~~g~~~~~~---~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gG 161 (521)
T 2ipi_A 87 GGHCFEGFVDDPA---VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGG 161 (521)
T ss_dssp SCCCTTCGGGCTT---CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTT
T ss_pred CCcCCCCCcccCC---CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCC
Confidence 9999998765432 38999999999999999999999999999999999997 675 67789999999999999999
Q ss_pred CCCCCccccCchhhheeeEEEEeeC--CcEee---ccC-CCcc--chhheeccCCCCeEEEEEEEEEE-----------E
Q 009115 189 GWGILLRKYGLAADNIVDARMIDVQ--GRFLD---RKS-MGED--LFWAIRGGGGASFGVIVAWKIKL-----------V 249 (543)
Q Consensus 189 g~G~~~~~~G~~~d~v~~~~vV~~~--G~~~~---~~~-~~~d--l~~a~rG~g~g~~Givt~~~lk~-----------~ 249 (543)
|+|+++++||+++|+|+++|||++| |+++. +.. +++| ||||+||||+|+|||||+++||+ +
T Consensus 162 g~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~ 241 (521)
T 2ipi_A 162 GYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLL 241 (521)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSS
T ss_pred CCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCccccc
Confidence 9999999999999999999999987 98743 332 4555 99999997668999999999999 9
Q ss_pred ecCC-eEEEEEEEcCch----HHHHHHHHHHHHhhhc--CCCCc--eEEEEEeecCCCCCCCcceEEEEEEEEeCCccCc
Q 009115 250 DVPS-TVTVFTVRRPWD----QIATKLVHRWQHVAHK--LPEDL--FIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKL 320 (543)
Q Consensus 250 p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~l--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~ 320 (543)
|.|+ .+..+.+.|+.+ +...++++.|+++... .|++. .+...+...+. ... .+.+...|.|+.++.
T Consensus 242 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~---~~~--~~~~~~~~~g~~~~~ 316 (521)
T 2ipi_A 242 PKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR---AAG--QILLDIQIDGGLDGA 316 (521)
T ss_dssp CBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT---TSC--EEEEEEEEETTSTTH
T ss_pred CCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccC---CCC--ceEEEEEeccCHHHH
Confidence 9876 355556666432 2245788888887754 45542 22222222211 111 344566788988776
Q ss_pred HhHHhhhccc----cC-CccccccccchHHHHHHhhcCCCCCchhHhhhccCCcccccceeecccccCCCCHHHHHHHHH
Q 009115 321 LPLMQERFPE----LG-LVKEDCNETSWIQSIMIFNGFESGESLDILLQRTNYSDRRAFKAKSDYVREPMPGIALEGIYE 395 (543)
Q Consensus 321 ~~~l~~~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~ 395 (543)
.+++++++.. ++ +....+..++|.+........ . . ...+++.++.++.+.++.+.+..+++
T Consensus 317 ~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~----~---------~-~~~~~~~~s~~~~~~~~~~~i~~~~~ 382 (521)
T 2ipi_A 317 EALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFD----T---------G-GFDRTKSKGAYLRKPWTAAQAATLYR 382 (521)
T ss_dssp HHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCC----C---------T-TCCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCC----C---------C-CCccceeeccccccCCCHHHHHHHHH
Confidence 6666654322 22 223445667888854322110 0 0 00234557777777789999999999
Q ss_pred HHhccCccceeEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEEeecCCCcchhHHHHHHHHHHHHhcccccCC-----
Q 009115 396 RLSKVEAEAAQLFFVPYGGKMSEISKSAIPFPHRAGNIYEIGHLVLWAEDGIDASQRHINWIRELYSYMTPYVSK----- 470 (543)
Q Consensus 396 ~~~~~~p~~~~i~~~~~GGav~~v~~~ataf~~R~~~~~~v~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~----- 470 (543)
.+.+.....+.+.++++||++++++.++|+|+||+ .++.+++...|.++ +.++...+|++++++.+.....+
T Consensus 383 ~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~~ 459 (521)
T 2ipi_A 383 HLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVPD 459 (521)
T ss_dssp HHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCSS
T ss_pred HHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 88764212567889999999999998999999999 68999999999765 45677899999999999732211
Q ss_pred -CCCceeccccCCCcCCCCCCCcchhhhhhhhhhhhhhhHHHHHHhhhccCCCCCccCCCCCCCC
Q 009115 471 -NPRAAYINYRDLDIGTNNEGYTSYKEASVWGKKYFNHNFDRLVHVKTSVDPDNFFRNEQSIPPL 534 (543)
Q Consensus 471 -~~~g~YvNy~d~dl~~~~~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 534 (543)
...++|+||+|.+++..+ ..+ ....|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 460 ~~~~g~Y~Ny~d~~~~~~~-~~~---~~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 460 DRTEGTFINYPDVDLVDER-WNT---SGVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSBCCCCTTSCCGGGGCTT-TSC---CSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CCCCceEeCCCCccccccc-ccc---chhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 135799999998864210 000 012499999999999999999999999999999999985
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=8.2e-65 Score=543.73 Aligned_cols=439 Identities=21% Similarity=0.310 Sum_probs=339.5
Q ss_pred ccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCC
Q 009115 46 ISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNS 125 (543)
Q Consensus 46 ~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~ 125 (543)
+.+.|+.|+++.|+..+. +|+......|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+...+
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~--- 82 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDG--- 82 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSS---
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCC---
Confidence 467899999999998643 58887788999999999999999999999999999999999999998775444
Q ss_pred CeEEEEeccCccEEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCchhhhee
Q 009115 126 PFVIIDMINLSSISIDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGLAADNIV 205 (543)
Q Consensus 126 ~givIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~ 205 (543)
+++|||++||+|++|+++.+|+||||+++.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+++|+|+
T Consensus 83 -gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~ 159 (459)
T 2bvf_A 83 -GIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNIL 159 (459)
T ss_dssp -SEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEE
T ss_pred -eEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEE
Confidence 8999999999999999999999999999999999999985 7888999999999999999999999999999999999
Q ss_pred eEEEEeeCCcEee-ccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCchHHHH--HHHHHHHHhhhcC
Q 009115 206 DARMIDVQGRFLD-RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWDQIAT--KLVHRWQHVAHKL 282 (543)
Q Consensus 206 ~~~vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 282 (543)
++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+.+..+.+.|+..+ +. ++++.|+++...+
T Consensus 160 ~~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (459)
T 2bvf_A 160 GATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEM 237 (459)
T ss_dssp EEEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhC
Confidence 9999999999999 7778999999999984 8999999999999999766666666776533 44 7888898888777
Q ss_pred CCCceEEEEEeecCCCCCCCcceEEEEEEEEeCCccCcHhHHhhhccccC-CccccccccchHHHHHHhhcCCCCCchhH
Q 009115 283 PEDLFIMVFLRSLSSGTEGNRTMEAIFQSLFLGGVEKLLPLMQERFPELG-LVKEDCNETSWIQSIMIFNGFESGESLDI 361 (543)
Q Consensus 283 p~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (543)
|+.+...+ ..... ..+. ..+.+...|.|+.++..+.+.++ ..++ +....+...+|.+...... .
T Consensus 238 ~~~~~~~~-~~~~~--~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~ 302 (459)
T 2bvf_A 238 ADHIYPSV-FVGVD--ENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNA---------E 302 (459)
T ss_dssp TTTCCCEE-EEEEC--TTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHH---------H
T ss_pred cHhhcccc-ccCcc--cCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccc---------c
Confidence 87774333 11110 1122 24556678889887766666653 3443 2334556678877433211 0
Q ss_pred hhhccCCccccccee-ecccccCCCCHHHHHHHHHHHhccCccceeEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEE
Q 009115 362 LLQRTNYSDRRAFKA-KSDYVREPMPGIALEGIYERLSKVEAEAAQLFFVPYGGKMSEISKSAIPFPHRAGNIYEIGHLV 440 (543)
Q Consensus 362 ~~~r~~~~~~~~~~~-~s~~~~~~l~~~~i~~~~~~~~~~~p~~~~i~~~~~GGav~~v~~~ataf~~R~~~~~~v~~~~ 440 (543)
.... +. ....+.. ++.++++.++.+.++.+++.+.+.......+.++.+||++.+ .+.+||+||+ ..| +.+..
T Consensus 303 ~~~~-~~-~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~ 376 (459)
T 2bvf_A 303 VGSF-ED-GMSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALA 376 (459)
T ss_dssp HSCC-CC-SCEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEE
T ss_pred cccC-CC-CCcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEEE
Confidence 0000 00 1122332 566665345566666666665443201112344455888776 5679999999 577 88889
Q ss_pred eecCCCcchhHHHHHHHHHHHHhcccccCCCCCceeccccCCCcCCCCCCCcchhhhhhhhhhhhhhh-HHHHHHhhhcc
Q 009115 441 LWAEDGIDASQRHINWIRELYSYMTPYVSKNPRAAYINYRDLDIGTNNEGYTSYKEASVWGKKYFNHN-FDRLVHVKTSV 519 (543)
Q Consensus 441 ~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~g~YvNy~d~dl~~~~~~~~~~~~~~~~~~~Yyg~n-~~RL~~IK~ky 519 (543)
.|.++. ..++...+|++++++.+.|+......|+|+||+|.+. ..|.+.|||+| |+||++||+||
T Consensus 377 ~w~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~ky 442 (459)
T 2bvf_A 377 EWSGAA-PGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREY 442 (459)
T ss_dssp EECTTS-TTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EeCCCc-cchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHh
Confidence 997653 1345678999999999999842112478999999862 27899999987 99999999999
Q ss_pred CCCCCccCCCCCCC
Q 009115 520 DPDNFFRNEQSIPP 533 (543)
Q Consensus 520 DP~nvF~~~qsI~~ 533 (543)
||+|+|+++|+|+|
T Consensus 443 DP~~vF~~~~~I~p 456 (459)
T 2bvf_A 443 DPENRFRHNYNIDP 456 (459)
T ss_dssp CTTCCCCSSSCCCC
T ss_pred CcccccCCCCCCCC
Confidence 99999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=4.1e-41 Score=366.54 Aligned_cols=226 Identities=17% Similarity=0.226 Sum_probs=178.9
Q ss_pred CcccHHHhhcccCCCCCcccceEEcCCCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHH--c-CCe
Q 009115 28 THESFLQCLSLHSENSTSISKVIYTQYNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQK--Y-GMQ 104 (543)
Q Consensus 28 ~~~~~~~c~~~~~~~~~~~~~~v~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~--~-~~~ 104 (543)
..+++.+||.... +.+.|.. +...+.. | ...|+......|.+|++|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~-----~~~~v~~-~~~~~~~----~--~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALA-----LDGKLRT-DSNATAA----A--STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTT-----TTTCEEC-SHHHHHH----T--SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcC-----CCceEec-CHHHHHH----H--hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 5668888887633 1334443 2222222 2 234777677899999999999999999999998 6 999
Q ss_pred EEEeeCCCCCCCCCcccCCCCCeEEEEeccCcc------EEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecC-CCCC
Q 009115 105 IRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSS------ISIDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPA-GSCP 177 (543)
Q Consensus 105 v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~------i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~ 177 (543)
|+++|||||+.|.+.+.+ +++|||++||+ +++|++..+|+||||+++.+|++++.++| +..+. +...
T Consensus 98 v~~~G~G~~~~g~~~~~~----gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~ 171 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAPG----GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYL 171 (534)
T ss_dssp EEEESSCCCSSSTTCCTT----SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSC
T ss_pred EEEECCCCCCCCCcCCCC----eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCC
Confidence 999999999998877655 89999999998 48898889999999999999999999986 44443 3346
Q ss_pred CccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-ccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEE
Q 009115 178 SVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVT 256 (543)
Q Consensus 178 ~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~ 256 (543)
.++|||.+++||.|.++++||.++|+|+++|||++||++++ +..+|+||||++||| +|+|||||+++||++|.|+...
T Consensus 172 ~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs-~G~~GIVt~~~l~l~p~~~~~~ 250 (534)
T 1w1o_A 172 YLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGG-LGQFGVITRARIAVEPAPARAR 250 (534)
T ss_dssp CSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTC-TTCSEEEEEEEEEEEECCSEEE
T ss_pred CEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCC-CCCcEEEEEEEEEEEECCcceE
Confidence 78999999999999999999999999999999999999999 777899999999999 5899999999999999998766
Q ss_pred EEEEEcCchHHHHHHH
Q 009115 257 VFTVRRPWDQIATKLV 272 (543)
Q Consensus 257 ~~~~~~~~~~~~~~~~ 272 (543)
.+.+.|...+.+.+.+
T Consensus 251 ~~~~~~~~~~~~~~~~ 266 (534)
T 1w1o_A 251 WVRFVYTDFAAFSADQ 266 (534)
T ss_dssp EEEEEESCHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHH
Confidence 6667776544343333
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=6.7e-35 Score=316.10 Aligned_cols=200 Identities=21% Similarity=0.307 Sum_probs=170.5
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHH-cCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeC-----C
Q 009115 70 RFSTPATPKPLVIITPIHVSHIQAAIKCSQK-YGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDV-----E 143 (543)
Q Consensus 70 r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~-~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~-----~ 143 (543)
.|+......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+...+ +++|||++||+|++|. +
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~----gvvidl~~m~~i~i~~~~~~~~ 128 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG----GLVVDMSTTAENHFEVGYLSGG 128 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT----SEEEEGGGGTTSCEEEEECCSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC----EEEEECcCCCCcEEeecccCCC
Confidence 4766667799999999999999999999996 9999999999999998877655 8999999999987776 5
Q ss_pred C--CEEEEeCCCcHHHHHHH-HHHhCCCCeec-CCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-
Q 009115 144 N--KTAWVQVGATLGQLYYR-IAEKSPNLAFP-AGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD- 218 (543)
Q Consensus 144 ~--~~v~v~~G~~~~~l~~~-l~~~g~~l~~~-~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~- 218 (543)
. .+|+||||+++.++++. +.++| +..+ .+.++.++|||.++++|.|..+.+||.++|+|++++||++||++++
T Consensus 129 ~~~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~ 206 (524)
T 2exr_A 129 DATAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTC 206 (524)
T ss_dssp SSSEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEE
T ss_pred CCceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEE
Confidence 5 79999999999998655 44886 4322 2344678999999999999999999999999999999999999999
Q ss_pred ccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCchHHHHHHHHHHH
Q 009115 219 RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWDQIATKLVHRWQ 276 (543)
Q Consensus 219 ~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (543)
+..+|+||||++||| +|+|||||+++||++|.|+....+.+.|+..+.+.+.+..+.
T Consensus 207 ~~~~~~dL~~~~~Gs-~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~ 263 (524)
T 2exr_A 207 SEIENSELFFSVLGG-LGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLV 263 (524)
T ss_dssp ESSSSHHHHHHHTTC-TTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCChhHHhHhhcC-CCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHH
Confidence 666789999999999 589999999999999999977777777766554544444443
No 13
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=7.8e-35 Score=323.65 Aligned_cols=205 Identities=21% Similarity=0.220 Sum_probs=180.7
Q ss_pred CCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCC-CCCeEEEEeccCccE-EEeCCCCEEE
Q 009115 71 FSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSY-NSPFVIIDMINLSSI-SIDVENKTAW 148 (543)
Q Consensus 71 ~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~-~~~givIdl~~~~~i-~~d~~~~~v~ 148 (543)
|++.....|++||+|+|+|||+++|++|+++++||+++|||||+.|...+... ..++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 67777889999999999999999999999999999999999998866554321 235899999999998 9999999999
Q ss_pred EeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-----ccCCC
Q 009115 149 VQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-----RKSMG 223 (543)
Q Consensus 149 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-----~~~~~ 223 (543)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|..+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999986555567788889999999999999999999999999999999999999986 23467
Q ss_pred ccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCchHHHHHHHHHHH
Q 009115 224 EDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWDQIATKLVHRWQ 276 (543)
Q Consensus 224 ~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (543)
+||+|.++|| +|+|||||+++|||+|.|+....+.+.|+..+++.+++..+.
T Consensus 358 yDL~~L~iGS-EGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~ 409 (658)
T 4bby_A 358 PDIHHFIMGS-EGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIA 409 (658)
T ss_dssp SCTHHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred cCHHHHhccC-CCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHH
Confidence 9999999999 799999999999999999988778888876665666555443
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.2e-32 Score=294.49 Aligned_cols=198 Identities=19% Similarity=0.244 Sum_probs=168.0
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHHc--CCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccE-EEeCCCCE
Q 009115 70 RFSTPATPKPLVIITPIHVSHIQAAIKCSQKY--GMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSI-SIDVENKT 146 (543)
Q Consensus 70 r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~--~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~ 146 (543)
.|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+...+ +++|||++||+| ++|+++++
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~~----gvvIdl~~l~~i~~~d~~~~~ 109 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGG----GLVIDMTPLNTIHSIDADTKL 109 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCTT----SEEEECTTCCCEEEEETTTTE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCcC----eEEEECccCCCceEEcCCCCE
Confidence 4854 578999999999999999999999999 799999999999977655434 899999999999 99999999
Q ss_pred EEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-ccC-CCc
Q 009115 147 AWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-RKS-MGE 224 (543)
Q Consensus 147 v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~-~~~ 224 (543)
|+||||+++.+|++.|.++|+.+...+|. ..++|||.+++|++|..+..||..+|+|+++|||++||++++ +.. +|+
T Consensus 110 v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~ 188 (481)
T 4feh_A 110 VDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDA 188 (481)
T ss_dssp EEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTH
T ss_pred EEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCCh
Confidence 99999999999999999997433333444 467899999999999999999999999999999999999999 666 899
Q ss_pred cchhheeccCCCCeEEEEEEEEEEEecCCeEEE-EEEEcCchHHHHHHHHHHHH
Q 009115 225 DLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTV-FTVRRPWDQIATKLVHRWQH 277 (543)
Q Consensus 225 dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 277 (543)
||||++||| .|+|||||+++||++|.++.... ....+.. ..++++.+++
T Consensus 189 dLf~a~rgs-~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~---l~~~~~~~~~ 238 (481)
T 4feh_A 189 ELFWATVGG-NGLTGIIMRATIEMTPTSTAYFIADGDVTAS---LDETIALHSD 238 (481)
T ss_dssp HHHHHHTTC-TTTTCEEEEEEEECEECSCSEEEEEEEECSS---HHHHHHHHSS
T ss_pred HHHHHhhcc-CCCceEEEEEEEEEEeCCccEEEEEEEeCCC---HHHHHHHHHH
Confidence 999999999 58999999999999999864332 2333322 3445555543
No 15
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=5.3e-32 Score=293.77 Aligned_cols=199 Identities=22% Similarity=0.281 Sum_probs=167.0
Q ss_pred CCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCC-CCCcccCCCCCeEEEEeccCccE-EEeCCCCEEEEeCC
Q 009115 75 ATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYE-GLSFRTSYNSPFVIIDMINLSSI-SIDVENKTAWVQVG 152 (543)
Q Consensus 75 ~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~-g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~v~v~~G 152 (543)
....|.+||+|+|++||+++|++|+++++||+++|+|||+. |.+.... .++++|||++||+| ++|+++++|+||||
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~--~~gvvidl~~m~~i~~id~~~~~v~v~aG 130 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQ--RGQVILDLKKMNKIIKIDPEMCYALVEPG 130 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSS--TTCEEEECTTCCCEEEEETTTTEEEECTT
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCC--CCeEEEECCCCCceEEECCCCCEEEECCC
Confidence 35689999999999999999999999999999999999986 6544311 14899999999999 99999999999999
Q ss_pred CcHHHHHHHHHHhCCCCeecCC---CCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-cc--CCCccc
Q 009115 153 ATLGQLYYRIAEKSPNLAFPAG---SCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-RK--SMGEDL 226 (543)
Q Consensus 153 ~~~~~l~~~l~~~g~~l~~~~g---~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~--~~~~dl 226 (543)
+++.+|+++|.++|. .++++ ....+||||.+++||.|.. +||..+|+|+++|||++||++++ +. .+++|+
T Consensus 131 v~~~~l~~~l~~~Gl--~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l 206 (520)
T 1wvf_A 131 VTFGQMYDYIQENNL--PVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNT 206 (520)
T ss_dssp CCHHHHHHHHHHTTC--SEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSC
T ss_pred CCHHHHHHHHHHcCC--cccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchh
Confidence 999999999999974 44443 3337889999999998876 89999999999999999999998 32 468899
Q ss_pred hhheeccCC---------CCeEEEEEEEEEEEecCCeEEEEEEEcCchHHHHHHHHHHHHhh
Q 009115 227 FWAIRGGGG---------ASFGVIVAWKIKLVDVPSTVTVFTVRRPWDQIATKLVHRWQHVA 279 (543)
Q Consensus 227 ~~a~rG~g~---------g~~Givt~~~lk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (543)
|++.+|+.| ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 207 ~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 207 WQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred HhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 887777632 59999999999999999977777788876555656565666554
No 16
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.8e-33 Score=296.86 Aligned_cols=205 Identities=22% Similarity=0.249 Sum_probs=179.9
Q ss_pred ccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccE-EEeCCCCEE
Q 009115 69 LRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSI-SIDVENKTA 147 (543)
Q Consensus 69 ~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~v 147 (543)
..|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... ++++|||++||+| ++|+++.++
T Consensus 42 ~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~---ggvvIdl~~m~~i~~id~~~~~v 118 (476)
T 3pm9_A 42 TEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN---GEVVISLKRMDKIREIDTSSNTI 118 (476)
T ss_dssp BCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS---SCEEEECTTCCCEEEEETTTTEE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC---CcEEEEeeCCCceEEEcCCCCeE
Confidence 357766678999999999999999999999999999999999999998877643 4899999999999 899999999
Q ss_pred EEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-c-----cC
Q 009115 148 WVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-R-----KS 221 (543)
Q Consensus 148 ~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~-----~~ 221 (543)
+||||+++.+|.++|.++|+.+.+.++++..++|||++++++.|..+.+||.++|+|+++|||++||++++ . ..
T Consensus 119 ~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~ 198 (476)
T 3pm9_A 119 TVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDN 198 (476)
T ss_dssp EEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCC
T ss_pred EECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCC
Confidence 99999999999999999974333345677789999999999999999999999999999999999999997 2 34
Q ss_pred CCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCchHHHHHHHHHHHH
Q 009115 222 MGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWDQIATKLVHRWQH 277 (543)
Q Consensus 222 ~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (543)
.++||+|+++|+ +|+|||||+++||++|.|+......+.|+..+++.+++..+++
T Consensus 199 ~g~dl~~l~~Gs-~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 199 TGYDLRDLFIGA-EGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp SSCCCHHHHTTS-TTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCcCHHHHhccC-CCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 578999999999 5899999999999999999777777778766666666666654
No 17
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=1.2e-31 Score=283.98 Aligned_cols=175 Identities=17% Similarity=0.272 Sum_probs=156.3
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccE-EEeCCCCEEE
Q 009115 70 RFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSI-SIDVENKTAW 148 (543)
Q Consensus 70 r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~v~ 148 (543)
.|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+... .++++|||++||+| ++|+++++|+
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~---~~g~vi~l~~l~~i~~~d~~~~~v~ 84 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG---DGGVLLSLAGLPSVVDVDTAARTVR 84 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC---TTCEEECSTTSCCCEEEETTTTEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC---CCcEEEEhhhCCCcEEEcCCCCEEE
Confidence 48888888999999999999999999998 8999999999998877632 24899999999998 9999999999
Q ss_pred EeCCCcHHHHHHHHHHhCCCCeec-CCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-ccCCCccc
Q 009115 149 VQVGATLGQLYYRIAEKSPNLAFP-AGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-RKSMGEDL 226 (543)
Q Consensus 149 v~~G~~~~~l~~~l~~~g~~l~~~-~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl 226 (543)
||||+++.+|.++|.++|+ .++ .+.++.++|||.+++|++|.. .+||.++|+|+++++|++||++++ +..+|+
T Consensus 85 v~aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~-- 159 (422)
T 2vfr_A 85 VGGGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER-- 159 (422)
T ss_dssp EETTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--
T ss_pred EcCCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--
Confidence 9999999999999999974 444 477788999999999999976 699999999999999999999999 666665
Q ss_pred hhheeccCCCCeEEEEEEEEEEEecCCeEEE
Q 009115 227 FWAIRGGGGASFGVIVAWKIKLVDVPSTVTV 257 (543)
Q Consensus 227 ~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~ 257 (543)
||+++|+ +|+|||||+++||++|.++....
T Consensus 160 f~~~~g~-~G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 160 FGGAVTS-LGALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GGGTSSC-TTTTCEEEEEEEECEECCEEEEE
T ss_pred cceEEec-CCCCEEEEEEEEEEEecCceEEE
Confidence 9999999 58999999999999999985433
No 18
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=6.1e-32 Score=295.35 Aligned_cols=206 Identities=22% Similarity=0.249 Sum_probs=170.9
Q ss_pred CCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccE-EEeCCCCEEEE
Q 009115 71 FSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSI-SIDVENKTAWV 149 (543)
Q Consensus 71 ~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~v~v 149 (543)
|.+.....|.+||+|+|++||+++|++|+++++||+++|||||+.|.+......+++++|||++||+| ++|+++.+|+|
T Consensus 130 ~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v 209 (584)
T 2uuu_A 130 RIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACI 209 (584)
T ss_dssp HTTCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEE
T ss_pred ccCccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEE
Confidence 33334568999999999999999999999999999999999999877665311124899999999999 99999999999
Q ss_pred eCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee----ccCCCcc
Q 009115 150 QVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD----RKSMGED 225 (543)
Q Consensus 150 ~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~----~~~~~~d 225 (543)
|||+++.+|.++|.++|..+...+++...++|||++++|++|+.+.+||.++|+|+++|||++||++++ +...++|
T Consensus 210 ~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~d 289 (584)
T 2uuu_A 210 QVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGIN 289 (584)
T ss_dssp ETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCC
T ss_pred CCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcc
Confidence 999999999999999974322222223457899999999999999999999999999999999999886 3457899
Q ss_pred chhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcCchHHHHHHHHHHHH
Q 009115 226 LFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRPWDQIATKLVHRWQH 277 (543)
Q Consensus 226 l~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (543)
|+|+++|+ +|+|||||+++||++|.|+....+.+.|+..+++.+++..+.+
T Consensus 290 l~~~~~Gs-eGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 290 YKHIILGS-EGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRS 340 (584)
T ss_dssp THHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred hhhhhccC-CCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHh
Confidence 99999999 5899999999999999999777777788755555555554443
No 19
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=9.7e-29 Score=270.04 Aligned_cols=200 Identities=18% Similarity=0.180 Sum_probs=165.4
Q ss_pred CCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCC-CCCcc-cCCCCCeEEEEe-ccCccE-EEeCCCCEEEEe
Q 009115 75 ATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYE-GLSFR-TSYNSPFVIIDM-INLSSI-SIDVENKTAWVQ 150 (543)
Q Consensus 75 ~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~-g~~~~-~~~~~~givIdl-~~~~~i-~~d~~~~~v~v~ 150 (543)
....|.+||+|+|++||+++|++|+++++||+++|+|||+. |.+.+ .. ++++||| ++||+| ++|+++++|+||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~---~gvvidl~~~mn~il~id~~~~~v~v~ 143 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVS---GSVVLDMGKNMNRVLEVNVEGAYCVVE 143 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSST---TCEEEECTTTCCCEEEEETTTTEEEEC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcC---CEEEEEchHhcCCeEEEcCCCCEEEEe
Confidence 34689999999999999999999999999999999999986 65543 22 3899999 999999 999999999999
Q ss_pred CCCcHHHHHHHHHHhCCC--CeecCCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEee-cc--CCCc-
Q 009115 151 VGATLGQLYYRIAEKSPN--LAFPAGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFLD-RK--SMGE- 224 (543)
Q Consensus 151 ~G~~~~~l~~~l~~~g~~--l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~--~~~~- 224 (543)
||+++.+|.++|.++|.. +.+.++.....||||.++++|.|.. +||..+|+|+++|||++||++++ .. ..++
T Consensus 144 aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~ 221 (560)
T 1e8g_A 144 PGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPK 221 (560)
T ss_dssp TTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCC
T ss_pred CCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCccc
Confidence 999999999999999854 3333444446789999988888865 89999999999999999999998 33 2231
Q ss_pred --------------cchhheeccC----------CCCeEEEEEEEEEEEecCCeEEEEEEEcCchHHHHHHHHHHHHhh
Q 009115 225 --------------DLFWAIRGGG----------GASFGVIVAWKIKLVDVPSTVTVFTVRRPWDQIATKLVHRWQHVA 279 (543)
Q Consensus 225 --------------dl~~a~rG~g----------~g~~Givt~~~lk~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (543)
+++|+++++| +|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 222 ~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 222 RPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp CGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6666666431 479999999999999999987778888876666666666666654
No 20
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=8.1e-30 Score=278.21 Aligned_cols=206 Identities=10% Similarity=0.108 Sum_probs=168.2
Q ss_pred cceEEcC-CCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCC-C
Q 009115 47 SKVIYTQ-YNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSY-N 124 (543)
Q Consensus 47 ~~~v~~~-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~-~ 124 (543)
+..+++| +++.|++.. ..|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.+...+. .
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4567788 999999743 3588888889999999999999999999999999999999999999764433221 1
Q ss_pred CCeEEEEe-ccCccEEEeC--CCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCC--------
Q 009115 125 SPFVIIDM-INLSSISIDV--ENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGIL-------- 193 (543)
Q Consensus 125 ~~givIdl-~~~~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~-------- 193 (543)
.++++||| ++||+|++|+ +.++|+||||+++.+|.++|.++|+.+...++. +.++|||.+++|++|.+
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCC-CCcccCCCcccCCcccccccCCccc
Confidence 24899999 8999999998 889999999999999999999997544332333 55788998887777765
Q ss_pred --ccccCchhhheeeEEEEeeCCc---Eee-ccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEcC
Q 009115 194 --LRKYGLAADNIVDARMIDVQGR---FLD-RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRRP 263 (543)
Q Consensus 194 --~~~~G~~~d~v~~~~vV~~~G~---~~~-~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~~ 263 (543)
+.+||.++|+|+++|||++||+ +++ ++ +++||+|+++|.| . ||||+++||++|.++........++
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~-~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~~~~~~~ 233 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQR-NDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQSYTDIP 233 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEET-TSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEEEECCSC
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccC-CCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEEEEEccC
Confidence 6679999999999999999999 666 44 4799999999663 4 8999999999999975444333344
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=4e-29 Score=267.42 Aligned_cols=190 Identities=14% Similarity=0.201 Sum_probs=155.3
Q ss_pred CCCCcHHHHHhhhccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCC-CCCeEEEEe
Q 009115 54 YNSSYSSVLELTLQNLRFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSY-NSPFVIIDM 132 (543)
Q Consensus 54 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~-~~~givIdl 132 (543)
+.+.|+... ..|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.....+. .+++++|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 555676542 2499888899999999999999999999999999999999999998633221110 124899999
Q ss_pred c-cCccEEEeCC--CCEEEEeCCCcHHHHHHHHHHhCCCCeecC-CCCCCccccccCcCCCCCCC----------ccccC
Q 009115 133 I-NLSSISIDVE--NKTAWVQVGATLGQLYYRIAEKSPNLAFPA-GSCPSVGTGGHISGGGWGIL----------LRKYG 198 (543)
Q Consensus 133 ~-~~~~i~~d~~--~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~G~~----------~~~~G 198 (543)
+ +||+|++|++ .++|+||+|+++.+|+++|.++| +.++. +..+.++|||++++|++|.. +++||
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G 162 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYG 162 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSS
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccc
Confidence 5 7999999985 68999999999999999999997 44442 33466899999999999986 58999
Q ss_pred chhhheeeEEEEeeCCc-----Eee-ccCCCccchhheeccCCCCeEEEEEEEEEEEecCCeE
Q 009115 199 LAADNIVDARMIDVQGR-----FLD-RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTV 255 (543)
Q Consensus 199 ~~~d~v~~~~vV~~~G~-----~~~-~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~ 255 (543)
.++|+|++++||++||+ +++ ++ +++||+ ++|+|+ |+ ||||+++||++|.++..
T Consensus 163 ~~~D~V~~levV~adG~~~~~~i~~~s~-~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 163 SISNLVLSLTAVVYDKASGAYALRKFAR-NDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp CGGGGEEEEEEEEEETTTTEEEEEEEET-TSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred cHHHhEEEEEEEcCCCCCceeeEEEeCC-CChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 99999999999999998 666 54 689985 455553 45 59999999999998743
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=6.4e-29 Score=269.71 Aligned_cols=200 Identities=15% Similarity=0.161 Sum_probs=166.8
Q ss_pred CCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCC--CCCeEEEEeccCccE-EEeCCCCEE
Q 009115 71 FSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSY--NSPFVIIDMINLSSI-SIDVENKTA 147 (543)
Q Consensus 71 ~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~--~~~givIdl~~~~~i-~~d~~~~~v 147 (543)
|+ .....|.+||+|+|++||+++|++|+++++||+++|||||+.|.+.+.+. +.++++|||++||+| ++|+ .++|
T Consensus 39 ~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v 116 (571)
T 1f0x_A 39 FR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQV 116 (571)
T ss_dssp SS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEE
T ss_pred cc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeE
Confidence 54 24578999999999999999999999999999999999999987776530 013899999999999 8994 5899
Q ss_pred EEeCCCcHHHHHHHHHHhCCCCeecC---CCCCCccccccCcCCCCCCCccccCchhh----------------heeeEE
Q 009115 148 WVQVGATLGQLYYRIAEKSPNLAFPA---GSCPSVGTGGHISGGGWGILLRKYGLAAD----------------NIVDAR 208 (543)
Q Consensus 148 ~v~~G~~~~~l~~~l~~~g~~l~~~~---g~~~~vgigG~~~ggg~G~~~~~~G~~~d----------------~v~~~~ 208 (543)
+|+||+++.+|.++|.++| +.++. ++|..++|||.++++++|..+.+||..+| +|++++
T Consensus 117 ~v~aGv~l~~L~~~l~~~G--l~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~le 194 (571)
T 1f0x_A 117 LAYPGTTLYSLEKALKPLG--REPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGID 194 (571)
T ss_dssp EECTTCBHHHHHHHHGGGT--EECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBC
T ss_pred EEcCCcCHHHHHHHHHhcC--ccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEE
Confidence 9999999999999999997 44432 23445689999999999999999999999 999999
Q ss_pred EEeeCCcEee-cc-----------------CCCc-----------------cchhhe--eccCCCCeEEEEEEEEEEEec
Q 009115 209 MIDVQGRFLD-RK-----------------SMGE-----------------DLFWAI--RGGGGASFGVIVAWKIKLVDV 251 (543)
Q Consensus 209 vV~~~G~~~~-~~-----------------~~~~-----------------dl~~a~--rG~g~g~~Givt~~~lk~~p~ 251 (543)
||++||++++ .. ..++ ||+|++ +|| +|+||| |+++||++|.
T Consensus 195 vVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gs-eGtlGV-t~~tl~l~p~ 272 (571)
T 1f0x_A 195 LGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGC-AGKLAV-FAVRLDTFEA 272 (571)
T ss_dssp CCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTC-TTSSEE-EEEEEECEEC
T ss_pred EEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCC-CCceeE-EEEEEEEEec
Confidence 9999999997 31 1233 988888 998 689999 9999999999
Q ss_pred CCeEEEEEEEcCchHHHHHHHHHHH
Q 009115 252 PSTVTVFTVRRPWDQIATKLVHRWQ 276 (543)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (543)
|+....+.+.|+..+++.+++..++
T Consensus 273 p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 273 EKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp CSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 9977777777776555666665555
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=1.7e-25 Score=226.63 Aligned_cols=162 Identities=18% Similarity=0.184 Sum_probs=135.6
Q ss_pred CCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCc
Q 009115 75 ATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGAT 154 (543)
Q Consensus 75 ~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~ 154 (543)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++|++|++|. .+|+|+||++
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~----gvvI~l~~~~~I~~d~--~~v~v~aG~~ 124 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR----GVILHLDLLQTIERNN--TQIVAMSGAK 124 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE----EEEEECTTCCCEEEET--TEEEEETTSB
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC----eEEEECCCCCcEEECC--CEEEEecCcC
Confidence 456899999999999999999999999999999999999876544444 8999999999998864 5999999999
Q ss_pred HHHHHHHHHHhCC-CCeecCCCCCCccccccCc--CCCCCCCccccCchhhheeeEEEEeeCCcEee-ccCCCccchhhe
Q 009115 155 LGQLYYRIAEKSP-NLAFPAGSCPSVGTGGHIS--GGGWGILLRKYGLAADNIVDARMIDVQGRFLD-RKSMGEDLFWAI 230 (543)
Q Consensus 155 ~~~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~--ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~ 230 (543)
|.+|.+++.++|+ ++.+..|.+.+| ||.+. .||+| |.++|+|++++||++||++++ +. +|++|+|
T Consensus 125 ~~~l~~~l~~~Gl~Gle~~~giPgTV--GGav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~~---~~~~~~y 193 (322)
T 3tx1_A 125 LIDTAKFALNESLSGLEFACGIPGSI--GGALHMNAGAYG------GEISDVLEAATVLTQTGELKKLKR---SELKAAY 193 (322)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCSBH--HHHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEEG---GGCC--C
T ss_pred HHHHHHHHHHcCCcccccCCCCcchh--HHHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEech---HHcCcch
Confidence 9999999999984 566788888765 45554 44443 799999999999999999998 43 6999999
Q ss_pred eccCCC-CeEEEEEEEEEEEecCC
Q 009115 231 RGGGGA-SFGVIVAWKIKLVDVPS 253 (543)
Q Consensus 231 rG~g~g-~~Givt~~~lk~~p~~~ 253 (543)
|++..+ .+||||+++||++|.|+
T Consensus 194 R~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 194 RFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp C-CTTTGGGCEEEEEEEECEECCH
T ss_pred hhcccCCCCEEEEEEEEEEEeCCH
Confidence 988544 57899999999999874
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=1.2e-24 Score=221.63 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=135.4
Q ss_pred CCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCc
Q 009115 75 ATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGAT 154 (543)
Q Consensus 75 ~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~ 154 (543)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++||+|++|. ++++||||++
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~----gvvI~l~~m~~i~id~--~~v~v~aGv~ 118 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR----GIVISLLSLDHIEVSD--DAIIAGSGAA 118 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE----EEEEECTTCCCEEEET--TEEEEETTSB
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC----eEEEEeCCCCceEEcC--CEEEEeCCCc
Confidence 456899999999999999999999999999999999999886655445 8999999999998873 6999999999
Q ss_pred HHHHHHHHHHhCC-CCeecCCCCCCccccccCcCCCCCCCccccC-chhhheeeEEEEeeCCcEee-ccCCCccchhhee
Q 009115 155 LGQLYYRIAEKSP-NLAFPAGSCPSVGTGGHISGGGWGILLRKYG-LAADNIVDARMIDVQGRFLD-RKSMGEDLFWAIR 231 (543)
Q Consensus 155 ~~~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G-~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~r 231 (543)
+.+|.+++.++|+ ++.+.++.+. +|||.+.+++.| || .++|+|++++||++||++++ .. .|++|++|
T Consensus 119 ~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~---~~~~~gyr 188 (326)
T 1hsk_A 119 IIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT---KELELDYR 188 (326)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET---TTTTCBTT
T ss_pred HHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh---HHcCCCcc
Confidence 9999999999984 4445566555 477777665544 88 99999999999999999998 43 28899999
Q ss_pred ccC---CCCeEEEEEEEEEEEec
Q 009115 232 GGG---GASFGVIVAWKIKLVDV 251 (543)
Q Consensus 232 G~g---~g~~Givt~~~lk~~p~ 251 (543)
++. .| ||||+++||++|.
T Consensus 189 ~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 189 NSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp BCHHHHTT--CEEEEEEEECEEC
T ss_pred ccccCCCC--EEEEEEEEEEEcC
Confidence 742 23 9999999999998
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=2.3e-24 Score=220.52 Aligned_cols=165 Identities=13% Similarity=0.037 Sum_probs=140.3
Q ss_pred CCCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeC--CCCEEEEeC
Q 009115 74 PATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDV--ENKTAWVQV 151 (543)
Q Consensus 74 ~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~--~~~~v~v~~ 151 (543)
.....|.++++|+|++||+++|++|+++++|+.++|+|||..+.+. .+ |+||+++ |++|+++. +..+|+|++
T Consensus 26 ~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~----GvVI~l~-~~~i~v~~~~~~~~v~v~A 99 (357)
T 3i99_A 26 GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT----GMIVVNR-LNGIEHQQDDDYHRLHVAG 99 (357)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE----EEEEEEC-CCCEEEEECSSEEEEEEET
T ss_pred CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC----eEEEEcC-CCceEEeccCCceEEEEeC
Confidence 3456889999999999999999999999999999999999876655 55 8999998 99998754 456899999
Q ss_pred CCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCc-hhhheeeEEEEee-CCcEee-ccCCCccchh
Q 009115 152 GATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGL-AADNIVDARMIDV-QGRFLD-RKSMGEDLFW 228 (543)
Q Consensus 152 G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~-~~d~v~~~~vV~~-~G~~~~-~~~~~~dl~~ 228 (543)
|++|.+|.+++.++|+ .|.....||.| ..||+.+++.+.||. ++|+|+++++|++ +|++++ +. .|++|
T Consensus 100 G~~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~~---~dl~f 170 (357)
T 3i99_A 100 GEDWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLTM---EECQF 170 (357)
T ss_dssp TSBHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET---GGGCC
T ss_pred CCcHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEeH---HHcCc
Confidence 9999999999999983 23444444544 347788888999997 8999999999999 999998 43 59999
Q ss_pred heeccCC----CCeEEEEEEEEEEEecCC
Q 009115 229 AIRGGGG----ASFGVIVAWKIKLVDVPS 253 (543)
Q Consensus 229 a~rG~g~----g~~Givt~~~lk~~p~~~ 253 (543)
+||++.. +++||||+++||++|.++
T Consensus 171 ~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 171 GYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp BTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 9998854 379999999999999764
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.89 E-value=9.3e-23 Score=208.05 Aligned_cols=164 Identities=13% Similarity=0.035 Sum_probs=138.2
Q ss_pred CCCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccE-EEeCCC-CEEEEeCC
Q 009115 75 ATPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSI-SIDVEN-KTAWVQVG 152 (543)
Q Consensus 75 ~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i-~~d~~~-~~v~v~~G 152 (543)
....|.++++|+|++||++++++|+++++|+.++|||||..+.+. .+ |+||+|+ |++| .++.+. .+++|++|
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~----GvVI~l~-~~~i~~i~~~~~~~v~vgAG 84 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR----GTVIINR-IKGIEIHDEPDAWYLHVGAG 84 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE----EEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC----eEEEEcc-CCCcEEEecCCCeEEEEecC
Confidence 445799999999999999999999999999999999999876553 45 8999996 9998 466666 69999999
Q ss_pred CcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCc-hhhheeeEEEEee-CCcEee-ccCCCccchhh
Q 009115 153 ATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGL-AADNIVDARMIDV-QGRFLD-RKSMGEDLFWA 229 (543)
Q Consensus 153 ~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~-~~d~v~~~~vV~~-~G~~~~-~~~~~~dl~~a 229 (543)
++|.+|.+++.++|+ .|.....||.| ..||+..++.+.||. ++|+|.++++|++ +|++++ +. .|++|+
T Consensus 85 ~~~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~---~d~~~g 155 (340)
T 1uxy_A 85 ENWHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTA---KECRFG 155 (340)
T ss_dssp SBHHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET---GGGTCB
T ss_pred CCHHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeH---HHhccc
Confidence 999999999999974 23344445555 447888888899995 8999999999996 999998 43 599999
Q ss_pred eeccCC----CCeEEEEEEEEEEEecCC
Q 009115 230 IRGGGG----ASFGVIVAWKIKLVDVPS 253 (543)
Q Consensus 230 ~rG~g~----g~~Givt~~~lk~~p~~~ 253 (543)
||++.. +++||||+++||+.|.++
T Consensus 156 YR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 156 YRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 998742 369999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.85 E-value=2.3e-21 Score=191.04 Aligned_cols=152 Identities=20% Similarity=0.170 Sum_probs=125.9
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccEEEeCCCCEEEEeCCCcH
Q 009115 76 TPKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSISIDVENKTAWVQVGATL 155 (543)
Q Consensus 76 ~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i~~d~~~~~v~v~~G~~~ 155 (543)
...|. +++|+|++||+++| ++|+.++|+|||..+.+.+.. ++++|+|++|++|++|. +|+||++|
T Consensus 20 gg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~---~GvVI~l~~~~~I~vd~-----~v~aG~~~ 84 (268)
T 2gqt_A 20 GGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP---ERVIRLAGEFQTYDLKG-----WVGAGTLL 84 (268)
T ss_dssp CCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS---SEEEEECGGGGCBCTTS-----EEETTSBH
T ss_pred CcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC---CeEEEEcCCCCCcEEcC-----EEECCCCH
Confidence 34566 99999999999999 899999999999886555432 48999999999998652 99999999
Q ss_pred HHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccC-chhhheeeEEEEeeCCcEee-ccCCCccchhheecc
Q 009115 156 GQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYG-LAADNIVDARMIDVQGRFLD-RKSMGEDLFWAIRGG 233 (543)
Q Consensus 156 ~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G-~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rG~ 233 (543)
.+|.+++.++| | .|.....++.| ..||+.+++.+.|| .++|+|+++++| +||++++ +. .|++|+||++
T Consensus 85 ~~l~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~---~~l~~~YR~s 154 (268)
T 2gqt_A 85 PLLVQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP---EELGFGYRKS 154 (268)
T ss_dssp HHHHHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG---GGSCCBTTBC
T ss_pred HHHHHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch---HHcccccCCC
Confidence 99999999997 3 24445555655 45788888888999 699999999999 9999998 43 5899999998
Q ss_pred CCCCeEEEEEEEEEEEecC
Q 009115 234 GGASFGVIVAWKIKLVDVP 252 (543)
Q Consensus 234 g~g~~Givt~~~lk~~p~~ 252 (543)
....-||||+++||++|.+
T Consensus 155 ~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 155 HLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp CCSTTCEEEEEEECCEECC
T ss_pred CcCCCceEEEEEEEEEeCC
Confidence 5211149999999999985
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=1.5e-19 Score=173.10 Aligned_cols=119 Identities=17% Similarity=0.215 Sum_probs=99.9
Q ss_pred EEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCeecCCCCCCccccccCcCCCCCCCccccCchhhheeeEEEEeeCCcEe
Q 009115 138 ISIDVENKTAWVQVGATLGQLYYRIAEKSPNLAFPAGSCPSVGTGGHISGGGWGILLRKYGLAADNIVDARMIDVQGRFL 217 (543)
Q Consensus 138 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~~~~vV~~~G~~~ 217 (543)
|++|+++++|+||+|+++.+|+++|.++|..+...+|+++. +|||++++|++| .+||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47899999999999999999999999987422222344555 999999999998 899999 9999999999999999
Q ss_pred e-cc-----CCCccchhheeccCCCCeEEEEEEEEEEEecCCeEEEEEEEc
Q 009115 218 D-RK-----SMGEDLFWAIRGGGGASFGVIVAWKIKLVDVPSTVTVFTVRR 262 (543)
Q Consensus 218 ~-~~-----~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~~~~~~~~~~~ 262 (543)
+ +. ..++||||+++|+ +|+|||||+++||++|.++....+.+.+
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs-~G~lGIVt~~tlrl~p~~~~~~~~~~~~ 125 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGS-FGLLGRAEEVVLRLRPGRAQAFLRRPFS 125 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTC-TTTTCEEEEEEEECEECSEEEEEEEECC
T ss_pred EECCccccCCCCcchHHHhccC-CCceEEEEEEEEEEEECCcccEEEEEec
Confidence 8 33 2468999999998 5899999999999999998665554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.18 E-value=3.1e-06 Score=84.17 Aligned_cols=158 Identities=18% Similarity=0.155 Sum_probs=101.3
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCC---CcccCCCCCeEEEEecc---CccEEEeCCCCEEEEe
Q 009115 77 PKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGL---SFRTSYNSPFVIIDMIN---LSSISIDVENKTAWVQ 150 (543)
Q Consensus 77 ~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~---~~~~~~~~~givIdl~~---~~~i~~d~~~~~v~v~ 150 (543)
+.|-.++.|+|.+|+.++++. ++.+..+.||||+.... .... .+++||+++ |+.|+++ .+.+++|
T Consensus 3 ~~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~----~~~lIdl~~i~eL~~i~~~--~~~l~iG 73 (287)
T 1ffv_C 3 PPRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQ----PEHLIDINRIPELRGIREE--GSTVVIG 73 (287)
T ss_dssp CCCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCC----CSEEEECTTCGGGCCEEEE--TTEEEEE
T ss_pred CCcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCC----CCEEEECCCChhhcceEec--CCEEEEc
Confidence 345678999999999998875 34679999999995431 1112 379999984 6777664 3479999
Q ss_pred CCCcHHHHHH--HHHHhCCCCee----cCCCC--CCccccccCcCCCCCCCccccCchhhhee----eEEEEeeCCcEee
Q 009115 151 VGATLGQLYY--RIAEKSPNLAF----PAGSC--PSVGTGGHISGGGWGILLRKYGLAADNIV----DARMIDVQGRFLD 218 (543)
Q Consensus 151 ~G~~~~~l~~--~l~~~g~~l~~----~~g~~--~~vgigG~~~ggg~G~~~~~~G~~~d~v~----~~~vV~~~G~~~~ 218 (543)
+|+++.+|.+ .+.+.-.+|.. ..|.. +.-+|||.+..+.. .+.....++ .+++..++|+...
T Consensus 74 A~~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~------~~D~~~~l~Al~A~v~~~~~~G~r~i 147 (287)
T 1ffv_C 74 AMTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP------GNDHPALSIAVEAHFVLEGPNGRRTV 147 (287)
T ss_dssp TTCBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT------TCSHHHHHHHTTCEEEEEETTEEEEE
T ss_pred cCCcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC------cHHHHHHHHHcCcEEEEEcCCceEEE
Confidence 9999999996 34432111111 22221 23578998887742 233333333 6888889983222
Q ss_pred ccCCCccchhheeccCCCCeEEEEEEEEEEEecC
Q 009115 219 RKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDVP 252 (543)
Q Consensus 219 ~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~~ 252 (543)
.. .|+|.++|-..-..=-|||+++|.+.+..
T Consensus 148 ~~---~df~~g~~~t~l~~~eii~~i~ip~~~~~ 178 (287)
T 1ffv_C 148 PA---DGFFLGTYMTLLEENEVMVEIRVPAFAQG 178 (287)
T ss_dssp ES---TTTEEETTEESCCTTCEEEEEEEECCCTT
T ss_pred EH---HHHhcCcccccCCCCCEEEEEEecCCCCC
Confidence 32 48888876321111249999999876643
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.48 E-value=9.7e-05 Score=73.32 Aligned_cols=154 Identities=18% Similarity=0.156 Sum_probs=93.9
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCC---CcccCCCCCeEEEEecc---CccEEEeCCCCEEEEe
Q 009115 77 PKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGL---SFRTSYNSPFVIIDMIN---LSSISIDVENKTAWVQ 150 (543)
Q Consensus 77 ~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~---~~~~~~~~~givIdl~~---~~~i~~d~~~~~v~v~ 150 (543)
+.+-.++.|+|.+|+.++++. ++-+..+.+|||+.... .... ...+||+++ |+.|+. +.+.+++|
T Consensus 3 ~~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~----~~~lIdl~~i~eL~~I~~--~~~~l~IG 73 (288)
T 1n62_C 3 PGSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLAT----PEHLVDLRDIGDLVGIRE--EGTDVVIG 73 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCC----CSEEEECTTCGGGSCEEE--ETTEEEEE
T ss_pred CCceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCC----CCEEEECCCChhhcceEe--cCCEEEEc
Confidence 345568999999999888863 34468899999995321 1112 368999986 566655 44589999
Q ss_pred CCCcHHHHHH--HHHHhCCCCeecCCCC------CCccccccCcCCCCCCCccccCchhhhee-------eEEEEeeCCc
Q 009115 151 VGATLGQLYY--RIAEKSPNLAFPAGSC------PSVGTGGHISGGGWGILLRKYGLAADNIV-------DARMIDVQGR 215 (543)
Q Consensus 151 ~G~~~~~l~~--~l~~~g~~l~~~~g~~------~~vgigG~~~ggg~G~~~~~~G~~~d~v~-------~~~vV~~~G~ 215 (543)
+++++.+|.+ .+.++-..|.-..... +.-+|||.+..+. ..+|.+. .+++..++|+
T Consensus 74 A~~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~ 144 (288)
T 1n62_C 74 AMTTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA 144 (288)
T ss_dssp TTCBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE
T ss_pred cCCcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc
Confidence 9999999994 4544311111101111 1247899888772 1344433 5677778884
Q ss_pred EeeccCCCccchhheeccCCCCeEEEEEEEEEEEec
Q 009115 216 FLDRKSMGEDLFWAIRGGGGASFGVIVAWKIKLVDV 251 (543)
Q Consensus 216 ~~~~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~p~ 251 (543)
....- .|+|.+++-..-..=-|||++.|...+.
T Consensus 145 r~v~~---~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 145 RIVAA---RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp EEEEH---HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEEEH---HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 22221 3666655421011114899999876553
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.14 E-value=0.0002 Score=75.52 Aligned_cols=154 Identities=15% Similarity=0.085 Sum_probs=98.0
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEecc---CccEEEeCCCCEEEEeCCCcHHH
Q 009115 81 VIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMIN---LSSISIDVENKTAWVQVGATLGQ 157 (543)
Q Consensus 81 ~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~---~~~i~~d~~~~~v~v~~G~~~~~ 157 (543)
.++.|+|.+|+.++++.. . +..+.+||++....- ..+.....++||+++ |+.|+.+ .+.+++|+++++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~-k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWV-TKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHH-HTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhh-hccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 467899999998887653 2 578899999975320 000001368999988 6777765 44799999999999
Q ss_pred HHHHHHHhCCCC----eecCCCC--CCccccccCcCCCCCCCccccCchhhhee----eEEEEeeCCcEeeccCCCccch
Q 009115 158 LYYRIAEKSPNL----AFPAGSC--PSVGTGGHISGGGWGILLRKYGLAADNIV----DARMIDVQGRFLDRKSMGEDLF 227 (543)
Q Consensus 158 l~~~l~~~g~~l----~~~~g~~--~~vgigG~~~ggg~G~~~~~~G~~~d~v~----~~~vV~~~G~~~~~~~~~~dl~ 227 (543)
|.+.+.+.-..| ....+.. +.-+|||.+..+.+ .+....-++ .+++..++|+.... -.|+|
T Consensus 252 l~~~l~~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~R~vp---~~dF~ 322 (462)
T 2w3s_A 252 LRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQERRRMP---LEDFF 322 (462)
T ss_dssp HHHHHTTTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBCCCCB---GGGGE
T ss_pred HHHHHHHHhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCceEEEE---HHHhh
Confidence 998743320011 1112211 33578999888763 366777777 78888888842212 24788
Q ss_pred hheeccCCCCeEEEEEEEEEEEe
Q 009115 228 WAIRGGGGASFGVIVAWKIKLVD 250 (543)
Q Consensus 228 ~a~rG~g~g~~Givt~~~lk~~p 250 (543)
.++|-.--..=-|||++.|...+
T Consensus 323 ~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 323 LEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EETTEESCCTTCEEEEEEEESCC
T ss_pred cccccccCCCCcEEEEEEEecCC
Confidence 77653211111499999987654
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=94.40 E-value=0.059 Score=53.12 Aligned_cols=151 Identities=15% Similarity=0.073 Sum_probs=89.0
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCC---CcccCCCCCeEEEEeccC---ccEEEeCCCCEEEEe
Q 009115 77 PKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGL---SFRTSYNSPFVIIDMINL---SSISIDVENKTAWVQ 150 (543)
Q Consensus 77 ~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~---~~~~~~~~~givIdl~~~---~~i~~d~~~~~v~v~ 150 (543)
+.|--+++|+|.+|+.++++. +-...+.+|||+.... .... ...+||++++ +.|+. +.+.+++|
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~----~~~lIdl~~i~eL~~I~~--~~~~l~IG 72 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVY----PSCLVDLRNVSELFEISQ--SAGILSVG 72 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCC----CSEEEECTTCGGGGCEEE--ETTEEEEE
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCC----CCEEEECCCChhhcCeEE--cCCEEEEc
Confidence 455678999999999888753 2346778999994321 1112 2589999985 55554 45689999
Q ss_pred CCCcHHHHHH--HHHHhCCCCeec---CCC---CCCccccccCcCCCCCCCccccCchhhhee-------eEEEEeeCCc
Q 009115 151 VGATLGQLYY--RIAEKSPNLAFP---AGS---CPSVGTGGHISGGGWGILLRKYGLAADNIV-------DARMIDVQGR 215 (543)
Q Consensus 151 ~G~~~~~l~~--~l~~~g~~l~~~---~g~---~~~vgigG~~~ggg~G~~~~~~G~~~d~v~-------~~~vV~~~G~ 215 (543)
+++++.+|.+ .+.++-..|.-. .|+ -+..++||.+..+- ..+|... .+++..++|+
T Consensus 73 A~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~ 143 (288)
T 1t3q_C 73 AMVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGV 143 (288)
T ss_dssp TTCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEE
T ss_pred CCCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCce
Confidence 9999999986 444331111100 111 13347888887552 1355544 6777777775
Q ss_pred EeeccCCCccchhheeccCCCCeEEEEEEEEEEE
Q 009115 216 FLDRKSMGEDLFWAIRGGGGASFGVIVAWKIKLV 249 (543)
Q Consensus 216 ~~~~~~~~~dl~~a~rG~g~g~~Givt~~~lk~~ 249 (543)
....- .|+|.+.+--.-..=-|||++.|...
T Consensus 144 R~vp~---~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 144 RSVSA---TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp EEEEH---HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred EEEEH---HHHhcCcccccCCCCCEEEEEEecCC
Confidence 33221 25554432100011148999888543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=94.12 E-value=0.044 Score=54.53 Aligned_cols=154 Identities=10% Similarity=0.057 Sum_probs=90.6
Q ss_pred CceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCC---CcccCCCCCeEEEEeccCccE-EEeCCCCEEEEeCCC
Q 009115 78 KPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGL---SFRTSYNSPFVIIDMINLSSI-SIDVENKTAWVQVGA 153 (543)
Q Consensus 78 ~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~---~~~~~~~~~givIdl~~~~~i-~~d~~~~~v~v~~G~ 153 (543)
.+...++|+|.+|+.++++. +. ...+.+|||+.... .... ...+||++++.++ .|..+.+.+++|+++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~----~~~lIdl~~i~eL~~I~~~~~~l~IGA~v 80 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQL----FPMIICPAWIPELNAVEHGPEGISFGAAC 80 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCC----CSEEEECTTCGGGGCEEECSSEEEEETTC
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCC----CCEEEECCCChhhcceEECCCeEEEccCC
Confidence 45678999999998887643 22 35788999996422 1112 2689999975433 333345689999999
Q ss_pred cHHHHHHHHHHh----C-------CCC----eecCC--CCCCccccccCcCCCCCCCccccCchhhhee----eEEEEee
Q 009115 154 TLGQLYYRIAEK----S-------PNL----AFPAG--SCPSVGTGGHISGGGWGILLRKYGLAADNIV----DARMIDV 212 (543)
Q Consensus 154 ~~~~l~~~l~~~----g-------~~l----~~~~g--~~~~vgigG~~~ggg~G~~~~~~G~~~d~v~----~~~vV~~ 212 (543)
++.++.+.+.++ . ..| ....+ .-+..+|||.+..+.. .+...--++ .+++..+
T Consensus 81 t~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~ 154 (305)
T 3nvz_B 81 ALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSR 154 (305)
T ss_dssp BHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEET
T ss_pred cHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcC
Confidence 999998876531 0 000 00111 1134578898877643 233333333 5677777
Q ss_pred CCcEeeccCCCccchhheeccCCCCe---EEEEEEEEEEEe
Q 009115 213 QGRFLDRKSMGEDLFWAIRGGGGASF---GVIVAWKIKLVD 250 (543)
Q Consensus 213 ~G~~~~~~~~~~dl~~a~rG~g~g~~---Givt~~~lk~~p 250 (543)
+|+....-. .|+|-+++ ...+ -|||++.+...+
T Consensus 155 ~G~R~vp~~--~df~~g~~---~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 155 GTRRTVPMD--HTFFPSYR---KTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp TEEEEEECC--GGGCCSTT---CCSCCTTCEEEEEEEECCC
T ss_pred CCcEEEEee--hHhhcCcc---cccCCCCcEEEEEEecCCC
Confidence 785322211 15665443 1122 399999885443
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.97 E-value=0.13 Score=50.72 Aligned_cols=78 Identities=21% Similarity=0.301 Sum_probs=52.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHHHcCC-eEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccE-EEeCCCCEEEEeCCCcHH
Q 009115 79 PLVIITPIHVSHIQAAIKCSQKYGM-QIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSI-SIDVENKTAWVQVGATLG 156 (543)
Q Consensus 79 p~~vv~P~~~~dv~~~v~~a~~~~~-~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~v~v~~G~~~~ 156 (543)
|--+++|+|.+|..++++ +++- ...+.+|||+....- ..+......+||++++.++ .|..+.+.+++|+++++.
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~-k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~ 78 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEI-NDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFT 78 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHH-HTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHh-hcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHH
Confidence 456789999998777653 4433 467889999964210 0000013689999986544 344456799999999999
Q ss_pred HHHH
Q 009115 157 QLYY 160 (543)
Q Consensus 157 ~l~~ 160 (543)
+|.+
T Consensus 79 ~l~~ 82 (296)
T 3hrd_C 79 QIEN 82 (296)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.57 E-value=0.38 Score=48.05 Aligned_cols=75 Identities=16% Similarity=0.197 Sum_probs=53.2
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCC---CCcccCCCCCeEEEEeccC---ccEEEeCCCCEEEEe
Q 009115 77 PKPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEG---LSFRTSYNSPFVIIDMINL---SSISIDVENKTAWVQ 150 (543)
Q Consensus 77 ~~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g---~~~~~~~~~~givIdl~~~---~~i~~d~~~~~v~v~ 150 (543)
..|--++.|+|.+|..++++. . .-.+..||++... ..... ...+||++++ +.|+.+. ++.+++|
T Consensus 4 m~~f~y~~P~sl~ea~~ll~~---~--~a~~lAGGT~l~~~~k~~~~~----p~~lIdi~~i~eL~~I~~~~-~~~l~IG 73 (324)
T 1rm6_B 4 LTDFRTHRPATLADAVNALAA---E--ATLPLGAGTDLLPNLRRGLGH----PAALVDLTGIDGLATISTLA-DGSLRIG 73 (324)
T ss_dssp CCCCEEECCSSHHHHHHHTTS---T--TEEEESSCTTHHHHHHTTSCC----CSEEEECTTSTTTTCEEECT-TSCEEEE
T ss_pred CCceEEEccCCHHHHHHHHhC---C--CCEEEECchhHHHHHhccCCC----CCEEEECCCChhhcceEECC-CCeEEEc
Confidence 345568999999998888762 2 4778899998632 11112 3689999986 4555432 3479999
Q ss_pred CCCcHHHHHHH
Q 009115 151 VGATLGQLYYR 161 (543)
Q Consensus 151 ~G~~~~~l~~~ 161 (543)
+++++.+|.+.
T Consensus 74 A~vt~~~l~~~ 84 (324)
T 1rm6_B 74 AGATLEAIAEH 84 (324)
T ss_dssp TTCBHHHHHHC
T ss_pred cCCcHHHHHhC
Confidence 99999999763
No 36
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=76.59 E-value=1.1 Score=49.32 Aligned_cols=29 Identities=41% Similarity=0.617 Sum_probs=24.1
Q ss_pred hhhhhhhh-hhHHHHHHhhhccCCCCCccC
Q 009115 499 VWGKKYFN-HNFDRLVHVKTSVDPDNFFRN 527 (543)
Q Consensus 499 ~~~~~Yyg-~n~~RL~~IK~kyDP~nvF~~ 527 (543)
.|-..+|| ..++.|++||+.+||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 45566676 579999999999999999974
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=73.53 E-value=3 Score=49.49 Aligned_cols=81 Identities=6% Similarity=-0.040 Sum_probs=53.8
Q ss_pred CceEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCcccCCCCCeEEEEeccCccE-EEeCCCCEEEEeCCCcHH
Q 009115 78 KPLVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSFRTSYNSPFVIIDMINLSSI-SIDVENKTAWVQVGATLG 156 (543)
Q Consensus 78 ~p~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~v~v~~G~~~~ 156 (543)
.+...++|.|.+|+.++++. + -.-.+.+||++..-.-. ........+||++++.++ .|..+.+.+++|+++++.
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k-~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~ 306 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMK-FKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALS 306 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHH-HSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhh-cCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHH
Confidence 44568999999998887643 2 13467899998542110 000012579999985543 333345689999999999
Q ss_pred HHHHHHH
Q 009115 157 QLYYRIA 163 (543)
Q Consensus 157 ~l~~~l~ 163 (543)
+|.+.+.
T Consensus 307 ~l~~~l~ 313 (1332)
T 3unc_A 307 SVEKTLL 313 (1332)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988764
No 38
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=61.24 E-value=10 Score=40.53 Aligned_cols=25 Identities=20% Similarity=0.163 Sum_probs=21.0
Q ss_pred hhHHHHHHhhhccCCCCCccCCCCC
Q 009115 507 HNFDRLVHVKTSVDPDNFFRNEQSI 531 (543)
Q Consensus 507 ~n~~RL~~IK~kyDP~nvF~~~qsI 531 (543)
..++-+++||+.+||+|+|+-..-+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~ 547 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSG 547 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGG
T ss_pred HHHHHHHHHHHHcCccCCCCCCccc
Confidence 4688899999999999999866444
No 39
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=50.92 E-value=6.4 Score=41.29 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=24.6
Q ss_pred hhhhhhhhh-hhHHHHHHhhhccCCCCCccC
Q 009115 498 SVWGKKYFN-HNFDRLVHVKTSVDPDNFFRN 527 (543)
Q Consensus 498 ~~~~~~Yyg-~n~~RL~~IK~kyDP~nvF~~ 527 (543)
..|-...+| ..++-+++||+.+||+|+++-
T Consensus 442 ~~~l~~~~~~~~~~~m~~iK~~~DP~~ilNP 472 (476)
T 3pm9_A 442 RDELAEVKDKTAIELMRSIKALLDPHGIMNP 472 (476)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCTTSCBST
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 356666666 579999999999999999973
No 40
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=45.42 E-value=7.8 Score=41.57 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=20.6
Q ss_pred hhHHHHHHhhhccCCCCCccCC
Q 009115 507 HNFDRLVHVKTSVDPDNFFRNE 528 (543)
Q Consensus 507 ~n~~RL~~IK~kyDP~nvF~~~ 528 (543)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 7999999999999999999875
No 41
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=41.53 E-value=16 Score=43.35 Aligned_cols=76 Identities=11% Similarity=0.072 Sum_probs=49.9
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCC---CCCcccCCCCCeEEEEeccCccE-EEeCCCCEEEEeCCCcHH
Q 009115 81 VIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYE---GLSFRTSYNSPFVIIDMINLSSI-SIDVENKTAWVQVGATLG 156 (543)
Q Consensus 81 ~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~---g~~~~~~~~~~givIdl~~~~~i-~~d~~~~~v~v~~G~~~~ 156 (543)
..+.|.|.+|+.++..- .-+.+ +..|++... -.-... -.++|++.+..++ .|..+...+++|++|++.
T Consensus 242 ~w~~P~tl~el~~l~~~--~p~a~--lvaGnT~~gl~~~~~~~~----~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls 313 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMK--HPSAP--LVIGNTYLGLHMKFTDVS----YPIIISPARILELFVVTNTKQGLTLGTGLSLT 313 (1335)
T ss_dssp EEEECSSHHHHHHHHHH--CTTSC--BCSSCTTHHHHHC--CCC----CSEEECCTTCGGGSCEECCTTEEEEETTCBHH
T ss_pred eEecCCCHHHHHHHHHH--CCCCe--EEEecccceeeEeecCCC----CCeEEEcCcchhHheEEecCCEEEEcccCcHH
Confidence 46899999998886432 11334 445565532 111111 2588999876555 455566789999999999
Q ss_pred HHHHHHHH
Q 009115 157 QLYYRIAE 164 (543)
Q Consensus 157 ~l~~~l~~ 164 (543)
++.+.|.+
T Consensus 314 ~~~~~l~~ 321 (1335)
T 3zyv_A 314 QVKNVLSD 321 (1335)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888765
No 42
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=39.74 E-value=41 Score=28.16 Aligned_cols=37 Identities=11% Similarity=0.183 Sum_probs=32.5
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHHcCCeE-EEeeCCCC
Q 009115 77 PKPLVIITPIHVSHIQAAIKCSQKYGMQI-RVRSGGHD 113 (543)
Q Consensus 77 ~~p~~vv~P~~~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (543)
..+.+|+.+.+++|+.++.+.|++.|+|. .++-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 47899999999999999999999999996 56677765
No 43
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=38.90 E-value=14 Score=39.59 Aligned_cols=27 Identities=15% Similarity=0.058 Sum_probs=21.5
Q ss_pred hhhHHHHHHhhhccCCCCCccCCCCCCC
Q 009115 506 NHNFDRLVHVKTSVDPDNFFRNEQSIPP 533 (543)
Q Consensus 506 g~n~~RL~~IK~kyDP~nvF~~~qsI~~ 533 (543)
++... |++||+.+||+|+|+-..-+.|
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 33344 9999999999999997766655
No 44
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=35.83 E-value=60 Score=26.97 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=32.9
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHHcCCeE-EEeeCCCC
Q 009115 76 TPKPLVIITPIHVSHIQAAIKCSQKYGMQI-RVRSGGHD 113 (543)
Q Consensus 76 ~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (543)
...|..|+++.+++++.++.+.|++.|++. .++-.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 468999999999999999999999999996 56667763
No 45
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=35.37 E-value=63 Score=26.77 Aligned_cols=42 Identities=12% Similarity=0.263 Sum_probs=34.8
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHHcCCeE-EEeeCCCC
Q 009115 70 RFSTPATPKPLVIITPIHVSHIQAAIKCSQKYGMQI-RVRSGGHD 113 (543)
Q Consensus 70 r~~~~~~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (543)
+|. ....|..|+.+.+++++.++.+-|++.|++. .++-.|+.
T Consensus 48 ~W~--~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWL--HQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHH--HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 464 2468999999999999999999999999996 56667763
No 46
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=34.36 E-value=61 Score=26.63 Aligned_cols=38 Identities=13% Similarity=0.219 Sum_probs=31.3
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHHcCCeE-EEeeCCCC
Q 009115 76 TPKPLVIITPIHVSHIQAAIKCSQKYGMQI-RVRSGGHD 113 (543)
Q Consensus 76 ~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (543)
...|..|+.+.+++|+.++.+-|++.|++. .++-.|+.
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 468999999999999999999999999986 55556553
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=34.19 E-value=62 Score=26.67 Aligned_cols=38 Identities=11% Similarity=0.175 Sum_probs=32.8
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHHcCCeE-EEeeCCCC
Q 009115 76 TPKPLVIITPIHVSHIQAAIKCSQKYGMQI-RVRSGGHD 113 (543)
Q Consensus 76 ~~~p~~vv~P~~~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (543)
...|..|+.+.+++++.++.+-|++.|++. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 468999999999999999999999999996 55666664
No 48
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=32.43 E-value=15 Score=39.07 Aligned_cols=23 Identities=22% Similarity=0.353 Sum_probs=21.2
Q ss_pred hhhHHHHHHhhhccCCCCCccCC
Q 009115 506 NHNFDRLVHVKTSVDPDNFFRNE 528 (543)
Q Consensus 506 g~n~~RL~~IK~kyDP~nvF~~~ 528 (543)
|+|+..-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 49
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=32.04 E-value=17 Score=39.18 Aligned_cols=28 Identities=18% Similarity=0.449 Sum_probs=18.9
Q ss_pred hhhhhhh-hhHHHHHHhhhccCCCCCccC
Q 009115 500 WGKKYFN-HNFDRLVHVKTSVDPDNFFRN 527 (543)
Q Consensus 500 ~~~~Yyg-~n~~RL~~IK~kyDP~nvF~~ 527 (543)
|-...+| ..++-+++||+.+||+|+|+-
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 3344444 468999999999999999974
No 50
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=28.08 E-value=94 Score=25.55 Aligned_cols=36 Identities=14% Similarity=0.360 Sum_probs=31.3
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHHcCCeE-EEeeCCC
Q 009115 77 PKPLVIITPIHVSHIQAAIKCSQKYGMQI-RVRSGGH 112 (543)
Q Consensus 77 ~~p~~vv~P~~~~dv~~~v~~a~~~~~~v-~~~ggGh 112 (543)
..|.+|++..+++++.++.+-|++.|++. .++=.|+
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 46999999999999999999999999985 5666665
No 51
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=26.21 E-value=39 Score=20.69 Aligned_cols=20 Identities=15% Similarity=0.346 Sum_probs=16.6
Q ss_pred hhhhhHHHHHHhhhccCCCC
Q 009115 504 YFNHNFDRLVHVKTSVDPDN 523 (543)
Q Consensus 504 Yyg~n~~RL~~IK~kyDP~n 523 (543)
-|.+-++|-|||..|.+++.
T Consensus 9 aFadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 9 AFKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 34678999999999998764
No 52
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=26.15 E-value=1.1e+02 Score=26.65 Aligned_cols=40 Identities=18% Similarity=0.271 Sum_probs=33.5
Q ss_pred eEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCCc
Q 009115 80 LVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLSF 119 (543)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~ 119 (543)
...+.|.+.++|.++++.+.+.+.-+.+..||.+....+.
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~ 86 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQ 86 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcC
Confidence 4568899999999999999886688999999999765443
No 53
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=23.05 E-value=1.4e+02 Score=26.16 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=32.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHHc-CCeEEEeeCCCCCCCCC
Q 009115 80 LVIITPIHVSHIQAAIKCSQKY-GMQIRVRSGGHDYEGLS 118 (543)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~v~~~ggGh~~~g~~ 118 (543)
...+.|.+.++|.++++.+.+. +.-+.+..||.+....+
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D 85 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGD 85 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCC
Confidence 4568899999999999998886 68899999999876443
No 54
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.02 E-value=1.8e+02 Score=22.47 Aligned_cols=33 Identities=6% Similarity=0.129 Sum_probs=25.4
Q ss_pred EEEeCCCCEEEEeCCCcHHHHHHHHHHhCCCCe
Q 009115 138 ISIDVENKTAWVQVGATLGQLYYRIAEKSPNLA 170 (543)
Q Consensus 138 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~ 170 (543)
+++|...+.++|..-+...+|.+.+.+.|+...
T Consensus 49 v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~ 81 (98)
T 2crl_A 49 VEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAV 81 (98)
T ss_dssp EEEETTTTEEEEEESSCHHHHHHHHHTTTSCEE
T ss_pred EEEECCCCEEEEEEeCCHHHHHHHHHHhCCceE
Confidence 466777788888777788999999998876433
No 55
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=22.45 E-value=1.4e+02 Score=26.60 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=32.3
Q ss_pred eEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCCCCCCC
Q 009115 80 LVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHDYEGLS 118 (543)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~ 118 (543)
...+.|.+.++|.++++.+.+.+.-+.+..||.+....+
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D 105 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRD 105 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCcc
Confidence 455789999999999998876678899999999976543
No 56
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.28 E-value=1.4e+02 Score=26.31 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=32.2
Q ss_pred eEEEEcCCHHHHHHHHHHHHHc-CCeEEEeeCCCCCCCCC
Q 009115 80 LVIITPIHVSHIQAAIKCSQKY-GMQIRVRSGGHDYEGLS 118 (543)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~v~~~ggGh~~~g~~ 118 (543)
...+.|.+.++|.++++.+.+. +.-+.+..||.+....+
T Consensus 58 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~~D 97 (178)
T 2pjk_A 58 GYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSPTD 97 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence 4457899999999999988776 58899999999976543
No 57
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=21.21 E-value=33 Score=26.65 Aligned_cols=16 Identities=25% Similarity=0.563 Sum_probs=14.0
Q ss_pred hh-hhhHHHHHHhhhcc
Q 009115 504 YF-NHNFDRLVHVKTSV 519 (543)
Q Consensus 504 Yy-g~n~~RL~~IK~ky 519 (543)
+| .+|++||.++|+++
T Consensus 23 ~FT~eNl~kl~e~k~~~ 39 (84)
T 3fbi_A 23 FFTQSNLEKLPKYKEKK 39 (84)
T ss_dssp GCCHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHh
Confidence 44 79999999999887
No 58
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=20.97 E-value=1.6e+02 Score=25.46 Aligned_cols=40 Identities=15% Similarity=0.244 Sum_probs=32.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHH-cCCeEEEeeCCCCCCCCCc
Q 009115 80 LVIITPIHVSHIQAAIKCSQK-YGMQIRVRSGGHDYEGLSF 119 (543)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~-~~~~v~~~ggGh~~~g~~~ 119 (543)
...+.|.+.++|.++++.+.+ .+.-+.+..||.+....+.
T Consensus 48 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~ 88 (167)
T 1uuy_A 48 ATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDV 88 (167)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCc
Confidence 356889999999999999876 4788999999998765433
No 59
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=20.92 E-value=61 Score=32.46 Aligned_cols=28 Identities=11% Similarity=0.192 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEe--eCCCC
Q 009115 86 IHVSHIQAAIKCSQKYGMQIRVR--SGGHD 113 (543)
Q Consensus 86 ~~~~dv~~~v~~a~~~~~~v~~~--ggGh~ 113 (543)
=|.+|++++|++|+++||.|.+- .=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 58899999999999999999874 33565
No 60
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.77 E-value=1.7e+02 Score=25.34 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=31.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHHc-CCeEEEeeCCCCCCCC
Q 009115 80 LVIITPIHVSHIQAAIKCSQKY-GMQIRVRSGGHDYEGL 117 (543)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~-~~~v~~~ggGh~~~g~ 117 (543)
...+.|.+.++|.++++.+.+. +.-+.+..||.+..-.
T Consensus 39 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~ 77 (164)
T 2is8_A 39 AYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPR 77 (164)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTT
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCC
Confidence 4567899999999999998875 6889999999987643
No 61
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.67 E-value=1.2e+02 Score=23.04 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=28.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHHcCCeEEEeeCCCC
Q 009115 80 LVIITPIHVSHIQAAIKCSQKYGMQIRVRSGGHD 113 (543)
Q Consensus 80 ~~vv~P~~~~dv~~~v~~a~~~~~~v~~~ggGh~ 113 (543)
.+|-...+.+||..+++-.+.+|.|+++.-.|-+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 3456778999999999999999999998877765
Done!