RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 009116
(543 letters)
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 46.6 bits (110), Expect = 2e-05
Identities = 94/580 (16%), Positives = 163/580 (28%), Gaps = 207/580 (35%)
Query: 14 SMLSSDHKSVVSMNLFV-ALLCACIVIGHLLEENRWMNESITALIIGLCTGIVILLTT-- 70
+L + ++V + + A I+ ++ S AL + G L+
Sbjct: 107 KLLQENDTTLVKTKELIKNYITARIMAKRPFDKKS---NS--ALFRAVGEGNAQLVAIFG 161
Query: 71 -NGTSSHVLMFSE--DLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFVI 127
G + F E DL+ Y ++ + + TL +
Sbjct: 162 GQGNTDDY--FEELRDLYQTY--HVLV---------GDLIKF--------SAETLSELIR 200
Query: 128 ISAGAVHFFKQMNIGTLKIGDYLAIGAIFAATDSVCTLQVLNQDETP----LLYSLVFGE 183
+ A F Q L I ++L N TP LL +
Sbjct: 201 TTLDAEKVFTQ----GLNILEWLE-----------------NPSNTPDKDYLLSIPI--- 236
Query: 184 GVVNDATSVVLFNAIQSFDLSHINLSIALKFVG----SFFYLFIASTMLGVIAGLLSAFI 239
S L IQ L+H + K +G +T G GL++A
Sbjct: 237 -------SCPLIGVIQ---LAHY--VVTAKLLGFTPGELRSYLKGAT--GHSQGLVTAVA 282
Query: 240 IKKLYMGRHSTDREVALMILMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSR 299
I + E + + ++ + FF G V +
Sbjct: 283 I------AETDSWESFFVSVRKAITVL-------------FFIG-VRCY----------- 311
Query: 300 VTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRVVRDSPGKSVGVSAILLGLVLLGRAAF 359
A+ S I + DS + GV +
Sbjct: 312 ----EAYPNTSLPPSI------------------LEDSLENNEGVPS------------- 336
Query: 360 VFP-LSFLSNLTKKSSHEKIG-LKQQLTIWWAGLMRGAVSMAL--AYKQFTSSGH----- 410
P LS +SNLT++ + + L V ++L K SG
Sbjct: 337 --PMLS-ISNLTQEQVQDYVNKTNSHLP------AGKQVEISLVNGAKNLVVSGPPQSLY 387
Query: 411 ---TKLHGNAIMITSTITVVLFS------TVVFGLMTQPLVRILL-PSSKNLSRML--SD 458
L + + FS + F + P LL P+S +++ L ++
Sbjct: 388 GLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNN 447
Query: 459 ESSTPKSFIVPLLGNGQGSEADLKT--PNVTRPTSLRMLLATPSHTVHHYWRKFDDAFMR 516
S K +P+ GS DL+ +++ + ++ P V W +
Sbjct: 448 VSFNAKDIQIPVYDTFDGS--DLRVLSGSIS-ERIVDCIIRLP---VK--WETTTQ--FK 497
Query: 517 P----VFG----------------GRGFVPVVPGSPLEQS 536
FG G G V V+ L+ +
Sbjct: 498 ATHILDFGPGGASGLGVLTHRNKDGTG-VRVIVAGTLDIN 536
Score = 46.2 bits (109), Expect = 3e-05
Identities = 81/560 (14%), Positives = 151/560 (26%), Gaps = 209/560 (37%)
Query: 67 LLTTNGTSSHVLMFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFV 126
L ++G+ HVL+ FF Q++++
Sbjct: 9 LTLSHGSLEHVLLVPTASFF----------IASQLQEQ---------------------- 36
Query: 127 IISAGAVHFFKQMNIGTLKIGDYLAIGAIFAATDSVCTLQVLNQDETPL----LYS--LV 180
F K + T+ D+ P L L
Sbjct: 37 --------FNKILP----------------EPTEG------FAADDEPTTPAELVGKFLG 66
Query: 181 FGEGVVND----ATSVVLFNAIQSFD---LSHINL-SIALKFVGSFFYLFIASTMLGVIA 232
+ +V VL + F+ L ++ ++A K + T L
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQE------NDTTLVKTK 120
Query: 233 GLLSAFIIKKLYMGRHSTDREV------ALM--------ILMA-------YLSYM--LAE 269
L+ + R R AL L+A Y L +
Sbjct: 121 ELIKNY-----ITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRD 175
Query: 270 LF--YLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALD 327
L+ Y ++ + S T + L ++ L+
Sbjct: 176 LYQTY-HVLVGDLI--------------KFSAET----LSELIRTTLDAEKVFT--QGLN 214
Query: 328 IEKW-RVVRDSPGK----SVGVSAILLGLVLLG------RAAFVFPLSFLSNLTKKSSHE 376
I +W ++P K S+ +S L+G++ L + P S L + H
Sbjct: 215 ILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHS 274
Query: 377 KIGLKQQLTIWWAGLMRGAVSMALAYKQFTSSGHTKL----------HGNAIMITSTITV 426
+ GL + A++ +++ F S + + + ++
Sbjct: 275 Q-GL----------VTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSI 323
Query: 427 VLFST-----------VVFGLMTQPLVRIL------LPSSKNLSRMLSDESSTPKSFIVP 469
+ S + L + + + LP+ K + L + K+ +V
Sbjct: 324 LEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVN---GAKNLVV- 379
Query: 470 LLGNGQGSEADLKTPNVTRPTSLRMLLATPS---HTVHHYWRKFDDAFMRPVFGGRGFVP 526
G L N +LR A + RK F R F+P
Sbjct: 380 -----SGPPQSLYGLN----LTLRKAKAPSGLDQSRIPFSERK-------LKFSNR-FLP 422
Query: 527 V-VP-GSP-LEQSVHQWQQE 543
V P S L + ++
Sbjct: 423 VASPFHSHLLVPASDLINKD 442
>2k3c_A TMIX peptide; membrane peptide, dodecylphosphocholine micelle,
NHE1, Na+/H+ transporter, metal transport; NMR
{Synthetic}
Length = 33
Score = 38.2 bits (88), Expect = 2e-04
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 261 AYLSYMLAELFYLSGILTVFFCGIVM 286
+Y++Y+ AELF+LSGI+ + G+VM
Sbjct: 3 SYMAYLSAELFHLSGIMALIASGVVM 28
>1y4e_A Sodium/hydrogen exchanger 1; NHE1 isoform, transmembrane,
membrane protein; HET: HSL; NMR {Homo sapiens}
Length = 27
Score = 32.1 bits (73), Expect = 0.020
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 79 MFSEDLFFIYLLPPIIFNAGF 99
D+FF++LLPPII +AG+
Sbjct: 1 FLQSDVFFLFLLPPIILDAGY 21
>2htg_A NHE-1, NHE1 isoform of Na+/H+ exchanger 1, solute; membrane
protein, transmembrane segment, helix-KINK-helix; NMR
{Synthetic}
Length = 28
Score = 29.6 bits (66), Expect = 0.16
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 175 LLYSLVFGEGVVNDATSVVLF 195
LL+ LVFGE ++NDA +VVL+
Sbjct: 5 LLHILVFGESLLNDAVTVVLY 25
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function
initiative, isomerase; 2.00A {Pectobacterium carotovorum
subsp}
Length = 426
Score = 32.2 bits (74), Expect = 0.39
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDS---PGKSVGVSAI 347
S++ + +G DA IE W+ V +SAI
Sbjct: 61 RELPVASYLNDHVCPQLIGRDAHQIEDIWQYFYKGAYWRRGPVTMSAI 108
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold,
mannonate dehydratase, D-mannonate, lyase; HET: CS2;
1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A
2qjn_A* 2qjm_A*
Length = 418
Score = 31.8 bits (73), Expect = 0.61
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDS---PGKSVGVSAI 347
+ ++++ E +GMD IE W+ V V + AI
Sbjct: 55 RELSVVAYLQEHVAPCLIGMDPRRIEDIWQYVYRGAYWRRGPVTMRAI 102
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme
function initiative, lyase; 1.45A {Caulobacter
crescentus} PDB: 4fi4_A 3thu_A
Length = 425
Score = 31.8 bits (73), Expect = 0.62
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDSP---GKSVGVSAI 347
+ +SF+ + + +G DA IE W+ G V ++A+
Sbjct: 62 RELSVVSFLQDHMVPSLIGRDAHQIEDIWQFFYRGSYWRGGPVAMTAL 109
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function
initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio
japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A*
3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Length = 424
Score = 30.7 bits (70), Expect = 1.2
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDSP---GKSVGVSAI 347
+ +S++ + I + +G D IE W+ VG++A+
Sbjct: 61 REKSVVSYLEDYLIPVLIGRDPQQIEDIWQFFYRGAYWRRGPVGMTAL 108
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold,
acid sugar dehydratase, D-araninonate, isomera; HET: EPE
D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A
3dfh_A 3s47_A 3gy1_A
Length = 401
Score = 30.7 bits (70), Expect = 1.3
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDS---PGKSVGVSAI 347
A + V E + +G +A +IE W+++ + V +AI
Sbjct: 45 RPLAVKTMVDEYLKPILIGKNANNIEDLWQMMMVNAYWRNGPVINNAI 92
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein;
enolase, dehydratase, enzyme function initiative, EFI,
lyase; 1.80A {Enterobacter SP}
Length = 422
Score = 30.7 bits (70), Expect = 1.4
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDSP---GKSVGVSAI 347
A + V E L +G DA +IE W+++ + + +AI
Sbjct: 66 RPLAVKTLVDEYLQPLMIGRDANNIEDLWQMMNVNAYWRNGPLMNNAI 113
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate
dehydratase related protein, enzyme funct intitiative,
lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis}
PDB: 3tw9_A 3twa_A 3twb_A*
Length = 440
Score = 30.4 bits (69), Expect = 1.7
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDS---PGKSVGVSAI 347
+A S + E +G D IE W+ S V +A+
Sbjct: 67 RIYAVQSAIDEYLAPFLIGKDPARIEDIWQSAAVSGYWRNGPVMNNAL 114
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily,
NYSGXRC, target 9265J, lyase, structural genomics,
PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Length = 455
Score = 29.7 bits (67), Expect = 3.0
Identities = 7/46 (15%), Positives = 14/46 (30%), Gaps = 5/46 (10%)
Query: 307 ATLSFVAEIFIFLYVGMDALDIEK-----WRVVRDSPGKSVGVSAI 347
V + F +G D + +R K + ++ I
Sbjct: 88 PACWLVHQHFERFLIGADPRNTNLLFEQMYRASMFYGRKGLPIAVI 133
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis;
HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB:
2ze5_A* 2ze7_A* 2ze8_A
Length = 253
Score = 29.0 bits (65), Expect = 3.0
Identities = 3/20 (15%), Positives = 9/20 (45%)
Query: 127 IISAGAVHFFKQMNIGTLKI 146
+++ V Q+ G+ +
Sbjct: 29 VVALDRVQCCPQIATGSGRP 48
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW
YORK structura genomics research consortium, TIM barrel;
HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A
3t9p_A 3t8q_A
Length = 388
Score = 29.5 bits (67), Expect = 3.1
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Query: 300 VTTKHAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDSP---GKSVGVSAI 347
V+T HA T + + +G D D++ +V + S A+
Sbjct: 53 VSTYHADITCTVLHRQVAPWMLGQDITDLDDLLDIVTEREHKFPGSYLRRAM 104
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure
initiative, NEW YORK SGX research center for structural
genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Length = 410
Score = 29.6 bits (67), Expect = 3.3
Identities = 10/52 (19%), Positives = 15/52 (28%), Gaps = 5/52 (9%)
Query: 301 TTKHAFATLSFVAEIFIFLYVGMDALDIEK-----WRVVRDSPGKSVGVSAI 347
T + A A + + E +G A +I S V A
Sbjct: 37 TFRGAQAVEAVLHEQTAPAIIGRAAENITSISSELLNPYVGFGSSSAEVRAA 88
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase,
aldolase, structural genomics, biology; 1.35A
{Unidentified}
Length = 412
Score = 29.2 bits (66), Expect = 3.7
Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 5/51 (9%)
Query: 302 TKHAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDSP----GKSVGVSAI 347
T A + ++F + D +E+ +R S + +
Sbjct: 44 TFGPKAMAPIIDDVFERHLLNRDPHHVERLFRQAYSSGFTQRPDLTMMGVV 94
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta
protein, structural genomics, PSI-2; 2.70A
{Staphylococcus epidermidis atcc 12228}
Length = 340
Score = 29.1 bits (66), Expect = 4.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 127 IISAGAVHFFKQMNIGTLKI 146
IIS ++ ++ M+IGT K+
Sbjct: 35 IISGDSMQVYQGMDIGTAKV 54
>2gl5_A Putative dehydratase protein; structural genomics, protein
structure initiati nysgxrc; 1.60A {Salmonella
typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Length = 410
Score = 28.8 bits (65), Expect = 4.6
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Query: 319 LYVGMDALDIEK-WRVVRDS-----PGKSVGVSAI 347
L VG D L+IEK W G +V + +
Sbjct: 65 LIVGEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGM 99
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation,
ATP-binding, cytoplasm, mitochondrion,
nucleotide-binding, nucleus; 2.95A {Saccharomyces
cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Length = 409
Score = 28.8 bits (65), Expect = 4.8
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 127 IISAGAVHFFKQMNIGTLKI 146
+I++ ++ +K + I T K
Sbjct: 30 VINSDSMQVYKDIPIITNKH 49
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta
protein, structural genomics, PSI-2, protein structure
initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Length = 322
Score = 28.6 bits (65), Expect = 4.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 127 IISAGAVHFFKQMNIGTLKI 146
+IS ++ ++ M+IGT KI
Sbjct: 31 VISGDSMQVYRGMDIGTAKI 50
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium
binding site, lyase; 1.95A {Ralstonia pickettii} PDB:
3rra_A
Length = 405
Score = 28.8 bits (65), Expect = 5.1
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDS---PGKSVGVSAI 347
A + V E+ +L +G D I W+ + + G + +SAI
Sbjct: 38 RARTVEAAVHELSDYL-IGQDPSRINDLWQTMYRAGFYRGGPILMSAI 84
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics,
isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB:
2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Length = 409
Score = 28.8 bits (65), Expect = 5.5
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 5/48 (10%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDSP---GKSVGVSAI 347
+ + + ++ L VG ++ E+ + V I
Sbjct: 42 GSPGVTAVIEQLGKRL-VGASVMEHERFFAEAYCLTRPATGGVVSEGI 88
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily
member, M-xylarate, U function; HET: DXL; 1.30A
{Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Length = 389
Score = 28.4 bits (64), Expect = 5.9
Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 7/51 (13%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRV------VRDSPGKSVGVSAI 347
+ ++ +G D +I W R+ +SVG++A+
Sbjct: 57 DLAVLKRAIEDVIGPQLIGEDPANINYLWHKVFHGEVSRNLGHRSVGIAAM 107
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein;
structural genomics, protein structure initiative; HET:
RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Length = 433
Score = 28.5 bits (64), Expect = 6.2
Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 5/51 (9%)
Query: 302 TKHAFATLSFVAEIFIFLYVGMDALDIEK-WRVV----RDSPGKSVGVSAI 347
+ A + + ++F G + +IE +R V + A
Sbjct: 45 SVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAF 95
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural
genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2;
HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB:
2oz3_A*
Length = 404
Score = 28.4 bits (64), Expect = 7.1
Identities = 7/41 (17%), Positives = 13/41 (31%), Gaps = 5/41 (12%)
Query: 312 VAEIFIFLYVGMDALDIEK-----WRVVRDSPGKSVGVSAI 347
V + G DIE+ + K + ++ I
Sbjct: 87 VEKHLARFLEGARVTDIERIWDQMYNSTLYYGRKGLVINTI 127
>2o56_A Putative mandelate racemase; dehydratase, structural genomics,
protein structure initiati 2; 2.00A {Salmonella
typhimurium}
Length = 407
Score = 28.4 bits (64), Expect = 7.4
Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 307 ATLSFVAEIFIFLYVGMDALDIEK-WRVVRDS-----PGKSVGVSAI 347
+ +A+ + +GMD ++ E W + G + +A+
Sbjct: 53 SAGIGMAKDLSAIIIGMDPMNNEAIWEKMLKKTFWGQGGGGIFSAAM 99
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase,
mandelate racemase subgroup, enzyme function initia EFI;
1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Length = 400
Score = 28.0 bits (63), Expect = 9.4
Identities = 8/48 (16%), Positives = 14/48 (29%), Gaps = 4/48 (8%)
Query: 304 HAFATLSFVAEIFIFLYVGMDALDIEK-WRVVRDS---PGKSVGVSAI 347
A ++V E +G D L I+ + + V
Sbjct: 37 GAETVETYVHEYIAPRVIGRDPLQIDLLAQDLVGYLGFRSSGAEVRGN 84
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.327 0.139 0.408
Gapped
Lambda K H
0.267 0.0747 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,038,026
Number of extensions: 488203
Number of successful extensions: 1199
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1193
Number of HSP's successfully gapped: 52
Length of query: 543
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 445
Effective length of database: 3,965,535
Effective search space: 1764663075
Effective search space used: 1764663075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (26.9 bits)